Citrus Sinensis ID: 010932
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 497 | 2.2.26 [Sep-21-2011] | |||||||
| Q944A7 | 512 | Probable serine/threonine | no | no | 0.911 | 0.884 | 0.645 | 0.0 | |
| Q9FHD7 | 487 | Probable serine/threonine | no | no | 0.973 | 0.993 | 0.579 | 1e-169 | |
| Q7XJT7 | 465 | Probable inactive recepto | no | no | 0.931 | 0.995 | 0.441 | 1e-114 | |
| P46573 | 412 | Protein kinase APK1B, chl | no | no | 0.575 | 0.694 | 0.331 | 9e-39 | |
| O49839 | 426 | Protein kinase 2A, chloro | no | no | 0.589 | 0.687 | 0.321 | 3e-37 | |
| Q06548 | 410 | Protein kinase APK1A, chl | no | no | 0.563 | 0.682 | 0.321 | 3e-37 | |
| Q8H186 | 389 | Probable receptor-like pr | no | no | 0.563 | 0.719 | 0.326 | 2e-36 | |
| O49840 | 426 | Protein kinase 2B, chloro | no | no | 0.563 | 0.657 | 0.314 | 9e-36 | |
| Q9SFT7 | 414 | Serine/threonine-protein | no | no | 0.591 | 0.710 | 0.326 | 1e-35 | |
| P43293 | 389 | Probable serine/threonine | no | no | 0.575 | 0.735 | 0.321 | 4e-35 |
| >sp|Q944A7|Y4523_ARATH Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 637 bits (1644), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 295/457 (64%), Positives = 375/457 (82%), Gaps = 4/457 (0%)
Query: 43 VPAFKEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDP 102
+P+F EF ADL+AATN FSS+ IVSESG+KAPN+VY+GRL+N R +A+K+F++ +WP+P
Sbjct: 55 IPSFSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMAWPEP 114
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
QF EA G+G +RH RL NLIG C +GDERLLVA++MPNDTL+KHLFHW+ Q + W MR
Sbjct: 115 KQFAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMR 174
Query: 163 VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA 222
+RV YYIA+ALD+C+++ R LYHDLNAYRVLFDEDGDPRLS FGLMKNSRDGKSYSTNLA
Sbjct: 175 LRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLA 234
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282
YTPPE+LR GRV PESV YS+GTVLLDLLSGKHIPPSHALD+IRGKN++LLMDS LEG++
Sbjct: 235 YTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKF 294
Query: 283 ANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSK---APVVL 339
+ E+AT +VELAS+CLQYE ++RP+ K L++ +APLQ +++V S+V++G+ K AP
Sbjct: 295 STEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPSTP 354
Query: 340 PTMLSSLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIA 399
LS LG+AC+RMDLTA+H IL+ T Y+D+EG NELSFQEWTQQ++DML+ +K GD +
Sbjct: 355 QRPLSPLGEACSRMDLTAIHQILVMTHYRDDEGT-NELSFQEWTQQMKDMLDARKRGDQS 413
Query: 400 FRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPT 459
FR+KDFK AI+ YS+ + + ++ S TVF RR+L YL+ +Q + ALRDAMQAQ P+WPT
Sbjct: 414 FREKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPDWPT 473
Query: 460 AFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSWR 496
AFYMQ++AL KL M TDA DMLN+ A E K+Q R
Sbjct: 474 AFYMQSVALAKLNMNTDAADMLNEAAQLEEKRQRGGR 510
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9FHD7|Y5126_ARATH Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 596 bits (1537), Expect = e-169, Method: Compositional matrix adjust.
Identities = 284/490 (57%), Positives = 372/490 (75%), Gaps = 6/490 (1%)
Query: 2 MGCFQSKTAHLASPDKEAPEAKPDLGEGEGEGEGEEGEEEQVPAFKEFVLADLRAATNGF 61
MGC SK + L E+ + PD+ + EG GE + +P F+EF + +R AT+GF
Sbjct: 1 MGCEVSKLSALCCV-SESGRSNPDVTGLDEEGRGESND---LPQFREFSIETIRNATSGF 56
Query: 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLV 121
++E IVSE G++APNVVY+G+L+N R +A+KRF+R+SWPD QF+ EA +G +R+ R+
Sbjct: 57 AAENIVSEHGERAPNVVYKGKLENQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMA 116
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNR 181
NL+GCC E +ERLL+A++MPN+TL+KHLFHW+ QP+ W MR+RVA +IAQAL++C S+ R
Sbjct: 117 NLLGCCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGR 176
Query: 182 KLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIY 241
LYHDLNAYRVLFD+D +PRLS FGLMKNSRDGKSYSTNLA+TPPE+LRTGRV PESVIY
Sbjct: 177 ALYHDLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIY 236
Query: 242 SYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYE 301
S+GT+LLDLLSGKHIPPSHALD+IR +N+ +LMDS LEGQ++++D T+L+ LAS+CLQYE
Sbjct: 237 SFGTLLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYE 296
Query: 302 AKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSKAPVVLPTMLSSLGKACARMDLTAVHDI 361
++RP+ K L+SA+ PLQK E+ASH L+G+ + T LS LG+AC R DLTA+H+I
Sbjct: 297 PRERPNPKSLVSAMIPLQKDLEIASHQLLGVPNSATT--TALSPLGEACLRSDLTAIHEI 354
Query: 362 LLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSV 421
+ K GYKD+EGA ELSFQ WT Q+QD L KK GD AFR KDF AIE YS+ + + ++
Sbjct: 355 IEKLGYKDDEGATTELSFQMWTDQMQDTLVFKKKGDSAFRHKDFAKAIECYSQFIEVGTM 414
Query: 422 PSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDML 481
S TV R++L YLM + AL +AMQAQV P W A Y+QA+AL+ LG E +A L
Sbjct: 415 GSPTVHARQSLCYLMNDMPREALNNAMQAQVISPAWHIASYLQAVALSALGQENEAHTAL 474
Query: 482 NDGASFEAKK 491
DGA E+K+
Sbjct: 475 KDGAMLESKR 484
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q7XJT7|SSP_ARATH Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1 | Back alignment and function description |
|---|
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/492 (44%), Positives = 311/492 (63%), Gaps = 29/492 (5%)
Query: 2 MGCFQSKTAHLASPDKEAPEAKPDLGEGEGEGEGEEGEEEQVPAFKEFVLADLRAATNGF 61
MGC S ++ + +A + G GE P +F + L+ ATN F
Sbjct: 1 MGCCYSLSSTVDPVQDHTTDASSEPRNGGGED----------PPLTKFSFSALKTATNHF 50
Query: 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLV 121
S E IVS D+ +VV++GRL+N VAIKRF+ +W DP F+ EA +G +RHKRLV
Sbjct: 51 SPENIVS---DQTSDVVFKGRLQNGGFVAIKRFNNMAWSDPKLFLEEAQRVGKLRHKRLV 107
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNR 181
NLIG C +GD+R LVA +M NDTL+K LF Q + W +R+RVAY++A+ALD+CN+
Sbjct: 108 NLIGYCCDGDKRFLVADFMANDTLAKRLFQRKYQTMDWSIRLRVAYFVAEALDYCNTAGF 167
Query: 182 KLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIY 241
Y++L+AY+VLFDEDGD LS FGLMK + + + TG V PE+VIY
Sbjct: 168 ASYNNLSAYKVLFDEDGDACLSCFGLMKEINNDQ-------------ITTGSVNPENVIY 214
Query: 242 SYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYE 301
+GTVL++LLSGK IPPSHA ++I KN+ LMD L+G+++ ++A + +LAS+CL+YE
Sbjct: 215 RFGTVLVNLLSGKQIPPSHAPEMIHRKNVFKLMDPYLKGKFSIDEANVVYKLASQCLKYE 274
Query: 302 AKDRPDVKFLLSAVAPLQKQTEVASH--VLMGLSKAPVVLPTMLSSLGKACARMDLTAVH 359
++ P+ K +++ + LQ +TE S+ V M + + LS LG+AC RMDL ++H
Sbjct: 275 GQESPNTKEIVATLETLQTRTEAPSYEVVEMTNQEKDASSSSNLSPLGEACLRMDLASIH 334
Query: 360 DILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMM 419
IL+ GY D++ ELSF+EW Q+V+++ + ++ GD AF ++DFK AI YS+ V
Sbjct: 335 SILVLAGYDDDKDII-ELSFEEWIQEVKELQDVRRNGDRAFVEQDFKTAIACYSQFVEER 393
Query: 420 SVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQD 479
S+ +V+ RR+LSYL ++ E AL D M AQ P+WPTAFY+Q++AL KL M TD+ D
Sbjct: 394 SLVYPSVYARRSLSYLFCDEPEKALLDGMHAQGVFPDWPTAFYLQSVALAKLDMNTDSAD 453
Query: 480 MLNDGASFEAKK 491
L + A E KK
Sbjct: 454 TLKEAALLEVKK 465
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Probable inactive protein kinase that activates the YODA MAP kinase cascade, regulating the asymmetric first division, and thus embryo polarity. Acts as an adapter at the plasma membrane, possibly recruiting an activator. Arabidopsis thaliana (taxid: 3702) |
| >sp|P46573|APK1B_ARATH Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2 | Back alignment and function description |
|---|
Score = 161 bits (408), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 165/320 (51%), Gaps = 34/320 (10%)
Query: 37 EGEEEQVPAFKEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRL-------- 88
EGE Q P K F A+L+AAT F + ++ E G + V++G + L
Sbjct: 45 EGEILQSPNLKSFTFAELKAATRNFRPDSVLGEGGFGS---VFKGWIDEQTLTASKPGTG 101
Query: 89 --VAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLS 146
+A+K+ ++ W +++ E LG H LV LIG C E + RLLV ++MP +L
Sbjct: 102 VVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLE 161
Query: 147 KHLFHWDK--QPLPWEMRVRVAYYIAQALDHC-NSQNRKLYHDLNAYRVLFDEDGDPRLS 203
HLF QPL W +R++VA A+ L N++ +Y D +L D + + +LS
Sbjct: 162 NHLFRRGSYFQPLSWTLRLKVALGAAKGLAFLHNAETSVIYRDFKTSNILLDSEYNAKLS 221
Query: 204 SFGLMKNSRDG-KSY-STNL----AYTPPEFLRTGRVIPESVIYSYGTVLLDLLSG---- 253
FGL K+ G KS+ ST + Y PE+L TG + +S +YSYG VLL++LSG
Sbjct: 222 DFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAV 281
Query: 254 -KHIPPSHALDV-------IRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDR 305
K+ PP V + L ++D+ L+ QY+ E+A ++ LA +CL +E K R
Sbjct: 282 DKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLR 341
Query: 306 PDVKFLLSAVAPLQKQTEVA 325
P++ ++S + +Q E
Sbjct: 342 PNMNEVVSHLEHIQTLNEAG 361
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Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49839|APK2A_ARATH Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 168/345 (48%), Gaps = 52/345 (15%)
Query: 37 EGEEEQVPAFKEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRL-------- 88
EGE P K F +L+ AT F + ++ E G V++G + L
Sbjct: 62 EGEILSSPNLKAFTFNELKNATKNFRQDNLLGEGGF---GCVFKGWIDQTSLTASRPGSG 118
Query: 89 --VAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLS 146
VA+K+ + + +++TE LG + H LV L+G CAEG+ RLLV ++MP +L
Sbjct: 119 IVVAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLE 178
Query: 147 KHLFHWDKQPLPWEMRVRVAYYIAQALDHCN-SQNRKLYHDLNAYRVLFDEDGDPRLSSF 205
HLF QPL W +R++VA A+ L + ++++ +Y D A +L D D + +LS F
Sbjct: 179 NHLFRRGAQPLTWAIRMKVAVGAAKGLTFLHEAKSQVIYRDFKAANILLDADFNAKLSDF 238
Query: 206 GLMKN--SRDGKSYSTNL----AYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPS 259
GL K + D ST + Y PE++ TGR+ +S +YS+G VLL+L+SG+
Sbjct: 239 GLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGR----- 293
Query: 260 HALDVIRGKN-----------------LLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302
A+D G N L +MD+ L GQY + A LA +CL +A
Sbjct: 294 RAMDNSNGGNEYSLVDWATPYLGDKRKLFRIMDTKLGGQYPQKGAFTAANLALQCLNPDA 353
Query: 303 KDRPDVKFLL-------SAVAPLQKQTEVAS---HVLMGLSKAPV 337
K RP + +L S P K T++ S H + K+PV
Sbjct: 354 KLRPKMSEVLVTLEQLESVAKPGTKHTQMESPRFHHSSVMQKSPV 398
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q06548|APK1A_ARATH Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 166/314 (52%), Gaps = 34/314 (10%)
Query: 37 EGEEEQVPAFKEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRL-------- 88
EGE Q P K F A+L++AT F + ++ E G V++G + L
Sbjct: 44 EGEILQSPNLKSFSFAELKSATRNFRPDSVLGEGGF---GCVFKGWIDEKSLTASRPGTG 100
Query: 89 --VAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLS 146
+A+K+ ++ W +++ E LG H+ LV LIG C E + RLLV ++MP +L
Sbjct: 101 LVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLE 160
Query: 147 KHLFHWDK--QPLPWEMRVRVAYYIAQALDHCN-SQNRKLYHDLNAYRVLFDEDGDPRLS 203
HLF QPL W++R++VA A+ L + S+ R +Y D +L D + + +LS
Sbjct: 161 NHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLHSSETRVIYRDFKTSNILLDSEYNAKLS 220
Query: 204 SFGLMKNSRDG-KSY-STNL----AYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHI- 256
FGL K+ G KS+ ST + Y PE+L TG + +S +YS+G VLL+LLSG+
Sbjct: 221 DFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAV 280
Query: 257 ---PPSHALD--------VIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDR 305
PS + ++ + + ++D+ L+ QY+ E+A ++ L+ +CL E K R
Sbjct: 281 DKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLR 340
Query: 306 PDVKFLLSAVAPLQ 319
P++ ++S + +Q
Sbjct: 341 PNMSEVVSHLEHIQ 354
|
Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8H186|Y3545_ARATH Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 161/315 (51%), Gaps = 35/315 (11%)
Query: 37 EGEEEQVPAFKEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRL-------- 88
EGE K F +L+ AT F S+ +V E G V+RG L L
Sbjct: 37 EGEILSSTTVKSFSFNELKLATRNFRSDSVVGEGG---FGCVFRGWLDETTLTPTKSSSG 93
Query: 89 --VAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLS 146
+A+KR + + +++TE LG + H LV LIG C E ++RLLV ++M +L
Sbjct: 94 LVIAVKRLNPDGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLE 153
Query: 147 KHLF---HWDKQPLPWEMRVRVAYYIAQALDHCNSQNRK-LYHDLNAYRVLFDEDGDPRL 202
HLF + D +PL W +R++VA A+ L +S K +Y D+ A +L D D + +L
Sbjct: 154 NHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHSDPVKVIYRDIKASNILLDSDFNAKL 213
Query: 203 SSFGLMKNSRDG-KSYST-----NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGK-- 254
S FGL ++ G +SY + Y PE++ TG + S +YS+G VLL+LL G+
Sbjct: 214 SDFGLARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQA 273
Query: 255 --HIPPSHALDVI--------RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKD 304
H P+ +++ + +LL++D+ L QY E A +L +A +CL +E K
Sbjct: 274 LDHNRPAKEQNLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKS 333
Query: 305 RPDVKFLLSAVAPLQ 319
RP + ++ A+ LQ
Sbjct: 334 RPTMDQVVRALVQLQ 348
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49840|APK2B_ARATH Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1 | Back alignment and function description |
|---|
Score = 152 bits (383), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 157/312 (50%), Gaps = 32/312 (10%)
Query: 37 EGEEEQVPAFKEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRL-------- 88
EGE P K F +L+ AT F + ++ E G V++G + L
Sbjct: 59 EGEILSSPNLKAFTFNELKNATRNFRPDSLLGEGGF---GYVFKGWIDGTTLTASKPGSG 115
Query: 89 --VAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLS 146
VA+K+ + + +++TE LG + H LV L+G C EG+ RLLV ++MP +L
Sbjct: 116 IVVAVKKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLE 175
Query: 147 KHLFHWDKQPLPWEMRVRVAYYIAQALDHC-NSQNRKLYHDLNAYRVLFDEDGDPRLSSF 205
HLF QPL W +R++VA A+ L +++++ +Y D A +L D + + +LS F
Sbjct: 176 NHLFRRGAQPLTWAIRMKVAIGAAKGLTFLHDAKSQVIYRDFKAANILLDAEFNSKLSDF 235
Query: 206 GLMKN--SRDGKSYSTNL----AYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPS 259
GL K + D ST + Y PE++ TGR+ +S +YS+G VLL+LLSG+
Sbjct: 236 GLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDK 295
Query: 260 HALDVIRG------------KNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPD 307
+ + + + L +MD+ L GQY + A LA +CL +AK RP
Sbjct: 296 SKVGMEQSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASLALQCLNPDAKLRPK 355
Query: 308 VKFLLSAVAPLQ 319
+ +L+ + L+
Sbjct: 356 MSEVLAKLDQLE 367
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SFT7|Y3707_ARATH Serine/threonine-protein kinase At3g07070 OS=Arabidopsis thaliana GN=At3g07070 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 165/331 (49%), Gaps = 37/331 (11%)
Query: 16 DKEAPEAKPDLGEGEGEGEGEEGEEEQVPAFKEFVLADLRAATNGFSSELIVSESGDKAP 75
+K PE + E + + E+ E A + F +L AT F E ++ E G
Sbjct: 35 NKTHPENPKTVNE-QNKNNDEDKEVTNNIAAQTFSFRELATATKNFRQECLIGEGGFGR- 92
Query: 76 NVVYRGRL-KNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134
VY+G+L K +VA+K+ R +F+ E L + HK LVNLIG CA+GD+RL
Sbjct: 93 --VYKGKLEKTGMIVAVKQLDRNGLQGNKEFIVEVLMLSLLHHKHLVNLIGYCADGDQRL 150
Query: 135 LVAQYMPNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNSQNRK--LYHDLNAY 190
LV +YM +L HL D+ PL W+ R+R+A A L++ + + +Y DL A
Sbjct: 151 LVYEYMSRGSLEDHLLDLTPDQIPLDWDTRIRIALGAAMGLEYLHDKANPPVIYRDLKAA 210
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYG 244
+L D + + +LS FGL K G + Y PE+ RTG++ +S +YS+G
Sbjct: 211 NILLDGEFNAKLSDFGLAKLGPVGDKQHVSSRVMGTYGYCAPEYQRTGQLTTKSDVYSFG 270
Query: 245 TVLLDLLSGKHIPPSHALDVIRGK---NLLL--------------LMDSSLEGQYANEDA 287
VLL+L++G+ + +D R K NL+ L D SLEG + +
Sbjct: 271 VVLLELITGRRV-----IDTTRPKDEQNLVTWAQPVFKEPSRFPELADPSLEGVFPEKAL 325
Query: 288 TQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318
Q V +A+ CLQ EA RP + +++A+ L
Sbjct: 326 NQAVAVAAMCLQEEATVRPLMSDVVTALGFL 356
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P43293|NAK_ARATH Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2 | Back alignment and function description |
|---|
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 162/320 (50%), Gaps = 34/320 (10%)
Query: 37 EGEEEQVPAFKEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRL-------- 88
EGE Q K F L++L++AT F + +V E G V++G + + L
Sbjct: 44 EGEILQNANLKNFSLSELKSATRNFRPDSVVGEGGF---GCVFKGWIDESSLAPSKPGTG 100
Query: 89 --VAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLS 146
+A+KR +++ + +++ E LG + H LV LIG C E + RLLV ++M +L
Sbjct: 101 IVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLE 160
Query: 147 KHLFHWDK--QPLPWEMRVRVAYYIAQALDHC-NSQNRKLYHDLNAYRVLFDEDGDPRLS 203
HLF QPL W RVR+A A+ L N+Q + +Y D A +L D + + +LS
Sbjct: 161 NHLFRRGTFYQPLSWNTRVRMALGAARGLAFLHNAQPQVIYRDFKASNILLDSNYNAKLS 220
Query: 204 SFGLMKNS--RDGKSYSTNL----AYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKH-- 255
FGL ++ D ST + Y PE+L TG + +S +YS+G VLL+LLSG+
Sbjct: 221 DFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAI 280
Query: 256 -----IPPSHALDVIR-----GKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDR 305
+ + +D R + LL +MD L+GQY+ A ++ LA C+ +AK R
Sbjct: 281 DKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSR 340
Query: 306 PDVKFLLSAVAPLQKQTEVA 325
P + ++ + L Q E +
Sbjct: 341 PTMNEIVKTMEELHIQKEAS 360
|
May play a role in the regulation of plant growth and development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 497 | ||||||
| 255571143 | 511 | receptor protein kinase, putative [Ricin | 0.997 | 0.970 | 0.845 | 0.0 | |
| 225427230 | 495 | PREDICTED: probable serine/threonine-pro | 0.985 | 0.989 | 0.849 | 0.0 | |
| 224132078 | 459 | predicted protein [Populus trichocarpa] | 0.913 | 0.989 | 0.897 | 0.0 | |
| 356511538 | 496 | PREDICTED: probable serine/threonine-pro | 0.993 | 0.995 | 0.828 | 0.0 | |
| 115483570 | 512 | Os10g0571300 [Oryza sativa Japonica Grou | 0.995 | 0.966 | 0.792 | 0.0 | |
| 222613313 | 903 | hypothetical protein OsJ_32540 [Oryza sa | 0.965 | 0.531 | 0.822 | 0.0 | |
| 449432319 | 491 | PREDICTED: probable serine/threonine-pro | 0.985 | 0.997 | 0.850 | 0.0 | |
| 356563447 | 498 | PREDICTED: probable serine/threonine-pro | 0.993 | 0.991 | 0.819 | 0.0 | |
| 218185055 | 493 | hypothetical protein OsI_34730 [Oryza sa | 0.989 | 0.997 | 0.810 | 0.0 | |
| 242040127 | 505 | hypothetical protein SORBIDRAFT_01g02846 | 0.995 | 0.980 | 0.803 | 0.0 |
| >gi|255571143|ref|XP_002526522.1| receptor protein kinase, putative [Ricinus communis] gi|223534197|gb|EEF35913.1| receptor protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/511 (84%), Positives = 466/511 (91%), Gaps = 15/511 (2%)
Query: 2 MGCFQSKTAHLASPD-KEAPEAKPDLGEGEG--------------EGEGEEGEEEQVPAF 46
MGCFQSKT HLASPD K P A+ EGE + + EEE+VP F
Sbjct: 1 MGCFQSKTTHLASPDEKPLPPAEDKEEEGEEEVKEEEEEEEEEDGSADLKGNEEEEVPPF 60
Query: 47 KEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFV 106
+EF LA+LRAATNGF++ IVSESG+KAPNVVY+G+L NNRLVAIKRFSR SWPDPHQF+
Sbjct: 61 REFSLAELRAATNGFATHFIVSESGEKAPNVVYKGKLNNNRLVAIKRFSRLSWPDPHQFL 120
Query: 107 TEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVA 166
TEA+G+G +RHKRLVNLIGCCAEGDERLLVA YMPNDTLSKHLFHWDKQPLPWEMR+RVA
Sbjct: 121 TEASGVGKLRHKRLVNLIGCCAEGDERLLVADYMPNDTLSKHLFHWDKQPLPWEMRLRVA 180
Query: 167 YYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPP 226
++IAQ L HCNS NR +YHDLNAYRVLFD+DGDPRLSSFGLMKNSRDGKSYSTNLAYTPP
Sbjct: 181 FFIAQVLYHCNSLNRNIYHDLNAYRVLFDQDGDPRLSSFGLMKNSRDGKSYSTNLAYTPP 240
Query: 227 EFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANED 286
EFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALD+IRGKNLLLLMDSSLEGQYANED
Sbjct: 241 EFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNLLLLMDSSLEGQYANED 300
Query: 287 ATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSKAPVVLPTMLSSL 346
AT+LVELASKCLQYEAKDRPD++FLLSAVAPLQK EVASHVLMG+SK PV+LPTMLS L
Sbjct: 301 ATELVELASKCLQYEAKDRPDIRFLLSAVAPLQKLKEVASHVLMGISKTPVLLPTMLSPL 360
Query: 347 GKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAFRDKDFK 406
GKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAFRDKDFK
Sbjct: 361 GKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAFRDKDFK 420
Query: 407 NAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQAL 466
NA++YY+KLVSMMSVPSGTVFVRRALSYLMI+QAELALRDAMQAQVCLPEWPTAFY+QAL
Sbjct: 421 NAVDYYTKLVSMMSVPSGTVFVRRALSYLMIDQAELALRDAMQAQVCLPEWPTAFYVQAL 480
Query: 467 ALNKLGMETDAQDMLNDGASFEAKKQNSWRI 497
AL+KLGMETDAQDMLNDGASFEAK+Q+SWRI
Sbjct: 481 ALSKLGMETDAQDMLNDGASFEAKRQSSWRI 511
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225427230|ref|XP_002280602.1| PREDICTED: probable serine/threonine-protein kinase At4g35230 [Vitis vinifera] gi|147859294|emb|CAN83954.1| hypothetical protein VITISV_008171 [Vitis vinifera] gi|297742111|emb|CBI33898.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/499 (84%), Positives = 458/499 (91%), Gaps = 9/499 (1%)
Query: 2 MGCFQSKTAHLASPDKEA----PEAKPDLGEGEGEGEGEEGEEEQVPAFKEFVLADLRAA 57
MGCFQSKTAHL SPD + P AKPD G+ + +E QVPAFKE+ L++LR A
Sbjct: 1 MGCFQSKTAHLHSPDDPSSTPEPTAKPDSANGD-----QSDQEHQVPAFKEYGLSELRKA 55
Query: 58 TNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRH 117
TNGFSS+ IVSESG+KAPNVVYRG+L +NRLVA+KRFS+ SWPD QFV EAAG+G VRH
Sbjct: 56 TNGFSSDHIVSESGEKAPNVVYRGKLDSNRLVAVKRFSKLSWPDAQQFVAEAAGVGKVRH 115
Query: 118 KRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCN 177
KRLVNLIGCCAEGDERLLVA+YMPNDTLSKHLFHWDKQPLPW+MRVRVAYYIAQALDHCN
Sbjct: 116 KRLVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWDMRVRVAYYIAQALDHCN 175
Query: 178 SQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPE 237
++NRK+YHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPE
Sbjct: 176 TENRKIYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPE 235
Query: 238 SVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKC 297
SVIYSYGTVLLDLLSGKHIPPSHALD+IRGKN+LLLMDSSLEGQYAN+DAT+LVELASKC
Sbjct: 236 SVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNVLLLMDSSLEGQYANDDATKLVELASKC 295
Query: 298 LQYEAKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSKAPVVLPTMLSSLGKACARMDLTA 357
LQ EA+DRPD FLL+AVAPLQKQ EVASHVLMGL+K VVLPTMLS LGKACARMDLTA
Sbjct: 296 LQSEARDRPDTNFLLTAVAPLQKQKEVASHVLMGLTKTTVVLPTMLSPLGKACARMDLTA 355
Query: 358 VHDILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVS 417
VHDILLKTGYKDEEGAENELSFQEWTQQVQ+MLNTKKFGDIAFRDKDFK+AI+YYSKLV
Sbjct: 356 VHDILLKTGYKDEEGAENELSFQEWTQQVQEMLNTKKFGDIAFRDKDFKSAIDYYSKLVV 415
Query: 418 MMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDA 477
MM VPS TVF RRALSYLMI QAELALRDAMQAQVC+PEWPTAFY+QALAL+KLGMETDA
Sbjct: 416 MMPVPSATVFARRALSYLMIGQAELALRDAMQAQVCIPEWPTAFYLQALALSKLGMETDA 475
Query: 478 QDMLNDGASFEAKKQNSWR 496
QDMLNDGA+FEAK+ NSWR
Sbjct: 476 QDMLNDGAAFEAKRHNSWR 494
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224132078|ref|XP_002321250.1| predicted protein [Populus trichocarpa] gi|222862023|gb|EEE99565.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/459 (89%), Positives = 437/459 (95%), Gaps = 5/459 (1%)
Query: 43 VPAFKEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNN-----RLVAIKRFSRQ 97
VP F+EF LA+LR ATNGFSS+LIVSESG+KAPNVVYRG+LK+N RLVA+KRFSR
Sbjct: 1 VPPFREFSLAELRGATNGFSSDLIVSESGEKAPNVVYRGKLKSNNNNSHRLVAVKRFSRL 60
Query: 98 SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPL 157
SWPDP+QF+TEA+G+G VRH RLVNLIGCCAEGDERLLVA+YMPNDTLSKHLFHW+KQPL
Sbjct: 61 SWPDPNQFLTEASGVGKVRHNRLVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWEKQPL 120
Query: 158 PWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSY 217
PWEMRVRVAYYIAQ LDHCN+QNRK+YHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSY
Sbjct: 121 PWEMRVRVAYYIAQVLDHCNAQNRKIYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSY 180
Query: 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSS 277
STNLAYTPPEFLRTGRVIPESV+YSYGTVLLDLLSGKHIPPSHALD+IRGKNLLLLMDSS
Sbjct: 181 STNLAYTPPEFLRTGRVIPESVVYSYGTVLLDLLSGKHIPPSHALDLIRGKNLLLLMDSS 240
Query: 278 LEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSKAPV 337
LEGQYANED T LVELASKCLQYE+KDRPD+KFLL+AVAPLQKQ EVASHVLMGLSK P
Sbjct: 241 LEGQYANEDGTALVELASKCLQYESKDRPDIKFLLTAVAPLQKQKEVASHVLMGLSKTPA 300
Query: 338 VLPTMLSSLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGD 397
LPTMLS LGKACARMDLTAVH+ILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGD
Sbjct: 301 ALPTMLSPLGKACARMDLTAVHEILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGD 360
Query: 398 IAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEW 457
IAFRDKDFKNAIEYY+KLVSMMSVPSGT+FVRRALSYLMI Q E ALRDAMQAQVCLPEW
Sbjct: 361 IAFRDKDFKNAIEYYTKLVSMMSVPSGTIFVRRALSYLMIGQEEHALRDAMQAQVCLPEW 420
Query: 458 PTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSWR 496
PTAFYMQALAL+KLGME+DAQDMLNDGASFEAKKQNSWR
Sbjct: 421 PTAFYMQALALSKLGMESDAQDMLNDGASFEAKKQNSWR 459
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356511538|ref|XP_003524482.1| PREDICTED: probable serine/threonine-protein kinase At4g35230-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/496 (82%), Positives = 455/496 (91%), Gaps = 2/496 (0%)
Query: 2 MGCFQSKTAHLASPDKEAPEAKPDLGEGE-GEGEGEEGEEEQVPAFKEFVLADLRAATNG 60
MGC SKTAHL SP+ + P A PD + + G G + +E QVPAFKE+ L +LR ATN
Sbjct: 1 MGCLHSKTAHLHSPE-DPPTALPDSKKPDPGNGGDDVDQECQVPAFKEYGLIELRRATNE 59
Query: 61 FSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRL 120
FS++ IVSESG+KAPNVVYRG+L+NNRLVA+KRFS+ SWPD QF+ EAAG+G VRHKRL
Sbjct: 60 FSTDYIVSESGEKAPNVVYRGKLENNRLVAVKRFSKLSWPDAQQFMAEAAGVGKVRHKRL 119
Query: 121 VNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQN 180
VNLIGCCAEGDERLLVA+YMPNDTLSKHLFHWDKQPLPWEMRVRVAY++AQALDHC+ +N
Sbjct: 120 VNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDHCSLEN 179
Query: 181 RKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVI 240
RK+YHDLNAYR+LFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGR+IPESVI
Sbjct: 180 RKIYHDLNAYRILFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVI 239
Query: 241 YSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQY 300
YSYGTVLLDLLSGKHIPPSHALD+IRGKN+LLLMDSSLEGQYAN+DAT+LVELASKCLQ+
Sbjct: 240 YSYGTVLLDLLSGKHIPPSHALDLIRGKNVLLLMDSSLEGQYANDDATKLVELASKCLQF 299
Query: 301 EAKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSKAPVVLPTMLSSLGKACARMDLTAVHD 360
EA++RP++KFLL+AVAPLQKQ EV SHVLMGL+K VLPTMLS LGKACARMDLTAVHD
Sbjct: 300 EARERPEIKFLLTAVAPLQKQKEVTSHVLMGLTKNTAVLPTMLSPLGKACARMDLTAVHD 359
Query: 361 ILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMS 420
ILLKTGYKDEEGAENELSFQEWTQQVQD+LNTKKFGDIAFRDKDFKNAIEYYSKLV MMS
Sbjct: 360 ILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKFGDIAFRDKDFKNAIEYYSKLVVMMS 419
Query: 421 VPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDM 480
VPS TVF RRA SYLM +QAELALRDAMQAQVC+P+WPTAFY+QALAL+KLGMETDA DM
Sbjct: 420 VPSATVFARRAFSYLMNDQAELALRDAMQAQVCIPDWPTAFYLQALALSKLGMETDAHDM 479
Query: 481 LNDGASFEAKKQNSWR 496
LNDGA+FEAK+ NSWR
Sbjct: 480 LNDGAAFEAKRSNSWR 495
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|115483570|ref|NP_001065455.1| Os10g0571300 [Oryza sativa Japonica Group] gi|19225015|gb|AAL86491.1|AC077693_30 putative protein kinase [Oryza sativa Japonica Group] gi|31433613|gb|AAP55105.1| protein kinase family protein, putative, expressed [Oryza sativa Japonica Group] gi|113639987|dbj|BAF27292.1| Os10g0571300 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/511 (79%), Positives = 450/511 (88%), Gaps = 16/511 (3%)
Query: 2 MGCFQSKTA----------------HLASPDKEAPEAKPDLGEGEGEGEGEEGEEEQVPA 45
MGCF SK A + A P+ A D +G G+ ++ + VP
Sbjct: 1 MGCFLSKPAGAGPLPPNDAAALPADNPADPEAAAANGGADSAAADGGGDDKDAAKRAVPV 60
Query: 46 FKEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQF 105
F+EF LA+LRAAT GFS++LIVSESG+KAPNVVYRGRL RL+A+KRFSR SWPDP QF
Sbjct: 61 FREFGLAELRAATKGFSADLIVSESGEKAPNVVYRGRLDGGRLIAVKRFSRLSWPDPQQF 120
Query: 106 VTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV 165
+ EAAG+G VRHKRLVNLIGCCAEGDERLLVA+YMPNDTLSKHLFHWDKQPLPWEMR+RV
Sbjct: 121 LAEAAGVGKVRHKRLVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRLRV 180
Query: 166 AYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP 225
AYYIAQALDHCN++NRK+YHDLNAYRVLFDE+GDPRLSSFGLMKNSRDGKSYSTNLAYTP
Sbjct: 181 AYYIAQALDHCNAENRKIYHDLNAYRVLFDEEGDPRLSSFGLMKNSRDGKSYSTNLAYTP 240
Query: 226 PEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANE 285
PEFLRTGRVI ESVIYSYGTVLLDLLSGKHIPPSHALD+IRGKN+LLLMDSSLEGQYANE
Sbjct: 241 PEFLRTGRVIAESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNILLLMDSSLEGQYANE 300
Query: 286 DATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSKAPVVLPTMLSS 345
DA++LV+LASKCLQ+EA+DRP++K+LLS+V PLQKQ EVASHVLMG++KA VLPT+LS
Sbjct: 301 DASKLVDLASKCLQFEARDRPNIKYLLSSVGPLQKQKEVASHVLMGITKATAVLPTILSP 360
Query: 346 LGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAFRDKDF 405
LGKAC+ MDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQ+MLNTKKFGDIAFRDKDF
Sbjct: 361 LGKACSGMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQEMLNTKKFGDIAFRDKDF 420
Query: 406 KNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQA 465
K AI+YYSKLV MMSVPS TVF RR+ SYLM Q+ELALRDAMQAQVC+PEWPTAFY+QA
Sbjct: 421 KTAIDYYSKLVGMMSVPSATVFARRSFSYLMNGQSELALRDAMQAQVCMPEWPTAFYLQA 480
Query: 466 LALNKLGMETDAQDMLNDGASFEAKKQNSWR 496
LAL+KLGMETDAQDMLNDGA+FEAKKQNSWR
Sbjct: 481 LALSKLGMETDAQDMLNDGATFEAKKQNSWR 511
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|222613313|gb|EEE51445.1| hypothetical protein OsJ_32540 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/480 (82%), Positives = 439/480 (91%)
Query: 17 KEAPEAKPDLGEGEGEGEGEEGEEEQVPAFKEFVLADLRAATNGFSSELIVSESGDKAPN 76
+ A D +G G+ ++ + VP F+EF LA+LRAAT GFS++LIVSESG+KAPN
Sbjct: 423 RRAANGGADFAAADGGGDDKDAAKRAVPVFREFGLAELRAATKGFSADLIVSESGEKAPN 482
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136
VVYRGRL L+A+KRFSR SWPDP QF+ EAAG+G VRHKRLVNLIGCCAEGDERLLV
Sbjct: 483 VVYRGRLDGGSLIAVKRFSRLSWPDPQQFLAEAAGVGKVRHKRLVNLIGCCAEGDERLLV 542
Query: 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE 196
A+YMPNDTLSKHLFHWDKQPLPWEMR+RVAYYIAQALDHCN++NRK+YHDLNAYRVLFDE
Sbjct: 543 AEYMPNDTLSKHLFHWDKQPLPWEMRLRVAYYIAQALDHCNAENRKIYHDLNAYRVLFDE 602
Query: 197 DGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHI 256
+GDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVI ESVIYSYGTVLLDLLSGKHI
Sbjct: 603 EGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIAESVIYSYGTVLLDLLSGKHI 662
Query: 257 PPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVA 316
PPSHALD+IRGKN+LLLMDSSLEGQYANEDA++LV+LASKCLQ+EA+DRP++K+LLS+V
Sbjct: 663 PPSHALDLIRGKNILLLMDSSLEGQYANEDASKLVDLASKCLQFEARDRPNIKYLLSSVG 722
Query: 317 PLQKQTEVASHVLMGLSKAPVVLPTMLSSLGKACARMDLTAVHDILLKTGYKDEEGAENE 376
PLQKQ EVASHVLMG++KA VLPT+LS LGKAC+ MDLTAVHDILLKTGYKDEEGAENE
Sbjct: 723 PLQKQKEVASHVLMGITKATAVLPTILSPLGKACSGMDLTAVHDILLKTGYKDEEGAENE 782
Query: 377 LSFQEWTQQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLM 436
LSFQEWTQQVQ+MLNTKKFGDIAFRDKDFK AI+YYSKLV MMSVPS TVF RR+ SYLM
Sbjct: 783 LSFQEWTQQVQEMLNTKKFGDIAFRDKDFKTAIDYYSKLVGMMSVPSATVFARRSFSYLM 842
Query: 437 IEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSWR 496
Q+ELALRDAMQAQVC+PEWPTAFY+QALAL+KLGMETDAQDMLNDGA+FEAKKQNSWR
Sbjct: 843 NGQSELALRDAMQAQVCMPEWPTAFYLQALALSKLGMETDAQDMLNDGATFEAKKQNSWR 902
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449432319|ref|XP_004133947.1| PREDICTED: probable serine/threonine-protein kinase At4g35230-like [Cucumis sativus] gi|449523854|ref|XP_004168938.1| PREDICTED: probable serine/threonine-protein kinase At4g35230-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/495 (85%), Positives = 456/495 (92%), Gaps = 5/495 (1%)
Query: 2 MGCFQSKTAHLASPDKEAPEAKPDLGEGEGEGEGEEGEEEQVPAFKEFVLADLRAATNGF 61
MGCFQSKT HL SPD + P + GEE EE QVPAFKEF L +LRAATNGF
Sbjct: 1 MGCFQSKTIHLPSPDDDPPPPQ----PKPDPANGEELEEGQVPAFKEFELVELRAATNGF 56
Query: 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLV 121
SSELIVSESG KAPNVVYRG+L+NNRLVAIKRFS++SWPDP QFVTEA+G+G +R KRLV
Sbjct: 57 SSELIVSESGKKAPNVVYRGKLRNNRLVAIKRFSKESWPDPQQFVTEASGVGKLRFKRLV 116
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNR 181
NLIGCCAEGDERLLVA+YM NDTLSKHLFHW+KQP PWEMRVRVA YIAQALDHC+++NR
Sbjct: 117 NLIGCCAEGDERLLVAEYMSNDTLSKHLFHWEKQPFPWEMRVRVANYIAQALDHCSTENR 176
Query: 182 KLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIY 241
K+YHDLNAYRVLFDEDGDPRLSSFGL+KNS DGKSYSTNLAYTPPEFLRTGRVIPESVIY
Sbjct: 177 KIYHDLNAYRVLFDEDGDPRLSSFGLIKNSHDGKSYSTNLAYTPPEFLRTGRVIPESVIY 236
Query: 242 SYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYE 301
SYGT+LLDLLSGKHIPPSHALD++RGKNLLLLMDSSLEGQY ++DATQL++LASKCLQYE
Sbjct: 237 SYGTILLDLLSGKHIPPSHALDLLRGKNLLLLMDSSLEGQYGDDDATQLIDLASKCLQYE 296
Query: 302 AKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSKAPVVLPTMLSSLGKACARMDLTAVHDI 361
A+DRPD+KF+LSAVA LQKQ EVASHVLMGL+K PVVLPTMLS+LGKAC RMDLTAVHDI
Sbjct: 297 ARDRPDIKFVLSAVASLQKQ-EVASHVLMGLTKTPVVLPTMLSALGKACVRMDLTAVHDI 355
Query: 362 LLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSV 421
LLK GYKDEEGAE+ELSFQEWTQQVQDMLNTKKFGDIAFRDKD+KNAIEYYSKLVSMMSV
Sbjct: 356 LLKVGYKDEEGAESELSFQEWTQQVQDMLNTKKFGDIAFRDKDYKNAIEYYSKLVSMMSV 415
Query: 422 PSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDML 481
PSGTVFVRRALSYLM+ Q ELALRDAMQ+QVCLPEWPTAFYMQALAL+KLGME+DAQDML
Sbjct: 416 PSGTVFVRRALSYLMVGQPELALRDAMQSQVCLPEWPTAFYMQALALSKLGMESDAQDML 475
Query: 482 NDGASFEAKKQNSWR 496
NDG SFEAKKQN WR
Sbjct: 476 NDGTSFEAKKQNIWR 490
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356563447|ref|XP_003549974.1| PREDICTED: probable serine/threonine-protein kinase At4g35230-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/498 (81%), Positives = 454/498 (91%), Gaps = 4/498 (0%)
Query: 2 MGCFQSKTAHLASPDKEAPEAKPDLGEGE-GEGEGEEGEEEQVPAFKEFVLADLRAATNG 60
MGC SKTAHL SP+ + P A PD + + G G + +E QV AFKE+ L +LR ATN
Sbjct: 1 MGCLHSKTAHLHSPE-DPPTALPDSKKPDPGNGGDDVDQECQVQAFKEYGLIELRRATNE 59
Query: 61 FSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRL 120
FS++ IVSESG+KAPNVVYRG+L+NNRLVA+KRFS+ SWPD QF+ EAAG+G VRHKR+
Sbjct: 60 FSTDYIVSESGEKAPNVVYRGKLENNRLVAVKRFSKLSWPDAQQFMAEAAGVGKVRHKRM 119
Query: 121 VNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQN 180
VNLIGCCAEGDERLLVA+YMPNDTLSKHLFHWDKQPLPWEMRVRVAY++AQALDHC+ +N
Sbjct: 120 VNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDHCSLEN 179
Query: 181 RKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVI 240
K+YHDLNAYR+LFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGR+IPESVI
Sbjct: 180 HKIYHDLNAYRILFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVI 239
Query: 241 YSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQY 300
YSYGTVLLDLLSGKHIPPSHALD+IRGKN+LLLMDSSLEGQYAN+DAT+LVELASKCLQ+
Sbjct: 240 YSYGTVLLDLLSGKHIPPSHALDLIRGKNVLLLMDSSLEGQYANDDATKLVELASKCLQF 299
Query: 301 EAKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSK--APVVLPTMLSSLGKACARMDLTAV 358
EA++RP++KFLL+AVAPLQ+Q EVAS VLMGL+K A VLPTMLS LGKACARMDLTAV
Sbjct: 300 EARERPEIKFLLTAVAPLQRQKEVASLVLMGLTKNTAVAVLPTMLSPLGKACARMDLTAV 359
Query: 359 HDILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSM 418
HDILLKTGYKDEEGAENELSFQEWTQQVQD+LNTKKFGDIAFRDKDFKNAIEYYSKLV M
Sbjct: 360 HDILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKFGDIAFRDKDFKNAIEYYSKLVVM 419
Query: 419 MSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQ 478
MSVPS TVF RRA SYLM +QAELALRDAMQAQVC+P+WPTAFY+QALAL+KLGMETDA
Sbjct: 420 MSVPSATVFARRAFSYLMNDQAELALRDAMQAQVCIPDWPTAFYLQALALSKLGMETDAH 479
Query: 479 DMLNDGASFEAKKQNSWR 496
DMLNDGA+FEAK+ NSWR
Sbjct: 480 DMLNDGAAFEAKRSNSWR 497
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|218185055|gb|EEC67482.1| hypothetical protein OsI_34730 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/495 (81%), Positives = 445/495 (89%), Gaps = 3/495 (0%)
Query: 2 MGCFQSKTAHLASPDKEAPEAKPDLGEGEGEGEGEEGEEEQVPAFKEFVLADLRAATNGF 61
MGCF SK A + +G G+ ++ + VP F+EF LA+LRAAT GF
Sbjct: 1 MGCFLSKPAGAEAAAANGGADSA---AADGGGDDKDAAKRAVPVFREFGLAELRAATKGF 57
Query: 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLV 121
S++LIVSESG+KAPNVVYRGRL RL+A+KRFSR SWPDP QF+ EAAG+G VRHKRLV
Sbjct: 58 SADLIVSESGEKAPNVVYRGRLDGGRLIAVKRFSRLSWPDPQQFLAEAAGVGKVRHKRLV 117
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNR 181
NLIGCCAEGDERLLVA+YMPNDTLSKHLFHWDKQPLPWEMR+RVAYYIAQALDHCN++NR
Sbjct: 118 NLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRLRVAYYIAQALDHCNAENR 177
Query: 182 KLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIY 241
K+YHDLNAYRVLFDE+GDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVI ESVIY
Sbjct: 178 KIYHDLNAYRVLFDEEGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIAESVIY 237
Query: 242 SYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYE 301
SYGTVLLDLLSGKHIPPSHALD+IRGKN+LLLMDSSLEGQYANEDA++LV+LASKCLQ+E
Sbjct: 238 SYGTVLLDLLSGKHIPPSHALDLIRGKNILLLMDSSLEGQYANEDASKLVDLASKCLQFE 297
Query: 302 AKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSKAPVVLPTMLSSLGKACARMDLTAVHDI 361
A+DRP++K+LLS+V PLQKQ EVASHVLMG++KA VLPT+LS LGKAC+ MDLTAVHDI
Sbjct: 298 ARDRPNIKYLLSSVGPLQKQKEVASHVLMGITKATAVLPTILSPLGKACSGMDLTAVHDI 357
Query: 362 LLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSV 421
LLKTGYKDEEGAENELSFQEWTQQVQ+MLNTKKFGDIAFRDKDFK AI+YYSKLV MMSV
Sbjct: 358 LLKTGYKDEEGAENELSFQEWTQQVQEMLNTKKFGDIAFRDKDFKTAIDYYSKLVGMMSV 417
Query: 422 PSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDML 481
PS TVF RR+ SYLM Q+ELALRDAMQAQVC+PEWPTAFY+QALAL+KLGMETDAQDML
Sbjct: 418 PSATVFARRSFSYLMNGQSELALRDAMQAQVCMPEWPTAFYLQALALSKLGMETDAQDML 477
Query: 482 NDGASFEAKKQNSWR 496
NDGA+FEAKKQNSWR
Sbjct: 478 NDGATFEAKKQNSWR 492
|
Source: Oryza sativa Indica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|242040127|ref|XP_002467458.1| hypothetical protein SORBIDRAFT_01g028460 [Sorghum bicolor] gi|241921312|gb|EER94456.1| hypothetical protein SORBIDRAFT_01g028460 [Sorghum bicolor] | Back alignment and taxonomy information |
|---|
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/504 (80%), Positives = 451/504 (89%), Gaps = 9/504 (1%)
Query: 2 MGCFQSKTAHLASP--------DKEA-PEAKPDLGEGEGEGEGEEGEEEQVPAFKEFVLA 52
MGCFQSK A P DK A PEA +G G+G+ +E + VP F+EF LA
Sbjct: 1 MGCFQSKVAGPLPPKDAAALPADKPADPEAANGGPDGGGDGDDKEAVKRAVPVFREFALA 60
Query: 53 DLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGL 112
+LRAAT GFS++LIVSESG+KAPN VYRGRL RL+A+KRFSR SWPDP QF+ EAAG+
Sbjct: 61 ELRAATKGFSADLIVSESGEKAPNAVYRGRLDGGRLIAVKRFSRLSWPDPQQFLAEAAGV 120
Query: 113 GNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQA 172
G VRHKRLVNLIGCCAEGDERLLVA+YMPNDTLSKHLFHWDKQPLPWEMR+RVAY+IAQA
Sbjct: 121 GKVRHKRLVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRLRVAYFIAQA 180
Query: 173 LDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTG 232
LDHCN++NRK+YHDLNAYRVLFDE+GDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTG
Sbjct: 181 LDHCNAENRKIYHDLNAYRVLFDEEGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTG 240
Query: 233 RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292
RVIPESVIYSYGTVLLDLLSGKHIPPSHALD+IRGKN+LLLMDSSLEGQYANEDA++LV+
Sbjct: 241 RVIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNILLLMDSSLEGQYANEDASKLVD 300
Query: 293 LASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSKAPVVLPTMLSSLGKACAR 352
LASKCLQ+E++DRP++K+LLS+V PLQKQ EVASHV MG++KA VLPT+ S LGKACA
Sbjct: 301 LASKCLQFESRDRPNIKYLLSSVGPLQKQKEVASHVFMGITKATSVLPTIYSPLGKACAG 360
Query: 353 MDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAFRDKDFKNAIEYY 412
MDL+AVHDILLKTGYKD+EGAENELSFQEWTQQVQ+MLNTKKFGDIAFRDKDFK AI+YY
Sbjct: 361 MDLSAVHDILLKTGYKDDEGAENELSFQEWTQQVQEMLNTKKFGDIAFRDKDFKTAIDYY 420
Query: 413 SKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLG 472
SKLV+MMS PS TVF RR+ SYLM QAELALRDAMQAQVC+PEWPTAFY+QALAL+KLG
Sbjct: 421 SKLVAMMSTPSATVFARRSFSYLMNGQAELALRDAMQAQVCMPEWPTAFYLQALALSKLG 480
Query: 473 METDAQDMLNDGASFEAKKQNSWR 496
METDAQDMLNDGA+FEAKKQN WR
Sbjct: 481 METDAQDMLNDGATFEAKKQNGWR 504
|
Source: Sorghum bicolor Species: Sorghum bicolor Genus: Sorghum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 497 | ||||||
| TAIR|locus:2142315 | 489 | BSK2 "brassinosteroid-signalin | 0.981 | 0.997 | 0.787 | 1.3e-212 | |
| TAIR|locus:2122058 | 512 | BSK1 "brassinosteroid-signalin | 0.911 | 0.884 | 0.645 | 7.1e-164 | |
| TAIR|locus:2154538 | 489 | BSK5 "brassinosteroid-signalin | 0.909 | 0.924 | 0.645 | 3.6e-160 | |
| TAIR|locus:2084475 | 490 | BSK6 "brassinosteroid-signalin | 0.905 | 0.918 | 0.624 | 1e-155 | |
| TAIR|locus:2031279 | 487 | BSK7 "brassinosteroid-signalin | 0.899 | 0.917 | 0.608 | 9.8e-151 | |
| TAIR|locus:2155115 | 487 | BSK8 "brassinosteroid-signalin | 0.973 | 0.993 | 0.571 | 1.2e-150 | |
| TAIR|locus:2127118 | 489 | BSK3 "brassinosteroid-signalin | 0.909 | 0.924 | 0.606 | 2e-150 | |
| TAIR|locus:2198160 | 483 | BSK4 "brassinosteroid-signalin | 0.889 | 0.915 | 0.574 | 5.2e-136 | |
| TAIR|locus:2083499 | 477 | BSK9 "brassinosteroid-signalin | 0.897 | 0.935 | 0.543 | 6.4e-131 | |
| TAIR|locus:2036426 | 507 | BSK11 "brassinosteroid-signali | 0.901 | 0.883 | 0.529 | 7.3e-130 |
| TAIR|locus:2142315 BSK2 "brassinosteroid-signaling kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2055 (728.5 bits), Expect = 1.3e-212, P = 1.3e-212
Identities = 390/495 (78%), Positives = 434/495 (87%)
Query: 2 MGCFQSKTAHLASPDKEAPEAKPDLXXXXXXXXXXXXXXXQVPAFKEFVLADLRAATNGF 61
MGC SKTA+L S D + KP+ ++ FKEF L +LR ATNGF
Sbjct: 1 MGCLHSKTANLPSSDDPSAPNKPE-------SVNGDQVDQEIQNFKEFELNELRKATNGF 53
Query: 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLV 121
S IVSE G+KAPNVVYRG+L+ N LVAIKRFSRQSWPD QFV EA G+G +R+KR+V
Sbjct: 54 SPSCIVSEGGEKAPNVVYRGKLEGNHLVAIKRFSRQSWPDAQQFVVEATGVGKLRNKRIV 113
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNR 181
+LIGCCAEGDERLLVA+YMPNDTLSKHLFHW+KQPLPW+MRVR+A YIA+ALD+CN +NR
Sbjct: 114 SLIGCCAEGDERLLVAEYMPNDTLSKHLFHWEKQPLPWDMRVRIADYIAEALDYCNIENR 173
Query: 182 KLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIY 241
K+YHDLNAYR+LFDE+GDPRLS+FGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVI+
Sbjct: 174 KIYHDLNAYRILFDEEGDPRLSTFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIF 233
Query: 242 SYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYE 301
SYGT+LLDLLSGKHIPPSHALD+IRGKN LLLMDSSLEGQYAN+DAT+LV+LASKCLQ E
Sbjct: 234 SYGTILLDLLSGKHIPPSHALDIIRGKNALLLMDSSLEGQYANDDATKLVDLASKCLQSE 293
Query: 302 AKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSKAPVVLPTMLSSLGKACARMDLTAVHDI 361
AKDRPD KFLLSAVAPLQKQ EVASHVLMGL K V+LPTMLS LGKACA+MDL HDI
Sbjct: 294 AKDRPDTKFLLSAVAPLQKQEEVASHVLMGLPKNTVILPTMLSPLGKACAKMDLATFHDI 353
Query: 362 LLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSV 421
LLKTGY+DEEGAENELSFQEWTQQVQ+MLNTKKFGDIAFRDKDFKN+IEYYSKLV MM V
Sbjct: 354 LLKTGYRDEEGAENELSFQEWTQQVQEMLNTKKFGDIAFRDKDFKNSIEYYSKLVGMMPV 413
Query: 422 PSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDML 481
PS TVF RRA SYLM +Q ELALRDAMQAQVC+PEWPTAFY+QALAL+KLGMETDAQDML
Sbjct: 414 PSATVFARRAFSYLMTDQQELALRDAMQAQVCIPEWPTAFYLQALALSKLGMETDAQDML 473
Query: 482 NDGASFEAKKQNSWR 496
NDGA+++AK+QNSWR
Sbjct: 474 NDGAAYDAKRQNSWR 488
|
|
| TAIR|locus:2122058 BSK1 "brassinosteroid-signaling kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1595 (566.5 bits), Expect = 7.1e-164, P = 7.1e-164
Identities = 295/457 (64%), Positives = 375/457 (82%)
Query: 43 VPAFKEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDP 102
+P+F EF ADL+AATN FSS+ IVSESG+KAPN+VY+GRL+N R +A+K+F++ +WP+P
Sbjct: 55 IPSFSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMAWPEP 114
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
QF EA G+G +RH RL NLIG C +GDERLLVA++MPNDTL+KHLFHW+ Q + W MR
Sbjct: 115 KQFAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMR 174
Query: 163 VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA 222
+RV YYIA+ALD+C+++ R LYHDLNAYRVLFDEDGDPRLS FGLMKNSRDGKSYSTNLA
Sbjct: 175 LRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLA 234
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282
YTPPE+LR GRV PESV YS+GTVLLDLLSGKHIPPSHALD+IRGKN++LLMDS LEG++
Sbjct: 235 YTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKF 294
Query: 283 ANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSK---APVVL 339
+ E+AT +VELAS+CLQYE ++RP+ K L++ +APLQ +++V S+V++G+ K AP
Sbjct: 295 STEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPSTP 354
Query: 340 PTMLSSLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIA 399
LS LG+AC+RMDLTA+H IL+ T Y+D+EG NELSFQEWTQQ++DML+ +K GD +
Sbjct: 355 QRPLSPLGEACSRMDLTAIHQILVMTHYRDDEGT-NELSFQEWTQQMKDMLDARKRGDQS 413
Query: 400 FRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPT 459
FR+KDFK AI+ YS+ + + ++ S TVF RR+L YL+ +Q + ALRDAMQAQ P+WPT
Sbjct: 414 FREKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPDWPT 473
Query: 460 AFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSWR 496
AFYMQ++AL KL M TDA DMLN+ A E K+Q R
Sbjct: 474 AFYMQSVALAKLNMNTDAADMLNEAAQLEEKRQRGGR 510
|
|
| TAIR|locus:2154538 BSK5 "brassinosteroid-signaling kinase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1560 (554.2 bits), Expect = 3.6e-160, P = 3.6e-160
Identities = 293/454 (64%), Positives = 365/454 (80%)
Query: 43 VPAFKEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDP 102
+P+F EF LRAAT GFS++ IVSE G KAPNVVY+GRL+++R +A+KRF+R +WPD
Sbjct: 34 LPSFTEFSFDQLRAATCGFSTDSIVSEHGVKAPNVVYKGRLEDDRWIAVKRFNRSAWPDT 93
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
QF+ EA +G +R++RL NLIG C EGDERLLVA++MP +TLSKHLFHWD QP+ W MR
Sbjct: 94 RQFLEEAKAVGQLRNERLANLIGFCCEGDERLLVAEFMPFETLSKHLFHWDSQPMKWSMR 153
Query: 163 VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA 222
+RVA Y+AQAL++C+S+ R LYHDLNAYR+LFD+DG+PRLS FGLMKNSRDGKSYSTNLA
Sbjct: 154 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA 213
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282
+TPPE+LRTGRVIPESV+YS+GT+LLDLLSGKHIPPSHALD+IRGKN L+LMDS L+G +
Sbjct: 214 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLDGHF 273
Query: 283 ANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVASHVLMGL--SKAPVVLP 340
+N+D T LV LAS+CLQYEA++RP+VK L+S++APLQK+T++ SHVLMG+ A
Sbjct: 274 SNDDGTDLVRLASRCLQYEARERPNVKSLVSSLAPLQKETDIPSHVLMGIPHGAASPKET 333
Query: 341 TMLSSLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAF 400
T L+ LG AC+R DLTA+H+IL K GYKD+EG NELSFQ WT Q+Q+ LN+KK GD AF
Sbjct: 334 TSLTPLGDACSRHDLTAIHEILEKVGYKDDEGVANELSFQVWTDQIQETLNSKKQGDAAF 393
Query: 401 RDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTA 460
+ KDF A+E Y++ + ++ S TVF RR L YLM + AL DAMQAQV PEWPTA
Sbjct: 394 KGKDFVTAVECYTQFIEDGTMVSPTVFARRCLCYLMSNMPQEALGDAMQAQVVSPEWPTA 453
Query: 461 FYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494
FY+QA AL LGM+ DA + L DG S EAKK N+
Sbjct: 454 FYLQAAALFSLGMDKDACETLKDGTSLEAKKHNN 487
|
|
| TAIR|locus:2084475 BSK6 "brassinosteroid-signaling kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1518 (539.4 bits), Expect = 1.0e-155, P = 1.0e-155
Identities = 283/453 (62%), Positives = 363/453 (80%)
Query: 44 PAFKEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPH 103
P FKEF L L++AT GFSS+ IVSE G+KAPNVVYRGRL + RL+A+KRF+R +W D
Sbjct: 36 PTFKEFKLEQLKSATGGFSSDNIVSEHGEKAPNVVYRGRLDDGRLIAVKRFNRLAWADHR 95
Query: 104 QFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRV 163
QF+ EA +G++R RL NLIGCC EG+ERLLVA++MP++TL+KHLFHW+ P+ W MR+
Sbjct: 96 QFLDEAKAVGSLRSDRLANLIGCCFEGEERLLVAEFMPHETLAKHLFHWENNPMKWAMRL 155
Query: 164 RVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAY 223
RVA +AQAL++C+++ R LYHDLNAYRVLFD+DG+PRLS FGLMKNSRDGKSYSTNLA+
Sbjct: 156 RVALCLAQALEYCSNKGRALYHDLNAYRVLFDKDGNPRLSCFGLMKNSRDGKSYSTNLAF 215
Query: 224 TPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA 283
TPPE+LRTGRV PESV++S+GTVLLDL+SGKHIPPSHALD+IRGKN +LMDS+LEG ++
Sbjct: 216 TPPEYLRTGRVTPESVVFSFGTVLLDLMSGKHIPPSHALDLIRGKNCAMLMDSALEGHFS 275
Query: 284 NEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVASHVLMGL---SKAPVVLP 340
NED T+LV LA++CLQYEA++RP+VK L++++ LQK+++VAS+VLMG+ ++A P
Sbjct: 276 NEDGTELVRLATRCLQYEARERPNVKSLVTSLVTLQKESDVASYVLMGIPHETEAEEESP 335
Query: 341 TMLSSLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAF 400
L+ G AC R+DLTA+ +IL K GYKD+EG NELSFQ WT Q+Q+ LN+KK GD+AF
Sbjct: 336 LSLTPFGDACLRVDLTAIQEILSKIGYKDDEGIANELSFQMWTNQMQESLNSKKQGDLAF 395
Query: 401 RDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTA 460
R KDF A++ Y++ + ++ S TV RR LSYLM + A+ AL DA+QAQV P+WPTA
Sbjct: 396 RSKDFTTAVDCYTQFIDGGTMVSPTVHARRCLSYLMNDNAQEALTDALQAQVVSPDWPTA 455
Query: 461 FYMQALALNKLGMETDAQDMLNDGASFEAKKQN 493
Y+QA L KLGME DAQ L DG + EAKK N
Sbjct: 456 LYLQAACLFKLGMEADAQQALKDGTTLEAKKSN 488
|
|
| TAIR|locus:2031279 BSK7 "brassinosteroid-signaling kinase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1471 (522.9 bits), Expect = 9.8e-151, P = 9.8e-151
Identities = 273/449 (60%), Positives = 353/449 (78%)
Query: 43 VPAFKEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDP 102
+P F+EF + LR AT+GF++E IVSE G+KAPNVVY+G+L N R +A+KRF+R++WPD
Sbjct: 38 LPQFREFSIETLRNATSGFATENIVSEHGEKAPNVVYKGKLDNQRRIAVKRFNRKAWPDS 97
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
QF+ EA +G +R+ R+ NL+GCC EG+ERLLVA++MPN+TL+KHLFHW+ QP+ W MR
Sbjct: 98 RQFLEEAKAVGQLRNYRMANLLGCCYEGEERLLVAEFMPNETLAKHLFHWESQPMKWAMR 157
Query: 163 VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA 222
+RVA +IAQAL++C + R LYHDLNAYRVLFD+D +PRLS FGLMKNSRDGKSYSTNLA
Sbjct: 158 LRVALHIAQALEYCTGKGRALYHDLNAYRVLFDDDSNPRLSCFGLMKNSRDGKSYSTNLA 217
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282
+TPPE+LRTGRV PESV+YSYGT+LLDLLSGKHIPPSHALD+IR +N+ +L+DS LEGQ+
Sbjct: 218 FTPPEYLRTGRVTPESVMYSYGTLLLDLLSGKHIPPSHALDLIRDRNIQMLIDSCLEGQF 277
Query: 283 ANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSKAPVVLPTM 342
+++D T+L+ LAS+CLQYE ++RP+ K L++A+ PLQK E SH LMG+ + P
Sbjct: 278 SSDDGTELIRLASRCLQYEPRERPNPKSLVTAMIPLQKDLETPSHQLMGIPSSASTTP-- 335
Query: 343 LSSLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAFRD 402
LS LG+AC R DLTA+H+IL K YKD+EGA ELSFQ WT Q+QD LN KK GD+AFR
Sbjct: 336 LSPLGEACLRTDLTAIHEILEKLSYKDDEGAATELSFQMWTNQMQDSLNFKKKGDVAFRH 395
Query: 403 KDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFY 462
K+F NAI+ YS+ + ++ S TV+ RR+L YLM E + AL DAMQAQV P W A Y
Sbjct: 396 KEFANAIDCYSQFIEGGTMVSPTVYARRSLCYLMNEMPQEALNDAMQAQVISPAWHIASY 455
Query: 463 MQALALNKLGMETDAQDMLNDGASFEAKK 491
+QA+AL+ LG E +A L DG+ E+K+
Sbjct: 456 LQAVALSALGQENEAHAALKDGSMLESKR 484
|
|
| TAIR|locus:2155115 BSK8 "brassinosteroid-signaling kinase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1470 (522.5 bits), Expect = 1.2e-150, P = 1.2e-150
Identities = 280/490 (57%), Positives = 366/490 (74%)
Query: 2 MGCFQSKTAHLASPDKEAPEAKPDLXXXXXXXXXXXXXXXQVPAFKEFVLADLRAATNGF 61
MGC SK + L E+ + PD+ +P F+EF + +R AT+GF
Sbjct: 1 MGCEVSKLSALCCVS-ESGRSNPDVTGLDEEGRGESN---DLPQFREFSIETIRNATSGF 56
Query: 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLV 121
++E IVSE G++APNVVY+G+L+N R +A+KRF+R+SWPD QF+ EA +G +R+ R+
Sbjct: 57 AAENIVSEHGERAPNVVYKGKLENQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMA 116
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNR 181
NL+GCC E +ERLL+A++MPN+TL+KHLFHW+ QP+ W MR+RVA +IAQAL++C S+ R
Sbjct: 117 NLLGCCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGR 176
Query: 182 KLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIY 241
LYHDLNAYRVLFD+D +PRLS FGLMKNSRDGKSYSTNLA+TPPE+LRTGRV PESVIY
Sbjct: 177 ALYHDLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIY 236
Query: 242 SYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYE 301
S+GT+LLDLLSGKHIPPSHALD+IR +N+ +LMDS LEGQ++++D T+L+ LAS+CLQYE
Sbjct: 237 SFGTLLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYE 296
Query: 302 AKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSKAPVVLPTMLSSLGKACARMDLTAVHDI 361
++RP+ K L+SA+ PLQK E+ASH L+G+ + T LS LG+AC R DLTA+H+I
Sbjct: 297 PRERPNPKSLVSAMIPLQKDLEIASHQLLGVPNSATT--TALSPLGEACLRSDLTAIHEI 354
Query: 362 LLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSV 421
+ K GYKD+EGA ELSFQ WT Q+QD L KK GD AFR KDF AIE YS+ + + ++
Sbjct: 355 IEKLGYKDDEGATTELSFQMWTDQMQDTLVFKKKGDSAFRHKDFAKAIECYSQFIEVGTM 414
Query: 422 PSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDML 481
S TV R++L YLM + AL +AMQAQV P W A Y+QA+AL+ LG E +A L
Sbjct: 415 GSPTVHARQSLCYLMNDMPREALNNAMQAQVISPAWHIASYLQAVALSALGQENEAHTAL 474
Query: 482 NDGASFEAKK 491
DGA E+K+
Sbjct: 475 KDGAMLESKR 484
|
|
| TAIR|locus:2127118 BSK3 "brassinosteroid-signaling kinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1468 (521.8 bits), Expect = 2.0e-150, P = 2.0e-150
Identities = 276/455 (60%), Positives = 358/455 (78%)
Query: 43 VPAFKEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDP 102
VP F+E+ L L+AAT+GF+ E IVSE G+KAPNVVY+G+L+N + +A+KRF+R +WPD
Sbjct: 37 VPNFREYTLEQLKAATSGFAVEYIVSEHGEKAPNVVYKGKLENQKKIAVKRFTRMAWPDS 96
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
QF+ EA +G +R +R+ NL+GCC EGDERLLVA++MPN+TL+KHLFHW+ QP+ W MR
Sbjct: 97 RQFLEEARSVGQLRSERMANLLGCCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWTMR 156
Query: 163 VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA 222
+RV Y+AQAL++C S+ R LYHDLNAYRVLFDE+ +PRLS+FGLMKNSRDGKSYSTNLA
Sbjct: 157 LRVVLYLAQALEYCTSKGRTLYHDLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLA 216
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282
+TPPE+LRTGR+ PESVIYS+GT+LLDLLSGKHIPPSHALD+IR +NL L DS L+GQ+
Sbjct: 217 FTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQTLTDSCLDGQF 276
Query: 283 ANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSKAPVVLPTM 342
++ D T+LV LAS+CLQYEA++RP+ K L++A+ PLQK+TEV SHVLMGL + V P
Sbjct: 277 SDSDGTELVRLASRCLQYEARERPNTKSLVTALTPLQKETEVLSHVLMGLPHSGSVSP-- 334
Query: 343 LSSLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAFRD 402
LS LG+AC+R DLTA+ +IL K GYKD+EG NELSF WT Q+Q+ LN+KK GD+AFR
Sbjct: 335 LSPLGEACSRRDLTAMLEILEKLGYKDDEGVTNELSFHMWTDQMQESLNSKKKGDVAFRQ 394
Query: 403 KDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFY 462
KDF+ AIE Y++ + + S TV RR+L YLM + + AL DA+QAQV P W A Y
Sbjct: 395 KDFREAIECYTQFIDGGMI-SPTVCARRSLCYLMSDMPKEALDDAIQAQVISPVWHVASY 453
Query: 463 MQALALNKLGMETDAQDMLNDGASFEAKKQNSWRI 497
+Q+ +L LGME ++Q L +G++ EAK R+
Sbjct: 454 LQSASLGILGMEKESQIALKEGSNLEAKMNGVPRV 488
|
|
| TAIR|locus:2198160 BSK4 "brassinosteroid-signaling kinase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1332 (473.9 bits), Expect = 5.2e-136, P = 5.2e-136
Identities = 258/449 (57%), Positives = 344/449 (76%)
Query: 43 VPAFKEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDP 102
V +F+E+ L L+ AT+ F+ E +VSE G+ APNVVY+G+L+N+ +AIKRFS +WPDP
Sbjct: 35 VHSFREYSLEQLKIATSCFALENVVSEHGETAPNVVYQGKLENHMKIAIKRFSGTAWPDP 94
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
QF+ EA +G +R KR+ NL+G C EG ERLLVA++MPN+TL+KHLFHWD +P+ W MR
Sbjct: 95 RQFLEEARLVGQLRSKRMANLLGYCCEGGERLLVAEFMPNETLAKHLFHWDTEPMKWAMR 154
Query: 163 VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA 222
+RVA YI++AL++C++ LYHDLNAYRVLFDE+ +PRLS+FGLMKNSRDGKSYSTNLA
Sbjct: 155 LRVALYISEALEYCSNNGHTLYHDLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLA 214
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282
+TPPE+LRTGR+ ESVIYS+GT+LLDLL+GKHIPPSHALD+IR +NL L DS LEGQ+
Sbjct: 215 FTPPEYLRTGRITAESVIYSFGTLLLDLLTGKHIPPSHALDLIRDRNLQTLTDSCLEGQF 274
Query: 283 ANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSKAPVVLPTM 342
++ D T+LV L S CLQYEA++RP++K L++A+ LQK TEV SHVLMGL ++ +
Sbjct: 275 SDSDGTELVRLTSCCLQYEARERPNIKSLVTALISLQKDTEVLSHVLMGLPQSGT-FASP 333
Query: 343 LSSLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAFRD 402
S +AC+ DLT++ +IL K GYKD+E +LSF WT+Q+Q+ +N+KK GDIAFR
Sbjct: 334 PSPFAEACSGKDLTSMVEILEKIGYKDDE----DLSFM-WTEQMQEAINSKKKGDIAFRR 388
Query: 403 KDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFY 462
KDF AIE+Y++ + + + S TV VRR+ SYLM A+ AL DAM+AQ P W A Y
Sbjct: 389 KDFSEAIEFYTQFLDLGMI-SATVLVRRSQSYLMSNMAKEALDDAMKAQGISPVWYVALY 447
Query: 463 MQALALNKLGMETDAQDMLNDGASFEAKK 491
+Q+ AL+ LGME ++Q L +G+ EA+K
Sbjct: 448 LQSAALSVLGMEKESQIALTEGSILEARK 476
|
|
| TAIR|locus:2083499 BSK9 "brassinosteroid-signaling kinase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1284 (457.0 bits), Expect = 6.4e-131, P = 6.4e-131
Identities = 246/453 (54%), Positives = 330/453 (72%)
Query: 44 PAFKEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPH 103
P F EF L LR AT+GFS++ IVSE ++ PN+VY+G+L + R +A+KRF R SWPD
Sbjct: 24 PNFLEFSLEQLRVATDGFSADNIVSEHNERVPNIVYKGQLNDGRKIAVKRFQRLSWPDSL 83
Query: 104 QFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRV 163
+F+ EA +G R + + NLIGCC+EG ERLLVA+YMPN+TL+KHLFHW+K+P+ WEMR+
Sbjct: 84 EFIEEAQAVGRCRSEHMANLIGCCSEGHERLLVAEYMPNETLAKHLFHWEKRPMKWEMRL 143
Query: 164 RVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAY 223
RVA + A AL++CN LYHDLN YR+LFD+ G+PRLS FGLMK SR+GKSYSTNLA+
Sbjct: 144 RVALHTATALEYCNDWGIDLYHDLNTYRILFDKVGNPRLSCFGLMKCSREGKSYSTNLAF 203
Query: 224 TPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA 283
PPE+LR G VIPESV +S+GT+LLDL+SG+HIPP+HALD+ RGKN L+LMDS+L+GQ++
Sbjct: 204 APPEYLRLGTVIPESVTFSFGTLLLDLMSGRHIPPNHALDLFRGKNYLVLMDSALDGQFS 263
Query: 284 NEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSKAPVVL---- 339
+ED T+L+ LAS+CL+ E +RP +KFL+SA++ L+K+ E+ +V P
Sbjct: 264 DEDRTELIHLASRCLRPEPDERPSIKFLMSALSRLEKRAELWPNVKEENIPTPSYTEPAT 323
Query: 340 --PTMLSSLGKACARMDLTAVHDILLKTGY-KDEEGAENELSFQEWTQQVQDMLNTKKFG 396
P L+ G+AC R+DL+ +H++L K GY +D+ NE SFQ WT Q+Q+ ++ KK G
Sbjct: 324 KEPLPLTPFGEACWRVDLSGMHELLEKLGYGEDDVVVTNEFSFQMWTGQMQENMDYKKHG 383
Query: 397 DIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPE 456
D AFR KDF+ AIE+Y++ +S V S TV RR L YLM + AL DAMQ QV PE
Sbjct: 384 DAAFRAKDFETAIEFYTEFMSGAPVVSPTVLARRCLCYLMSDMFREALSDAMQTQVASPE 443
Query: 457 WPTAFYMQALALNKLGMETDAQDMLNDGASFEA 489
+ A Y+QA L KLGME +A++ L G+S EA
Sbjct: 444 FSIALYLQAACLLKLGMEAEAKEALRHGSSLEA 476
|
|
| TAIR|locus:2036426 BSK11 "brassinosteroid-signaling kinase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1274 (453.5 bits), Expect = 7.3e-130, P = 7.3e-130
Identities = 240/453 (52%), Positives = 331/453 (73%)
Query: 43 VPAFKEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRL---KNNRLVAIKRFSRQSW 99
VP F EF + LR ATN F+ +VS D+ PN+VY+G + K+ RL+A+K+FS+ +W
Sbjct: 54 VPDFSEFSASVLRDATNNFNKNAVVSVCSDQEPNLVYQGCIRSDKDKRLIAVKKFSKTTW 113
Query: 100 PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPW 159
PDP QF TEA +G++RH RLVNLIG C EGDERLLV++YMPN++L+KHLFHW+KQ + W
Sbjct: 114 PDPKQFATEARAIGSLRHVRLVNLIGYCCEGDERLLVSEYMPNESLTKHLFHWEKQTMEW 173
Query: 160 EMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYST 219
MR+RVA Y+A+AL++C KLYHDLN RVLFDE+G PRLS FG MKNS+DGK++ST
Sbjct: 174 AMRLRVALYVAEALEYCRQSGLKLYHDLNTCRVLFDENGSPRLSCFGWMKNSKDGKNFST 233
Query: 220 NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLE 279
NLAYTPPE+LR+G +IPESV++S+GT LLDLLSGKHIPPSHA+ I+ +NL +LMDS LE
Sbjct: 234 NLAYTPPEYLRSGTLIPESVVFSFGTFLLDLLSGKHIPPSHAVGTIQKQNLNVLMDSHLE 293
Query: 280 GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSKAPVV- 338
G Y EDA + +LASKCL +RP++ ++S + LQ++ +V S+ ++G+SK +
Sbjct: 294 GNYPEEDAAMVFDLASKCLHNNPNERPEIGDIISVITTLQQKLDVPSYTMLGISKLEKLE 353
Query: 339 LPTMLSSLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDI 398
+ S + AC +MDL A+H IL YK++E ELSFQ+W QQ++D+ NT++ GD
Sbjct: 354 MEHPKSLIYDACHQMDLAALHQILEAMEYKEDE-VTCELSFQQWAQQIKDVCNTRQQGDS 412
Query: 399 AFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWP 458
AFR+K F++AI+ Y++ + + + S TV+ RR++ YL +Q + ALRDAMQAQ +WP
Sbjct: 413 AFRNKHFESAIDKYTQFIEIGIMISPTVYARRSMCYLFCDQPDAALRDAMQAQCVYSDWP 472
Query: 459 TAFYMQALALNKLGMETDAQDMLNDGASFEAKK 491
TAFY+QA+AL+KL M D+ ML + E K+
Sbjct: 473 TAFYLQAVALSKLNMVEDSATMLKEALILEDKR 505
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.7.11 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 497 | |||
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 8e-32 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 2e-25 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-20 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 4e-20 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 3e-19 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 3e-19 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 4e-19 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 4e-15 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 4e-15 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 1e-14 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 2e-14 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 1e-13 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 4e-13 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 2e-12 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 9e-12 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 1e-11 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 2e-11 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 2e-11 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 3e-11 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 3e-11 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 3e-11 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 6e-11 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 8e-11 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 1e-10 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 1e-10 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 2e-10 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 5e-10 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 1e-09 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 2e-09 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 2e-09 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 3e-09 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 1e-08 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 2e-08 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 2e-08 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 2e-08 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 2e-08 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 3e-08 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 3e-08 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 4e-08 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 4e-08 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 5e-08 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 8e-08 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 8e-08 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 1e-07 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 1e-07 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 1e-07 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 2e-07 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 2e-07 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 2e-07 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 2e-07 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 2e-07 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 3e-07 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 3e-07 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 5e-07 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 6e-07 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 7e-07 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 9e-07 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 1e-06 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 1e-06 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 2e-06 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 2e-06 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 3e-06 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 3e-06 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 3e-06 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 3e-06 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 4e-06 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 5e-06 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 6e-06 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 6e-06 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 6e-06 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 7e-06 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 7e-06 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 9e-06 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 1e-05 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 1e-05 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 1e-05 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 1e-05 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 1e-05 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 2e-05 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 2e-05 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 2e-05 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 3e-05 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 3e-05 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 3e-05 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 3e-05 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 3e-05 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 3e-05 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 4e-05 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 4e-05 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 4e-05 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 4e-05 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 4e-05 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 4e-05 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 4e-05 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 5e-05 | |
| cd05595 | 323 | cd05595, STKc_PKB_beta, Catalytic domain of the Pr | 6e-05 | |
| PTZ00267 | 478 | PTZ00267, PTZ00267, NIMA-related protein kinase; P | 8e-05 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 8e-05 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 9e-05 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 1e-04 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 1e-04 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 1e-04 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 2e-04 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 2e-04 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 2e-04 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 2e-04 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 2e-04 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 2e-04 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 2e-04 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 2e-04 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 2e-04 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 3e-04 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 3e-04 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 4e-04 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 4e-04 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 4e-04 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 4e-04 | |
| cd05076 | 274 | cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do | 5e-04 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 5e-04 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 5e-04 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 5e-04 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 5e-04 | |
| cd05588 | 329 | cd05588, STKc_aPKC, Catalytic domain of the Protei | 6e-04 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 6e-04 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 7e-04 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 8e-04 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 0.001 | |
| cd05571 | 323 | cd05571, STKc_PKB, Catalytic domain of the Protein | 0.001 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 0.001 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 0.001 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 0.001 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 0.001 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 0.001 | |
| cd05618 | 329 | cd05618, STKc_aPKC_iota, Catalytic domain of the P | 0.002 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 0.002 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 0.002 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 0.002 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 0.002 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 0.002 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 0.003 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 0.003 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 0.003 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 0.004 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 0.004 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 0.004 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 8e-32
Identities = 58/246 (23%), Positives = 89/246 (36%), Gaps = 49/246 (19%)
Query: 77 VVYRGRLKN-NRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134
VY R K + VAIK ++ + + E L + H +V L G + +
Sbjct: 8 TVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLY 67
Query: 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYRVL 193
LV +Y +L L + L + +R+ I + L++ +S + H DL +L
Sbjct: 68 LVMEYCEGGSLKDLLKEN-EGKLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENIL 124
Query: 194 FDED-GDPRLSSFGLMKNSRDGKSYST----NLAYTPPEFLRTGRVIPESV-IYSYGTVL 247
D D G +L+ FGL K KS AY PE L E I+S G +L
Sbjct: 125 LDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVIL 184
Query: 248 LDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPD 307
+L +L +L K LQ + + RP
Sbjct: 185 YEL-------------------------------------PELKDLIRKMLQKDPEKRPS 207
Query: 308 VKFLLS 313
K +L
Sbjct: 208 AKEILE 213
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 2e-25
Identities = 63/249 (25%), Positives = 102/249 (40%), Gaps = 20/249 (8%)
Query: 77 VVYRGRLKN-NRLVAIKRF--SRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
VY+ + K ++VA+K + E L + H +V LI + D
Sbjct: 14 TVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDKDHL 73
Query: 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYRV 192
LV +Y L +L PL + ++A I + L++ +S + H DL +
Sbjct: 74 YLVMEYCEGGDLFDYLS--RGGPLSEDEAKKIALQILRGLEYLHSNG--IIHRDLKPENI 129
Query: 193 LFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESV-IYSYGTVL 247
L DE+G +++ FGL K S T TP PE L G V ++S G +L
Sbjct: 130 LLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVIL 189
Query: 248 LDLLSGKHIPPSHALD----VIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAK 303
+LL+GK + +IR L + +E+A L++ KCL +
Sbjct: 190 YELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKDLIK---KCLNKDPS 246
Query: 304 DRPDVKFLL 312
RP + +L
Sbjct: 247 KRPTAEEIL 255
|
Length = 260 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 91.1 bits (227), Expect = 1e-20
Identities = 61/250 (24%), Positives = 95/250 (38%), Gaps = 28/250 (11%)
Query: 77 VVYRGRLKN-NRLVAIKRFS-RQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134
VY R K +LVAIK ++ D + + E L ++H +V L + D+
Sbjct: 14 KVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLY 73
Query: 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVR-VAYYIAQALDHCNSQNRKLYHDL---NAY 190
LV +Y L L + L E R I AL++ +S+ ++ DL N
Sbjct: 74 LVMEYCEGGDLFDLLK--KRGRLS-EDEARFYLRQILSALEYLHSKG-IVHRDLKPEN-- 127
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN---LAYTPPEFLRTGRVIPESVIYSYGTVL 247
+L DEDG +L+ FGL + G+ +T Y PE L I+S G +L
Sbjct: 128 -ILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVIL 186
Query: 248 LDLLSGK-----HIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302
+LL+GK I + +A L+ K L +
Sbjct: 187 YELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEW----DISPEAKDLI---RKLLVKDP 239
Query: 303 KDRPDVKFLL 312
+ R + L
Sbjct: 240 EKRLTAEEAL 249
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 89.5 bits (223), Expect = 4e-20
Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 32/256 (12%)
Query: 77 VVYRGRLK-----NNRLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHKRLVNLIGCCAEG 130
VY+G LK VA+K + + + F+ EA+ + + H +V L+G C +G
Sbjct: 14 EVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQG 73
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNA 189
+ +V +YMP L L + L + +++A IA+ +++ S + H DL A
Sbjct: 74 EPLYIVTEYMPGGDLLDFL-RKHGEKLTLKDLLQMALQIAKGMEYLES--KNFVHRDLAA 130
Query: 190 YRVLFDEDGDPRLSSFGLMKNSRDGKSYST------NLAYTPPEFLRTGRVIPESVIYSY 243
L E+ ++S FGL ++ + Y + + PE L+ G+ +S ++S+
Sbjct: 131 RNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSF 190
Query: 244 GTVLLDLLSG-----KHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQ-LVELASKC 297
G +L ++ + + L+++ L E+ L EL +C
Sbjct: 191 GVLLWEIFTLGEQPYPGMSNEEVLELLEDGYRL----------PRPENCPDELYELMLQC 240
Query: 298 LQYEAKDRPDVKFLLS 313
Y+ +DRP L+
Sbjct: 241 WAYDPEDRPTFSELVE 256
|
Length = 258 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 86.8 bits (216), Expect = 3e-19
Identities = 58/247 (23%), Positives = 106/247 (42%), Gaps = 28/247 (11%)
Query: 77 VVYRGRLKNN-----RLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHKRLVNLIGCCAEG 130
VY+G LK VA+K + + F+ EA + + H +V L+G C E
Sbjct: 14 EVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE 73
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNA 189
+ ++V +YMP L +L + L + A IA+ +++ S+N H DL A
Sbjct: 74 EPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN--FIHRDLAA 131
Query: 190 YRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA-----YTPPEFLRTGRVIPESVIYSYG 244
L E+ ++S FGL ++ D Y + PE L+ G+ +S ++S+G
Sbjct: 132 RNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFG 191
Query: 245 TVLLDLLS-GK----HIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299
+L ++ + G+ + + L+ ++ L + L +L +C
Sbjct: 192 VLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKPPNCPPE---------LYKLMLQCWA 242
Query: 300 YEAKDRP 306
+ +DRP
Sbjct: 243 EDPEDRP 249
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 87.2 bits (217), Expect = 3e-19
Identities = 64/255 (25%), Positives = 107/255 (41%), Gaps = 35/255 (13%)
Query: 77 VVYRGRLKNN----RLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD 131
VY+G+LK VA+K S + F+ EA + + H +V L+G C E +
Sbjct: 10 EVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEE 69
Query: 132 ERLLVAQYMPNDTLSKHL-------FHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLY 184
LV +YM L +L +K L + + A IA+ +++ S+
Sbjct: 70 PLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK--FV 127
Query: 185 H-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPE 237
H DL A L ED ++S FGL ++ D Y + + PE L+ G +
Sbjct: 128 HRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSK 187
Query: 238 SVIYSYGTVLLDLLS-GKH----IPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292
S ++S+G +L ++ + G + L+ +R L + Y ++ L E
Sbjct: 188 SDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPE------YCPDE---LYE 238
Query: 293 LASKCLQYEAKDRPD 307
L C Q + +DRP
Sbjct: 239 LMLSCWQLDPEDRPT 253
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 86.4 bits (215), Expect = 4e-19
Identities = 58/250 (23%), Positives = 105/250 (42%), Gaps = 35/250 (14%)
Query: 77 VVYRGRLKNN-----RLVAIKRFSRQSWPDPHQ---FVTEAAGLGNVRHKRLVNLIGCCA 128
VY+G+LK VA+K + Q F+ EA + + H +V L+G C
Sbjct: 14 EVYKGKLKGKGGKKKVEVAVKTLKEDA--SEQQIEEFLREARIMRKLDHPNVVKLLGVCT 71
Query: 129 EGDERLLVAQYMPNDTLSKHL-FHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-D 186
E + +V +YM L +L + + L + A IA+ +++ S+N H D
Sbjct: 72 EEEPLYIVMEYMEGGDLLSYLRKN--RPKLSLSDLLSFALQIARGMEYLESKN--FIHRD 127
Query: 187 LNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA-----YTPPEFLRTGRVIPESVIY 241
L A L E+ ++S FGL ++ D Y + PE L+ G+ +S ++
Sbjct: 128 LAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKFTSKSDVW 187
Query: 242 SYGTVLLDLLS-GK----HIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296
S+G +L ++ + G+ + L+ ++ L + L +L +
Sbjct: 188 SFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQPP------NCPPE---LYDLMLQ 238
Query: 297 CLQYEAKDRP 306
C + +DRP
Sbjct: 239 CWAEDPEDRP 248
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 76.7 bits (187), Expect = 4e-15
Identities = 78/380 (20%), Positives = 130/380 (34%), Gaps = 35/380 (9%)
Query: 66 IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPH---QFVTEAAGLGNVRH-KRLV 121
I+ + G+ + VY ++ +LVA+K +++ +F+ E L ++ H +V
Sbjct: 4 ILRKLGEGSFGEVYLA--RDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIV 61
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHL-FHWDKQPLPWEMRVRVAYYIAQALDHCNSQN 180
L + LV +Y+ +L L K PL + + I AL++ +S+
Sbjct: 62 KLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK- 120
Query: 181 RKLYHDLNAYRVLFDEDGD-PRLSSFGLMKNSRDGKSYSTN----------LAYTPPEFL 229
++ D+ +L D DG +L FGL K D S S+ Y PE L
Sbjct: 121 GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVL 180
Query: 230 R---TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLL---------LMDSS 277
S I+S G L +LL+G PP + L + S
Sbjct: 181 LGLSLAYASSSSDIWSLGITLYELLTGL--PPFEGEKNSSATSQTLKIILELPTPSLASP 238
Query: 278 LEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSKAPV 337
L + +L K L + K+R LS L ++ L L K
Sbjct: 239 LSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS--HDLLAHLKLKESDLSDLLKPDD 296
Query: 338 VLPTMLSSLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGD 397
P LS A + I D+ EL+ + + +
Sbjct: 297 SAPLRLSLPPSLEALISSLNSLAISGSDLKLDDSNFSKELAPNGVSSSPHNSSSLLLSTA 356
Query: 398 IAFRDKDFKNAIEYYSKLVS 417
+ R K + +S
Sbjct: 357 SSKRSSLPKISARSSPSSLS 376
|
Length = 384 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 74.7 bits (184), Expect = 4e-15
Identities = 62/247 (25%), Positives = 109/247 (44%), Gaps = 22/247 (8%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V G + + VA+K S F+ EA+ + +RH LV L+G +G+ +V
Sbjct: 22 VMLGDYRGQK-VAVKCLKDDS-TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYRVLFDE 196
+YM +L +L + + ++ A + + +++ +N H DL A VL E
Sbjct: 80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN--FVHRDLAARNVLVSE 137
Query: 197 DGDPRLSSFGLMKNSRDG-KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKH 255
D ++S FGL K + G S + +T PE LR + +S ++S+G +L ++ S
Sbjct: 138 DLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 197
Query: 256 IP-PSHAL-DVIRGKNLLLLMDSSLEGQYANEDAT----QLVELASKCLQYEAKDRPDVK 309
+P P L DV+ +E Y E ++ ++ C + + RP K
Sbjct: 198 VPYPRIPLKDVVP----------HVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFK 247
Query: 310 FLLSAVA 316
L +A
Sbjct: 248 QLREQLA 254
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 73.6 bits (181), Expect = 1e-14
Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 5/184 (2%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G KN VAIK F E L +RHK L++L C+ G+ ++
Sbjct: 22 VWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+ M +L L + Q LP + +A +A+ + + QN ++ DL A +L ED
Sbjct: 82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN-SIHRDLAARNILVGED 140
Query: 198 GDPRLSSFGLMKNSRDG--KSYSTNLAY--TPPEFLRTGRVIPESVIYSYGTVLLDLLSG 253
+++ FGL + ++ S + Y T PE G +S ++S+G +L ++ +
Sbjct: 141 LVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTY 200
Query: 254 KHIP 257
+P
Sbjct: 201 GQVP 204
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 72.9 bits (179), Expect = 2e-14
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136
VY+G LK N VA+K PD + F+ EA L H +V LIG C + +V
Sbjct: 11 VYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIV 70
Query: 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNS----QNRKLYH-DLNAYR 191
+ +P +L L ++ + R+ V + +LD +++ H DL A
Sbjct: 71 MELVPGGSLLTFL----RKK---KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARN 123
Query: 192 VLFDEDGDPRLSSFGLMKNSRDGKSYSTN-------LAYTPPEFLRTGRVIPESVIYSYG 244
L E+ ++S FG M +G Y+ + + +T PE L GR ES ++SYG
Sbjct: 124 CLVGENNVLKISDFG-MSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYG 182
Query: 245 TVLLDLLSGKHIP 257
+L + S P
Sbjct: 183 ILLWETFSLGDTP 195
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 71.3 bits (175), Expect = 1e-13
Identities = 61/257 (23%), Positives = 109/257 (42%), Gaps = 33/257 (12%)
Query: 78 VYRGRLKNNR-----LVAIKRFSRQSWPDPHQ--FVTEAAGLGNVRHKRLVNLIGCCAEG 130
V R VA+K S + H+ F E L + H+ +V G C +
Sbjct: 20 VELCRYDPLGDNTGEQVAVKSL-NHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKP 78
Query: 131 DER--LLVAQYMPNDTLSKHL-FHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-D 186
R L+ +Y+P+ +L +L H D+ L + + I + +D+ +++ H D
Sbjct: 79 GGRSLRLIMEYLPSGSLRDYLQRHRDQINLK--RLLLFSSQICKGMDYL--GSQRYIHRD 134
Query: 187 LNAYRVLFDEDGDPRLSSFGLMK--NSRDGKSYSTNLAYTP-----PEFLRTGRVIPESV 239
L A +L + + ++S FGL K Y +P PE LRT + S
Sbjct: 135 LAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASD 194
Query: 240 IYSYGTVLLDLLS-GKH--IPPSHALDVI---RGKNLLLLMDSSLE-GQYANEDA---TQ 289
++S+G L +L + G PP+ L +I +G+ ++ + L+ G+ +
Sbjct: 195 VWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDE 254
Query: 290 LVELASKCLQYEAKDRP 306
+ +L C + E +DRP
Sbjct: 255 VYDLMKLCWEAEPQDRP 271
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 68.8 bits (169), Expect = 4e-13
Identities = 56/245 (22%), Positives = 98/245 (40%), Gaps = 17/245 (6%)
Query: 77 VVYRGRLKNNR-LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
VY+ R K VAIK +S + + E L +H +V G + DE +
Sbjct: 15 EVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWI 74
Query: 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIA---QALDHCNSQNRKLYHDLNAYRV 192
V ++ +L L Q L +AY + L++ +S ++ D+ A +
Sbjct: 75 VMEFCSGGSLKDLLKST-NQTLTESQ---IAYVCKELLKGLEYLHSNG-IIHRDIKAANI 129
Query: 193 LFDEDGDPRLSSFGL---MKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLD 249
L DG+ +L FGL + +++ + + PE + ++ I+S G ++
Sbjct: 130 LLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIE 189
Query: 250 LLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQ-LVELASKCLQYEAKDRPDV 308
L GK PP L ++ L + + G E + + KCLQ + RP
Sbjct: 190 LAEGK--PPYSELPPMKA--LFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTA 245
Query: 309 KFLLS 313
+ LL
Sbjct: 246 EQLLK 250
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 67.2 bits (164), Expect = 2e-12
Identities = 56/241 (23%), Positives = 107/241 (44%), Gaps = 24/241 (9%)
Query: 78 VYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136
VY G K + VA+K + +F+ EAA + ++H LV L+G C ++
Sbjct: 22 VYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 80
Query: 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE 196
++M L +L ++Q + + + +A I+ A+++ +N ++ DL A L E
Sbjct: 81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGE 139
Query: 197 DGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+ +++ FGL + G +Y+ + + +T PE L + +S ++++G +L ++
Sbjct: 140 NHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 198
Query: 251 LSGKHIP-PSHALDVIRGKNLLLLMDSSLEGQYANED----ATQLVELASKCLQYEAKDR 305
+ P P L + LE Y E ++ EL C Q+ DR
Sbjct: 199 ATYGMSPYPGIDLSQVYEL---------LEKGYRMERPEGCPPKVYELMRACWQWNPSDR 249
Query: 306 P 306
P
Sbjct: 250 P 250
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 67.2 bits (164), Expect = 9e-12
Identities = 64/247 (25%), Positives = 112/247 (45%), Gaps = 33/247 (13%)
Query: 79 YRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138
Y+G+ N + + + P + + +G ++H +V LIG C L+ +
Sbjct: 707 YKGKSIKNGMQFVVKEINDVNSIPSSEIAD---MGKLQHPNIVKLIGLCRSEKGAYLIHE 763
Query: 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALD--HCNSQNRKLYHDLNAYRVLFDE 196
Y+ LS+ L + L WE R ++A IA+AL HC + +L+ +++ D
Sbjct: 764 YIEGKNLSEVL-----RNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDG 818
Query: 197 DGDPRL--SSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGK 254
+P L S GL+ D K + ++ AY PE T + +S IY +G +L++LL+GK
Sbjct: 819 KDEPHLRLSLPGLL--CTDTKCFISS-AYVAPETRETKDITEKSDIYGFGLILIELLTGK 875
Query: 255 HIPPSHALDVIRGK------------NLLLLMDSSLEGQYANEDATQLVE---LASKCLQ 299
P+ A + G +L + +D S+ G + + ++VE LA C
Sbjct: 876 S--PADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGD-VSVNQNEIVEVMNLALHCTA 932
Query: 300 YEAKDRP 306
+ RP
Sbjct: 933 TDPTARP 939
|
Length = 968 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 1e-11
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 37/221 (16%)
Query: 65 LIVSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRH 117
++ E G+ A V+ G + LVA+K + D + F EA L N +H
Sbjct: 8 VLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQH 67
Query: 118 KRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL------------FHWDKQPLPWEMRVRV 165
+ +V G C EGD ++V +YM + L+K L L +++
Sbjct: 68 ENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQI 127
Query: 166 AYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN----- 220
A IA + + SQ ++ DL L D ++ FG+ SRD Y+T+
Sbjct: 128 AVQIASGMVYLASQ-HFVHRDLATRNCLVGYDLVVKIGDFGM---SRD--VYTTDYYRVG 181
Query: 221 ------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GK 254
+ + PPE + + ES ++S+G VL ++ + GK
Sbjct: 182 GHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGK 222
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 2e-11
Identities = 58/250 (23%), Positives = 114/250 (45%), Gaps = 24/250 (9%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136
VV G+ + VAIK S + +F+ EA + + H++LV L G C + +V
Sbjct: 19 VVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIV 77
Query: 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE 196
+YM N L +L K+ P ++ + + + + + + S+ + ++ DL A L D+
Sbjct: 78 TEYMSNGCLLNYLREHGKRFQPSQL-LEMCKDVCEGMAYLESK-QFIHRDLAARNCLVDD 135
Query: 197 DGDPRLSSFGLMKNSRDGKSYST-----NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
G ++S FGL + D + S+ + ++PPE L + +S ++++G ++ ++
Sbjct: 136 QGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVY 195
Query: 252 SGKHIP------PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDR 305
S +P V +G L A+E ++ C +A++R
Sbjct: 196 SLGKMPYERFNNSETVEKVSQGLRL-------YRPHLASEKVYAIM---YSCWHEKAEER 245
Query: 306 PDVKFLLSAV 315
P + LLS++
Sbjct: 246 PTFQQLLSSI 255
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 64.2 bits (156), Expect = 2e-11
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 19/214 (8%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR 164
F+ E A + + HK LV L+G + +V + M L L + + ++
Sbjct: 46 FLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQ 104
Query: 165 VAYYIAQALDHCNSQNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMK-NSRDGKSYSTNLA 222
+ +A+ +++ S +KL H DL A +L EDG ++S FGL + S + +
Sbjct: 105 FSLDVAEGMEYLES--KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVK 162
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQ 281
+T PE L+ + +S ++SYG +L ++ S G+ P +L ++ +E
Sbjct: 163 WTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVK---------ECVEKG 213
Query: 282 YANEDATQ----LVELASKCLQYEAKDRPDVKFL 311
Y E + L + C + E K RP L
Sbjct: 214 YRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKL 247
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 3e-11
Identities = 58/250 (23%), Positives = 105/250 (42%), Gaps = 27/250 (10%)
Query: 77 VVYRGRLKNN-RLVAIKR--FSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
VV++ K + R+ A+K+ S+ + + + + EA L + ++ + +
Sbjct: 15 VVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKL 74
Query: 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVL 193
+V +Y N L K L +PLP + R I L H +S + L+ D+ + +
Sbjct: 75 NIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS-KKILHRDIKSLNLF 133
Query: 194 FDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSYGTVLLD 249
D + ++ G+ K D +++ + TP PE +S +++ G VL +
Sbjct: 134 LDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYE 193
Query: 250 LLSGKHIPPSHA-------LDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302
+GKH P A L +IRG + Y + QL +L +CL +
Sbjct: 194 CCTGKH--PFDANNQGALILKIIRGVF------PPVSQMY----SQQLAQLIDQCLTKDY 241
Query: 303 KDRPDVKFLL 312
+ RPD LL
Sbjct: 242 RQRPDTFQLL 251
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 63.1 bits (153), Expect = 3e-11
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 3/155 (1%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERL-LVAQYMPNDTLSKHLFHWDKQPLPWEMRV 163
F+ EA+ + +RH LV L+G E L +V +YM +L +L + L + +
Sbjct: 46 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 105
Query: 164 RVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYST-NLA 222
+ + + +A+++ + N ++ DL A VL ED ++S FGL K + + +
Sbjct: 106 KFSLDVCEAMEYLEANNF-VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK 164
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP 257
+T PE LR + +S ++S+G +L ++ S +P
Sbjct: 165 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 63.6 bits (155), Expect = 3e-11
Identities = 66/237 (27%), Positives = 104/237 (43%), Gaps = 48/237 (20%)
Query: 48 EFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRL--KNNRL----VAIKRFSRQSWPD 101
E L+ +R F EL G+ A VY+G L N RL VAIK + P
Sbjct: 1 EIPLSAVR-----FLEEL-----GEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPK 50
Query: 102 PHQ-FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLF----HWD--- 153
Q F EA + +++H +V L+G C + ++ +Y+ + L + L H D
Sbjct: 51 VQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGA 110
Query: 154 -------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFG 206
K L + +A IA +++ +S + ++ DL A L E ++S FG
Sbjct: 111 ESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHF-VHRDLAARNCLVGEGLTVKISDFG 169
Query: 207 LMKNSRDGKSYSTN-----------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
L SRD YS + + + PPE + G+ ES I+S+G VL ++ S
Sbjct: 170 L---SRDI--YSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFS 221
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 6e-11
Identities = 45/187 (24%), Positives = 88/187 (47%), Gaps = 11/187 (5%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G N VA+K + DP F+ EA + +RH +L+ L C + +V
Sbjct: 22 VWEGLWNNTTPVAVKTLKPGTM-DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+ M +L ++L + L + +A +A + + +QN ++ DL A VL E+
Sbjct: 81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNY-IHRDLAARNVLVGEN 139
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R+G + + +T PE R +S ++S+G +L ++
Sbjct: 140 NICKVADFGLARVIKEDIYEAREGAKFP--IKWTAPEAALYNRFSIKSDVWSFGILLTEI 197
Query: 251 LSGKHIP 257
++ +P
Sbjct: 198 VTYGRMP 204
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 8e-11
Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 19/189 (10%)
Query: 78 VYRGRLKNNR----LVAIKR----FSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE 129
V RGRLK VAIK S + D F+TEA+ +G H ++ L G +
Sbjct: 20 VCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLD---FLTEASIMGQFDHPNIIRLEGVVTK 76
Query: 130 GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNA 189
+++ +YM N +L K L D + V + IA + + + N ++ DL A
Sbjct: 77 SRPVMIITEYMENGSLDKFLRENDGK-FTVGQLVGMLRGIASGMKYLSEMNY-VHRDLAA 134
Query: 190 YRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTN-----LAYTPPEFLRTGRVIPESVIYSY 243
+L + + ++S FGL + D ++ Y+T + +T PE + + S ++S+
Sbjct: 135 RNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSF 194
Query: 244 GTVLLDLLS 252
G V+ +++S
Sbjct: 195 GIVMWEVMS 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 61.7 bits (150), Expect = 1e-10
Identities = 67/263 (25%), Positives = 114/263 (43%), Gaps = 19/263 (7%)
Query: 63 SEL-IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLV 121
SEL + E G VV+ G+ + VAIK + + F+ EA + + H LV
Sbjct: 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSE-DDFIEEAKVMMKLSHPNLV 62
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNR 181
L G C + +V +YM N L +L K L E + + + +A+++ S N
Sbjct: 63 QLYGVCTKQRPIFIVTEYMANGCLLNYL-RERKGKLGTEWLLDMCSDVCEAMEYLES-NG 120
Query: 182 KLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN-----LAYTPPEFLRTGRVIP 236
++ DL A L ED ++S FGL + D + S+ + + PPE R
Sbjct: 121 FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSS 180
Query: 237 ESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEG---QYANEDATQLVEL 293
+S ++S+G ++ ++ S +P R N ++ +S G T++ +
Sbjct: 181 KSDVWSFGVLMWEVFSEGKMPYE------RFSNSEVV-ESVSAGYRLYRPKLAPTEVYTI 233
Query: 294 ASKCLQYEAKDRPDVKFLLSAVA 316
C + +DRP K LLS +
Sbjct: 234 MYSCWHEKPEDRPAFKKLLSQLT 256
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 61.6 bits (149), Expect = 1e-10
Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 12/183 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQ--FVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
V++G LK+ VA+K ++ P + F++EA L H +V LIG C + +
Sbjct: 11 VFKGTLKDKTPVAVKT-CKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYI 69
Query: 136 VAQYMPN-DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194
V + +P D LS K L + V+ A A + + S+N ++ DL A L
Sbjct: 70 VMELVPGGDFLS--FLRKKKDELKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLV 126
Query: 195 DEDGDPRLSSFGLMKNSRDGKSYSTNLA-----YTPPEFLRTGRVIPESVIYSYGTVLLD 249
E+ ++S FG+ + DG S+ L +T PE L GR ES ++SYG +L +
Sbjct: 127 GENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWE 186
Query: 250 LLS 252
S
Sbjct: 187 TFS 189
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 2e-10
Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 11/196 (5%)
Query: 71 GDKAPNVVYRGR-LKNNRLVAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCC 127
G+ VVY+ R +VAIK+ +S P + E L + H ++ L+
Sbjct: 8 GEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVF 67
Query: 128 AEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDL 187
+ LV ++M DT L ++ LP + Y + Q L C+S + L+ DL
Sbjct: 68 RHKGDLYLVFEFM--DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHS-HGILHRDL 124
Query: 188 NAYRVLFDEDGDPRLSSFGLMKNSR-DGKSYSTNLA---YTPPEFLRTGRVIPESV-IYS 242
+L + +G +L+ FGL ++ + Y+ + Y PE L + V I+S
Sbjct: 125 KPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWS 184
Query: 243 YGTVLLDLLSGKHIPP 258
G + +LLS + + P
Sbjct: 185 VGCIFAELLSRRPLFP 200
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 59.5 bits (144), Expect = 5e-10
Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 28/249 (11%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G + VAIK +Q P F+ EA + ++H RLV L + + ++
Sbjct: 22 VWMGYYNGHTKVAIKSL-KQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQ-EPIYIIT 79
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM N +L L + L + +A IA+ + +N ++ DL A +L E
Sbjct: 80 EYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSET 138
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R+G + + +T PE + G +S ++S+G +L ++
Sbjct: 139 LCCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 196
Query: 251 LSGKHIP-PSHA-LDVIRGKNLLLLMDSSLEGQY----ANEDATQLVELASKCLQYEAKD 304
++ IP P +VI+ +LE Y + +L EL C + + ++
Sbjct: 197 VTYGRIPYPGMTNPEVIQ----------NLERGYRMPRPDNCPEELYELMRLCWKEKPEE 246
Query: 305 RPDVKFLLS 313
RP ++L S
Sbjct: 247 RPTFEYLRS 255
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 1e-09
Identities = 57/241 (23%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G VAIK + P F+ EA + +RH++LV L +E + +V
Sbjct: 22 VWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 79
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM +L L + L V +A IA + + N ++ DL A +L E+
Sbjct: 80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGEN 138
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R G + + +T PE GR +S ++S+G +L +L
Sbjct: 139 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 196
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
+ +P ++ + +L ++ E L +L +C + E ++RP ++
Sbjct: 197 TTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 252
Query: 311 L 311
L
Sbjct: 253 L 253
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 58.0 bits (141), Expect = 2e-09
Identities = 56/248 (22%), Positives = 96/248 (38%), Gaps = 21/248 (8%)
Query: 78 VYRGRLKNN-RLVAIK--RFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCC--AEGDE 132
VY K+ L+A+K S S + E L +++H +V G E +
Sbjct: 16 VYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNT 75
Query: 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV-AYYIAQALDHCNSQNRKLYH-DLNAY 190
+ +Y+ +LS L LP E +R I + L + +S + H D+
Sbjct: 76 LNIFLEYVSGGSLSSLLK--KFGKLP-EPVIRKYTRQILEGLAYLHSNG--IVHRDIKGA 130
Query: 191 RVLFDEDGDPRLSSFGLMK------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYG 244
+L D DG +L+ FG K S + PE +R + I+S G
Sbjct: 131 NILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLG 190
Query: 245 TVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKD 304
++++ +GK P S + + L + S + + + + KCL+ + K
Sbjct: 191 CTVIEMATGKP-PWSELGNPM--AALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKK 247
Query: 305 RPDVKFLL 312
RP LL
Sbjct: 248 RPTADELL 255
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 58.4 bits (141), Expect = 2e-09
Identities = 59/245 (24%), Positives = 104/245 (42%), Gaps = 24/245 (9%)
Query: 88 LVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHKRLVNLIGCCAEGDER--LLVAQYMPNDT 144
+VA+K R+ + E L + H+ +V GCC+E + L+ +Y+P +
Sbjct: 35 MVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGS 94
Query: 145 LSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSS 204
L +L K L + A I + + + +SQ ++ DL A VL D D ++
Sbjct: 95 LRDYL---PKHKLNLAQLLLFAQQICEGMAYLHSQ-HYIHRDLAARNVLLDNDRLVKIGD 150
Query: 205 FGLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS---GK 254
FGL K +G Y + + + E L+ + S ++S+G L +LL+ K
Sbjct: 151 FGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSK 210
Query: 255 HIPPSHALDVIRGK----NLLLLMDSSLEGQY---ANEDATQLVELASKCLQYEAKDRPD 307
PP ++I K ++ L++ G ++ L C + EAK RP
Sbjct: 211 QSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPT 270
Query: 308 VKFLL 312
+ L+
Sbjct: 271 FRSLI 275
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 3e-09
Identities = 65/271 (23%), Positives = 112/271 (41%), Gaps = 35/271 (12%)
Query: 63 SEL-IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLV 121
SEL +V E G +V+ G R VAIK R+ F+ EA + + H +LV
Sbjct: 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTI-REGAMSEEDFIEEAQVMMKLSHPKLV 62
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQA-----LDHC 176
L G C E LV ++M + LS +L R + + + LD C
Sbjct: 63 QLYGVCTERSPICLVFEFMEHGCLSDYL------------RAQRGKFSQETLLGMCLDVC 110
Query: 177 N-----SQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN-----LAYTPP 226
+ ++ DL A L E+ ++S FG+ + D + S+ + ++ P
Sbjct: 111 EGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSP 170
Query: 227 EFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANED 286
E + +S ++S+G ++ ++ S P + R + ++ ++ Y
Sbjct: 171 EVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYEN-----RSNSEVVETINAGFRLYKPRL 225
Query: 287 ATQLV-ELASKCLQYEAKDRPDVKFLLSAVA 316
A+Q V EL C + +DRP LL +A
Sbjct: 226 ASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 1e-08
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 19/212 (8%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR 164
F A+ + + HK LV G C GDE ++V +Y+ +L +L +K + ++
Sbjct: 46 FFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYL-KKNKNLINISWKLE 104
Query: 165 VAYYIAQALDHCNSQNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYST---- 219
VA +A AL +++ L H ++ A VL + D + + +K S G S +
Sbjct: 105 VAKQLAWALHFL--EDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKE 162
Query: 220 ----NLAYTPPEFLRTGRVIP-ESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLM 274
+ + PPE + + + + +S+GT L ++ SG P S ALD + L
Sbjct: 163 ILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLS-ALDSQKK---LQFY 218
Query: 275 DSSLEGQYANEDATQLVELASKCLQYEAKDRP 306
+ Q T+L L ++C+ YE RP
Sbjct: 219 EDRH--QLPAPKWTELANLINQCMDYEPDFRP 248
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 2e-08
Identities = 61/245 (24%), Positives = 103/245 (42%), Gaps = 28/245 (11%)
Query: 78 VYRGRLK-NNRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
V+ GRL+ +N VA+K PD +F+ EA L H +V LIG C + +
Sbjct: 11 VFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 70
Query: 136 VAQYMPN-DTLSKHLFHWDKQP-LPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVL 193
V + + D L+ F + P L + +++ A +++ S++ ++ DL A L
Sbjct: 71 VMELVQGGDFLT---FLRTEGPRLKVKELIQMVENAAAGMEYLESKH-CIHRDLAARNCL 126
Query: 194 FDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVL 247
E ++S FG+ + DG ST + +T PE L GR ES ++S+G +L
Sbjct: 127 VTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILL 186
Query: 248 LDLLSGKHIP-----PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302
+ S +P + I L + + Y L +C +Y+
Sbjct: 187 WEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPDAVY---------RLMERCWEYDP 237
Query: 303 KDRPD 307
RP
Sbjct: 238 GQRPS 242
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 55.4 bits (134), Expect = 2e-08
Identities = 51/195 (26%), Positives = 94/195 (48%), Gaps = 18/195 (9%)
Query: 71 GDKAPNVVYRGR-LKNNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCC 127
G+ A +V++ + + VA+K+ + + P+Q + E L +H +V L+
Sbjct: 9 GEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVF 68
Query: 128 AEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALD---HCNSQNRKLY 184
G +LV +YMP+D LS+ L + +PLP +V Y+ L + ++ N ++
Sbjct: 69 PHGSGFVLVMEYMPSD-LSEVLRDEE-RPLP---EAQVKSYMRMLLKGVAYMHA-NGIMH 122
Query: 185 HDLNAYRVLFDEDGDPRLSSFGL--MKNSRDGKSYSTNLA---YTPPEFLRTGRVIPESV 239
DL +L DG +++ FGL + + + + YS +A Y PE L R V
Sbjct: 123 RDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGV 182
Query: 240 -IYSYGTVLLDLLSG 253
+++ G + +LL+G
Sbjct: 183 DLWAVGCIFAELLNG 197
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 54.8 bits (133), Expect = 2e-08
Identities = 61/256 (23%), Positives = 105/256 (41%), Gaps = 46/256 (17%)
Query: 82 RLKNNRLVAIKR--FSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139
R + +L +K S S + + E L + H ++ E + +V +Y
Sbjct: 21 RKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80
Query: 140 MPNDTLSKHL--FHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQNRKLYH-DLNAYRVL 193
LS+ + + +P P E + + Q AL + +S RK+ H D+ +
Sbjct: 81 ADGGDLSQKIKKQKKEGKPFPEEQ---ILDWFVQLCLALKYLHS--RKILHRDIKPQNIF 135
Query: 194 FDEDGDPRLSSFGLMKNSRDGKSYSTNLAY------TP----PEFLRTGRVIP---ESVI 240
+G +L FG+ K S+ + TP PE + P +S I
Sbjct: 136 LTSNGLVKLGDFGI------SKVLSSTVDLAKTVVGTPYYLSPELCQ---NKPYNYKSDI 186
Query: 241 YSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA---NEDATQLVELASKC 297
+S G VL +L + KH G+NLL L L+GQY ++ +++L L S
Sbjct: 187 WSLGCVLYELCTLKH--------PFEGENLLELALKILKGQYPPIPSQYSSELRNLVSSL 238
Query: 298 LQYEAKDRPDVKFLLS 313
LQ + ++RP + +L
Sbjct: 239 LQKDPEERPSIAQILQ 254
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 2e-08
Identities = 62/250 (24%), Positives = 102/250 (40%), Gaps = 27/250 (10%)
Query: 77 VVYRG-RLKNNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
VVY+G L+ VAIK+ S + + E L N++H +V IG D
Sbjct: 15 VVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSL 74
Query: 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALD-----HCNSQNRKLYH-DL 187
++ +Y N +L + + + P E V A Y+ Q L H + + H D+
Sbjct: 75 YIILEYAENGSLRQIIKKFGPFP---ESLV--AVYVYQVLQGLAYLH----EQGVIHRDI 125
Query: 188 NAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSY 243
A +L +DG +L+ FG+ D ++ TP PE + S I+S
Sbjct: 126 KAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSL 185
Query: 244 GTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAK 303
G +++LL+G PP + L+ L + + +L + +C Q +
Sbjct: 186 GCTVIELLTGN--PPYYDLN---PMAALFRIVQDDHPPLPEGISPELKDFLMQCFQKDPN 240
Query: 304 DRPDVKFLLS 313
RP K LL
Sbjct: 241 LRPTAKQLLK 250
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 3e-08
Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 11/187 (5%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G VA+K + P F+ EA + +RH +LV L C+E + +V
Sbjct: 22 VWMGTWNGTTKVAVKTL-KPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM +L L + + L V +A IA+ + + S+N ++ DL A +L E+
Sbjct: 81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNY-IHRDLAARNILVGEN 139
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R+G + + +T PE GR +S ++S+G +L ++
Sbjct: 140 LVCKIADFGLARLIEDDEYTAREGAKFP--IKWTAPEAANYGRFTIKSDVWSFGILLTEI 197
Query: 251 LSGKHIP 257
++ +P
Sbjct: 198 VTYGRVP 204
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 3e-08
Identities = 55/244 (22%), Positives = 108/244 (44%), Gaps = 18/244 (7%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G N VA+K + P F+ EA + +RH +LV L +E + +V
Sbjct: 22 VWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVT 79
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM +L L + + L V +A +A + + N ++ DL + +L +
Sbjct: 80 EYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY-IHRDLRSANILVGDG 138
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R G + + +T PE GR +S ++S+G +L +L
Sbjct: 139 LVCKIADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 196
Query: 251 LSGKHIP-PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVK 309
++ +P P + + +L ++ + L EL +C + + ++RP +
Sbjct: 197 VTKGRVPYPG-----MNNREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFE 251
Query: 310 FLLS 313
+L S
Sbjct: 252 YLQS 255
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 53.9 bits (129), Expect = 4e-08
Identities = 55/243 (22%), Positives = 105/243 (43%), Gaps = 16/243 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G VAIK + P F+ EA + +RH +LV L +E + +V
Sbjct: 22 VWMGTWNGTTKVAIKTLKPGTM-MPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVT 79
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M +L L D + L V +A IA + + N ++ DL A +L ++
Sbjct: 80 EFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNY-IHRDLRAANILVGDN 138
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R G + + +T PE GR +S ++S+G +L +L
Sbjct: 139 LVCKIADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 196
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
++ +P ++ + +L ++ L EL C + + +RP ++
Sbjct: 197 VTKGRVPYPGMVN----REVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEY 252
Query: 311 LLS 313
+ S
Sbjct: 253 IQS 255
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 54.3 bits (130), Expect = 4e-08
Identities = 53/223 (23%), Positives = 96/223 (43%), Gaps = 31/223 (13%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDER------LLVAQYMPNDTLSKHLFH--WDKQP 156
F++EA + H ++ LIG C + E +++ +M + L L + P
Sbjct: 47 FLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCP 106
Query: 157 --LPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214
LP +M V+ IA +++ +S++ ++ DL A + +E+ + ++ FGL K +G
Sbjct: 107 QYLPTQMLVKFMTDIASGMEYLSSKSF-IHRDLAARNCMLNENMNVCVADFGLSKKIYNG 165
Query: 215 KSYSTN-LAYTPPEFLR----TGRV-IPESVIYSYGTVLLDLLSGKHIP-----PSHALD 263
Y +A P +++ RV +S ++S+G + ++ + P S D
Sbjct: 166 DYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYD 225
Query: 264 VIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306
+R N L L+G Y L S C KDRP
Sbjct: 226 YLRQGNRLKQPPDCLDGLY---------SLMSSCWLLNPKDRP 259
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 53.9 bits (129), Expect = 5e-08
Identities = 65/260 (25%), Positives = 109/260 (41%), Gaps = 34/260 (13%)
Query: 88 LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSK 147
LVA+K S F EA L N++H+ +V G C EGD ++V +YM + L+K
Sbjct: 37 LVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNK 96
Query: 148 HL--------FHWDKQP---LPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE 196
L + L + +A IA + + SQ+ ++ DL L E
Sbjct: 97 FLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHF-VHRDLATRNCLVGE 155
Query: 197 DGDPRLSSFGLMKNSRDGKSYSTN-----------LAYTPPEFLRTGRVIPESVIYSYGT 245
+ ++ FG+ SRD YST+ + + PPE + + ES ++S G
Sbjct: 156 NLLVKIGDFGM---SRD--VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGV 210
Query: 246 VLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKD 304
VL ++ + GK P + L ++ + Q ++ +L C Q E
Sbjct: 211 VLWEIFTYGKQ--PWYQLS---NNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHM 265
Query: 305 RPDVKFLLSAVAPLQKQTEV 324
R ++K + S + L K + V
Sbjct: 266 RLNIKEIHSLLQNLAKASPV 285
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 8e-08
Identities = 57/266 (21%), Positives = 110/266 (41%), Gaps = 35/266 (13%)
Query: 84 KNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPND 143
K+ LVA+K + F EA L N++H+ +V G C +GD ++V +YM +
Sbjct: 33 KDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHG 92
Query: 144 TLSKHL--------FHWDKQP------LPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNA 189
L+K L D QP L + +A IA + + SQ+ ++ DL
Sbjct: 93 DLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHF-VHRDLAT 151
Query: 190 YRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSY 243
L + ++ FG+ ++ Y + + PPE + + ES ++S+
Sbjct: 152 RNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 211
Query: 244 GTVLLDLLS-GK----HIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCL 298
G +L ++ + GK + + ++ I +L + ++ ++ C
Sbjct: 212 GVILWEIFTYGKQPWFQLSNTEVIECITQGRVL---------ERPRVCPKEVYDIMLGCW 262
Query: 299 QYEAKDRPDVKFLLSAVAPLQKQTEV 324
Q E + R ++K + + L K T +
Sbjct: 263 QREPQQRLNIKEIYKILHALGKATPI 288
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 8e-08
Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 12/147 (8%)
Query: 117 HKRLVNLIGCCAEGDERL-LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---A 172
H R + + + L LV M L H+++ D++ P R +Y AQ
Sbjct: 51 HSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEEN-PGFPEPRACFYTAQIISG 109
Query: 173 LDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEF 228
L+H + Q R +Y DL VL D DG+ R+S GL +DG+S + A TP PE
Sbjct: 110 LEHLH-QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPEL 168
Query: 229 LRTGRVIPESVIY-SYGTVLLDLLSGK 254
L+ G SV Y + G L ++++ +
Sbjct: 169 LQ-GEEYDFSVDYFALGVTLYEMIAAR 194
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 1e-07
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 28/192 (14%)
Query: 88 LVAIKRFSRQSWPDPH-QFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLS 146
+VA+K ++ D F EAA + H +V L+G CA G L+ +YM L+
Sbjct: 37 MVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLN 96
Query: 147 KHLFH--------------------WDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHD 186
+ L H + PL ++ +A +A + + S+ + ++ D
Sbjct: 97 EFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYL-SERKFVHRD 155
Query: 187 LNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVI 240
L L E+ +++ FGL +N Y + + + PPE + R ES +
Sbjct: 156 LATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDV 215
Query: 241 YSYGTVLLDLLS 252
++YG VL ++ S
Sbjct: 216 WAYGVVLWEIFS 227
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 1e-07
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 18/152 (11%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP--- 225
I + LD+ +S+ RK++ D+ A VL E GD +L+ FG+ D + TP
Sbjct: 110 ILKGLDYLHSE-RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWM 168
Query: 226 -PEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDS----SLEG 280
PE ++ ++ I+S G ++L G+ PP+ L +R +L L+ +LEG
Sbjct: 169 APEVIKQSAYDFKADIWSLGITAIELAKGE--PPNSDLHPMR---VLFLIPKNSPPTLEG 223
Query: 281 QYANEDATQLVELASKCLQYEAKDRPDVKFLL 312
QY+ E CL + + RP K LL
Sbjct: 224 QYSKP----FKEFVEACLNKDPRFRPTAKELL 251
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 1e-07
Identities = 49/223 (21%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 112 LGNVRHKRLVNLIGCCAEGDER--LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYI 169
L N+ H+ +V G C E L+ +++P+ +L ++L +K + + +++ A I
Sbjct: 60 LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPR-NKNKINLKQQLKYAVQI 118
Query: 170 AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYST-------NLA 222
+ +D+ S+ ++ DL A VL + + ++ FGL K K Y T +
Sbjct: 119 CKGMDYLGSRQY-VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVF 177
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSG------------KHIPPSHA-LDVIRGKN 269
+ PE L + S ++S+G L +LL+ K I P+H + V R
Sbjct: 178 WYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTR--- 234
Query: 270 LLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLL 312
L+ +++ ++ +L KC +++ R + L+
Sbjct: 235 LVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLI 277
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 52.2 bits (126), Expect = 2e-07
Identities = 57/264 (21%), Positives = 107/264 (40%), Gaps = 29/264 (10%)
Query: 66 IVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDP-HQFVTEAAGLGNVRHKRLVNL 123
V G + VVY+ R K ++ A+K+ + Q + E L + +V
Sbjct: 5 RVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKC 64
Query: 124 IGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKL 183
G + E +V +YM +L+ +P + +A I + LD+ +++ +
Sbjct: 65 YGAFYKEGEISIVLEYMDGGSLAD--LLKKVGKIPEPVLAYIARQILKGLDYLHTKRHII 122
Query: 184 YHDLNAYRVLFDEDGDPRLSSFG---LMKNSRDGK-SYSTNLAYTPPEFLRTGRVIPE-- 237
+ D+ +L + G+ +++ FG +++N+ D ++ + Y PE R+ E
Sbjct: 123 HRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPE-----RIQGESY 177
Query: 238 ---SVIYSYGTVLLDLLSGKH-IPPSHALDVIRGKNLLL-LMDS---SLEGQYANEDATQ 289
+ I+S G LL+ GK P L+ + D SL + + +
Sbjct: 178 SYAADIWSLGLTLLECALGKFPFLPPGQPSFF---ELMQAICDGPPPSLPAEEFSPEFRD 234
Query: 290 LVELASKCLQYEAKDRPDVKFLLS 313
+ S CLQ + K RP LL
Sbjct: 235 FI---SACLQKDPKKRPSAAELLQ 255
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 51.8 bits (124), Expect = 2e-07
Identities = 60/262 (22%), Positives = 114/262 (43%), Gaps = 19/262 (7%)
Query: 63 SEL-IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLV 121
SEL + E G VV+ G+ + VAIK + F+ EA + + H +LV
Sbjct: 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAI-NEGAMSEEDFIEEAKVMMKLSHPKLV 62
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNR 181
L G C + +V ++M N L +L + L +M + + + + +++ +N
Sbjct: 63 QLYGVCTQQKPLYIVTEFMENGCLLNYL-RQRQGKLSKDMLLSMCQDVCEGMEYL-ERNS 120
Query: 182 KLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA-----YTPPEFLRTGRVIP 236
++ DL A L G ++S FG+ + D + S++ A ++PPE +
Sbjct: 121 FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSS 180
Query: 237 ESVIYSYGTVLLDLLSGKHIP--PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV-EL 293
+S ++S+G ++ ++ + +P +V+ M S Y + A+ V E+
Sbjct: 181 KSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVE-------MISRGFRLYRPKLASMTVYEV 233
Query: 294 ASKCLQYEAKDRPDVKFLLSAV 315
C + + RP LL A+
Sbjct: 234 MYSCWHEKPEGRPTFAELLRAI 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 2e-07
Identities = 46/187 (24%), Positives = 89/187 (47%), Gaps = 14/187 (7%)
Query: 78 VYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
VY+GR + +VA+K + P + E + + ++H+ +V L ++ +L
Sbjct: 16 VYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLML 75
Query: 136 VAQYMPNDTLSKHL-FHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194
V +YM D L K++ H + L Y + + + C+ +NR L+ DL +L
Sbjct: 76 VFEYMDKD-LKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH-ENRVLHRDLKPQNLLI 133
Query: 195 DEDGDPRLSSFGLMKNSRDGKSYST------NLAYTPPEFLRTGRVIPESV-IYSYGTVL 247
++ G+ +L+ FGL + G +T L Y P+ L R S+ I+S G ++
Sbjct: 134 NKRGELKLADFGLARAF--GIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIM 191
Query: 248 LDLLSGK 254
++++G+
Sbjct: 192 AEMITGR 198
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 2e-07
Identities = 47/187 (25%), Positives = 91/187 (48%), Gaps = 14/187 (7%)
Query: 78 VYRGRLK----NNRLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
V+RG LK VAIK Q F++EA+ +G H ++ L G +
Sbjct: 21 VFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKP 80
Query: 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRV 192
+++ +YM N L K+L D + +++ V + IA + + + N ++ DL A +
Sbjct: 81 AMIITEYMENGALDKYLRDHDGEFSSYQL-VGMLRGIAAGMKYLSDMNY-VHRDLAARNI 138
Query: 193 LFDEDGDPRLSSFGLMKNSRDGK--SYSTN-----LAYTPPEFLRTGRVIPESVIYSYGT 245
L + + + ++S FGL + D +Y+T+ + +T PE + + S ++S+G
Sbjct: 139 LVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGI 198
Query: 246 VLLDLLS 252
V+ +++S
Sbjct: 199 VMWEVMS 205
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 2e-07
Identities = 51/239 (21%), Positives = 96/239 (40%), Gaps = 19/239 (7%)
Query: 77 VVYRGRLKNNRLVAIKR--FSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134
+YR R +++ LV K +R S + + E L ++H ++ + + L
Sbjct: 17 TLYR-RTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLL 75
Query: 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194
+ +Y TL + Q EM + + I A+ + + L+ D+ +
Sbjct: 76 IEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG-ILHRDIKTLNIFL 134
Query: 195 DEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSYGTVLLDL 250
+ G +L FG+ K S + + TP PE + + +S I++ G VL +L
Sbjct: 135 TKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYEL 194
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANED---ATQLVELASKCLQYEAKDRP 306
L+ K N L L+ ++G Y +++L+ L LQ + + RP
Sbjct: 195 LTLKR--------TFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRP 245
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 3e-07
Identities = 53/259 (20%), Positives = 94/259 (36%), Gaps = 47/259 (18%)
Query: 82 RLKNNRLVAIKR--FSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIG-------------- 125
R + +++ K + + + Q V+E L ++H +V
Sbjct: 21 RKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80
Query: 126 -CCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHC----NSQN 180
C GD L+ + +++ + E R+ + AL C + N
Sbjct: 81 EYCEGGDLAQLIQKCKK-----------ERKYIEEEFIWRILTQLLLALYECHNRSDPGN 129
Query: 181 RKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIP 236
L+ DL + D + + +L FGL K S++ TP PE L
Sbjct: 130 TVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDE 189
Query: 237 ESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA---TQLVEL 293
+S I+S G ++ +L + PP A +N L L EG++ ++L E+
Sbjct: 190 KSDIWSLGCLIYELCALS--PPFTA------RNQLQLASKIKEGKFRRIPYRYSSELNEV 241
Query: 294 ASKCLQYEAKDRPDVKFLL 312
L + RP + LL
Sbjct: 242 IKSMLNVDPDKRPSTEELL 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 3e-07
Identities = 54/256 (21%), Positives = 103/256 (40%), Gaps = 37/256 (14%)
Query: 78 VYRGRLKNNRL----VAIK--RFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD 131
V G+L + VA+K + ++ + +F++EAA + + H ++ LIG C E
Sbjct: 15 VMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEAS 74
Query: 132 ER------LLVAQYMPNDTLSKHLFH--WDKQP--LPWEMRVRVAYYIAQALDHCNSQNR 181
+++ +M + L L + P LP + ++ IA +++ +++N
Sbjct: 75 SLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNF 134
Query: 182 KLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPP------EFLRTGRVI 235
++ DL A + ED ++ FGL K G Y P E L
Sbjct: 135 -IHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYT 193
Query: 236 PESVIYSYGTVLLDLLSGKHIP-----PSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290
+S ++++G + ++ + P D +R N L + L+ Y
Sbjct: 194 SKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPEDCLDELY-------- 245
Query: 291 VELASKCLQYEAKDRP 306
+L C + + KDRP
Sbjct: 246 -DLMYSCWRADPKDRP 260
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 5e-07
Identities = 58/262 (22%), Positives = 103/262 (39%), Gaps = 31/262 (11%)
Query: 78 VYRGRLKNN------RLVAIKRFSRQSWPDPHQ---FVTEAAGLGNVRHKRLVNLIGCCA 128
V+ + K LV +K Q D + F E + HK +V L+G C
Sbjct: 21 VFLAKAKGIEEEGGETLVLVKAL--QKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCR 78
Query: 129 EGDERLLVAQYMPNDTLSKHLF-------HWDKQPLPWEMRVRVAYYIAQALDHCNSQNR 181
E + ++ +Y L + L PL + +V + IA +DH S R
Sbjct: 79 EAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHL-SNAR 137
Query: 182 KLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN-----LAYTPPEFLRTGRVIP 236
++ DL A L + ++S L K+ + + Y L + PE ++
Sbjct: 138 FVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFST 197
Query: 237 ESVIYSYGTVLLDLLSGKHIPPSHALD--VIRGKNLLLLMDSSLEGQYANEDATQLVELA 294
+S ++S+G ++ ++ + +P D V+ L LE ++L +L
Sbjct: 198 KSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNR-----LQAGKLELPVPEGCPSRLYKLM 252
Query: 295 SKCLQYEAKDRPDVKFLLSAVA 316
++C KDRP L+SA+
Sbjct: 253 TRCWAVNPKDRPSFSELVSALG 274
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 6e-07
Identities = 67/287 (23%), Positives = 114/287 (39%), Gaps = 46/287 (16%)
Query: 66 IVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPH---QFVTEAAGLGNVRHKRLV 121
++ G+ A VV + R K +VAIK+F ++S D + E L +RH+ +V
Sbjct: 5 VLGVVGEGAYGVVLKCRNKATGEIVAIKKF-KESEDDEDVKKTALREVKVLRQLRHENIV 63
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQP--LPWEMRVRVAYYIAQALDHCNSQ 179
NL LV +Y+ TL + L + P LP + + + QA+ +C+S
Sbjct: 64 NLKEAFRRKGRLYLVFEYVER-TLLELL---EASPGGLPPDAVRSYIWQLLQAIAYCHSH 119
Query: 180 NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS--YSTNLA---YTPPEFLRTGRV 234
N ++ D+ +L E G +L FG + R + + +A Y PE L G
Sbjct: 120 N-IIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELL-VGDT 177
Query: 235 I--PESVIYSYGTVLLDLLSGK-------------HI-------PPSHALDVIRGKNLL- 271
+++ G ++ +LL G+ I PPSH
Sbjct: 178 NYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAG 237
Query: 272 -----LLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLS 313
SLE +Y + ++ ++ CL+ + K+R LL
Sbjct: 238 VAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 7e-07
Identities = 50/226 (22%), Positives = 98/226 (43%), Gaps = 19/226 (8%)
Query: 104 QFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL--FHWDKQ------ 155
+F+ EA+ + +V L+G ++G L++ + M L +L + +
Sbjct: 55 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQA 114
Query: 156 PLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN----- 210
P + +++A IA + + N+ N+ ++ DL A + ED ++ FG+ ++
Sbjct: 115 PPSLKKMIQMAGEIADGMAYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 173
Query: 211 -SRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKN 269
R G + + PE L+ G S ++S+G VL ++ + P + +
Sbjct: 174 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GMSNEQV 230
Query: 270 LLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAV 315
L +M+ L + N L EL C QY K RP ++S++
Sbjct: 231 LRFVMEGGLLDKPDN-CPDMLFELMRMCWQYNPKMRPSFLEIISSI 275
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 9e-07
Identities = 39/157 (24%), Positives = 76/157 (48%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL---------FHWDKQPLPWEM----- 161
+HK ++NL+G C + ++ +Y L ++L + +D LP E
Sbjct: 76 KHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKD 135
Query: 162 RVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSY--ST 219
V AY +A+ +++ SQ + ++ DL A VL ED +++ FGL ++ + Y +T
Sbjct: 136 LVSCAYQVARGMEYLASQ-KCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTT 194
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G +L ++ +
Sbjct: 195 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 231
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 1e-06
Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 22/215 (10%)
Query: 66 IVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLI 124
I+ E GD A VY+ + K A K +S + F+ E L +H +V L
Sbjct: 9 IIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLY 68
Query: 125 GCCAEGDERLLVAQYMPN---DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNR 181
++ ++ ++ D++ L +P ++R V + +AL+ +S ++
Sbjct: 69 EAYFYENKLWILIEFCDGGALDSIMLELERGLTEP---QIRY-VCRQMLEALNFLHS-HK 123
Query: 182 KLYHDLNAYRVLFDEDGDPRLSSFGL-MKNSRDGKSYSTNLAYTP----PEFL--RTGRV 234
++ DL A +L DGD +L+ FG+ KN + T + TP PE + T +
Sbjct: 124 VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIG-TPYWMAPEVVACETFKD 182
Query: 235 IP---ESVIYSYGTVLLDLLSGKHIPPSHALDVIR 266
P ++ I+S G L++L + PP H L+ +R
Sbjct: 183 NPYDYKADIWSLGITLIELAQME--PPHHELNPMR 215
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 49.7 bits (118), Expect = 1e-06
Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 16/151 (10%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP--- 225
I + LD+ +S+ +K++ D+ A VL E G+ +L+ FG+ D + TP
Sbjct: 110 ILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWM 168
Query: 226 -PEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDS---SLEGQ 281
PE ++ ++ I+S G ++L G+ PP L + K L L+ + +LEG
Sbjct: 169 APEVIKQSAYDSKADIWSLGITAIELAKGE--PPHSELHPM--KVLFLIPKNNPPTLEGN 224
Query: 282 YANEDATQLVELASKCLQYEAKDRPDVKFLL 312
Y+ L E CL E RP K LL
Sbjct: 225 YSKP----LKEFVEACLNKEPSFRPTAKELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 49.3 bits (117), Expect = 2e-06
Identities = 55/247 (22%), Positives = 105/247 (42%), Gaps = 12/247 (4%)
Query: 71 GDKAPNVVYRG-RLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE 129
G A VY + + VAIK+ + Q P + E + ++ +VN +
Sbjct: 28 GQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 87
Query: 130 GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNA 189
GDE +V +Y+ +L+ + + + V QALD +S N+ ++ D+ +
Sbjct: 88 GDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALDFLHS-NQVIHRDIKS 143
Query: 190 YRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSYGT 245
+L DG +L+ FG +S + + TP PE + P+ I+S G
Sbjct: 144 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 203
Query: 246 VLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDR 305
+ ++++ G+ PP + +R L+ + + E Q + + ++CL+ + R
Sbjct: 204 MAIEMVEGE--PPYLNENPLRAL-YLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRR 260
Query: 306 PDVKFLL 312
K LL
Sbjct: 261 GSAKELL 267
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 2e-06
Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 16/189 (8%)
Query: 78 VYRGRLK----NNRLVAIKRF-SRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
V RGRLK VAIK S + F++EA+ +G H +++L G +
Sbjct: 20 VCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRP 79
Query: 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRV 192
+++ ++M N L L D Q ++ V + IA + + + N ++ DL A +
Sbjct: 80 VMIITEFMENGALDSFLRQNDGQFTVIQL-VGMLRGIAAGMKYLSEMNY-VHRDLAARNI 137
Query: 193 LFDEDGDPRLSSFGLMKNSRDGKS---YSTNLA------YTPPEFLRTGRVIPESVIYSY 243
L + + ++S FGL + D S Y+++L +T PE + + S ++SY
Sbjct: 138 LVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSY 197
Query: 244 GTVLLDLLS 252
G V+ +++S
Sbjct: 198 GIVMWEVMS 206
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 48.3 bits (116), Expect = 3e-06
Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 33/213 (15%)
Query: 107 TEAAGLGNVRHKRLVNLIGCCAEGDERL-LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV 165
TE L + H +V L + +E+L LV +Y P L HL + R
Sbjct: 42 TERNILSRINHPFIVKLH-YAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEE-----RA 95
Query: 166 AYYIAQ---ALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA 222
+Y A+ AL++ +S +Y DL +L D DG +L+ FGL K S +
Sbjct: 96 RFYAAEIVLALEYLHSLG-IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFC 154
Query: 223 YTP----PEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSS 277
TP PE L G+ ++V +S G +L ++L+GK PP ++ + +
Sbjct: 155 GTPEYLAPEVLL-GKGYGKAVDWWSLGVLLYEMLTGK--PP------FYAEDRKEIYEKI 205
Query: 278 LEGQ-----YANEDATQLVELASKCLQYEAKDR 305
L+ + + +A +L S LQ + R
Sbjct: 206 LKDPLRFPEFLSPEA---RDLISGLLQKDPTKR 235
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 48.6 bits (115), Expect = 3e-06
Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 11/228 (4%)
Query: 89 VAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKH 148
VAIK+ + Q P + E + +++ +VN + GDE +V +Y+ +L+
Sbjct: 47 VAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDV 106
Query: 149 LFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLM 208
+ + + V QAL+ ++ N+ ++ D+ + VL DG +L+ FG
Sbjct: 107 V---TETCMDEAQIAAVCRECLQALEFLHA-NQVIHRDIKSDNVLLGMDGSVKLTDFGFC 162
Query: 209 KNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDV 264
+S + + TP PE + P+ I+S G + ++++ G+ PP +
Sbjct: 163 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE--PPYLNENP 220
Query: 265 IRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLL 312
+R L+ + + E Q + + + ++CL+ + + R K LL
Sbjct: 221 LRAL-YLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELL 267
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 48.3 bits (116), Expect = 3e-06
Identities = 59/221 (26%), Positives = 89/221 (40%), Gaps = 54/221 (24%)
Query: 78 VYRGR-LKNNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER- 133
VY+ R K LVA+K+ ++ + P + E L +RH +V L +
Sbjct: 15 VYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGS 74
Query: 134 -LLVAQYMPND------------TLS--KHLFHWDKQPLPWEMRVRVAYYIAQALDHCNS 178
+V +YM +D T S K KQ + + L + +S
Sbjct: 75 IYMVFEYMDHDLTGLLDSPEVKFTESQIKCYM---KQ-------------LLEGLQYLHS 118
Query: 179 QNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK--NSRDGKSYSTN----LAYTPPEFL--- 229
N L+ D+ +L + DG +L+ FGL + R+ Y TN L Y PPE L
Sbjct: 119 -NGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADY-TNRVITLWYRPPELLLGA 176
Query: 230 -RTGRVIPESVIYSYGTVLLDLLSGKHIPP----SHALDVI 265
R G PE ++S G +L +L GK I L+ I
Sbjct: 177 TRYG---PEVDMWSVGCILAELFLGKPIFQGSTELEQLEKI 214
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 3e-06
Identities = 49/246 (19%), Positives = 107/246 (43%), Gaps = 17/246 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G N+ VA+K + F+ EA + ++H +LV L + + ++
Sbjct: 22 VWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM +L L + + + + IA+ + + +N ++ DL A VL E
Sbjct: 81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY-IHRDLRAANVLVSES 139
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R+G + + +T PE + G +S ++S+G +L ++
Sbjct: 140 LMCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGSFTIKSDVWSFGILLYEI 197
Query: 251 LSGKHIP-PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVK 309
++ IP P + +++ + +L ++ C + +A++RP
Sbjct: 198 VTYGKIPYPGMS-----NSDVMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFD 252
Query: 310 FLLSAV 315
+L S +
Sbjct: 253 YLQSVL 258
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 4e-06
Identities = 56/252 (22%), Positives = 112/252 (44%), Gaps = 19/252 (7%)
Query: 71 GDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE 129
G+ A VY+ + + VAIK+ + + + E + + +H +V+
Sbjct: 28 GEGASGEVYKATDRATGKEVAIKKMRLRK-QNKELIINEILIMKDCKHPNIVDYYDSYLV 86
Query: 130 GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNA 189
GDE +V +YM +L+ + + + V + Q L++ +SQN ++ D+ +
Sbjct: 87 GDELWVVMEYMDGGSLTD-IITQNFVRMNEPQIAYVCREVLQGLEYLHSQNV-IHRDIKS 144
Query: 190 YRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSYGT 245
+L +DG +L+ FG KS ++ TP PE ++ P+ I+S G
Sbjct: 145 DNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGI 204
Query: 246 VLLDLLSGK--HI--PPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYE 301
+ +++ G+ ++ PP AL +I K + L + + + + + +KCL +
Sbjct: 205 MCIEMAEGEPPYLREPPLRALFLITTKGIPPL-------KNPEKWSPEFKDFLNKCLVKD 257
Query: 302 AKDRPDVKFLLS 313
+ RP + LL
Sbjct: 258 PEKRPSAEELLQ 269
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 48.0 bits (114), Expect = 5e-06
Identities = 41/176 (23%), Positives = 80/176 (45%), Gaps = 10/176 (5%)
Query: 84 KNNRLVAIKRFSRQSWPDPHQ--FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141
K VAI R D + F+ EA LG H +V L G G+ ++V +YM
Sbjct: 31 KRELPVAIHTL-RAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMS 89
Query: 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201
N L L + Q + ++ + + +A + + S+ ++ L A++VL + D +
Sbjct: 90 NGALDSFLRKHEGQLVAGQL-MGMLPGLASGMKYL-SEMGYVHKGLAAHKVLVNSDLVCK 147
Query: 202 LSSFGLMKNSRDGKSYSTN-----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
+S F ++ + Y+T + + PE ++ S ++S+G V+ +++S
Sbjct: 148 ISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMS 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 6e-06
Identities = 59/260 (22%), Positives = 96/260 (36%), Gaps = 25/260 (9%)
Query: 71 GDKAPNVVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVT-EAAGLGNVRHKRLVNLIGCCA 128
G A VVY L NN VAIKR + + E + H +V
Sbjct: 10 GVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFV 69
Query: 129 EGDERLLVAQYMPNDTLS---KHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH 185
GDE LV Y+ +L K + + V + + L++ +S N +++
Sbjct: 70 VGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEA--IIATVLKEVLKGLEYLHS-NGQIHR 126
Query: 186 DLNAYRVLFDEDGDPRLSSFG----LMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPE 237
D+ A +L EDG +++ FG L + TP PE +
Sbjct: 127 DIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDF 186
Query: 238 SV-IYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQ----LVE 292
I+S+G ++L +G P + K L+L + + D + +
Sbjct: 187 KADIWSFGITAIELATGA--APYSKYPPM--KVLMLTLQNDPPSLETGADYKKYSKSFRK 242
Query: 293 LASKCLQYEAKDRPDVKFLL 312
+ S CLQ + RP + LL
Sbjct: 243 MISLCLQKDPSKRPTAEELL 262
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 6e-06
Identities = 34/157 (21%), Positives = 76/157 (48%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL---------FHWD-----KQPLPWEM 161
+HK ++NL+G C + ++ +Y L ++L + +D + + ++
Sbjct: 79 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKD 138
Query: 162 RVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK--NSRDGKSYST 219
V Y +A+ +++ SQ + ++ DL A VL E+ +++ FGL + N+ D +T
Sbjct: 139 LVSCTYQVARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTT 197
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G ++ ++ +
Sbjct: 198 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 234
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 6e-06
Identities = 48/158 (30%), Positives = 67/158 (42%), Gaps = 11/158 (6%)
Query: 112 LGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV-AYYIA 170
L NV+H LV L D+ V Y+ L FH ++ E R R A IA
Sbjct: 50 LKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGEL---FFHLQRERSFPEPRARFYAAEIA 106
Query: 171 QALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----P 226
AL + +S N +Y DL +L D G L+ FGL K + ++ TP P
Sbjct: 107 SALGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAP 165
Query: 227 EFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDV 264
E LR + G VL ++L G +PP ++ D
Sbjct: 166 EVLRKQPYDRTVDWWCLGAVLYEMLYG--LPPFYSRDT 201
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 7e-06
Identities = 51/250 (20%), Positives = 97/250 (38%), Gaps = 30/250 (12%)
Query: 78 VYRGRLKNNR--LVAIKRF----SRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD 131
+YRGR + VA+K S Q D F+ EA + H+ +V LIG E
Sbjct: 26 LYRGRDGDAVELQVAVKTLPESCSEQDESD---FLMEALIMSKFNHQNIVRLIGVSFERL 82
Query: 132 ERLLVAQYMPNDTLSKHLFH---WDKQPLPWEMR--VRVAYYIAQALDHCNSQNRKLYHD 186
R ++ + M L L ++P M+ + A +A+ +N ++ D
Sbjct: 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGC-KYLEENHFIHRD 141
Query: 187 LNAYRVLFDEDGDPR---LSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPE 237
+ A L G R ++ FG+ ++ Y + + PPE G +
Sbjct: 142 IAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSK 201
Query: 238 SVIYSYGTVLLDLLSGKHIP-PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296
+ ++S+G +L ++ S ++P P + ++ + + + +
Sbjct: 202 TDVWSFGVLLWEIFSLGYMPYPGR-----TNQEVMEFVTGGGRLDPPKGCPGPVYRIMTD 256
Query: 297 CLQYEAKDRP 306
C Q+ +DRP
Sbjct: 257 CWQHTPEDRP 266
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 7e-06
Identities = 50/227 (22%), Positives = 87/227 (38%), Gaps = 15/227 (6%)
Query: 89 VAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSK 147
VA+K D F+ EAA + ++ H+ L+ L G ++V + P +L
Sbjct: 26 VAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLD 84
Query: 148 HLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGL 207
L A IA + + S+ R ++ DL A +L D ++ FGL
Sbjct: 85 RLRKDALGHFLISTLCDYAVQIANGMRYLESK-RFIHRDLAARNILLASDDKVKIGDFGL 143
Query: 208 MKNSRDGKSYSTN-------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSH 260
M+ + + A+ PE LRT S ++ +G L ++ + P +
Sbjct: 144 MRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAG 203
Query: 261 ALDVIRGKNLLLLMDSSLEGQYANEDATQ-LVELASKCLQYEAKDRP 306
+ G +L +D E E Q + + +C + DRP
Sbjct: 204 ----LSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRP 246
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 9e-06
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 16/129 (12%)
Query: 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQNRKLYHDLNAYR 191
L+ Y+ L HL+ + E VRV YIA+ ALDH + Q +Y D+
Sbjct: 82 LILDYVNGGELFTHLYQREHFT---ESEVRV--YIAEIVLALDHLH-QLGIIYRDIKLEN 135
Query: 192 VLFDEDGDPRLSSFGLMK-----NSRDGKSYSTNLAYTPPEFLRTGRVIPESVI--YSYG 244
+L D +G L+ FGL K S+ + Y PE +R G + + +S G
Sbjct: 136 ILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLG 195
Query: 245 TVLLDLLSG 253
+ +LL+G
Sbjct: 196 VLTFELLTG 204
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 1e-05
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 18/159 (11%)
Query: 106 VTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV 165
+TE L N RH L L D V +Y L FH ++ + E R R
Sbjct: 43 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRAR- 98
Query: 166 AYY---IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS-RDG---KSYS 218
+Y I ALD+ +S+ +Y DL ++ D+DG +++ FGL K +DG K++
Sbjct: 99 -FYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC 157
Query: 219 TNLAYTPPEFLRT---GRVIPESVIYSYGTVLLDLLSGK 254
Y PE L GR + + G V+ +++ G+
Sbjct: 158 GTPEYLAPEVLEDNDYGRAVD---WWGLGVVMYEMMCGR 193
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 1e-05
Identities = 64/259 (24%), Positives = 102/259 (39%), Gaps = 45/259 (17%)
Query: 78 VYRG-RLKNNRLVAIKRFS-----RQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD 131
VY G L + A+K S + Q E A L ++H +V +G E D
Sbjct: 16 VYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREED 75
Query: 132 ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALD-----HCNSQNRKLYH- 185
+ + +P +L+K L + P P + Y Q L H +R H
Sbjct: 76 NLYIFLELVPGGSLAKLLKKYGSFPEP-----VIRLYTRQILLGLEYLH----DRNTVHR 126
Query: 186 DLNAYRVLFDEDGDPRLSSFGLMKNS---RDGKSYSTNLAYTPPEFL-RTGRVIPESVIY 241
D+ +L D +G +L+ FG+ K KS+ + + PE + + G + I+
Sbjct: 127 DIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIW 186
Query: 242 SYGTVLLDLLSGKHIPPSHALD-------VIRGKNLLLLMDS-SLEGQYANEDATQLVEL 293
S G +L++ +GK PP L+ + R K L + D S E + +
Sbjct: 187 SLGCTVLEMATGK--PPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAK----------DF 234
Query: 294 ASKCLQYEAKDRPDVKFLL 312
KCLQ + RP LL
Sbjct: 235 ILKCLQRDPSLRPTAAELL 253
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 1e-05
Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 30/189 (15%)
Query: 88 LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSK 147
LVA+K S F EA L ++H+ +V G C EG L+V +YM + L++
Sbjct: 37 LVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNR 96
Query: 148 ---------HLFHWDKQ----PLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194
+ + L + +A IA + + S + ++ DL L
Sbjct: 97 FLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHF-VHRDLATRNCLV 155
Query: 195 DEDGDPRLSSFGLMKNSRDGKSYSTN-----------LAYTPPEFLRTGRVIPESVIYSY 243
+ ++ FG+ SRD YST+ + + PPE + + ES I+S+
Sbjct: 156 GQGLVVKIGDFGM---SRD--IYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSF 210
Query: 244 GTVLLDLLS 252
G VL ++ +
Sbjct: 211 GVVLWEIFT 219
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 46.6 bits (110), Expect = 1e-05
Identities = 53/247 (21%), Positives = 106/247 (42%), Gaps = 12/247 (4%)
Query: 71 GDKAPNVVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE 129
G A VY + + VAI++ + Q P + E + ++ +VN +
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 130 GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNA 189
GDE +V +Y+ +L+ + + + V QAL+ +S N+ ++ D+ +
Sbjct: 89 GDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHS-NQVIHRDIKS 144
Query: 190 YRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSYGT 245
+L DG +L+ FG +S + + TP PE + P+ I+S G
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 246 VLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDR 305
+ ++++ G+ PP + +R L+ + + E Q + + + ++CL + + R
Sbjct: 205 MAIEMIEGE--PPYLNENPLRAL-YLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR 261
Query: 306 PDVKFLL 312
K LL
Sbjct: 262 GSAKELL 268
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 5/134 (3%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
VVY+ R +VA+K+ ++ + P + E + L + H +V L+ ++
Sbjct: 14 VVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKL 73
Query: 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVL 193
LV +++ D L K++ L + Y + Q + +C+S +R L+ DL +L
Sbjct: 74 YLVFEFLDLD-LKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHS-HRVLHRDLKPQNLL 131
Query: 194 FDEDGDPRLSSFGL 207
D +G +L+ FGL
Sbjct: 132 IDREGALKLADFGL 145
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 46.2 bits (109), Expect = 2e-05
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP--- 225
I + LD+ +S+ +K++ D+ A VL E GD +L+ FG+ D + TP
Sbjct: 110 ILKGLDYLHSE-KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWM 168
Query: 226 -PEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYAN 284
PE ++ ++ I+S G ++L G+ PP+ + +R +L L+ +
Sbjct: 169 APEVIQQSAYDSKADIWSLGITAIELAKGE--PPNSDMHPMR---VLFLIPKNNPPTLTG 223
Query: 285 EDATQLVELASKCLQYEAKDRPDVKFLL 312
E + E CL + RP K LL
Sbjct: 224 EFSKPFKEFIDACLNKDPSFRPTAKELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 46.0 bits (110), Expect = 2e-05
Identities = 59/272 (21%), Positives = 103/272 (37%), Gaps = 58/272 (21%)
Query: 78 VYRGRLK-NNRLVAIKRFSRQ--SWPDPHQFVT-EAAGLGNV-RHKRLVNLIGCCAEGDE 132
V + K N+ AIK ++ ++V E L + H ++ L + +E
Sbjct: 17 VVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLY-YTFQDEE 75
Query: 133 RL-LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQNRKLYH-DL 187
L V +Y PN L +++ + +Y A+ AL++ +S+ + H DL
Sbjct: 76 NLYFVLEYAPNGELLQYIRKYGSLDEKC-----TRFYAAEILLALEYLHSKG--IIHRDL 128
Query: 188 NAYRVLFDEDGDPRLSSFG--------LMKNSRDGKSYSTNLA----------------Y 223
+L D+D +++ FG S G + + + Y
Sbjct: 129 KPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEY 188
Query: 224 TPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA 283
PE L S +++ G ++ +L+GK PP RG N L L+ +Y+
Sbjct: 189 VSPELLNEKPAGKSSDLWALGCIIYQMLTGK--PP------FRGSNEYLTFQKILKLEYS 240
Query: 284 -----NEDATQLVELASKCLQYEAKDRPDVKF 310
DA L+E K L + +DR V
Sbjct: 241 FPPNFPPDAKDLIE---KLLVLDPQDRLGVNE 269
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 2e-05
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 10/126 (7%)
Query: 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQNRKLYHDLNAYR 191
LV M L H+++ + P R +Y AQ L+H + Q R +Y DL
Sbjct: 70 LVMTLMNGGDLKYHIYNVGEPGFP---EARAIFYAAQIICGLEHLH-QRRIVYRDLKPEN 125
Query: 192 VLFDEDGDPRLSSFGL---MKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLL 248
VL D+ G+ R+S GL +K + K + Y PE L+ ++ G L
Sbjct: 126 VLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLY 185
Query: 249 DLLSGK 254
++++G+
Sbjct: 186 EMIAGR 191
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 3e-05
Identities = 45/158 (28%), Positives = 69/158 (43%), Gaps = 11/158 (6%)
Query: 112 LGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV-AYYIA 170
L N++H LV L ++ V Y+ L FH ++ E R R A +A
Sbjct: 50 LKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGEL---FFHLQRERCFLEPRARFYAAEVA 106
Query: 171 QALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----P 226
A+ + +S N +Y DL +L D G L+ FGL K + + ++ TP P
Sbjct: 107 SAIGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAP 165
Query: 227 EFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDV 264
E LR + G VL ++L G +PP ++ DV
Sbjct: 166 EVLRKEPYDRTVDWWCLGAVLYEMLYG--LPPFYSRDV 201
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 3e-05
Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 22/256 (8%)
Query: 69 ESGDKAPNVVYRGR-LKNNRLVAIKRFS---RQSWPDPHQFVTEAAGLGNVRHKRLVNLI 124
E G + VY R ++N+ +VAIK+ S +QS + E L +RH +
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 125 GCCAEGDERLLVAQYM---PNDTLSKHLFHWDKQPLPWEMRVRVAYYIA-QALDHCNSQN 180
GC LV +Y +D L H K+PL E+ + + A Q L + +S N
Sbjct: 82 GCYLREHTAWLVMEYCLGSASDLLEVH-----KKPLQ-EVEIAAVTHGALQGLAYLHSHN 135
Query: 181 RKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEF---LRTGRVIPE 237
++ D+ A +L E G +L FG + + PE + G+ +
Sbjct: 136 -MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGK 194
Query: 238 SVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKC 297
++S G ++L + PP ++ + + +S + + C
Sbjct: 195 VDVWSLGITCIEL--AERKPPLFNMNAMSALYHIAQNESPA--LQSGHWSEYFRNFVDSC 250
Query: 298 LQYEAKDRPDVKFLLS 313
LQ +DRP + LL
Sbjct: 251 LQKIPQDRPTSEVLLK 266
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 3e-05
Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 10/200 (5%)
Query: 67 VSESGDKAPNVVYRGR-LKNNRLVAIK--RFSRQSWPDPHQFVTEAAGLGNVRHKRLVNL 123
V + G+ VVY+ R +VA+K R ++ P + E + L + H +V L
Sbjct: 5 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 64
Query: 124 IGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKL 183
+ ++ LV +++ D L K + +P + + + Q L C+S +R L
Sbjct: 65 LDVIHTENKLYLVFEFLHQD-LKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHS-HRVL 122
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMKN-SRDGKSYS---TNLAYTPPEFLRTGRVIPESV 239
+ DL +L + +G +L+ FGL + ++Y+ L Y PE L + +V
Sbjct: 123 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 182
Query: 240 -IYSYGTVLLDLLSGKHIPP 258
I+S G + ++++ + + P
Sbjct: 183 DIWSLGCIFAEMVTRRALFP 202
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 3e-05
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Query: 77 VVYRGRLKN-NRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
VVY+GR K ++VA+K+ +S + P + E + L ++H +V L +
Sbjct: 15 VVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRL 74
Query: 134 LLVAQYMPNDTLSKHLFHWDK-QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRV 192
L+ +++ D L K+L K Q + E+ Y I Q + C+S+ R L+ DL +
Sbjct: 75 YLIFEFLSMD-LKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR-RVLHRDLKPQNL 132
Query: 193 LFDEDGDPRLSSFGL 207
L D G +L+ FGL
Sbjct: 133 LIDNKGVIKLADFGL 147
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 3e-05
Identities = 42/188 (22%), Positives = 82/188 (43%), Gaps = 12/188 (6%)
Query: 87 RLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLS 146
+LVA+K+ + E + + +H+ +V + GDE +V +++ L+
Sbjct: 46 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105
Query: 147 KHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFG 206
+ H + E V + +AL ++Q ++ D+ + +L DG +LS FG
Sbjct: 106 DIVTH---TRMNEEQIAAVCLAVLKALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFG 161
Query: 207 LMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSYGTVLLDLLSGK----HIPP 258
+L TP PE + PE I+S G ++++++ G+ + PP
Sbjct: 162 FCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 221
Query: 259 SHALDVIR 266
A+ +IR
Sbjct: 222 LKAMKMIR 229
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 45.5 bits (107), Expect = 3e-05
Identities = 62/265 (23%), Positives = 108/265 (40%), Gaps = 20/265 (7%)
Query: 69 ESGDKAPNVVYRGR-LKNNRLVAIKRFS---RQSWPDPHQFVTEAAGLGNVRHKRLVNLI 124
E G + VY R ++ N +VAIK+ S +QS + E L ++H +
Sbjct: 32 EIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYK 91
Query: 125 GCCAEGDERLLVAQYM---PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNR 181
GC LV +Y +D L H K+PL + + Q L + +S N
Sbjct: 92 GCYLREHTAWLVMEYCLGSASDLLEVH-----KKPLQEVEIAAITHGALQGLAYLHSHNM 146
Query: 182 KLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEF---LRTGRVIPES 238
++ D+ A +L E G +L+ FG + S+ + PE + G+ +
Sbjct: 147 -IHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTPYWMAPEVILAMDEGQYDGKV 205
Query: 239 VIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCL 298
++S G ++L K PP ++ + L + + +NE + CL
Sbjct: 206 DVWSLGITCIELAERK--PPLFNMNAMSA--LYHIAQNESPTLQSNEWSDYFRNFVDSCL 261
Query: 299 QYEAKDRPDVKFLLSAVAPLQKQTE 323
Q +DRP + LL + L+++ E
Sbjct: 262 QKIPQDRPTSEELLKHMFVLRERPE 286
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 4e-05
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 165 VAYYIAQ---ALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KSYS- 218
V +Y+A+ ALDH +S +Y DL +L DE+G +L+ FGL K S D K+YS
Sbjct: 100 VKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 158
Query: 219 -TNLAYTPPEFL-RTGRVIPESVIYSYGTVLLDLLSG 253
+ Y PE + R G +S+G ++ ++L+G
Sbjct: 159 CGTVEYMAPEVVNRRGHTQSAD-WWSFGVLMFEMLTG 194
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 4e-05
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 30/216 (13%)
Query: 68 SESGDKAP------NVVYRGR-LKNNRLVAIK----RFSRQSWPDPHQFVTEAAGLGNVR 116
E+G++ +VY R L +AIK R SR P E A ++
Sbjct: 8 DENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQP----LHEEIALHSYLK 63
Query: 117 HKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL-FHWDKQPLPWEMRVRVAYYIAQALDH 175
H+ +V +G +E + + +P +LS L W PL + + +Y Q L+
Sbjct: 64 HRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWG--PLKDNEQT-IIFYTKQILEG 120
Query: 176 CN--SQNRKLYHDLNAYRVLFDE-DGDPRLSSFGLMKN----SRDGKSYSTNLAYTPPEF 228
N+ ++ D+ VL + G ++S FG K + ++++ L Y PE
Sbjct: 121 LKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEV 180
Query: 229 LRTGR--VIPESVIYSYGTVLLDLLSGKHIPPSHAL 262
+ G + I+S G ++++ +GK PP L
Sbjct: 181 IDKGPRGYGAPADIWSLGCTIVEMATGK--PPFIEL 214
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 45.5 bits (107), Expect = 4e-05
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 106 VTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV 165
+TE+ L N RH L +L D V +Y+ L FH ++ + E R R
Sbjct: 43 LTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGEL---FFHLSRERVFSEDRTRF 99
Query: 166 -AYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDGKSYSTN 220
I ALD+ +S + +Y DL ++ D+DG +++ FGL K ++ K++
Sbjct: 100 YGAEIVSALDYLHS-GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGT 158
Query: 221 LAYTPPEFLRT---GRVIPESVIYSYGTVLLDLLSGK 254
Y PE L GR + + G V+ +++ G+
Sbjct: 159 PEYLAPEVLEDNDYGRAVD---WWGLGVVMYEMMCGR 192
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 4e-05
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 67 VSESGDKAPNVVYRGRLKNN-RLVAIKRFSRQSWPDPHQ---FVTEAAGLGNVRHKRLVN 122
+S+ G+ + VV++ R + ++VAIK+F +S DP + E L ++H LVN
Sbjct: 6 LSKIGEGSYGVVFKCRNRETGQIVAIKKFV-ESEDDPVIKKIALREIRMLKQLKHPNLVN 64
Query: 123 LIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQP--LPWEMRVRVAYYIAQALDHCNSQN 180
LI + LV +Y + L++ +K P +P + ++ + QA++ C+ N
Sbjct: 65 LIEVFRRKRKLHLVFEYCDHTVLNE----LEKNPRGVPEHLIKKIIWQTLQAVNFCHKHN 120
Query: 181 RKLYHDLNAYRVLFDEDGDPRLSSFGLMKN-SRDGKSYSTNLA---YTPPEFLRTGRVIP 236
++ D+ +L + G +L FG + + G Y+ +A Y PE L
Sbjct: 121 -CIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYG 179
Query: 237 ESV-IYSYGTVLLDLLSGKHIPP 258
V +++ G V +LL+G+ + P
Sbjct: 180 PPVDVWAIGCVFAELLTGQPLWP 202
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 4e-05
Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 66 IVSESGDKAPNVVYRGRLKNN-RLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLI 124
I+ E GD A VY+ + K L A K +S + ++ E L H +V L+
Sbjct: 16 IIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLL 75
Query: 125 GCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLY 184
G + ++ ++ P + + D+ +++V + + +AL + +S + ++
Sbjct: 76 GAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-ICRQMLEALQYLHSM-KIIH 133
Query: 185 HDLNAYRVLFDEDGDPRLSSFGL----MKNSRDGKSYSTNLAYTPPEFL--RTGRVIP-- 236
DL A VL DGD +L+ FG+ +K + S+ + PE + T + P
Sbjct: 134 RDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYD 193
Query: 237 -ESVIYSYGTVLLDLLSGKHIPPSHALDVIR 266
++ I+S G L+++ + PP H L+ +R
Sbjct: 194 YKADIWSLGITLIEMAQIE--PPHHELNPMR 222
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 45.1 bits (106), Expect = 4e-05
Identities = 45/172 (26%), Positives = 82/172 (47%), Gaps = 12/172 (6%)
Query: 89 VAIKRFSRQSWPDPH-QFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSK 147
VAIK + + P + +F+ EA + ++ H LV L+G C +L V Q MP+ L
Sbjct: 39 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLD 97
Query: 148 HLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYRVLFDEDGDPRLSSFG 206
++ H K + ++ + IA+ + + + R+L H DL A VL +++ FG
Sbjct: 98 YV-HEHKDNIGSQLLLNWCVQIAKGMMYL--EERRLVHRDLAARNVLVKSPNHVKITDFG 154
Query: 207 LMK-NSRDGKSYSTNLAYTPP-----EFLRTGRVIPESVIYSYGTVLLDLLS 252
L + D K Y+ + P E + + +S ++SYG + +L++
Sbjct: 155 LARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 206
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 4e-05
Identities = 63/284 (22%), Positives = 114/284 (40%), Gaps = 48/284 (16%)
Query: 61 FSSELIVSESGDKAPNVVYRGRL-----KNNRLVAIKRF----SRQSWPDPHQFVTEAAG 111
S+ + E G+ A +Y+G L + +LVAIK + Q W + F EA+
Sbjct: 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGE---FQQEASL 60
Query: 112 LGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLF----HWD-----------KQP 156
+ + H +V L+G + ++ +Y+ L + L H D K
Sbjct: 61 MAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSS 120
Query: 157 LPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS 216
L + +A IA +++ +S + ++ DL A +L E ++S GL +
Sbjct: 121 LDHGDFLHIAIQIAAGMEYLSS-HFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADY 179
Query: 217 YSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP-----PSHALDVI 265
Y + + PPE + G+ +S I+S+G VL ++ S P ++++
Sbjct: 180 YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMV 239
Query: 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVK 309
R + LL + Y+ L ++C Q RP K
Sbjct: 240 RKRQLLPCSEDCPPRMYS---------LMTECWQEGPSRRPRFK 274
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 5e-05
Identities = 57/259 (22%), Positives = 97/259 (37%), Gaps = 36/259 (13%)
Query: 78 VYRGRLKNN---RLVAIKRFSRQSWPDPHQ-------FVTEAAGLGNVRHKRLVNLIGCC 127
+Y+G L+ +V + F A+ + + HK LV L G C
Sbjct: 11 IYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVC 70
Query: 128 AEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALD--------HCNSQ 179
DE ++V +Y+ L L H +K + ++ VA +A AL H N
Sbjct: 71 VR-DENIMVEEYVKFGPLDVFL-HREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVC 128
Query: 180 NRKLY---HDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIP 236
+ + + LN V F + DP + L + R + + PE +R G+
Sbjct: 129 GKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVERI-----PWIAPECIRNGQASL 183
Query: 237 ESV--IYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294
+S+GT LL++ S P S + + D + D +L L
Sbjct: 184 TIAADKWSFGTTLLEICSNGEEPLS---TLSSSEKERFYQDQH---RLPMPDCAELANLI 237
Query: 295 SKCLQYEAKDRPDVKFLLS 313
++C Y+ RP + +L
Sbjct: 238 NQCWTYDPTKRPSFRAILR 256
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 6e-05
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 19/159 (11%)
Query: 106 VTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV 165
VTE+ L N RH L L D V +Y L FH ++ + E R R
Sbjct: 43 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERAR- 98
Query: 166 AYY---IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDGKSYS 218
+Y I AL++ +S++ +Y D+ ++ D+DG +++ FGL K + K++
Sbjct: 99 -FYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC 156
Query: 219 TNLAYTPPEFLRT---GRVIPESVIYSYGTVLLDLLSGK 254
Y PE L GR + + G V+ +++ G+
Sbjct: 157 GTPEYLAPEVLEDNDYGRAVD---WWGLGVVMYEMMCGR 192
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323 |
| >gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 8e-05
Identities = 62/251 (24%), Positives = 98/251 (39%), Gaps = 30/251 (11%)
Query: 11 HLASPDKEAPEAKPDLGEGEGEGEGEEGEEEQVPAFKEFVLADLRAATNGFSSELIVSES 70
+ A D EA + DL EGE E E P +VL L N ++ + +
Sbjct: 37 YCADLDPEAYKKCVDLPEGE------EVPESNNPREHMYVLTTL-VGRNPTTAAFVATRG 89
Query: 71 GDKAPNVVYRG-RLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE 129
D VV + L + R A R +E L H +V
Sbjct: 90 SDPKEKVVAKFVMLNDERQAAYAR-------------SELHCLAACDHFGIVKHFDDFKS 136
Query: 130 GDERLLVAQYMPNDTLSKHLFHWDKQPLPW-EMRVRVAYY-IAQALDHCNSQNRKLYHDL 187
D+ LL+ +Y L+K + K+ LP+ E V + +Y I ALD +S+ + ++ DL
Sbjct: 137 DDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR-KMMHRDL 195
Query: 188 NAYRVLFDEDGDPRLSSFGLMKNSRD------GKSYSTNLAYTPPEFLRTGRVIPESVIY 241
+ + G +L FG K D S+ Y PE R ++ ++
Sbjct: 196 KSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMW 255
Query: 242 SYGTVLLDLLS 252
S G +L +LL+
Sbjct: 256 SLGVILYELLT 266
|
Length = 478 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 8e-05
Identities = 49/256 (19%), Positives = 99/256 (38%), Gaps = 38/256 (14%)
Query: 89 VAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTL-- 145
VA+K + + ++E L V H ++ L G C++ LL+ +Y +L
Sbjct: 33 VAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRS 92
Query: 146 --------------------SKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH 185
S +L + D++ L + A+ I++ + + ++ + ++
Sbjct: 93 FLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYL-AEMKLVHR 151
Query: 186 DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESV 239
DL A VL E ++S FGL ++ + SY + + E L +S
Sbjct: 152 DLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSD 211
Query: 240 IYSYGTVLLDL--LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKC 297
++S+G +L ++ L G P I + L L+ + + + ++ L C
Sbjct: 212 VWSFGVLLWEIVTLGGNPYPG------IAPERLFNLLKTGYRMERPENCSEEMYNLMLTC 265
Query: 298 LQYEAKDRPDVKFLLS 313
+ E RP +
Sbjct: 266 WKQEPDKRPTFADISK 281
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 9e-05
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL---------FHWDKQPLPWEMR---- 162
+HK ++NL+G C + ++ +Y L ++L + ++ +P E
Sbjct: 82 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKD 141
Query: 163 -VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSY--ST 219
V AY +A+ +++ S+ + ++ DL A VL ED +++ FGL ++ Y +T
Sbjct: 142 LVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 200
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G +L ++ +
Sbjct: 201 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 237
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 36/184 (19%)
Query: 89 VAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP------ 141
VAIK ++ P ++ + EA + +V H +V L+G C + L+ Q MP
Sbjct: 39 VAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICL-SSQVQLITQLMPLGCLLD 97
Query: 142 -----NDTL-SKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYRVLF 194
D + S++L +W Q IA+ + + + ++L H DL A VL
Sbjct: 98 YVRNHKDNIGSQYLLNWCVQ-------------IAKGMSYL--EEKRLVHRDLAARNVLV 142
Query: 195 DEDGDPRLSSFGLMKN-SRDGKSYSTNLAYTP-----PEFLRTGRVIPESVIYSYGTVLL 248
+++ FGL K D K Y P E + +S ++SYG +
Sbjct: 143 KTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVW 202
Query: 249 DLLS 252
+L++
Sbjct: 203 ELMT 206
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 1e-04
Identities = 58/255 (22%), Positives = 109/255 (42%), Gaps = 24/255 (9%)
Query: 77 VVYRGRL----KNNRLVAIKRFSR-QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCC--AE 129
VY G L A+K +R + QF+ E + + H +++L+G C +E
Sbjct: 10 CVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE 69
Query: 130 GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLN 188
G L+V YM + L + P ++ + + + A ++K H DL
Sbjct: 70 GSP-LVVLPYMKHGDLRNFIRSETHNPTVKDL---IGFGLQVAKGMEYLASKKFVHRDLA 125
Query: 189 AYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN--------LAYTPPEFLRTGRVIPESVI 240
A + DE +++ FGL ++ D + YS + + + E L+T + +S +
Sbjct: 126 ARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDV 185
Query: 241 YSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQY 300
+S+G +L +L++ + PP +D LL L+ +Y + L E+ C
Sbjct: 186 WSFGVLLWELMT-RGAPPYPDVDSFDITVYLLQGRRLLQPEYCPD---PLYEVMLSCWHP 241
Query: 301 EAKDRPDVKFLLSAV 315
+ + RP L+S +
Sbjct: 242 KPEMRPTFSELVSRI 256
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 78 VYRGRLK-NNRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
VY+GR K +LVA+K + P + EA+ L +++H +V L L
Sbjct: 21 VYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTL 80
Query: 136 VAQYMPNDTLSKHLFHWDKQPLPWEMR-VRV-AYYIAQALDHCNSQNRKLYHDLNAYRVL 193
V +Y+ D L +++ D M VR+ + + + L +C+ + R L+ DL +L
Sbjct: 81 VFEYLDTD-LKQYM---DDCGGGLSMHNVRLFLFQLLRGLAYCHQR-RVLHRDLKPQNLL 135
Query: 194 FDEDGDPRLSSFGLMK-NSRDGKSYS---TNLAYTPPEFL 229
E G+ +L+ FGL + S K+YS L Y PP+ L
Sbjct: 136 ISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVL 175
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 2e-04
Identities = 46/238 (19%), Positives = 91/238 (38%), Gaps = 28/238 (11%)
Query: 89 VAIKRFSRQSWPDPH-QFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSK 147
VA+K + + +F+ EA + N H +V L+G C + + ++ + M L
Sbjct: 29 VAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLS 88
Query: 148 HLFHWDKQPLPWEMRVRVAYYIAQALDHCN-----SQNRKLYHDLNAYRVLFDEDGDPR- 201
+L + + + + + LD Q ++ DL A L E G
Sbjct: 89 YLRDARVERFGPPL-LTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDAD 147
Query: 202 ----LSSFGLMKNSRDGKSYST------NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+ FGL ++ Y + + PE L G+ +S ++S+G ++ ++L
Sbjct: 148 RVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEIL 207
Query: 252 SGKHIP-PSHALDVIRGKNLLLLMDSSLEG--QYANEDATQLVELASKCLQYEAKDRP 306
+ P P+ N +L + G Q ++ +L + C + +RP
Sbjct: 208 TLGQQPYPALN-------NQEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERP 258
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 2e-04
Identities = 36/157 (22%), Positives = 76/157 (48%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL---------FHWD-----KQPLPWEM 161
+HK ++NL+G C + ++ +Y L + L + +D ++ L ++
Sbjct: 76 KHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKD 135
Query: 162 RVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSY--ST 219
V AY +A+ +++ S+ R ++ DL A VL ED +++ FGL + D Y ++
Sbjct: 136 LVSCAYQVARGMEYLESR-RCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTS 194
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G ++ ++ +
Sbjct: 195 NGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFT 231
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 53/236 (22%), Positives = 104/236 (44%), Gaps = 18/236 (7%)
Query: 82 RLKNNRL--VAIKRFSR-QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138
+K+ + VA+K + +F+ EA+ + + H +V LIG C +G+ +LV +
Sbjct: 17 LMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVC-KGEPLMLVME 75
Query: 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG 198
P L K+L ++ +P +A+ +A + + S++ ++ DL A VL
Sbjct: 76 LAPLGPLLKYLK--KRREIPVSDLKELAHQVAMGMAYLESKHF-VHRDLAARNVLLVNRH 132
Query: 199 DPRLSSFGLMKNSRDGKSYSTN-------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
++S FG+ + G Y L + PE + G+ +S ++SYG L +
Sbjct: 133 QAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAF 192
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPD 307
S P ++G ++ +++S E ++ + C +Y +DRP
Sbjct: 193 SYGAKPYGE----MKGAEVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPT 244
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 2e-04
Identities = 46/160 (28%), Positives = 65/160 (40%), Gaps = 15/160 (9%)
Query: 112 LGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ 171
L NV+H LV L ++ V ++ L HL P P R +Y A+
Sbjct: 50 LKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEP-----RARFYAAE 104
Query: 172 ---ALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP--- 225
AL + +S N +Y DL +L D G L+ FGL K +T TP
Sbjct: 105 IASALGYLHSIN-IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYL 163
Query: 226 -PEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDV 264
PE +R + G VL ++L G +PP + DV
Sbjct: 164 APEVIRKQPYDNTVDWWCLGAVLYEMLYG--LPPFYCRDV 201
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 2e-04
Identities = 46/220 (20%), Positives = 99/220 (45%), Gaps = 23/220 (10%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLF--HWDKQPLPWEMR 162
F+ EA + ++H +LV L + + ++ ++M +L L KQPLP
Sbjct: 48 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KL 104
Query: 163 VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK-------NSRDGK 215
+ + IA+ + +N ++ DL A +L +++ FGL + +R+G
Sbjct: 105 IDFSAQIAEGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGA 163
Query: 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP-PSHA-LDVIRGKNLLLL 273
+ + +T PE + G +S ++S+G +L+++++ IP P + +VIR
Sbjct: 164 KFP--IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA------ 215
Query: 274 MDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLS 313
++ +L + +C + ++RP +++ S
Sbjct: 216 LERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 2e-04
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 112 LGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ 171
L V + +V+L D LV M L H++H + V A I
Sbjct: 54 LEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICC 113
Query: 172 ALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---KSYSTNLAYTPPEF 228
L+ + Q R +Y DL +L D+ G R+S GL + +G K + Y PE
Sbjct: 114 GLEDLH-QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEV 172
Query: 229 LRTGRVIPESVIYSYGTVLLDLLSGK 254
++ R ++ G +L ++++G+
Sbjct: 173 VKNERYTFSPDWWALGCLLYEMIAGQ 198
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 2e-04
Identities = 45/155 (29%), Positives = 66/155 (42%), Gaps = 11/155 (7%)
Query: 112 LGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV-AYYIA 170
L NV+H LV L D+ V Y+ L +H ++ E R R A IA
Sbjct: 50 LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL---FYHLQRERCFLEPRARFYAAEIA 106
Query: 171 QALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----P 226
AL + +S N +Y DL +L D G L+ FGL K + + ++ TP P
Sbjct: 107 SALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAP 165
Query: 227 EFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA 261
E L + G VL ++L G +PP ++
Sbjct: 166 EVLHKQPYDRTVDWWCLGAVLYEMLYG--LPPFYS 198
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 2e-04
Identities = 46/212 (21%), Positives = 94/212 (44%), Gaps = 9/212 (4%)
Query: 67 VSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDP--HQFVTEAAGLGNVRHKRLVNLI 124
+SE G VV + + K + L+ ++ +Q + E L +V
Sbjct: 10 ISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 69
Query: 125 GCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLY 184
G E + ++M +L + L + + +P E+ +V+ + + L + +++ ++
Sbjct: 70 GAFYSDGEISICMEHMDGGSLDQVL--KEAKRIPEEILGKVSIAVLRGLAYLREKHQIMH 127
Query: 185 HDLNAYRVLFDEDGDPRLSSFGLMKNSRD--GKSYSTNLAYTPPEFLRTGRVIPESVIYS 242
D+ +L + G+ +L FG+ D S+ +Y PE L+ +S I+S
Sbjct: 128 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 187
Query: 243 YGTVLLDLLSGKH-IPPSHA--LDVIRGKNLL 271
G L++L G++ IPP A L+ I G+ ++
Sbjct: 188 MGLSLVELAIGRYPIPPPDAKELEAIFGRPVV 219
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 2e-04
Identities = 53/213 (24%), Positives = 99/213 (46%), Gaps = 18/213 (8%)
Query: 66 IVSESGDKAPNVVYRGRLKNNR-LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLI 124
I+ E GD A VY+ + K L A K +S + ++ E L + H +V L+
Sbjct: 9 IIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 68
Query: 125 GCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCN--SQNRK 182
+ ++ ++ + + ++ PL E ++RV Q L+ N +N+
Sbjct: 69 DAFYYENNLWILIEFCAGGAVDAVMLELER-PLT-EPQIRVV--CKQTLEALNYLHENKI 124
Query: 183 LYHDLNAYRVLFDEDGDPRLSSFGL-MKNSRDGK---SYSTNLAYTPPEFL--RTGRVIP 236
++ DL A +LF DGD +L+ FG+ KN+R + S+ + PE + T + P
Sbjct: 125 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 184
Query: 237 ---ESVIYSYGTVLLDLLSGKHIPPSHALDVIR 266
++ ++S G L+++ + PP H L+ +R
Sbjct: 185 YDYKADVWSLGITLIEMAQIE--PPHHELNPMR 215
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 3e-04
Identities = 62/264 (23%), Positives = 112/264 (42%), Gaps = 30/264 (11%)
Query: 66 IVSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHK 118
++ E G + +VY G ++ VA+K + S + +F+ EA+ +
Sbjct: 10 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 69
Query: 119 RLVNLIGCCAEGDERLLVAQYMPNDTLSKHL--FHWDKQ-----PLPW--EMRVRVAYYI 169
+V L+G ++G L+V + M + L +L + + P P EM +++A I
Sbjct: 70 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM-IQMAAEI 128
Query: 170 AQALDHCNSQNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMKN------SRDGKSYSTNLA 222
A + + N+ +K H DL A + D ++ FG+ ++ R G +
Sbjct: 129 ADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 186
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282
+ PE L+ G S ++S+G VL ++ S P L + L +MD Q
Sbjct: 187 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE-QPYQGLS--NEQVLKFVMDGGYLDQP 243
Query: 283 ANEDATQLVELASKCLQYEAKDRP 306
N ++ +L C Q+ K RP
Sbjct: 244 DNCPE-RVTDLMRMCWQFNPKMRP 266
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 3e-04
Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 25/204 (12%)
Query: 71 GDKAPNVVYRGRLKN-NRLVAIKRF--SRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCC 127
G+ + +V + + K ++VAIK+F S + E L +RH+ LVNLI
Sbjct: 10 GEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVF 69
Query: 128 AEGDERLLVAQYMPNDTLSKHLFHWDKQPLPW---EMRVR-VAYYIAQALDHCNSQNRKL 183
LV +++ + L D + P E RVR + I + ++ C+S N +
Sbjct: 70 RRKKRLYLVFEFVDHTVLD------DLEKYPNGLDESRVRKYLFQILRGIEFCHSHN-II 122
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMKN-SRDGKSYSTNLA---YTPPEFL----RTGRVI 235
+ D+ +L + G +L FG + + G+ Y+ +A Y PE L + GR +
Sbjct: 123 HRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAV 182
Query: 236 PESVIYSYGTVLLDLLSGKHIPPS 259
I++ G ++ ++L+G+ + P
Sbjct: 183 D---IWAVGCLVTEMLTGEPLFPG 203
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 4e-04
Identities = 51/230 (22%), Positives = 102/230 (44%), Gaps = 15/230 (6%)
Query: 89 VAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKH 148
VAIK+ + Q P + E + +H +VN + GDE +V +Y+ +L+
Sbjct: 47 VAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 106
Query: 149 LFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLM 208
+ + + V QAL+ +S N+ ++ D+ + +L DG +L+ FG
Sbjct: 107 V---TETCMDEGQIAAVCRECLQALEFLHS-NQVIHRDIKSDNILLGMDGSVKLTDFGFC 162
Query: 209 KNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDV 264
+S + + TP PE + P+ I+S G + ++++ G+ PP +
Sbjct: 163 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE--PPYLNENP 220
Query: 265 IRGKNLLLLMDSSLEGQYANEDATQLV--ELASKCLQYEAKDRPDVKFLL 312
+R L L+ ++ + N + + + ++CL+ + + R K LL
Sbjct: 221 LRA---LYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELL 267
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 4e-04
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 9/155 (5%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR 164
F++EA+ +G H +++L G + ++V +YM N +L L D Q ++ V
Sbjct: 52 FLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQL-VG 110
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KSYSTN-- 220
+ IA + + S ++ DL A +L + + ++S FGL + D +Y+T
Sbjct: 111 MLRGIASGMKYL-SDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 169
Query: 221 ---LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
+ +T PE + + S ++SYG V+ +++S
Sbjct: 170 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 204
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 4e-04
Identities = 50/251 (19%), Positives = 104/251 (41%), Gaps = 22/251 (8%)
Query: 79 YRGR-LKNNRLVAIKRFSRQSWPDPHQ------FVTEAAGLGNVRHKRLVNLIGCCAEGD 131
Y+ R +K L+A+K+ + Q E + + H ++ ++G E
Sbjct: 17 YQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDS 76
Query: 132 ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYR 191
L ++M ++S HL + + + + L + + +N+ ++ D+
Sbjct: 77 HFNLFVEWMAGGSVS-HLLS-KYGAFKEAVIINYTEQLLRGLSYLH-ENQIIHRDVKGAN 133
Query: 192 VLFDEDG-DPRLSSFGLM-----KNSRDGK---SYSTNLAYTPPEFLRTGRVIPESVIYS 242
+L D G R++ FG K + G+ +A+ PE LR + ++S
Sbjct: 134 LLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWS 193
Query: 243 YGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQ-LVELASKCLQYE 301
G V++++ + K PP +A L+ + S+ E + L ++ +CL+ +
Sbjct: 194 VGCVIIEMATAK--PPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQ 251
Query: 302 AKDRPDVKFLL 312
+DRP + LL
Sbjct: 252 PEDRPPSRELL 262
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 4e-04
Identities = 60/251 (23%), Positives = 101/251 (40%), Gaps = 32/251 (12%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVT-EAAGLGNVRHKRLVNLIGCCAEGDERL 134
VY+ + N++VAIK + D + + E L R + G +G +
Sbjct: 16 EVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLW 75
Query: 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194
++ +Y + L L + + L++ + + K++ D+ A +L
Sbjct: 76 IIMEYCGGGSCLDLL---KPGKLDETYIAFILREVLLGLEYLHEE-GKIHRDIKAANILL 131
Query: 195 DEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESV------IYSYG 244
E+GD +L+ FG+ S TP PE VI +S I+S G
Sbjct: 132 SEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPE------VIKQSGYDEKADIWSLG 185
Query: 245 TVLLDLLSGKHIPPSHALDVIRGKNLLLLMDS---SLEGQYANEDATQLVELASKCLQYE 301
++L G+ PP L +R L L+ + SLEG N+ + + S CL +
Sbjct: 186 ITAIELAKGE--PPLSDLHPMRV--LFLIPKNNPPSLEG---NKFSKPFKDFVSLCLNKD 238
Query: 302 AKDRPDVKFLL 312
K+RP K LL
Sbjct: 239 PKERPSAKELL 249
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 5e-04
Identities = 51/227 (22%), Positives = 90/227 (39%), Gaps = 38/227 (16%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR 164
F A+ + V H L + G C G E ++V +++ + L +K +P ++
Sbjct: 63 FFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDV-CLRKEKGRVPVAWKIT 121
Query: 165 VAYYIAQALDHCNSQNRKLYH-DLNAYRVLFDEDG------------DPRLSSFGLMKNS 211
VA +A AL + +++ L H ++ A +L G DP +S L +
Sbjct: 122 VAQQLASALSYL--EDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREE 179
Query: 212 RDGKSYSTNLAYTPPEFLRTGRVI-PESVIYSYGTVLLDLLSGKHIP-----PSHALDVI 265
R + + + PE + G + + +S+GT LL++ +P PS
Sbjct: 180 RVER-----IPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFY 234
Query: 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLL 312
K+ L +L L S+CL YE RP + +L
Sbjct: 235 EKKHRL-----------PEPSCKELATLISQCLTYEPTQRPSFRTIL 270
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 5e-04
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 12/201 (5%)
Query: 71 GDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCA 128
G+ V++GR K LVA+K + P + E + L +++H +V L
Sbjct: 15 GEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVH 74
Query: 129 EGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV-AYYIAQALDHCNSQNRKLYHDL 187
LV +Y+ D L +++ D + V++ Y I + L +C+ + + L+ DL
Sbjct: 75 TDKSLTLVFEYLDKD-LKQYMD--DCGNIMSMHNVKIFLYQILRGLAYCH-RRKVLHRDL 130
Query: 188 NAYRVLFDEDGDPRLSSFGLMK-NSRDGKSYST---NLAYTPPEFLRTGRVIPESV-IYS 242
+L +E G+ +L+ FGL + S K+YS L Y PP+ L + ++
Sbjct: 131 KPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWG 190
Query: 243 YGTVLLDLLSGKHIPPSHALD 263
G + ++ SG+ + P ++
Sbjct: 191 VGCIFFEMASGRPLFPGSTVE 211
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 5e-04
Identities = 49/196 (25%), Positives = 90/196 (45%), Gaps = 12/196 (6%)
Query: 71 GDKAPNVVYRGRLK-NNRLVAIKRFS-RQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA 128
G+ V++GR K LVA+K P + E + L N++H +V L
Sbjct: 14 GEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIH 73
Query: 129 EGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DL 187
LV +Y+ +D L ++L + +++ + + + L +C+ RK+ H DL
Sbjct: 74 TERCLTLVFEYLDSD-LKQYLDNCGNLMSMHNVKI-FMFQLLRGLSYCH--KRKILHRDL 129
Query: 188 NAYRVLFDEDGDPRLSSFGLMK-NSRDGKSYST---NLAYTPPEFLRTGRVIPESV-IYS 242
+L +E G+ +L+ FGL + S K+YS L Y PP+ L + ++
Sbjct: 130 KPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWG 189
Query: 243 YGTVLLDLLSGKHIPP 258
G +L ++ +G+ + P
Sbjct: 190 VGCILYEMATGRPMFP 205
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 5e-04
Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 9/134 (6%)
Query: 130 GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCN--SQNRKLYHDL 187
D LV +Y+ + + P W YIA+ + Q ++ D+
Sbjct: 69 KDYLYLVMEYLNGGDCASLIKTLGGLPEDW-----AKQYIAEVVLGVEDLHQRGIIHRDI 123
Query: 188 NAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVL 247
+L D+ G +L+ FGL +N + K + Y PE + S +S G V+
Sbjct: 124 KPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVI 183
Query: 248 LDLLSGKHIPPSHA 261
+ L G PP HA
Sbjct: 184 FEFLFG--YPPFHA 195
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 5e-04
Identities = 47/184 (25%), Positives = 77/184 (41%), Gaps = 21/184 (11%)
Query: 84 KNNRLVAIKRFSRQ--------SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
KN+++ A+K ++ W + V E A + LV L C L
Sbjct: 18 KNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQAS----SNPFLVGLHSCFQTTSRLFL 73
Query: 136 VAQYMPNDTLSKHLFHWDKQ-PLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194
V +Y+ L +FH +Q LP E A I AL+ + + +Y DL VL
Sbjct: 74 VIEYVNGGDL---MFHMQRQRKLPEEHARFYAAEICIALNFLHERG-IIYRDLKLDNVLL 129
Query: 195 DEDGDPRLSSFGLMKNS-RDGKSYSTNLA---YTPPEFLRTGRVIPESVIYSYGTVLLDL 250
D DG +L+ +G+ K G + ST Y PE LR ++ G ++ ++
Sbjct: 130 DADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEM 189
Query: 251 LSGK 254
++G+
Sbjct: 190 MAGR 193
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 6e-04
Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 23/185 (12%)
Query: 84 KNNRLVAIKRFSRQ--------SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
K R+ A+K ++ W + V E A H LV L C
Sbjct: 18 KTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETAS----NHPFLVGLHSCFQTESRLFF 73
Query: 136 VAQYMPNDTLSKHLFHWDKQ-PLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194
V +++ L +FH +Q LP E + I+ AL+ + + +Y DL VL
Sbjct: 74 VIEFVSGGDL---MFHMQRQRKLPEEHARFYSAEISLALNFLHERG-IIYRDLKLDNVLL 129
Query: 195 DEDGDPRLSSFGLMK-NSRDGKSYSTNLA---YTPPEFLRTGRVIPESV-IYSYGTVLLD 249
D +G +L+ +G+ K R G + ST Y PE LR G SV ++ G ++ +
Sbjct: 130 DAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILR-GEDYGFSVDWWALGVLMFE 188
Query: 250 LLSGK 254
+++G+
Sbjct: 189 MMAGR 193
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 6e-04
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQNRKLYHDLNAYR 191
LV M L H+++ ++ L E RV +Y AQ + H +S + +Y D+
Sbjct: 70 LVMSLMNGGDLKYHIYNVGERGLEME---RVIHYSAQITCGILHLHSMD-IVYRDMKPEN 125
Query: 192 VLFDEDGDPRLSSFGLMKNSRDGKSYS----TNLAYTPPEFLR 230
VL D+ G+ RLS GL +DGK+ + TN Y PE L+
Sbjct: 126 VLLDDQGNCRLSDLGLAVELKDGKTITQRAGTN-GYMAPEILK 167
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 7e-04
Identities = 59/253 (23%), Positives = 110/253 (43%), Gaps = 25/253 (9%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPDPHQ---FVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
VVY+ L + R+VA+K+ D + E L + H ++ + E +E
Sbjct: 17 VVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNE 76
Query: 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYY--IAQALDHCNSQNRKLYHDLNAY 190
+V + LS+ + H+ KQ R Y+ + AL+H +S+ R ++ D+
Sbjct: 77 LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK-RIMHRDIKPA 135
Query: 191 RVLFDEDGDPRLSSFGLMK--NSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSYG 244
V G +L GL + +S+ ++S L TP PE + +S I+S G
Sbjct: 136 NVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYMSPERIHENGYNFKSDIWSLG 193
Query: 245 TVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY----ANEDATQLVELASKCLQY 300
+L ++ + + P + NL L + Y A+ + +L +L S+C+
Sbjct: 194 CLLYEMAALQ--SPFYG----DKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINP 247
Query: 301 EAKDRPDVKFLLS 313
+ + RPD+ ++L
Sbjct: 248 DPEKRPDISYVLQ 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 8e-04
Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 11/138 (7%)
Query: 126 CCAEGDERLL-VAQYMPNDTLSKHLFHWDKQPLPWEMRVRV-AYYIAQALDHCNSQNRKL 183
CC + +RL V +++ L +FH K E R R A I AL + + +
Sbjct: 63 CCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARARFYAAEITSALMFLHDKG-II 118
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMKNS-RDGKSYSTNLA---YTPPEFLRTGRVIPESV 239
Y DL VL D +G +L+ FG+ K +GK+ ST Y PE L+ P
Sbjct: 119 YRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVD 178
Query: 240 IYSYGTVLLDLLSGKHIP 257
++ G +L ++L G H P
Sbjct: 179 WWAMGVLLYEMLCG-HAP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 17/160 (10%)
Query: 108 EAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAY 167
E A L ++H+ +V +G + D + +Y+P +++ L ++ V
Sbjct: 56 EIALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETL-----VRN 110
Query: 168 YIAQALDHCNS-QNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMK----NSRDGK------ 215
++ Q L N NR + H D+ +L D G ++S FG+ K NS K
Sbjct: 111 FVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARP 170
Query: 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKH 255
S ++ + PE ++ ++ I+S G +++++L+GKH
Sbjct: 171 SLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKH 210
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.001
Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 13/131 (9%)
Query: 106 VTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV 165
+TE+ L N RH L L D V +Y L FH ++ + E R R
Sbjct: 43 LTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRAR- 98
Query: 166 AYY---IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS-RDGKSYST-- 219
+Y I AL + +S + +Y DL ++ D+DG +++ FGL K DG + T
Sbjct: 99 -FYGAEIVSALGYLHSCD-VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC 156
Query: 220 -NLAYTPPEFL 229
Y PE L
Sbjct: 157 GTPEYLAPEVL 167
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.001
Identities = 31/133 (23%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Query: 157 LPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD--G 214
+P ++ +V+ + + L + +++ ++ D+ +L + G+ +L FG+ D
Sbjct: 100 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 159
Query: 215 KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKH-IPPSHALDVIRGKNLLLL 273
S+ +Y PE L+ +S I+S G L+++ G++ IPP A K L L+
Sbjct: 160 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDA------KELELM 213
Query: 274 MDSSLEGQYANED 286
+EG A +
Sbjct: 214 FGCPVEGDPAESE 226
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.001
Identities = 52/238 (21%), Positives = 96/238 (40%), Gaps = 16/238 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136
VY+ R K VAIK ++ + + EA + + + +V +IG C E + +LV
Sbjct: 15 VYKMR-KKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVC-EAEALMLV 72
Query: 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE 196
+ L+K L K + V + + ++ + + +N ++ DL A VL
Sbjct: 73 MEMASGGPLNKFLSG-KKDEITVSNVVELMHQVSMGMKYLEGKNF-VHRDLAARNVLLVN 130
Query: 197 DGDPRLSSFGLMKNSRDGKSYSTN-------LAYTPPEFLRTGRVIPESVIYSYGTVLLD 249
++S FGL K SY L + PE + + S ++SYG + +
Sbjct: 131 QHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWE 190
Query: 250 LLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPD 307
S P ++G ++ ++ E ++ L C Y+ +DRP+
Sbjct: 191 AFSYGQKPYKK----MKGPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPN 244
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.001
Identities = 56/240 (23%), Positives = 96/240 (40%), Gaps = 27/240 (11%)
Query: 86 NRLVAIKRFS------RQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139
N +VA+K+ S + W D + E L ++H + GC + LV +Y
Sbjct: 46 NEVVAVKKMSYSGKQTNEKWQD---IIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102
Query: 140 M---PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE 196
+D L H K+PL + + Q L + +S N ++ D+ A +L E
Sbjct: 103 CLGSASDLLEVH-----KKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTE 156
Query: 197 DGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEF---LRTGRVIPESVIYSYGTVLLDLLSG 253
G +L+ FG S S+ + PE + G+ + ++S G ++L
Sbjct: 157 PGQVKLADFGSASKSSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 216
Query: 254 KHIPPSHALDVIRGKNLLLLMDS-SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLL 312
K PP ++ + + DS +L+ +NE CLQ ++RP LL
Sbjct: 217 K--PPLFNMNAMSALYHIAQNDSPTLQ---SNEWTDSFRGFVDYCLQKIPQERPASAELL 271
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.001
Identities = 57/262 (21%), Positives = 103/262 (39%), Gaps = 54/262 (20%)
Query: 78 VYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136
VY+ + ++VAIK D + + E + L +V G + + +V
Sbjct: 19 VYKAIHKETGQVVAIKVVP--VEEDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIV 76
Query: 137 AQY-----------MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH 185
+Y + N TL++ E+ + Y + L++ +S N+K++
Sbjct: 77 MEYCGAGSVSDIMKITNKTLTEE-----------EIAA-ILYQTLKGLEYLHS-NKKIHR 123
Query: 186 DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESV-- 239
D+ A +L +E+G +L+ FG+ D + + TP PE VI E
Sbjct: 124 DIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPE------VIQEIGYN 177
Query: 240 ----IYSYGTVLLDLLSGK----HIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291
I+S G +++ GK I P A+ +I K L D + + +
Sbjct: 178 NKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPE-------KWSPEFN 230
Query: 292 ELASKCLQYEAKDRPDVKFLLS 313
+ KCL + ++RP LL
Sbjct: 231 DFVKKCLVKDPEERPSAIQLLQ 252
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 11/185 (5%)
Query: 77 VVYRGRLKNNR-LVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
V++ + + +VA+KR + P + E L ++HK +V L +
Sbjct: 15 TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKL 74
Query: 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVL 193
LV +Y D L K+ + P ++ + + + L C+S N L+ DL +L
Sbjct: 75 TLVFEYCDQD-LKKYFDSCNGDIDPEIVK-SFMFQLLKGLAFCHSHN-VLHRDLKPQNLL 131
Query: 194 FDEDGDPRLSSFGLMKN-SRDGKSYS---TNLAYTPPEFLRTGRVIPESV-IYSYGTVLL 248
+++G+ +L+ FGL + + YS L Y PP+ L ++ S+ ++S G +
Sbjct: 132 INKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA 191
Query: 249 DLLSG 253
+L +
Sbjct: 192 ELANA 196
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.002
Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 21/184 (11%)
Query: 84 KNNRLVAIKRFSRQ--------SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
K R+ A+K ++ W + V E A H LV L C
Sbjct: 18 KTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS----NHPFLVGLHSCFQTESRLFF 73
Query: 136 VAQYMPNDTLSKHLFHWDKQ-PLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194
V +Y+ L +FH +Q LP E + I+ AL++ + + +Y DL VL
Sbjct: 74 VIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLL 129
Query: 195 DEDGDPRLSSFGLMKNS-RDGKSYSTNLA---YTPPEFLRTGRVIPESVIYSYGTVLLDL 250
D +G +L+ +G+ K R G + ST Y PE LR ++ G ++ ++
Sbjct: 130 DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 189
Query: 251 LSGK 254
++G+
Sbjct: 190 MAGR 193
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.002
Identities = 33/170 (19%), Positives = 70/170 (41%), Gaps = 19/170 (11%)
Query: 154 KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD 213
+ +P + ++A + + L + + +++ ++ D+ +L + G +L FG+ +
Sbjct: 94 QGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVN 153
Query: 214 --GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL 271
K++ +Y PE ++ +S I+S G L++L +G+ P N
Sbjct: 154 SLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPE--------NDP 205
Query: 272 LLMDSSLEGQYANEDATQL---------VELASKCLQYEAKDRPDVKFLL 312
L NE +L + + CL + ++RP K LL
Sbjct: 206 PDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELL 255
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.002
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 12/201 (5%)
Query: 71 GDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCA 128
G+ VY+GR K + LVA+K + P + E + L +++H +V L
Sbjct: 15 GEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH 74
Query: 129 EGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV-AYYIAQALDHCNSQNRKLYHDL 187
LV +Y+ D L ++L D V++ + + + L++C+ + + L+ DL
Sbjct: 75 TEKSLTLVFEYLDKD-LKQYLD--DCGNSINMHNVKLFLFQLLRGLNYCHRR-KVLHRDL 130
Query: 188 NAYRVLFDEDGDPRLSSFGLMK-NSRDGKSYST---NLAYTPPEFLRTGRVIPESV-IYS 242
+L +E G+ +L+ FGL + S K+YS L Y PP+ L + ++
Sbjct: 131 KPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWG 190
Query: 243 YGTVLLDLLSGKHIPPSHALD 263
G + ++ +G+ + P ++
Sbjct: 191 VGCIFYEMSTGRPLFPGSTVE 211
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.002
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 23/158 (14%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYM--------------PNDTLSKHLFHWDKQPLPWEM 161
+HK ++NL+G C + +V +Y P + S ++ L +
Sbjct: 74 KHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKD 133
Query: 162 RVRVAYYIAQALDHCNSQNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSY--S 218
V AY +A+ ++ S+ K H DL A VL ED +++ FGL ++ Y +
Sbjct: 134 LVSFAYQVARGMEFLASK--KCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKT 191
Query: 219 TN----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
TN + + PE L +S ++S+G +L ++ +
Sbjct: 192 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 229
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.002
Identities = 61/261 (23%), Positives = 104/261 (39%), Gaps = 48/261 (18%)
Query: 78 VYRGRLKN------NRLVAIKR-FSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG 130
VY G K VAIK S + +F+ EA+ + +V L+G + G
Sbjct: 22 VYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG 81
Query: 131 DERLLVAQYMPNDTLSKHL--------FHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRK 182
L+V + M L +L + P + +++A IA + + + +K
Sbjct: 82 QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA--KK 139
Query: 183 LYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN-----------LAYTPPEFLR 230
H DL A + ED ++ FG+ +RD Y T+ + + PE L+
Sbjct: 140 FVHRDLAARNCMVAEDLTVKIGDFGM---TRD--IYETDYYRKGGKGLLPVRWMAPESLK 194
Query: 231 TGRVIPESVIYSYGTVLLDLLSGKHIP---PSH--ALDVIRGKNLLLLMDSSLEGQYANE 285
G +S ++S+G VL ++ + P S+ L + L L ++ +
Sbjct: 195 DGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDLPENCPD------ 248
Query: 286 DATQLVELASKCLQYEAKDRP 306
+L+EL C QY K RP
Sbjct: 249 ---KLLELMRMCWQYNPKMRP 266
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 39.7 bits (92), Expect = 0.002
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 19/170 (11%)
Query: 71 GDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCA 128
G+ + VY+G+ K N +LVA+K Q P + EA+ L ++H +V L
Sbjct: 14 GEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIH 73
Query: 129 EGDERLLVAQYMPNDT---LSKHL--FHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKL 183
+ LV +Y+ D + KH H + L +R YI Q L
Sbjct: 74 TKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYI--------HQRYIL 125
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMK-NSRDGKSYST---NLAYTPPEFL 229
+ DL +L + G+ +L+ FGL + S +YS L Y PP+ L
Sbjct: 126 HRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVL 175
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.003
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 16/146 (10%)
Query: 126 CCAEGDERLL-VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRK-- 182
C + E L V +Y+ L H+ K LP R +Y A+ + + K
Sbjct: 63 CTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLP-----RATFYAAEIICGLQFLHSKGI 117
Query: 183 LYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPES 238
+Y DL +L D DG +++ FG+ K + G + + TP PE L G+ S
Sbjct: 118 VYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEIL-LGQKYNTS 176
Query: 239 V-IYSYGTVLLDLLSGKHIPPSHALD 263
V +S+G +L ++L G+ P H D
Sbjct: 177 VDWWSFGVLLYEMLIGQ--SPFHGHD 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.003
Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 4/152 (2%)
Query: 106 VTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV 165
+ E L V + +VNL D LV M L H+++ E +
Sbjct: 48 LNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFY 107
Query: 166 AYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYS---TNLA 222
A I L+ + +N +Y DL +L D+ G R+S GL +G+S +
Sbjct: 108 AAEILCGLEDLHREN-TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRVGTVG 166
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGK 254
Y PE L R + G ++ +++ G+
Sbjct: 167 YMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQ 198
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 0.003
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 19/156 (12%)
Query: 112 LGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ 171
L V+H +V+LI G + L+ +Y+ L HL +++ + M +Y+++
Sbjct: 54 LEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHL---EREGI--FMEDTACFYLSE 108
Query: 172 ---ALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS----YSTNLAYT 224
AL+H + Q +Y DL +L D G +L+ FGL K S + + + Y
Sbjct: 109 ISLALEHLHQQG-IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYM 167
Query: 225 PPEFL-RTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE L R+G ++V +S G ++ D+L+G PP
Sbjct: 168 APEILMRSGH--GKAVDWWSLGALMYDMLTGA--PP 199
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.004
Identities = 63/253 (24%), Positives = 102/253 (40%), Gaps = 36/253 (14%)
Query: 78 VYRGR-LKNNRLVAIKRFS---RQS---WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG 130
VY R ++ N +VAIK+ S +QS W D + E L +RH + GC
Sbjct: 31 VYFARDVRTNEVVAIKKMSYSGKQSNEKWQD---IIKEVRFLQQLRHPNTIEYKGCYLRE 87
Query: 131 DERLLVAQYM---PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDL 187
LV +Y +D L H K+PL + + Q L + +S R ++ D+
Sbjct: 88 HTAWLVMEYCLGSASDILEVH-----KKPLQEVEIAAICHGALQGLAYLHSHER-IHRDI 141
Query: 188 NAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFL-------RTGRVIPESVI 240
A +L E G +L+ FG S+ + PE + G+V +
Sbjct: 142 KAGNILLTEPGTVKLADFGSASLVSPANSFVGTPYWMAPEVILAMDEGQYDGKVD----V 197
Query: 241 YSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDS-SLEGQYANEDATQLVELASKCLQ 299
+S G ++L K PP ++ + + DS +L ++ V+ CLQ
Sbjct: 198 WSLGITCIELAERK--PPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVD---SCLQ 252
Query: 300 YEAKDRPDVKFLL 312
+DRP + LL
Sbjct: 253 KIPQDRPSSEELL 265
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.004
Identities = 50/204 (24%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKR 119
+S L + + G+ + VY+G + N +LVA+K S ++ P + EA+ L ++H
Sbjct: 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHAN 64
Query: 120 LVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQ 179
+V L + V +YM D L++++ P+ +R+ + + + L + + Q
Sbjct: 65 IVLLHDIIHTKETLTFVFEYMHTD-LAQYMIQHPGGLHPYNVRL-FMFQLLRGLAYIHGQ 122
Query: 180 NRKLYHDLNAYRVLFDEDGDPRLSSFGLMK-NSRDGKSYST---NLAYTPPEFLRTGRVI 235
L+ DL +L G+ +L+ FGL + S ++YS+ L Y PP+ L
Sbjct: 123 -HILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDY 181
Query: 236 PESV-IYSYGTVLLDLLSGKHIPP 258
++ I+ G + +++L G+ P
Sbjct: 182 SSALDIWGAGCIFIEMLQGQPAFP 205
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.004
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 20/158 (12%)
Query: 67 VSESGDKAPNVVYRGR-LKNN-RLVAIKRFSRQSWPD--PHQFVTEAAGLGNVR---HKR 119
V+E G+ A V++ R LKN R VA+KR Q+ + P + E A L ++ H
Sbjct: 6 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPN 65
Query: 120 LVNLIGCCA----EGDERL-LVAQYMPNDTLSKHLFHWDKQP---LPWEMRVRVAYYIAQ 171
+V L C + + +L LV +++ D L+ +L DK P +P E + + + +
Sbjct: 66 VVRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYL---DKVPEPGVPTETIKDMMFQLLR 121
Query: 172 ALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK 209
LD +S +R ++ DL +L G +L+ FGL +
Sbjct: 122 GLDFLHS-HRVVHRDLKPQNILVTSSGQIKLADFGLAR 158
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 497 | |||
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 100.0 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 100.0 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 100.0 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 100.0 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 100.0 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 100.0 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 100.0 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 100.0 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.98 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.97 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.97 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.97 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.97 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.96 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.96 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.96 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.95 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.95 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.94 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.92 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.91 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.9 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.9 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.89 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.89 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.89 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.88 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.88 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.88 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.87 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.85 | |
| KOG0553 | 304 | consensus TPR repeat-containing protein [General f | 99.84 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.84 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.83 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.82 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.8 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.8 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.8 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.79 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.79 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.77 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.76 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.75 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.75 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.73 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.72 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.72 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.7 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.69 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.68 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.67 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.66 | |
| PRK15363 | 157 | pathogenicity island 2 chaperone protein SscA; Pro | 99.65 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.64 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.6 | |
| KOG0553 | 304 | consensus TPR repeat-containing protein [General f | 99.6 | |
| KOG4234 | 271 | consensus TPR repeat-containing protein [General f | 99.59 | |
| PLN03088 | 356 | SGT1, suppressor of G2 allele of SKP1; Provisional | 99.59 | |
| TIGR02552 | 135 | LcrH_SycD type III secretion low calcium response | 99.58 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.58 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.58 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.57 | |
| KOG0550 | 486 | consensus Molecular chaperone (DnaJ superfamily) [ | 99.57 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.57 | |
| KOG4648 | 536 | consensus Uncharacterized conserved protein, conta | 99.57 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.56 | |
| PLN02789 | 320 | farnesyltranstransferase | 99.55 | |
| KOG0543 | 397 | consensus FKBP-type peptidyl-prolyl cis-trans isom | 99.54 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.54 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.53 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.51 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.49 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.49 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.48 | |
| KOG1125 | 579 | consensus TPR repeat-containing protein [General f | 99.47 | |
| PRK09782 | 987 | bacteriophage N4 receptor, outer membrane subunit; | 99.47 | |
| PLN02789 | 320 | farnesyltranstransferase | 99.45 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.44 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.44 | |
| TIGR02521 | 234 | type_IV_pilW type IV pilus biogenesis/stability pr | 99.43 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.43 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.43 | |
| KOG1155 | 559 | consensus Anaphase-promoting complex (APC), Cdc23 | 99.42 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.41 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.4 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.4 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.39 | |
| PRK09782 | 987 | bacteriophage N4 receptor, outer membrane subunit; | 99.37 | |
| TIGR02521 | 234 | type_IV_pilW type IV pilus biogenesis/stability pr | 99.37 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.36 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.36 | |
| TIGR02795 | 119 | tol_pal_ybgF tol-pal system protein YbgF. Members | 99.36 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.36 | |
| cd00189 | 100 | TPR Tetratricopeptide repeat domain; typically con | 99.35 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.35 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.35 | |
| PRK15174 | 656 | Vi polysaccharide export protein VexE; Provisional | 99.34 | |
| PRK15363 | 157 | pathogenicity island 2 chaperone protein SscA; Pro | 99.33 | |
| TIGR03302 | 235 | OM_YfiO outer membrane assembly lipoprotein YfiO. | 99.33 | |
| PRK15174 | 656 | Vi polysaccharide export protein VexE; Provisional | 99.32 | |
| PRK02603 | 172 | photosystem I assembly protein Ycf3; Provisional | 99.32 | |
| PLN03088 | 356 | SGT1, suppressor of G2 allele of SKP1; Provisional | 99.32 | |
| KOG1155 | 559 | consensus Anaphase-promoting complex (APC), Cdc23 | 99.32 | |
| KOG4642 | 284 | consensus Chaperone-dependent E3 ubiquitin protein | 99.32 | |
| KOG0624 | 504 | consensus dsRNA-activated protein kinase inhibitor | 99.31 | |
| KOG4555 | 175 | consensus TPR repeat-containing protein [Function | 99.31 | |
| PF12895 | 84 | Apc3: Anaphase-promoting complex, cyclosome, subun | 99.3 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.29 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 99.28 | |
| CHL00033 | 168 | ycf3 photosystem I assembly protein Ycf3 | 99.28 | |
| PRK15331 | 165 | chaperone protein SicA; Provisional | 99.28 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.26 | |
| PRK11447 | 1157 | cellulose synthase subunit BcsC; Provisional | 99.26 |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-53 Score=411.27 Aligned_cols=273 Identities=33% Similarity=0.607 Sum_probs=237.5
Q ss_pred cccccCHHHHHHHhcCCCcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeee
Q 010932 45 AFKEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLI 124 (497)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~ 124 (497)
....|++.++..+|++|+..+++ |+|+||.||+|...+|..||||++.........+|.+|+.+|.+++|||||+++
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~i---g~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~Ll 137 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLI---GEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLL 137 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcce---ecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEE
Confidence 56789999999999999999888 899999999999998999999988765543135599999999999999999999
Q ss_pred eeeeeCC-ceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC--CcccccCCCcceEeCCCCCee
Q 010932 125 GCCAEGD-ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQN--RKLYHDLNAYRVLFDEDGDPR 201 (497)
Q Consensus 125 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~--~iiH~Dlkp~Nill~~~~~~k 201 (497)
|||.+.+ +.+||+||+++|+|.++|+......++|..+.+|+.++|+||+|||+.. +||||||||+|||+|.++++|
T Consensus 138 GyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 138 GYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 9999988 5999999999999999998743338999999999999999999999864 499999999999999999999
Q ss_pred EcccCCccccCC-CCcc----ccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCch-----------hhHHH
Q 010932 202 LSSFGLMKNSRD-GKSY----STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSH-----------ALDVI 265 (497)
Q Consensus 202 l~Dfgla~~~~~-~~~~----~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~-----------~~~~~ 265 (497)
|+|||+|+.... .... .||.+|+|||++..+..+.|+|||||||+|+||+||+.+.... ....+
T Consensus 218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 999999987654 3322 7899999999999999999999999999999999999754421 23344
Q ss_pred hccccccccccccC-CCCCH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 266 RGKNLLLLMDSSLE-GQYAN-EDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 266 ~~~~~~~~~~~~~~-~~~~~-~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
....+.+++|+.+. ..++. .....+..++.+|++.+|..||+|.+|++.|+.+..
T Consensus 298 ~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 298 EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 45578888999876 55554 577789999999999999999999999999866543
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-53 Score=394.01 Aligned_cols=249 Identities=20% Similarity=0.262 Sum_probs=210.6
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCC-CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCc-eEEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE-RLLVAQ 138 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~lv~e 138 (497)
++-..++.||+|..|+||+++++. ++.+|+|++.... ....+++.+|+++++..+||+||.+||.|..... ..|+||
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 355677889999999999999874 9999999995433 2336789999999999999999999999999985 999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--C
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNS-QNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--K 215 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~ 215 (497)
||++|+|..++.. .+.+++....+|+.+|++||.|||+ .+ ||||||||+||||+..|.|||||||.++..... .
T Consensus 159 YMDgGSLd~~~k~--~g~i~E~~L~~ia~~VL~GL~YLh~~~~-IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~ 235 (364)
T KOG0581|consen 159 YMDGGSLDDILKR--VGRIPEPVLGKIARAVLRGLSYLHEERK-IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIAN 235 (364)
T ss_pred hcCCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhccC-eeeccCCHHHeeeccCCCEEeccccccHHhhhhhcc
Confidence 9999999999965 4789999999999999999999996 56 999999999999999999999999999865443 6
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccc-cccccccccCCCCCHH-HHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKN-LLLLMDSSLEGQYANE-DATQLVEL 293 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~l~~l 293 (497)
++.||..|||||.+.+..|+.++||||||++++|+++|+.|++.........-. +..+++. ..+..|.. +++++.+|
T Consensus 236 tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~-ppP~lP~~~fS~ef~~F 314 (364)
T KOG0581|consen 236 TFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDE-PPPRLPEGEFSPEFRSF 314 (364)
T ss_pred cccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcC-CCCCCCcccCCHHHHHH
Confidence 789999999999999999999999999999999999999887654111111111 1112221 22344554 88999999
Q ss_pred HHHhcccCCCCCCCHHHHHHH
Q 010932 294 ASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 294 i~~cl~~dp~~Rps~~~ll~~ 314 (497)
+..||++||.+|||+.++++|
T Consensus 315 V~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 315 VSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred HHHHhcCCcccCCCHHHHhcC
Confidence 999999999999999999997
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-50 Score=392.67 Aligned_cols=253 Identities=26% Similarity=0.413 Sum_probs=215.8
Q ss_pred cccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCC-ceEEEEEcCCCC
Q 010932 67 VSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGD-ERLLVAQYMPND 143 (497)
Q Consensus 67 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~~~ 143 (497)
...+|.|+||+||+|.+++...||||++....... .+.|.+|+.+|.+++|||||+++|+|.... ..++||||+++|
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G 125 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG 125 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence 33479999999999999744449999998654433 458999999999999999999999999987 799999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC-CeeEcccCCccccCC----CCccc
Q 010932 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG-DPRLSSFGLMKNSRD----GKSYS 218 (497)
Q Consensus 144 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~----~~~~~ 218 (497)
+|.++++......+++..++.++.+|++||.|||++++||||||||+|||++.++ ++||+|||+++.... .....
T Consensus 126 sL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~ 205 (362)
T KOG0192|consen 126 SLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSVA 205 (362)
T ss_pred cHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccCCC
Confidence 9999997655689999999999999999999999998689999999999999997 999999999986543 23468
Q ss_pred cCCCCCCccccc--cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 219 TNLAYTPPEFLR--TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 219 gt~~y~aPE~~~--~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
||+.|||||++. ...|+.|+|||||||+||||+||+.||........ ...+.....+..++..+++.+..|+.+
T Consensus 206 GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~----~~~v~~~~~Rp~~p~~~~~~l~~l~~~ 281 (362)
T KOG0192|consen 206 GTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQV----ASAVVVGGLRPPIPKECPPHLSSLMER 281 (362)
T ss_pred CCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHH----HHHHHhcCCCCCCCccCCHHHHHHHHH
Confidence 999999999999 56899999999999999999999998865533111 122233444556666788999999999
Q ss_pred hcccCCCCCCCHHHHHHHhhhhhcccc
Q 010932 297 CLQYEAKDRPDVKFLLSAVAPLQKQTE 323 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~l~~~~~~~~ 323 (497)
||+.||..||++.+++..|+.+.....
T Consensus 282 CW~~dp~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 282 CWLVDPSRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred hCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence 999999999999999999998876433
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-50 Score=376.48 Aligned_cols=248 Identities=21% Similarity=0.222 Sum_probs=206.6
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC-------hhHHHHHHHHhccCCCCcceeeeeeeeeCCc
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD-------PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 132 (497)
++.|.+.+.||+|+||.|-+|..+ +|+.||||++++..... ...+.+|+++|++|+|||||+++++|...+.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 355667788999999999999965 59999999997643222 2346799999999999999999999999999
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC---CCeeEcccCCcc
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED---GDPRLSSFGLMK 209 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfgla~ 209 (497)
.||||||++||.|.+.+-. .+.+.+.....++.|++.|+.|||++| |+||||||+|||++.+ ..+||+|||+|+
T Consensus 251 ~YmVlE~v~GGeLfd~vv~--nk~l~ed~~K~~f~Qll~avkYLH~~G-I~HRDiKPeNILl~~~~e~~llKItDFGlAK 327 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVA--NKYLREDLGKLLFKQLLTAVKYLHSQG-IIHRDIKPENILLSNDAEDCLLKITDFGLAK 327 (475)
T ss_pred eEEEEEEecCccHHHHHHh--ccccccchhHHHHHHHHHHHHHHHHcC-cccccCCcceEEeccCCcceEEEecccchhh
Confidence 9999999999999999875 677888888999999999999999999 9999999999999866 789999999999
Q ss_pred ccCCC---CccccCCCCCCccccccCCC---CcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccc---cCC
Q 010932 210 NSRDG---KSYSTNLAYTPPEFLRTGRV---IPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSS---LEG 280 (497)
Q Consensus 210 ~~~~~---~~~~gt~~y~aPE~~~~~~~---~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 280 (497)
..... .+.+|||.|.|||++.+..+ ..+.|+||+||+||-+++|..||.....+.. ..+.+... ..+
T Consensus 328 ~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s----l~eQI~~G~y~f~p 403 (475)
T KOG0615|consen 328 VSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS----LKEQILKGRYAFGP 403 (475)
T ss_pred ccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc----HHHHHhcCcccccC
Confidence 87544 57899999999999986543 3478999999999999999999876532221 11111111 122
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010932 281 QYANEDATQLVELASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 281 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l 315 (497)
......+++..+||.+||..||++|||+.++|++=
T Consensus 404 ~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hp 438 (475)
T KOG0615|consen 404 LQWDRISEEALDLINWMLVVDPENRPSADEALNHP 438 (475)
T ss_pred hhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcCh
Confidence 33456789999999999999999999999999973
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-49 Score=370.76 Aligned_cols=248 Identities=22% Similarity=0.290 Sum_probs=208.4
Q ss_pred CCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCC--CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQS--WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
..+|.+.++||.|+||+||+|+++. +..||||.+.... ....+-+..|+.+|+.++|||||.+++++..++..||||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 4566777889999999999999864 8999999997663 233566889999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC------CCeeEcccCCcccc
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED------GDPRLSSFGLMKNS 211 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~------~~~kl~Dfgla~~~ 211 (497)
|||.||+|.++|+. .+.+++..++.++.||+.||.+||+++ ||||||||.||||+.. -.+||+|||+|+..
T Consensus 89 EyC~gGDLs~yi~~--~~~l~e~t~r~Fm~QLA~alq~L~~~~-IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRR--RGRLPEATARHFMQQLASALQFLHENN-IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EeCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 99999999999986 568999999999999999999999999 9999999999999864 45899999999987
Q ss_pred CCC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHH
Q 010932 212 RDG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288 (497)
Q Consensus 212 ~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (497)
... .+.+|+|.|||||++..++|+.|+|+||+|++||++++|+.||........... -..+.......+...+.
T Consensus 166 ~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~---~~k~~~~~~~~~~~~s~ 242 (429)
T KOG0595|consen 166 QPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLY---IKKGNEIVPVLPAELSN 242 (429)
T ss_pred CchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHH---HhccccccCchhhhccC
Confidence 765 467999999999999999999999999999999999999999875544433221 11112222334445556
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+.+|+...++.+|.+|-++.+-..+
T Consensus 243 ~~~~Ll~~ll~~~~~~~~~~~~~~~~ 268 (429)
T KOG0595|consen 243 PLRELLISLLQRNPKDRISFEDFFDH 268 (429)
T ss_pred chhhhhhHHHhcCccccCchHHhhhh
Confidence 67788899999999999877765553
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-50 Score=359.39 Aligned_cols=251 Identities=20% Similarity=0.282 Sum_probs=209.0
Q ss_pred CcccccccCCCCCCcEEEEEEE-cCCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeee-eeeeCCc-eEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRL-KNNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIG-CCAEGDE-RLLV 136 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~-~~~~~~~-~~lv 136 (497)
.++.+++++|.|+||.||++.. .+|..||.|.+.-.... ..+....|+.+|++|+|||||++++ .+.+... ++||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 3567888999999999999995 57999999999743322 2567899999999999999999998 4555544 8999
Q ss_pred EEcCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcC---CCcccccCCCcceEeCCCCCeeEcccCCcccc
Q 010932 137 AQYMPNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNSQ---NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS 211 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lh~~---~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 211 (497)
||+|.+|+|...+.+- .+..+++..+++++.|+++||.++|++ +.|+||||||.||+++.+|.|||+|||+++..
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 9999999999998643 356899999999999999999999982 34899999999999999999999999999987
Q ss_pred CCCC----ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCC-HHH
Q 010932 212 RDGK----SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA-NED 286 (497)
Q Consensus 212 ~~~~----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 286 (497)
.... +.+|||.||+||.+.+..|+.||||||+||++|||+.-++||.+.+....... +...-.++.| ...
T Consensus 179 ~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~K-----I~qgd~~~~p~~~Y 253 (375)
T KOG0591|consen 179 SSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKK-----IEQGDYPPLPDEHY 253 (375)
T ss_pred cchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHH-----HHcCCCCCCcHHHh
Confidence 6654 57899999999999999999999999999999999999999987643332221 2222223345 678
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHhhh
Q 010932 287 ATQLVELASKCLQYEAKDRPDVKFLLSAVAP 317 (497)
Q Consensus 287 ~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~ 317 (497)
+.++..||..|+..||+.||+.-.++..+..
T Consensus 254 S~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 254 STDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred hhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 9999999999999999999986555554433
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-49 Score=381.75 Aligned_cols=251 Identities=25% Similarity=0.388 Sum_probs=220.5
Q ss_pred ccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 64 ELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
..++++||+|-||.||.|.++....||+|.++... ...+.|.+|+++|++|+|+|||+++|+|..+..++|||||++.|
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G 286 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG 286 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence 35678899999999999999877799999998753 34578999999999999999999999999988999999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCc--cc---
Q 010932 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS--YS--- 218 (497)
Q Consensus 144 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--~~--- 218 (497)
+|.++|....+..+...+.+.++.|||+|++||++++ +|||||-..||||+++..+||+|||+|+...+..- ..
T Consensus 287 sLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~-~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~k 365 (468)
T KOG0197|consen 287 SLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN-YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGK 365 (468)
T ss_pred cHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC-ccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCC
Confidence 9999998877889999999999999999999999999 99999999999999999999999999995444321 11
Q ss_pred cCCCCCCccccccCCCCcccceeehhhhHHHHhhC-CCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHh
Q 010932 219 TNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSG-KHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKC 297 (497)
Q Consensus 219 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 297 (497)
-.+.|+|||.+..+.++.|||||||||+||||+|- +.|++.. ....+.+.++...+.+.|..||..+.+|+..|
T Consensus 366 fPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~m-----sn~ev~~~le~GyRlp~P~~CP~~vY~lM~~C 440 (468)
T KOG0197|consen 366 FPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGM-----SNEEVLELLERGYRLPRPEGCPDEVYELMKSC 440 (468)
T ss_pred CCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCC-----CHHHHHHHHhccCcCCCCCCCCHHHHHHHHHH
Confidence 24679999999999999999999999999999995 4454443 33345566777778888999999999999999
Q ss_pred cccCCCCCCCHHHHHHHhhhhhcc
Q 010932 298 LQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 298 l~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
|+.+|++|||++.+...|+.+...
T Consensus 441 W~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 441 WHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred hhCCcccCCCHHHHHHHHHHhhhc
Confidence 999999999999999998887643
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-49 Score=366.58 Aligned_cols=238 Identities=21% Similarity=0.249 Sum_probs=206.9
Q ss_pred CCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCC---CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSW---PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
.+++.+++.+|+|+||+||.++.++ ++.+|+|++++... .+.+....|..+|..++||+||.++..|++...+|||
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 3456788889999999999999765 99999999986533 2356789999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC----
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR---- 212 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~---- 212 (497)
+||+.||.|..+|.+ .+.+++..+.-++.+|+.||.|||++| ||||||||+|||+|.+|+++|+|||+++...
T Consensus 104 ld~~~GGeLf~hL~~--eg~F~E~~arfYlaEi~lAL~~LH~~g-IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~ 180 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQR--EGRFSEDRARFYLAEIVLALGYLHSKG-IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGD 180 (357)
T ss_pred EeccCCccHHHHHHh--cCCcchhHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHeeecCCCcEEEeccccchhcccCCC
Confidence 999999999999975 688999999999999999999999999 9999999999999999999999999998533
Q ss_pred CCCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 213 DGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 213 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
...+++||+.|||||++.+..|+..+|+||||+++|||++|.+||.......+....... .....+...+.+.++
T Consensus 181 ~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~-----k~~~~p~~ls~~ard 255 (357)
T KOG0598|consen 181 ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKG-----KLPLPPGYLSEEARD 255 (357)
T ss_pred ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcC-----cCCCCCccCCHHHHH
Confidence 234679999999999999999999999999999999999999999876544443322211 122334447888999
Q ss_pred HHHHhcccCCCCCC
Q 010932 293 LASKCLQYEAKDRP 306 (497)
Q Consensus 293 li~~cl~~dp~~Rp 306 (497)
++.++|+.||++|.
T Consensus 256 ll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 256 LLKKLLKRDPRQRL 269 (357)
T ss_pred HHHHHhccCHHHhc
Confidence 99999999999995
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-49 Score=383.67 Aligned_cols=244 Identities=18% Similarity=0.218 Sum_probs=212.9
Q ss_pred CcccccccCCCCCCcEEEEEEE-cCCcEEEEEEccCCCC---CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRL-KNNRLVAIKRFSRQSW---PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
..|...+.||+|+|++||.++. .+|+.||+|++.+... ...+.+.+||++.+.|+|||||+++++|++.++.|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4566667789999999999997 6799999999986432 33678999999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 214 (497)
|+|+.++|..++.. ++.+++.+++.++.||+.||.|||+++ |||||||..|+|++++.+|||+|||||......
T Consensus 98 ELC~~~sL~el~Kr--rk~ltEpEary~l~QIv~GlkYLH~~~-IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Er 174 (592)
T KOG0575|consen 98 ELCHRGSLMELLKR--RKPLTEPEARYFLRQIVEGLKYLHSLG-IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGER 174 (592)
T ss_pred EecCCccHHHHHHh--cCCCCcHHHHHHHHHHHHHHHHHHhcC-ceecccchhheeecCcCcEEecccceeeeecCcccc
Confidence 99999999998864 789999999999999999999999999 999999999999999999999999999876533
Q ss_pred -CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHH
Q 010932 215 -KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVEL 293 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 293 (497)
.+.+|||.|+|||++.....+..+||||+|||||.||+|++||............. .. ....|...+.++.+|
T Consensus 175 k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik--~~----~Y~~P~~ls~~A~dL 248 (592)
T KOG0575|consen 175 KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIK--LN----EYSMPSHLSAEAKDL 248 (592)
T ss_pred cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHH--hc----CcccccccCHHHHHH
Confidence 57899999999999998899999999999999999999999986653333222110 00 123456778889999
Q ss_pred HHHhcccCCCCCCCHHHHHHH
Q 010932 294 ASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 294 i~~cl~~dp~~Rps~~~ll~~ 314 (497)
|.++|+.||.+|||+.+||.+
T Consensus 249 I~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 249 IRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred HHHHhcCCcccCCCHHHHhcC
Confidence 999999999999999999986
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-49 Score=353.26 Aligned_cols=249 Identities=23% Similarity=0.327 Sum_probs=201.9
Q ss_pred cccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
.|..++++|+|+||+||++++++ |+.||||++..+.... .+-.++|+++|++++|+|+|.++.+|.....++||+||
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 46778899999999999999886 9999999997654322 45689999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----C
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----K 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 215 (497)
|+..-|.++- . ...+++...+.+++.|++.|+.|+|+++ +|||||||+||||+.+|.+||||||+|+..... +
T Consensus 83 ~dhTvL~eLe-~-~p~G~~~~~vk~~l~Q~l~ai~~cHk~n-~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YT 159 (396)
T KOG0593|consen 83 CDHTVLHELE-R-YPNGVPSELVKKYLYQLLKAIHFCHKNN-CIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYT 159 (396)
T ss_pred cchHHHHHHH-h-ccCCCCHHHHHHHHHHHHHHhhhhhhcC-eecccCChhheEEecCCcEEeccchhhHhhcCCcchhh
Confidence 9876555433 2 3678999999999999999999999999 999999999999999999999999999977633 3
Q ss_pred ccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHh-------cc---cccccccc--------
Q 010932 216 SYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIR-------GK---NLLLLMDS-------- 276 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~-------~~---~~~~~~~~-------- 276 (497)
.++.|.+|+|||.+.+ ..|....||||+||++.||++|.+.+|+...-... +. ....++..
T Consensus 160 DYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~ 239 (396)
T KOG0593|consen 160 DYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVR 239 (396)
T ss_pred hhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeee
Confidence 4677999999999998 67999999999999999999999888765211100 00 00001100
Q ss_pred --cc-----CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 277 --SL-----EGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 277 --~~-----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.. ....-+..+.-+.+|+..||+.||.+|+|.++++.+
T Consensus 240 lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 240 LPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred cCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 00 000112345678999999999999999999999975
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-47 Score=358.61 Aligned_cols=251 Identities=23% Similarity=0.333 Sum_probs=205.0
Q ss_pred ccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCC--ceEEEEEcC
Q 010932 64 ELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD--ERLLVAQYM 140 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~ 140 (497)
+...+.+|+|+||+||++...+ |..+|||.+........+.+.+|+.+|++++|||||+++|...... .+++.|||+
T Consensus 19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~ 98 (313)
T KOG0198|consen 19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYA 98 (313)
T ss_pred hhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeecc
Confidence 4556667999999999999764 9999999987653333567999999999999999999999855544 589999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC-CCCeeEcccCCccccCC------
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE-DGDPRLSSFGLMKNSRD------ 213 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~~~~~------ 213 (497)
++|+|.+++....+ .+++..++.+..||+.||.|||++| +|||||||+|||++. ++.+||+|||+++....
T Consensus 99 ~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g-~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~ 176 (313)
T KOG0198|consen 99 PGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKG-IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSD 176 (313)
T ss_pred CCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC-EeccCcccceEEEeCCCCeEEeccCcccccccccccccc
Confidence 99999999977444 8999999999999999999999999 999999999999999 79999999999886552
Q ss_pred -CCccccCCCCCCccccccCC-CCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHH
Q 010932 214 -GKSYSTNLAYTPPEFLRTGR-VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291 (497)
Q Consensus 214 -~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (497)
.....||+.|||||++..+. ...++|||||||++.||+||..|+... .. ....+..+......+.+|...+.++.
T Consensus 177 ~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~~--~~~~~~~ig~~~~~P~ip~~ls~~a~ 253 (313)
T KOG0198|consen 177 SELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-FE--EAEALLLIGREDSLPEIPDSLSDEAK 253 (313)
T ss_pred ccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-cc--hHHHHHHHhccCCCCCCCcccCHHHH
Confidence 23578999999999999643 345999999999999999998765432 00 00111111111223467788899999
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 292 ELASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
+|+.+|++.||+.|||+.++|++.....
T Consensus 254 ~Fl~~C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 254 DFLRKCFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred HHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence 9999999999999999999999854443
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-47 Score=340.20 Aligned_cols=236 Identities=20% Similarity=0.234 Sum_probs=208.8
Q ss_pred CCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCC---hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
.+++.+++.+|.|+||+|.+++.+. |..+|+|++++..... .+...+|..+|+.+.||+++++++.|.+.+.++||
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 4566788899999999999999764 8999999998765444 34678999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-C
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-K 215 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~ 215 (497)
|||++||-|..+|++ .++++++.++.++.||+.||+|||+++ |++|||||+|||+|.+|.+||+|||+|+..... -
T Consensus 123 meyv~GGElFS~Lrk--~~rF~e~~arFYAAeivlAleylH~~~-iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~ 199 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRK--SGRFSEPHARFYAAEIVLALEYLHSLD-IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTW 199 (355)
T ss_pred EeccCCccHHHHHHh--cCCCCchhHHHHHHHHHHHHHHHHhcC-eeeccCChHHeeeccCCcEEEEeccceEEecCcEE
Confidence 999999999999976 679999999999999999999999999 999999999999999999999999999976554 4
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
+.+|||.|+|||+++...++..+|+|||||++|||+.|..||..+....+... ++... -.+|...+.++.+|+.
T Consensus 200 TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~K----I~~~~--v~fP~~fs~~~kdLl~ 273 (355)
T KOG0616|consen 200 TLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEK----ILEGK--VKFPSYFSSDAKDLLK 273 (355)
T ss_pred EecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHH----HHhCc--ccCCcccCHHHHHHHH
Confidence 67999999999999999999999999999999999999999987655333322 22222 2467788899999999
Q ss_pred HhcccCCCCC
Q 010932 296 KCLQYEAKDR 305 (497)
Q Consensus 296 ~cl~~dp~~R 305 (497)
++|+.|-.+|
T Consensus 274 ~LL~vD~t~R 283 (355)
T KOG0616|consen 274 KLLQVDLTKR 283 (355)
T ss_pred HHHhhhhHhh
Confidence 9999999999
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-47 Score=363.22 Aligned_cols=250 Identities=20% Similarity=0.298 Sum_probs=207.3
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChh-HHHHHHHHhccCC-CCcceeeeeeeeeCC-ceEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPH-QFVTEAAGLGNVR-HKRLVNLIGCCAEGD-ERLLVA 137 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~-~~~~e~~~l~~l~-h~niv~~~~~~~~~~-~~~lv~ 137 (497)
..|.+++++|.|+||.||+|+.. +|..||||.+++......+ .-+||++.|++++ |||||++.+++.+.+ ++++||
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf 89 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF 89 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence 46789999999999999999965 5999999999876544322 3578999999998 999999999998887 999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 214 (497)
|||+ .+|.+++..+ +..|++..+..|+.||++||+|+|.+| +.|||+||+|||+..+..+||+|||+|+.....
T Consensus 90 E~Md-~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~G-fFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPY 166 (538)
T KOG0661|consen 90 EFMD-CNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHG-FFHRDLKPENILISGNDVIKIADFGLAREVRSKPPY 166 (538)
T ss_pred Hhhh-hhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcC-cccccCChhheEecccceeEecccccccccccCCCc
Confidence 9995 6899999876 889999999999999999999999999 999999999999999999999999999976655
Q ss_pred CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHH--Hh-----c----------ccccccccc
Q 010932 215 KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDV--IR-----G----------KNLLLLMDS 276 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~--~~-----~----------~~~~~~~~~ 276 (497)
+.++.|.+|+|||++.. +-|+.+.|+|++|||++|+.+-+++||+...-. .. + ..+...+.-
T Consensus 167 TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf 246 (538)
T KOG0661|consen 167 TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNF 246 (538)
T ss_pred chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhcc
Confidence 45678999999998864 678999999999999999999999998752111 00 0 011111111
Q ss_pred ccCC-------CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 277 SLEG-------QYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 277 ~~~~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+.. ..-+.++.++.++|.+||++||.+|||+.+++++
T Consensus 247 ~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 247 RFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred CCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1110 0112378899999999999999999999999997
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-46 Score=362.76 Aligned_cols=244 Identities=20% Similarity=0.331 Sum_probs=210.4
Q ss_pred cccccccCCCCCCcEEEEEEE-cCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 63 SELIVSESGDKAPNVVYRGRL-KNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
.+....++|+|+.|.||.+.. .+++.||||++........+-+.+|+.+|+..+|+|||.+++.|..++.+|+||||++
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ 353 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYME 353 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecC
Confidence 445556789999999999995 4589999999988777777889999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----Ccc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KSY 217 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 217 (497)
||+|.+.+. ...+++.++..|+++++.||+|||.+| |+|||||.+|||++.+|.+||+|||++...... .+.
T Consensus 354 ggsLTDvVt---~~~~~E~qIA~Icre~l~aL~fLH~~g-IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~Tm 429 (550)
T KOG0578|consen 354 GGSLTDVVT---KTRMTEGQIAAICREILQGLKFLHARG-IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTM 429 (550)
T ss_pred CCchhhhhh---cccccHHHHHHHHHHHHHHHHHHHhcc-eeeeccccceeEeccCCcEEEeeeeeeeccccccCccccc
Confidence 999999985 456999999999999999999999999 999999999999999999999999998765433 468
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccccc-ccccCCCCCHHHHHHHHHHHHH
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLM-DSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~ 296 (497)
+|||.|||||++....|.+|.||||||++++||+-|.+||..+. .++. +..+. ........+...+..+.+|+.+
T Consensus 430 VGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~--PlrA--lyLIa~ng~P~lk~~~klS~~~kdFL~~ 505 (550)
T KOG0578|consen 430 VGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNEN--PLRA--LYLIATNGTPKLKNPEKLSPELKDFLDR 505 (550)
T ss_pred cCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCC--hHHH--HHHHhhcCCCCcCCccccCHHHHHHHHH
Confidence 89999999999999999999999999999999999998875421 1111 11111 1112223456788999999999
Q ss_pred hcccCCCCCCCHHHHHHH
Q 010932 297 CLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~ 314 (497)
||+.|+++|+|+.++|+|
T Consensus 506 cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 506 CLVVDVEQRASAKELLEH 523 (550)
T ss_pred HhhcchhcCCCHHHHhcC
Confidence 999999999999999986
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-46 Score=374.51 Aligned_cols=318 Identities=21% Similarity=0.282 Sum_probs=265.3
Q ss_pred cccCHHHHHHHhcCCCcc------cccccCCCCCCcEEEEEEEcC----CcEEEEEEccCCCCCC-hhHHHHHHHHhccC
Q 010932 47 KEFVLADLRAATNGFSSE------LIVSESGDKAPNVVYRGRLKN----NRLVAIKRFSRQSWPD-PHQFVTEAAGLGNV 115 (497)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~------~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l 115 (497)
+.++++|--.+...|..+ .|-+.||.|-||.|++|+++- ...||||.++....+. +..|+.|+.+|.++
T Consensus 608 DP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF 687 (996)
T KOG0196|consen 608 DPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF 687 (996)
T ss_pred CCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC
Confidence 356677766666655432 334567999999999999863 3589999999765433 56899999999999
Q ss_pred CCCcceeeeeeeeeCCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC
Q 010932 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD 195 (497)
Q Consensus 116 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~ 195 (497)
.||||++|.|+.......+||+|||++|+|+.||+.++ +.|++.+...++++|+.|+.||-+.+ +|||||-..||||+
T Consensus 688 dHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm~-YVHRDLAARNILVN 765 (996)
T KOG0196|consen 688 DHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDMN-YVHRDLAARNILVN 765 (996)
T ss_pred CCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhcC-chhhhhhhhheeec
Confidence 99999999999999999999999999999999998764 56999999999999999999999999 99999999999999
Q ss_pred CCCCeeEcccCCccccCCCCc-cc----c--CCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhc
Q 010932 196 EDGDPRLSSFGLMKNSRDGKS-YS----T--NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRG 267 (497)
Q Consensus 196 ~~~~~kl~Dfgla~~~~~~~~-~~----g--t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~ 267 (497)
.+..+|++|||+++...+... .. | .+.|.|||.+...+++.+|||||||+||||.++ |.+|+..+ ..
T Consensus 766 snLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdm-----SN 840 (996)
T KOG0196|consen 766 SNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM-----SN 840 (996)
T ss_pred cceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccccc-----ch
Confidence 999999999999997755432 11 2 368999999999999999999999999999876 77877654 33
Q ss_pred cccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhccccchhhhhccCCCCCccC-------C
Q 010932 268 KNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSKAPVVL-------P 340 (497)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~-------p 340 (497)
.++...++...+.+.|.+||..+.+|+..||++|-.+||.+.+|+..|+++..++..........+.+..++ -
T Consensus 841 QdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~~~~~~~r~s~~lld~~~~~~ 920 (996)
T KOG0196|consen 841 QDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKTIAPESPRPSQPLLDRSGSDF 920 (996)
T ss_pred HHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcccCCCCCCCcccccCCCCCCC
Confidence 445566677777788899999999999999999999999999999999999988877655544443332222 2
Q ss_pred ccCCcchhhhhccchhHHHHHHHHhcccccc
Q 010932 341 TMLSSLGKACARMDLTAVHDILLKTGYKDEE 371 (497)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 371 (497)
+.+.++++|.+++.|..+.+.|...|+..++
T Consensus 921 ~~f~sv~~WL~aIkm~rY~~~F~~ag~~s~~ 951 (996)
T KOG0196|consen 921 TPFRSVGDWLEAIKMGRYKEHFAAAGYTSFE 951 (996)
T ss_pred cccCCHHHHHHHhhhhHHHHHHHhcCcccHH
Confidence 4455889999999999999999998887554
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-45 Score=353.00 Aligned_cols=238 Identities=21% Similarity=0.319 Sum_probs=207.7
Q ss_pred cccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCChh
Q 010932 67 VSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLS 146 (497)
Q Consensus 67 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 146 (497)
+.=||+|+.|.||+|+++ ++.||||+++.-. ..+|+-|++|+||||+.+.|+|.....+|||||||..|-|.
T Consensus 129 LeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence 445799999999999995 6889999986432 24688899999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---CccccCCCC
Q 010932 147 KHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---KSYSTNLAY 223 (497)
Q Consensus 147 ~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~gt~~y 223 (497)
.+|+. +..++......|..+|+.|+.|||.+. |||||||.-||||+.+..|||+|||-++..... .++.||..|
T Consensus 201 ~VLka--~~~itp~llv~Wsk~IA~GM~YLH~hK-IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaW 277 (904)
T KOG4721|consen 201 EVLKA--GRPITPSLLVDWSKGIAGGMNYLHLHK-IIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAW 277 (904)
T ss_pred HHHhc--cCccCHHHHHHHHHHhhhhhHHHHHhh-HhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhh
Confidence 99976 778999999999999999999999998 999999999999999999999999998865443 468999999
Q ss_pred CCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCCC
Q 010932 224 TPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAK 303 (497)
Q Consensus 224 ~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 303 (497)
||||+++..+++.|+|||||||||||||||..|+..-... ..+..+-...+....|..++..++-|+++||+..|.
T Consensus 278 MAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss----AIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpR 353 (904)
T KOG4721|consen 278 MAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS----AIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPR 353 (904)
T ss_pred hCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh----eeEEeccCCcccccCcccCchHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999887443222 123333344455667888999999999999999999
Q ss_pred CCCCHHHHHHHhhhhh
Q 010932 304 DRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 304 ~Rps~~~ll~~l~~~~ 319 (497)
.||++++++.||+...
T Consensus 354 NRPSFrqil~HldIa~ 369 (904)
T KOG4721|consen 354 NRPSFRQILLHLDIAS 369 (904)
T ss_pred CCccHHHHHHHHhhcC
Confidence 9999999999988765
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-45 Score=352.50 Aligned_cols=243 Identities=21% Similarity=0.248 Sum_probs=207.5
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC---CChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW---PDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 137 (497)
++.+.+.+|.|+|++|++|+.+ +++.||||++.+.-. ...+-+.+|-.+|.+| .||.|++|+..|++...+|+|+
T Consensus 74 DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvL 153 (604)
T KOG0592|consen 74 DFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVL 153 (604)
T ss_pred hcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEE
Confidence 4456666799999999999965 499999999975422 2234477888899999 7999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC----
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD---- 213 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 213 (497)
||+++|.|.++|.+ .+.|++...+.++.+|+.||+|||++| ||||||||+|||+|.+|++||+|||-|+....
T Consensus 154 e~A~nGdll~~i~K--~Gsfde~caR~YAAeIldAleylH~~G-IIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~ 230 (604)
T KOG0592|consen 154 EYAPNGDLLDLIKK--YGSFDETCARFYAAEILDALEYLHSNG-IIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKS 230 (604)
T ss_pred EecCCCcHHHHHHH--hCcchHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeEcCCCcEEEeeccccccCChhhcc
Confidence 99999999999976 689999999999999999999999999 99999999999999999999999999885432
Q ss_pred -----------C--CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCC
Q 010932 214 -----------G--KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEG 280 (497)
Q Consensus 214 -----------~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (497)
. .+++||..|.+||++.....+..+|||+|||+||.|+.|.+||-..+.-.+... ++. +.-
T Consensus 231 ~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqk----I~~--l~y 304 (604)
T KOG0592|consen 231 QENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQK----IQA--LDY 304 (604)
T ss_pred ccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHH----HHH--hcc
Confidence 1 347899999999999999999999999999999999999998866543332222 111 123
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 281 QYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 281 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+|+..++.+.+|+.+.|..||.+|+|..+|-+|
T Consensus 305 ~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 305 EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred cCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 5667777889999999999999999999998886
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-45 Score=357.47 Aligned_cols=245 Identities=21% Similarity=0.234 Sum_probs=208.9
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCC----CC-CChhHHHHHHHHhccCC-CCcceeeeeeeeeCCce
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQ----SW-PDPHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDER 133 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~----~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~ 133 (497)
...+.+.+.||+|+||+|+.|.+. +|+.||||++... .. ...+.+.+|+.+++.++ ||||++++.++......
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~ 95 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI 95 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence 356788888999999999999865 5899999987654 21 22456778999999998 99999999999999999
Q ss_pred EEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC-CCeeEcccCCccccC
Q 010932 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED-GDPRLSSFGLMKNSR 212 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~ 212 (497)
++||||+.||.|.+++.. .+++.+..+..+++|++.|+.|||++| |+||||||+|||++.+ +++||+|||++....
T Consensus 96 ~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~g-i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 96 YIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRG-IVHRDLKPENILLDGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred EEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence 999999999999999976 688999999999999999999999999 9999999999999999 999999999999772
Q ss_pred ----CCCccccCCCCCCccccccCC-CC-cccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHH
Q 010932 213 ----DGKSYSTNLAYTPPEFLRTGR-VI-PESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANED 286 (497)
Q Consensus 213 ----~~~~~~gt~~y~aPE~~~~~~-~~-~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (497)
...+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||.......+... +... ...+|...
T Consensus 173 ~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~k----i~~~--~~~~p~~~ 246 (370)
T KOG0583|consen 173 GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRK----IRKG--EFKIPSYL 246 (370)
T ss_pred CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHH----HhcC--CccCCCCc
Confidence 235789999999999999877 85 689999999999999999999976443333222 1111 12344445
Q ss_pred -HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 287 -ATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 287 -~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+.++..|+.+||..||.+|+|+.+++.+
T Consensus 247 ~S~~~~~Li~~mL~~~P~~R~t~~~i~~h 275 (370)
T KOG0583|consen 247 LSPEARSLIEKMLVPDPSTRITLLEILEH 275 (370)
T ss_pred CCHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence 8899999999999999999999999943
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-45 Score=343.06 Aligned_cols=254 Identities=20% Similarity=0.247 Sum_probs=207.5
Q ss_pred CCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
+-+.|.+...||.|..++||+|+.. .++.||||++.-... .+.+.+.+|++.|+.++||||+.++..|..+..+|+||
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 3456778888899999999999954 589999999975432 33688999999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 214 (497)
.||.+||+.+++...-...+++..+..|++++++||.|||.+| .||||||+.||||+.+|.|||+|||.+-..-..
T Consensus 104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G-~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R 182 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG-HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDR 182 (516)
T ss_pred hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC-ceecccccccEEEcCCCcEEEcCceeeeeecccCce
Confidence 9999999999998776778999999999999999999999999 999999999999999999999999976532211
Q ss_pred -----CccccCCCCCCcccccc--CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHh----ccccccccccccCCCCC
Q 010932 215 -----KSYSTNLAYTPPEFLRT--GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIR----GKNLLLLMDSSLEGQYA 283 (497)
Q Consensus 215 -----~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 283 (497)
.++.||++|||||++.. ..|+.|+||||||++..||.+|..||.....-.+. .+............+-.
T Consensus 183 ~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~ 262 (516)
T KOG0582|consen 183 QVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDED 262 (516)
T ss_pred eeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHh
Confidence 45688999999999643 56999999999999999999999987543211111 11111111111111122
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 284 NEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 284 ~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
...+..+.+++..||++||.+|||+++++++
T Consensus 263 k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 263 KKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred hhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 3456689999999999999999999999985
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-45 Score=321.43 Aligned_cols=249 Identities=20% Similarity=0.241 Sum_probs=203.7
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
.|..++++|+|.||+||+|++. +|+.||||.++.....+ .....+|++.|+.++|+||+.++++|.+.+.+.||+||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 4667788899999999999964 59999999998664433 34689999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC----
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK---- 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 215 (497)
++ .+|...++. +...++...+..++.++++||+|||++. |+||||||.|+|++.+|.+||+|||+++......
T Consensus 83 m~-tdLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~~-IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~ 159 (318)
T KOG0659|consen 83 MP-TDLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSKW-ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQT 159 (318)
T ss_pred cc-ccHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhhh-hhcccCCccceEEcCCCcEEeecccchhccCCCCcccc
Confidence 96 679999865 4678999999999999999999999999 9999999999999999999999999999765442
Q ss_pred ccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc--------------ccccc-------
Q 010932 216 SYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK--------------NLLLL------- 273 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~--------------~~~~~------- 273 (497)
..+.|.+|+|||.+.| ..|+...|+||.||++.||+-|.+.|++...-..... .+..+
T Consensus 160 ~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~ 239 (318)
T KOG0659|consen 160 HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ 239 (318)
T ss_pred cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHh
Confidence 2357899999999886 5699999999999999999999977766421111000 00000
Q ss_pred -cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 274 -MDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 274 -~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.........-+.++.++.+|+.++|..||.+|+|+.+++++
T Consensus 240 ~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 240 QFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 11111111223456778999999999999999999999986
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-45 Score=354.11 Aligned_cols=242 Identities=20% Similarity=0.282 Sum_probs=210.2
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
.|.+...+|+|+||+||+|+.+ +.+.||+|.+.+..... .+.+.+|+++++.++|||||.++++|.+..++|+|+||
T Consensus 3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~ 82 (808)
T KOG0597|consen 3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEY 82 (808)
T ss_pred chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehh
Confidence 3566677799999999999976 48999999998765543 56799999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC----
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK---- 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 215 (497)
+.| +|..+|.. .+.++++.+..++.+++.||.|||+.+ |+|||+||.|||++..|.+|+||||+|+.....+
T Consensus 83 a~g-~L~~il~~--d~~lpEe~v~~~a~~LVsaL~yLhs~r-ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vlt 158 (808)
T KOG0597|consen 83 AVG-DLFTILEQ--DGKLPEEQVRAIAYDLVSALYYLHSNR-ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLT 158 (808)
T ss_pred hhh-hHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhcC-cccccCCcceeeecCCCceeechhhhhhhcccCceeee
Confidence 976 99999975 789999999999999999999999999 9999999999999999999999999999776653
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
+..|||.|||||...++.|+..+|.||+||++||+++|++||........... +... ...+|...+..+..|+.
T Consensus 159 sikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~----I~~d--~v~~p~~~S~~f~nfl~ 232 (808)
T KOG0597|consen 159 SIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKS----ILKD--PVKPPSTASSSFVNFLQ 232 (808)
T ss_pred eccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHH----HhcC--CCCCcccccHHHHHHHH
Confidence 46799999999999999999999999999999999999998865433222111 1111 11345678889999999
Q ss_pred HhcccCCCCCCCHHHHHHH
Q 010932 296 KCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~ 314 (497)
..|.+||..|.|..+++.|
T Consensus 233 gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 233 GLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred HHhhcChhhcccHHHHhcC
Confidence 9999999999999999986
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-45 Score=350.21 Aligned_cols=249 Identities=18% Similarity=0.185 Sum_probs=205.8
Q ss_pred CCCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCC---ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWP---DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
..+++.++..||+|+||.||+|+-++ |..+|+|+++++... ..+.+..|-.+|....+|+||+++..|++.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 45677888999999999999999765 999999999876443 34568899999999999999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC--
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD-- 213 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 213 (497)
||||++||++..+|.. .+.|++..++.++.+++.|+.-+|..| +|||||||+|+|||..|++||+||||+.....
T Consensus 219 iMEylPGGD~mTLL~~--~~~L~e~~arfYiaE~vlAI~~iH~~g-yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~ 295 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMR--KDTLTEDWARFYIAETVLAIESIHQLG-YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKH 295 (550)
T ss_pred EEEecCCccHHHHHHh--cCcCchHHHHHHHHHHHHHHHHHHHcC-cccccCChhheeecCCCCEeeccccccchhhhhh
Confidence 9999999999999976 789999999999999999999999999 99999999999999999999999999852100
Q ss_pred -----------------------C-----C---------------------ccccCCCCCCccccccCCCCcccceeehh
Q 010932 214 -----------------------G-----K---------------------SYSTNLAYTPPEFLRTGRVIPESVIYSYG 244 (497)
Q Consensus 214 -----------------------~-----~---------------------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG 244 (497)
. . +.+|||.|||||++.+..|+..+|+||||
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG 375 (550)
T KOG0605|consen 296 RIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLG 375 (550)
T ss_pred hhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHH
Confidence 0 0 24589999999999999999999999999
Q ss_pred hhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC---HHHHHHH
Q 010932 245 TVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPD---VKFLLSA 314 (497)
Q Consensus 245 ~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~ll~~ 314 (497)
||+||||.|-+||........-...+ . ....+..+.....+.++.+||.+||. ||++|.. ++||-+|
T Consensus 376 ~ImyEmLvGyPPF~s~tp~~T~rkI~-n-wr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~H 445 (550)
T KOG0605|consen 376 CIMYEMLVGYPPFCSETPQETYRKIV-N-WRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKH 445 (550)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHH-H-HhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcC
Confidence 99999999999987664443322211 1 11112222223456889999999999 9999975 5555543
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-44 Score=345.62 Aligned_cols=250 Identities=21% Similarity=0.243 Sum_probs=199.4
Q ss_pred CcccccccCCCCCCcEEEEEEE-cCCcEEEEEEccCCC--CCChhHHHHHHHHhccCCCCcceeeeeeeeeC--CceEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRL-KNNRLVAIKRFSRQS--WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG--DERLLV 136 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv 136 (497)
+.+..+.+||+|+||.||+++. .+|+.||+|.+.... ........+||.+|++|.||||++|.+..... ..+|||
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 3567788999999999999996 469999999987554 33356678999999999999999999999876 689999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 214 (497)
+|||++ +|..++.. ..-.|++.++..++.|++.||.|||++| |+|||||.+|||||++|.+||+|||||+.....
T Consensus 197 FeYMdh-DL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~g-vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~ 273 (560)
T KOG0600|consen 197 FEYMDH-DLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSRG-VLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGS 273 (560)
T ss_pred Eecccc-hhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhcC-eeeccccccceEEcCCCCEEeccccceeeccCCCC
Confidence 999975 57777743 3558999999999999999999999999 999999999999999999999999999965443
Q ss_pred ---CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHH----------------Hhcccccccc
Q 010932 215 ---KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDV----------------IRGKNLLLLM 274 (497)
Q Consensus 215 ---~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~----------------~~~~~~~~~~ 274 (497)
+..+.|.+|+|||.+.+ ..|+...|+||.||||.||++|++++++...-. |....+....
T Consensus 274 ~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~ 353 (560)
T KOG0600|consen 274 APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHAT 353 (560)
T ss_pred cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCccc
Confidence 23456899999999997 469999999999999999999998876542110 1000000000
Q ss_pred ccccCCCC-------CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 275 DSSLEGQY-------ANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 275 ~~~~~~~~-------~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.......+ -...+....+|+..+|..||.+|.|+.++|..
T Consensus 354 ~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 354 IFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred ccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 00000011 12346678999999999999999999999874
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-44 Score=356.34 Aligned_cols=239 Identities=18% Similarity=0.282 Sum_probs=206.9
Q ss_pred CCCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCC---CChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSW---PDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 134 (497)
+..+.++++.||+|+||+|+++..+. ++.+|||++++... .+.+..+.|.+++... +||.++.++..|++.++++
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 44566888999999999999999875 89999999987643 3456778888888777 5999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC--
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR-- 212 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~-- 212 (497)
+||||+.||++..+.+ ...|++..+.-++..|+.||.|||++| ||+||||.+|||+|.+|.+||+|||+++...
T Consensus 446 fvmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH~~~-IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~ 521 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLHENG-IIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ 521 (694)
T ss_pred EEEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHHhcC-ceeeecchhheEEcccCcEEecccccccccCCC
Confidence 9999999999655542 578999999999999999999999999 9999999999999999999999999999643
Q ss_pred --CCCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHH
Q 010932 213 --DGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290 (497)
Q Consensus 213 --~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (497)
...+++|||.|||||++.+..|+..+|+|||||+|||||.|..||+++..+.+....+. . ...+|..++.+.
T Consensus 522 g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~----d--~~~yP~~ls~ea 595 (694)
T KOG0694|consen 522 GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVN----D--EVRYPRFLSKEA 595 (694)
T ss_pred CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhc----C--CCCCCCcccHHH
Confidence 33578999999999999999999999999999999999999999987765554333211 1 224677789999
Q ss_pred HHHHHHhcccCCCCCCCH
Q 010932 291 VELASKCLQYEAKDRPDV 308 (497)
Q Consensus 291 ~~li~~cl~~dp~~Rps~ 308 (497)
.++++++|.+||++|..+
T Consensus 596 ~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 596 IAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HHHHHHHhccCcccccCC
Confidence 999999999999999854
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-45 Score=352.50 Aligned_cols=249 Identities=22% Similarity=0.366 Sum_probs=206.6
Q ss_pred CcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
.+..+..+||+|+||+||+|.|. ..||||++....... .+.|++|+..|++-||.||+-+.|+|..+.. .||+.+
T Consensus 392 ~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqw 468 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQW 468 (678)
T ss_pred HHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehh
Confidence 34456678899999999999985 349999998665443 5689999999999999999999999998877 999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC------
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD------ 213 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------ 213 (497)
|+|.+|..+|+.. ...|.....+.|++||++|+.|||.++ |||||||..||++.++++|||+|||++....-
T Consensus 469 CeGsSLY~hlHv~-etkfdm~~~idIAqQiaqGM~YLHAK~-IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q 546 (678)
T KOG0193|consen 469 CEGSSLYTHLHVQ-ETKFDMNTTIDIAQQIAQGMDYLHAKN-IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQ 546 (678)
T ss_pred ccCchhhhhccch-hhhhhHHHHHHHHHHHHHhhhhhhhhh-hhhhhccccceEEccCCcEEEecccceeeeeeeccccc
Confidence 9999999999764 578999999999999999999999999 99999999999999999999999999864321
Q ss_pred CCccccCCCCCCcccccc---CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccC----CCCCHHH
Q 010932 214 GKSYSTNLAYTPPEFLRT---GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLE----GQYANED 286 (497)
Q Consensus 214 ~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 286 (497)
.....|...|||||+++. .+|++.+||||||||+|||+||..|+.....+. +.-.+..... ......+
T Consensus 547 ~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq-----IifmVGrG~l~pd~s~~~s~~ 621 (678)
T KOG0193|consen 547 LEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ-----IIFMVGRGYLMPDLSKIRSNC 621 (678)
T ss_pred cCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh-----eEEEecccccCccchhhhccC
Confidence 123456788999999974 468999999999999999999998886433222 2222222211 1123457
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 287 ATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 287 ~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
+.++.+|+..||..++++||++.+|+..|+.+..
T Consensus 622 pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 622 PKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred HHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 8899999999999999999999999998877764
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-44 Score=353.86 Aligned_cols=246 Identities=20% Similarity=0.267 Sum_probs=214.6
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC---CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW---PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
...+++.+.||.|+.|.|-+|++. +|+.+|||++.+... .....+.+|+-+|+-+.||||+++++++.+..++|+|
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 456777788999999999999975 599999999976522 2245689999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 214 (497)
.||++||-|.+++.. .+++++..+.+++.||+.|+.|||..+ |+||||||+|+|+|..+++||+|||+|.....+
T Consensus 91 lEyv~gGELFdylv~--kG~l~e~eaa~ff~QIi~gv~yCH~~~-icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gkl 167 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVR--KGPLPEREAAHFFRQILDGVSYCHAFN-ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKL 167 (786)
T ss_pred EEecCCchhHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHhhhc-ceeccCCchhhhhhcccCEeeeccceeecccCCcc
Confidence 999999999999976 789999999999999999999999999 999999999999999999999999999876655
Q ss_pred -CccccCCCCCCccccccCCC-CcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 215 -KSYSTNLAYTPPEFLRTGRV-IPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
.+.+|+|.|.|||++.+.+| ..++||||+|||||-||||+.||.+++...+... +... .-+.|...+.++++
T Consensus 168 LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlK-----V~~G-~f~MPs~Is~eaQd 241 (786)
T KOG0588|consen 168 LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLK-----VQRG-VFEMPSNISSEAQD 241 (786)
T ss_pred ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHH-----HHcC-cccCCCcCCHHHHH
Confidence 46899999999999999998 5689999999999999999999976654433222 1111 12456778889999
Q ss_pred HHHHhcccCCCCCCCHHHHHHHh
Q 010932 293 LASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~l 315 (497)
|+.+||..||++|.|+++|++|-
T Consensus 242 LLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 242 LLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred HHHHHhccCccccccHHHHhhCc
Confidence 99999999999999999999974
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-45 Score=344.78 Aligned_cols=242 Identities=19% Similarity=0.274 Sum_probs=209.3
Q ss_pred cccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCC
Q 010932 65 LIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 142 (497)
..+..+|+|+||.||+|.+. .++.||||++.-.... ..+.+.+|+.+|.+++++||.++|+.+..+..++++||||.|
T Consensus 16 ~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~g 95 (467)
T KOG0201|consen 16 TKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGG 95 (467)
T ss_pred ccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcC
Confidence 44466799999999999975 5999999999865433 367899999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----Cccc
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KSYS 218 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~ 218 (497)
|++.+.+.. ++.+.+..+.-|+++++.||.|||.++ .+|||||+.|||+..+|.+||+|||.+...... .++.
T Consensus 96 Gsv~~lL~~--~~~~~E~~i~~ilre~l~~l~ylH~~~-kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfv 172 (467)
T KOG0201|consen 96 GSVLDLLKS--GNILDEFEIAVILREVLKGLDYLHSEK-KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFV 172 (467)
T ss_pred cchhhhhcc--CCCCccceeeeehHHHHHHhhhhhhcc-eecccccccceeEeccCcEEEEecceeeeeechhhcccccc
Confidence 999999864 455688899999999999999999999 999999999999999999999999998755433 5789
Q ss_pred cCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhc
Q 010932 219 TNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCL 298 (497)
Q Consensus 219 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 298 (497)
|||.|||||++....|+.|+||||||++.+||++|.+|+... .......++.....+.....+++.+++|+..||
T Consensus 173 GTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~-----hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~CL 247 (467)
T KOG0201|consen 173 GTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKL-----HPMRVLFLIPKSAPPRLDGDFSPPFKEFVEACL 247 (467)
T ss_pred ccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCccc-----CcceEEEeccCCCCCccccccCHHHHHHHHHHh
Confidence 999999999999889999999999999999999999776432 123334445554455555578888999999999
Q ss_pred ccCCCCCCCHHHHHHH
Q 010932 299 QYEAKDRPDVKFLLSA 314 (497)
Q Consensus 299 ~~dp~~Rps~~~ll~~ 314 (497)
.+||+.|||+.++|++
T Consensus 248 ~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 248 DKNPEFRPSAKELLKH 263 (467)
T ss_pred hcCcccCcCHHHHhhh
Confidence 9999999999999986
|
|
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-43 Score=370.47 Aligned_cols=426 Identities=16% Similarity=0.141 Sum_probs=287.5
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC---hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
..+.+++.||+|+||.||+|.+. +|+.||||++....... .+++.+|+++++.++||||+++++++.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 45678889999999999999976 48999999997543222 357899999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCC---------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCc
Q 010932 138 QYMPNDTLSKHLFHWD---------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLM 208 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~---------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 208 (497)
||++|++|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.++|+|||++
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G-IIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG-VLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchheEEEcCCCCEEEEecCcc
Confidence 9999999999885311 234567788999999999999999999 999999999999999999999999998
Q ss_pred cccCC----------------------CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHh
Q 010932 209 KNSRD----------------------GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIR 266 (497)
Q Consensus 209 ~~~~~----------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~ 266 (497)
+.... .....||+.|+|||++.+..++.++|||||||++|||+||+.||.........
T Consensus 161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~ 240 (932)
T PRK13184 161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS 240 (932)
T ss_pred eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh
Confidence 75411 01245899999999999999999999999999999999999887543221111
Q ss_pred ccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHhhhhhccccc--hh-----------------
Q 010932 267 GKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP-DVKFLLSAVAPLQKQTEV--AS----------------- 326 (497)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-s~~~ll~~l~~~~~~~~~--~~----------------- 326 (497)
.. .....+... ......++.+.+++.+||+.||++|| +++++++.|+........ +.
T Consensus 241 ~~--~~i~~P~~~-~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~w~~~~~l~~~~~~~wk~~e~i 317 (932)
T PRK13184 241 YR--DVILSPIEV-APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPEWTVKATLMTKKKSCWKFYEPI 317 (932)
T ss_pred hh--hhccChhhc-cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCcccccccccccccchhccccchh
Confidence 11 001111000 01123566789999999999999996 667777777766432110 00
Q ss_pred ---hhhccCCCCCcc-CCccC---------------------------CcchhhhhccchhHHHHHH-------------
Q 010932 327 ---HVLMGLSKAPVV-LPTML---------------------------SSLGKACARMDLTAVHDIL------------- 362 (497)
Q Consensus 327 ---~~~~~~~~~~~~-~p~~~---------------------------~~~~~~~~~~~~~~~~~~~------------- 362 (497)
...+.....|.. ..... .++.....+.+.......|
T Consensus 318 Llsk~~~~l~~s~~~w~s~~is~ie~~~~~rie~~~~~~~~~~~~g~~l~p~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 397 (932)
T PRK13184 318 LLSKYFPMLESSPAQWYSLMISKIESSSETRLEYTVTKKGLHEGFGILLPPSEEAERGDFYCGYGLWLHIKNNELSVSLV 397 (932)
T ss_pred hhhhhcccccCCchhheeccccccccccceeeeeeeccCccccccceecCcccccccCccccccceeeecccccceeeee
Confidence 000000000000 00000 0000000000000000000
Q ss_pred -------HHhccccccccchhhhhhH----HHHHH-----------------------HHHHHH----------------
Q 010932 363 -------LKTGYKDEEGAENELSFQE----WTQQV-----------------------QDMLNT---------------- 392 (497)
Q Consensus 363 -------~~~g~~~~~~~~~e~a~~~----~~~~~-----------------------~~~~~~---------------- 392 (497)
...+........+.-+++. ...-+ ++++..
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (932)
T PRK13184 398 KNGLEIQKKSQEIISQQETFAIAIEKSNHRISLFVDQTLWIIHIDYLPSRGGRIGIIIQDLQDIMSNIAIFESSGALRVS 477 (932)
T ss_pred cccceeecCCcccccccceeeEEEEEecchhhhhcccceEEEeeeccccCCceEEEEEecchhhccceEEEEecCceeee
Confidence 0000000111111111111 11000 111111
Q ss_pred -HHHHhHHhhcccHHHHHHHHHHHhhcCCCCc---HHHHHHHHHHHHhhh-------cHHHHHHHHHHHHHhCCCChHHH
Q 010932 393 -KKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS---GTVFVRRALSYLMIE-------QAELALRDAMQAQVCLPEWPTAF 461 (497)
Q Consensus 393 -~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~---~~~~~~~g~~~~~~~-------~~~~A~~~~~~al~l~p~~~~a~ 461 (497)
..-.+++...+.|++|+..|++.-. --|.- .+|.|..|.++..+- .+++|+..|++. .-.|.-|--|
T Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 555 (932)
T PRK13184 478 CLAVPDAFLAEKLYDQALIFYRRIRE-SFPGRKEGYEAQFRLGITLLEKASEQGDPRDFTQALSEFSYL-HGGVGAPLEY 555 (932)
T ss_pred cccCcHHHHhhHHHHHHHHHHHHHhh-cCCCcccchHHHHHhhHHHHHHHHhcCChHHHHHHHHHHHHh-cCCCCCchHH
Confidence 1234567788999999999999988 66654 678899999887753 466666666653 3357777889
Q ss_pred HHHHHHHHHCCChHHHHHHHHHhhcCcccccc
Q 010932 462 YMQALALNKLGMETDAQDMLNDGASFEAKKQN 493 (497)
Q Consensus 462 ~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~ 493 (497)
..+|.+|..+|+|+|-+++|.-|++--|..+.
T Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (932)
T PRK13184 556 LGKALVYQRLGEYNEEIKSLLLALKRYSQHPE 587 (932)
T ss_pred HhHHHHHHHhhhHHHHHHHHHHHHHhcCCCCc
Confidence 99999999999999999999999988877654
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-43 Score=338.79 Aligned_cols=243 Identities=18% Similarity=0.255 Sum_probs=202.6
Q ss_pred CCCCCCcEEEEEEEcCCcEEEEEEccCCCCCC---hhHHHHHHHHhccCCCCcceeeeeeeee----CCceEEEEEcCCC
Q 010932 70 SGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHKRLVNLIGCCAE----GDERLLVAQYMPN 142 (497)
Q Consensus 70 lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~ 142 (497)
+|+|++|.||+|.+ +|+.||||+++...... .+.|.+|+.+|++++||||++++|++.+ ....++||||+++
T Consensus 28 i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~ 106 (283)
T PHA02988 28 IKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTR 106 (283)
T ss_pred EeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCC
Confidence 58999999999998 68999999997654333 4678899999999999999999999877 3468999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCcccccCCCcceEeCCCCCeeEcccCCccccCCC-CccccC
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQ-NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-KSYSTN 220 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~gt 220 (497)
|+|.+++.. ...+++.....++.+++.||.|||+. + ++||||||+|||++.++.+||+|||+++..... ....+|
T Consensus 107 g~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~-~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~ 183 (283)
T PHA02988 107 GYLREVLDK--EKDLSFKTKLDMAIDCCKGLYNLYKYTN-KPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNF 183 (283)
T ss_pred CcHHHHHhh--CCCCChhHHHHHHHHHHHHHHHHHhcCC-CCCCcCChhhEEECCCCcEEEcccchHhhhccccccccCc
Confidence 999999975 46789999999999999999999985 6 899999999999999999999999998864433 345678
Q ss_pred CCCCCcccccc--CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhc
Q 010932 221 LAYTPPEFLRT--GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCL 298 (497)
Q Consensus 221 ~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 298 (497)
+.|+|||++.+ ..++.++|||||||++|||++|+.||.......+.. .+.........+..++..+.+|+.+||
T Consensus 184 ~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~----~i~~~~~~~~~~~~~~~~l~~li~~cl 259 (283)
T PHA02988 184 MVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYD----LIINKNNSLKLPLDCPLEIKCIVEACT 259 (283)
T ss_pred ccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHH----HHHhcCCCCCCCCcCcHHHHHHHHHHh
Confidence 99999999976 678999999999999999999999886543222211 111112222344457788999999999
Q ss_pred ccCCCCCCCHHHHHHHhhhhhc
Q 010932 299 QYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 299 ~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
+.||++|||+.++++.|+.++.
T Consensus 260 ~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 260 SHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred cCCcccCcCHHHHHHHHHHHHh
Confidence 9999999999999999988753
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-44 Score=353.06 Aligned_cols=253 Identities=19% Similarity=0.302 Sum_probs=201.9
Q ss_pred cccccccCCCCCCcEEEEEEEc------CCcEEEEEEccCCCCC-ChhHHHHHHHHhccC-CCCcceeeeeeeeeC-Cce
Q 010932 63 SELIVSESGDKAPNVVYRGRLK------NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNV-RHKRLVNLIGCCAEG-DER 133 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~-~~~ 133 (497)
.+.+.+.||+|+||.||+|.+. +++.||||++...... ....+.+|+.+|..+ +||||+++++++... ...
T Consensus 8 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 87 (338)
T cd05102 8 RLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPL 87 (338)
T ss_pred HceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCce
Confidence 4577888999999999999741 2578999999754322 245789999999999 899999999988764 458
Q ss_pred EEEEEcCCCCChhhhhhcCC------------------------------------------------------------
Q 010932 134 LLVAQYMPNDTLSKHLFHWD------------------------------------------------------------ 153 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~------------------------------------------------------------ 153 (497)
++||||+++|+|.+++....
T Consensus 88 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (338)
T cd05102 88 MVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLW 167 (338)
T ss_pred EEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccc
Confidence 89999999999999886421
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC------CccccCCCCCCcc
Q 010932 154 KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG------KSYSTNLAYTPPE 227 (497)
Q Consensus 154 ~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------~~~~gt~~y~aPE 227 (497)
...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++..... ....+++.|+|||
T Consensus 168 ~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE 246 (338)
T cd05102 168 KSPLTMEDLICYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPE 246 (338)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcH
Confidence 134788899999999999999999999 999999999999999999999999999754322 1233467899999
Q ss_pred ccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 010932 228 FLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306 (497)
Q Consensus 228 ~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 306 (497)
++.+..++.++|||||||+||||++ |..||........ ....+........+...++.+.+|+.+||+.||++||
T Consensus 247 ~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RP 322 (338)
T cd05102 247 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE----FCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERP 322 (338)
T ss_pred HhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH----HHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCc
Confidence 9998899999999999999999997 8887765321111 0011111112223445677899999999999999999
Q ss_pred CHHHHHHHhhhhhc
Q 010932 307 DVKFLLSAVAPLQK 320 (497)
Q Consensus 307 s~~~ll~~l~~~~~ 320 (497)
|+.++++.|+.+..
T Consensus 323 s~~el~~~l~~~~~ 336 (338)
T cd05102 323 TFSALVEILGDLLQ 336 (338)
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999988754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-45 Score=367.70 Aligned_cols=255 Identities=24% Similarity=0.344 Sum_probs=214.2
Q ss_pred cccccccCCCCCCcEEEEEEEcC------CcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
...++++||+|+||+||+|...+ ...||||.++..... .+++|.+|+++|..++|||||+++|+|..++..+|
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~M 566 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCM 566 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEE
Confidence 34566889999999999998532 458999999877655 46789999999999999999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEc
Q 010932 136 VAQYMPNDTLSKHLFHWD------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLS 203 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~ 203 (497)
|+|||..|+|.+||..+. .++|+..+.+.|+.||+.|+.||-++. +|||||-..|+||.++..|||+
T Consensus 567 vFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~-FVHRDLATRNCLVge~l~VKIs 645 (774)
T KOG1026|consen 567 VFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH-FVHRDLATRNCLVGENLVVKIS 645 (774)
T ss_pred EEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc-ccccchhhhhceeccceEEEec
Confidence 999999999999997431 234889999999999999999999998 9999999999999999999999
Q ss_pred ccCCccccCCCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhcccccccccc
Q 010932 204 SFGLMKNSRDGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDS 276 (497)
Q Consensus 204 Dfgla~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~ 276 (497)
|||+++..-... ...-.++|||||.|..++||.+||||||||||||+++ |+.|..+...+. +.+.+..
T Consensus 646 DfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E-----VIe~i~~ 720 (774)
T KOG1026|consen 646 DFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE-----VIECIRA 720 (774)
T ss_pred ccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH-----HHHHHHc
Confidence 999999654432 1222578999999999999999999999999999998 555554432222 2222222
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcccc
Q 010932 277 SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323 (497)
Q Consensus 277 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~ 323 (497)
+.....|..+|.++.+|+..||+.+|.+|||++||-..|+.+....+
T Consensus 721 g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 721 GQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP 767 (774)
T ss_pred CCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence 22356788899999999999999999999999999999998875544
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-44 Score=337.60 Aligned_cols=251 Identities=20% Similarity=0.207 Sum_probs=204.1
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--------------ChhHHHHHHHHhccCCCCcceeeee
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--------------DPHQFVTEAAGLGNVRHKRLVNLIG 125 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--------------~~~~~~~e~~~l~~l~h~niv~~~~ 125 (497)
...|.++++||+|.||+|-+|+.. +++.||||++.+.... ..+.+.+||.+|++++|||||+|+.
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE 175 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE 175 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence 456788899999999999999965 5999999999653211 1357899999999999999999999
Q ss_pred eeeeC--CceEEEEEcCCCCChhhhhhcCCCCC-CCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeE
Q 010932 126 CCAEG--DERLLVAQYMPNDTLSKHLFHWDKQP-LPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRL 202 (497)
Q Consensus 126 ~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~-l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl 202 (497)
+..+. +.+|||+|||..|.+...- .... ++..++++|+++++.||+|||.+| ||||||||+|+||+.+|+|||
T Consensus 176 vLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Qg-iiHRDIKPsNLLl~~~g~VKI 251 (576)
T KOG0585|consen 176 VLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQG-IIHRDIKPSNLLLSSDGTVKI 251 (576)
T ss_pred eecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEEcCCCcEEe
Confidence 99775 5799999999988764322 2344 999999999999999999999999 999999999999999999999
Q ss_pred cccCCccccCCC---------CccccCCCCCCccccccCC----CCcccceeehhhhHHHHhhCCCCCCchhhHHHhccc
Q 010932 203 SSFGLMKNSRDG---------KSYSTNLAYTPPEFLRTGR----VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKN 269 (497)
Q Consensus 203 ~Dfgla~~~~~~---------~~~~gt~~y~aPE~~~~~~----~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~ 269 (497)
+|||.+.....+ ....|||.|||||.+.++. .+.+.||||+||+||.|+.|+.||.....-.....
T Consensus 252 sDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~K- 330 (576)
T KOG0585|consen 252 SDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDK- 330 (576)
T ss_pred eccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHH-
Confidence 999998754222 2467999999999998743 35689999999999999999999976543333222
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 270 LLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
++...+.-+..+...+.+.+||.++|.+||+.|.+..+|..|.....
T Consensus 331 ---Ivn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~ 377 (576)
T KOG0585|consen 331 ---IVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTR 377 (576)
T ss_pred ---HhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceecc
Confidence 33333322233456788999999999999999999999998865544
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-44 Score=343.75 Aligned_cols=244 Identities=18% Similarity=0.183 Sum_probs=205.0
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC---CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW---PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
.+.+++.||+|+||+||++... +|+.||||++..... ...+.+.+|+.+++.++||||+++++++.+....++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME 81 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence 4567788999999999999976 589999999865322 234568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-Ccc
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-KSY 217 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~ 217 (497)
|+++++|.+++.. .+.+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ...
T Consensus 82 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (291)
T cd05612 82 YVPGGELFSYLRN--SGRFSNSTGLFYASEIVCALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTL 158 (291)
T ss_pred CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEEecCcchhccCCcccc
Confidence 9999999999865 567999999999999999999999999 999999999999999999999999998865433 345
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHh
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKC 297 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 297 (497)
.||+.|+|||++.+..++.++|||||||++|+|++|+.||........... +... ...++...+..+.+|+.+|
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~----i~~~--~~~~~~~~~~~~~~li~~~ 232 (291)
T cd05612 159 CGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEK----ILAG--KLEFPRHLDLYAKDLIKKL 232 (291)
T ss_pred cCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HHhC--CcCCCccCCHHHHHHHHHH
Confidence 789999999999988899999999999999999999998865432221111 1111 1233445577899999999
Q ss_pred cccCCCCCCC-----HHHHHHHh
Q 010932 298 LQYEAKDRPD-----VKFLLSAV 315 (497)
Q Consensus 298 l~~dp~~Rps-----~~~ll~~l 315 (497)
|+.||.+||+ +.+++++-
T Consensus 233 l~~dp~~R~~~~~~~~~~~l~h~ 255 (291)
T cd05612 233 LVVDRTRRLGNMKNGADDVKNHR 255 (291)
T ss_pred cCCCHHHccCCccCCHHHHhcCc
Confidence 9999999995 89998873
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-43 Score=340.33 Aligned_cols=247 Identities=16% Similarity=0.219 Sum_probs=202.5
Q ss_pred cccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC---ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 65 LIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP---DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
.+++.||+|+||+||++.+. +|+.||||++...... ....+.+|+.+++.++|+||+.+++++.+.+..++||||+
T Consensus 3 ~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~ 82 (285)
T cd05631 3 RHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIM 82 (285)
T ss_pred eEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEec
Confidence 45677899999999999975 5999999998654322 2346889999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---Ccc
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---KSY 217 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~ 217 (497)
++|+|..++.......+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++|+|||++...... ...
T Consensus 83 ~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 161 (285)
T cd05631 83 NGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER-IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGR 161 (285)
T ss_pred CCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCC
Confidence 9999998886544557999999999999999999999999 999999999999999999999999999865432 235
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHh
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKC 297 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 297 (497)
.||+.|+|||++.+..++.++|||||||++|+|++|+.||........... ....+ ......++...+..+.+|+.+|
T Consensus 162 ~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~-~~~~~-~~~~~~~~~~~s~~~~~li~~~ 239 (285)
T cd05631 162 VGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREE-VDRRV-KEDQEEYSEKFSEDAKSICRML 239 (285)
T ss_pred CCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHH-HHHHh-hcccccCCccCCHHHHHHHHHH
Confidence 689999999999999999999999999999999999998864321111000 00000 0111234455677899999999
Q ss_pred cccCCCCCCC-----HHHHHHH
Q 010932 298 LQYEAKDRPD-----VKFLLSA 314 (497)
Q Consensus 298 l~~dp~~Rps-----~~~ll~~ 314 (497)
|+.||.+||| +++++++
T Consensus 240 l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 240 LTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred hhcCHHHhcCCCCCCHHHHhcC
Confidence 9999999997 7888875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=347.45 Aligned_cols=245 Identities=17% Similarity=0.208 Sum_probs=206.1
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC---CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
++++.+++.||+|+||.||+|.++ +|+.||||++.... ....+.+.+|+.+|+.++||||+++++++..++..++|
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 456788889999999999999986 48999999987532 22345789999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-C
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-K 215 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~ 215 (497)
|||+++++|.+++.. .+.+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... .
T Consensus 97 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 173 (329)
T PTZ00263 97 LEFVVGGELFTHLRK--AGRFPNDVAKFYHAELVLAFEYLHSKD-IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTF 173 (329)
T ss_pred EcCCCCChHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEECCCCCEEEeeccCceEcCCCcc
Confidence 999999999999865 567899999999999999999999999 999999999999999999999999999865433 3
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||.......... .+... ...++...+..+.+|+.
T Consensus 174 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~----~i~~~--~~~~p~~~~~~~~~li~ 247 (329)
T PTZ00263 174 TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYE----KILAG--RLKFPNWFDGRARDLVK 247 (329)
T ss_pred eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHH----HHhcC--CcCCCCCCCHHHHHHHH
Confidence 4678999999999998889999999999999999999999886543221111 11111 11234445677999999
Q ss_pred HhcccCCCCCCC-----HHHHHHH
Q 010932 296 KCLQYEAKDRPD-----VKFLLSA 314 (497)
Q Consensus 296 ~cl~~dp~~Rps-----~~~ll~~ 314 (497)
+||+.||.+||+ +.+++.+
T Consensus 248 ~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 248 GLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred HHhhcCHHHcCCCCCCCHHHHhcC
Confidence 999999999996 7888876
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-44 Score=343.11 Aligned_cols=247 Identities=19% Similarity=0.195 Sum_probs=217.8
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCc-eEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE-RLLVA 137 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~lv~ 137 (497)
+.|.+++.+|+|+||.+++++++. +..|++|.+.-..... ++...+|+.++++++|||||.+.+.|..++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 457788899999999999999864 8899999987544333 4568999999999999999999999999888 99999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 214 (497)
+||+||+|.+.|...++..++++.+..|+.|++.|+.|||++. |+|||||+.|||++.++.|+|+|||+|+.....
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~-iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~ 162 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR-VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSL 162 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh-hhcccchhhhhhccccCceeecchhhhhhcCCchhh
Confidence 9999999999998877788999999999999999999999887 999999999999999999999999999976654
Q ss_pred -CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHH
Q 010932 215 -KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVEL 293 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 293 (497)
.+..||+.||+||.+.+.+|+.|+|||||||++|||++-+++|...+............ ..+.|...+.++..+
T Consensus 163 a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~-----~~Plp~~ys~el~~l 237 (426)
T KOG0589|consen 163 ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL-----YSPLPSMYSSELRSL 237 (426)
T ss_pred hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc-----CCCCCccccHHHHHH
Confidence 36789999999999999999999999999999999999999887765555433322222 345677788999999
Q ss_pred HHHhcccCCCCCCCHHHHHHH
Q 010932 294 ASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 294 i~~cl~~dp~~Rps~~~ll~~ 314 (497)
+..||+.+|..||++.++|.+
T Consensus 238 v~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 238 VKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHHHhhcCCccCCCHHHHhhC
Confidence 999999999999999999987
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-43 Score=346.20 Aligned_cols=237 Identities=21% Similarity=0.237 Sum_probs=200.0
Q ss_pred cCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC---CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCC
Q 010932 69 ESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW---PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDT 144 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 144 (497)
.||+|+||+||++..+ +|+.||||+++.... .....+.+|+.+|+.++||||+++++++...+..++||||+++++
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~ 81 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence 4699999999999975 589999999975322 223568899999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC----CCccccC
Q 010932 145 LSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----GKSYSTN 220 (497)
Q Consensus 145 L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~gt 220 (497)
|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.... .....||
T Consensus 82 L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt 158 (323)
T cd05571 82 LFFHLSR--ERVFSEDRARFYGAEIVSALGYLHSCD-VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 158 (323)
T ss_pred HHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecC
Confidence 9998865 567899999999999999999999999 99999999999999999999999999875322 2345689
Q ss_pred CCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhccc
Q 010932 221 LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQY 300 (497)
Q Consensus 221 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 300 (497)
+.|+|||++.+..++.++|||||||++|||++|+.||............ ... ...++...+..+.+|+.+||+.
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~----~~~--~~~~p~~~~~~~~~li~~~L~~ 232 (323)
T cd05571 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI----LME--EIRFPRTLSPEAKSLLAGLLKK 232 (323)
T ss_pred ccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHH----HcC--CCCCCCCCCHHHHHHHHHHccC
Confidence 9999999999889999999999999999999999988654332221111 111 1234455678899999999999
Q ss_pred CCCCCC-----CHHHHHHH
Q 010932 301 EAKDRP-----DVKFLLSA 314 (497)
Q Consensus 301 dp~~Rp-----s~~~ll~~ 314 (497)
||++|| ++.+++++
T Consensus 233 dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 233 DPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CHHHcCCCCCCCHHHHHcC
Confidence 999999 89999876
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-44 Score=310.51 Aligned_cols=246 Identities=19% Similarity=0.240 Sum_probs=212.5
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC---CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW---PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
+.++.+.||.|-||.||.|+.+ ++-.||+|++.++.. ...+++.+|+++-+.|+||||++++++|.+....||++|
T Consensus 23 dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilE 102 (281)
T KOG0580|consen 23 DFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILE 102 (281)
T ss_pred hccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEE
Confidence 3466677899999999999965 588999999976432 235689999999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--Cc
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KS 216 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~ 216 (497)
|...|+|...|.......+++.....++.|++.||.|+|.++ ||||||||+|+|++..|.+||+|||.+...... .+
T Consensus 103 ya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~-VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~t 181 (281)
T KOG0580|consen 103 YAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKT 181 (281)
T ss_pred ecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC-cccCCCCHHHhccCCCCCeeccCCCceeecCCCCcee
Confidence 999999999998767788999999999999999999999999 999999999999999999999999998865433 56
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
.+||..|.+||...+...+...|+|++|++.||++.|.+||.....+..... +.. ..-.+|...+..+.++|.+
T Consensus 182 lcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkr----I~k--~~~~~p~~is~~a~dlI~~ 255 (281)
T KOG0580|consen 182 LCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKR----IRK--VDLKFPSTISGGAADLISR 255 (281)
T ss_pred eecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHH----HHH--ccccCCcccChhHHHHHHH
Confidence 8999999999999999999999999999999999999998865542222211 111 1223456678889999999
Q ss_pred hcccCCCCCCCHHHHHHHh
Q 010932 297 CLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~l 315 (497)
|+.++|.+|.+..+++.+=
T Consensus 256 ll~~~p~~r~~l~~v~~hp 274 (281)
T KOG0580|consen 256 LLVKNPIERLALTEVMDHP 274 (281)
T ss_pred HhccCccccccHHHHhhhH
Confidence 9999999999999999863
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-43 Score=320.46 Aligned_cols=257 Identities=20% Similarity=0.243 Sum_probs=206.2
Q ss_pred HHHhcCCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeC-
Q 010932 55 RAATNGFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEG- 130 (497)
Q Consensus 55 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~- 130 (497)
....++.+++.++.+|++|+||.||+|+++ +++.||+|+++...... .-.-++||.+|.+++|||||.+-.+....
T Consensus 69 l~gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~ 148 (419)
T KOG0663|consen 69 LGGCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSN 148 (419)
T ss_pred ccCcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc
Confidence 345566778889999999999999999975 59999999998654222 23568999999999999999999987654
Q ss_pred -CceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 131 -DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 131 -~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
+..|||||||+. +|..++... +.+|...++.-++.|+++||.|||... |+||||||+|+|+++.|.+||+|||+|+
T Consensus 149 ~d~iy~VMe~~Eh-DLksl~d~m-~q~F~~~evK~L~~QlL~glk~lH~~w-ilHRDLK~SNLLm~~~G~lKiaDFGLAR 225 (419)
T KOG0663|consen 149 MDKIYIVMEYVEH-DLKSLMETM-KQPFLPGEVKTLMLQLLRGLKHLHDNW-ILHRDLKTSNLLLSHKGILKIADFGLAR 225 (419)
T ss_pred cceeeeeHHHHHh-hHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHHhhce-eEecccchhheeeccCCcEEecccchhh
Confidence 569999999974 688888764 468999999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCC----CccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc-------------
Q 010932 210 NSRDG----KSYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL------------- 271 (497)
Q Consensus 210 ~~~~~----~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~------------- 271 (497)
..... +..+.|.+|+|||.+.+. .|+...|+||+|||+.||+++++.|++...-......+.
T Consensus 226 ~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~ 305 (419)
T KOG0663|consen 226 EYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGY 305 (419)
T ss_pred hhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCc
Confidence 77655 345679999999999974 589999999999999999999988876521111000000
Q ss_pred ------------cccccccCCCCCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 272 ------------LLMDSSLEGQYANE-DATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 272 ------------~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
......++..++.. .++.-.+|+..+|..||.+|.|+.+.|++
T Consensus 306 ~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 306 SELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred cccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 00000111112211 45778999999999999999999999987
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=342.45 Aligned_cols=253 Identities=21% Similarity=0.274 Sum_probs=204.5
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
+++.+++.||+|+||.||++.+. +|..||+|++...... ..+.+.+|+++|++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 45678888999999999999976 4889999998754322 245799999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--Ccc
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KSY 217 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~ 217 (497)
+++++|.+++.. ...+++..+..++.|++.||.|||+.++++||||||+|||++.++.+||+|||++...... ...
T Consensus 85 ~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 162 (331)
T cd06649 85 MDGGSLDQVLKE--AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 162 (331)
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccC
Confidence 999999999865 4578999999999999999999998644999999999999999999999999998754332 345
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc---ccc-----------------------
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK---NLL----------------------- 271 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~---~~~----------------------- 271 (497)
.||+.|+|||++.+..++.++|||||||++|||++|+.||.......+... ...
T Consensus 163 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (331)
T cd06649 163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSG 242 (331)
T ss_pred CCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccc
Confidence 689999999999988999999999999999999999998854322111100 000
Q ss_pred ------------cccc---cccCCC-CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 010932 272 ------------LLMD---SSLEGQ-YANEDATQLVELASKCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 272 ------------~~~~---~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~ 316 (497)
...+ ...... .....+.++.+|+.+||+.||++|||+.+++++-.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~ 303 (331)
T cd06649 243 HGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTF 303 (331)
T ss_pred cccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChH
Confidence 0000 000000 11235678999999999999999999999999743
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-43 Score=345.93 Aligned_cols=255 Identities=22% Similarity=0.359 Sum_probs=213.6
Q ss_pred cccccCCCCCCcEEEEEEEcC--C--cE-EEEEEccCCC---CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 65 LIVSESGDKAPNVVYRGRLKN--N--RL-VAIKRFSRQS---WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~~--~--~~-vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
.+.++||+|+||.||+|.++. + .. ||||..+... ......|++|+++|++++|||||+++|++.....+++|
T Consensus 160 ~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~iv 239 (474)
T KOG0194|consen 160 ELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLV 239 (474)
T ss_pred cccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEE
Confidence 334789999999999999753 2 23 8999988533 23356899999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK- 215 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 215 (497)
||+|.||+|.++|... +..++..++..++.+++.||+|||+++ +|||||-.+|+|++.++.+||+|||+++....-.
T Consensus 240 mEl~~gGsL~~~L~k~-~~~v~~~ek~~~~~~AA~Gl~YLh~k~-~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~ 317 (474)
T KOG0194|consen 240 MELCNGGSLDDYLKKN-KKSLPTLEKLRFCYDAARGLEYLHSKN-CIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVM 317 (474)
T ss_pred EEecCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHhHHHHHHHCC-CcchhHhHHHheecCCCeEEeCccccccCCcceee
Confidence 9999999999999763 336999999999999999999999999 9999999999999999999999999988654221
Q ss_pred ---ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHH
Q 010932 216 ---SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291 (497)
Q Consensus 216 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (497)
...-...|+|||.+..+.|+.++|||||||++||+++ |..|+++.....+... +.....+...+...+..+.
T Consensus 318 ~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~k----I~~~~~r~~~~~~~p~~~~ 393 (474)
T KOG0194|consen 318 KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAK----IVKNGYRMPIPSKTPKELA 393 (474)
T ss_pred ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHH----HHhcCccCCCCCCCHHHHH
Confidence 1123578999999999999999999999999999999 7777776644433222 2233444556667888999
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHhhhhhccccch
Q 010932 292 ELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVA 325 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~~~ 325 (497)
.++.+||..+|++||||.++.+.|+.+.......
T Consensus 394 ~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~~ 427 (474)
T KOG0194|consen 394 KVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEAF 427 (474)
T ss_pred HHHHHhccCChhhccCHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999999998776643
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-43 Score=344.78 Aligned_cols=245 Identities=20% Similarity=0.214 Sum_probs=205.1
Q ss_pred CCcccccccCCCCCCcEEEEEEEcC--CcEEEEEEccCCC---CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKN--NRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
+..+.+++.||.|+||.||+|.+++ +..||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 4567788899999999999998653 4689999986432 2234578899999999999999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG- 214 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 214 (497)
||||+++|+|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 109 v~Ey~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~ 185 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRR--NKRFPNDVGCFYAAQIVLIFEYLQSLN-IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRT 185 (340)
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEecCCCCeecCCCc
Confidence 9999999999999965 467999999999999999999999999 999999999999999999999999999865432
Q ss_pred CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHH
Q 010932 215 KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 294 (497)
....||+.|+|||++.+..++.++|||||||++|||++|+.||........... +... ...++...+..+.+++
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~~~~~~~li 259 (340)
T PTZ00426 186 YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQK----ILEG--IIYFPKFLDNNCKHLM 259 (340)
T ss_pred ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHH----HhcC--CCCCCCCCCHHHHHHH
Confidence 356789999999999988899999999999999999999998865432221111 1111 1123445667789999
Q ss_pred HHhcccCCCCCC-----CHHHHHHH
Q 010932 295 SKCLQYEAKDRP-----DVKFLLSA 314 (497)
Q Consensus 295 ~~cl~~dp~~Rp-----s~~~ll~~ 314 (497)
.+||+.||++|+ |+++++++
T Consensus 260 ~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 260 KKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred HHHcccCHHHcCCCCCCCHHHHHcC
Confidence 999999999995 89999886
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=342.20 Aligned_cols=249 Identities=18% Similarity=0.198 Sum_probs=205.4
Q ss_pred cccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCC---CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSW---PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
.+.+++.||+|+||.||+|.+.+ |+.||||+++.... .....+.+|+.++..++||||+++++++...+..++|||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 46778889999999999999864 89999999975421 234578899999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC-CCcc
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD-GKSY 217 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-~~~~ 217 (497)
|+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++..... ....
T Consensus 82 ~~~g~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~ 158 (333)
T cd05600 82 YVPGGDFRTLLNN--LGVLSEDHARFYMAEMFEAVDALHELG-YIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSV 158 (333)
T ss_pred CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCc
Confidence 9999999999965 567899999999999999999999999 99999999999999999999999999986543 2456
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc--ccccccccccCCCCCHHHHHHHHHHHH
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK--NLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
.||+.|+|||++.+..++.++|||||||++|||++|..||........... ..................+.++.+|+.
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~ 238 (333)
T cd05600 159 VGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLIT 238 (333)
T ss_pred ccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHH
Confidence 789999999999999999999999999999999999998865432221110 000011111111111235778999999
Q ss_pred HhcccCCCCCCCHHHHHHH
Q 010932 296 KCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~ 314 (497)
+||..+|.+|||+.+++++
T Consensus 239 ~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 239 KLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HHhhChhhhcCCHHHHHhC
Confidence 9999999999999999987
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-43 Score=328.23 Aligned_cols=245 Identities=18% Similarity=0.230 Sum_probs=211.6
Q ss_pred CcccccccCCCCCCcEEEEEEE-cCCcEEEEEEccCCCCCChh---HHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRL-KNNRLVAIKRFSRQSWPDPH---QFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~---~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
..|.+...||+|+||+|-++.. ..|+.||||.+++....+.+ .+.+|+++|+.|+||||+.++.+|...+..+|||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 3567778889999999999995 57999999999887665543 5789999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 214 (497)
||..+|.|.+++.. .+.|++..++.+++||..|+.|+|.++ ++|||||.+|||+|.|+++||+|||++......
T Consensus 133 EYaS~GeLYDYiSe--r~~LsErEaRhfFRQIvSAVhYCHknr-VvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfL 209 (668)
T KOG0611|consen 133 EYASGGELYDYISE--RGSLSEREARHFFRQIVSAVHYCHKNR-VVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFL 209 (668)
T ss_pred EecCCccHHHHHHH--hccccHHHHHHHHHHHHHHHHHHhhcc-ceecccchhheeecCCCCeeeeccchhhhhccccHH
Confidence 99999999999976 788999999999999999999999998 999999999999999999999999999876655
Q ss_pred CccccCCCCCCccccccCCC-CcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHH
Q 010932 215 KSYSTNLAYTPPEFLRTGRV-IPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVEL 293 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 293 (497)
.+++|+|-|.+||++.+.+| .+..|.|||||+||.|+.|..||.+.....+... +-.... ..+..+.++.-|
T Consensus 210 qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQ----Is~GaY---rEP~~PSdA~gL 282 (668)
T KOG0611|consen 210 QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQ----ISRGAY---REPETPSDASGL 282 (668)
T ss_pred HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHH----hhcccc---cCCCCCchHHHH
Confidence 47899999999999999988 5689999999999999999999977643332111 111111 123345568899
Q ss_pred HHHhcccCCCCCCCHHHHHHHhh
Q 010932 294 ASKCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 294 i~~cl~~dp~~Rps~~~ll~~l~ 316 (497)
|++||..||++|.|+.+|..+-+
T Consensus 283 IRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 283 IRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred HHHHHhcCcccchhHHHHhhhhe
Confidence 99999999999999999999854
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=338.37 Aligned_cols=236 Identities=18% Similarity=0.229 Sum_probs=197.7
Q ss_pred CCCCCCcEEEEEEEcC-CcEEEEEEccCCC---CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCCh
Q 010932 70 SGDKAPNVVYRGRLKN-NRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTL 145 (497)
Q Consensus 70 lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 145 (497)
||+|+||+||++...+ ++.||+|++.... ......+.+|+.+|.+++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 5999999999999764 8899999986532 22345688999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC----CCccccCC
Q 010932 146 SKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----GKSYSTNL 221 (497)
Q Consensus 146 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~gt~ 221 (497)
.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.++|+|||+++.... .....||+
T Consensus 81 ~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 157 (312)
T cd05585 81 FHHLQR--EGRFDLSRARFYTAELLCALENLHKFN-VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTP 157 (312)
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCc
Confidence 999865 567999999999999999999999999 99999999999999999999999999875322 12356899
Q ss_pred CCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccC
Q 010932 222 AYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYE 301 (497)
Q Consensus 222 ~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 301 (497)
.|+|||++.+..++.++|||||||++|+|++|+.||........... .... ...++...+..+.+|+.+||+.|
T Consensus 158 ~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~li~~~L~~d 231 (312)
T cd05585 158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRK----ILQE--PLRFPDGFDRDAKDLLIGLLSRD 231 (312)
T ss_pred ccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHH----HHcC--CCCCCCcCCHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999998865433322111 1111 12344556778999999999999
Q ss_pred CCCCCC---HHHHHHH
Q 010932 302 AKDRPD---VKFLLSA 314 (497)
Q Consensus 302 p~~Rps---~~~ll~~ 314 (497)
|.+||+ +.+++.+
T Consensus 232 p~~R~~~~~~~e~l~h 247 (312)
T cd05585 232 PTRRLGYNGAQEIKNH 247 (312)
T ss_pred HHHcCCCCCHHHHHcC
Confidence 999974 6777765
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=340.29 Aligned_cols=237 Identities=21% Similarity=0.232 Sum_probs=199.3
Q ss_pred cCCCCCCcEEEEEEEc-CCcEEEEEEccCCC---CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCC
Q 010932 69 ESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDT 144 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 144 (497)
.||+|+||.||++..+ +|+.||||++.... ......+.+|+.+++.++||||+++++++...+..++||||+++++
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~ 81 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE 81 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence 4699999999999975 58999999997542 2234578899999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC----CCccccC
Q 010932 145 LSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----GKSYSTN 220 (497)
Q Consensus 145 L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~gt 220 (497)
|..++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.... .....||
T Consensus 82 L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 158 (328)
T cd05593 82 LFFHLSR--ERVFSEDRTRFYGAEIVSALDYLHSGK-IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGT 158 (328)
T ss_pred HHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCC
Confidence 9988865 467999999999999999999999999 99999999999999999999999999875322 1245689
Q ss_pred CCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhccc
Q 010932 221 LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQY 300 (497)
Q Consensus 221 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 300 (497)
+.|+|||++.+..++.++|||||||++|+|++|+.||............ .. ....++...+.++.+|+.+||+.
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~----~~--~~~~~p~~~~~~~~~li~~~L~~ 232 (328)
T cd05593 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI----LM--EDIKFPRTLSADAKSLLSGLLIK 232 (328)
T ss_pred cCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHh----cc--CCccCCCCCCHHHHHHHHHHcCC
Confidence 9999999999889999999999999999999999988654332221111 10 11134455677899999999999
Q ss_pred CCCCCC-----CHHHHHHH
Q 010932 301 EAKDRP-----DVKFLLSA 314 (497)
Q Consensus 301 dp~~Rp-----s~~~ll~~ 314 (497)
||++|| ++.+++++
T Consensus 233 dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 233 DPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CHHHcCCCCCCCHHHHhcC
Confidence 999997 89999987
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-43 Score=324.14 Aligned_cols=246 Identities=22% Similarity=0.304 Sum_probs=199.3
Q ss_pred cccccCCCCCCcEEEEEEEc-CCcEEEEEEccC--CCCCChhHHHHHHHHhccCCCCcceeeeeeeee-----CCceEEE
Q 010932 65 LIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE-----GDERLLV 136 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~~~~lv 136 (497)
..++.+|+|+||.|..+..+ +|+.||||.+.+ ......++..+|+++|+.++|+||+.+.+++.. -+..|+|
T Consensus 25 ~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV 104 (359)
T KOG0660|consen 25 VLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLV 104 (359)
T ss_pred cccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEe
Confidence 33678899999999999975 599999999974 334456789999999999999999999999865 3568999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC---
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD--- 213 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 213 (497)
+|+| +.+|...++. +..++...+..++.||++||.|+|+.+ |+||||||+|+|++.+..+||+|||+|+....
T Consensus 105 ~elM-etDL~~iik~--~~~L~d~H~q~f~YQiLrgLKyiHSAn-ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~ 180 (359)
T KOG0660|consen 105 FELM-ETDLHQIIKS--QQDLTDDHAQYFLYQILRGLKYIHSAN-VIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFE 180 (359)
T ss_pred hhHH-hhHHHHHHHc--CccccHHHHHHHHHHHHHhcchhhccc-ccccccchhheeeccCCCEEeccccceeeccccCc
Confidence 9999 6789999865 556999999999999999999999999 99999999999999999999999999997642
Q ss_pred ---CCccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhH-------------------HHhcccc
Q 010932 214 ---GKSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALD-------------------VIRGKNL 270 (497)
Q Consensus 214 ---~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~-------------------~~~~~~~ 270 (497)
.+.+..|.+|.|||++.. ..|+...||||+||++.||++|+..|++...- .+.....
T Consensus 181 ~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~a 260 (359)
T KOG0660|consen 181 DGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKA 260 (359)
T ss_pred ccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHH
Confidence 145667999999998865 67999999999999999999999988765210 0110001
Q ss_pred ccc---cccccCCC---CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 271 LLL---MDSSLEGQ---YANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 271 ~~~---~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
... ........ .-+..++.+.+|+.+||..||.+|+|++++|++
T Consensus 261 r~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 261 RPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 111 11111111 113456789999999999999999999999986
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-42 Score=334.73 Aligned_cols=252 Identities=18% Similarity=0.258 Sum_probs=198.0
Q ss_pred cccccccCCCCCCcEEEEEEEcC-----------------CcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeee
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN-----------------NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLI 124 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~ 124 (497)
.+.+.++||+|+||.||++.+++ +..||||++...... ....|.+|+.+|.+++||||++++
T Consensus 6 ~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 85 (304)
T cd05096 6 HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLL 85 (304)
T ss_pred hCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEE
Confidence 45677889999999999998532 347999998764322 245799999999999999999999
Q ss_pred eeeeeCCceEEEEEcCCCCChhhhhhcCC-----------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccC
Q 010932 125 GCCAEGDERLLVAQYMPNDTLSKHLFHWD-----------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDL 187 (497)
Q Consensus 125 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dl 187 (497)
+++...+..++||||+++++|.+++.... ...+++..+..++.||+.||.|||+.+ ++||||
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-ivH~dl 164 (304)
T cd05096 86 GVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN-FVHRDL 164 (304)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC-ccccCc
Confidence 99999999999999999999999885421 135788999999999999999999999 999999
Q ss_pred CCcceEeCCCCCeeEcccCCccccCCCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCC--CCCCc
Q 010932 188 NAYRVLFDEDGDPRLSSFGLMKNSRDGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGK--HIPPS 259 (497)
Q Consensus 188 kp~Nill~~~~~~kl~Dfgla~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~--~~~~~ 259 (497)
||+|||++.++.+||+|||+++...... ...++..|+|||++.++.++.++|||||||++|||+++. .|+..
T Consensus 165 kp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 244 (304)
T cd05096 165 ATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGE 244 (304)
T ss_pred chhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCc
Confidence 9999999999999999999987543321 233467899999999889999999999999999999754 34432
Q ss_pred hhhHHHhcccccccc---ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 010932 260 HALDVIRGKNLLLLM---DSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 260 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~ 316 (497)
......... ..... ........++.++..+.+|+.+||+.||++|||+.+|.+.|+
T Consensus 245 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 245 LTDEQVIEN-AGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCHHHHHHH-HHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 221111110 00000 011111223456778999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-43 Score=339.58 Aligned_cols=242 Identities=23% Similarity=0.273 Sum_probs=204.7
Q ss_pred cccCCCCCCcEEEEEEE-cCCcEEEEEEccCCCCCC---hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCC
Q 010932 67 VSESGDKAPNVVYRGRL-KNNRLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142 (497)
Q Consensus 67 ~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 142 (497)
+++||-|+||.||.+++ ++.+.||||.+.-+.... .+.+++||..|++++|||+|.+.|+|......|||||||-
T Consensus 31 LrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl- 109 (948)
T KOG0577|consen 31 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL- 109 (948)
T ss_pred HHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh-
Confidence 56779999999999996 468999999998655443 5689999999999999999999999999999999999995
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCccccCCC
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA 222 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~gt~~ 222 (497)
||-.++|.- ...++.+-.+..|+.+.+.||+|||+.+ .||||||..|||+++.|.|||+|||.+....+..+++|||.
T Consensus 110 GSAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLHS~~-~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTPy 187 (948)
T KOG0577|consen 110 GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-RIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTPY 187 (948)
T ss_pred ccHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHHhh-HHhhhccccceEecCCCeeeeccccchhhcCchhcccCCcc
Confidence 566676644 2678999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred CCCccccc---cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcc
Q 010932 223 YTPPEFLR---TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299 (497)
Q Consensus 223 y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 299 (497)
|||||++. .+.|+.|+||||||+++.||...++|.+..+ .+..-..+..-++... ....++..+..|+..||+
T Consensus 188 wMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN--AMSALYHIAQNesPtL--qs~eWS~~F~~Fvd~CLq 263 (948)
T KOG0577|consen 188 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--AMSALYHIAQNESPTL--QSNEWSDYFRNFVDSCLQ 263 (948)
T ss_pred ccchhHheeccccccCCccceeeccchhhhhhhcCCCccCch--HHHHHHHHHhcCCCCC--CCchhHHHHHHHHHHHHh
Confidence 99999996 4789999999999999999999987654332 1111111111111111 146788999999999999
Q ss_pred cCCCCCCCHHHHHHHh
Q 010932 300 YEAKDRPDVKFLLSAV 315 (497)
Q Consensus 300 ~dp~~Rps~~~ll~~l 315 (497)
+-|.+|||.++++.+-
T Consensus 264 KipqeRptse~ll~H~ 279 (948)
T KOG0577|consen 264 KIPQERPTSEELLKHR 279 (948)
T ss_pred hCcccCCcHHHHhhcc
Confidence 9999999999999863
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-42 Score=322.12 Aligned_cols=251 Identities=20% Similarity=0.192 Sum_probs=212.2
Q ss_pred cCCCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCC---hhHHHHHHHHhccCCCCcceeeeeeeeeCCceE
Q 010932 59 NGFSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 59 ~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 134 (497)
-+++..++++.||.|.-|+||++..++ +..+|+|++.+..... ..+...|-+||+.+.||.++.||..|..+...|
T Consensus 74 l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~c 153 (459)
T KOG0610|consen 74 LGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSC 153 (459)
T ss_pred cCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeE
Confidence 356677889999999999999999875 7999999998754433 456788999999999999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC--
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR-- 212 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~-- 212 (497)
+|||||+||+|..+++++.++.+++..++.++.+|+-||+|||-.| ||+|||||+||||-++|++.|+||.|+....
T Consensus 154 l~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG-ivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 154 LVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG-IVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc-eeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 9999999999999999888899999999999999999999999999 9999999999999999999999998764210
Q ss_pred --------------------------------C-C-------------------------CccccCCCCCCccccccCCC
Q 010932 213 --------------------------------D-G-------------------------KSYSTNLAYTPPEFLRTGRV 234 (497)
Q Consensus 213 --------------------------------~-~-------------------------~~~~gt~~y~aPE~~~~~~~ 234 (497)
. . .+++||-.|+|||++.+...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 0 0 12457888999999999999
Q ss_pred CcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC----HHH
Q 010932 235 IPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPD----VKF 310 (497)
Q Consensus 235 ~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~~ 310 (497)
+.++|+|+|||.||||+.|..||.+......... ++...+.-.-.+..+..+.+||+++|.+||.+|.. +.|
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~N----Iv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~e 388 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRN----IVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAE 388 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHH----HhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHH
Confidence 9999999999999999999999987654443322 23222222222356788999999999999999987 677
Q ss_pred HHHH
Q 010932 311 LLSA 314 (497)
Q Consensus 311 ll~~ 314 (497)
|-+|
T Consensus 389 IK~H 392 (459)
T KOG0610|consen 389 IKRH 392 (459)
T ss_pred hhcC
Confidence 6664
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=339.61 Aligned_cols=237 Identities=22% Similarity=0.251 Sum_probs=198.5
Q ss_pred cCCCCCCcEEEEEEEc-CCcEEEEEEccCCC---CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCC
Q 010932 69 ESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDT 144 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 144 (497)
.||+|+||.||++..+ +|..||+|++.... ......+.+|+.+++.++||||+++++++...+..++||||+++++
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCc
Confidence 4699999999999975 58999999997532 1234567889999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----CccccC
Q 010932 145 LSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KSYSTN 220 (497)
Q Consensus 145 L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~gt 220 (497)
|..++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ....||
T Consensus 82 L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 158 (323)
T cd05595 82 LFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 158 (323)
T ss_pred HHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCC
Confidence 9988865 457899999999999999999999999 999999999999999999999999998753221 235689
Q ss_pred CCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhccc
Q 010932 221 LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQY 300 (497)
Q Consensus 221 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 300 (497)
+.|+|||++.+..++.++|||||||++|||++|+.||............ ... ...++...++.+.+++.+||+.
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~----~~~--~~~~p~~~~~~~~~li~~~L~~ 232 (323)
T cd05595 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI----LME--EIRFPRTLSPEAKSLLAGLLKK 232 (323)
T ss_pred cCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH----hcC--CCCCCCCCCHHHHHHHHHHccC
Confidence 9999999999899999999999999999999999988654322211111 111 1123455677899999999999
Q ss_pred CCCCCC-----CHHHHHHH
Q 010932 301 EAKDRP-----DVKFLLSA 314 (497)
Q Consensus 301 dp~~Rp-----s~~~ll~~ 314 (497)
||++|| ++.+++++
T Consensus 233 dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 233 DPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CHHHhCCCCCCCHHHHHcC
Confidence 999998 89999886
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-42 Score=344.95 Aligned_cols=250 Identities=20% Similarity=0.316 Sum_probs=200.0
Q ss_pred cccccccCCCCCCcEEEEEEE------cCCcEEEEEEccCCCC-CChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceE
Q 010932 63 SELIVSESGDKAPNVVYRGRL------KNNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 134 (497)
++.+.+.||+|+||+||+|.+ .++..||||+++.... ...+.+.+|+.+|..+ +||||+++++++...+..+
T Consensus 36 ~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~ 115 (375)
T cd05104 36 RLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTL 115 (375)
T ss_pred HeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcce
Confidence 456678889999999999974 2366899999975432 2345789999999999 8999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCC-------------------------------------------------------------
Q 010932 135 LVAQYMPNDTLSKHLFHWD------------------------------------------------------------- 153 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~------------------------------------------------------------- 153 (497)
+||||+++|+|.+++....
T Consensus 116 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (375)
T cd05104 116 VITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYI 195 (375)
T ss_pred eeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceec
Confidence 9999999999999885421
Q ss_pred ------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC------
Q 010932 154 ------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK------ 215 (497)
Q Consensus 154 ------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------ 215 (497)
...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++......
T Consensus 196 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 274 (375)
T cd05104 196 DQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN-CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKG 274 (375)
T ss_pred ccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCchhhEEEECCCcEEEecCccceeccCcccccccC
Confidence 125788999999999999999999999 9999999999999999999999999987544322
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 294 (497)
...++..|+|||++.+..++.++|||||||++|||++ |..||....... .....+........+...+.++.+|+
T Consensus 275 ~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li 350 (375)
T cd05104 275 NARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS----KFYKMIKEGYRMLSPECAPSEMYDIM 350 (375)
T ss_pred CCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH----HHHHHHHhCccCCCCCCCCHHHHHHH
Confidence 1223567999999999999999999999999999998 666664322111 01111111122223334567899999
Q ss_pred HHhcccCCCCCCCHHHHHHHhhh
Q 010932 295 SKCLQYEAKDRPDVKFLLSAVAP 317 (497)
Q Consensus 295 ~~cl~~dp~~Rps~~~ll~~l~~ 317 (497)
.+||+.||++|||+.+|++.|+.
T Consensus 351 ~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 351 KSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred HHHccCChhHCcCHHHHHHHHHh
Confidence 99999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-42 Score=331.12 Aligned_cols=249 Identities=20% Similarity=0.254 Sum_probs=199.1
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
.+.+++.||+|+||+||+++++ +++.||||++..... ...+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 4567888999999999999986 488999999875432 2245788999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-----
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----- 214 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 214 (497)
++++++..+... ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (287)
T cd07848 82 VEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKND-IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANY 158 (287)
T ss_pred CCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccCcccccccccccc
Confidence 998877655432 457999999999999999999999999 999999999999999999999999999864332
Q ss_pred CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhc--cc------------------ccccc
Q 010932 215 KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRG--KN------------------LLLLM 274 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~--~~------------------~~~~~ 274 (497)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||+......... .. .....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07848 159 TEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLR 238 (287)
T ss_pred cccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccc
Confidence 23467899999999998889999999999999999999998886532111000 00 00000
Q ss_pred ccccC------CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 275 DSSLE------GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 275 ~~~~~------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+... .......+..+.+|+.+||+.||++|||+++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 239 FPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred cCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000 01112256779999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=345.34 Aligned_cols=252 Identities=21% Similarity=0.317 Sum_probs=202.7
Q ss_pred cccccccCCCCCCcEEEEEEEc------CCcEEEEEEccCCCCCC-hhHHHHHHHHhccC-CCCcceeeeeeeeeCCceE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK------NNRLVAIKRFSRQSWPD-PHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 134 (497)
.+.+.+.||+|+||.||++.+. ++..||||+++...... .+.+.+|+.+++.+ +|+|||++++++......+
T Consensus 39 ~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~ 118 (374)
T cd05106 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVL 118 (374)
T ss_pred HceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeE
Confidence 4567788999999999999852 24589999997543322 45688999999999 8999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCC-------------------------------------------------------------
Q 010932 135 LVAQYMPNDTLSKHLFHWD------------------------------------------------------------- 153 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~------------------------------------------------------------- 153 (497)
+||||+++|+|.+++....
T Consensus 119 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (374)
T cd05106 119 VITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSK 198 (374)
T ss_pred EeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccccc
Confidence 9999999999999885321
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC------ccccC
Q 010932 154 -------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK------SYSTN 220 (497)
Q Consensus 154 -------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------~~~gt 220 (497)
...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++...... ...++
T Consensus 199 ~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g-iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~ 277 (374)
T cd05106 199 DEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN-CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLP 277 (374)
T ss_pred chhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCc
Confidence 134788999999999999999999999 9999999999999999999999999987543322 12235
Q ss_pred CCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcc
Q 010932 221 LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299 (497)
Q Consensus 221 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 299 (497)
+.|||||++.+..++.++|||||||++|+|++ |+.||+...... ..............+...+.++.+++.+||+
T Consensus 278 ~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 353 (374)
T cd05106 278 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS----KFYKMVKRGYQMSRPDFAPPEIYSIMKMCWN 353 (374)
T ss_pred cceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH----HHHHHHHcccCccCCCCCCHHHHHHHHHHcC
Confidence 67999999998899999999999999999997 888875432211 1111111122222333456789999999999
Q ss_pred cCCCCCCCHHHHHHHhhhhh
Q 010932 300 YEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 300 ~dp~~Rps~~~ll~~l~~~~ 319 (497)
.||++|||+.+|++.|+.+.
T Consensus 354 ~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 354 LEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CChhhCcCHHHHHHHHHHHh
Confidence 99999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-42 Score=327.44 Aligned_cols=250 Identities=21% Similarity=0.265 Sum_probs=203.7
Q ss_pred CcccccccCCCCCCcEEEEEEEc----CCcEEEEEEccCCCCCC-hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK----NNRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
..+.+.+.||+|+||.||+|.++ .+..||+|.++...... ...|.+|+.++.+++||||+++++++..++..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 34567778899999999999863 36789999998653222 35789999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK- 215 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 215 (497)
|||+++++|.+++... ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.++++|||.+.......
T Consensus 85 ~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH~~~-iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~ 162 (266)
T cd05064 85 TEYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLSEMG-YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAI 162 (266)
T ss_pred EEeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC-EeeccccHhhEEEcCCCcEEECCCcccccccccch
Confidence 9999999999998653 457899999999999999999999999 9999999999999999999999999876432221
Q ss_pred ----ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHH
Q 010932 216 ----SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290 (497)
Q Consensus 216 ----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (497)
...++..|+|||.+.+..++.++|||||||++||+++ |..||.......... .+........+..++..+
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 237 (266)
T cd05064 163 YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIK-----AVEDGFRLPAPRNCPNLL 237 (266)
T ss_pred hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHH-----HHHCCCCCCCCCCCCHHH
Confidence 1234568999999999999999999999999999775 887775432221111 111112223455577789
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHhhhh
Q 010932 291 VELASKCLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 291 ~~li~~cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
.+++.+||+.+|.+|||+.+|++.|..+
T Consensus 238 ~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 238 HQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 9999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-42 Score=330.59 Aligned_cols=251 Identities=23% Similarity=0.357 Sum_probs=206.2
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-C-----cEEEEEEccCCCCCC-hhHHHHHHHHhccCCCCcceeeeeeeeeCCceE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-N-----RLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~-----~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 134 (497)
.++.+++.||.|+||.||+|.... + ..||+|.+....... ...|.+|+.++..++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 355778889999999999998643 2 579999987543222 456899999999999999999999999988999
Q ss_pred EEEEcCCCCChhhhhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCe
Q 010932 135 LVAQYMPNDTLSKHLFHWDK--------------QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDP 200 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~ 200 (497)
++|||+++++|.+++..... ..+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.+
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~ 163 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH-FVHRDLAARNCLVGEGLTV 163 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccccceEEEcCCCcE
Confidence 99999999999999865321 56889999999999999999999999 9999999999999999999
Q ss_pred eEcccCCccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccc
Q 010932 201 RLSSFGLMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLL 273 (497)
Q Consensus 201 kl~Dfgla~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~ 273 (497)
+|+|||+++..... ....+++.|+|||.+.+..++.++|||||||++|||++ |..||.......+ ...
T Consensus 164 ~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~-----~~~ 238 (283)
T cd05048 164 KISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEV-----IEM 238 (283)
T ss_pred EECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHH
Confidence 99999998754322 23345778999999998899999999999999999998 8888765332221 111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhh
Q 010932 274 MDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 274 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
+........+..++..+.+|+.+||+.||.+|||+.+|+++|+.+
T Consensus 239 i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 239 IRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 212222334556788899999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-42 Score=325.05 Aligned_cols=251 Identities=20% Similarity=0.318 Sum_probs=208.2
Q ss_pred CCcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
.+++.+++++|+|+||.||+|...++..||+|.+.... ...+.+.+|+.+++.++|+||+++++.+...+..+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 35678889999999999999998778889999987543 23578999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-----
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK----- 215 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 215 (497)
++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 162 (261)
T cd05072 84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN-YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 162 (261)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEecCCCcEEECCCccceecCCCceeccC
Confidence 9999999997655677899999999999999999999998 9999999999999999999999999998654322
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 294 (497)
...++..|+|||++.+..++.++|||||||++|+|+| |..|+........... +............+..+.+++
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~li 237 (261)
T cd05072 163 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSA-----LQRGYRMPRMENCPDELYDIM 237 (261)
T ss_pred CCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHH-----HHcCCCCCCCCCCCHHHHHHH
Confidence 2234567999999998889999999999999999998 8877754322211111 111111122234567799999
Q ss_pred HHhcccCCCCCCCHHHHHHHhhhh
Q 010932 295 SKCLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 295 ~~cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
.+||..+|++|||++++++.|+.+
T Consensus 238 ~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 238 KTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred HHHccCCcccCcCHHHHHHHHhcC
Confidence 999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-42 Score=329.69 Aligned_cols=251 Identities=21% Similarity=0.302 Sum_probs=199.2
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
.+.|.+++.||.|+||+||+|..+ ++..||+|+++..... ....+.+|+.+++.++||||+++++++......++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence 456788899999999999999976 5899999998754322 34568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---- 214 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 214 (497)
|+++ +|.+++... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~~~~-~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~ 160 (288)
T cd07871 84 YLDS-DLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCHKRK-ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTY 160 (288)
T ss_pred CCCc-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEECcCcceeeccCCCccc
Confidence 9975 898888542 456899999999999999999999999 999999999999999999999999998754322
Q ss_pred CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc--------------------ccccc
Q 010932 215 KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK--------------------NLLLL 273 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~--------------------~~~~~ 273 (497)
....+|+.|+|||++.+ ..++.++|||||||++|+|+||+.||........... .....
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (288)
T cd07871 161 SNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSY 240 (288)
T ss_pred cCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhcc
Confidence 23457889999999875 5689999999999999999999988865422111000 00000
Q ss_pred cccccCC----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 274 MDSSLEG----QYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 274 ~~~~~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..+.... ...+..+.++.+|+.+||+.||.+|||+++++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 241 LFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred ccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000000 0012345678999999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-42 Score=342.18 Aligned_cols=247 Identities=18% Similarity=0.177 Sum_probs=198.3
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC---CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW---PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
.+.+++.||+|+||+||+|... +++.||||++..... .....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 3567889999999999999975 489999999975432 224568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC-----
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----- 213 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 213 (497)
|++||+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++++||+|||+++....
T Consensus 82 ~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~ 158 (381)
T cd05626 82 YIPGGDMMSLLIR--MEVFPEVLARFYIAELTLAIESVHKMG-FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSK 158 (381)
T ss_pred cCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccc
Confidence 9999999999865 457899999999999999999999999 99999999999999999999999998753210
Q ss_pred ----------------------------------------------CCccccCCCCCCccccccCCCCcccceeehhhhH
Q 010932 214 ----------------------------------------------GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVL 247 (497)
Q Consensus 214 ----------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l 247 (497)
.....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il 238 (381)
T cd05626 159 YYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL 238 (381)
T ss_pred cccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence 0124689999999999988899999999999999
Q ss_pred HHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHh--cccCCCCCCCHHHHHHH
Q 010932 248 LDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKC--LQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 248 ~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c--l~~dp~~Rps~~~ll~~ 314 (497)
|||+||..||............. . .............+.++.+|+.+| +..+|..||++.+++.+
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~-~-~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 239 FEMLVGQPPFLAPTPTETQLKVI-N-WENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred HHHHhCCCCCcCCCHHHHHHHHH-c-cccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 99999999886543222111100 0 011111111223567889999984 45566669999999986
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-42 Score=338.02 Aligned_cols=238 Identities=22% Similarity=0.246 Sum_probs=198.2
Q ss_pred cCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC---CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCC
Q 010932 69 ESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW---PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDT 144 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 144 (497)
.||+|+||+||++... +|+.||+|+++.... .....+.+|++++..++||||+++++++...+..++||||+++++
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence 4699999999999975 589999999975322 224567889999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCcccccCCCcceEeCCCCCeeEcccCCccccCC----CCcccc
Q 010932 145 LSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNS-QNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----GKSYST 219 (497)
Q Consensus 145 L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~g 219 (497)
|..++.. ...+++..+..++.||+.||.|||+ .+ ++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~~-ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (325)
T cd05594 82 LFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCG 158 (325)
T ss_pred HHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhcCC-EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccC
Confidence 9988864 4679999999999999999999997 67 99999999999999999999999999874322 124568
Q ss_pred CCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcc
Q 010932 220 NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299 (497)
Q Consensus 220 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 299 (497)
|+.|+|||++.+..++.++|||||||++|+|+||+.||............ ... ...++...++.+.+|+.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i----~~~--~~~~p~~~~~~~~~li~~~L~ 232 (325)
T cd05594 159 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI----LME--EIRFPRTLSPEAKSLLSGLLK 232 (325)
T ss_pred CcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHH----hcC--CCCCCCCCCHHHHHHHHHHhh
Confidence 99999999999899999999999999999999999988654332221111 101 112344567789999999999
Q ss_pred cCCCCCC-----CHHHHHHHh
Q 010932 300 YEAKDRP-----DVKFLLSAV 315 (497)
Q Consensus 300 ~dp~~Rp-----s~~~ll~~l 315 (497)
.||++|+ ++.+++++-
T Consensus 233 ~dP~~R~~~~~~~~~~il~h~ 253 (325)
T cd05594 233 KDPKQRLGGGPDDAKEIMQHK 253 (325)
T ss_pred cCHHHhCCCCCCCHHHHhcCC
Confidence 9999996 899999873
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=323.66 Aligned_cols=249 Identities=21% Similarity=0.345 Sum_probs=207.4
Q ss_pred cccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
++.+.+.+|.|+||.||+|..++ ++.||+|++.... .....+.+|+++++.++||||+++++++......++||||++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence 45667788999999999999764 8899999987543 335679999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-----c
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK-----S 216 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 216 (497)
+++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||++....... .
T Consensus 86 ~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~ 164 (263)
T cd05052 86 YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 164 (263)
T ss_pred CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCcEEeCCCccccccccceeeccCC
Confidence 999999997655567999999999999999999999998 9999999999999999999999999987654332 1
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
..++..|+|||.+.+..++.++|||||||++|||++ |..|++........ ..+........+...+..+.+++.
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~ 239 (263)
T cd05052 165 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-----ELLEKGYRMERPEGCPPKVYELMR 239 (263)
T ss_pred CCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-----HHHHCCCCCCCCCCCCHHHHHHHH
Confidence 223567999999998899999999999999999998 77777554322211 111112223445556788999999
Q ss_pred HhcccCCCCCCCHHHHHHHhhhh
Q 010932 296 KCLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
+||+.||++|||+.++++.|+.+
T Consensus 240 ~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 240 ACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHccCCcccCCCHHHHHHHHHhh
Confidence 99999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-42 Score=335.81 Aligned_cols=251 Identities=20% Similarity=0.262 Sum_probs=201.2
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
+.|.+++.||.|+||.||++.+. +|..+|+|++...... ....+.+|+++++.++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence 35677888999999999999986 4889999998754322 235789999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--Ccc
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KSY 217 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~ 217 (497)
+++++|.+++.. .+.+++..+..++.+++.||.|||+.++++|+||||+|||++.++.+||+|||++...... ...
T Consensus 85 ~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~ 162 (333)
T cd06650 85 MDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 162 (333)
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccC
Confidence 999999999865 4568999999999999999999998533999999999999999999999999998754322 345
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc-------ccc-------------------
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK-------NLL------------------- 271 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~-------~~~------------------- 271 (497)
.+|..|+|||++.+..++.++|||||||++|+|++|+.||........... ...
T Consensus 163 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (333)
T cd06650 163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYG 242 (333)
T ss_pred CCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhc
Confidence 688999999999988899999999999999999999998764322111000 000
Q ss_pred ----------cccccc---cCCCCC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 272 ----------LLMDSS---LEGQYA-NEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 272 ----------~~~~~~---~~~~~~-~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
...+.. .....+ ...+.++.+|+.+||+.||++|||+.+++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 243 PDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH 299 (333)
T ss_pred ccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence 000000 000000 1235678999999999999999999999986
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-42 Score=300.81 Aligned_cols=257 Identities=17% Similarity=0.215 Sum_probs=211.0
Q ss_pred CCCcccccccCCCCCCcEEEEEE-EcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeC-----Cce
Q 010932 60 GFSSELIVSESGDKAPNVVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG-----DER 133 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~ 133 (497)
|=+.|++.+.+|.|+|+-||++. ..+++.+|+|++......+.+..++|++..++++||||++++++...+ ...
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 33678899999999999999999 456899999999887777888999999999999999999999887543 348
Q ss_pred EEEEEcCCCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCC-CcccccCCCcceEeCCCCCeeEcccCCccc
Q 010932 134 LLVAQYMPNDTLSKHLFHWD--KQPLPWEMRVRVAYYIAQALDHCNSQN-RKLYHDLNAYRVLFDEDGDPRLSSFGLMKN 210 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~lh~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 210 (497)
||+++|...|||.+.+...+ +..+++.+++.|+.+|++||.+||+.. +..||||||.|||+++.+.++|.|||.++.
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccc
Confidence 99999999999999987543 557999999999999999999999975 489999999999999999999999998875
Q ss_pred cCCC---C----------ccccCCCCCCccccc---cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccccc
Q 010932 211 SRDG---K----------SYSTNLAYTPPEFLR---TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLM 274 (497)
Q Consensus 211 ~~~~---~----------~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~ 274 (497)
..-. . ...-|..|+|||.+. +...+.++|||||||+||.|+.|..||... ...+..+...+
T Consensus 179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~---~~~GgSlaLAv 255 (302)
T KOG2345|consen 179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERI---YQQGGSLALAV 255 (302)
T ss_pred cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHH---hhcCCeEEEee
Confidence 4321 1 112378999999986 455789999999999999999999988432 22334333322
Q ss_pred -ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 275 -DSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 275 -~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
......+-....++.+.+|+.+||+.||.+||++.+++..++.+.
T Consensus 256 ~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 256 QNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred eccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 222222223348889999999999999999999999999988764
|
|
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-42 Score=340.19 Aligned_cols=246 Identities=23% Similarity=0.254 Sum_probs=203.4
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC---CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
.|.+++.||+|+||+||+|... +|+.||||+++... ......+.+|+.++..++||||+++++++.+++..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME 81 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence 4567888999999999999976 59999999997532 2234678899999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC---
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--- 215 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 215 (497)
|+++++|.+++.. ...+++..+..++.||+.||.|||+.| ++||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 82 YMPGGDLMNLLIR--KDVFPEETARFYIAELVLALDSVHKLG-FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 9999999999975 368999999999999999999999999 9999999999999999999999999987543322
Q ss_pred ------------------------------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHH
Q 010932 216 ------------------------------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVI 265 (497)
Q Consensus 216 ------------------------------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~ 265 (497)
...||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 238 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET 238 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence 34678999999999999999999999999999999999998865432221
Q ss_pred hccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHH
Q 010932 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPD-VKFLLSA 314 (497)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps-~~~ll~~ 314 (497)
... +.... ...........++.+.+||.+||. ||.+||+ +.+++++
T Consensus 239 ~~~-i~~~~-~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 239 YNK-IINWK-ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HHH-HhccC-CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 111 11100 111111112257789999999998 9999999 9999987
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=321.49 Aligned_cols=246 Identities=20% Similarity=0.324 Sum_probs=201.3
Q ss_pred CcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
+++.+++.||+|+||.||++.++++..+|+|.+.... .....+.+|+.+|+.++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 4556788899999999999999888899999987443 335679999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-----c
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK-----S 216 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 216 (497)
+|+|.+++... ...+++..+..++.+++.||.|||+++ ++|+||||+||+++.++.++|+|||.++...... .
T Consensus 83 ~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05114 83 NGCLLNYLRQR-QGKLSKDMLLSMCQDVCEGMEYLERNS-FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSG 160 (256)
T ss_pred CCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCC
Confidence 99999998643 346899999999999999999999999 9999999999999999999999999987543221 1
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
..++..|+|||++.+..++.++||||||+++|+|++ |+.|+........... +. .......+...+..+.+|+.
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~----i~-~~~~~~~~~~~~~~~~~li~ 235 (256)
T cd05114 161 AKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEM----IS-RGFRLYRPKLASMTVYEVMY 235 (256)
T ss_pred CCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH----HH-CCCCCCCCCCCCHHHHHHHH
Confidence 234567999999998889999999999999999999 7776643321111111 00 01111223334567999999
Q ss_pred HhcccCCCCCCCHHHHHHHh
Q 010932 296 KCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~l 315 (497)
+||+.+|++|||+.++++.|
T Consensus 236 ~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 236 SCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HHccCCcccCcCHHHHHHhh
Confidence 99999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-42 Score=324.74 Aligned_cols=250 Identities=22% Similarity=0.341 Sum_probs=210.4
Q ss_pred cccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 142 (497)
++.+++.+|.|+||.||+|...++..+++|++..........+.+|+.+++.++||||+++++++......++||||+++
T Consensus 7 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (261)
T cd05148 7 EFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEK 86 (261)
T ss_pred HHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeeccc
Confidence 35677888999999999999888999999999876655567899999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC----ccc
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK----SYS 218 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~~ 218 (497)
++|.+++.......+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||.+....... ...
T Consensus 87 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 165 (261)
T cd05148 87 GSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN-SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKK 165 (261)
T ss_pred CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccCcceEEEcCCceEEEccccchhhcCCccccccCCC
Confidence 99999997655667999999999999999999999999 9999999999999999999999999987654321 223
Q ss_pred cCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHh
Q 010932 219 TNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKC 297 (497)
Q Consensus 219 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 297 (497)
++..|+|||.+.+..++.++||||||+++|+|++ |+.|+.......... .+........+..++..+.+++.+|
T Consensus 166 ~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~ 240 (261)
T cd05148 166 IPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYD-----QITAGYRMPCPAKCPQEIYKIMLEC 240 (261)
T ss_pred CceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHH-----HHHhCCcCCCCCCCCHHHHHHHHHH
Confidence 4567999999998889999999999999999998 777765432221111 1112222334456678899999999
Q ss_pred cccCCCCCCCHHHHHHHhhhh
Q 010932 298 LQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 298 l~~dp~~Rps~~~ll~~l~~~ 318 (497)
|+.||.+|||+.++++.|+.+
T Consensus 241 l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 241 WAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred cCCCchhCcCHHHHHHHHhcC
Confidence 999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-42 Score=334.31 Aligned_cols=238 Identities=21% Similarity=0.282 Sum_probs=197.7
Q ss_pred ccCCCCCCcEEEEEEEc----CCcEEEEEEccCCC----CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 68 SESGDKAPNVVYRGRLK----NNRLVAIKRFSRQS----WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
+.||+|+||.||++... +++.||||+++... ......+.+|+.+|+.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 56799999999999852 48899999987532 12245678999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----C
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----K 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 215 (497)
+++++|.+++.. .+.+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (323)
T cd05584 82 LSGGELFMHLER--EGIFMEDTACFYLSEISLALEHLHQQG-IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTH 158 (323)
T ss_pred CCCchHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccc
Confidence 999999999865 567889999999999999999999999 999999999999999999999999998743221 2
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .+... ....+...+..+.+|+.
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~li~ 232 (323)
T cd05584 159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTID----KILKG--KLNLPPYLTPEARDLLK 232 (323)
T ss_pred ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHH----HHHcC--CCCCCCCCCHHHHHHHH
Confidence 3568999999999998889999999999999999999999886543222111 11111 11334556778999999
Q ss_pred HhcccCCCCCC-----CHHHHHHH
Q 010932 296 KCLQYEAKDRP-----DVKFLLSA 314 (497)
Q Consensus 296 ~cl~~dp~~Rp-----s~~~ll~~ 314 (497)
+||+.||++|| ++.+++++
T Consensus 233 ~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 233 KLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred HHcccCHhHcCCCCCCCHHHHhcC
Confidence 99999999999 88888875
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-42 Score=342.26 Aligned_cols=246 Identities=18% Similarity=0.174 Sum_probs=199.9
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC---CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
++.+++.||.|+||+||++... +|+.||||++.... ......+.+|+.+|..++||||+++++++.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME 81 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence 4567888899999999999976 48999999997532 1224567899999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---- 214 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 214 (497)
|+++|+|.+++.. .+.+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.++|+|||+++.....
T Consensus 82 ~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 82 YLPGGDMMTLLMK--KDTFTEEETRFYIAETILAIDSIHKLG-YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred CCCCcHHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 9999999999865 457999999999999999999999999 999999999999999999999999998643211
Q ss_pred --------------------------------------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCC
Q 010932 215 --------------------------------------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHI 256 (497)
Q Consensus 215 --------------------------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~ 256 (497)
....||+.|+|||++.+..++.++|||||||++|||++|..|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence 023589999999999988999999999999999999999998
Q ss_pred CCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC---HHHHHHH
Q 010932 257 PPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPD---VKFLLSA 314 (497)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~ll~~ 314 (497)
|........... +... ............++.+.+||.+|+. +|.+|++ +.+++++
T Consensus 239 f~~~~~~~~~~~-i~~~-~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 239 FCSDNPQETYRK-IINW-KETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCCHHHHHHH-HHcC-CCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 865432211111 0000 0011111112356789999999997 9999997 9999886
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=330.84 Aligned_cols=250 Identities=22% Similarity=0.257 Sum_probs=195.8
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
+.+.+++.||.|+||+||+|..+ +|+.||||++...... ....+.+|+.+++.++||||+++++++.+....++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY 84 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence 45678889999999999999976 5899999998754322 234678999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----C
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----K 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 215 (497)
+. ++|.+++... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... .
T Consensus 85 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 161 (303)
T cd07869 85 VH-TDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQRY-ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYS 161 (303)
T ss_pred CC-cCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCC
Confidence 95 6777777542 457899999999999999999999999 999999999999999999999999998753322 2
Q ss_pred ccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccc------------------cccc
Q 010932 216 SYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLL------------------LMDS 276 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~------------------~~~~ 276 (497)
...+|+.|+|||++.+ ..++.++|||||||++|+|++|..||............+.. ....
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (303)
T cd07869 162 NEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPE 241 (303)
T ss_pred CCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccc
Confidence 3467899999999875 45788999999999999999999988653111000000000 0000
Q ss_pred ccCCCCCH---------HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 277 SLEGQYAN---------EDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 277 ~~~~~~~~---------~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
......+. ..+..+.+|+.+||+.||++|||+.+++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 242 RFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred cccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 00000000 123568899999999999999999999985
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-42 Score=340.10 Aligned_cols=246 Identities=19% Similarity=0.191 Sum_probs=196.2
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
++++.+++.||.|+||+||++.+. +|+.||||++...... ....+.+|+++++.++|+||+++++++...+..++|||
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 152 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLE 152 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEe
Confidence 445567788999999999999976 5899999998654322 24578999999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---- 214 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 214 (497)
|+++++|.... ..++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 153 ~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~ 225 (353)
T PLN00034 153 FMDGGSLEGTH------IADEQFLADVARQILSGIAYLHRRH-IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPC 225 (353)
T ss_pred cCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEcccccceecccccccc
Confidence 99999986532 4567788899999999999999999 999999999999999999999999998764432
Q ss_pred CccccCCCCCCcccccc-----CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHH
Q 010932 215 KSYSTNLAYTPPEFLRT-----GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQ 289 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (497)
....||..|+|||++.. ...+.++|||||||++|||++|+.||.......+.. .............+...+..
T Consensus 226 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 303 (353)
T PLN00034 226 NSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWAS--LMCAICMSQPPEAPATASRE 303 (353)
T ss_pred cccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHH--HHHHHhccCCCCCCCccCHH
Confidence 34578999999998853 223568999999999999999999885321111100 00000011122234456778
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHh
Q 010932 290 LVELASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 290 l~~li~~cl~~dp~~Rps~~~ll~~l 315 (497)
+.+||.+||+.||++|||+.+++++-
T Consensus 304 l~~li~~~l~~~P~~Rpt~~ell~hp 329 (353)
T PLN00034 304 FRHFISCCLQREPAKRWSAMQLLQHP 329 (353)
T ss_pred HHHHHHHHccCChhhCcCHHHHhcCc
Confidence 99999999999999999999999973
|
|
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-43 Score=331.17 Aligned_cols=244 Identities=27% Similarity=0.461 Sum_probs=194.9
Q ss_pred ccccCCCCCCcEEEEEEEc-----CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 66 IVSESGDKAPNVVYRGRLK-----NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 66 ~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
+.+.||.|+||.||+|.+. .+..|+||.++..... ..+.|.+|++.+++++||||++++|++...+..++|+||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4567899999999999986 2678999999654322 257899999999999999999999999988889999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-----
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----- 214 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 214 (497)
+++|+|.++|.......+++..+..|+.||+.||.|||+.+ ++|+||+++|||++.++.+||+|||++......
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~-iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~ 161 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN-IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKN 161 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT-EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence 99999999998755678999999999999999999999998 999999999999999999999999998866322
Q ss_pred -CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 215 -KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
........|+|||.+.+..++.++||||||+++|||++ |+.|+.......+ ...+........+..++..+.+
T Consensus 162 ~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 236 (259)
T PF07714_consen 162 DSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEI-----IEKLKQGQRLPIPDNCPKDIYS 236 (259)
T ss_dssp STTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHH-----HHHHHTTEETTSBTTSBHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc-----cccccccccceeccchhHHHHH
Confidence 12345678999999998899999999999999999999 5666543322211 1111222223345557788999
Q ss_pred HHHHhcccCCCCCCCHHHHHHHh
Q 010932 293 LASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~l 315 (497)
++..||+.||++|||+.++++.|
T Consensus 237 li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 237 LIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHHT-SSGGGS--HHHHHHHH
T ss_pred HHHHHcCCChhhCcCHHHHHhcC
Confidence 99999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=326.61 Aligned_cols=242 Identities=19% Similarity=0.273 Sum_probs=196.8
Q ss_pred CCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC---ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCCh
Q 010932 70 SGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP---DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTL 145 (497)
Q Consensus 70 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 145 (497)
||+|+||+||++.++ +|+.||+|++...... ..+.+..|+.+++.++||||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 599999999999975 5899999998754322 235678899999999999999999999999999999999999999
Q ss_pred hhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----Ccccc
Q 010932 146 SKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KSYST 219 (497)
Q Consensus 146 ~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~g 219 (497)
...+... ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....|
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g 159 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR-IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAG 159 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCC
Confidence 8877432 2457999999999999999999999999 999999999999999999999999998754332 23468
Q ss_pred CCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcc
Q 010932 220 NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299 (497)
Q Consensus 220 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 299 (497)
|+.|+|||++.+..++.++|||||||++|+|++|+.||................... ...++...+..+.+++.+||+
T Consensus 160 ~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~ 237 (280)
T cd05608 160 TPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND--SVTYPDKFSPASKSFCEALLA 237 (280)
T ss_pred CcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc--CCCCcccCCHHHHHHHHHHhc
Confidence 899999999999999999999999999999999999885432111000001111111 112344567789999999999
Q ss_pred cCCCCCC-----CHHHHHHH
Q 010932 300 YEAKDRP-----DVKFLLSA 314 (497)
Q Consensus 300 ~dp~~Rp-----s~~~ll~~ 314 (497)
.||++|| |+++++++
T Consensus 238 ~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 238 KDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred CCHHHhcCCCCCCHHHHhcC
Confidence 9999999 77888875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=312.95 Aligned_cols=250 Identities=22% Similarity=0.250 Sum_probs=199.3
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCc-ceeeeeeeeeCC------c
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKR-LVNLIGCCAEGD------E 132 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~------~ 132 (497)
.+..+.++|+|+||+||+|+.+ +|+.||+|++.-.... ......+|+.+|+.++|+| ||.+++++.+.+ .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 4456677899999999999965 5999999999765432 3456799999999999999 999999998877 7
Q ss_pred eEEEEEcCCCCChhhhhhcCCC--CCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccc
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDK--QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN 210 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~--~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 210 (497)
+++|+||++ .+|..++..... ..++...+..++.||+.||+|||+++ |+||||||.||||+.+|.+||+|||+|+.
T Consensus 92 l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~-IlHRDLKPQNlLi~~~G~lKlaDFGlAra 169 (323)
T KOG0594|consen 92 LYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG-ILHRDLKPQNLLISSSGVLKLADFGLARA 169 (323)
T ss_pred EEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCcceEEECCCCcEeeeccchHHH
Confidence 899999994 679998876433 47888999999999999999999999 99999999999999999999999999996
Q ss_pred cCCC----CccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc-----------cccc--
Q 010932 211 SRDG----KSYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK-----------NLLL-- 272 (497)
Q Consensus 211 ~~~~----~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~-----------~~~~-- 272 (497)
..-. ....+|.+|.|||++.+. .|+...||||+||++.||++++..|++......... ....
T Consensus 170 ~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~ 249 (323)
T KOG0594|consen 170 FSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVS 249 (323)
T ss_pred hcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCcc
Confidence 5522 345678999999999986 689999999999999999999998887532111100 0000
Q ss_pred -ccccc--cCCCC-C-------HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 273 -LMDSS--LEGQY-A-------NEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 273 -~~~~~--~~~~~-~-------~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..+.. ..... + +....+..+++.+||+.+|.+|.|+..++.|
T Consensus 250 ~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 250 SLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred ccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 00000 00000 1 1112478999999999999999999999987
|
|
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=338.78 Aligned_cols=247 Identities=16% Similarity=0.127 Sum_probs=196.6
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC---CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW---PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
++.+++.||+|+||+||++... +++.||||++..... .....+.+|+.++..++||||+++++.+.+....++|||
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E 81 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME 81 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence 3567788899999999999976 489999999975321 223568889999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---- 214 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 214 (497)
|++||+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~g-ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 82 FLPGGDMMTLLMK--KDTLTEEETQFYIAETVLAIDSIHQLG-FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 9999999999965 567999999999999999999999999 999999999999999999999999998643211
Q ss_pred -----------------------------------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCc
Q 010932 215 -----------------------------------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPS 259 (497)
Q Consensus 215 -----------------------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~ 259 (497)
....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 134689999999999999999999999999999999999998865
Q ss_pred hhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcc--cCCCCCCCHHHHHHH
Q 010932 260 HALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ--YEAKDRPDVKFLLSA 314 (497)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~--~dp~~Rps~~~ll~~ 314 (497)
......... +... ......+.....++.+.+++.+++. .++..||++.+|+++
T Consensus 239 ~~~~~~~~~-i~~~-~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 239 ETPQETYKK-VMNW-KETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCHHHHHHH-HHcC-cCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 432221111 1100 0000001111246678888888654 233356899999986
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=333.06 Aligned_cols=241 Identities=19% Similarity=0.279 Sum_probs=197.0
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC---CCChhHHHHHHHHh---ccCCCCcceeeeeeeeeCCceEEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS---WPDPHQFVTEAAGL---GNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l---~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
+.+++.||+|+||.||++.++ +|+.||||+++... ....+.+.+|+.++ +.++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 356788899999999999975 48999999997532 22234566666554 567899999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC---
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD--- 213 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 213 (497)
|||+++++|..++. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++....
T Consensus 81 ~E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05589 81 MEYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHENK-IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD 156 (324)
T ss_pred EcCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC
Confidence 99999999998874 357999999999999999999999999 99999999999999999999999999874322
Q ss_pred -CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 214 -GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 214 -~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
.....||+.|+|||++.+..++.++|||||||++|+|++|+.||........... +... ....+...+..+.+
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~----i~~~--~~~~p~~~~~~~~~ 230 (324)
T cd05589 157 RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDS----IVND--EVRYPRFLSREAIS 230 (324)
T ss_pred cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHH----HHhC--CCCCCCCCCHHHHH
Confidence 2345689999999999988999999999999999999999998865432222111 1111 11234456778999
Q ss_pred HHHHhcccCCCCCC-----CHHHHHHH
Q 010932 293 LASKCLQYEAKDRP-----DVKFLLSA 314 (497)
Q Consensus 293 li~~cl~~dp~~Rp-----s~~~ll~~ 314 (497)
++.+||+.||.+|| ++.+++++
T Consensus 231 li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 231 IMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred HHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 99999999999999 57777775
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=332.18 Aligned_cols=237 Identities=18% Similarity=0.234 Sum_probs=196.7
Q ss_pred cCCCCCCcEEEEEEEcC-CcEEEEEEccCCC---CCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 69 ESGDKAPNVVYRGRLKN-NRLVAIKRFSRQS---WPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
.||+|+||.||+|..++ |+.||||++.... ....+.+..|.+++..+ +||||+++++++...+..++||||++++
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 81 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG 81 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence 47999999999999764 8899999987532 22345677899988866 7999999999999999999999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC----CCcccc
Q 010932 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----GKSYST 219 (497)
Q Consensus 144 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~g 219 (497)
+|...+.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++..... .....|
T Consensus 82 ~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (321)
T cd05591 82 DLMFQIQR--SRKFDEPRSRFYAAEVTLALMFLHRHG-VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCG 158 (321)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeecccceecccCCcccccccc
Confidence 99988865 467899999999999999999999999 99999999999999999999999999875322 224568
Q ss_pred CCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcc
Q 010932 220 NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299 (497)
Q Consensus 220 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 299 (497)
|+.|+|||++.+..++.++|||||||++|+|++|+.||........... +... ....+...+.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~~~~~~~ll~~~L~ 232 (321)
T cd05591 159 TPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFES----ILHD--DVLYPVWLSKEAVSILKAFMT 232 (321)
T ss_pred CccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHH----HHcC--CCCCCCCCCHHHHHHHHHHhc
Confidence 9999999999988999999999999999999999998865433222111 1111 112334456789999999999
Q ss_pred cCCCCCC-------CHHHHHHH
Q 010932 300 YEAKDRP-------DVKFLLSA 314 (497)
Q Consensus 300 ~dp~~Rp-------s~~~ll~~ 314 (497)
.||++|| ++.+++++
T Consensus 233 ~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 233 KNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred cCHHHcCCCCCCCCCHHHHhcC
Confidence 9999999 88888876
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=340.89 Aligned_cols=246 Identities=18% Similarity=0.191 Sum_probs=199.6
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC---CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
.|.+++.||+|+||+||++... +++.||||++.... ......+.+|+.+|+.++||||+++++.+.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 5678899999999999999975 48999999986432 1234568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC------
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR------ 212 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~------ 212 (497)
|+++|+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++....
T Consensus 82 ~~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~ 158 (376)
T cd05598 82 YIPGGDMMSLLIR--LGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (376)
T ss_pred CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccc
Confidence 9999999999965 467899999999999999999999999 9999999999999999999999999974211
Q ss_pred -----------------------------------------CCCccccCCCCCCccccccCCCCcccceeehhhhHHHHh
Q 010932 213 -----------------------------------------DGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251 (497)
Q Consensus 213 -----------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ell 251 (497)
......||+.|+|||++.+..++.++|||||||++|||+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell 238 (376)
T cd05598 159 YYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 238 (376)
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehh
Confidence 001246899999999999989999999999999999999
Q ss_pred hCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCC---CHHHHHHH
Q 010932 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP---DVKFLLSA 314 (497)
Q Consensus 252 tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp---s~~~ll~~ 314 (497)
+|+.||........... +.. .............+..+.+++.+|+ .+|.+|+ |+.+++++
T Consensus 239 ~G~~Pf~~~~~~~~~~~-i~~-~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 239 VGQPPFLADTPAETQLK-VIN-WETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred hCCCCCCCCCHHHHHHH-Hhc-cCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 99998865432221111 000 0011111112235677889999976 5999999 89999987
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=327.15 Aligned_cols=248 Identities=17% Similarity=0.221 Sum_probs=203.6
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC---ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP---DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
+.+++.||+|+||+||++... +++.||||++...... ....+.+|+.+++.++||||+++++.+..++..++||||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence 356677899999999999975 5899999998754322 234578899999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---Cc
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---KS 216 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~ 216 (497)
+++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++...... ..
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05605 82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER-IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRG 160 (285)
T ss_pred cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcccc
Confidence 99999998886544567999999999999999999999999 999999999999999999999999998865433 23
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
..|++.|+|||++.+..++.++|||||||++|+|++|+.||.......... .+...+. .....++...+..+.+|+.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~li~~ 238 (285)
T cd05605 161 RVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKRE-EVERRVK-EDQEEYSEKFSEAARSICRQ 238 (285)
T ss_pred ccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHH-HHHHHhh-hcccccCcccCHHHHHHHHH
Confidence 467899999999998889999999999999999999999886532211110 0111111 11223445567789999999
Q ss_pred hcccCCCCCC-----CHHHHHHH
Q 010932 297 CLQYEAKDRP-----DVKFLLSA 314 (497)
Q Consensus 297 cl~~dp~~Rp-----s~~~ll~~ 314 (497)
||+.||++|| ++.+++++
T Consensus 239 ~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 239 LLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred HccCCHHHhcCCCCCCHHHHhcC
Confidence 9999999999 88899886
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=349.67 Aligned_cols=247 Identities=18% Similarity=0.214 Sum_probs=204.0
Q ss_pred CcccccccCCCCCCcEEEEEEEc-C-CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-N-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
..|.+.+.+|+|+||.||++... + +..||+|.+..........+.+|+.+|+.++|||||++++++...+..+|||||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~ 146 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY 146 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence 34778888999999999999864 3 678999987654433345688899999999999999999999999999999999
Q ss_pred CCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---
Q 010932 140 MPNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--- 214 (497)
Q Consensus 140 ~~~~~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 214 (497)
+++|+|.+++... ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~ 225 (478)
T PTZ00267 147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK-MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL 225 (478)
T ss_pred CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence 9999999887542 2457899999999999999999999999 999999999999999999999999999864332
Q ss_pred ---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHH
Q 010932 215 ---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291 (497)
Q Consensus 215 ---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (497)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||.......+.... ... .....+...+..+.
T Consensus 226 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~----~~~-~~~~~~~~~s~~~~ 300 (478)
T PTZ00267 226 DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQV----LYG-KYDPFPCPVSSGMK 300 (478)
T ss_pred ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----HhC-CCCCCCccCCHHHH
Confidence 2456899999999999999999999999999999999999988654322211111 111 11123445677899
Q ss_pred HHHHHhcccCCCCCCCHHHHHHH
Q 010932 292 ELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+|+.+||+.||++|||+.+++.+
T Consensus 301 ~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 301 ALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred HHHHHHhccChhhCcCHHHHHhC
Confidence 99999999999999999999864
|
|
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=333.04 Aligned_cols=237 Identities=22% Similarity=0.265 Sum_probs=196.0
Q ss_pred cCCCCCCcEEEEEEEc-CCcEEEEEEccCCC---CCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 69 ESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS---WPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
.||+|+||+||++..+ +++.||||++.... ....+.+..|..++..+ +||||+++++++...+..++||||++++
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g 81 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG 81 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence 4699999999999976 48999999987532 22345678888888876 6999999999999999999999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC----CCcccc
Q 010932 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----GKSYST 219 (497)
Q Consensus 144 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~g 219 (497)
+|..++.. ...+++..+..++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~i~~--~~~l~~~~~~~~~~ql~~~L~~lH~~~-ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (320)
T cd05590 82 DLMFHIQK--SRRFDEARARFYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCG 158 (320)
T ss_pred hHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccccccc
Confidence 99998865 467999999999999999999999999 99999999999999999999999999875321 234568
Q ss_pred CCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcc
Q 010932 220 NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299 (497)
Q Consensus 220 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 299 (497)
|+.|+|||++.+..++.++|||||||++|+|++|+.||.......+... +... ....+...+.++.+|+.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~----i~~~--~~~~~~~~~~~~~~li~~~L~ 232 (320)
T cd05590 159 TPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEA----ILND--EVVYPTWLSQDAVDILKAFMT 232 (320)
T ss_pred CccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHH----HhcC--CCCCCCCCCHHHHHHHHHHcc
Confidence 9999999999988899999999999999999999998865433322111 1111 112344467789999999999
Q ss_pred cCCCCCCCH------HHHHHH
Q 010932 300 YEAKDRPDV------KFLLSA 314 (497)
Q Consensus 300 ~dp~~Rps~------~~ll~~ 314 (497)
.||++||++ ++++.+
T Consensus 233 ~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 233 KNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred cCHHHCCCCCCCCCHHHHHcC
Confidence 999999998 666654
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-42 Score=358.21 Aligned_cols=251 Identities=23% Similarity=0.373 Sum_probs=207.8
Q ss_pred cccccCCCCCCcEEEEEEEcC--Cc----EEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 65 LIVSESGDKAPNVVYRGRLKN--NR----LVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~~--~~----~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
.+.+.||+|+||.||.|...+ |. .||||.++.... ....+|++|..+|+.++|||||+++|++.+....+|++
T Consensus 695 ~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~l 774 (1025)
T KOG1095|consen 695 TLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILL 774 (1025)
T ss_pred EeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEe
Confidence 445678999999999999754 43 499999986543 33568999999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 138 QYMPNDTLSKHLFHWD-----KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~-----~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
|||+||+|..+|++.. ...++....+.++.+||+|+.||++++ +|||||..+|+||+....|||+|||+|+...
T Consensus 775 eyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~-fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy 853 (1025)
T KOG1095|consen 775 EYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH-FVHRDLAARNCLLDERRVVKIADFGLARDIY 853 (1025)
T ss_pred hhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC-CcCcchhhhheeecccCcEEEcccchhHhhh
Confidence 9999999999998641 456899999999999999999999999 9999999999999999999999999999443
Q ss_pred CCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccc-ccccccCCCCCHH
Q 010932 213 DGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLL-LMDSSLEGQYANE 285 (497)
Q Consensus 213 ~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 285 (497)
... .-.-...|||||.+..+.++.|+|||||||+|||++|...+|+... ....+.. ++... +.+.|..
T Consensus 854 ~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~----~n~~v~~~~~~gg-RL~~P~~ 928 (1025)
T KOG1095|consen 854 DKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSR----SNFEVLLDVLEGG-RLDPPSY 928 (1025)
T ss_pred hchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCc----chHHHHHHHHhCC-ccCCCCC
Confidence 321 1112368999999999999999999999999999999665443321 1111112 22222 5567888
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 286 DATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 286 ~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
|+..+.+||..||+.+|++||++..|++.+..+...
T Consensus 929 CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 929 CPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred CChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 999999999999999999999999999988777643
|
|
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=340.50 Aligned_cols=246 Identities=18% Similarity=0.190 Sum_probs=197.7
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC---CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW---PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
.+.+++.||+|+||+||+|... +++.||||++..... ...+.+.+|+.++++++||||+++++.+.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 3567888999999999999975 489999999875422 224568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC-----
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----- 213 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 213 (497)
|+++|+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||++.....
T Consensus 82 ~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~al~~lH~~~-ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~ 158 (382)
T cd05625 82 YIPGGDMMSLLIR--MGIFPEDLARFYIAELTCAVESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (382)
T ss_pred CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEeECCCCcccccccccc
Confidence 9999999999865 457899999999999999999999999 99999999999999999999999999742110
Q ss_pred ----------------------------------------------CCccccCCCCCCccccccCCCCcccceeehhhhH
Q 010932 214 ----------------------------------------------GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVL 247 (497)
Q Consensus 214 ----------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l 247 (497)
.....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil 238 (382)
T cd05625 159 YYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 238 (382)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHH
Confidence 0124688999999999998999999999999999
Q ss_pred HHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC---HHHHHHH
Q 010932 248 LDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPD---VKFLLSA 314 (497)
Q Consensus 248 ~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~ll~~ 314 (497)
|||++|+.||........... +.. .............++++.+++.+|+ .+|.+|++ +.+++++
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~-i~~-~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 305 (382)
T cd05625 239 YEMLVGQPPFLAQTPLETQMK-VIN-WQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH 305 (382)
T ss_pred HHHHhCCCCCCCCCHHHHHHH-HHc-cCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence 999999998865432211111 000 0111111112345677889998876 59999997 8888875
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=326.02 Aligned_cols=250 Identities=23% Similarity=0.273 Sum_probs=194.1
Q ss_pred cccccccCCCCCCcEEEEEEEc--CCcEEEEEEccCCCCC--ChhHHHHHHHHhccC---CCCcceeeeeeeee-----C
Q 010932 63 SELIVSESGDKAPNVVYRGRLK--NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNV---RHKRLVNLIGCCAE-----G 130 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l---~h~niv~~~~~~~~-----~ 130 (497)
.|.+++.||+|+||+||+|... +|..||||+++..... ....+.+|+.+++.+ +||||+++++++.. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 4567888999999999999863 3788999998754322 234567787777665 69999999998852 3
Q ss_pred CceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccc
Q 010932 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN 210 (497)
Q Consensus 131 ~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 210 (497)
...++||||++ ++|.+++.......+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~-iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARI 159 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEcCCCCEEEccccceEe
Confidence 56899999996 68999887655567999999999999999999999999 99999999999999999999999999875
Q ss_pred cCCC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc----------------
Q 010932 211 SRDG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL---------------- 271 (497)
Q Consensus 211 ~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~---------------- 271 (497)
.... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||..............
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 239 (290)
T cd07862 160 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 239 (290)
T ss_pred ccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcc
Confidence 4432 345678999999999988899999999999999999999988764322111000000
Q ss_pred --cccccccC---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 272 --LLMDSSLE---GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 272 --~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
........ ....+..+..+.+|+.+||+.||++|||+.+++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 240 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred cchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 00000000 00112345678999999999999999999999974
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=334.27 Aligned_cols=241 Identities=19% Similarity=0.272 Sum_probs=196.1
Q ss_pred cCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC---CChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 69 ESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW---PDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
.||+|+||.||++.++ +++.||||+++.... .....+.+|..++..+ +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g 81 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG 81 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999976 489999999975422 2245688899999888 6999999999999999999999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC----CCCcccc
Q 010932 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR----DGKSYST 219 (497)
Q Consensus 144 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----~~~~~~g 219 (497)
+|..++.. .+.+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++... ......|
T Consensus 82 ~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (329)
T cd05588 82 DLMFHMQR--QRKLPEEHARFYSAEISLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCG 158 (329)
T ss_pred CHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccC
Confidence 99988864 467999999999999999999999999 9999999999999999999999999987422 1234578
Q ss_pred CCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc----cc-ccccccccCCCCCHHHHHHHHHHH
Q 010932 220 NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK----NL-LLLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 220 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~l~~li 294 (497)
|+.|+|||++.+..++.++|||||||++|+|++|+.||........... .. ..+... ....|...+..+.+++
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~li 236 (329)
T cd05588 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKASSVL 236 (329)
T ss_pred CccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC--CCCCCCCCCHHHHHHH
Confidence 9999999999998999999999999999999999998853211000000 00 011111 1234455677899999
Q ss_pred HHhcccCCCCCCC------HHHHHHH
Q 010932 295 SKCLQYEAKDRPD------VKFLLSA 314 (497)
Q Consensus 295 ~~cl~~dp~~Rps------~~~ll~~ 314 (497)
.+||+.||.+||| +.+++++
T Consensus 237 ~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 237 KGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred HHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 9999999999997 6788765
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=338.92 Aligned_cols=253 Identities=20% Similarity=0.283 Sum_probs=203.4
Q ss_pred CcccccccCCCCCCcEEEEEEEcC------CcEEEEEEccCCCCC-ChhHHHHHHHHhccCC-CCcceeeeeeeeeCCce
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDER 133 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~ 133 (497)
+.+.+.+.||.|+||.||+|.+.. +..||||++...... ..+.+.+|+.+|+++. ||||+++++++......
T Consensus 37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~ 116 (400)
T cd05105 37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPI 116 (400)
T ss_pred cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCce
Confidence 355677889999999999998632 347999999754332 2467999999999996 99999999999999999
Q ss_pred EEEEEcCCCCChhhhhhcCC------------------------------------------------------------
Q 010932 134 LLVAQYMPNDTLSKHLFHWD------------------------------------------------------------ 153 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~------------------------------------------------------------ 153 (497)
+|||||+++|+|.++|....
T Consensus 117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (400)
T cd05105 117 YIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKE 196 (400)
T ss_pred EEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhh
Confidence 99999999999998875421
Q ss_pred ----------------------------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCC
Q 010932 154 ----------------------------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGD 199 (497)
Q Consensus 154 ----------------------------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~ 199 (497)
...+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dikp~Nill~~~~~ 275 (400)
T cd05105 197 ASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN-CVHRDLAARNVLLAQGKI 275 (400)
T ss_pred hhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHhEEEeCCCE
Confidence 134788899999999999999999999 999999999999999999
Q ss_pred eeEcccCCccccCCCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhcccccc
Q 010932 200 PRLSSFGLMKNSRDGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLL 272 (497)
Q Consensus 200 ~kl~Dfgla~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~ 272 (497)
+||+|||+++...... ...+++.|+|||.+.+..++.++|||||||++|||++ |..|++........ ..
T Consensus 276 ~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~----~~ 351 (400)
T cd05105 276 VKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTF----YN 351 (400)
T ss_pred EEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHH----HH
Confidence 9999999987543221 2345678999999998889999999999999999997 77776543211111 11
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 273 LMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 273 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
.+........+...+..+.+++.+||+.||++|||+.+|.+.|+.+.
T Consensus 352 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 352 KIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred HHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 11111122334456778999999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-41 Score=329.48 Aligned_cols=253 Identities=18% Similarity=0.244 Sum_probs=204.1
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-Cc----EEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NR----LVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~----~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
.++.+++.||+|+||+||+|.+.. |. .||||+++.... ...+.+.+|+.+++.++||||++++|++... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 346778888999999999998643 44 489999875432 2356789999999999999999999999764 5789
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK 215 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 215 (497)
|+||+++|+|.+++... ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++......
T Consensus 86 v~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~-iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 163 (316)
T cd05108 86 ITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEERR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE 163 (316)
T ss_pred eeecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEecCCCcEEEccccccccccCCC
Confidence 99999999999998653 456899999999999999999999999 9999999999999999999999999998654322
Q ss_pred c------cccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHH
Q 010932 216 S------YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288 (497)
Q Consensus 216 ~------~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (497)
. ..++..|+|||++.+..++.++|||||||++|||++ |..|+.......+ ............+..++.
T Consensus 164 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 238 (316)
T cd05108 164 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-----SSILEKGERLPQPPICTI 238 (316)
T ss_pred cceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHhCCCCCCCCCCCCH
Confidence 1 223567999999999999999999999999999998 8877654332221 111111122223344567
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHhhhhhccc
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQT 322 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~ 322 (497)
.+.+++.+||+.||.+|||+.+++..|..+....
T Consensus 239 ~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 239 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 7999999999999999999999999998886554
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-43 Score=339.04 Aligned_cols=256 Identities=20% Similarity=0.252 Sum_probs=212.1
Q ss_pred HHHHhcCCCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCc
Q 010932 54 LRAATNGFSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132 (497)
Q Consensus 54 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 132 (497)
+....|--+.++||+.||-|+||+||++..++ +-..|.|++...+....+.|+-|+++|..+.||+||++++.|...+.
T Consensus 24 v~rdlnP~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enk 103 (1187)
T KOG0579|consen 24 VYRDLNPRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENK 103 (1187)
T ss_pred HhccCCHHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCc
Confidence 33344444567899999999999999999876 66778899988777778899999999999999999999999999999
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
+||+.|||.||....++... +..|++.++..++.|++.||.|||+++ |||||||..|||++-+|.++|+|||.+-...
T Consensus 104 LwiliEFC~GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~~-iIHRDLKAGNiL~TldGdirLADFGVSAKn~ 181 (1187)
T KOG0579|consen 104 LWILIEFCGGGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQN-IIHRDLKAGNILLTLDGDIRLADFGVSAKNK 181 (1187)
T ss_pred eEEEEeecCCchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhcc-hhhhhccccceEEEecCcEeeecccccccch
Confidence 99999999999998877653 678999999999999999999999999 9999999999999999999999999876433
Q ss_pred ----CCCccccCCCCCCccccc-----cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCC
Q 010932 213 ----DGKSYSTNLAYTPPEFLR-----TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA 283 (497)
Q Consensus 213 ----~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (497)
...++.|||+|||||+.. ..+|+.++||||||++|.||..+.+|-... ..++.-.-...-++. ..--|
T Consensus 182 ~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhel--npMRVllKiaKSePP-TLlqP 258 (1187)
T KOG0579|consen 182 STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHEL--NPMRVLLKIAKSEPP-TLLQP 258 (1187)
T ss_pred hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcccc--chHHHHHHHhhcCCC-cccCc
Confidence 235789999999999875 467999999999999999999999653221 111111001111111 11236
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 284 NEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 284 ~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..++..+.+|+.+||.+||..||++.++++|
T Consensus 259 S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 259 SHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred chhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 7788999999999999999999999999986
|
|
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-41 Score=319.84 Aligned_cols=248 Identities=21% Similarity=0.320 Sum_probs=205.7
Q ss_pred cccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 142 (497)
.+.+++.+|+|++|.||+|...+++.||||.++... ...+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (261)
T cd05068 7 SIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKY 85 (261)
T ss_pred heeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccC
Confidence 456778889999999999998778889999987543 2456799999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC--cccc-
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SYST- 219 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--~~~g- 219 (497)
++|.+++.......+++..+..++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++...... ...+
T Consensus 86 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 164 (261)
T cd05068 86 GSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN-YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGA 164 (261)
T ss_pred CcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCC
Confidence 99999997644557999999999999999999999999 9999999999999999999999999987654321 1122
Q ss_pred --CCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 220 --NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 220 --t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
+..|+|||++.+..++.++||||||+++|+|+| |+.||.......... .+........+...+..+.+++.+
T Consensus 165 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~ 239 (261)
T cd05068 165 KFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQ-----QVDQGYRMPCPPGCPKELYDIMLD 239 (261)
T ss_pred cCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH-----HHHcCCCCCCCCcCCHHHHHHHHH
Confidence 357999999998899999999999999999999 877765432221111 111111222344567789999999
Q ss_pred hcccCCCCCCCHHHHHHHhhh
Q 010932 297 CLQYEAKDRPDVKFLLSAVAP 317 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~l~~ 317 (497)
||+.+|++||++.++++.|+.
T Consensus 240 ~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 240 CWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred HhhcCcccCCCHHHHHHHHhc
Confidence 999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-41 Score=323.94 Aligned_cols=248 Identities=22% Similarity=0.319 Sum_probs=203.6
Q ss_pred cccccccCCCCCCcEEEEEEEcC------CcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
.+.+++.+|+|+||.||+|.+.+ +..||||+++..... ..+.+.+|+++|+.++||||+++++++......++
T Consensus 6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 85 (280)
T cd05049 6 TIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIM 85 (280)
T ss_pred HhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEE
Confidence 45677888999999999998643 478999999765443 34689999999999999999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEc
Q 010932 136 VAQYMPNDTLSKHLFHWD------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLS 203 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~ 203 (497)
||||+++++|.+++.... ...+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+
T Consensus 86 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~kl~ 164 (280)
T cd05049 86 VFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH-FVHRDLATRNCLVGYDLVVKIG 164 (280)
T ss_pred EEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eeccccccceEEEcCCCeEEEC
Confidence 999999999999996432 245889999999999999999999999 9999999999999999999999
Q ss_pred ccCCccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhcccccccccc
Q 010932 204 SFGLMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDS 276 (497)
Q Consensus 204 Dfgla~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~ 276 (497)
|||+++..... ....+++.|+|||++.+..++.++|||||||++|||++ |..||........... +..
T Consensus 165 d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~-----~~~ 239 (280)
T cd05049 165 DFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIEC-----ITQ 239 (280)
T ss_pred CcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH-----HHc
Confidence 99998754221 22334678999999999999999999999999999998 8887754332221111 111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 010932 277 SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 277 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~ 316 (497)
......+...+..+.+++.+||+.||++|||+.++++.|+
T Consensus 240 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 240 GRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 1122233446678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=330.62 Aligned_cols=236 Identities=19% Similarity=0.258 Sum_probs=193.3
Q ss_pred cCCCCCCcEEEEEEEcC-CcEEEEEEccCCC---CCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 69 ESGDKAPNVVYRGRLKN-NRLVAIKRFSRQS---WPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
.||+|+||+||+|...+ ++.||||+++... ....+.+..|..++..+ +||||+++++++......++||||++||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg 81 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 46999999999999764 8899999997532 22344566677777654 7999999999999999999999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC----CCcccc
Q 010932 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----GKSYST 219 (497)
Q Consensus 144 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~g 219 (497)
+|..++.. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~g 158 (316)
T cd05592 82 DLMFHIQS--SGRFDEARARFYAAEIICGLQFLHKKG-IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCG 158 (316)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccC
Confidence 99998865 457999999999999999999999999 99999999999999999999999999875322 234568
Q ss_pred CCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcc
Q 010932 220 NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299 (497)
Q Consensus 220 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 299 (497)
|+.|+|||++.+..++.++|||||||++|+|++|+.||........... +.. ....++...+..+.+|+.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~----i~~--~~~~~~~~~~~~~~~ll~~~l~ 232 (316)
T cd05592 159 TPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDS----ILN--DRPHFPRWISKEAKDCLSKLFE 232 (316)
T ss_pred CccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHH----HHc--CCCCCCCCCCHHHHHHHHHHcc
Confidence 9999999999988899999999999999999999998865433222111 111 1223345567789999999999
Q ss_pred cCCCCCCCHH-HHHH
Q 010932 300 YEAKDRPDVK-FLLS 313 (497)
Q Consensus 300 ~dp~~Rps~~-~ll~ 313 (497)
.||.+||++. ++++
T Consensus 233 ~~P~~R~~~~~~l~~ 247 (316)
T cd05592 233 RDPTKRLGVDGDIRQ 247 (316)
T ss_pred CCHHHcCCChHHHHc
Confidence 9999999875 5544
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-41 Score=322.51 Aligned_cols=243 Identities=19% Similarity=0.248 Sum_probs=195.2
Q ss_pred CCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC---ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCCh
Q 010932 70 SGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP---DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTL 145 (497)
Q Consensus 70 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 145 (497)
||+|+||.||++..+ +|+.||+|++...... ....+..|++++++++||||+++++++..+.+.++||||++|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 599999999999975 4999999998643221 234566799999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC---ccccCCC
Q 010932 146 SKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK---SYSTNLA 222 (497)
Q Consensus 146 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---~~~gt~~ 222 (497)
..++.......+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ...+|+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD-IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNG 159 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCC
Confidence 98886655567999999999999999999999999 9999999999999999999999999987654332 3467899
Q ss_pred CCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCC
Q 010932 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302 (497)
Q Consensus 223 y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 302 (497)
|+|||++.+..++.++|||||||++|+|++|+.|+...................... ......+.++.+|+.+||+.||
T Consensus 160 y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~~P 238 (277)
T cd05607 160 YMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVK-FEHQNFTEESKDICRLFLAKKP 238 (277)
T ss_pred ccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccc-cccccCCHHHHHHHHHHhccCH
Confidence 999999998889999999999999999999998875432111100000111111111 1112356779999999999999
Q ss_pred CCCCCHHHHHHH
Q 010932 303 KDRPDVKFLLSA 314 (497)
Q Consensus 303 ~~Rps~~~ll~~ 314 (497)
++||+++++++.
T Consensus 239 ~~R~~~~~~~~~ 250 (277)
T cd05607 239 EDRLGSREKNDD 250 (277)
T ss_pred hhCCCCccchhh
Confidence 999999766543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=332.98 Aligned_cols=242 Identities=19% Similarity=0.220 Sum_probs=198.8
Q ss_pred ccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCC---CCChhHHHHHHHHhccCCC-CcceeeeeeeeeCCceEEEEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVRH-KRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e 138 (497)
+.+++.||+|+||.||+|...+ ++.||||++.... ....+.+..|+.++..++| ++|+.+++++...+..++|||
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 81 (324)
T ss_pred ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence 5678889999999999999764 7899999997532 2234678889999999976 468889999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC----C
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----G 214 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~ 214 (497)
|+++|+|..++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++..... .
T Consensus 82 ~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (324)
T cd05587 82 YVNGGDLMYHIQQ--VGKFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTT 158 (324)
T ss_pred CCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCce
Confidence 9999999998865 467899999999999999999999999 99999999999999999999999999874321 2
Q ss_pred CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHH
Q 010932 215 KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 294 (497)
....||+.|+|||++.+..++.++|||||||++|+|+||+.||........... +.. ....++...+..+.+++
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~----i~~--~~~~~~~~~~~~~~~li 232 (324)
T cd05587 159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQS----IME--HNVSYPKSLSKEAVSIC 232 (324)
T ss_pred eeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHH----HHc--CCCCCCCCCCHHHHHHH
Confidence 245689999999999999999999999999999999999998865432221111 111 11234455677899999
Q ss_pred HHhcccCCCCCCCH-----HHHHHH
Q 010932 295 SKCLQYEAKDRPDV-----KFLLSA 314 (497)
Q Consensus 295 ~~cl~~dp~~Rps~-----~~ll~~ 314 (497)
.+||+.||.+|++. .+++++
T Consensus 233 ~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 233 KGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred HHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 99999999999976 566654
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=332.89 Aligned_cols=241 Identities=20% Similarity=0.269 Sum_probs=195.1
Q ss_pred cCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC---CChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 69 ESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW---PDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
.||+|+||+||++..+ +++.||+|+++.... .....+.+|+.++.++ +||||+++++++...+..++||||++++
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~ 81 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG 81 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCC
Confidence 4699999999999976 488999999976422 2235678899888776 7999999999999999999999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC----CCcccc
Q 010932 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----GKSYST 219 (497)
Q Consensus 144 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~g 219 (497)
+|..++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (329)
T cd05618 82 DLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG 158 (329)
T ss_pred CHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccC
Confidence 99988864 467999999999999999999999999 99999999999999999999999999875321 234568
Q ss_pred CCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc----ccc-cccccccCCCCCHHHHHHHHHHH
Q 010932 220 NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK----NLL-LLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 220 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~l~~li 294 (497)
|+.|+|||++.+..++.++|||||||++|+|++|+.||........... ... .+.. ....+|...+..+.+|+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~~~~~~~~ll 236 (329)
T cd05618 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRSLSVKAASVL 236 (329)
T ss_pred CccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc--CCCCCCCCCCHHHHHHH
Confidence 9999999999999999999999999999999999998742110000000 000 0111 11234556677899999
Q ss_pred HHhcccCCCCCCC------HHHHHHH
Q 010932 295 SKCLQYEAKDRPD------VKFLLSA 314 (497)
Q Consensus 295 ~~cl~~dp~~Rps------~~~ll~~ 314 (497)
.+||+.||++||| +.+++++
T Consensus 237 ~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 237 KSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred HHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 9999999999998 4677765
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=339.34 Aligned_cols=247 Identities=17% Similarity=0.145 Sum_probs=197.7
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC---CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
.+.+++.||.|+||+||++... +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+....++|||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E 81 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME 81 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence 3567888999999999999975 58999999986432 1224568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---- 214 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 214 (497)
|+++|+|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 82 FLPGGDLMTMLIK--YDTFSEDVTRFYMAECVLAIEAVHKLG-FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 9999999999865 467899999999999999999999999 999999999999999999999999998522100
Q ss_pred -----------------------------------------------CccccCCCCCCccccccCCCCcccceeehhhhH
Q 010932 215 -----------------------------------------------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVL 247 (497)
Q Consensus 215 -----------------------------------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l 247 (497)
....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 023589999999999988999999999999999
Q ss_pred HHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCC---CCHHHHHHHh
Q 010932 248 LDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDR---PDVKFLLSAV 315 (497)
Q Consensus 248 ~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R---ps~~~ll~~l 315 (497)
|||++|..||........... +.... ...........+..+.+|+.+||. +|.+| +|+.+++.+-
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~-i~~~~-~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp 306 (377)
T cd05629 239 FECLIGWPPFCSENSHETYRK-IINWR-ETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHP 306 (377)
T ss_pred hhhhcCCCCCCCCCHHHHHHH-HHccC-CccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCC
Confidence 999999998864432211110 10000 001101112356779999999998 67765 5999999873
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=336.95 Aligned_cols=249 Identities=20% Similarity=0.191 Sum_probs=203.3
Q ss_pred cCCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC---CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceE
Q 010932 59 NGFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 59 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 134 (497)
.+...+.+++.||+|+||.||++... +++.||||++.... ......+.+|+.+++.++||||+++++++.+.+..+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 34556788889999999999999976 48999999996432 223456789999999999999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
+||||++||+|.+++.. ..+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++......
T Consensus 120 lv~Ey~~gg~L~~~l~~---~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 120 MVMEYMPGGDLVNLMSN---YDIPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 99999999999998853 46899999999999999999999999 999999999999999999999999998754332
Q ss_pred -----CccccCCCCCCccccccC----CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCC--
Q 010932 215 -----KSYSTNLAYTPPEFLRTG----RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA-- 283 (497)
Q Consensus 215 -----~~~~gt~~y~aPE~~~~~----~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 283 (497)
....||+.|+|||++.+. .++.++|||||||++|||++|+.||.......... .+........++
T Consensus 196 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~----~i~~~~~~~~~~~~ 271 (370)
T cd05596 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS----KIMDHKNSLTFPDD 271 (370)
T ss_pred CcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHH----HHHcCCCcCCCCCc
Confidence 235689999999998753 37889999999999999999999886543322111 111111111122
Q ss_pred HHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHh
Q 010932 284 NEDATQLVELASKCLQYEAKD--RPDVKFLLSAV 315 (497)
Q Consensus 284 ~~~~~~l~~li~~cl~~dp~~--Rps~~~ll~~l 315 (497)
...+..+.+|+.+||+.+|.+ |||+.+++++-
T Consensus 272 ~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~ 305 (370)
T cd05596 272 IEISKQAKDLICAFLTDREVRLGRNGVDEIKSHP 305 (370)
T ss_pred CCCCHHHHHHHHHHccChhhccCCCCHHHHhcCc
Confidence 235778999999999999998 99999999873
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-41 Score=324.17 Aligned_cols=251 Identities=22% Similarity=0.333 Sum_probs=202.8
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-----CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-----NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 134 (497)
++++.+++.||+|+||+||+|.+. ++..|++|.+...... ....+.+|+.+++.++||||+++++++..+...+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence 455678889999999999999852 3678999999754322 2357889999999999999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCC---------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWD---------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGD 199 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~---------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~ 199 (497)
+||||+++++|.+++.... ...+++..+..++.|++.||.|||+++ ++|+||||+|||++.++.
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~nili~~~~~ 162 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF-FVHKDLAARNILIGEQLH 162 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC-eehhccccceEEEcCCCc
Confidence 9999999999999985321 235789999999999999999999999 999999999999999999
Q ss_pred eeEcccCCccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhcccccc
Q 010932 200 PRLSSFGLMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLL 272 (497)
Q Consensus 200 ~kl~Dfgla~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~ 272 (497)
+||+|||+++..... ....++..|+|||++.+..++.++|||||||++|||++ |..||.......+ ..
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~-----~~ 237 (283)
T cd05090 163 VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEV-----IE 237 (283)
T ss_pred EEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-----HH
Confidence 999999999754322 22344667999999988889999999999999999999 7766654322111 11
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhh
Q 010932 273 LMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAP 317 (497)
Q Consensus 273 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~ 317 (497)
.+........+..++..+.+++.+||+.||++||++.+|+++|..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 238 MVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 111111122344566789999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=334.79 Aligned_cols=195 Identities=17% Similarity=0.171 Sum_probs=173.4
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCC-C-----CcceeeeeeeeeCCceEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR-H-----KRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~~~~~~~~~~~~~l 135 (497)
.|.|+..||+|+||.|-+|.+. +++.||||++++... -..+-..|+.+|..|+ | -|+|+++++|...+|.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 5677889999999999999965 599999999987542 3467788999999997 4 479999999999999999
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC--CCeeEcccCCccccCC
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED--GDPRLSSFGLMKNSRD 213 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~--~~~kl~Dfgla~~~~~ 213 (497)
|+|.+ ..+|.++|......+|+...++.++.||+.||.+||+.+ |||+||||+||||.+- ..+||+|||.|+....
T Consensus 266 VfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~-IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q 343 (586)
T KOG0667|consen 266 VFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG-IIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ 343 (586)
T ss_pred eehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCChhheeeccCCcCceeEEecccccccCC
Confidence 99999 678999999877889999999999999999999999999 9999999999999744 4699999999987655
Q ss_pred C-CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCch
Q 010932 214 G-KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSH 260 (497)
Q Consensus 214 ~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~ 260 (497)
. -++.-+..|+|||++.+.+|+.+.||||||||+.||++|.++|++.
T Consensus 344 ~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 344 RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 4 3556678999999999999999999999999999999999888765
|
|
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-41 Score=324.62 Aligned_cols=253 Identities=21% Similarity=0.313 Sum_probs=206.4
Q ss_pred cccccccCCCCCCcEEEEEEEc------CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK------NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
++.+.+.+|.|+||.||++... ++..+++|.+........+.+.+|+.++++++||||+++++++......++|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMV 85 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEE
Confidence 4566778899999999999853 3557999998765544456799999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeE
Q 010932 137 AQYMPNDTLSKHLFHWD--------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRL 202 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl 202 (497)
|||+++++|.+++.... ...+++..++.++.||+.||.|||+++ ++||||||+|||++.++.++|
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~~l 164 (291)
T cd05094 86 FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH-FVHRDLATRNCLVGANLLVKI 164 (291)
T ss_pred EecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEE
Confidence 99999999999986532 235899999999999999999999999 999999999999999999999
Q ss_pred cccCCccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccc
Q 010932 203 SSFGLMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMD 275 (497)
Q Consensus 203 ~Dfgla~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~ 275 (497)
+|||++...... ....++..|+|||++.+..++.++|||||||++|+|+| |..|+.......... .+.
T Consensus 165 ~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~-----~~~ 239 (291)
T cd05094 165 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIE-----CIT 239 (291)
T ss_pred CCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHh
Confidence 999998754332 22345678999999998899999999999999999999 877764432221111 111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 276 SSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 276 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
.......+...+..+.+++.+||+.||++|||+.+|++.|+.+...
T Consensus 240 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 240 QGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred CCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 1111122334567899999999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=333.85 Aligned_cols=246 Identities=19% Similarity=0.226 Sum_probs=198.3
Q ss_pred ccccccCCCCCCcEEEEEEEc----CCcEEEEEEccCCC----CCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceE
Q 010932 64 ELIVSESGDKAPNVVYRGRLK----NNRLVAIKRFSRQS----WPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 134 (497)
+.+++.||+|+||+||++... +|+.||+|++.... ....+.+.+|+.++..+ +||||+.+++++...+..+
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH 81 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence 467888999999999999853 48899999986432 12245688999999999 5999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
+||||+++|+|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 82 lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 82 LILDYVSGGEMFTHLYQ--RDNFSEDEVRFYSGEIILALEHLHKLG-IVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHeEECCCCCEEEeeCcCCcccccc
Confidence 99999999999999865 567999999999999999999999999 999999999999999999999999998753221
Q ss_pred -----CccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHH
Q 010932 215 -----KSYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288 (497)
Q Consensus 215 -----~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (497)
....||+.|+|||++.+. .++.++|||||||++|||+||+.||...............+. .....++...+.
T Consensus 159 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 236 (332)
T cd05614 159 EKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRIL--KCDPPFPSFIGP 236 (332)
T ss_pred CCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHh--cCCCCCCCCCCH
Confidence 235689999999999865 478899999999999999999998753211100000000011 011233445677
Q ss_pred HHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 010932 289 QLVELASKCLQYEAKDRP-----DVKFLLSA 314 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rp-----s~~~ll~~ 314 (497)
.+.+++.+||+.||++|| ++++++++
T Consensus 237 ~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 237 EAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred HHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 899999999999999999 78888876
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=330.58 Aligned_cols=237 Identities=18% Similarity=0.208 Sum_probs=194.7
Q ss_pred cCCCCCCcEEEEEEEc-CCcEEEEEEccCCC---CCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 69 ESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS---WPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
.||+|+||.||++.++ +|+.||||+++... ....+.+..|..++... +||||+++++++.+.+..++||||+.++
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g 81 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCC
Confidence 4799999999999986 48999999997532 22345677788888754 8999999999999999999999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC----CCcccc
Q 010932 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----GKSYST 219 (497)
Q Consensus 144 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~g 219 (497)
+|..++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.++|+|||+++.... .....|
T Consensus 82 ~L~~~i~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (316)
T cd05620 82 DLMFHIQD--KGRFDLYRATFYAAEIVCGLQFLHSKG-IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCG 158 (316)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCC
Confidence 99998865 467899999999999999999999999 99999999999999999999999999874321 234568
Q ss_pred CCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcc
Q 010932 220 NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299 (497)
Q Consensus 220 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 299 (497)
|+.|+|||++.+..++.++|||||||++|||++|+.||............ .. ....++...+.++.+|+.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~li~~~l~ 232 (316)
T cd05620 159 TPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESI----RV--DTPHYPRWITKESKDILEKLFE 232 (316)
T ss_pred CcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH----Hh--CCCCCCCCCCHHHHHHHHHHcc
Confidence 99999999999999999999999999999999999988654332221110 00 1122344466789999999999
Q ss_pred cCCCCCCCHH-HHHHH
Q 010932 300 YEAKDRPDVK-FLLSA 314 (497)
Q Consensus 300 ~dp~~Rps~~-~ll~~ 314 (497)
.||++||++. +++++
T Consensus 233 ~dP~~R~~~~~~~~~h 248 (316)
T cd05620 233 RDPTRRLGVVGNIRGH 248 (316)
T ss_pred CCHHHcCCChHHHHcC
Confidence 9999999985 55543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-41 Score=317.92 Aligned_cols=247 Identities=22% Similarity=0.331 Sum_probs=202.2
Q ss_pred CcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
.++.+++.+|+|+||+||++.+.++..||||.+.... ...+.+.+|+.++++++||||+++++++......++||||+.
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 3567788899999999999998777779999987543 345679999999999999999999999998888999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-----c
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK-----S 216 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 216 (497)
+++|.+++... ...+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||.++...... .
T Consensus 83 ~~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05113 83 NGCLLNYLREH-GKRFQPSQLLEMCKDVCEGMAYLESKQ-FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVG 160 (256)
T ss_pred CCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCCEEECCCccceecCCCceeecCC
Confidence 99999998653 347899999999999999999999999 9999999999999999999999999987543322 1
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
..++..|+|||.+.+..++.++|||||||++|+|++ |..|+............ ........+...+..+.+++.
T Consensus 161 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~li~ 235 (256)
T cd05113 161 SKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKV-----SQGLRLYRPHLASEKVYAIMY 235 (256)
T ss_pred CccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH-----hcCCCCCCCCCCCHHHHHHHH
Confidence 234567999999998889999999999999999999 87776443222111111 111111223335678999999
Q ss_pred HhcccCCCCCCCHHHHHHHhh
Q 010932 296 KCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~l~ 316 (497)
+||+.||.+|||+.+|+..|+
T Consensus 236 ~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 236 SCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHcCCCcccCCCHHHHHHhhC
Confidence 999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=332.72 Aligned_cols=238 Identities=20% Similarity=0.246 Sum_probs=196.6
Q ss_pred ccCCCCCCcEEEEEEE----cCCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 68 SESGDKAPNVVYRGRL----KNNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
+.||+|+||.||++.. .+|+.||+|++..... .....+.+|+++|++++||||+++++++......++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 4679999999999875 2488999999975332 234567889999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----Ccc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KSY 217 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 217 (497)
+++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ...
T Consensus 82 ~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 158 (318)
T cd05582 82 GGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 158 (318)
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecc
Confidence 9999999865 457999999999999999999999999 999999999999999999999999998754332 235
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHh
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKC 297 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 297 (497)
.||+.|+|||++.+..++.++|||||||++|+|++|+.||........... +... ....+...+..+.+|+.+|
T Consensus 159 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~----i~~~--~~~~p~~~~~~~~~li~~~ 232 (318)
T cd05582 159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTM----ILKA--KLGMPQFLSPEAQSLLRAL 232 (318)
T ss_pred cCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHH----HHcC--CCCCCCCCCHHHHHHHHHH
Confidence 689999999999988899999999999999999999998865432221111 1111 1123445677899999999
Q ss_pred cccCCCCCCC-----HHHHHHH
Q 010932 298 LQYEAKDRPD-----VKFLLSA 314 (497)
Q Consensus 298 l~~dp~~Rps-----~~~ll~~ 314 (497)
|+.||++||| +.+++.+
T Consensus 233 l~~~P~~R~~a~~~~~~~~~~~ 254 (318)
T cd05582 233 FKRNPANRLGAGPDGVEEIKRH 254 (318)
T ss_pred hhcCHhHcCCCCCCCHHHHhCC
Confidence 9999999999 5556554
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=331.01 Aligned_cols=242 Identities=19% Similarity=0.222 Sum_probs=198.8
Q ss_pred ccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCC---CChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSW---PDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 138 (497)
+.+++.||+|+||.||+|.... ++.||||++..... ...+.+..|..++..+ +|++|+.+++++...+..++|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05616 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME 81 (323)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence 4677888999999999999764 88999999875422 2234567788888777 58999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC----C
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----G 214 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~ 214 (497)
|+++|+|..++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.... .
T Consensus 82 ~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~ 158 (323)
T cd05616 82 YVNGGDLMYQIQQ--VGRFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTT 158 (323)
T ss_pred CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEecCCCHHHeEECCCCcEEEccCCCceecCCCCCcc
Confidence 9999999998865 457899999999999999999999999 99999999999999999999999999875321 2
Q ss_pred CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHH
Q 010932 215 KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 294 (497)
....||+.|+|||++.+..++.++|||||||++|||+||+.||........... +... ...++...+.++.+++
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~s~~~~~li 232 (323)
T cd05616 159 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS----IMEH--NVAYPKSMSKEAVAIC 232 (323)
T ss_pred ccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHH----HHhC--CCCCCCcCCHHHHHHH
Confidence 345689999999999999999999999999999999999998865433322111 1111 1234455677899999
Q ss_pred HHhcccCCCCCCCH-----HHHHHH
Q 010932 295 SKCLQYEAKDRPDV-----KFLLSA 314 (497)
Q Consensus 295 ~~cl~~dp~~Rps~-----~~ll~~ 314 (497)
.+||+.||.+|++. .+++++
T Consensus 233 ~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 233 KGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred HHHcccCHHhcCCCCCCCHHHHhcC
Confidence 99999999999974 566554
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=329.64 Aligned_cols=236 Identities=20% Similarity=0.245 Sum_probs=193.8
Q ss_pred cCCCCCCcEEEEEEEcC-CcEEEEEEccCCC---CCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 69 ESGDKAPNVVYRGRLKN-NRLVAIKRFSRQS---WPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
.||+|+||+||+|.+.+ ++.||||+++... ......+..|..++... +||||+++++++.+.+..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g 81 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence 57999999999999764 8899999997542 22345577788888764 8999999999999999999999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC----CCcccc
Q 010932 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----GKSYST 219 (497)
Q Consensus 144 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~g 219 (497)
+|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (316)
T cd05619 82 DLMFHIQS--CHKFDLPRATFYAAEIICGLQFLHSKG-IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCG 158 (316)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecC
Confidence 99999864 457899999999999999999999999 99999999999999999999999999875321 234568
Q ss_pred CCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcc
Q 010932 220 NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299 (497)
Q Consensus 220 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 299 (497)
|+.|+|||++.+..++.++|||||||++|+|++|+.||........... +.. ....++...+..+.+|+.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~-----i~~-~~~~~~~~~~~~~~~li~~~l~ 232 (316)
T cd05619 159 TPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQS-----IRM-DNPCYPRWLTREAKDILVKLFV 232 (316)
T ss_pred CccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHH-----HHh-CCCCCCccCCHHHHHHHHHHhc
Confidence 9999999999988999999999999999999999998865432221111 000 0112334466789999999999
Q ss_pred cCCCCCCCHH-HHHH
Q 010932 300 YEAKDRPDVK-FLLS 313 (497)
Q Consensus 300 ~dp~~Rps~~-~ll~ 313 (497)
.||++||++. ++++
T Consensus 233 ~~P~~R~~~~~~l~~ 247 (316)
T cd05619 233 REPERRLGVKGDIRQ 247 (316)
T ss_pred cCHhhcCCChHHHHc
Confidence 9999999997 5554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=309.93 Aligned_cols=241 Identities=17% Similarity=0.252 Sum_probs=209.2
Q ss_pred cccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 65 LIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
.++++||.|+||.||++.++. |+.||||.+.... +.+++.+|+.+|+++..|+||++||.+.....+|+|||||-.|
T Consensus 36 Di~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAG 113 (502)
T KOG0574|consen 36 DIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAG 113 (502)
T ss_pred HHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCC
Confidence 467889999999999999875 9999999987644 6889999999999999999999999999999999999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----Ccccc
Q 010932 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KSYST 219 (497)
Q Consensus 144 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~g 219 (497)
++.+.++. .+.++++..+..|++.-+.||.|||... -||||||..|||++-+|..||+|||.+....+. .+..|
T Consensus 114 SiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~~-KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIG 191 (502)
T KOG0574|consen 114 SISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDLK-KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIG 191 (502)
T ss_pred cHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHHH-HHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCcccc
Confidence 99999876 4779999999999999999999999987 899999999999999999999999998765443 56789
Q ss_pred CCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccc--cccCCCCCHHHHHHHHHHHHHh
Q 010932 220 NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMD--SSLEGQYANEDATQLVELASKC 297 (497)
Q Consensus 220 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~c 297 (497)
||.|||||++..-.|+.++||||||++..||..|++|+... ...+....+. +...-..|..++.++-+|+++|
T Consensus 192 TPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDI-----HPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~C 266 (502)
T KOG0574|consen 192 TPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDI-----HPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSC 266 (502)
T ss_pred CcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccc-----cccceeEeccCCCCCCCCChHhhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999765321 1111111222 2222234677899999999999
Q ss_pred cccCCCCCCCHHHHHHH
Q 010932 298 LQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 298 l~~dp~~Rps~~~ll~~ 314 (497)
|.++|++|-|+-+++++
T Consensus 267 LiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 267 LIKKPEERKTALRLCEH 283 (502)
T ss_pred hcCCHHHHHHHHHHhhh
Confidence 99999999999999986
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-41 Score=336.14 Aligned_cols=244 Identities=20% Similarity=0.189 Sum_probs=195.2
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
-..|.+++.||.|+||.||++... +++.||||.... ..+.+|+++|++++||||+++++++......++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 356788999999999999999975 589999997542 3578999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC-----C
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD-----G 214 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-----~ 214 (497)
+. ++|..++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .
T Consensus 165 ~~-~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~ylH~~~-IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~ 240 (391)
T PHA03212 165 YK-TDLYCYLAA--KRNIAICDILAIERSVLRAIQYLHENR-IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKY 240 (391)
T ss_pred CC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHhEEEcCCCCEEEEeCCccccccccccccc
Confidence 85 678888754 457899999999999999999999999 99999999999999999999999999874322 1
Q ss_pred CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhh--------HH----Hhc-------------cc
Q 010932 215 KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHAL--------DV----IRG-------------KN 269 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~--------~~----~~~-------------~~ 269 (497)
....||+.|+|||++.+..++.++|||||||++|||++|..|+..... .. +.. ..
T Consensus 241 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~ 320 (391)
T PHA03212 241 YGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQAN 320 (391)
T ss_pred ccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHH
Confidence 235789999999999988999999999999999999999977643210 00 000 00
Q ss_pred ccccc----c-----cccCCCC--CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 270 LLLLM----D-----SSLEGQY--ANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 270 ~~~~~----~-----~~~~~~~--~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..... . +...... ....+.++.+|+.+||+.||++|||+.+++++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 321 LDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred HHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00000 0 0000000 01246689999999999999999999999975
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-43 Score=306.60 Aligned_cols=246 Identities=20% Similarity=0.181 Sum_probs=205.9
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCC--CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQ--SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
+.+-..||+|.|+.|+++.+. +|+.+|+|++... +..+.+.+.+|+.+-+.|+|||||++...+......+||+|++
T Consensus 13 y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m 92 (355)
T KOG0033|consen 13 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV 92 (355)
T ss_pred hhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecc
Confidence 344456799999999999976 4999999988643 2235678999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC---CCCeeEcccCCccccCCCC--
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE---DGDPRLSSFGLMKNSRDGK-- 215 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~~~~-- 215 (497)
.|+.|..-|-. +..+++..+-.+++||+.+|.|+|.++ |||||+||+|+|+.. .--+||+|||++.....+.
T Consensus 93 ~G~dl~~eIV~--R~~ySEa~aSH~~rQiLeal~yCH~n~-IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~ 169 (355)
T KOG0033|consen 93 TGGELFEDIVA--REFYSEADASHCIQQILEALAYCHSNG-IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAW 169 (355)
T ss_pred cchHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeeeeccCCCceeecccceEEEeCCcccc
Confidence 99999877654 356788888999999999999999999 999999999999953 3358999999999777543
Q ss_pred -ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHH
Q 010932 216 -SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 216 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 294 (497)
...|||.|||||++...+|+..+|||+.||+||-|+.|..||++.....+......... ...++..+..+++..+|+
T Consensus 170 ~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~y--d~~~~~w~~is~~Ak~Lv 247 (355)
T KOG0033|consen 170 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAY--DYPSPEWDTVTPEAKSLI 247 (355)
T ss_pred ccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhcccc--CCCCcccCcCCHHHHHHH
Confidence 46789999999999999999999999999999999999999988554444333222222 223334456788999999
Q ss_pred HHhcccCCCCCCCHHHHHHH
Q 010932 295 SKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 295 ~~cl~~dp~~Rps~~~ll~~ 314 (497)
++||..||.+|.|+.|.|++
T Consensus 248 rrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 248 RRMLTVNPKKRITADEALKH 267 (355)
T ss_pred HHHhccChhhhccHHHHhCC
Confidence 99999999999999999986
|
|
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-41 Score=319.06 Aligned_cols=251 Identities=17% Similarity=0.167 Sum_probs=202.5
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
.+++.+++.+|+|+||.||+|... +|+.||+|++..........+.+|+.++++++||||+++++++......++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 356788899999999999999974 5899999999765544556788999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----C
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----K 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 215 (497)
+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... .
T Consensus 88 ~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd06646 88 CGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLAYLHSKG-KMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRK 164 (267)
T ss_pred CCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEECcCccceeecccccccC
Confidence 999999998864 467899999999999999999999999 999999999999999999999999998754322 2
Q ss_pred ccccCCCCCCccccc---cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLR---TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
...+++.|+|||.+. ...++.++|||||||++|||++|+.|+.................... ........+..+.+
T Consensus 165 ~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 243 (267)
T cd06646 165 SFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPP-KLKDKTKWSSTFHN 243 (267)
T ss_pred ccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCC-CCccccccCHHHHH
Confidence 345788999999884 34578899999999999999999987643221110000000000000 00112235678999
Q ss_pred HHHHhcccCCCCCCCHHHHHHHh
Q 010932 293 LASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~l 315 (497)
++.+||+.+|++|||+++++++|
T Consensus 244 li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 244 FVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred HHHHHhhCChhhCcCHHHHhcCC
Confidence 99999999999999999999865
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-41 Score=323.87 Aligned_cols=251 Identities=21% Similarity=0.278 Sum_probs=202.8
Q ss_pred CCcccccccCCCCCCcEEEEEEEcC------CcEEEEEEccCCCCCC-hhHHHHHHHHhccCCCCcceeeeeeeeeCCce
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 133 (497)
++.+.++++||.|+||+||+|.+.+ +..||||+++...... .+.+.+|+.++..++||||+++++++......
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~ 83 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL 83 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence 3456788899999999999998632 5789999997543222 35688999999999999999999999999999
Q ss_pred EEEEEcCCCCChhhhhhcC--------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCC
Q 010932 134 LLVAQYMPNDTLSKHLFHW--------------DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGD 199 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~ 199 (497)
++++||+.+++|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.
T Consensus 84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH-VVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhheEecCCCc
Confidence 9999999999999998531 1235889999999999999999999999 999999999999999999
Q ss_pred eeEcccCCccccCCCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhcccccc
Q 010932 200 PRLSSFGLMKNSRDGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLL 272 (497)
Q Consensus 200 ~kl~Dfgla~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~ 272 (497)
+||+|||+++...... ...+++.|+|||++.++.++.++|||||||++|||++ |..|+.......+ ..
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~-----~~ 237 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV-----IE 237 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HH
Confidence 9999999987543221 2334678999999988889999999999999999998 6655543322211 11
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhh
Q 010932 273 LMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAP 317 (497)
Q Consensus 273 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~ 317 (497)
.+........+..++..+.+|+.+||+.+|++||++.+|+..|+.
T Consensus 238 ~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 238 MIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 111111223455677889999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=330.03 Aligned_cols=237 Identities=20% Similarity=0.260 Sum_probs=197.2
Q ss_pred cCCCCCCcEEEEEEEcC-CcEEEEEEccCCC---CCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 69 ESGDKAPNVVYRGRLKN-NRLVAIKRFSRQS---WPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
.||.|+||+||++.++. ++.||||+++... ......+.+|..++..+ +||||+++++++...+..++||||++++
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG 81 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 47999999999999764 8899999997532 22345678899998877 6999999999999999999999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC----CCcccc
Q 010932 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----GKSYST 219 (497)
Q Consensus 144 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~g 219 (497)
+|..++.. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (318)
T cd05570 82 DLMFHIQR--SGRFDEPRARFYAAEIVLGLQFLHERG-IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCG 158 (318)
T ss_pred CHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceec
Confidence 99988865 457999999999999999999999999 99999999999999999999999999864221 123468
Q ss_pred CCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcc
Q 010932 220 NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299 (497)
Q Consensus 220 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 299 (497)
|+.|+|||++.+..++.++|||||||++|+|++|+.||........... +... ...++...+..+.+|+.+||+
T Consensus 159 ~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~----i~~~--~~~~~~~~~~~~~~li~~~l~ 232 (318)
T cd05570 159 TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQS----ILED--EVRYPRWLSKEAKSILKSFLT 232 (318)
T ss_pred CccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHH----HHcC--CCCCCCcCCHHHHHHHHHHcc
Confidence 8999999999999999999999999999999999998865432222111 1111 112344567789999999999
Q ss_pred cCCCCCCCH-----HHHHHH
Q 010932 300 YEAKDRPDV-----KFLLSA 314 (497)
Q Consensus 300 ~dp~~Rps~-----~~ll~~ 314 (497)
.||++|||+ .+++++
T Consensus 233 ~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 233 KNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred CCHHHcCCCCCCCHHHHhcC
Confidence 999999999 888875
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-41 Score=332.50 Aligned_cols=247 Identities=21% Similarity=0.274 Sum_probs=193.5
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC--CCChhHHHHHHHHhccCCCCcceeeeeeeeeC-----CceEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS--WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG-----DERLL 135 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~l 135 (497)
|.+.+.||+|+||.||+|... +|..||||++.... ......+.+|+.+++.++||||+++++++... ...++
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence 567788999999999999975 58999999987432 22345688999999999999999999988543 24799
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG- 214 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 214 (497)
||||+. ++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 82 v~e~~~-~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 157 (338)
T cd07859 82 VFELME-SDLHQVIKA--NDDLTPEHHQFFLYQLLRALKYIHTAN-VFHRDLKPKNILANADCKLKICDFGLARVAFNDT 157 (338)
T ss_pred EEecCC-CCHHHHHHh--cccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEccCcccccccccc
Confidence 999995 689888864 457999999999999999999999999 999999999999999999999999998753221
Q ss_pred ------CccccCCCCCCcccccc--CCCCcccceeehhhhHHHHhhCCCCCCchhhHHH-------------------hc
Q 010932 215 ------KSYSTNLAYTPPEFLRT--GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVI-------------------RG 267 (497)
Q Consensus 215 ------~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~-------------------~~ 267 (497)
....+|+.|+|||++.+ ..++.++|||||||++|+|+||+.||........ ..
T Consensus 158 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 237 (338)
T cd07859 158 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRN 237 (338)
T ss_pred CccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 23468899999999875 6789999999999999999999988754321100 00
Q ss_pred cccccc---cccccCCCC---CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 268 KNLLLL---MDSSLEGQY---ANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 268 ~~~~~~---~~~~~~~~~---~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
...... +........ .+..++.+.+++.+||+.||++|||+++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 238 EKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred hhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000000 000000000 01235678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=316.90 Aligned_cols=247 Identities=22% Similarity=0.346 Sum_probs=204.7
Q ss_pred cccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 142 (497)
.++++++||+|+||.||+|..++++.||+|.+..... ....+.+|+.+++.++||||+++++++. .+..+++|||+++
T Consensus 7 ~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~ 84 (260)
T cd05067 7 TLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYMEN 84 (260)
T ss_pred HceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCCC
Confidence 4678889999999999999988889999999875443 4568999999999999999999999874 4578999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-----Ccc
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-----KSY 217 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~~ 217 (497)
++|.+++....+..+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ...
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 163 (260)
T cd05067 85 GSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGA 163 (260)
T ss_pred CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCC
Confidence 99999987655668999999999999999999999999 999999999999999999999999998755422 122
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
.++..|+|||++.+..++.++||||||+++|+|++ |+.|+.......... .+........+...+..+.+++.+
T Consensus 164 ~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~ 238 (260)
T cd05067 164 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQ-----NLERGYRMPRPDNCPEELYELMRL 238 (260)
T ss_pred cccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHH-----HHHcCCCCCCCCCCCHHHHHHHHH
Confidence 34578999999998889999999999999999999 887775433222111 111112223344456789999999
Q ss_pred hcccCCCCCCCHHHHHHHhhh
Q 010932 297 CLQYEAKDRPDVKFLLSAVAP 317 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~l~~ 317 (497)
||..+|++|||+++++..|+.
T Consensus 239 ~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 239 CWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HccCChhhCCCHHHHHHHhhc
Confidence 999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=314.15 Aligned_cols=241 Identities=24% Similarity=0.300 Sum_probs=189.7
Q ss_pred ccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCC-----ceEEEEEcCC
Q 010932 68 SESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD-----ERLLVAQYMP 141 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e~~~ 141 (497)
+.+|.|+||.||+|.... ++.||||....... --.+|+++|+.+.|||||++.-+|.... ...+||||++
T Consensus 30 ~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP 105 (364)
T KOG0658|consen 30 RLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMP 105 (364)
T ss_pred EEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhch
Confidence 445999999999999754 79999998765432 2347999999999999999998886532 3568999996
Q ss_pred CCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC-CCeeEcccCCccccCCCC---
Q 010932 142 NDTLSKHLFH--WDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED-GDPRLSSFGLMKNSRDGK--- 215 (497)
Q Consensus 142 ~~~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~~~~--- 215 (497)
.+|.++++. ..+..++...+.-+..||++||.|||+.| |+||||||.|+|+|.+ |.+||||||.|+....+.
T Consensus 106 -~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~-IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epni 183 (364)
T KOG0658|consen 106 -ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG-ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNI 183 (364)
T ss_pred -HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC-cccCCCChheEEEcCCCCeEEeccCCcceeeccCCCce
Confidence 578888863 12567888899999999999999999998 9999999999999955 999999999999765443
Q ss_pred ccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHH----------------hccc-------cc
Q 010932 216 SYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVI----------------RGKN-------LL 271 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~----------------~~~~-------~~ 271 (497)
++.-|..|+|||.+.+ ..|+.+.||||.|||+.||+-|++.|++...... .... ..
T Consensus 184 SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p 263 (364)
T KOG0658|consen 184 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFP 263 (364)
T ss_pred eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCc
Confidence 4556889999999987 5699999999999999999999999887521111 0000 01
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 272 LLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+....+..-+....++++.+|+.++|+.+|.+|.++.+++.+
T Consensus 264 ~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 264 QIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred ccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 1111111111334567889999999999999999999999985
|
|
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=316.79 Aligned_cols=247 Identities=22% Similarity=0.341 Sum_probs=203.7
Q ss_pred cccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 142 (497)
++.+++++|.|+||.||++...++..||+|.+..... ..+.+.+|+.++++++|+||+++++++. ....+++|||+++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~ 84 (260)
T cd05070 7 SLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSK 84 (260)
T ss_pred HhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCC
Confidence 4577888999999999999988888899999976443 4567999999999999999999999875 4568999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-----cc
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK-----SY 217 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 217 (497)
++|.+++.......+++..+..++.+++.||.|||+.+ ++|+||||+||++++++.++|+|||++....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 163 (260)
T cd05070 85 GSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN-YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGA 163 (260)
T ss_pred CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCC
Confidence 99999997654567899999999999999999999999 9999999999999999999999999987543321 12
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
.++..|+|||++.+..++.++||||||+++|+|++ |..||......... ..+......+.+...+..+.+|+.+
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~ 238 (260)
T cd05070 164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVL-----EQVERGYRMPCPQDCPISLHELMLQ 238 (260)
T ss_pred CCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHH-----HHHHcCCCCCCCCcCCHHHHHHHHH
Confidence 34567999999988889999999999999999999 77666543221111 1111122223445567789999999
Q ss_pred hcccCCCCCCCHHHHHHHhhh
Q 010932 297 CLQYEAKDRPDVKFLLSAVAP 317 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~l~~ 317 (497)
||+.+|++|||+.++++.|+.
T Consensus 239 ~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 239 CWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HcccCcccCcCHHHHHHHHhc
Confidence 999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-41 Score=323.76 Aligned_cols=252 Identities=18% Similarity=0.241 Sum_probs=210.4
Q ss_pred cccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCC-hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 65 LIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
.+.++||+|-||.|.++....+..||||.++...... +..|.+|+++|.+++|||||+++|+|..++.++||+||+++|
T Consensus 541 ~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnG 620 (807)
T KOG1094|consen 541 RFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENG 620 (807)
T ss_pred ehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcC
Confidence 4557899999999999999778999999999876555 478999999999999999999999999999999999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCc------c
Q 010932 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS------Y 217 (497)
Q Consensus 144 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~------~ 217 (497)
+|.+++..+..+.+.-....+|+.||+.|++||.+.+ +|||||.+.|+|++.++++||+|||.++..-.+.. .
T Consensus 621 DLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n-fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~ 699 (807)
T KOG1094|consen 621 DLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN-FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRA 699 (807)
T ss_pred cHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc-hhhccccccceeecCcccEEecCcccccccccCCceeeecce
Confidence 9999998765555566677889999999999999999 99999999999999999999999999996655432 2
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhh--CCCCCCchhhHHHhccccccccccc---cCCCCCHHHHHHHHH
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS--GKHIPPSHALDVIRGKNLLLLMDSS---LEGQYANEDATQLVE 292 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt--g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~ 292 (497)
.-.+.|||||.+.-++++.+||||+||++|||+++ ...|+.....+.+... ...+++.. .....|.-++..+.+
T Consensus 700 vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven-~~~~~~~~~~~~~l~~P~~cp~~lye 778 (807)
T KOG1094|consen 700 VLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVEN-AGEFFRDQGRQVVLSRPPACPQGLYE 778 (807)
T ss_pred eeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHh-hhhhcCCCCcceeccCCCcCcHHHHH
Confidence 33579999999999999999999999999999865 4456544333322221 12222221 222346678889999
Q ss_pred HHHHhcccCCCCCCCHHHHHHHhhhh
Q 010932 293 LASKCLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
++.+||..|..+|||++++...|+..
T Consensus 779 lml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 779 LMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred HHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 99999999999999999999988764
|
|
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=317.19 Aligned_cols=254 Identities=19% Similarity=0.254 Sum_probs=206.5
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC---hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
+.+.+.+.+|.|+||.||+|... +++.||||.+....... ...+.+|+.+++.++||||+++++++...+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 34567788899999999999975 58999999886533222 346889999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC
Q 010932 138 QYMPNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK 215 (497)
Q Consensus 138 e~~~~~~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 215 (497)
||+++++|.+++... ....+++..+..++.||+.||.|||+++ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~ 160 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCCHHHEEEcCCCCEEECccccceeccchh
Confidence 999999999888532 2356899999999999999999999999 9999999999999999999999999987654322
Q ss_pred ----ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccccccc-ccCCCCCHHHHHHH
Q 010932 216 ----SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDS-SLEGQYANEDATQL 290 (497)
Q Consensus 216 ----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 290 (497)
...+++.|+|||.+.+..++.++||||||+++|+|++|+.|+......... ....+.. ......+...+..+
T Consensus 161 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 237 (267)
T cd08228 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFS---LCQKIEQCDYPPLPTEHYSEKL 237 (267)
T ss_pred HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHH---HHHHHhcCCCCCCChhhcCHHH
Confidence 346788999999999888999999999999999999999887543221111 1111111 11111223456789
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 291 VELASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 291 ~~li~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
.+++.+||+.+|++|||+.++++.|++++
T Consensus 238 ~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 238 RELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 99999999999999999999999998864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-41 Score=323.51 Aligned_cols=253 Identities=24% Similarity=0.301 Sum_probs=204.7
Q ss_pred cccccccCCCCCCcEEEEEEEc------CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK------NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
.+.+.+.+|.|+||+||++... ++..+|+|.+........+.+.+|++++++++||||+++++++...+..++|
T Consensus 6 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (288)
T cd05093 6 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV 85 (288)
T ss_pred HeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 4566778899999999999852 2467999998765444456799999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCC-----------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEccc
Q 010932 137 AQYMPNDTLSKHLFHWD-----------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSF 205 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~-----------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Df 205 (497)
|||+++++|.+++.... ...+++..+..++.|++.||.|||+++ ++||||||+|||++.++.++|+||
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~-i~H~dlkp~Nili~~~~~~kl~df 164 (288)
T cd05093 86 FEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDF 164 (288)
T ss_pred EEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEeccC
Confidence 99999999999986421 235899999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhcccccccccccc
Q 010932 206 GLMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSL 278 (497)
Q Consensus 206 gla~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (497)
|+++..... ....+++.|+|||++.+..++.++|||||||++|+|++ |..||........... +. ...
T Consensus 165 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~----i~-~~~ 239 (288)
T cd05093 165 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIEC----IT-QGR 239 (288)
T ss_pred CccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH----HH-cCC
Confidence 998754322 12234678999999998889999999999999999999 7766644322211111 11 111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 279 EGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 279 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
....+...+..+.+|+.+||+.||.+|||+.+++..|+.+...
T Consensus 240 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 240 VLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 1122334567799999999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-41 Score=329.81 Aligned_cols=237 Identities=23% Similarity=0.263 Sum_probs=192.4
Q ss_pred cCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC---CChhHHHHHHH-HhccCCCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 69 ESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW---PDPHQFVTEAA-GLGNVRHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
.||+|+||+||++... +|+.||||++..... .....+..|.. +++.++||||+++++++...+..++||||++++
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g 81 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence 4699999999999976 599999999875321 12334555554 567899999999999999999999999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC----CCcccc
Q 010932 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----GKSYST 219 (497)
Q Consensus 144 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~g 219 (497)
+|..++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~g-ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (323)
T cd05575 82 ELFFHLQR--ERSFPEPRARFYAAEIASALGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCG 158 (323)
T ss_pred CHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccC
Confidence 99998865 567999999999999999999999999 99999999999999999999999999875322 123568
Q ss_pred CCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcc
Q 010932 220 NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299 (497)
Q Consensus 220 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 299 (497)
|+.|+|||++.+..++.++|||||||++|+|++|..||............ ... ....++..+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i----~~~--~~~~~~~~~~~~~~li~~~l~ 232 (323)
T cd05575 159 TPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNI----LNK--PLRLKPNISVSARHLLEGLLQ 232 (323)
T ss_pred ChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHH----HcC--CCCCCCCCCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999988654332221111 111 112233457789999999999
Q ss_pred cCCCCCCCHH----HHHHH
Q 010932 300 YEAKDRPDVK----FLLSA 314 (497)
Q Consensus 300 ~dp~~Rps~~----~ll~~ 314 (497)
.||.+||++. +++++
T Consensus 233 ~~p~~R~~~~~~~~~il~~ 251 (323)
T cd05575 233 KDRTKRLGAKDDFLEIKNH 251 (323)
T ss_pred cCHHhCCCCCCCHHHHHcC
Confidence 9999999874 66553
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-41 Score=330.57 Aligned_cols=253 Identities=20% Similarity=0.307 Sum_probs=201.2
Q ss_pred cccccccCCCCCCcEEEEEEEc------CCcEEEEEEccCCCCC-ChhHHHHHHHHhccC-CCCcceeeeeeeeeC-Cce
Q 010932 63 SELIVSESGDKAPNVVYRGRLK------NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNV-RHKRLVNLIGCCAEG-DER 133 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~-~~~ 133 (497)
.+++++.||.|+||.||+|... +++.||+|+++..... ..+.+.+|+.++.++ +|+||+++++++... ...
T Consensus 8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~ 87 (337)
T cd05054 8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPL 87 (337)
T ss_pred HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCE
Confidence 5678888999999999999742 2578999998754322 235688899999999 899999999988654 568
Q ss_pred EEEEEcCCCCChhhhhhcCC-----------------------------------------------------------C
Q 010932 134 LLVAQYMPNDTLSKHLFHWD-----------------------------------------------------------K 154 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~-----------------------------------------------------------~ 154 (497)
+++|||+++++|.+++.... .
T Consensus 88 ~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (337)
T cd05054 88 MVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYK 167 (337)
T ss_pred EEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhh
Confidence 89999999999999885421 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC------CccccCCCCCCccc
Q 010932 155 QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG------KSYSTNLAYTPPEF 228 (497)
Q Consensus 155 ~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------~~~~gt~~y~aPE~ 228 (497)
..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.++|+|||+++..... ....++..|+|||+
T Consensus 168 ~~l~~~~~~~~~~qi~~aL~~lH~~~-ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~ 246 (337)
T cd05054 168 EPLTLEDLISYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPES 246 (337)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHH
Confidence 26899999999999999999999999 999999999999999999999999999864322 12344678999999
Q ss_pred cccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 010932 229 LRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPD 307 (497)
Q Consensus 229 ~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 307 (497)
+.+..++.++|||||||++|||++ |..||........ ....+........+...+.++.+++.+||+.+|++|||
T Consensus 247 ~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs 322 (337)
T cd05054 247 IFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE----FCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPT 322 (337)
T ss_pred hcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH----HHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcC
Confidence 999999999999999999999998 8877654221111 11111111122233445678999999999999999999
Q ss_pred HHHHHHHhhhhhc
Q 010932 308 VKFLLSAVAPLQK 320 (497)
Q Consensus 308 ~~~ll~~l~~~~~ 320 (497)
+.+++++|+.+.+
T Consensus 323 ~~ell~~l~~~~~ 335 (337)
T cd05054 323 FSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-41 Score=326.98 Aligned_cols=247 Identities=21% Similarity=0.197 Sum_probs=211.5
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCC---ChhHHHHHHHHhccCC-CCcceeeeeeeeeCCceEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWP---DPHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv 136 (497)
..|.+.+.||.|.||+||+++.+. |+.+|+|++.+.... +.+.+.+|+.+|+++. |||||.+++++.+....++|
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lv 114 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLV 114 (382)
T ss_pred ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEE
Confidence 345666789999999999999876 999999999875443 3468999999999998 99999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC----CCCeeEcccCCccccC
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE----DGDPRLSSFGLMKNSR 212 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~----~~~~kl~Dfgla~~~~ 212 (497)
||++.||.|.+.+... .+++..+..++.||+.++.|||+.| ++||||||+|+|+.. ++.+|++|||++....
T Consensus 115 mEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~g-vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~ 190 (382)
T KOG0032|consen 115 MELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLG-VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK 190 (382)
T ss_pred EEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCC-ceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence 9999999999999764 3999999999999999999999999 999999999999963 3579999999999776
Q ss_pred CC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHH
Q 010932 213 DG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQ 289 (497)
Q Consensus 213 ~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (497)
.. ...+||+.|+|||++....|+..+||||+||++|.|++|..||............. ..+.....+..+..+..
T Consensus 191 ~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~--~~~~~f~~~~w~~is~~ 268 (382)
T KOG0032|consen 191 PGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAIL--RGDFDFTSEPWDDISES 268 (382)
T ss_pred CCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHH--cCCCCCCCCCccccCHH
Confidence 53 35789999999999999999999999999999999999999997765333322111 11112333445567889
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 290 LVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 290 l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+.+++++|+..||.+|+|+.++|+|
T Consensus 269 akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 269 AKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred HHHHHHHhcccCcccCCCHHHHhcC
Confidence 9999999999999999999999996
|
|
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-41 Score=332.78 Aligned_cols=246 Identities=20% Similarity=0.199 Sum_probs=200.1
Q ss_pred CCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCC---CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
-..+.+++.||+|+||.||++.+.. ++.||+|++.... ......+.+|+.+++.++||||+++++++.++...++|
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 3567888889999999999999864 8899999986422 22345688999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 214 (497)
|||+++|+|.+++.. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 122 ~Ey~~gg~L~~~l~~---~~~~~~~~~~~~~qil~aL~~LH~~~-IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~ 197 (370)
T cd05621 122 MEYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIHSMG-LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM 197 (370)
T ss_pred EcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEEecccceecccCCc
Confidence 999999999999853 46899999999999999999999999 999999999999999999999999999865332
Q ss_pred ---CccccCCCCCCccccccC----CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCC--HH
Q 010932 215 ---KSYSTNLAYTPPEFLRTG----RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA--NE 285 (497)
Q Consensus 215 ---~~~~gt~~y~aPE~~~~~----~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 285 (497)
....||+.|+|||++.+. .++.++|||||||++|+|++|+.||......... ..+.+......++ ..
T Consensus 198 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~----~~i~~~~~~~~~p~~~~ 273 (370)
T cd05621 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTY----SKIMDHKNSLNFPEDVE 273 (370)
T ss_pred eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHH----HHHHhCCcccCCCCccc
Confidence 245689999999999754 3788999999999999999999988654322211 1111111111222 23
Q ss_pred HHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 010932 286 DATQLVELASKCLQYEAKD--RPDVKFLLSA 314 (497)
Q Consensus 286 ~~~~l~~li~~cl~~dp~~--Rps~~~ll~~ 314 (497)
.+..+.+++.+||+.++.+ |+|+.+++++
T Consensus 274 ~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 274 ISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 5778999999999866554 8899999997
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=316.18 Aligned_cols=245 Identities=24% Similarity=0.336 Sum_probs=200.9
Q ss_pred cccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 142 (497)
++.+.+.+|+|+||.||++.++++..+|+|++..... ....+.+|+.+++.++||||+++++++...+..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 4567788899999999999987777899999865432 346789999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCc-----c
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-----Y 217 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-----~ 217 (497)
++|.+++... ...+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||+++....... .
T Consensus 84 ~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 161 (256)
T cd05059 84 GCLLNYLRER-KGKLGTEWLLDMCSDVCEAMEYLESNG-FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGT 161 (256)
T ss_pred CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHhhEEECCCCcEEECCcccceecccccccccCCC
Confidence 9999998653 347899999999999999999999999 99999999999999999999999999875443221 1
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
.++..|+|||.+.+..++.++||||||+++|+|++ |..|+......... ..+........+...+..+.+++.+
T Consensus 162 ~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~ 236 (256)
T cd05059 162 KFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVV-----ESVSAGYRLYRPKLAPTEVYTIMYS 236 (256)
T ss_pred CCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHH-----HHHHcCCcCCCCCCCCHHHHHHHHH
Confidence 22357999999998899999999999999999999 66665432221111 1111112223344567789999999
Q ss_pred hcccCCCCCCCHHHHHHHh
Q 010932 297 CLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~l 315 (497)
||+.+|++|||+.++++.|
T Consensus 237 cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 237 CWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HhcCChhhCcCHHHHHHHh
Confidence 9999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=315.77 Aligned_cols=240 Identities=18% Similarity=0.275 Sum_probs=197.1
Q ss_pred cCCCCCCcEEEEEEEc---CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 69 ESGDKAPNVVYRGRLK---NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
+||+|+||.||+|.++ ++..||+|+++..... ..+.+.+|+.+++.+.||||+++++++. ....++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 5799999999999753 4789999998754332 2457899999999999999999999885 45679999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCc-------
Q 010932 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS------- 216 (497)
Q Consensus 144 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~------- 216 (497)
+|.+++.. ...+++..+..++.|++.||.|||+++ ++|+||||.||+++.++.+||+|||+++.......
T Consensus 81 ~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05116 81 PLNKFLQK--NKHVTEKNITELVHQVSMGMKYLEETN-FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTH 157 (257)
T ss_pred cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCC
Confidence 99999864 457899999999999999999999999 99999999999999999999999999876443221
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
..+++.|+|||.+....++.++|||||||++|||++ |..||.......+ ...+......+.+..+++.+.+||.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~l~~li~ 232 (257)
T cd05116 158 GKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEV-----TQMIESGERMECPQRCPPEMYDLMK 232 (257)
T ss_pred CCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHCCCCCCCCCCCCHHHHHHHH
Confidence 123468999999988889999999999999999998 8877754322211 1122222233445567788999999
Q ss_pred HhcccCCCCCCCHHHHHHHhhh
Q 010932 296 KCLQYEAKDRPDVKFLLSAVAP 317 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~l~~ 317 (497)
+||+.||++|||+.+|...|+.
T Consensus 233 ~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 233 LCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHhccCchhCcCHHHHHHHHhc
Confidence 9999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-41 Score=343.06 Aligned_cols=251 Identities=18% Similarity=0.193 Sum_probs=209.7
Q ss_pred cccccccCCCCCCcEEEEEEEcCC-cEEEEEEccCCCCCChhHHHHHHHHhccCC-CCcceeeeeee-ee------CCce
Q 010932 63 SELIVSESGDKAPNVVYRGRLKNN-RLVAIKRFSRQSWPDPHQFVTEAAGLGNVR-HKRLVNLIGCC-AE------GDER 133 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~-~~------~~~~ 133 (497)
...|.+.|.+|+|+.||++....+ ..||+|++-..+....+.+.+||++|+.|+ |+|||.+++.. .. .-+.
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 446667789999999999998765 999999987776667888999999999997 99999999933 21 1257
Q ss_pred EEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQN-RKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
+|.||||.||.|-+++..+....|++.++++|+.++|+|+.+||... +|||||||-|||||+.+|+.||||||.+....
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~ 197 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKI 197 (738)
T ss_pred EeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccccccc
Confidence 89999999999999998777778999999999999999999999874 59999999999999999999999999987432
Q ss_pred CCC-------------ccccCCCCCCccccc---cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccccccc
Q 010932 213 DGK-------------SYSTNLAYTPPEFLR---TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDS 276 (497)
Q Consensus 213 ~~~-------------~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~ 276 (497)
... ...+|+.|+|||.+. +..++.|+|||+|||+||-|+....||.... -..+++.
T Consensus 198 ~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg--------~laIlng 269 (738)
T KOG1989|consen 198 LSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG--------KLAILNG 269 (738)
T ss_pred CCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc--------ceeEEec
Confidence 221 124689999999874 6789999999999999999999999985431 2334444
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 277 SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 277 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
...-+..+..+..+.+||..||+.||++||++-+++..+..+...
T Consensus 270 ~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 270 NYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred cccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 443333467899999999999999999999999999998777643
|
|
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-41 Score=334.38 Aligned_cols=244 Identities=17% Similarity=0.157 Sum_probs=197.6
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC---CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
.+.+++.||+|+||+||++..+ +++.||||++.... ......+.+|+.++..++||||+++++.+.+.+..++|||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME 81 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 4567788899999999999976 48999999996432 2234578889999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---- 214 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 214 (497)
|++||+|.+++.. ...+++..+..++.|++.||.|||+++ ++||||||+|||++.+|.++|+|||+++.....
T Consensus 82 ~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~~L~~lH~~g-ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 82 FLPGGDMMTLLMK--KDTLSEEATQFYIAETVLAIDAIHQLG-FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred CCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 9999999999865 567999999999999999999999999 999999999999999999999999998643211
Q ss_pred -----------------------------------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCc
Q 010932 215 -----------------------------------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPS 259 (497)
Q Consensus 215 -----------------------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~ 259 (497)
....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence 124689999999999999999999999999999999999998865
Q ss_pred hhhHHHhccccccccccccCCCCC--HHHHHHHHHHHHHhcccCCCCCCC---HHHHHHH
Q 010932 260 HALDVIRGKNLLLLMDSSLEGQYA--NEDATQLVELASKCLQYEAKDRPD---VKFLLSA 314 (497)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dp~~Rps---~~~ll~~ 314 (497)
......... +........++ ...+..+.+|+.+|+. ||.+|++ +.+++++
T Consensus 239 ~~~~~~~~~----i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 239 ETPQETYRK----VMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCHHHHHHH----HHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence 433222111 11100001111 1256778999999775 9999984 6777765
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-42 Score=302.02 Aligned_cols=246 Identities=18% Similarity=0.174 Sum_probs=201.4
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC----C----hhHHHHHHHHhccCC-CCcceeeeeeeeeCCce
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP----D----PHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDER 133 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~----~----~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~ 133 (497)
+.--..+|.|..++|-++.++ +|..+|+|++...... . .+.-.+|+.+|+++. ||+|+.+.+++.++...
T Consensus 19 y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~ 98 (411)
T KOG0599|consen 19 YEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFV 98 (411)
T ss_pred cChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchh
Confidence 333344589999999999876 4889999998643211 1 234678999999994 99999999999999999
Q ss_pred EEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC
Q 010932 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD 213 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 213 (497)
++|+|.|+.|.|.++|.. .-.+++....+|++|+..|++|||.++ ||||||||+|||++++.++||+|||+++....
T Consensus 99 FlVFdl~prGELFDyLts--~VtlSEK~tR~iMrqlfegVeylHa~~-IVHRDLKpENILlddn~~i~isDFGFa~~l~~ 175 (411)
T KOG0599|consen 99 FLVFDLMPRGELFDYLTS--KVTLSEKETRRIMRQLFEGVEYLHARN-IVHRDLKPENILLDDNMNIKISDFGFACQLEP 175 (411)
T ss_pred hhhhhhcccchHHHHhhh--heeecHHHHHHHHHHHHHHHHHHHHhh-hhhcccChhheeeccccceEEeccceeeccCC
Confidence 999999999999999965 668999999999999999999999999 99999999999999999999999999998877
Q ss_pred CC---ccccCCCCCCcccccc------CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCH
Q 010932 214 GK---SYSTNLAYTPPEFLRT------GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYAN 284 (497)
Q Consensus 214 ~~---~~~gt~~y~aPE~~~~------~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (497)
+. ..+|||+|+|||.+.. ..|+...|+|++||+||.|+.|.+||.....-.+..... .-......+-..
T Consensus 176 GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~Im--eGkyqF~speWa 253 (411)
T KOG0599|consen 176 GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIM--EGKYQFRSPEWA 253 (411)
T ss_pred chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHH--hcccccCCcchh
Confidence 64 5799999999999863 347888999999999999999998875432222211100 011122333345
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 285 EDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 285 ~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+.+..+.+||.+||+.||.+|.|++++|.|
T Consensus 254 dis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 254 DISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred hccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 677889999999999999999999999986
|
|
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=314.34 Aligned_cols=249 Identities=22% Similarity=0.347 Sum_probs=203.9
Q ss_pred CCcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeee-eCCceEEEEEc
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA-EGDERLLVAQY 139 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~ 139 (497)
...+.+.+.+|+|+||.||++... |..||+|.++... ..+.+.+|+.++++++|+||+++++++. .++..++|+||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 345677888999999999999874 7889999986543 3567999999999999999999999764 45678999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-Cccc
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-KSYS 218 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~ 218 (497)
+++++|.+++.......+++..+..++.+|+.||.|||+++ ++|+||||+||+++.++.+||+|||+++..... ....
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 160 (256)
T cd05082 82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 160 (256)
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccccchheEEEcCCCcEEecCCccceeccccCCCCc
Confidence 99999999997655556899999999999999999999999 999999999999999999999999998754433 2334
Q ss_pred cCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHh
Q 010932 219 TNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKC 297 (497)
Q Consensus 219 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 297 (497)
++..|+|||++.+..++.++|||||||++|+|++ |+.|+.......... .+........+..++..+.+++.+|
T Consensus 161 ~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~~ 235 (256)
T cd05082 161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP-----RVEKGYKMDAPDGCPPVVYDVMKQC 235 (256)
T ss_pred cceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHhcCCCCCCCCCCCHHHHHHHHHH
Confidence 4568999999998889999999999999999998 877765432222111 1111122233445677899999999
Q ss_pred cccCCCCCCCHHHHHHHhhhh
Q 010932 298 LQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 298 l~~dp~~Rps~~~ll~~l~~~ 318 (497)
|+.+|++|||+.++++.|+.+
T Consensus 236 l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 236 WHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred hcCChhhCcCHHHHHHHHhcC
Confidence 999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=315.13 Aligned_cols=248 Identities=23% Similarity=0.329 Sum_probs=202.6
Q ss_pred cccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 142 (497)
.+.+.+++|+|+||.||+|.+.+...||+|+++.... ..+.+.+|+++++.++||||+++++++.. ...++||||+++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~~ 84 (262)
T cd05071 7 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSK 84 (262)
T ss_pred HeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcCCC
Confidence 4678889999999999999987666799999975332 45679999999999999999999998754 567999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-----cc
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK-----SY 217 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 217 (497)
++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||.++...... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~ 163 (262)
T cd05071 85 GSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 163 (262)
T ss_pred CcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcccEEEcCCCcEEeccCCceeeccccccccccCC
Confidence 99999997644567899999999999999999999999 9999999999999999999999999987543322 22
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
.++..|+|||+..+..++.++|||||||++|+|+| |..||.......... ..........+...+..+.+|+.+
T Consensus 164 ~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~ 238 (262)
T cd05071 164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD-----QVERGYRMPCPPECPESLHDLMCQ 238 (262)
T ss_pred cccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHH-----HHhcCCCCCCccccCHHHHHHHHH
Confidence 34567999999988889999999999999999999 665654432221111 111111122344567789999999
Q ss_pred hcccCCCCCCCHHHHHHHhhhh
Q 010932 297 CLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
||+.||++|||+.++++.|+..
T Consensus 239 ~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 239 CWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HccCCcccCCCHHHHHHHHHHh
Confidence 9999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-41 Score=331.42 Aligned_cols=247 Identities=18% Similarity=0.164 Sum_probs=200.3
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC---CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW---PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
.+.+++.||+|+||+||++... +|+.||||+++.... ...+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME 81 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence 3567788899999999999976 589999999975422 234568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC---
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--- 215 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 215 (497)
|+++++|.+++... ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~-i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 159 (330)
T cd05601 82 YQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQMG-YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVN 159 (330)
T ss_pred CCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEcccCchHheEECCCCCEEeccCCCCeECCCCCcee
Confidence 99999999999653 357999999999999999999999999 9999999999999999999999999997654322
Q ss_pred --ccccCCCCCCccccc------cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHH
Q 010932 216 --SYSTNLAYTPPEFLR------TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287 (497)
Q Consensus 216 --~~~gt~~y~aPE~~~------~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (497)
...||+.|+|||++. ...++.++|||||||++|+|++|+.||........... +... ............+
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~-i~~~-~~~~~~~~~~~~~ 237 (330)
T cd05601 160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNN-IMNF-QRFLKFPEDPKVS 237 (330)
T ss_pred eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHH-HHcC-CCccCCCCCCCCC
Confidence 246789999999987 45678999999999999999999998865432211111 0000 0001111122356
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 288 TQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 288 ~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..+.+|+.+||+ +|.+|||+.+++.+
T Consensus 238 ~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 238 SDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred HHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 779999999998 99999999999976
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=314.54 Aligned_cols=241 Identities=22% Similarity=0.324 Sum_probs=196.1
Q ss_pred cCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCChh
Q 010932 69 ESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLS 146 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 146 (497)
.||+|+||.||+|.+. +|+.||+|.+...... ....+.+|+++++.++||||+++++++......++||||+++++|.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 81 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL 81 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence 5799999999999975 5899999988644322 2457999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCc------cccC
Q 010932 147 KHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS------YSTN 220 (497)
Q Consensus 147 ~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~------~~gt 220 (497)
+++... ...+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.+||+|||++........ ...+
T Consensus 82 ~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 159 (252)
T cd05084 82 TFLRTE-GPRLKVKELIQMVENAAAGMEYLESKH-CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIP 159 (252)
T ss_pred HHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCc
Confidence 998642 456899999999999999999999999 99999999999999999999999999875433211 1123
Q ss_pred CCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcc
Q 010932 221 LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299 (497)
Q Consensus 221 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 299 (497)
..|+|||.+.++.++.++|||||||++|+|++ |..|+........ ...+........+...+..+.+|+.+||+
T Consensus 160 ~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 234 (252)
T cd05084 160 VKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQT-----REAIEQGVRLPCPELCPDAVYRLMERCWE 234 (252)
T ss_pred eeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHH-----HHHHHcCCCCCCcccCCHHHHHHHHHHcC
Confidence 56999999998899999999999999999998 6655532221111 11111112223445567789999999999
Q ss_pred cCCCCCCCHHHHHHHhh
Q 010932 300 YEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 300 ~dp~~Rps~~~ll~~l~ 316 (497)
.+|++|||+.++++.|+
T Consensus 235 ~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 235 YDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CChhhCcCHHHHHHHHh
Confidence 99999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=315.84 Aligned_cols=248 Identities=23% Similarity=0.303 Sum_probs=202.2
Q ss_pred ccccccCCCCCCcEEEEEEEcC----CcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLKN----NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
+.+...+|+|+||+||+|.+.. ...||||+++..... ....|.+|+.+++.++||||+++++++...+..++|||
T Consensus 6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e 85 (266)
T cd05033 6 VTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITE 85 (266)
T ss_pred ceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEE
Confidence 4556777999999999999742 458999998754322 24578999999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC---
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--- 215 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 215 (497)
|+++++|.+++... .+.+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||+++......
T Consensus 86 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 163 (266)
T cd05033 86 YMENGSLDKFLREN-DGKFTVGQLVGMLRGIASGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATY 163 (266)
T ss_pred cCCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCCEEECccchhhcccccccce
Confidence 99999999998653 357899999999999999999999999 9999999999999999999999999998654211
Q ss_pred ---ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHH
Q 010932 216 ---SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291 (497)
Q Consensus 216 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (497)
...+++.|+|||.+.+..++.++||||||+++|+|++ |..|+.......... .+........+..++..+.
T Consensus 164 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~ 238 (266)
T cd05033 164 TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIK-----AVEDGYRLPPPMDCPSALY 238 (266)
T ss_pred eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHH-----HHHcCCCCCCCCCCCHHHH
Confidence 1233567999999998899999999999999999998 887764432221111 1111112223345677899
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHhhhh
Q 010932 292 ELASKCLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
+|+.+||+.+|++||++.+++++|+.+
T Consensus 239 ~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 239 QLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred HHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-41 Score=320.75 Aligned_cols=250 Identities=22% Similarity=0.281 Sum_probs=202.4
Q ss_pred CCcccccccCCCCCCcEEEEEEEc------CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK------NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 134 (497)
+....+.+++|+|+||.||++... ++..+|+|.+........+.+.+|+++++.++|+||+++++++......+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence 345567788999999999999742 36689999987655444668999999999999999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCCC-------------CCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCee
Q 010932 135 LVAQYMPNDTLSKHLFHWDK-------------QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~-------------~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~k 201 (497)
+||||+++++|.+++..... ..+++..+..++.||+.||.|||+.+ ++|+||||+|||+++++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~nil~~~~~~~k 162 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH-FVHRDLATRNCLVGQGLVVK 162 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC-eecccccHhhEEEcCCCCEE
Confidence 99999999999999865321 35899999999999999999999999 99999999999999999999
Q ss_pred EcccCCccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhcccccccc
Q 010932 202 LSSFGLMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLM 274 (497)
Q Consensus 202 l~Dfgla~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~ 274 (497)
|+|||++...... ....+++.|+|||++.+..++.++|||||||++|||++ |..||........ ....
T Consensus 163 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-----~~~~ 237 (280)
T cd05092 163 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA-----IECI 237 (280)
T ss_pred ECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH-----HHHH
Confidence 9999998754322 12234678999999998899999999999999999998 7766543221111 1111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 010932 275 DSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 275 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~ 316 (497)
........+..++..+.+|+.+||+.||.+||++.+|++.|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 238 TQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 111112233456677999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-41 Score=343.53 Aligned_cols=247 Identities=19% Similarity=0.232 Sum_probs=202.6
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeCC-------
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD------- 131 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------- 131 (497)
..|.+.+.||+|+||+||++... +|+.||||++...... ....+.+|+.+|..++|+||++++..+....
T Consensus 32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~ 111 (496)
T PTZ00283 32 KKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENV 111 (496)
T ss_pred CCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccc
Confidence 35677888899999999999965 5999999998754332 2456889999999999999999988775432
Q ss_pred -ceEEEEEcCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCc
Q 010932 132 -ERLLVAQYMPNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLM 208 (497)
Q Consensus 132 -~~~lv~e~~~~~~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 208 (497)
..++||||+++|+|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++
T Consensus 112 ~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~-IiHrDLKP~NILl~~~~~vkL~DFGls 190 (496)
T PTZ00283 112 LMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH-MIHRDIKSANILLCSNGLVKLGDFGFS 190 (496)
T ss_pred eEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEeCCCCEEEEecccC
Confidence 367999999999999998643 2357899999999999999999999999 999999999999999999999999998
Q ss_pred cccCC------CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCC
Q 010932 209 KNSRD------GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282 (497)
Q Consensus 209 ~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (497)
+.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......+..... . ......
T Consensus 191 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~----~-~~~~~~ 265 (496)
T PTZ00283 191 KMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTL----A-GRYDPL 265 (496)
T ss_pred eeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHh----c-CCCCCC
Confidence 75432 234578999999999999899999999999999999999999886543322211111 1 111234
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 283 ANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 283 ~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+...++.+.+|+.+||+.||.+|||+.+++++
T Consensus 266 ~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 266 PPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 55567889999999999999999999999976
|
|
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-40 Score=325.35 Aligned_cols=243 Identities=16% Similarity=0.198 Sum_probs=190.6
Q ss_pred cccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
.+.+++.||+|+||.||+|.... +..||+|+.... ....|+.++++++||||+++++++......++|+|++.
T Consensus 67 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 140 (357)
T PHA03209 67 GYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS 140 (357)
T ss_pred CcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC
Confidence 46788899999999999999764 789999985432 24579999999999999999999999999999999995
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---Cccc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---KSYS 218 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~ 218 (497)
++|.+++.. ....+++..+..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 141 -~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 217 (357)
T PHA03209 141 -SDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQR-IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLA 217 (357)
T ss_pred -CcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEecCccccccccCccccccc
Confidence 678888754 3567999999999999999999999999 999999999999999999999999998753322 2456
Q ss_pred cCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhH----HHh--ccccccc------cccccC-------
Q 010932 219 TNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALD----VIR--GKNLLLL------MDSSLE------- 279 (497)
Q Consensus 219 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~----~~~--~~~~~~~------~~~~~~------- 279 (497)
||+.|+|||++.+..++.++|||||||++|||+++..++...... ... ...+... ......
T Consensus 218 gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 297 (357)
T PHA03209 218 GTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRL 297 (357)
T ss_pred ccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHH
Confidence 899999999999999999999999999999999976654221000 000 0000000 000000
Q ss_pred ------------CCC-------CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 280 ------------GQY-------ANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 280 ------------~~~-------~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
... ....+..+.+||.+||+.||++|||+.+++++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 298 VRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred HHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 000 01234467789999999999999999999986
|
|
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=327.36 Aligned_cols=232 Identities=21% Similarity=0.242 Sum_probs=189.5
Q ss_pred cCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC---CChhHHHHHHH-HhccCCCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 69 ESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW---PDPHQFVTEAA-GLGNVRHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
.||+|+||+||++... +|+.||||++..... .....+..|.. +++.++||||+++++++...+..++||||++++
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG 81 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCC
Confidence 4799999999999975 589999999865321 22345556655 467789999999999999999999999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC----CCcccc
Q 010932 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----GKSYST 219 (497)
Q Consensus 144 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~g 219 (497)
+|..++.. ...+++..+..++.||+.||.|||+.| ++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~g-ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (325)
T cd05604 82 ELFFHLQR--ERSFPEPRARFYAAEIASALGYLHSIN-IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCG 158 (325)
T ss_pred CHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccC
Confidence 99988864 567999999999999999999999999 99999999999999999999999999875322 234568
Q ss_pred CCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcc
Q 010932 220 NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299 (497)
Q Consensus 220 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 299 (497)
|+.|+|||++.+..++.++|||||||++|+|++|..||............ .... ...++..+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~ll~~ll~ 232 (325)
T cd05604 159 TPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNI----LHKP--LVLRPGASLTAWSILEELLE 232 (325)
T ss_pred ChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHH----HcCC--ccCCCCCCHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999988654332221111 1111 11223456778999999999
Q ss_pred cCCCCCCCHH
Q 010932 300 YEAKDRPDVK 309 (497)
Q Consensus 300 ~dp~~Rps~~ 309 (497)
.+|.+||++.
T Consensus 233 ~~p~~R~~~~ 242 (325)
T cd05604 233 KDRQRRLGAK 242 (325)
T ss_pred cCHHhcCCCC
Confidence 9999999875
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=320.64 Aligned_cols=256 Identities=18% Similarity=0.233 Sum_probs=204.6
Q ss_pred CCcccccccCCCCCCcEEEEEEEcC-Cc--EEEEEEccCCC-CCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKN-NR--LVAIKRFSRQS-WPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 135 (497)
|+++.+.+.||.|+||.||+|..++ +. .+++|.++... ....+.+.+|+.++.++ +||||+++++++...+..++
T Consensus 1 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 1 WEDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred CccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 3566778889999999999999754 43 57889887432 22345789999999999 79999999999999899999
Q ss_pred EEEcCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCee
Q 010932 136 VAQYMPNDTLSKHLFHWD--------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~k 201 (497)
|+||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ-FIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCcCCcceEEECCCCeEE
Confidence 999999999999986421 135889999999999999999999999 99999999999999999999
Q ss_pred EcccCCccccCCC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccc
Q 010932 202 LSSFGLMKNSRDG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSS 277 (497)
Q Consensus 202 l~Dfgla~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~ 277 (497)
|+|||++...... .....+..|+|||++.+..++.++|||||||++|||++ |..||.......... .+...
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~-----~~~~~ 234 (297)
T cd05089 160 IADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYE-----KLPQG 234 (297)
T ss_pred ECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH-----HHhcC
Confidence 9999998643221 11222457999999998889999999999999999997 887775433222111 11112
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhccc
Q 010932 278 LEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQT 322 (497)
Q Consensus 278 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~ 322 (497)
.....+..++..+.+|+.+||+.+|.+|||+.++++.|+.+....
T Consensus 235 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 235 YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 222334456778999999999999999999999999998876543
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=318.95 Aligned_cols=251 Identities=22% Similarity=0.320 Sum_probs=200.1
Q ss_pred cccccCCCCCCcEEEEEEE-----cCCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeC--CceEEE
Q 010932 65 LIVSESGDKAPNVVYRGRL-----KNNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG--DERLLV 136 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv 136 (497)
.+++.||+|+||+||++.. .++..||+|+++.... .....+.+|+++|+.++||||+++++++... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 5678899999999988653 2478999999975432 2346788999999999999999999988654 357899
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK- 215 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 215 (497)
|||+++++|.+++.. ..+++..+..++.|++.||.|||+++ ++|+||||+|||++.++.++|+|||+++......
T Consensus 87 ~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 162 (283)
T cd05080 87 MEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 162 (283)
T ss_pred ecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence 999999999999854 46999999999999999999999999 9999999999999999999999999988654321
Q ss_pred ------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhH---HHhc-------cccccccccccC
Q 010932 216 ------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALD---VIRG-------KNLLLLMDSSLE 279 (497)
Q Consensus 216 ------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~---~~~~-------~~~~~~~~~~~~ 279 (497)
...++..|+|||.+.+..++.++|||||||++|+|+||..|+...... .... .......+....
T Consensus 163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (283)
T cd05080 163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMR 242 (283)
T ss_pred hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCC
Confidence 123456799999999888999999999999999999999875332111 0000 001111112222
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 280 GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 280 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
...+...+..+.+++.+||+.+|++|||++++++.|+.+.
T Consensus 243 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 243 LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 2334556788999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=313.96 Aligned_cols=248 Identities=23% Similarity=0.359 Sum_probs=206.3
Q ss_pred cccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 142 (497)
.+.+.+.+|.|+||.||++... |+.||||.+..... ..+++.+|+.+++.++|+||+++++++......++||||+++
T Consensus 7 ~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 84 (256)
T cd05039 7 ELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAK 84 (256)
T ss_pred hccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCC
Confidence 4566778899999999999875 78999999976543 457899999999999999999999999988999999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCc-cccCC
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNL 221 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-~~gt~ 221 (497)
++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||.++....... ...+.
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 163 (256)
T cd05039 85 GSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN-FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPV 163 (256)
T ss_pred CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccchhcccceEEEeCCCCEEEcccccccccccccccCCCcc
Confidence 99999997654457999999999999999999999999 99999999999999999999999999886543322 23356
Q ss_pred CCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhccc
Q 010932 222 AYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQY 300 (497)
Q Consensus 222 ~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 300 (497)
.|+|||++.++.++.++||||||+++|+|++ |..|+.......... .+........+...+..+.+++.+||..
T Consensus 164 ~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~~l~~ 238 (256)
T cd05039 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP-----HVEKGYRMEAPEGCPPEVYKVMKDCWEL 238 (256)
T ss_pred cccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH-----HHhcCCCCCCccCCCHHHHHHHHHHhcc
Confidence 7999999998889999999999999999997 887765443222111 1111112233444677899999999999
Q ss_pred CCCCCCCHHHHHHHhhhh
Q 010932 301 EAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 301 dp~~Rps~~~ll~~l~~~ 318 (497)
+|++|||+.++++.|+.+
T Consensus 239 ~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 239 DPAKRPTFKQLREQLALI 256 (256)
T ss_pred ChhhCcCHHHHHHHHhcC
Confidence 999999999999998753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-41 Score=328.55 Aligned_cols=241 Identities=21% Similarity=0.260 Sum_probs=194.8
Q ss_pred cCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC---CChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 69 ESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW---PDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
.||+|+||+||++... +++.||||+++.... ...+.+.+|+.++.++ +||||+.+++++...+..++||||++++
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGG 81 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 4799999999999975 488999999975422 2245688999999888 6999999999999999999999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC----CCcccc
Q 010932 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----GKSYST 219 (497)
Q Consensus 144 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~g 219 (497)
+|..++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (327)
T cd05617 82 DLMFHMQR--QRKLPEEHARFYAAEICIALNFLHERG-IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCG 158 (327)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccC
Confidence 99988864 457999999999999999999999999 99999999999999999999999999875321 234568
Q ss_pred CCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHH-hc-ccc-ccccccccCCCCCHHHHHHHHHHHHH
Q 010932 220 NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVI-RG-KNL-LLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 220 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~-~~-~~~-~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
|+.|+|||++.+..++.++|||||||++|+|++|+.||........ .. ... ..+... ...+|...+..+.+++.+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~li~~ 236 (327)
T cd05617 159 TPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK--PIRIPRFLSVKASHVLKG 236 (327)
T ss_pred CcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC--CCCCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999998843211000 00 000 001111 123455567789999999
Q ss_pred hcccCCCCCCCH------HHHHHH
Q 010932 297 CLQYEAKDRPDV------KFLLSA 314 (497)
Q Consensus 297 cl~~dp~~Rps~------~~ll~~ 314 (497)
||+.||++|+++ .+++++
T Consensus 237 ~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 237 FLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred HhccCHHHcCCCCCCCCHHHHHcC
Confidence 999999999984 566654
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=313.30 Aligned_cols=245 Identities=21% Similarity=0.284 Sum_probs=204.4
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
+.+.+.+|+|++|.||++..+ +|+.|++|.+..... .....+.+|+++++.++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYA 81 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeC
Confidence 345677899999999999976 489999999875422 23567899999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC----c
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK----S 216 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 216 (497)
++++|.+++.......+++..+..++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++...... .
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 160 (256)
T cd08529 82 ENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK-ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT 160 (256)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEeCCCCEEEcccccceeccCccchhhc
Confidence 9999999997654578999999999999999999999998 9999999999999999999999999987544332 3
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
..+++.|+|||++.+..++.++|||||||++|+|++|+.|+........... . ........+...+..+.+++.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~i~~ 235 (256)
T cd08529 161 IVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILK----I-IRGVFPPVSQMYSQQLAQLIDQ 235 (256)
T ss_pred cccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH----H-HcCCCCCCccccCHHHHHHHHH
Confidence 4578899999999988899999999999999999999998765432221111 1 1111223333566789999999
Q ss_pred hcccCCCCCCCHHHHHHH
Q 010932 297 CLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~ 314 (497)
||+.+|++||++.+++++
T Consensus 236 ~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 236 CLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HccCCcccCcCHHHHhhC
Confidence 999999999999999875
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=320.30 Aligned_cols=250 Identities=18% Similarity=0.252 Sum_probs=206.9
Q ss_pred hcCCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 58 TNGFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 58 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
.+-...+.+++.+|.|+||.||+|... +++.|++|.+........+.+.+|+.+++.++||||+++++.+......++|
T Consensus 16 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv 95 (296)
T cd06654 16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (296)
T ss_pred CCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence 334456778888999999999999965 5899999999876655567899999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 214 (497)
|||+++++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||++......
T Consensus 96 ~e~~~~~~L~~~~~---~~~~~~~~~~~i~~ql~~aL~~LH~~g-i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 171 (296)
T cd06654 96 MEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (296)
T ss_pred ecccCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence 99999999999985 346899999999999999999999999 999999999999999999999999998754322
Q ss_pred --CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 215 --KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 215 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
....+++.|+|||.+.+..++.++|||||||++|+|++|+.||.......... ............+...+..+.+
T Consensus 172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~ 248 (296)
T cd06654 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY---LIATNGTPELQNPEKLSAIFRD 248 (296)
T ss_pred ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHH---HHhcCCCCCCCCccccCHHHHH
Confidence 23467889999999998889999999999999999999999885443211100 0001111111223446677999
Q ss_pred HHHHhcccCCCCCCCHHHHHHH
Q 010932 293 LASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~ 314 (497)
++.+||..+|++|||+.+++++
T Consensus 249 li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 249 FLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred HHHHHCcCCcccCcCHHHHhhC
Confidence 9999999999999999999984
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-40 Score=316.03 Aligned_cols=251 Identities=18% Similarity=0.237 Sum_probs=199.3
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCc----EEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNR----LVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
++++++.||.|+||+||+|.+. +|+ .|++|.+...... ....+..|+..++.++||||+++++++.. ...+++
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i 86 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQLV 86 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEEE
Confidence 4567788999999999999974 344 4788887543221 23567888889999999999999998864 457899
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 214 (497)
+||+++|+|.+++... ...+++..+..++.||+.||.|||+++ ++|+||||+|||++.++.+||+|||+++.....
T Consensus 87 ~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T cd05111 87 TQLSPLGSLLDHVRQH-RDSLDPQRLLNWCVQIAKGMYYLEEHR-MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK 164 (279)
T ss_pred EEeCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEEcCCccceeccCCCc
Confidence 9999999999999652 457899999999999999999999999 999999999999999999999999999754322
Q ss_pred ----CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHH
Q 010932 215 ----KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQ 289 (497)
Q Consensus 215 ----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (497)
....++..|+|||++.++.++.++|||||||++|||++ |..|+........ ..++........+..++..
T Consensus 165 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 239 (279)
T cd05111 165 KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEV-----PDLLEKGERLAQPQICTID 239 (279)
T ss_pred ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHHCCCcCCCCCCCCHH
Confidence 12345678999999998899999999999999999998 8877754322211 1111111111222335567
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 290 LVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 290 l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
+.+++.+||..||++|||+.++++.|..+...
T Consensus 240 ~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 240 VYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred HHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 89999999999999999999999999887653
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=325.31 Aligned_cols=232 Identities=21% Similarity=0.268 Sum_probs=189.5
Q ss_pred cCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC---CChhHHHHHHH-HhccCCCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 69 ESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW---PDPHQFVTEAA-GLGNVRHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
.||+|+||.||++... +|+.||+|++..... .....+..|.. +++.++||||+++++++.+.+..++||||++++
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG 81 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 4799999999999986 489999999864321 12334555554 678899999999999999999999999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC----CCcccc
Q 010932 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----GKSYST 219 (497)
Q Consensus 144 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~g 219 (497)
+|...+.. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (321)
T cd05603 82 ELFFHLQR--ERCFLEPRARFYAAEVASAIGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCG 158 (321)
T ss_pred CHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccC
Confidence 99988864 567899999999999999999999999 99999999999999999999999999875322 123568
Q ss_pred CCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcc
Q 010932 220 NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299 (497)
Q Consensus 220 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 299 (497)
|+.|+|||++.+..++.++|||||||++|||++|..||........... +... ....+...+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~----i~~~--~~~~~~~~~~~~~~li~~~l~ 232 (321)
T cd05603 159 TPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDN----ILHK--PLQLPGGKTVAACDLLVGLLH 232 (321)
T ss_pred CcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHH----HhcC--CCCCCCCCCHHHHHHHHHHcc
Confidence 9999999999988899999999999999999999998865433222111 1111 123344566789999999999
Q ss_pred cCCCCCCCHH
Q 010932 300 YEAKDRPDVK 309 (497)
Q Consensus 300 ~dp~~Rps~~ 309 (497)
.||.+||++.
T Consensus 233 ~~p~~R~~~~ 242 (321)
T cd05603 233 KDQRRRLGAK 242 (321)
T ss_pred CCHhhcCCCC
Confidence 9999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=325.83 Aligned_cols=234 Identities=23% Similarity=0.244 Sum_probs=190.0
Q ss_pred cCCCCCCcEEEEEEEcC-CcEEEEEEccCCCC---CChhHHHHHHH-HhccCCCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 69 ESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSW---PDPHQFVTEAA-GLGNVRHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~---~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
.||+|+||+||++.+.. ++.||+|++..... .....+..|.. +++.++||||+++++++...+..++||||++++
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 81 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence 47999999999999764 78999999875321 12234444444 567889999999999999999999999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC----CCcccc
Q 010932 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----GKSYST 219 (497)
Q Consensus 144 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~g 219 (497)
+|..++.. ...+++..+..++.||+.||.|||+.| ++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~g-iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~g 158 (325)
T cd05602 82 ELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCG 158 (325)
T ss_pred cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccC
Confidence 99999865 567889999999999999999999999 99999999999999999999999999875322 234568
Q ss_pred CCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcc
Q 010932 220 NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299 (497)
Q Consensus 220 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 299 (497)
|+.|+|||++.+..++.++|||||||++|+|++|..||........... +... ....++..+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~----i~~~--~~~~~~~~~~~~~~li~~~l~ 232 (325)
T cd05602 159 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDN----ILNK--PLQLKPNITNSARHLLEGLLQ 232 (325)
T ss_pred CccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHH----HHhC--CcCCCCCCCHHHHHHHHHHcc
Confidence 9999999999999999999999999999999999998865433222111 1111 112334566789999999999
Q ss_pred cCCCCCCCHHHH
Q 010932 300 YEAKDRPDVKFL 311 (497)
Q Consensus 300 ~dp~~Rps~~~l 311 (497)
.||.+||++.+.
T Consensus 233 ~~p~~R~~~~~~ 244 (325)
T cd05602 233 KDRTKRLGAKDD 244 (325)
T ss_pred cCHHHCCCCCCC
Confidence 999999987643
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-40 Score=313.82 Aligned_cols=238 Identities=18% Similarity=0.315 Sum_probs=191.9
Q ss_pred cCCCCCCcEEEEEEEcC-------------CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 69 ESGDKAPNVVYRGRLKN-------------NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
.||+|+||.||+|.+.. ...|++|++..........|.+|+.+++.++||||+++++++......++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 47999999999998532 23689999876554445678999999999999999999999999889999
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCC-------eeEcccCCc
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGD-------PRLSSFGLM 208 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~-------~kl~Dfgla 208 (497)
||||+++++|..++.. ....+++..+..++.||+.||.|||+++ ++||||||+|||++.++. ++++|||++
T Consensus 82 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~ 159 (262)
T cd05077 82 VEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDKD-LVHGNVCTKNILLAREGIDGECGPFIKLSDPGIP 159 (262)
T ss_pred EEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhCC-eECCCCCcccEEEecCCccCCCCceeEeCCCCCC
Confidence 9999999999988854 2456999999999999999999999999 999999999999987664 899999998
Q ss_pred cccCCCCccccCCCCCCccccc-cCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHH
Q 010932 209 KNSRDGKSYSTNLAYTPPEFLR-TGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANED 286 (497)
Q Consensus 209 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (497)
..........++..|+|||++. +..++.++|||||||++|||++ |..|+.......... ...... ......
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~-----~~~~~~--~~~~~~ 232 (262)
T cd05077 160 ITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER-----FYEGQC--MLVTPS 232 (262)
T ss_pred ccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH-----HHhcCc--cCCCCC
Confidence 8766555667888999999987 4668999999999999999985 665554322111100 000000 111223
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010932 287 ATQLVELASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 287 ~~~l~~li~~cl~~dp~~Rps~~~ll~~l 315 (497)
+.++.+|+.+||+.||++||++.+|++.+
T Consensus 233 ~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 233 CKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred hHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 56789999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=337.98 Aligned_cols=247 Identities=20% Similarity=0.237 Sum_probs=191.1
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeC--------Cc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG--------DE 132 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--------~~ 132 (497)
..+.+++.||+|+||+||+|... +++.||||++.... ....+|+.+|+.++|||||++++++... ..
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 141 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIF 141 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceE
Confidence 35678888999999999999975 48999999885432 3456799999999999999999887432 23
Q ss_pred eEEEEEcCCCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC-CeeEcccCCcc
Q 010932 133 RLLVAQYMPNDTLSKHLFH--WDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG-DPRLSSFGLMK 209 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~ 209 (497)
.++||||+++ +|.+++.. .....+++..+..++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++
T Consensus 142 l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~-IiHrDLKp~NILl~~~~~~vkL~DFGla~ 219 (440)
T PTZ00036 142 LNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF-ICHRDLKPQNLLIDPNTHTLKLCDFGSAK 219 (440)
T ss_pred EEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCcCHHHEEEcCCCCceeeeccccch
Confidence 6789999974 67666642 23567999999999999999999999999 99999999999999664 79999999998
Q ss_pred ccCCC---CccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc--------------
Q 010932 210 NSRDG---KSYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL-------------- 271 (497)
Q Consensus 210 ~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~-------------- 271 (497)
..... ....+|+.|+|||++.+. .++.++|||||||++|||++|..||.+..........+.
T Consensus 220 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~ 299 (440)
T PTZ00036 220 NLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMN 299 (440)
T ss_pred hccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhc
Confidence 65332 345678999999998764 689999999999999999999988865421110000000
Q ss_pred ---------cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 272 ---------LLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 272 ---------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
......+...++...+.++.+|+.+||+.||.+|||+.+++++
T Consensus 300 ~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 300 PNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred hhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 0000011111233456789999999999999999999999986
|
|
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=318.49 Aligned_cols=254 Identities=19% Similarity=0.300 Sum_probs=200.7
Q ss_pred cccccccCCCCCCcEEEEEEEc-----CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeee--CCceEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-----NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE--GDERLL 135 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~l 135 (497)
.+.+++.+|+|+||.||++..+ ++..||||++........+.+.+|+++++.++||||+++++++.. ....++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 84 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL 84 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence 4567888999999999999742 478999999876554445679999999999999999999998754 346899
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK 215 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 215 (497)
|+||+++++|.+++... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 85 v~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~LH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 162 (284)
T cd05081 85 VMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYLGSKR-YVHRDLATRNILVESENRVKIGDFGLTKVLPQDK 162 (284)
T ss_pred EEEecCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHhhEEECCCCeEEECCCcccccccCCC
Confidence 99999999999998642 456899999999999999999999999 9999999999999999999999999998654332
Q ss_pred c-------cccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHh---cc--------ccccccccc
Q 010932 216 S-------YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIR---GK--------NLLLLMDSS 277 (497)
Q Consensus 216 ~-------~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~---~~--------~~~~~~~~~ 277 (497)
. ..++..|+|||++.+..++.++|||||||++|||++|..++......... .. .+...+...
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (284)
T cd05081 163 EYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNN 242 (284)
T ss_pred cceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcC
Confidence 1 11234599999999888999999999999999999987654322111110 00 000111111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhh
Q 010932 278 LEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 278 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
.....+...+..+.+|+.+||+.+|++|||+.+|++.|+.+
T Consensus 243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 243 GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 12222344667899999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=321.30 Aligned_cols=255 Identities=19% Similarity=0.268 Sum_probs=202.3
Q ss_pred CCcccccccCCCCCCcEEEEEEEcC-Cc--EEEEEEccCCCC-CChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKN-NR--LVAIKRFSRQSW-PDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~--~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 135 (497)
|+++.+.+.||+|+||.||+|.++. +. .+++|.++.... .....+.+|+.++.++ +||||+++++++...+..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 4556777888999999999999753 54 468887764322 2245788999999999 89999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCee
Q 010932 136 VAQYMPNDTLSKHLFHWD--------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~k 201 (497)
||||+++++|.+++.... ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+|
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dlkp~Nili~~~~~~k 164 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAK 164 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEecCCCcEE
Confidence 999999999999986421 236899999999999999999999999 99999999999999999999
Q ss_pred EcccCCccccCCC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccc
Q 010932 202 LSSFGLMKNSRDG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSS 277 (497)
Q Consensus 202 l~Dfgla~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~ 277 (497)
|+|||++...... ....++..|+|||++.+..++.++|||||||++|||+| |..||.......... .+...
T Consensus 165 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~-----~~~~~ 239 (303)
T cd05088 165 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE-----KLPQG 239 (303)
T ss_pred eCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHH-----HHhcC
Confidence 9999998643211 11223567999999988889999999999999999998 887764332221111 11111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 278 LEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 278 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
.....+...+..+.+|+.+||+.+|++|||+.+++..|..+...
T Consensus 240 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 240 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 12223334567799999999999999999999999999877543
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=319.16 Aligned_cols=251 Identities=21% Similarity=0.325 Sum_probs=203.7
Q ss_pred cccccccCCCCCCcEEEEEEEcC------CcEEEEEEccCCCC-CChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceE
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQSW-PDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 134 (497)
.+.+++.+|+|+||.||++.+.+ ...+|+|.+..... .....+.+|+.++.++ +||||+++++++..++..+
T Consensus 13 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~ 92 (293)
T cd05053 13 RLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLY 92 (293)
T ss_pred HeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeE
Confidence 34667788999999999998642 36899999875432 2235688999999999 7999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcC--------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCe
Q 010932 135 LVAQYMPNDTLSKHLFHW--------------DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDP 200 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~ 200 (497)
+||||+++++|..++... ....+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.+
T Consensus 93 li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~Nil~~~~~~~ 171 (293)
T cd05053 93 VVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK-CIHRDLAARNVLVTEDHVM 171 (293)
T ss_pred EEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-ccccccceeeEEEcCCCeE
Confidence 999999999999998542 2457899999999999999999999999 9999999999999999999
Q ss_pred eEcccCCccccCCCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccc
Q 010932 201 RLSSFGLMKNSRDGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLL 273 (497)
Q Consensus 201 kl~Dfgla~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~ 273 (497)
||+|||+++...... ...++..|+|||++.+..++.++|||||||++|||++ |..|++......... .
T Consensus 172 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~-----~ 246 (293)
T cd05053 172 KIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK-----L 246 (293)
T ss_pred EeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHH-----H
Confidence 999999998654321 1223567999999988889999999999999999998 777765443222111 1
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 274 MDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 274 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
+........+...+..+.+|+.+||+.||++|||+.++++.|+.+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 247 LKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 1112222334456678999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-41 Score=327.94 Aligned_cols=251 Identities=21% Similarity=0.342 Sum_probs=221.5
Q ss_pred cccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCCh
Q 010932 67 VSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTL 145 (497)
Q Consensus 67 ~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 145 (497)
-.+||.|-||.||.|.|+. ...||||.++... ...++|+.|..+|+.++|||+|+++|+|.....+|||+|||.+|+|
T Consensus 272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNL 350 (1157)
T KOG4278|consen 272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNL 350 (1157)
T ss_pred eeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccH
Confidence 4678999999999999976 7789999998654 4568999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC--cccc---C
Q 010932 146 SKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SYST---N 220 (497)
Q Consensus 146 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--~~~g---t 220 (497)
.++|++..+..++.-..+.++.||..|+.||..++ +|||||-..|.|+.++..||++|||+++++.... ...| .
T Consensus 351 LdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn-FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFP 429 (1157)
T KOG4278|consen 351 LDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFP 429 (1157)
T ss_pred HHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh-hhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCc
Confidence 99999888888999999999999999999999999 9999999999999999999999999999876543 2233 4
Q ss_pred CCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcc
Q 010932 221 LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299 (497)
Q Consensus 221 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 299 (497)
+-|.|||-+....++.|+|||+|||+||||.| |-.|+++..... +..++....+.+-|..|++.+.+|++.||+
T Consensus 430 IKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSq-----VY~LLEkgyRM~~PeGCPpkVYeLMraCW~ 504 (1157)
T KOG4278|consen 430 IKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-----VYGLLEKGYRMDGPEGCPPKVYELMRACWN 504 (1157)
T ss_pred ccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHH-----HHHHHhccccccCCCCCCHHHHHHHHHHhc
Confidence 67999999999999999999999999999988 556766654333 344566677777888999999999999999
Q ss_pred cCCCCCCCHHHHHHHhhhhhccccc
Q 010932 300 YEAKDRPDVKFLLSAVAPLQKQTEV 324 (497)
Q Consensus 300 ~dp~~Rps~~~ll~~l~~~~~~~~~ 324 (497)
++|.+||+++++.+.++.+......
T Consensus 505 WsPsDRPsFaeiHqafEtmf~~sSi 529 (1157)
T KOG4278|consen 505 WSPSDRPSFAEIHQAFETMFSSSSI 529 (1157)
T ss_pred CCcccCccHHHHHHHHHHHhccccc
Confidence 9999999999999999888765433
|
|
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-41 Score=317.38 Aligned_cols=240 Identities=22% Similarity=0.333 Sum_probs=194.6
Q ss_pred cCCCCCCcEEEEEEEcC-C-------cEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 69 ESGDKAPNVVYRGRLKN-N-------RLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
.||.|+||.||+|..+. + ..|++|.+........+.+.+|+.+++.++||||+++++++..+...++||||+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV 81 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence 47999999999998643 2 348888886554444567899999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCC--------eeEcccCCccccC
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGD--------PRLSSFGLMKNSR 212 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~--------~kl~Dfgla~~~~ 212 (497)
++|+|..++... +..+++..+..++.||+.||.|||+++ ++||||||+||+++.++. ++++|||++....
T Consensus 82 ~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~ 159 (258)
T cd05078 82 KFGSLDTYLKKN-KNLINISWKLEVAKQLAWALHFLEDKG-LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL 159 (258)
T ss_pred CCCcHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEecccccccCCCceEEecccccccccC
Confidence 999999998653 347899999999999999999999999 999999999999987765 6999999988766
Q ss_pred CCCccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHH
Q 010932 213 DGKSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291 (497)
Q Consensus 213 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (497)
......+++.|+|||++.+ ..++.++|||||||++|+|++|..+|......... . ..... ....+...+..+.
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~-~---~~~~~--~~~~~~~~~~~~~ 233 (258)
T cd05078 160 PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK-L---QFYED--RHQLPAPKWTELA 233 (258)
T ss_pred CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH-H---HHHHc--cccCCCCCcHHHH
Confidence 6566678899999999986 45799999999999999999996544322111100 0 01111 1223444556799
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHhh
Q 010932 292 ELASKCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps~~~ll~~l~ 316 (497)
+|+.+||+.||++|||++++++.|.
T Consensus 234 ~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 234 NLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred HHHHHHhccChhhCCCHHHHHHhcC
Confidence 9999999999999999999999763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=318.11 Aligned_cols=247 Identities=21% Similarity=0.309 Sum_probs=197.2
Q ss_pred ccccccCCCCCCcEEEEEEEc------CCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLK------NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
+.+.+.+|+|+||.||+|.++ .+..||||++..... .....+.+|+.+++.++||||+++++++......++|
T Consensus 8 ~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv 87 (277)
T cd05062 8 ITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 87 (277)
T ss_pred ceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEE
Confidence 456677899999999999853 256899999864322 2245688999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCc
Q 010932 137 AQYMPNDTLSKHLFHWD--------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLM 208 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~--------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 208 (497)
|||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++
T Consensus 88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~vH~dlkp~Nil~~~~~~~~l~dfg~~ 166 (277)
T cd05062 88 MELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMT 166 (277)
T ss_pred EecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCcchheEEEcCCCCEEECCCCCc
Confidence 99999999999986421 134678899999999999999999998 999999999999999999999999998
Q ss_pred cccCCCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCC
Q 010932 209 KNSRDGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQ 281 (497)
Q Consensus 209 ~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (497)
+...... ...+++.|+|||++.+..++.++|||||||++|||++ |..|+.......... .+.......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~-----~~~~~~~~~ 241 (277)
T cd05062 167 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLR-----FVMEGGLLD 241 (277)
T ss_pred cccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH-----HHHcCCcCC
Confidence 7543221 2234678999999998889999999999999999999 566664432221111 111111112
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 010932 282 YANEDATQLVELASKCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 282 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~ 316 (497)
.+...+..+.+++.+||+.||++|||+.++++.|+
T Consensus 242 ~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 242 KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 33445678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-40 Score=314.07 Aligned_cols=255 Identities=18% Similarity=0.243 Sum_probs=206.9
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC---hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
+.+.+.+.||.|+||.||++... +|..||||.+....... ...+.+|+.+++.++||||+++++++..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 45667788899999999999964 68999999886543222 357889999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC
Q 010932 138 QYMPNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK 215 (497)
Q Consensus 138 e~~~~~~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 215 (497)
||+++++|.+++... ....+++..+..++.+|+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence 999999999988632 2456899999999999999999999999 9999999999999999999999999987543322
Q ss_pred ----ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHH
Q 010932 216 ----SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291 (497)
Q Consensus 216 ----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (497)
...++..|+|||++.+..++.++||||||+++|+|++|..|+........... ..+.........+...+..+.
T Consensus 161 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd08229 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC--KKIEQCDYPPLPSDHYSEELR 238 (267)
T ss_pred cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHh--hhhhcCCCCCCCcccccHHHH
Confidence 34678899999999988899999999999999999999988754322211110 011111111112234677899
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 292 ELASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
+++.+||+.||++|||+.+|++.++.+.
T Consensus 239 ~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 239 QLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred HHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 9999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-40 Score=311.86 Aligned_cols=247 Identities=22% Similarity=0.313 Sum_probs=202.0
Q ss_pred cccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 142 (497)
.+.+.+.||.|++|.||++.+.++..+|+|.+.... ...+.+.+|+.+++.++||||+++++++. ....++||||+++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~ 84 (260)
T cd05069 7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGK 84 (260)
T ss_pred HeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCC
Confidence 356777889999999999998777789999987543 23567899999999999999999999875 4568999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-----cc
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK-----SY 217 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 217 (497)
++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 163 (260)
T cd05069 85 GSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN-YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGA 163 (260)
T ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCC
Confidence 99999997654556899999999999999999999999 9999999999999999999999999987543321 22
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
.++..|+|||.+.+..++.++|||||||++|+|+| |..|+.......... .+........+...+..+.+++.+
T Consensus 164 ~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~ 238 (260)
T cd05069 164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLE-----QVERGYRMPCPQGCPESLHELMKL 238 (260)
T ss_pred ccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHHcCCCCCCCcccCHHHHHHHHH
Confidence 34567999999998889999999999999999999 777665432221111 111111223344567789999999
Q ss_pred hcccCCCCCCCHHHHHHHhhh
Q 010932 297 CLQYEAKDRPDVKFLLSAVAP 317 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~l~~ 317 (497)
||+.||++|||+.+|++.|+.
T Consensus 239 ~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 239 CWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HccCCcccCcCHHHHHHHHhc
Confidence 999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-40 Score=318.73 Aligned_cols=249 Identities=21% Similarity=0.210 Sum_probs=193.5
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccC---CCCcceeeeeeeee-----CCc
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNV---RHKRLVNLIGCCAE-----GDE 132 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l---~h~niv~~~~~~~~-----~~~ 132 (497)
|.+++.||+|+||+||+|..+ +|+.||+|.++..... ....+.+|+.+++.+ +||||+++++++.. ...
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~ 81 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK 81 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence 567788999999999999976 4899999998754322 234567788777665 69999999998864 245
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
.++||||+. ++|.+++.......+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++...
T Consensus 82 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~kl~dfg~~~~~~ 159 (288)
T cd07863 82 VTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGQVKLADFGLARIYS 159 (288)
T ss_pred EEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccCcccccc
Confidence 799999997 58888886654567999999999999999999999999 9999999999999999999999999988654
Q ss_pred CC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccc-----------cc------
Q 010932 213 DG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNL-----------LL------ 272 (497)
Q Consensus 213 ~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~-----------~~------ 272 (497)
.. ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||............. ..
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07863 160 CQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPR 239 (288)
T ss_pred CcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccc
Confidence 32 23467889999999998889999999999999999999998775432211100000 00
Q ss_pred -cccccc---CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 273 -LMDSSL---EGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 273 -~~~~~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
...... .....+..+..+.+|+.+||+.||++|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 240 GAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred cccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000 001112356678999999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=316.74 Aligned_cols=239 Identities=21% Similarity=0.351 Sum_probs=190.7
Q ss_pred cCCCCCCcEEEEEEEcC-------------------------CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceee
Q 010932 69 ESGDKAPNVVYRGRLKN-------------------------NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNL 123 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~ 123 (497)
.||+|+||.||+|.+.. ...|++|++..........|.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 57999999999998521 23589999875543334578899999999999999999
Q ss_pred eeeeeeCCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC-----
Q 010932 124 IGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG----- 198 (497)
Q Consensus 124 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~----- 198 (497)
++++......++||||+++++|..++.. ..+.+++..+..++.||+.||.|||+++ ++||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~Nill~~~~~~~~~ 159 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDKN-LVHGNVCAKNILLARLGLAEGT 159 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCC-ccCCCCCcccEEEeccCcccCc
Confidence 9999999999999999999999998864 3567899999999999999999999999 99999999999997654
Q ss_pred --CeeEcccCCccccCCCCccccCCCCCCcccccc-CCCCcccceeehhhhHHHHh-hCCCCCCchhhHHHhcccccccc
Q 010932 199 --DPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLL-SGKHIPPSHALDVIRGKNLLLLM 274 (497)
Q Consensus 199 --~~kl~Dfgla~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~ell-tg~~~~~~~~~~~~~~~~~~~~~ 274 (497)
.++++|||++..........+++.|+|||.+.+ ..++.++|||||||++|||+ +|..|+......... ...
T Consensus 160 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~-----~~~ 234 (274)
T cd05076 160 SPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKE-----RFY 234 (274)
T ss_pred cceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHH-----HHH
Confidence 379999999876544445567889999998875 56899999999999999995 677666433211110 011
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 010932 275 DSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 275 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~ 316 (497)
.. ....+...+..+.+++.+||+.+|++|||+.+|++.|.
T Consensus 235 ~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 235 EK--KHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred Hh--ccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 11 11122223457899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=325.04 Aligned_cols=235 Identities=19% Similarity=0.237 Sum_probs=193.6
Q ss_pred cccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC---CCChhHHHHHHHHhccCC-CCcceeeeeeeeeCCceEEEEEc
Q 010932 65 LIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
++++.||+|+||+||++..+ +|+.||||++.... ....+.+..|..++..+. |++|+++++++...+..++||||
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey 82 (323)
T cd05615 3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEY 82 (323)
T ss_pred eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcC
Confidence 45677899999999999975 58999999987532 223456788999988885 57888899999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC----CC
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----GK 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~ 215 (497)
+++|+|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.... ..
T Consensus 83 ~~~g~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~~-ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~ 159 (323)
T cd05615 83 VNGGDLMYHIQQ--VGKFKEPQAVFYAAEISVGLFFLHRRG-IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTR 159 (323)
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeccccccccCCCCcccc
Confidence 999999999865 467999999999999999999999999 99999999999999999999999999875322 23
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||........... +... ...++...+..+.+++.
T Consensus 160 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~----i~~~--~~~~p~~~~~~~~~li~ 233 (323)
T cd05615 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQS----IMEH--NVSYPKSLSKEAVSICK 233 (323)
T ss_pred CccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHH----HHhC--CCCCCccCCHHHHHHHH
Confidence 45689999999999988899999999999999999999998865432222111 1111 11334556778999999
Q ss_pred HhcccCCCCCCCH
Q 010932 296 KCLQYEAKDRPDV 308 (497)
Q Consensus 296 ~cl~~dp~~Rps~ 308 (497)
+||+.+|.+|++.
T Consensus 234 ~~l~~~p~~R~~~ 246 (323)
T cd05615 234 GLMTKHPSKRLGC 246 (323)
T ss_pred HHcccCHhhCCCC
Confidence 9999999999974
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=329.50 Aligned_cols=255 Identities=20% Similarity=0.188 Sum_probs=202.9
Q ss_pred HHHHhcCCCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCC---CCChhHHHHHHHHhccCCCCcceeeeeeeee
Q 010932 54 LRAATNGFSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE 129 (497)
Q Consensus 54 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 129 (497)
+....-....+.+++.||+|+||.||++.++. ++.||+|++.... ......+.+|+.+++.++||||+++++++.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 33344445677888999999999999999864 8899999986422 1224567899999999999999999999999
Q ss_pred CCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 130 GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 130 ~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
+...++||||+++|+|.+++.. ..++...+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NIll~~~~~ikL~DfG~a~ 190 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence 9999999999999999999853 46899999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCC-----CccccCCCCCCccccccC----CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccc--c
Q 010932 210 NSRDG-----KSYSTNLAYTPPEFLRTG----RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSS--L 278 (497)
Q Consensus 210 ~~~~~-----~~~~gt~~y~aPE~~~~~----~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~--~ 278 (497)
..... ....||+.|+|||++.+. .++.++|||||||++|||++|+.||.......... .+.... .
T Consensus 191 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~----~i~~~~~~~ 266 (371)
T cd05622 191 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS----KIMNHKNSL 266 (371)
T ss_pred EcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHH----HHHcCCCcc
Confidence 64332 245689999999999753 37889999999999999999999886543221111 111111 1
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHhh
Q 010932 279 EGQYANEDATQLVELASKCLQYEAKD--RPDVKFLLSAVA 316 (497)
Q Consensus 279 ~~~~~~~~~~~l~~li~~cl~~dp~~--Rps~~~ll~~l~ 316 (497)
........+..+.+++.+||..++.+ ||++.+++++..
T Consensus 267 ~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~ 306 (371)
T cd05622 267 TFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 306 (371)
T ss_pred cCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcc
Confidence 11112346778999999999844443 789999998753
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-40 Score=311.82 Aligned_cols=245 Identities=16% Similarity=0.203 Sum_probs=204.4
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC-CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
+.+++.+|.|+||.||++... ++..||+|.++... ....+.+.+|+.+++.++||||+++++.+.+++..++||||++
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (255)
T cd08219 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD 81 (255)
T ss_pred ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCC
Confidence 467788999999999999976 48999999986432 2335678899999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----Ccc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KSY 217 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 217 (497)
+++|.+++.......+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||.+...... ...
T Consensus 82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (255)
T cd08219 82 GGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR-VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTY 160 (255)
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEECCCCcEEEcccCcceeecccccccccc
Confidence 999999886544567899999999999999999999999 999999999999999999999999998755432 235
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHh
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKC 297 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 297 (497)
.+++.|+|||++.+..++.++||||||+++|+|++|..||........... +........+...+..+.+|+.+|
T Consensus 161 ~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~li~~~ 235 (255)
T cd08219 161 VGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILK-----VCQGSYKPLPSHYSYELRSLIKQM 235 (255)
T ss_pred cCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHH-----HhcCCCCCCCcccCHHHHHHHHHH
Confidence 678899999999988899999999999999999999998865432221111 111111223445667899999999
Q ss_pred cccCCCCCCCHHHHHHH
Q 010932 298 LQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 298 l~~dp~~Rps~~~ll~~ 314 (497)
|+.||++|||+.+++..
T Consensus 236 l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 236 FKRNPRSRPSATTILSR 252 (255)
T ss_pred HhCCcccCCCHHHHhhc
Confidence 99999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=321.19 Aligned_cols=254 Identities=19% Similarity=0.310 Sum_probs=205.5
Q ss_pred CcccccccCCCCCCcEEEEEEEcC--------CcEEEEEEccCCCC-CChhHHHHHHHHhccC-CCCcceeeeeeeeeCC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN--------NRLVAIKRFSRQSW-PDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGD 131 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 131 (497)
+.+.+.+.||+|+||.||++.+.+ +..+|+|.++.... .....+.+|+.++..+ +||||+++++++...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 356788899999999999998532 35799999975432 2345688999999999 7999999999999999
Q ss_pred ceEEEEEcCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC
Q 010932 132 ERLLVAQYMPNDTLSKHLFHWD--------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197 (497)
Q Consensus 132 ~~~lv~e~~~~~~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~ 197 (497)
..++||||+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++|+||||+|||++.+
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~ 176 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTED 176 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHHheEEcCC
Confidence 9999999999999999996532 135899999999999999999999998 9999999999999999
Q ss_pred CCeeEcccCCccccCCCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhcccc
Q 010932 198 GDPRLSSFGLMKNSRDGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNL 270 (497)
Q Consensus 198 ~~~kl~Dfgla~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~ 270 (497)
+.++|+|||+++...... ...+++.|+|||++.+..++.++|||||||++|+|++ |..|+.......+..
T Consensus 177 ~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~--- 253 (307)
T cd05098 177 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--- 253 (307)
T ss_pred CcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHH---
Confidence 999999999987543321 1123467999999998889999999999999999998 666664433222111
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 271 LLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
.+........+...+..+.+|+.+||+.+|++|||+.++++.|+.+.+.
T Consensus 254 --~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 254 --LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred --HHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 1111222234455677899999999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=328.02 Aligned_cols=247 Identities=19% Similarity=0.219 Sum_probs=193.9
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC--CCChhHHHHHHHHhccCCCCcceeeeeeeeeCC------c
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS--WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD------E 132 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~ 132 (497)
..|.+++.||+|+||.||++... +|..||||++.... ......+.+|+.+++.++||||+++++++.... .
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 100 (359)
T cd07876 21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQD 100 (359)
T ss_pred hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccce
Confidence 56678889999999999999975 48999999997542 223457889999999999999999999986543 4
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
.++||||+++ +|...+. ..+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++...
T Consensus 101 ~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~-ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~ 174 (359)
T cd07876 101 VYLVMELMDA-NLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAC 174 (359)
T ss_pred eEEEEeCCCc-CHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence 7999999965 5666663 35889999999999999999999999 9999999999999999999999999997543
Q ss_pred CC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc------------------ccc
Q 010932 213 DG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK------------------NLL 271 (497)
Q Consensus 213 ~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~------------------~~~ 271 (497)
.. ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||........... ...
T Consensus 175 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (359)
T cd07876 175 TNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVR 254 (359)
T ss_pred cCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 32 335678999999999999999999999999999999999998864321100000 000
Q ss_pred cccc--cccC----------------CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 272 LLMD--SSLE----------------GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 272 ~~~~--~~~~----------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.... +... .......+..+.+|+.+||+.||++|||+.+++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 255 NYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000 0000 00111235678999999999999999999999986
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=319.04 Aligned_cols=247 Identities=18% Similarity=0.264 Sum_probs=200.9
Q ss_pred cccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC---hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 65 LIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
.+.+.||+|+||.||++... +++.||||.+....... ...+.+|+.+++.++|+||+.+++.+.+.+..++||||+
T Consensus 3 ~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 82 (285)
T cd05630 3 RQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLM 82 (285)
T ss_pred eeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEec
Confidence 34556799999999999976 48999999987543222 245788999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---Ccc
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---KSY 217 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~ 217 (497)
++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ...
T Consensus 83 ~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 161 (285)
T cd05630 83 NGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR 161 (285)
T ss_pred CCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCC
Confidence 9999999886544557999999999999999999999999 999999999999999999999999998754433 234
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHh
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKC 297 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 297 (497)
.|++.|+|||++.+..++.++|||||||++|+|++|+.||........ ......... ......+...+..+.+|+.+|
T Consensus 162 ~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~ 239 (285)
T cd05630 162 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEVERLVK-EVQEEYSEKFSPDARSLCKML 239 (285)
T ss_pred CCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch-HHHHHhhhh-hhhhhcCccCCHHHHHHHHHH
Confidence 688999999999988999999999999999999999988864321100 000011111 111223444667799999999
Q ss_pred cccCCCCCCC-----HHHHHHH
Q 010932 298 LQYEAKDRPD-----VKFLLSA 314 (497)
Q Consensus 298 l~~dp~~Rps-----~~~ll~~ 314 (497)
|+.||++||| +.+++++
T Consensus 240 l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 240 LCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred hhcCHHHccCCCCCchHHHHcC
Confidence 9999999999 8899986
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-40 Score=311.51 Aligned_cols=242 Identities=21% Similarity=0.284 Sum_probs=196.5
Q ss_pred cCCCCCCcEEEEEEEc---CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCC
Q 010932 69 ESGDKAPNVVYRGRLK---NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDT 144 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 144 (497)
.||.|+||.||+|.++ .+..||+|++...... ..+.+.+|+.++++++||||+++++++.. ...++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence 3799999999999864 3567999999765332 24579999999999999999999998854 57899999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCc-------c
Q 010932 145 LSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-------Y 217 (497)
Q Consensus 145 L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-------~ 217 (497)
|.+++.. ....+++..+..++.||+.||.|||+++ ++|+||||+|||++.++.+||+|||++........ .
T Consensus 81 L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05115 81 LNKFLSG-KKDEITVSNVVELMHQVSMGMKYLEGKN-FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG 158 (257)
T ss_pred HHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhcC-eeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence 9999864 2457999999999999999999999999 99999999999999999999999999875433211 1
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
.+++.|+|||++.+..++.++|||||||++|+|++ |..|+........ ...+........+..+++++.+++.+
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~li~~ 233 (257)
T cd05115 159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEV-----MSFIEQGKRLDCPAECPPEMYALMKD 233 (257)
T ss_pred CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHH-----HHHHHCCCCCCCCCCCCHHHHHHHHH
Confidence 22468999999988889999999999999999996 8877654322111 11122222234455667889999999
Q ss_pred hcccCCCCCCCHHHHHHHhhhh
Q 010932 297 CLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
||+.+|++||++.+|.+.|+.+
T Consensus 234 c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 234 CWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HcCCChhhCcCHHHHHHHHhhh
Confidence 9999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-40 Score=311.70 Aligned_cols=253 Identities=19% Similarity=0.283 Sum_probs=206.8
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC---CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW---PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
.+.+.+.+|.|+||.||+|... +|+.||+|.++.... ...+.+.+|++++++++|+||+++++++...+..++|||
T Consensus 3 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 82 (267)
T cd08224 3 NFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLE 82 (267)
T ss_pred ceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEe
Confidence 4566777899999999999986 699999999864322 224678999999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--
Q 010932 139 YMPNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 139 ~~~~~~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 214 (497)
|+++++|..++... ....+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~ 161 (267)
T cd08224 83 LADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR-IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred cCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecCCcChhhEEECCCCcEEEeccceeeeccCCCc
Confidence 99999999988542 2456899999999999999999999999 999999999999999999999999998754332
Q ss_pred --CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCH-HHHHHHH
Q 010932 215 --KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYAN-EDATQLV 291 (497)
Q Consensus 215 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~ 291 (497)
....+++.|+|||.+.+..++.++|||||||++|+|++|+.|+......... ....+........+. ..+..+.
T Consensus 162 ~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd08224 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS---LCKKIEKCDYPPLPADHYSEELR 238 (267)
T ss_pred ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHH---HHhhhhcCCCCCCChhhcCHHHH
Confidence 2345788999999999888999999999999999999999887543211110 011111111222222 5667899
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 292 ELASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
+++.+||..+|++|||+.+|++.|+.+.
T Consensus 239 ~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 239 DLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred HHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 9999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=317.97 Aligned_cols=247 Identities=19% Similarity=0.248 Sum_probs=200.3
Q ss_pred cccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC---ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 65 LIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP---DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
.+.+.||.|+||+||++.+. +++.||+|++...... ....+.+|+++|+.++|+||+.+.+.+..++..++||||+
T Consensus 3 ~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 82 (285)
T cd05632 3 RQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIM 82 (285)
T ss_pred eEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEec
Confidence 34566799999999999975 5899999998654322 2345788999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---Ccc
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---KSY 217 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~ 217 (497)
++++|..++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ...
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 161 (285)
T cd05632 83 NGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN-TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGR 161 (285)
T ss_pred cCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCC
Confidence 9999998886544557999999999999999999999999 999999999999999999999999998754332 235
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHh
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKC 297 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 297 (497)
.|+..|+|||++.+..++.++|||||||++|+|++|..||................... ...++...+..+.+|+.+|
T Consensus 162 ~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~ 239 (285)
T cd05632 162 VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET--EEVYSAKFSEEAKSICKML 239 (285)
T ss_pred CCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcc--ccccCccCCHHHHHHHHHH
Confidence 67899999999998899999999999999999999999886542221111100111110 1123344567789999999
Q ss_pred cccCCCCCCC-----HHHHHHH
Q 010932 298 LQYEAKDRPD-----VKFLLSA 314 (497)
Q Consensus 298 l~~dp~~Rps-----~~~ll~~ 314 (497)
|+.||++||| +.+++.+
T Consensus 240 l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 240 LTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred ccCCHhHcCCCcccChHHHHcC
Confidence 9999999999 6777775
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=309.88 Aligned_cols=242 Identities=25% Similarity=0.389 Sum_probs=203.0
Q ss_pred cCCCCCCcEEEEEEEcC----CcEEEEEEccCCCCCC-hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 69 ESGDKAPNVVYRGRLKN----NRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
.+|.|+||.||++.... +..|++|+++...... .+.+.+|+.++..++|+||+++++++......++||||++++
T Consensus 2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (262)
T cd00192 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGG 81 (262)
T ss_pred ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCC
Confidence 57999999999999753 7899999998654433 578999999999999999999999999999999999999999
Q ss_pred ChhhhhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--
Q 010932 144 TLSKHLFHWD-------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 144 ~L~~~l~~~~-------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 214 (497)
+|.+++.... ...+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||.+......
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~ 160 (262)
T cd00192 82 DLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK-FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY 160 (262)
T ss_pred cHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC-cccCccCcceEEECCCCcEEEcccccccccccccc
Confidence 9999997632 367999999999999999999999999 999999999999999999999999999865542
Q ss_pred ----CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHH
Q 010932 215 ----KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQ 289 (497)
Q Consensus 215 ----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (497)
....+++.|+|||.+....++.++|||||||++|+|++ |..|+.......... .+........+...+..
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 235 (262)
T cd00192 161 YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLE-----YLRKGYRLPKPEYCPDE 235 (262)
T ss_pred cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHH-----HHHcCCCCCCCccCChH
Confidence 23456788999999998889999999999999999999 477665442222111 11112223345556788
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHhh
Q 010932 290 LVELASKCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 290 l~~li~~cl~~dp~~Rps~~~ll~~l~ 316 (497)
+.+++.+||+.+|.+|||+.+++++|+
T Consensus 236 ~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 236 LYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-40 Score=329.85 Aligned_cols=252 Identities=20% Similarity=0.296 Sum_probs=202.5
Q ss_pred cccccccCCCCCCcEEEEEEEcC------CcEEEEEEccCCCCCC-hhHHHHHHHHhccCC-CCcceeeeeeeeeCCceE
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 134 (497)
.+.+.+.||+|+||.||+|++++ +..||||+++...... .+.+.+|+.+|.++. |||||++++++......+
T Consensus 38 ~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~ 117 (401)
T cd05107 38 NLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIY 117 (401)
T ss_pred HeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcE
Confidence 34566788999999999998642 4689999997643322 357889999999997 999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCC-------------------------------------------------------------
Q 010932 135 LVAQYMPNDTLSKHLFHWD------------------------------------------------------------- 153 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~------------------------------------------------------------- 153 (497)
+||||+++|+|.++++...
T Consensus 118 iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (401)
T cd05107 118 IITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKG 197 (401)
T ss_pred EEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchh
Confidence 9999999999999986421
Q ss_pred -----------------------------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC
Q 010932 154 -----------------------------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG 198 (497)
Q Consensus 154 -----------------------------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~ 198 (497)
...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrdlkp~NiLl~~~~ 276 (401)
T cd05107 198 TVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN-CVHRDLAARNVLICEGK 276 (401)
T ss_pred hhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-cCcccCCcceEEEeCCC
Confidence 124678889999999999999999998 99999999999999999
Q ss_pred CeeEcccCCccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccc
Q 010932 199 DPRLSSFGLMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLL 271 (497)
Q Consensus 199 ~~kl~Dfgla~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~ 271 (497)
.+||+|||+++..... ....+++.|+|||.+.+..++.++|||||||++|||++ |+.|+......... .
T Consensus 277 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~----~ 352 (401)
T cd05107 277 LVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQF----Y 352 (401)
T ss_pred EEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHH----H
Confidence 9999999998754321 12345678999999998889999999999999999998 77776443211110 1
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 272 LLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
..+........+...+..+.+|+.+||+.+|.+||++.+|+..|+.+.
T Consensus 353 ~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 353 NAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 111112222344456788999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-40 Score=315.79 Aligned_cols=252 Identities=19% Similarity=0.241 Sum_probs=201.6
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCc----EEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNR----LVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
++.+++.||.|+||+||+|.+. +|+ .||+|++...... ....+.+|+.++..++||||+++++++.. ...+++
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~ 86 (279)
T cd05109 8 ELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLV 86 (279)
T ss_pred heeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEE
Confidence 4567788899999999999864 354 4899998754332 24578899999999999999999999875 457899
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK- 215 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 215 (497)
+||+++|+|.+++... .+.+++..+..++.||+.||.|||+++ ++||||||+|||+++++.+||+|||+++......
T Consensus 87 ~~~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~-iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~ 164 (279)
T cd05109 87 TQLMPYGCLLDYVREN-KDRIGSQDLLNWCVQIAKGMSYLEEVR-LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET 164 (279)
T ss_pred EEcCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCCcEEECCCCceeecccccc
Confidence 9999999999998652 457899999999999999999999999 9999999999999999999999999988654322
Q ss_pred -----ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHH
Q 010932 216 -----SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQ 289 (497)
Q Consensus 216 -----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (497)
...+++.|+|||.+.+..++.++|||||||++|||++ |..|+........ ...+........+...+..
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 239 (279)
T cd05109 165 EYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI-----PDLLEKGERLPQPPICTID 239 (279)
T ss_pred eeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHHCCCcCCCCccCCHH
Confidence 1233567999999998889999999999999999998 7766543222111 1111111122233456778
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHhhhhhccc
Q 010932 290 LVELASKCLQYEAKDRPDVKFLLSAVAPLQKQT 322 (497)
Q Consensus 290 l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~ 322 (497)
+.+++.+||+.||+.|||+.++++.|..+...+
T Consensus 240 ~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 240 VYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 999999999999999999999999988876544
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-41 Score=329.48 Aligned_cols=241 Identities=20% Similarity=0.266 Sum_probs=205.6
Q ss_pred cCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCChhh
Q 010932 69 ESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSK 147 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 147 (497)
.||+|+||+||.|++.+ ...+|||.+........+-+..|+.+-+.++|.|||+++|.+..++.+-|.||-++||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 47999999999999765 67899999988776677889999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCCC--CHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC-CCCCeeEcccCCccccC----CCCccccC
Q 010932 148 HLFHWDKQPL--PWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD-EDGDPRLSSFGLMKNSR----DGKSYSTN 220 (497)
Q Consensus 148 ~l~~~~~~~l--~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~----~~~~~~gt 220 (497)
+|+. .=+++ ++..+-.+..||++||.|||++. |||||||-+||||+ -.|.+||+|||-++... -..++.||
T Consensus 662 LLrs-kWGPlKDNEstm~fYtkQILeGLkYLHen~-IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGT 739 (1226)
T KOG4279|consen 662 LLRS-KWGPLKDNESTMNFYTKQILEGLKYLHENK-IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGT 739 (1226)
T ss_pred HHHh-ccCCCccchhHHHHHHHHHHHHhhhhhhcc-eeeccccCCcEEEeeccceEEecccccchhhccCCccccccccc
Confidence 9965 23556 78899999999999999999998 99999999999997 67999999999877533 34578899
Q ss_pred CCCCCccccccC--CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhc
Q 010932 221 LAYTPPEFLRTG--RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCL 298 (497)
Q Consensus 221 ~~y~aPE~~~~~--~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 298 (497)
..|||||++..+ .|...+|||||||++.||.||++||....... ..+..+--....+++|...+.++..||.+|+
T Consensus 740 LQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq---AAMFkVGmyKvHP~iPeelsaeak~FilrcF 816 (1226)
T KOG4279|consen 740 LQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ---AAMFKVGMYKVHPPIPEELSAEAKNFILRCF 816 (1226)
T ss_pred hhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh---HhhhhhcceecCCCCcHHHHHHHHHHHHHHc
Confidence 999999999865 48999999999999999999998885432111 0011111223456788999999999999999
Q ss_pred ccCCCCCCCHHHHHHH
Q 010932 299 QYEAKDRPDVKFLLSA 314 (497)
Q Consensus 299 ~~dp~~Rps~~~ll~~ 314 (497)
..||.+||++.++|..
T Consensus 817 epd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 817 EPDPCDRPSAKDLLQD 832 (1226)
T ss_pred CCCcccCccHHHhccC
Confidence 9999999999999974
|
|
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-40 Score=317.44 Aligned_cols=257 Identities=19% Similarity=0.217 Sum_probs=206.5
Q ss_pred HHHHHhcCCCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCC
Q 010932 53 DLRAATNGFSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD 131 (497)
Q Consensus 53 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 131 (497)
++.+.....+.+++++.+|.|+||.||+|.... +..|++|++........+.+.+|+.+++.++||||+++++.+..+.
T Consensus 3 ~~~~~~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 82 (292)
T cd06644 3 HVRRDLDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDG 82 (292)
T ss_pred hhhcccCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC
Confidence 444445555678899999999999999999764 8999999997665445677899999999999999999999999999
Q ss_pred ceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcccc
Q 010932 132 ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS 211 (497)
Q Consensus 132 ~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 211 (497)
..++||||+++++|..++... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...
T Consensus 83 ~~~lv~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 160 (292)
T cd06644 83 KLWIMIEFCPGGAVDAIMLEL-DRGLTEPQIQVICRQMLEALQYLHSMK-IIHRDLKAGNVLLTLDGDIKLADFGVSAKN 160 (292)
T ss_pred eEEEEEecCCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhcCC-eeecCCCcceEEEcCCCCEEEccCccceec
Confidence 999999999999998877542 457899999999999999999999998 999999999999999999999999988653
Q ss_pred CCC----CccccCCCCCCccccc-----cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCC
Q 010932 212 RDG----KSYSTNLAYTPPEFLR-----TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282 (497)
Q Consensus 212 ~~~----~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (497)
... ....+++.|+|||++. ...++.++|||||||++|+|++|+.|+........... ......+ ....
T Consensus 161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-~~~~~~~--~~~~ 237 (292)
T cd06644 161 VKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK-IAKSEPP--TLSQ 237 (292)
T ss_pred cccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHH-HhcCCCc--cCCC
Confidence 322 2345788999999985 34468899999999999999999987754321111000 0000000 1112
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 283 ANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 283 ~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+...+..+.+++.+||+.||++||++.+++++
T Consensus 238 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 238 PSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred CcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 34456779999999999999999999999885
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=320.00 Aligned_cols=251 Identities=20% Similarity=0.296 Sum_probs=202.5
Q ss_pred cccccccCCCCCCcEEEEEEEc------CCcEEEEEEccCCCCC-ChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK------NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 134 (497)
++.+.+.+|+|+||.||++... .+..||||+++..... ..+.+.+|+.+++++ +||||+++++++...+..+
T Consensus 36 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 115 (302)
T cd05055 36 NLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPIL 115 (302)
T ss_pred HeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceE
Confidence 3456677899999999999742 2558999998754322 245789999999999 7999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
+||||+++++|.+++.......+++..+..++.+|+.||.|||+++ ++|+||||+|||++.++.++|+|||+++.....
T Consensus 116 lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~ 194 (302)
T cd05055 116 VITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNVLLTHGKIVKICDFGLARDIMND 194 (302)
T ss_pred EEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eehhhhccceEEEcCCCeEEECCCcccccccCC
Confidence 9999999999999997544445899999999999999999999999 999999999999999999999999998754332
Q ss_pred C------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHH
Q 010932 215 K------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287 (497)
Q Consensus 215 ~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (497)
. ...++..|+|||.+.+..++.++|||||||++|+|++ |..|+......... ............+...+
T Consensus 195 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 270 (302)
T cd05055 195 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKF----YKLIKEGYRMAQPEHAP 270 (302)
T ss_pred CceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHH----HHHHHcCCcCCCCCCCC
Confidence 2 2234678999999998899999999999999999998 88776543221111 11111111222233456
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHhhhh
Q 010932 288 TQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 288 ~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
..+.+|+.+||+.+|++|||+.++++.|+.+
T Consensus 271 ~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 271 AEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 7899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-40 Score=315.28 Aligned_cols=253 Identities=20% Similarity=0.308 Sum_probs=199.9
Q ss_pred ccccccCCCCCCcEEEEEEE-----cCCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeC--CceEE
Q 010932 64 ELIVSESGDKAPNVVYRGRL-----KNNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG--DERLL 135 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 135 (497)
+.+++.+|+|+||.||++.. .++..||+|.++.... .....+.+|+.+++.++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 85 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence 46788899999999999984 2478999999875432 2246799999999999999999999998775 56899
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK 215 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 215 (497)
||||++|++|.+++... ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||+++......
T Consensus 86 v~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~~i~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~ 163 (284)
T cd05079 86 IMEFLPSGSLKEYLPRN-KNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 163 (284)
T ss_pred EEEccCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccchheEEEcCCCCEEECCCccccccccCc
Confidence 99999999999998542 346899999999999999999999999 9999999999999999999999999987543321
Q ss_pred -------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHh-------c---ccccccccccc
Q 010932 216 -------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIR-------G---KNLLLLMDSSL 278 (497)
Q Consensus 216 -------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~-------~---~~~~~~~~~~~ 278 (497)
...++..|+|||++.+..++.++|||||||++|+|+|++.|.......... . ......+....
T Consensus 164 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (284)
T cd05079 164 EYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGK 243 (284)
T ss_pred cceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCc
Confidence 234566799999999888999999999999999999987543211000000 0 00000011111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhh
Q 010932 279 EGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 279 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
....+..++..+.+|+.+||+.||++|||+.++++.|+.+
T Consensus 244 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 244 RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 1223344677899999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-40 Score=310.65 Aligned_cols=248 Identities=23% Similarity=0.357 Sum_probs=205.8
Q ss_pred cccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 142 (497)
++.+.+.+|.|+||.||++..+++..||||.+.... ...+.+.+|+.+++.++||||+++++++......++||||+++
T Consensus 7 ~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 85 (261)
T cd05034 7 SLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSK 85 (261)
T ss_pred heeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCC
Confidence 456778889999999999998778889999987543 3457899999999999999999999999988899999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-----cc
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK-----SY 217 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 217 (497)
++|.+++.......+++..+..++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||++....... ..
T Consensus 86 ~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 164 (261)
T cd05034 86 GSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN-YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGA 164 (261)
T ss_pred CCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcchheEEEcCCCCEEECccccceeccchhhhhhhcc
Confidence 99999997655567999999999999999999999999 9999999999999999999999999987654321 12
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
..+..|+|||.+.+..++.++|||||||++|+|++ |+.||.......... .+........+...+..+.+++.+
T Consensus 165 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~ 239 (261)
T cd05034 165 KFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLE-----QVERGYRMPRPPNCPEELYDLMLQ 239 (261)
T ss_pred CCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHHcCCCCCCCCCCCHHHHHHHHH
Confidence 23567999999998889999999999999999999 887775432221111 111111222334456789999999
Q ss_pred hcccCCCCCCCHHHHHHHhhh
Q 010932 297 CLQYEAKDRPDVKFLLSAVAP 317 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~l~~ 317 (497)
||+.+|++|||+.++++.|+.
T Consensus 240 ~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 240 CWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HcccCcccCCCHHHHHHHHhc
Confidence 999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-40 Score=317.25 Aligned_cols=251 Identities=18% Similarity=0.280 Sum_probs=203.2
Q ss_pred ccccccCCCCCCcEEEEEEEc------CCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLK------NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
+++.+.+|+|+||.||+|... ....+++|.+..... ...+.+.+|+.+++.++||||+++++.+...+..++|
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI 81 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence 356678899999999999863 235799999875432 2245789999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEe
Q 010932 137 AQYMPNDTLSKHLFHWD----------------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill 194 (497)
+||+.+++|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+|||+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-ivH~dikp~nill 160 (290)
T cd05045 82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK-LVHRDLAARNVLV 160 (290)
T ss_pred EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC-eehhhhhhheEEE
Confidence 99999999999875421 235889999999999999999999999 9999999999999
Q ss_pred CCCCCeeEcccCCccccCCCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhc
Q 010932 195 DEDGDPRLSSFGLMKNSRDGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRG 267 (497)
Q Consensus 195 ~~~~~~kl~Dfgla~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~ 267 (497)
++++.+||+|||+++...... ...++..|+|||.+.+..++.++||||||+++|+|++ |..|+.......+
T Consensus 161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-- 238 (290)
T cd05045 161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERL-- 238 (290)
T ss_pred cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHH--
Confidence 999999999999987543221 2234678999999988889999999999999999999 8877654332221
Q ss_pred cccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 268 KNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
............+...+..+.+++.+||+.+|++||++.++++.|+.+..
T Consensus 239 ---~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 239 ---FNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred ---HHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 11222222223344566789999999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-40 Score=318.10 Aligned_cols=254 Identities=19% Similarity=0.255 Sum_probs=208.9
Q ss_pred HHHHhcCCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCc
Q 010932 54 LRAATNGFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132 (497)
Q Consensus 54 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 132 (497)
+....+....+.+++.||.|+||.||++... +|+.||+|.+........+.+.+|+.+++.++||||+++++++..+..
T Consensus 11 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~ 90 (297)
T cd06656 11 IVSVGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE 90 (297)
T ss_pred hcccCChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCE
Confidence 3334444567788899999999999999974 599999999976655556778999999999999999999999999999
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
.++||||+++++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||++....
T Consensus 91 ~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~~~-i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~ 166 (297)
T cd06656 91 LWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALDFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 166 (297)
T ss_pred EEEeecccCCCCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEECcCccceEcc
Confidence 999999999999999985 356899999999999999999999999 9999999999999999999999999987543
Q ss_pred CC----CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHH
Q 010932 213 DG----KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288 (497)
Q Consensus 213 ~~----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (497)
.. ....+++.|+|||.+.+..++.++|||||||++|+|++|..||......... .............+...+.
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 243 (297)
T cd06656 167 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL---YLIATNGTPELQNPERLSA 243 (297)
T ss_pred CCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhe---eeeccCCCCCCCCccccCH
Confidence 32 2346788999999999888999999999999999999999887543211100 0000111111123344567
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+.+++.+||+.+|++|||+.+++++
T Consensus 244 ~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 244 VFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 78999999999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-40 Score=323.11 Aligned_cols=249 Identities=20% Similarity=0.204 Sum_probs=196.9
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC---CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
++.+++.||+|+||+||++... +++.||||++.... ....+.+.+|+.++..++|+||+.+++++.++++.++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD 81 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence 4678888999999999999976 48999999986421 2234568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC---
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--- 215 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 215 (497)
|+++++|.+++... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (331)
T cd05597 82 YYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQLG-YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ 159 (331)
T ss_pred cCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcc
Confidence 99999999998642 457899999999999999999999999 9999999999999999999999999987543322
Q ss_pred --ccccCCCCCCcccccc-----CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHH
Q 010932 216 --SYSTNLAYTPPEFLRT-----GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288 (497)
Q Consensus 216 --~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (497)
...||+.|+|||++.. ..++.++|||||||++|+|++|+.||.............. ..............+.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~ 238 (331)
T cd05597 160 SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN-HKEHFQFPPDVTDVSE 238 (331)
T ss_pred ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHc-CCCcccCCCccCCCCH
Confidence 2458999999999873 4578899999999999999999998865432221111000 0000000111123567
Q ss_pred HHHHHHHHhcccCCCC--CCCHHHHHHH
Q 010932 289 QLVELASKCLQYEAKD--RPDVKFLLSA 314 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~--Rps~~~ll~~ 314 (497)
.+.+++.+||..++++ ||++.+++++
T Consensus 239 ~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 239 EAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred HHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 8999999988654443 7899999997
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=312.17 Aligned_cols=248 Identities=20% Similarity=0.300 Sum_probs=199.1
Q ss_pred cccccCCCCCCcEEEEEEEcC----CcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCc------
Q 010932 65 LIVSESGDKAPNVVYRGRLKN----NRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE------ 132 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~------ 132 (497)
.+.+.+|+|+||.||+|.+.. +..||||+++...... ...+.+|+..++.++||||+++++++.....
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 81 (273)
T cd05035 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK 81 (273)
T ss_pred ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence 456778999999999998642 4789999987543322 3578999999999999999999998866544
Q ss_pred eEEEEEcCCCCChhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCc
Q 010932 133 RLLVAQYMPNDTLSKHLFHW----DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLM 208 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~----~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 208 (497)
.++|+||+++++|..++... ....+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||++
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN-FIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchheEEECCCCeEEECCccce
Confidence 79999999999999888542 2346899999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCC
Q 010932 209 KNSRDGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQ 281 (497)
Q Consensus 209 ~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (497)
+...... ....+..|+|||.+.+..++.++|||||||++|||++ |..|+......... ..+.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~-----~~~~~~~~~~ 235 (273)
T cd05035 161 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIY-----DYLRHGNRLK 235 (273)
T ss_pred eeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHcCCCCC
Confidence 8654322 1234568999999988889999999999999999999 66666443222111 1111111223
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhh
Q 010932 282 YANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 282 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
.+..++..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 236 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 236 QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 3455678899999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-40 Score=315.18 Aligned_cols=247 Identities=19% Similarity=0.299 Sum_probs=199.1
Q ss_pred ccccccCCCCCCcEEEEEEEcC------CcEEEEEEccCCCCCC-hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
+.+++.+|+|+||.||+|.+.+ +..||+|.+....... ...|.+|+.+++.++|+||+++++++.+....++|
T Consensus 8 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 87 (277)
T cd05036 8 ITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFIL 87 (277)
T ss_pred cEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEE
Confidence 4667788999999999999753 5689999886543222 34689999999999999999999999998899999
Q ss_pred EEcCCCCChhhhhhcCCC-----CCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC---CeeEcccCCc
Q 010932 137 AQYMPNDTLSKHLFHWDK-----QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG---DPRLSSFGLM 208 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~-----~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~---~~kl~Dfgla 208 (497)
|||+++++|.+++..... ..+++..+..++.||+.||.|||+++ ++|+||||+||+++.++ .+||+|||++
T Consensus 88 ~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~nil~~~~~~~~~~kl~dfg~~ 166 (277)
T cd05036 88 LELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH-FIHRDIAARNCLLTCKGPGRVAKIADFGMA 166 (277)
T ss_pred EecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchheEEEeccCCCcceEeccCccc
Confidence 999999999999865321 25899999999999999999999999 99999999999998654 5999999999
Q ss_pred cccCCCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCC
Q 010932 209 KNSRDGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQ 281 (497)
Q Consensus 209 ~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (497)
+...... ....+..|+|||++.+..++.++|||||||++|+|++ |..||........ ...+.......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~-----~~~~~~~~~~~ 241 (277)
T cd05036 167 RDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEV-----MEFVTGGGRLD 241 (277)
T ss_pred cccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHHcCCcCC
Confidence 8653221 1222457999999998899999999999999999997 7777654322211 11111112223
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 010932 282 YANEDATQLVELASKCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 282 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~ 316 (497)
.+...+..+.+++.+||+.+|++|||+.+|+++|+
T Consensus 242 ~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 242 PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 44556778999999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-40 Score=317.52 Aligned_cols=252 Identities=17% Similarity=0.226 Sum_probs=199.5
Q ss_pred cccccccCCCCCCcEEEEEEEcC-----------------CcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeee
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN-----------------NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLI 124 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~ 124 (497)
.+.+++.+|+|+||.||++...+ +..||+|++...... ..+.+.+|++++++++||||++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 85 (296)
T cd05051 6 PLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLL 85 (296)
T ss_pred hCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 56788899999999999998643 246899998755332 346789999999999999999999
Q ss_pred eeeeeCCceEEEEEcCCCCChhhhhhcCC---------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC
Q 010932 125 GCCAEGDERLLVAQYMPNDTLSKHLFHWD---------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD 195 (497)
Q Consensus 125 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~ 195 (497)
+++..+...++||||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~-i~H~dlkp~Nili~ 164 (296)
T cd05051 86 GVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN-FVHRDLATRNCLVG 164 (296)
T ss_pred EEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhceeec
Confidence 99999999999999999999999986532 126899999999999999999999999 99999999999999
Q ss_pred CCCCeeEcccCCccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh--CCCCCCchhhHHHhc
Q 010932 196 EDGDPRLSSFGLMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS--GKHIPPSHALDVIRG 267 (497)
Q Consensus 196 ~~~~~kl~Dfgla~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt--g~~~~~~~~~~~~~~ 267 (497)
.++.++|+|||+++..... ....+++.|+|||++.+..++.++|||||||++|||++ |..|+..........
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~ 244 (296)
T cd05051 165 KNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIE 244 (296)
T ss_pred CCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHH
Confidence 9999999999998754322 22345678999999998889999999999999999998 444443221111100
Q ss_pred cccccc---cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 010932 268 KNLLLL---MDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 268 ~~~~~~---~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~ 316 (497)
. .... .........+...+.++.+++.+||+.||++|||+.+|++.|+
T Consensus 245 ~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 245 N-AGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred H-HHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 0 0000 0111111223445678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-40 Score=313.05 Aligned_cols=247 Identities=17% Similarity=0.175 Sum_probs=199.5
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
.+.+++.||.|+||.||++... +++.||+|+++.........+.+|+.+++.++||||+++++.+...+..++||||++
T Consensus 10 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 89 (267)
T cd06645 10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCG 89 (267)
T ss_pred HHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccC
Confidence 4567778899999999999975 589999999976554445678899999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----Ccc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KSY 217 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 217 (497)
+++|.+++.. .+.+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ...
T Consensus 90 ~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 166 (267)
T cd06645 90 GGSLQDIYHV--TGPLSESQIAYVSRETLQGLYYLHSKG-KMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSF 166 (267)
T ss_pred CCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccc
Confidence 9999998865 467999999999999999999999999 999999999999999999999999998654322 345
Q ss_pred ccCCCCCCccccc---cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccc-cccccccccCCCCCHHHHHHHHHH
Q 010932 218 STNLAYTPPEFLR---TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKN-LLLLMDSSLEGQYANEDATQLVEL 293 (497)
Q Consensus 218 ~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l 293 (497)
.|++.|+|||++. ...++.++|||||||++|+|++|..|+............ ......+... .....+..+.++
T Consensus 167 ~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l 244 (267)
T cd06645 167 IGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLK--DKMKWSNSFHHF 244 (267)
T ss_pred cCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCccc--ccCCCCHHHHHH
Confidence 6889999999974 456889999999999999999999876433211110000 0000001000 011245678999
Q ss_pred HHHhcccCCCCCCCHHHHHHH
Q 010932 294 ASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 294 i~~cl~~dp~~Rps~~~ll~~ 314 (497)
+.+||+.+|++|||+.+|+++
T Consensus 245 i~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 245 VKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred HHHHccCCchhCcCHHHHhcC
Confidence 999999999999999999874
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-40 Score=332.01 Aligned_cols=243 Identities=20% Similarity=0.187 Sum_probs=191.8
Q ss_pred cccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
.+.+.+.||.|+||.||++.+.. ++.||||.... ..+.+|+++|++++|+|||++++++..+...++|||++.
T Consensus 170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~ 243 (461)
T PHA03211 170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR 243 (461)
T ss_pred CeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC
Confidence 46777889999999999999865 88999996432 346789999999999999999999999999999999994
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC------C
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG------K 215 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------~ 215 (497)
++|..++... ...+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 244 -~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 320 (461)
T PHA03211 244 -SDLYTYLGAR-LRPLGLAQVTAVARQLLSAIDYIHGEG-IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHY 320 (461)
T ss_pred -CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-EEECcCCHHHEEECCCCCEEEcccCCceeccccccccccc
Confidence 6888887542 347999999999999999999999999 999999999999999999999999998754322 1
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchh------------hHHHhccccc-ccccc------
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA------------LDVIRGKNLL-LLMDS------ 276 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~------------~~~~~~~~~~-~~~~~------ 276 (497)
...||+.|+|||++.+..++.++|||||||+||||++|..++.... ...+...... ..+..
T Consensus 321 ~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l 400 (461)
T PHA03211 321 GIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRL 400 (461)
T ss_pred ccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHH
Confidence 3468999999999999999999999999999999999876543211 0111110000 00000
Q ss_pred ----------ccCCCC-----C--HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 277 ----------SLEGQY-----A--NEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 277 ----------~~~~~~-----~--~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
...... . ...+..+.+||.+||+.||.+|||+.|+|++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 401 VSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000000 0 0223478899999999999999999999986
|
|
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-40 Score=320.20 Aligned_cols=253 Identities=18% Similarity=0.303 Sum_probs=203.6
Q ss_pred CcccccccCCCCCCcEEEEEEEc--------CCcEEEEEEccCCC-CCChhHHHHHHHHhccC-CCCcceeeeeeeeeCC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK--------NNRLVAIKRFSRQS-WPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGD 131 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 131 (497)
..+.+.+.+|+|+||.||++... ++..||+|.+.... ....+.+.+|+.+++.+ +||||+++++++....
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 94 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 94 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCC
Confidence 34567788899999999999741 24579999987542 22346789999999999 8999999999999999
Q ss_pred ceEEEEEcCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC
Q 010932 132 ERLLVAQYMPNDTLSKHLFHWD--------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197 (497)
Q Consensus 132 ~~~lv~e~~~~~~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~ 197 (497)
..++||||+++++|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.+
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nili~~~ 173 (304)
T cd05101 95 PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK-CIHRDLAARNVLVTEN 173 (304)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC-eeecccccceEEEcCC
Confidence 9999999999999999986532 235788999999999999999999999 9999999999999999
Q ss_pred CCeeEcccCCccccCCCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhcccc
Q 010932 198 GDPRLSSFGLMKNSRDGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNL 270 (497)
Q Consensus 198 ~~~kl~Dfgla~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~ 270 (497)
+.+||+|||+++...... ...+++.|+|||++.+..++.++||||||+++|+|++ |..|+.......+..
T Consensus 174 ~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~--- 250 (304)
T cd05101 174 NVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK--- 250 (304)
T ss_pred CcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHH---
Confidence 999999999998654321 1234567999999998889999999999999999998 666654432222111
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 271 LLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
.+........+..++..+.+|+.+||+.+|.+|||+.++++.|+.+..
T Consensus 251 --~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 251 --LLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred --HHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 111111222344567789999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-40 Score=313.94 Aligned_cols=248 Identities=21% Similarity=0.315 Sum_probs=201.7
Q ss_pred cccccccCCCCCCcEEEEEEEcC------CcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
.+.+.+.+|.|+||.||+|..++ +..||+|.+..... .....+.+|+.+|+.++||||+++++++......++
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~ 86 (277)
T cd05032 7 KITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLV 86 (277)
T ss_pred HeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEE
Confidence 45677889999999999998743 36899999875432 223568899999999999999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCC
Q 010932 136 VAQYMPNDTLSKHLFHWD--------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGL 207 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~--------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 207 (497)
||||+++++|.+++.... ...+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||+
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~di~p~nill~~~~~~kl~dfg~ 165 (277)
T cd05032 87 VMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK-FVHRDLAARNCMVAEDLTVKIGDFGM 165 (277)
T ss_pred EEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccChheEEEcCCCCEEECCccc
Confidence 999999999999986422 234788999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCC
Q 010932 208 MKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEG 280 (497)
Q Consensus 208 a~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (497)
++..... ....++..|+|||.+.+..++.++|||||||++|||+| |..|+.......... .+......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~-----~~~~~~~~ 240 (277)
T cd05032 166 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLK-----FVIDGGHL 240 (277)
T ss_pred chhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHH-----HHhcCCCC
Confidence 8754322 22345678999999988889999999999999999998 777765432222111 11111122
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 010932 281 QYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 281 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~ 316 (497)
..+..++..+.+++.+||+.+|++|||+.++++.|+
T Consensus 241 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 241 DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 334456788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-40 Score=320.05 Aligned_cols=251 Identities=21% Similarity=0.320 Sum_probs=198.2
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
...|.+++.||+|+||.||+|..+ +++.||||+++..... ....+.+|+.+++.++||||+++++++..++..++|||
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 84 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE 84 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence 355788899999999999999976 4889999998754322 23468899999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---- 214 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 214 (497)
|+++ +|.+++... +..+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 161 (309)
T cd07872 85 YLDK-DLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTY 161 (309)
T ss_pred CCCC-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECccccceecCCCcccc
Confidence 9975 788877542 456899999999999999999999999 999999999999999999999999998754322
Q ss_pred CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccc-----------------cccccc
Q 010932 215 KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNL-----------------LLLMDS 276 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~-----------------~~~~~~ 276 (497)
....+|+.|+|||++.+ ..++.++|||||||++|+|+||+.||............. ....+.
T Consensus 162 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
T cd07872 162 SNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNY 241 (309)
T ss_pred ccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhh
Confidence 23456889999999865 458899999999999999999998886542211100000 000000
Q ss_pred ccCC-------CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 277 SLEG-------QYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 277 ~~~~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.... ......+.++.+|+.+||+.||.+|||+.+++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 242 NFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred hcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 0000 0112346678999999999999999999999985
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-40 Score=308.45 Aligned_cols=241 Identities=25% Similarity=0.375 Sum_probs=198.4
Q ss_pred cCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCC-hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCChhh
Q 010932 69 ESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSK 147 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 147 (497)
.||+|+||.||+|...++..||+|++....... ...+.+|+.+++.++||||+++++++...+..++||||+++++|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 469999999999998788999999987543222 3468899999999999999999999999999999999999999999
Q ss_pred hhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-----ccccCCC
Q 010932 148 HLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK-----SYSTNLA 222 (497)
Q Consensus 148 ~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~~gt~~ 222 (497)
++... ...+++..+..++.+++.+|.|+|+.+ ++|+||||+||+++.++.++|+|||++....... ...+++.
T Consensus 82 ~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~ 159 (250)
T cd05085 82 FLRKK-KDELKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIK 159 (250)
T ss_pred HHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCccc
Confidence 88643 456899999999999999999999999 9999999999999999999999999987543321 1233567
Q ss_pred CCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccC
Q 010932 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYE 301 (497)
Q Consensus 223 y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 301 (497)
|+|||++.+..++.++|||||||++|+|++ |..||.......... .+........+...+..+.+++.+||+.+
T Consensus 160 y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 234 (250)
T cd05085 160 WTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQARE-----QVEKGYRMSCPQKCPDDVYKVMQRCWDYK 234 (250)
T ss_pred ccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH-----HHHcCCCCCCCCCCCHHHHHHHHHHcccC
Confidence 999999998889999999999999999998 887775443222111 11111222334456778999999999999
Q ss_pred CCCCCCHHHHHHHhh
Q 010932 302 AKDRPDVKFLLSAVA 316 (497)
Q Consensus 302 p~~Rps~~~ll~~l~ 316 (497)
|++|||+.++++.|.
T Consensus 235 p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 235 PENRPKFSELQKELA 249 (250)
T ss_pred cccCCCHHHHHHHhc
Confidence 999999999998864
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-40 Score=312.37 Aligned_cols=247 Identities=21% Similarity=0.313 Sum_probs=195.3
Q ss_pred ccccCCCCCCcEEEEEEEcC-Cc--EEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeC------CceE
Q 010932 66 IVSESGDKAPNVVYRGRLKN-NR--LVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG------DERL 134 (497)
Q Consensus 66 ~~~~lg~G~~g~V~~~~~~~-~~--~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~ 134 (497)
+.+.||+|+||.||+|.+.+ +. .||+|.++.... ...+.+.+|+.+++.++||||+++++++... ...+
T Consensus 3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 82 (272)
T cd05075 3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPV 82 (272)
T ss_pred cccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcE
Confidence 45678999999999999764 33 699999875432 2246789999999999999999999987432 2468
Q ss_pred EEEEcCCCCChhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccc
Q 010932 135 LVAQYMPNDTLSKHLFHW----DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN 210 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~----~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 210 (497)
+||||+++++|.+++... ....+++..+..++.||+.||.|||+++ ++||||||+|||++.++.++|+|||+++.
T Consensus 83 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 161 (272)
T cd05075 83 VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS-FIHRDLAARNCMLNENMNVCVADFGLSKK 161 (272)
T ss_pred EEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhheEEcCCCCEEECCCCcccc
Confidence 999999999999887421 2345899999999999999999999999 99999999999999999999999999886
Q ss_pred cCCCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCC
Q 010932 211 SRDGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYA 283 (497)
Q Consensus 211 ~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (497)
..... ...+++.|++||++.+..++.++|||||||++|||++ |+.|+.......... .+........+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~ 236 (272)
T cd05075 162 IYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYD-----YLRQGNRLKQP 236 (272)
T ss_pred cCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH-----HHHcCCCCCCC
Confidence 54321 2234678999999998889999999999999999999 676665432221111 11111111233
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhh
Q 010932 284 NEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 284 ~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
...+..+.+++.+||+.||++|||+.+|++.|+.+
T Consensus 237 ~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 237 PDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 45667799999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-40 Score=322.17 Aligned_cols=248 Identities=18% Similarity=0.179 Sum_probs=193.5
Q ss_pred ccccCCCC--CCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 66 IVSESGDK--APNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 66 ~~~~lg~G--~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
+++.||+| +|++||++..+ +|+.||||++...... ..+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45667888 68899999975 5999999999754322 2346788999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC------
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG------ 214 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------ 214 (497)
++++|.+++.......+++..+..++.|++.||.|||+++ ++||||||+|||++.++.++++||+........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRV 160 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCChhhEEEecCCcEEEcccchhhccccccccccc
Confidence 9999999996544567999999999999999999999999 999999999999999999999999865432111
Q ss_pred -----CccccCCCCCCcccccc--CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc----cccccccc-------
Q 010932 215 -----KSYSTNLAYTPPEFLRT--GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK----NLLLLMDS------- 276 (497)
Q Consensus 215 -----~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~----~~~~~~~~------- 276 (497)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||........... ......+.
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (327)
T cd08227 161 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEE 240 (327)
T ss_pred cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhh
Confidence 12245677999999976 4589999999999999999999998754321111000 00000000
Q ss_pred -----------------------------ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 277 -----------------------------SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 277 -----------------------------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..........++.+.+|+.+||+.||++|||+.+++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 241 LTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred cccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 00001122345689999999999999999999999985
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-40 Score=314.60 Aligned_cols=246 Identities=19% Similarity=0.215 Sum_probs=200.2
Q ss_pred ccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCC
Q 010932 64 ELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 142 (497)
+.+++.||.|+||.||++.... +..+++|.+........+.+.+|+++++.++||||+++++++..++..++|+||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 4677889999999999999764 888999998765544456789999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----Cccc
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KSYS 218 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~ 218 (497)
++|..++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||++...... ....
T Consensus 87 ~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~~-i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 164 (282)
T cd06643 87 GAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHENK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI 164 (282)
T ss_pred CcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEccCCCEEEcccccccccccccccccccc
Confidence 999888754 2457999999999999999999999999 999999999999999999999999998754322 3356
Q ss_pred cCCCCCCccccc-----cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHH
Q 010932 219 TNLAYTPPEFLR-----TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVEL 293 (497)
Q Consensus 219 gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 293 (497)
+++.|+|||++. +..++.++|||||||++|+|++|+.||............ .... ......+...+..+.+|
T Consensus 165 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~l 241 (282)
T cd06643 165 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKI-AKSE--PPTLAQPSRWSSEFKDF 241 (282)
T ss_pred ccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHH-hhcC--CCCCCCccccCHHHHHH
Confidence 788999999984 345788999999999999999999877543211111110 0000 00112234456789999
Q ss_pred HHHhcccCCCCCCCHHHHHHH
Q 010932 294 ASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 294 i~~cl~~dp~~Rps~~~ll~~ 314 (497)
+.+||+.||.+|||+.+++++
T Consensus 242 i~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 242 LKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred HHHHccCChhhCcCHHHHhcC
Confidence 999999999999999999876
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-40 Score=310.96 Aligned_cols=244 Identities=18% Similarity=0.220 Sum_probs=200.6
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-----ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-----DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
+.+.+.+|.|++|.||++... +++.||+|++...... ..+.+.+|+.++++++||||+++++++......++|+
T Consensus 4 ~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 83 (263)
T cd06625 4 WRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFM 83 (263)
T ss_pred ccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEE
Confidence 345566799999999999975 5899999998654321 1346889999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 214 (497)
||+++++|.+++.. .+.+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||+++.....
T Consensus 84 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~ 160 (263)
T cd06625 84 EYMPGGSVKDQLKA--YGALTETVTRKYTRQILEGVEYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSS 160 (263)
T ss_pred EECCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceeccccccc
Confidence 99999999999865 457899999999999999999999999 999999999999999999999999998754322
Q ss_pred ----CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHH
Q 010932 215 ----KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290 (497)
Q Consensus 215 ----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (497)
....++..|+|||++.+..++.++||||||+++|+|++|+.||......... ............+...+..+
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 236 (263)
T cd06625 161 GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAI----FKIATQPTNPQLPSHVSPDA 236 (263)
T ss_pred cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHH----HHHhccCCCCCCCccCCHHH
Confidence 2345678899999999888999999999999999999999887442211111 11111112233455567789
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHH
Q 010932 291 VELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 291 ~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+++.+||..+|.+|||+.+++++
T Consensus 237 ~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 237 RNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred HHHHHHHhhcCcccCCCHHHHhhC
Confidence 999999999999999999999986
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=315.66 Aligned_cols=242 Identities=20% Similarity=0.257 Sum_probs=210.9
Q ss_pred cccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 65 LIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
.+-+.||+|.|.+|-++++- +|..||||++.+..... ...+.+|+..|+-++|||||++|.+..+...+|||+|.-+
T Consensus 21 DLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD 100 (864)
T KOG4717|consen 21 DLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGD 100 (864)
T ss_pred hhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecC
Confidence 34456799999999999964 79999999998765544 4578999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC-CCCCeeEcccCCccccCCC---Ccc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD-EDGDPRLSSFGLMKNSRDG---KSY 217 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~~---~~~ 217 (497)
+|+|.++|-++ ...+.+....+++.||+.|+.|+|... +|||||||+||.+- .-|.|||+|||++....++ .+.
T Consensus 101 ~GDl~DyImKH-e~Gl~E~La~kYF~QI~~AI~YCHqLH-VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~Ts 178 (864)
T KOG4717|consen 101 GGDLFDYIMKH-EEGLNEDLAKKYFAQIVHAISYCHQLH-VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTS 178 (864)
T ss_pred CchHHHHHHhh-hccccHHHHHHHHHHHHHHHHHHhhhh-hhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcc
Confidence 99999999775 568999999999999999999999998 99999999998775 6799999999999877666 467
Q ss_pred ccCCCCCCccccccCCCC-cccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 218 STNLAYTPPEFLRTGRVI-PESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~-~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
+|+..|-|||++.+..|+ ++.|||||||+||.|++|+.||...+... .+..++|... ..|...+.++.+||..
T Consensus 179 CGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE----TLTmImDCKY--tvPshvS~eCrdLI~s 252 (864)
T KOG4717|consen 179 CGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE----TLTMIMDCKY--TVPSHVSKECRDLIQS 252 (864)
T ss_pred cchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh----hhhhhhcccc--cCchhhhHHHHHHHHH
Confidence 899999999999999985 57999999999999999999986654332 2344555543 5688899999999999
Q ss_pred hcccCCCCCCCHHHHHHH
Q 010932 297 CLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~ 314 (497)
||..||++|.|.++|...
T Consensus 253 MLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 253 MLVRDPKKRASLEEIVST 270 (864)
T ss_pred HHhcCchhhccHHHHhcc
Confidence 999999999999999874
|
|
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-40 Score=327.20 Aligned_cols=248 Identities=21% Similarity=0.248 Sum_probs=195.1
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeC------C
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEG------D 131 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~ 131 (497)
.+.+.+++.||+|+||.||++... .++.||||++...... ....+.+|+.+++.++||||+++++++... .
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 95 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQ 95 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccc
Confidence 356778889999999999999975 4899999999754322 245788999999999999999999988643 3
Q ss_pred ceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcccc
Q 010932 132 ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS 211 (497)
Q Consensus 132 ~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 211 (497)
..++||||+++ +|.+.+. ..+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++..
T Consensus 96 ~~~lv~e~~~~-~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDikp~Nill~~~~~~kl~Dfg~~~~~ 169 (355)
T cd07874 96 DVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTA 169 (355)
T ss_pred eeEEEhhhhcc-cHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEECCCCCEEEeeCcccccC
Confidence 47999999965 5766663 35889999999999999999999999 999999999999999999999999999865
Q ss_pred CCC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc------------------cc
Q 010932 212 RDG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK------------------NL 270 (497)
Q Consensus 212 ~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~------------------~~ 270 (497)
... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||........... ..
T Consensus 170 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (355)
T cd07874 170 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 249 (355)
T ss_pred CCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHH
Confidence 433 345688999999999988999999999999999999999998864321110000 00
Q ss_pred cccccc---------------cc---CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 271 LLLMDS---------------SL---EGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 271 ~~~~~~---------------~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
...+.. .. ....+...+..+.+|+.+||+.||++|||+.+++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 000000 00 001112234678999999999999999999999986
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=330.38 Aligned_cols=247 Identities=17% Similarity=0.180 Sum_probs=194.7
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeCC-----ceEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD-----ERLL 135 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~l 135 (497)
+.+++.||+|+||+||++... +|+.||||++..... ...+.+.+|+.+|+.++||||+++++++.... ..++
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 81 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV 81 (372)
T ss_pred CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence 356778899999999999975 599999999865322 23457899999999999999999999998776 7899
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG- 214 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 214 (497)
|+||+. ++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 82 v~e~~~-~~l~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~ 157 (372)
T cd07853 82 VTELMQ-SDLHKIIVS--PQPLSSDHVKVFLYQILRGLKYLHSAG-ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE 157 (372)
T ss_pred Eeeccc-cCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHHEEECCCCCEEeccccceeecccCc
Confidence 999996 578777754 567999999999999999999999999 999999999999999999999999998754322
Q ss_pred ----CccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccc------------------cc
Q 010932 215 ----KSYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKN------------------LL 271 (497)
Q Consensus 215 ----~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~------------------~~ 271 (497)
....+|+.|+|||++.+. .++.++|||||||++|||++|+.||............ ..
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 237 (372)
T cd07853 158 SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGAR 237 (372)
T ss_pred cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHH
Confidence 223568899999999864 4789999999999999999999888543211100000 00
Q ss_pred -cccccccC-------CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 272 -LLMDSSLE-------GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 272 -~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+...... .......++.+.+|+.+||+.||++|||+.+++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 238 AHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 00000000 01122346778999999999999999999999986
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=310.25 Aligned_cols=247 Identities=19% Similarity=0.223 Sum_probs=189.9
Q ss_pred ccCCCCCCcEEEEEEEcC---CcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 68 SESGDKAPNVVYRGRLKN---NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
+.||+|+||.||+|.+.+ +..+|+|.++..... ....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 357999999999998643 467999998755432 2347889999999999999999999999988999999999999
Q ss_pred ChhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC------
Q 010932 144 TLSKHLFHWD---KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG------ 214 (497)
Q Consensus 144 ~L~~~l~~~~---~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------ 214 (497)
+|.+++.... ....++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++.....
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN-FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTP 159 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEECCccccccccCcceeecC
Confidence 9999986422 234677788899999999999999999 999999999999999999999999998754322
Q ss_pred CccccCCCCCCccccccC-------CCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHH
Q 010932 215 KSYSTNLAYTPPEFLRTG-------RVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANED 286 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~~-------~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (497)
....++..|+|||++.+. .++.++|||||||++|||++ |+.||.............................
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05087 160 DQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPL 239 (269)
T ss_pred CCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCC
Confidence 123456789999998642 35789999999999999996 8877754322221111111000000111112234
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 010932 287 ATQLVELASKCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 287 ~~~l~~li~~cl~~dp~~Rps~~~ll~~l~ 316 (497)
+..+.+++.+|| .+|++|||+.+|+..|.
T Consensus 240 ~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 240 SDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred ChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 567889999999 58999999999998764
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=317.38 Aligned_cols=250 Identities=18% Similarity=0.235 Sum_probs=200.7
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
++.+++.||+|+||.||++.+. +|..+|+|.+...... ...++.+|++++++++||||+++++++..++..++||||+
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~ 81 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM 81 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence 3567788999999999999976 4889999998754322 2356889999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCcccccCCCcceEeCCCCCeeEcccCCccccCC--CCcc
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQ-NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD--GKSY 217 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--~~~~ 217 (497)
++++|.+++.. ...+++..+..++.||+.||.|||+. + ++|+||||+|||++.++.++|+|||++..... ....
T Consensus 82 ~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (308)
T cd06615 82 DGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 158 (308)
T ss_pred CCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhCC-EEECCCChHHEEEecCCcEEEccCCCcccccccccccC
Confidence 99999999965 46789999999999999999999984 6 99999999999999999999999999875433 2345
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhc---cccccccc-------------------
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRG---KNLLLLMD------------------- 275 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~---~~~~~~~~------------------- 275 (497)
.+++.|+|||.+.+..++.++|||||||++|+|++|+.|+.......... ........
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (308)
T cd06615 159 VGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMA 238 (308)
T ss_pred CCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhh
Confidence 67899999999988889999999999999999999998875432111110 00000000
Q ss_pred ------c---ccCCCCC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010932 276 ------S---SLEGQYA-NEDATQLVELASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 276 ------~---~~~~~~~-~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l 315 (497)
. ......+ ...+.++.+|+.+||+.||++|||+.+++++-
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 239 IFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred HHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 0 0000011 12456799999999999999999999999974
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-40 Score=314.76 Aligned_cols=244 Identities=18% Similarity=0.243 Sum_probs=196.2
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
+.+++.||+|+||.||+|.+. +++.||+|++...... ..+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 82 (279)
T cd06619 3 IQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMD 82 (279)
T ss_pred chheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCC
Confidence 466778899999999999964 5899999998654322 23568899999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--Ccccc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KSYST 219 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~~g 219 (497)
+++|..+ ..+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||++...... ....+
T Consensus 83 ~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~ 155 (279)
T cd06619 83 GGSLDVY------RKIPEHVLGRIAVAVVKGLTYLWSLK-ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVG 155 (279)
T ss_pred CCChHHh------hcCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCC
Confidence 9998654 25788899999999999999999999 999999999999999999999999998754432 34578
Q ss_pred CCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHh--ccc-cccccccccCCCCCHHHHHHHHHHHHH
Q 010932 220 NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIR--GKN-LLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 220 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
|..|+|||++.+..++.++|||||||++|+|++|+.||......... ... .....+...........++.+.+++.+
T Consensus 156 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 235 (279)
T cd06619 156 TNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQ 235 (279)
T ss_pred ChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHH
Confidence 89999999999888999999999999999999999887532110000 000 000011111111122345679999999
Q ss_pred hcccCCCCCCCHHHHHHH
Q 010932 297 CLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~ 314 (497)
||+.+|++||++.+++++
T Consensus 236 ~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 236 CMRKQPKERPAPENLMDH 253 (279)
T ss_pred HhhCChhhCCCHHHHhcC
Confidence 999999999999999986
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=308.86 Aligned_cols=242 Identities=21% Similarity=0.279 Sum_probs=197.4
Q ss_pred cCCCCCCcEEEEEEEcC--C--cEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 69 ESGDKAPNVVYRGRLKN--N--RLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
.+|+|++|+||+|.+.+ + ..||||.+..... ...+.+.+|+.++++++||||+++++++.. ...++|+||++++
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~ 80 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLG 80 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCC
Confidence 46999999999999743 3 3699999987655 345689999999999999999999999988 8899999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-------c
Q 010932 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK-------S 216 (497)
Q Consensus 144 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-------~ 216 (497)
+|.+++.......+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||+++...... .
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 159 (257)
T cd05040 81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR-FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEH 159 (257)
T ss_pred cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC-ccccccCcccEEEecCCEEEeccccccccccccccceecccC
Confidence 9999997643357899999999999999999999999 9999999999999999999999999988654321 2
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
..++..|+|||++.+..++.++|||||||++|+|++ |+.|+........... +. ........+...+..+.+++.
T Consensus 160 ~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~li~ 235 (257)
T cd05040 160 LKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKK-ID---KEGERLERPEACPQDIYNVML 235 (257)
T ss_pred CCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HH---hcCCcCCCCccCCHHHHHHHH
Confidence 345678999999998899999999999999999999 8877643221111110 00 011111223345678999999
Q ss_pred HhcccCCCCCCCHHHHHHHhh
Q 010932 296 KCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~l~ 316 (497)
+||+.+|++|||+.++++.|.
T Consensus 236 ~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 236 QCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHCCCCcccCCCHHHHHHHhc
Confidence 999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-40 Score=316.40 Aligned_cols=253 Identities=16% Similarity=0.229 Sum_probs=197.6
Q ss_pred cccccccCCCCCCcEEEEEEEcC---------------CcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeee
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN---------------NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGC 126 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~---------------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~ 126 (497)
++.+.+.||+|+||.||++...+ ...||||.++..... ..+.|.+|++++++++||||++++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~ 85 (295)
T cd05097 6 QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGV 85 (295)
T ss_pred hCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEE
Confidence 56788899999999999987642 235999999754322 24579999999999999999999999
Q ss_pred eeeCCceEEEEEcCCCCChhhhhhcCC----------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC
Q 010932 127 CAEGDERLLVAQYMPNDTLSKHLFHWD----------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE 196 (497)
Q Consensus 127 ~~~~~~~~lv~e~~~~~~L~~~l~~~~----------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~ 196 (497)
+...+..++||||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.
T Consensus 86 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nill~~ 164 (295)
T cd05097 86 CVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVGN 164 (295)
T ss_pred EcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC-eeccccChhhEEEcC
Confidence 999999999999999999999985421 124789999999999999999999999 999999999999999
Q ss_pred CCCeeEcccCCccccCCCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCC--CCCCchhhHHHhcc
Q 010932 197 DGDPRLSSFGLMKNSRDGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGK--HIPPSHALDVIRGK 268 (497)
Q Consensus 197 ~~~~kl~Dfgla~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~--~~~~~~~~~~~~~~ 268 (497)
++.+||+|||++....... ...++..|+|||++.++.++.++|||||||++|+|+++. .|+...........
T Consensus 165 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~ 244 (295)
T cd05097 165 HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIEN 244 (295)
T ss_pred CCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHH
Confidence 9999999999987543221 223456899999999889999999999999999999854 34432211111110
Q ss_pred c--cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 010932 269 N--LLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 269 ~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~ 316 (497)
. .............++..+..+.+|+.+||+.||++|||+.+|++.|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 245 TGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 0 00000111111223345678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=310.88 Aligned_cols=247 Identities=17% Similarity=0.223 Sum_probs=187.9
Q ss_pred ccCCCCCCcEEEEEEEcC---CcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 68 SESGDKAPNVVYRGRLKN---NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
++||+|+||.||+|...+ ...+++|.+...... ....+.+|+.+++.++||||+++++.+......++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 357999999999997543 457888987654322 2356889999999999999999999999999999999999999
Q ss_pred ChhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC------
Q 010932 144 TLSKHLFHWD---KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG------ 214 (497)
Q Consensus 144 ~L~~~l~~~~---~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------ 214 (497)
+|.+++.... ....++.....++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD-FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITK 159 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC-EecccccHhheEecCCCcEEEeccccccccccchheecc
Confidence 9999986532 233567888999999999999999999 999999999999999999999999998653221
Q ss_pred CccccCCCCCCcccccc-------CCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHH
Q 010932 215 KSYSTNLAYTPPEFLRT-------GRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANED 286 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (497)
....+++.|+|||++.. ..++.++|||||||++|||++ |..|+.........................+...
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05042 160 DCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKY 239 (269)
T ss_pred CCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccC
Confidence 22334677999998753 356889999999999999999 5555543321111111111110011111233446
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 010932 287 ATQLVELASKCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 287 ~~~l~~li~~cl~~dp~~Rps~~~ll~~l~ 316 (497)
+..+.+++..|| .||++|||+++|++.|.
T Consensus 240 ~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 240 SDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 677889999999 59999999999998763
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=312.09 Aligned_cols=244 Identities=17% Similarity=0.240 Sum_probs=195.9
Q ss_pred cccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccC-CCCcceeeeeeeeeC------CceEEE
Q 010932 65 LIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEG------DERLLV 136 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~------~~~~lv 136 (497)
.+++.+|.|+||.||+|... +++.||+|++.... .....+.+|+.++.++ +||||+++++++... ...++|
T Consensus 9 ~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv 87 (272)
T cd06637 9 ELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLV 87 (272)
T ss_pred hHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEE
Confidence 45667799999999999975 48999999987543 3346788999999998 699999999998753 357899
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC---
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD--- 213 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 213 (497)
|||+.+++|.+++.......+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++.....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~ 166 (272)
T cd06637 88 MEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG 166 (272)
T ss_pred EEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHEEECCCCCEEEccCCCceecccccc
Confidence 99999999999997654567999999999999999999999999 99999999999999999999999999875432
Q ss_pred -CCccccCCCCCCccccc-----cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHH
Q 010932 214 -GKSYSTNLAYTPPEFLR-----TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287 (497)
Q Consensus 214 -~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (497)
.....|++.|+|||++. +..++.++|||||||++|||++|..||.......... ...........+...+
T Consensus 167 ~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 242 (272)
T cd06637 167 RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF----LIPRNPAPRLKSKKWS 242 (272)
T ss_pred cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHH----HHhcCCCCCCCCCCcC
Confidence 23456788999999986 3457889999999999999999998874322111110 0011111111223456
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 288 TQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 288 ~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..+.+|+.+||+.||.+|||+.+++.+
T Consensus 243 ~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 243 KKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 679999999999999999999999874
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=318.34 Aligned_cols=253 Identities=20% Similarity=0.327 Sum_probs=202.8
Q ss_pred cccccccCCCCCCcEEEEEEEc--------CCcEEEEEEccCCCC-CChhHHHHHHHHhccC-CCCcceeeeeeeeeCCc
Q 010932 63 SELIVSESGDKAPNVVYRGRLK--------NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDE 132 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 132 (497)
.+.+.+.+|+|+||.||++... ....||+|.++.... .....+.+|+.+++++ +||||+++++++.....
T Consensus 13 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 92 (314)
T cd05099 13 RLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGP 92 (314)
T ss_pred HeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCc
Confidence 3457788899999999999752 245799999875432 2245688999999999 69999999999999889
Q ss_pred eEEEEEcCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC
Q 010932 133 RLLVAQYMPNDTLSKHLFHWD--------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG 198 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~ 198 (497)
.++||||+++++|.+++.... ...+++..+..++.||+.||.|||++| ++|+||||+|||++.++
T Consensus 93 ~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~~ 171 (314)
T cd05099 93 LYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR-CIHRDLAARNVLVTEDN 171 (314)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeeccccceeEEEcCCC
Confidence 999999999999999996532 245899999999999999999999999 99999999999999999
Q ss_pred CeeEcccCCccccCCCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccc
Q 010932 199 DPRLSSFGLMKNSRDGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLL 271 (497)
Q Consensus 199 ~~kl~Dfgla~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~ 271 (497)
.+||+|||+++...... ...++..|+|||++.+..++.++|||||||++|+|++ |..|+..........
T Consensus 172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~---- 247 (314)
T cd05099 172 VMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFK---- 247 (314)
T ss_pred cEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHH----
Confidence 99999999998654321 1123457999999998889999999999999999999 777665432221111
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 272 LLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
.+........+..++..+.+++.+||+.||++|||+.++++.|+.+...
T Consensus 248 -~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 248 -LLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred -HHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 1111111233445667899999999999999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=314.61 Aligned_cols=252 Identities=18% Similarity=0.246 Sum_probs=206.9
Q ss_pred HHhcCCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceE
Q 010932 56 AATNGFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 56 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 134 (497)
........+.+++.+|.|++|+||++... +|+.|+||.+........+.+.+|+.+++.++||||+++++++......+
T Consensus 13 ~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 92 (296)
T cd06655 13 SIGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELF 92 (296)
T ss_pred hcCCCcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEE
Confidence 33334456788889999999999999964 58999999997665555678899999999999999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
+|+||+++++|..++. ...+++..+..++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 93 lv~e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~~-i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~ 168 (296)
T cd06655 93 VVMEYLAGGSLTDVVT---ETCMDEAQIAAVCRECLQALEFLHANQ-VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPE 168 (296)
T ss_pred EEEEecCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccchhcccc
Confidence 9999999999999885 346899999999999999999999999 999999999999999999999999998754332
Q ss_pred ----CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHH
Q 010932 215 ----KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290 (497)
Q Consensus 215 ----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (497)
....+++.|+|||.+.+..++.++|||||||++|+|++|+.||........... .. .........+...+..+
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~ 245 (296)
T cd06655 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-IA--TNGTPELQNPEKLSPIF 245 (296)
T ss_pred cccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HH--hcCCcccCCcccCCHHH
Confidence 234678899999999988899999999999999999999988754322111000 00 00011112234456779
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHH
Q 010932 291 VELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 291 ~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+++.+||..||.+|||+.+++.+
T Consensus 246 ~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 246 RDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred HHHHHHHhhcChhhCCCHHHHhhC
Confidence 999999999999999999999975
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-40 Score=312.18 Aligned_cols=249 Identities=22% Similarity=0.298 Sum_probs=201.1
Q ss_pred cccccccCCCCCCcEEEEEEEcC-C---cEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN-N---RLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~-~---~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
.+++.+.+|+|+||.||+|.+.. + ..||||++..... .....|..|+.+++.++||||+++++++..+...++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 45677888999999999999753 3 3699999875422 22457999999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCc-
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS- 216 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~- 216 (497)
||+++++|.+++... .+.+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++........
T Consensus 85 e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~lH~~g-~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~ 162 (269)
T cd05065 85 EFMENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 162 (269)
T ss_pred ecCCCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccChheEEEcCCCcEEECCCccccccccCccc
Confidence 999999999998653 457899999999999999999999999 99999999999999999999999999875432211
Q ss_pred ------ccc--CCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHH
Q 010932 217 ------YST--NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287 (497)
Q Consensus 217 ------~~g--t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (497)
..+ +..|+|||++.+..++.++|||||||++|||++ |..|+.......... .+........+..++
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~-----~i~~~~~~~~~~~~~ 237 (269)
T cd05065 163 PTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIN-----AIEQDYRLPPPMDCP 237 (269)
T ss_pred cccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHH-----HHHcCCcCCCcccCC
Confidence 111 346999999998899999999999999999886 887765432221111 111111222334566
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHhhhh
Q 010932 288 TQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 288 ~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
..+.+++.+||+.+|.+||++.+|+..|+.+
T Consensus 238 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 238 TALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 7899999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-40 Score=325.62 Aligned_cols=247 Identities=20% Similarity=0.244 Sum_probs=194.3
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC--CCChhHHHHHHHHhccCCCCcceeeeeeeeeC------Cc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS--WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG------DE 132 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~ 132 (497)
..|.+++.||+|+||.||++... .++.||||++.... ......+.+|+.+++.++||||+++++++... ..
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~ 103 (364)
T cd07875 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 103 (364)
T ss_pred cceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCe
Confidence 45678888999999999999975 48899999997542 22345788999999999999999999987543 35
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
.++||||+++ +|...+. ..+++..+..++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++...
T Consensus 104 ~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 177 (364)
T cd07875 104 VYIVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177 (364)
T ss_pred EEEEEeCCCC-CHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence 7999999964 6777763 35889999999999999999999999 9999999999999999999999999998654
Q ss_pred CC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc------------------
Q 010932 213 DG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL------------------ 271 (497)
Q Consensus 213 ~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~------------------ 271 (497)
.. ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||............+.
T Consensus 178 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (364)
T cd07875 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 257 (364)
T ss_pred CCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHH
Confidence 33 345678999999999999999999999999999999999988864321110000000
Q ss_pred ccccc--------------cc----CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 272 LLMDS--------------SL----EGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 272 ~~~~~--------------~~----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..... .. ........+..+.+|+.+||+.||.+|||+.+++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 258 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000 00 000111124578999999999999999999999986
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=308.27 Aligned_cols=247 Identities=18% Similarity=0.313 Sum_probs=202.7
Q ss_pred cccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 142 (497)
.+.+.+.+|+|+||.||++...++..+|+|.+.... ...+.+.+|+.+++.++|+||+++++++.. ...+++|||+++
T Consensus 7 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~ 84 (260)
T cd05073 7 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAK 84 (260)
T ss_pred ceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCC
Confidence 457778899999999999998777889999987543 234679999999999999999999999887 778999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-----cc
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK-----SY 217 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 217 (497)
++|.+++.......+++..+..++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||.+....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 163 (260)
T cd05073 85 GSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGA 163 (260)
T ss_pred CcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCC
Confidence 99999997655667899999999999999999999998 9999999999999999999999999987543321 12
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
.++..|+|||++....++.++|||||||++|+|+| |+.|+........... +........+...+..+.+++.+
T Consensus 164 ~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~ 238 (260)
T cd05073 164 KFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA-----LERGYRMPRPENCPEELYNIMMR 238 (260)
T ss_pred cccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHH-----HhCCCCCCCcccCCHHHHHHHHH
Confidence 33567999999998889999999999999999999 7777654322221111 11111112234456779999999
Q ss_pred hcccCCCCCCCHHHHHHHhhh
Q 010932 297 CLQYEAKDRPDVKFLLSAVAP 317 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~l~~ 317 (497)
||+.+|++||++.++++.|+.
T Consensus 239 ~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 239 CWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HcccCcccCcCHHHHHHHHhc
Confidence 999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=308.22 Aligned_cols=243 Identities=23% Similarity=0.339 Sum_probs=196.9
Q ss_pred ccCCCCCCcEEEEEEEcC----CcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCC
Q 010932 68 SESGDKAPNVVYRGRLKN----NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 142 (497)
++||+|+||.||+|.... +..||+|.+...... ..+.+.+|+.+++.+.||||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 357999999999998532 368999999865442 3467999999999999999999999876 4568999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCc------
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS------ 216 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~------ 216 (497)
++|.+++.. ...+++..+..++.|++.||.|||..+ ++|+||||+|||++.++.+||+|||+++.......
T Consensus 80 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~ 156 (257)
T cd05060 80 GPLLKYLKK--RREIPVSDLKELAHQVAMGMAYLESKH-FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATT 156 (257)
T ss_pred CcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcC-eeccCcccceEEEcCCCcEEeccccccceeecCCccccccc
Confidence 999999975 347899999999999999999999999 99999999999999999999999999885533321
Q ss_pred -cccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHH
Q 010932 217 -YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 217 -~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 294 (497)
..++..|+|||.+.+..++.++|||||||++|+|++ |..|+........ ...+........+..++..+.+++
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~li 231 (257)
T cd05060 157 AGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEV-----IAMLESGERLPRPEECPQEIYSIM 231 (257)
T ss_pred CccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHH-----HHHHHcCCcCCCCCCCCHHHHHHH
Confidence 112357999999998889999999999999999998 7776643321111 111111112234445667899999
Q ss_pred HHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 295 SKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 295 ~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
.+||+.+|++|||+.++++.|+.+.
T Consensus 232 ~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 232 LSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred HHHhcCChhhCcCHHHHHHHHHhcc
Confidence 9999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=313.81 Aligned_cols=255 Identities=22% Similarity=0.331 Sum_probs=204.3
Q ss_pred CcccccccCCCCCCcEEEEEEEc-----CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeee--CCce
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-----NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAE--GDER 133 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~ 133 (497)
..+.+++.+|+|+||.||++.+. ++..||||++...... ..+.|.+|+++++.++||||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 34567788899999999999853 3689999999865443 35689999999999999999999999877 5578
Q ss_pred EEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC
Q 010932 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD 213 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 213 (497)
++||||+++++|.+++... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 84 ~lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRH-RDQINLKRLLLFSSQICKGMDYLGSQR-YIHRDLAARNILVESEDLVKISDFGLAKVLPE 161 (284)
T ss_pred EEEEecCCCCCHHHHHHhC-ccccCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence 9999999999999999653 346999999999999999999999999 99999999999999999999999999986553
Q ss_pred CC-------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHh----------cccccccccc
Q 010932 214 GK-------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIR----------GKNLLLLMDS 276 (497)
Q Consensus 214 ~~-------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~----------~~~~~~~~~~ 276 (497)
.. ...++..|++||.+.+..++.++||||||+++|||+||..|+......... .......+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (284)
T cd05038 162 DKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKE 241 (284)
T ss_pred CCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHc
Confidence 21 122345699999999888999999999999999999999876432211110 0001111111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhh
Q 010932 277 SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 277 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
......+..++..+.+|+.+||+.+|++|||+.+|++.|+.+
T Consensus 242 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 242 GERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred CCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 122222344567899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-40 Score=323.08 Aligned_cols=253 Identities=19% Similarity=0.280 Sum_probs=199.3
Q ss_pred cccccccCCCCCCcEEEEEEE------cCCcEEEEEEccCCCCC-ChhHHHHHHHHhccC-CCCcceeeeeeeeeC-Cce
Q 010932 63 SELIVSESGDKAPNVVYRGRL------KNNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNV-RHKRLVNLIGCCAEG-DER 133 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~-~~~ 133 (497)
.+.+++.||.|+||+||+|.+ .+++.||||+++..... ....+.+|+.+|.++ +||||+++++++... ...
T Consensus 8 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 87 (343)
T cd05103 8 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL 87 (343)
T ss_pred HhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCce
Confidence 567888899999999999974 24789999999754322 245688999999999 689999999988654 467
Q ss_pred EEEEEcCCCCChhhhhhcCC------------------------------------------------------------
Q 010932 134 LLVAQYMPNDTLSKHLFHWD------------------------------------------------------------ 153 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~------------------------------------------------------------ 153 (497)
++||||+++|+|.+++....
T Consensus 88 ~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (343)
T cd05103 88 MVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAE 167 (343)
T ss_pred EEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhh
Confidence 89999999999999886421
Q ss_pred -----CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC------ccccCCC
Q 010932 154 -----KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK------SYSTNLA 222 (497)
Q Consensus 154 -----~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------~~~gt~~ 222 (497)
...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++....... ...+++.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~ 246 (343)
T cd05103 168 QEDLYKKVLTLEDLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 246 (343)
T ss_pred hhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcc
Confidence 124788889999999999999999999 9999999999999999999999999987543221 2234567
Q ss_pred CCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccC
Q 010932 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYE 301 (497)
Q Consensus 223 y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 301 (497)
|+|||.+.+..++.++|||||||++|+|++ |..|++....... ....+........+...++.+.+++.+||+.|
T Consensus 247 y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~ 322 (343)
T cd05103 247 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE 322 (343)
T ss_pred eECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH----HHHHHhccCCCCCCCCCCHHHHHHHHHHccCC
Confidence 999999988889999999999999999997 7766643211110 01111111122223334567999999999999
Q ss_pred CCCCCCHHHHHHHhhhhhc
Q 010932 302 AKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 302 p~~Rps~~~ll~~l~~~~~ 320 (497)
|++|||+.+|+++|+.+.+
T Consensus 323 p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 323 PSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred hhhCcCHHHHHHHHHHHHh
Confidence 9999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-40 Score=292.78 Aligned_cols=249 Identities=18% Similarity=0.248 Sum_probs=200.3
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCC-ChhHHHHHHHHhccCC-CCcceeeeeeeeeCCceEEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e 138 (497)
.+.++++.+|.|+.|.||++++++ |..+|||.+...... ..++++..+.++..-+ +|.||+.+|+|..+...++.||
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence 345677889999999999999875 999999999876543 3467888888876665 8999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---C
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---K 215 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~ 215 (497)
.| +..+..++.. -.+++++..+-++...++.||.||.++.+|+|||+||+|||+|+.|++||||||++-...+. .
T Consensus 172 lM-s~C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAht 249 (391)
T KOG0983|consen 172 LM-STCAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHT 249 (391)
T ss_pred HH-HHHHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccccc
Confidence 88 3445555543 36679999999999999999999998866999999999999999999999999998765443 4
Q ss_pred ccccCCCCCCcccccc---CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRT---GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
...|.+.|||||.+.- .+|+.++||||||++|+||.||..|+.....+...-..+..-..+.+. .....++.+.+
T Consensus 250 rsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~--~~~gFSp~F~~ 327 (391)
T KOG0983|consen 250 RSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLP--GHMGFSPDFQS 327 (391)
T ss_pred cccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCC--cccCcCHHHHH
Confidence 5678899999999863 468999999999999999999999998754333211111111111111 12237889999
Q ss_pred HHHHhcccCCCCCCCHHHHHHH
Q 010932 293 LASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~ 314 (497)
|+..||++|+.+||...++|++
T Consensus 328 fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 328 FVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred HHHHHhhcCcccCcchHHHhcC
Confidence 9999999999999999999986
|
|
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=307.62 Aligned_cols=245 Identities=22% Similarity=0.348 Sum_probs=201.0
Q ss_pred CcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
..+.+.+.+|+|+||.||++.. +++.||+|.++... ..+.+.+|+.+++.++||||+++++++... ..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 4567778899999999999975 57889999986532 346799999999999999999999998664 5799999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-CccccC
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-KSYSTN 220 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~gt 220 (497)
+++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... .....+
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 160 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK-LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLP 160 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCC
Confidence 999999997655567899999999999999999999998 999999999999999999999999998754432 223345
Q ss_pred CCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcc
Q 010932 221 LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299 (497)
Q Consensus 221 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 299 (497)
..|+|||.+.++.++.++|||||||++|+|++ |+.|+......... ...........+...+..+.+++.+||+
T Consensus 161 ~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~~l~ 235 (254)
T cd05083 161 VKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVK-----ECVEKGYRMEPPEGCPADVYVLMTSCWE 235 (254)
T ss_pred ceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHH-----HHHhCCCCCCCCCcCCHHHHHHHHHHcC
Confidence 67999999998899999999999999999998 77776544322211 1111122222334566789999999999
Q ss_pred cCCCCCCCHHHHHHHhh
Q 010932 300 YEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 300 ~dp~~Rps~~~ll~~l~ 316 (497)
.+|+.|||+.+++..|+
T Consensus 236 ~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 236 TEPKKRPSFHKLREKLE 252 (254)
T ss_pred CChhhCcCHHHHHHHHc
Confidence 99999999999999875
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=306.27 Aligned_cols=241 Identities=25% Similarity=0.384 Sum_probs=198.6
Q ss_pred cCCCCCCcEEEEEEEcCCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCChhh
Q 010932 69 ESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSK 147 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 147 (497)
.+|.|+||.||++...+++.||+|++...... ....+.+|+++++++.||||+++++++......++||||+++++|.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~ 81 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLT 81 (251)
T ss_pred ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHH
Confidence 57999999999999877999999998765433 34679999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC------ccccCC
Q 010932 148 HLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK------SYSTNL 221 (497)
Q Consensus 148 ~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------~~~gt~ 221 (497)
++... ...+++..+..++.+++.||.|||+++ ++||||||+|||++.++.++|+|||++....... ....+.
T Consensus 82 ~l~~~-~~~~~~~~~~~~~~~~~~~l~~lH~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T cd05041 82 FLRKK-KNRLTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPI 159 (251)
T ss_pred HHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCccee
Confidence 98652 446899999999999999999999999 9999999999999999999999999987554221 112245
Q ss_pred CCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhccc
Q 010932 222 AYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQY 300 (497)
Q Consensus 222 ~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 300 (497)
.|+|||.+.++.++.++|||||||++|+|+| |..|+.......... .+........+...+..+.+++.+||+.
T Consensus 160 ~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~~l~~ 234 (251)
T cd05041 160 KWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRE-----RIESGYRMPAPQLCPEEIYRLMLQCWAY 234 (251)
T ss_pred ccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHH-----HHhcCCCCCCCccCCHHHHHHHHHHhcc
Confidence 6999999998889999999999999999999 666664432221111 1111112223445677899999999999
Q ss_pred CCCCCCCHHHHHHHhh
Q 010932 301 EAKDRPDVKFLLSAVA 316 (497)
Q Consensus 301 dp~~Rps~~~ll~~l~ 316 (497)
+|.+|||+.++++.|+
T Consensus 235 ~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 235 DPENRPSFSEIYNELQ 250 (251)
T ss_pred ChhhCcCHHHHHHHhh
Confidence 9999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=308.82 Aligned_cols=244 Identities=20% Similarity=0.278 Sum_probs=192.2
Q ss_pred cCCCCCCcEEEEEEEcC----CcEEEEEEccCCC-CCChhHHHHHHHHhccCCCCcceeeeeeeee-CCceEEEEEcCCC
Q 010932 69 ESGDKAPNVVYRGRLKN----NRLVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE-GDERLLVAQYMPN 142 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~ 142 (497)
.||+|+||.||+|.+.+ +..||||.+.... ....+.+.+|+.+++.++||||+++++++.. ++..++|+||+.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 81 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH 81 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence 46999999999998632 4579999986432 2234678899999999999999999998754 4567899999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--------
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-------- 214 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-------- 214 (497)
++|.+++... ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 159 (262)
T cd05058 82 GDLRNFIRSE-THNPTVKDLIGFGLQVAKGMEYLASKK-FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH 159 (262)
T ss_pred CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCccccccccCCcceeeccc
Confidence 9999998652 345678888999999999999999998 999999999999999999999999998754321
Q ss_pred CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCc-hhhHHHhccccccccccccCCCCCHHHHHHHHHH
Q 010932 215 KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPS-HALDVIRGKNLLLLMDSSLEGQYANEDATQLVEL 293 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 293 (497)
....++..|+|||.+.+..++.++|||||||++|||++|..|+.. ...... ...+........+...+..+.++
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l 234 (262)
T cd05058 160 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDI-----TVYLLQGRRLLQPEYCPDPLYEV 234 (262)
T ss_pred ccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHhcCCCCCCCCcCCHHHHHH
Confidence 122346689999999888899999999999999999997655432 211111 11111111112233456779999
Q ss_pred HHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 294 ASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 294 i~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
+.+||+.+|++||++.+++..|+.+.
T Consensus 235 i~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 235 MLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred HHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 99999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=320.27 Aligned_cols=246 Identities=20% Similarity=0.231 Sum_probs=197.4
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC---CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
++.+++.||+|+||+||+++.. +++.||+|++.... ......+.+|+.++..++|+||+.+++++.+.+..++|||
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E 81 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD 81 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 4677888999999999999976 48899999986422 1223458889999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC---
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--- 215 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 215 (497)
|++||+|.+++... ...+++..+..++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++......
T Consensus 82 y~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~~-iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 159 (331)
T cd05624 82 YYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQLH-YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQ 159 (331)
T ss_pred CCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCchHHEEEcCCCCEEEEeccceeeccCCCcee
Confidence 99999999999652 457899999999999999999999999 9999999999999999999999999987544321
Q ss_pred --ccccCCCCCCcccccc-----CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCC---CHH
Q 010932 216 --SYSTNLAYTPPEFLRT-----GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY---ANE 285 (497)
Q Consensus 216 --~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 285 (497)
...||+.|+|||++.+ +.++.++|||||||++|+|++|+.||........... +........+ ...
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~----i~~~~~~~~~p~~~~~ 235 (331)
T cd05624 160 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK----IMNHEERFQFPSHITD 235 (331)
T ss_pred eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHH----HHcCCCcccCCCcccc
Confidence 2468999999999875 4678899999999999999999998865432221111 1111111111 123
Q ss_pred HHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 010932 286 DATQLVELASKCLQYEAKD--RPDVKFLLSA 314 (497)
Q Consensus 286 ~~~~l~~li~~cl~~dp~~--Rps~~~ll~~ 314 (497)
.++.+.+++.+||..++++ |+++++++++
T Consensus 236 ~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 236 VSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 5678999999999876554 4688888876
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-40 Score=322.60 Aligned_cols=236 Identities=19% Similarity=0.234 Sum_probs=189.1
Q ss_pred CCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC---ChhHHHHHHHHhccC---CCCcceeeeeeeeeCCceEEEEEcCCC
Q 010932 70 SGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP---DPHQFVTEAAGLGNV---RHKRLVNLIGCCAEGDERLLVAQYMPN 142 (497)
Q Consensus 70 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~lv~e~~~~ 142 (497)
||+|+||+||+|... +|+.||||++...... ....+..|..++... .||||+.+++++......++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 599999999999976 4899999998643221 223455677776655 699999999999999999999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC----CCccc
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----GKSYS 218 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~ 218 (497)
++|..++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.++|+|||+++.... .....
T Consensus 81 g~L~~~l~~--~~~~~~~~~~~~~~qil~al~~LH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 157 (330)
T cd05586 81 GELFWHLQK--EGRFSEDRAKFYIAELVLALEHLHKYD-IVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFC 157 (330)
T ss_pred ChHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence 999998865 567999999999999999999999999 99999999999999999999999999875322 23456
Q ss_pred cCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCC-HHHHHHHHHHHHH
Q 010932 219 TNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA-NEDATQLVELASK 296 (497)
Q Consensus 219 gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~ 296 (497)
||+.|+|||++.+. .++.++|||||||++|+|++|..||........... +..... .++ ...+..+.+++.+
T Consensus 158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~----i~~~~~--~~~~~~~~~~~~~li~~ 231 (330)
T cd05586 158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRN----IAFGKV--RFPKNVLSDEGRQFVKG 231 (330)
T ss_pred CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHH----HHcCCC--CCCCccCCHHHHHHHHH
Confidence 89999999999764 479999999999999999999998865433222111 000000 111 2246778999999
Q ss_pred hcccCCCCCC----CHHHHHHH
Q 010932 297 CLQYEAKDRP----DVKFLLSA 314 (497)
Q Consensus 297 cl~~dp~~Rp----s~~~ll~~ 314 (497)
||+.||.+|| ++.+++++
T Consensus 232 ~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 232 LLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred HcCCCHHHCCCCCCCHHHHhcC
Confidence 9999999998 57777765
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=325.32 Aligned_cols=243 Identities=19% Similarity=0.209 Sum_probs=195.1
Q ss_pred cccccccCCCCCCcEEEEEEEc---CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 63 SELIVSESGDKAPNVVYRGRLK---NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
.+.+++.||.|+||.||++... .+..||+|.+... ..+.+|+++|+.++||||+++++++......++|||+
T Consensus 93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~ 167 (392)
T PHA03207 93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPK 167 (392)
T ss_pred ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehh
Confidence 4788899999999999999854 2678999998643 2367899999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-----
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----- 214 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 214 (497)
+. ++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.++|+|||+++.....
T Consensus 168 ~~-~~l~~~l~~--~~~l~~~~~~~i~~ql~~aL~~LH~~g-ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~ 243 (392)
T PHA03207 168 YK-CDLFTYVDR--SGPLPLEQAITIQRRLLEALAYLHGRG-IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQ 243 (392)
T ss_pred cC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEccCccccccCccccccc
Confidence 85 678888843 568999999999999999999999999 999999999999999999999999998754332
Q ss_pred -CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHH--------Hhcc---cc--cc--------
Q 010932 215 -KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDV--------IRGK---NL--LL-------- 272 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~--------~~~~---~~--~~-------- 272 (497)
....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .... .. ..
T Consensus 244 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~ 323 (392)
T PHA03207 244 CYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCK 323 (392)
T ss_pred ccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHH
Confidence 23568999999999998899999999999999999999999886532110 0000 00 00
Q ss_pred ---ccccccCCCC--C-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 273 ---LMDSSLEGQY--A-----NEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 273 ---~~~~~~~~~~--~-----~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
......+..+ + ...+.++.++|.+||+.||++|||+.+++.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 324 HFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000000 1 1234578899999999999999999999987
|
|
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=310.80 Aligned_cols=243 Identities=19% Similarity=0.263 Sum_probs=202.0
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC-CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
++.+++.+|.|++|.||+|... +++.||+|++.... ......+.+|+++++.++|+||+++++++..+...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 3567788899999999999976 48999999987543 233457899999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----Cc
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KS 216 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 216 (497)
++++|.+++.. ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||+++..... ..
T Consensus 82 ~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (274)
T cd06609 82 GGGSCLDLLKP---GKLDETYIAFILREVLLGLEYLHEEG-KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT 157 (274)
T ss_pred CCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEcccccceeeccccccccc
Confidence 99999999864 38899999999999999999999999 999999999999999999999999998765433 24
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHH-HHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANE-DATQLVELAS 295 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~ 295 (497)
..+++.|+|||++.+..++.++|||||||++|+|+||..|+........ ...+........+.. .+..+.+++.
T Consensus 158 ~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~ 232 (274)
T cd06609 158 FVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV-----LFLIPKNNPPSLEGNKFSKPFKDFVS 232 (274)
T ss_pred ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH-----HHHhhhcCCCCCcccccCHHHHHHHH
Confidence 5678889999999988899999999999999999999988743321111 111111111222222 5677999999
Q ss_pred HhcccCCCCCCCHHHHHHH
Q 010932 296 KCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~ 314 (497)
+||..+|++|||+++++++
T Consensus 233 ~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 233 LCLNKDPKERPSAKELLKH 251 (274)
T ss_pred HHhhCChhhCcCHHHHhhC
Confidence 9999999999999999985
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-39 Score=306.72 Aligned_cols=249 Identities=20% Similarity=0.193 Sum_probs=203.7
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
.+.+.+.+|.|+||.||++... +++.+++|++........+.+.+|+++++.++||||+++++++......+++|||++
T Consensus 4 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~ 83 (262)
T cd06613 4 DYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCG 83 (262)
T ss_pred ceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCC
Confidence 4567788899999999999975 488999999987655566789999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----Ccc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KSY 217 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 217 (497)
+++|.+++... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ...
T Consensus 84 ~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~ 161 (262)
T cd06613 84 GGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHETG-KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSF 161 (262)
T ss_pred CCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCChhhEEECCCCCEEECccccchhhhhhhhccccc
Confidence 99999988652 367999999999999999999999999 999999999999999999999999998754432 234
Q ss_pred ccCCCCCCccccccC---CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHH
Q 010932 218 STNLAYTPPEFLRTG---RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~---~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 294 (497)
.++..|+|||.+.+. .++.++|||||||++|+|+||+.|+................... .....+...+..+.+++
T Consensus 162 ~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li 240 (262)
T cd06613 162 IGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPP-PKLKDKEKWSPVFHDFI 240 (262)
T ss_pred cCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC-ccccchhhhhHHHHHHH
Confidence 677889999999876 78999999999999999999998875432111110000000010 01112344677899999
Q ss_pred HHhcccCCCCCCCHHHHHHH
Q 010932 295 SKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 295 ~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+||+.+|..|||+.+++.+
T Consensus 241 ~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 241 KKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred HHHcCCChhhCCCHHHHhcC
Confidence 99999999999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=313.09 Aligned_cols=252 Identities=16% Similarity=0.246 Sum_probs=197.2
Q ss_pred cccccccCCCCCCcEEEEEEEc-----------------CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeee
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-----------------NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLI 124 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-----------------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~ 124 (497)
.+.+.+.||+|+||.||++... ++..||+|++...... ....+.+|+.+|+.++|+||++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~ 85 (296)
T cd05095 6 RLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLL 85 (296)
T ss_pred hceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEE
Confidence 3567788999999999998642 2447999999754322 246799999999999999999999
Q ss_pred eeeeeCCceEEEEEcCCCCChhhhhhcCC---------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC
Q 010932 125 GCCAEGDERLLVAQYMPNDTLSKHLFHWD---------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD 195 (497)
Q Consensus 125 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~ 195 (497)
+++...+..++||||+++++|.+++.... ...+++..+..++.||+.||.|||+.+ ++|+||||+|||++
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dlkp~Nili~ 164 (296)
T cd05095 86 AVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN-FVHRDLATRNCLVG 164 (296)
T ss_pred EEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-eecccCChheEEEc
Confidence 99999999999999999999999986532 124778899999999999999999999 99999999999999
Q ss_pred CCCCeeEcccCCccccCCCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh--CCCCCCchhhHHHhc
Q 010932 196 EDGDPRLSSFGLMKNSRDGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS--GKHIPPSHALDVIRG 267 (497)
Q Consensus 196 ~~~~~kl~Dfgla~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt--g~~~~~~~~~~~~~~ 267 (497)
.++.++|+|||+++...... ...+++.|++||...++.++.++|||||||++|||++ |..|+..........
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~ 244 (296)
T cd05095 165 KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIE 244 (296)
T ss_pred CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHH
Confidence 99999999999987543321 2233568999999888899999999999999999998 445553321111110
Q ss_pred ccccccc---ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 010932 268 KNLLLLM---DSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 268 ~~~~~~~---~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~ 316 (497)
. ..... ........+..++..+.+|+.+||+.||++|||+.+|++.|+
T Consensus 245 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 245 N-TGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred H-HHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 0 00000 001111223446678999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=311.30 Aligned_cols=253 Identities=17% Similarity=0.213 Sum_probs=202.4
Q ss_pred HHHHhcCCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCc
Q 010932 54 LRAATNGFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132 (497)
Q Consensus 54 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 132 (497)
+..++++++...++ |+|+||.||+|.+. ++..|++|.+........+.+.+|+.+++.++|+||+++++++..++.
T Consensus 3 ~~~~~~~~~~~~~l---g~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (268)
T cd06624 3 YEYEYDENGERVVL---GKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGF 79 (268)
T ss_pred cccccccCCceEEE---ecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCE
Confidence 34566777665554 99999999999965 478999999876654456689999999999999999999999999999
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCC--CHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC-CCCeeEcccCCcc
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPL--PWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE-DGDPRLSSFGLMK 209 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l--~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~ 209 (497)
.++|+||+++++|.+++... ...+ ++..+..++.||+.||.|||+.+ ++|+||||+||+++. ++.++|+|||++.
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~h~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 80 FKIFMEQVPGGSLSALLRSK-WGPLKDNEQTIIFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred EEEEEecCCCCCHHHHHHHh-cccCCCcHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence 99999999999999998652 2344 88889999999999999999999 999999999999986 6799999999987
Q ss_pred ccCCC----CccccCCCCCCccccccCC--CCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCC
Q 010932 210 NSRDG----KSYSTNLAYTPPEFLRTGR--VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA 283 (497)
Q Consensus 210 ~~~~~----~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (497)
..... ....+++.|+|||++.+.. ++.++||||||+++|+|++|+.|+........... ..........++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~ 234 (268)
T cd06624 158 RLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMF---KVGMFKIHPEIP 234 (268)
T ss_pred ecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHh---hhhhhccCCCCC
Confidence 54321 2345788999999987643 78899999999999999999988753221110000 000011122345
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 284 NEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 284 ~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
...+..+.+++.+||+.+|.+|||+.+++.+
T Consensus 235 ~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 235 ESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred cccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 5567789999999999999999999999875
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=313.29 Aligned_cols=253 Identities=16% Similarity=0.248 Sum_probs=204.8
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
+++++++.||+|+||+||++... +|+.||+|++..... ...+.+.+|+++++.++||||+++++++......++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 45678889999999999999975 489999999865432 2356799999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCcccccCCCcceEeCCCCCeeEcccCCccccCC--CCc
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQ-NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD--GKS 216 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--~~~ 216 (497)
+++++|.+++.. .+.+++..+..++.+++.||.|||+. + ++|+||||+||+++.++.++|+|||++..... ...
T Consensus 85 ~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~ 161 (284)
T cd06620 85 MDCGSLDRIYKK--GGPIPVEILGKIAVAVVEGLTYLYNVHR-IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADT 161 (284)
T ss_pred CCCCCHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHhcC-eeccCCCHHHEEECCCCcEEEccCCcccchhhhccCc
Confidence 999999998865 45789999999999999999999974 6 99999999999999999999999999865422 234
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHH---hc----cccccccccccCCCCC-HHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVI---RG----KNLLLLMDSSLEGQYA-NEDAT 288 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~-~~~~~ 288 (497)
..++..|+|||++.+..++.++|||||||++|+|+||+.||........ .. .......... ....+ ...+.
T Consensus 162 ~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 240 (284)
T cd06620 162 FVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-PPRLPSSDFPE 240 (284)
T ss_pred cccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc-CCCCCchhcCH
Confidence 5678999999999888899999999999999999999998764322100 00 0011111111 11122 22567
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHhhhh
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
.+.+|+.+||+.||++|||+.+++++..-+
T Consensus 241 ~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~ 270 (284)
T cd06620 241 DLRDFVDACLLKDPTERPTPQQLCAMPPFI 270 (284)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 899999999999999999999999875443
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-41 Score=315.44 Aligned_cols=245 Identities=19% Similarity=0.251 Sum_probs=206.7
Q ss_pred cCCCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCC---ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceE
Q 010932 59 NGFSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWP---DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 59 ~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 134 (497)
+.|+.++++ |+|+||.|+-+..+. |+.+|.|.+.+.... .....++|-++|.+++.+.||.+--.|.+++.+|
T Consensus 185 n~F~~~Rvl---GkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LC 261 (591)
T KOG0986|consen 185 NTFRVYRVL---GKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALC 261 (591)
T ss_pred cceeeeEEE---ecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceE
Confidence 346665555 999999999999765 999999998654322 2346789999999999999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
+|+..|+||+|.-+|.+...+.+++..++.++.+|+.||.+||+.+ ||.|||||+|||+|+.|+++|+|+|+|.....+
T Consensus 262 lVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~-iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 262 LVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR-IVYRDLKPENILLDDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc-eeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence 9999999999999999888889999999999999999999999999 999999999999999999999999999987665
Q ss_pred C---ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHH
Q 010932 215 K---SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291 (497)
Q Consensus 215 ~---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (497)
. ..+||.+|||||++.++.|+...|+|||||+||||+.|+.||-......-.. .+...+ ......++...++++.
T Consensus 341 ~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~e-Evdrr~-~~~~~ey~~kFS~eak 418 (591)
T KOG0986|consen 341 KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKRE-EVDRRT-LEDPEEYSDKFSEEAK 418 (591)
T ss_pred CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHH-HHHHHH-hcchhhcccccCHHHH
Confidence 4 3478999999999999999999999999999999999999986543222111 111000 1112356778899999
Q ss_pred HHHHHhcccCCCCCCCHH
Q 010932 292 ELASKCLQYEAKDRPDVK 309 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps~~ 309 (497)
+|....|++||++|....
T Consensus 419 slc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 419 SLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred HHHHHHHccCHHHhccCC
Confidence 999999999999997553
|
|
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=313.58 Aligned_cols=249 Identities=22% Similarity=0.315 Sum_probs=200.3
Q ss_pred cccccccCCCCCCcEEEEEEEc------CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK------NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
++.+++.+|.|+||.||++... ++..||+|++...... ....+.+|+.++++++||||+++++++..+...++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~l 85 (288)
T cd05050 6 NIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCL 85 (288)
T ss_pred hceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEE
Confidence 4567788899999999999863 3678999998754322 24568999999999999999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC
Q 010932 136 VAQYMPNDTLSKHLFHWD--------------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD 195 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~--------------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~ 195 (497)
||||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~-i~H~dl~p~nil~~ 164 (288)
T cd05050 86 LFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK-FVHRDLATRNCLVG 164 (288)
T ss_pred EEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-eecccccHhheEec
Confidence 999999999999986421 135788999999999999999999999 99999999999999
Q ss_pred CCCCeeEcccCCccccCCCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhcc
Q 010932 196 EDGDPRLSSFGLMKNSRDGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGK 268 (497)
Q Consensus 196 ~~~~~kl~Dfgla~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~ 268 (497)
.++.++|+|||++....... ....++.|+|||.+.+..++.++|||||||++|+|++ |..||..........
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~- 243 (288)
T cd05050 165 ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIY- 243 (288)
T ss_pred CCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-
Confidence 99999999999987543221 2233567999999998899999999999999999998 766664332221111
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhh
Q 010932 269 NLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAP 317 (497)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~ 317 (497)
.+........+...+..+.+|+.+||+.+|.+|||+.++++.|++
T Consensus 244 ----~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 244 ----YVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred ----HHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 111111112334466789999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=306.45 Aligned_cols=247 Identities=23% Similarity=0.351 Sum_probs=201.4
Q ss_pred CcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
+++.+.+.+|.|+||.||++.+.++..+|+|.+..... ....|.+|++++++++||||+++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 45667788999999999999987788999999875432 34679999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-----c
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK-----S 216 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 216 (497)
+++|.+++... ...+++..+..++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||++....... .
T Consensus 83 ~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05112 83 HGCLSDYLRAQ-RGKFSQETLLGMCLDVCEGMAYLESSN-VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTG 160 (256)
T ss_pred CCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccccceEEEcCCCeEEECCCcceeecccCcccccCC
Confidence 99999998642 456899999999999999999999999 9999999999999999999999999987543221 2
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
..++..|+|||.+.++.++.++|||||||++|||++ |..|+........... +........+...+..+.+|+.
T Consensus 161 ~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~ 235 (256)
T cd05112 161 TKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVET-----INAGFRLYKPRLASQSVYELMQ 235 (256)
T ss_pred CccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHH-----HhCCCCCCCCCCCCHHHHHHHH
Confidence 234568999999998889999999999999999998 7777643322211111 1111111122334677999999
Q ss_pred HhcccCCCCCCCHHHHHHHhh
Q 010932 296 KCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~l~ 316 (497)
+||+.+|++|||+.++++.|.
T Consensus 236 ~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 236 HCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred HHcccChhhCCCHHHHHHhhC
Confidence 999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=307.85 Aligned_cols=237 Identities=21% Similarity=0.346 Sum_probs=190.8
Q ss_pred cCCCCCCcEEEEEEEcC-C----------cEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 69 ESGDKAPNVVYRGRLKN-N----------RLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
.||+|+||.||+|.+.+ + ..|++|++...... ...+.+|+.+++.++||||+++++++.. ...++||
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 57999999999999864 3 25888887655433 6789999999999999999999999988 7789999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC-------CeeEcccCCccc
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG-------DPRLSSFGLMKN 210 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~-------~~kl~Dfgla~~ 210 (497)
||+++++|.+++... ...+++..+..++.||+.||.|||+++ ++|+||||+|||++.++ .+||+|||++..
T Consensus 80 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~ 157 (259)
T cd05037 80 EYVKFGPLDVFLHRE-KNNVSLHWKLDVAKQLASALHYLEDKK-LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT 157 (259)
T ss_pred EcCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhhCC-eecccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence 999999999998653 337899999999999999999999999 99999999999999887 799999999987
Q ss_pred cCCCCccccCCCCCCccccccC--CCCcccceeehhhhHHHHhhCCC-CCCchhhHHHhccccccccccccCCCCCHHHH
Q 010932 211 SRDGKSYSTNLAYTPPEFLRTG--RVIPESVIYSYGTVLLDLLSGKH-IPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287 (497)
Q Consensus 211 ~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slG~~l~elltg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (497)
........++..|+|||++.+. .++.++|||||||++|+|++|.. |+........ ...... ....+....
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~-----~~~~~~--~~~~~~~~~ 230 (259)
T cd05037 158 VLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK-----ERFYQD--QHRLPMPDC 230 (259)
T ss_pred cccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH-----HHHHhc--CCCCCCCCc
Confidence 6555555677889999999876 78999999999999999999643 3322211100 000000 111111123
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 010932 288 TQLVELASKCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 288 ~~l~~li~~cl~~dp~~Rps~~~ll~~l~ 316 (497)
..+.+++.+||..+|.+|||+.++++.|.
T Consensus 231 ~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 231 AELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred hHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 67999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=306.77 Aligned_cols=245 Identities=17% Similarity=0.193 Sum_probs=201.9
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeC-CceEEEEEc
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG-DERLLVAQY 139 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~ 139 (497)
|.+++.+|.|++|.||++..+ +++.||+|.+..... ...+.+.+|++++++++|+||+++++.+... ...++||||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF 81 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence 567888999999999999975 478999999865432 2345688999999999999999999987644 457899999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----C
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----K 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 215 (497)
+++++|.+++.......+++..+..++.+++.||.+||+.+ ++|+||||+||+++.++.++|+|||++...... .
T Consensus 82 ~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~-i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (257)
T cd08223 82 CEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH-ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS 160 (257)
T ss_pred cCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCchhEEEecCCcEEEecccceEEecccCCccc
Confidence 99999999997654567999999999999999999999999 999999999999999999999999998754332 2
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
...+++.|+|||++.+..++.++|||||||++++|++|+.||............ . .......+...+..+.+++.
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~li~ 235 (257)
T cd08223 161 TLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRI----I-EGKLPPMPKDYSPELGELIA 235 (257)
T ss_pred cccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHH----H-hcCCCCCccccCHHHHHHHH
Confidence 345788999999999888999999999999999999999887654322221111 1 11112334456778999999
Q ss_pred HhcccCCCCCCCHHHHHHH
Q 010932 296 KCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~ 314 (497)
+||+.||++|||+.+++++
T Consensus 236 ~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 236 TMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred HHhccCcccCCCHHHHhcC
Confidence 9999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=313.02 Aligned_cols=251 Identities=20% Similarity=0.309 Sum_probs=199.4
Q ss_pred cccccccCCCCCCcEEEEEEEcC------CcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
.+.+++.||+|+||.||+|..++ +..||+|.+...... ....+.+|+.+++.++||||+++++++......++
T Consensus 7 ~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 86 (288)
T cd05061 7 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLV 86 (288)
T ss_pred HceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEE
Confidence 45778889999999999997532 458999998654321 23468899999999999999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCC
Q 010932 136 VAQYMPNDTLSKHLFHWD--------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGL 207 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~--------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 207 (497)
||||+++|+|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.++|+|||+
T Consensus 87 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dikp~nili~~~~~~~L~Dfg~ 165 (288)
T cd05061 87 VMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFGM 165 (288)
T ss_pred EEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCCChheEEEcCCCcEEECcCCc
Confidence 999999999999996421 234577888999999999999999999 99999999999999999999999999
Q ss_pred ccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCC
Q 010932 208 MKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEG 280 (497)
Q Consensus 208 a~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (497)
++..... ....++..|+|||.+.++.++.++|||||||++|||++ |..|+.......... .+.+. ...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~----~~~~~-~~~ 240 (288)
T cd05061 166 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK----FVMDG-GYL 240 (288)
T ss_pred cccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH----HHHcC-CCC
Confidence 8754322 12234567999999998899999999999999999999 565554322221111 01111 111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 281 QYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 281 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
..+...+..+.+++.+||+.||++|||+.++++.|+...
T Consensus 241 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 241 DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 223345678999999999999999999999999887753
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=307.13 Aligned_cols=242 Identities=18% Similarity=0.309 Sum_probs=199.4
Q ss_pred cccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC---------hhHHHHHHHHhccCCCCcceeeeeeeeeCCceE
Q 010932 65 LIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD---------PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 134 (497)
.+.+.+|.|++|.||+|... +++.||+|.+....... .+.+.+|+.++++++||||+++++++......+
T Consensus 3 ~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (267)
T cd06628 3 IKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLN 82 (267)
T ss_pred cccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccE
Confidence 44566799999999999975 48899999987543322 146889999999999999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
+|+||+++++|.+++.. .+.+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.++.....
T Consensus 83 lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lH~~~-ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06628 83 IFLEYVPGGSVAALLNN--YGAFEETLVRNFVRQILKGLNYLHNRG-IIHRDIKGANILVDNKGGIKISDFGISKKLEAN 159 (267)
T ss_pred EEEEecCCCCHHHHHHh--ccCccHHHHHHHHHHHHHHHHHHHhcC-cccccCCHHHEEEcCCCCEEecccCCCcccccc
Confidence 99999999999999965 467899999999999999999999999 999999999999999999999999998755421
Q ss_pred ----------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCH
Q 010932 215 ----------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYAN 284 (497)
Q Consensus 215 ----------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (497)
....++..|+|||.+.+..++.++|||||||++|+|++|+.||........ +.... .......+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~----~~~~~-~~~~~~~~~ 234 (267)
T cd06628 160 SLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA----IFKIG-ENASPEIPS 234 (267)
T ss_pred cccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH----HHHHh-ccCCCcCCc
Confidence 123567889999999988899999999999999999999998754321110 00111 112223445
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 285 EDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 285 ~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..+..+.+++.+||+.||.+||++.+++++
T Consensus 235 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 235 NISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred ccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 567889999999999999999999999874
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=308.57 Aligned_cols=245 Identities=20% Similarity=0.272 Sum_probs=195.7
Q ss_pred cCCCCCCcEEEEEEEcC-Cc--EEEEEEccCCCC-CChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 69 ESGDKAPNVVYRGRLKN-NR--LVAIKRFSRQSW-PDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~~-~~--~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
.+|+|+||.||+|.+++ |. .+++|.++.... ...+.+.+|++++.++ +||||+++++++...+..++||||++++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 46999999999999754 43 578898875332 2345788999999999 7999999999999999999999999999
Q ss_pred ChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 144 TLSKHLFHWD--------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 144 ~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
+|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.+||+|||++.
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nili~~~~~~kl~dfgl~~ 160 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFGLSR 160 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccccceEEEcCCCeEEECCCCCcc
Confidence 9999986421 235889999999999999999999998 9999999999999999999999999986
Q ss_pred ccCCC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHH
Q 010932 210 NSRDG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANE 285 (497)
Q Consensus 210 ~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (497)
..... .....+..|+|||++....++.++|||||||++|||++ |..||......... ..+........+..
T Consensus 161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~-----~~~~~~~~~~~~~~ 235 (270)
T cd05047 161 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY-----EKLPQGYRLEKPLN 235 (270)
T ss_pred ccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHH-----HHHhCCCCCCCCCc
Confidence 33211 11223567999999988889999999999999999997 88776443221111 11111112223344
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 286 DATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 286 ~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
.+..+.+++.+||+.||.+|||+.+++..|..+.
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 236 CDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 5677999999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=319.16 Aligned_cols=246 Identities=20% Similarity=0.236 Sum_probs=197.2
Q ss_pred cccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCC---CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
++.+++.||+|+||+||++..+. ++.||+|++.... ......+.+|+.++..++|+||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD 81 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence 45778889999999999999765 8899999986421 1223458889999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---- 214 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 214 (497)
|+++|+|.+++... ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 82 y~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~-iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~ 159 (332)
T cd05623 82 YYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 159 (332)
T ss_pred ccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEeecchheecccCCcce
Confidence 99999999999652 457899999999999999999999999 999999999999999999999999998754322
Q ss_pred -CccccCCCCCCccccc-----cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccC---CCCCHH
Q 010932 215 -KSYSTNLAYTPPEFLR-----TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLE---GQYANE 285 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 285 (497)
....||+.|+|||++. ...++.++|||||||++|||++|+.||........... +...... ......
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~----i~~~~~~~~~p~~~~~ 235 (332)
T cd05623 160 SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK----IMNHKERFQFPAQVTD 235 (332)
T ss_pred ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHH----HhCCCccccCCCcccc
Confidence 2346899999999986 34678999999999999999999998865432221111 1111111 111234
Q ss_pred HHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 010932 286 DATQLVELASKCLQYEAKD--RPDVKFLLSA 314 (497)
Q Consensus 286 ~~~~l~~li~~cl~~dp~~--Rps~~~ll~~ 314 (497)
.+..+.+|+.+|+..++.+ |+++.+++++
T Consensus 236 ~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 236 VSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 5778999999999765554 6899999987
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-40 Score=317.65 Aligned_cols=245 Identities=23% Similarity=0.371 Sum_probs=213.6
Q ss_pred ccCCCCCCcEEEEEEEcC---C--cEEEEEEccCC-CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 68 SESGDKAPNVVYRGRLKN---N--RLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~~---~--~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
+.||.|-||.||+|...+ | -.||||.-+.. ...+.+.|+.|..+|+.++|||||+++|+|.+ ...|||||.++
T Consensus 395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmEL~~ 473 (974)
T KOG4257|consen 395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVMELAP 473 (974)
T ss_pred HhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEeccc
Confidence 467999999999999532 3 37999998874 44457889999999999999999999999986 56899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCccc---
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYS--- 218 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~--- 218 (497)
-|.|..+|.. ....++......++.||+.+|.|||++. +|||||-..|||+...-.|||+|||+++...+..-+.
T Consensus 474 ~GELr~yLq~-nk~sL~l~tL~ly~~Qi~talaYLeSkr-fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~ 551 (974)
T KOG4257|consen 474 LGELREYLQQ-NKDSLPLRTLTLYCYQICTALAYLESKR-FVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASR 551 (974)
T ss_pred chhHHHHHHh-ccccchHHHHHHHHHHHHHHHHHHHhhc-hhhhhhhhhheeecCcceeeecccchhhhccccchhhccc
Confidence 9999999965 4678999999999999999999999999 9999999999999999999999999999876654322
Q ss_pred c--CCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 219 T--NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 219 g--t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
| .+-|||||.+.-..++.+||||-|||.+||++. |..||.+ +...++...+...-+.+.|+.||+.+..|+.
T Consensus 552 ~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqg-----vkNsDVI~~iEnGeRlP~P~nCPp~LYslms 626 (974)
T KOG4257|consen 552 GKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQG-----VKNSDVIGHIENGERLPCPPNCPPALYSLMS 626 (974)
T ss_pred cccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccc-----ccccceEEEecCCCCCCCCCCCChHHHHHHH
Confidence 2 357999999999999999999999999999876 6777765 3455666677777788899999999999999
Q ss_pred HhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 296 KCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
+||+.+|.+||++.++...|..+.+
T Consensus 627 kcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 627 KCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred HHhccCcccCCcHHHHHHHHHHHHH
Confidence 9999999999999999988866654
|
|
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=312.02 Aligned_cols=248 Identities=19% Similarity=0.255 Sum_probs=203.2
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
.+.+.+++.+|.|+||.||++.+. ++..||+|++........+.+.+|++++++++||||+++++++..+...++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 456788899999999999999975 5899999999765444456799999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----C
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----K 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 215 (497)
+++++|.+++... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... .
T Consensus 84 ~~~~~L~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (280)
T cd06611 84 CDGGALDSIMLEL-ERGLTEPQIRYVCRQMLEALNFLHSHK-VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRD 161 (280)
T ss_pred cCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEECCCCCEEEccCccchhhcccccccc
Confidence 9999999988652 457999999999999999999999999 999999999999999999999999988654332 2
Q ss_pred ccccCCCCCCccccc-----cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccc-cccCCCCCHHHHHH
Q 010932 216 SYSTNLAYTPPEFLR-----TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMD-SSLEGQYANEDATQ 289 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 289 (497)
...+++.|+|||.+. +..++.++|||||||++|+|++|+.||......... ..+.. .......+...+..
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 237 (280)
T cd06611 162 TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVL----LKILKSEPPTLDQPSKWSSS 237 (280)
T ss_pred eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHH----HHHhcCCCCCcCCcccCCHH
Confidence 345788999999985 344678999999999999999999887543211110 00110 00011223446678
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 290 LVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 290 l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+.+++.+||+.+|.+|||+.+++++
T Consensus 238 ~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 238 FNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred HHHHHHHHhccChhhCcCHHHHhcC
Confidence 9999999999999999999999986
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=310.18 Aligned_cols=252 Identities=15% Similarity=0.217 Sum_probs=202.7
Q ss_pred cccccccCCCCCCcEEEEEEEcC-----CcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeee-CCceEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN-----NRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAE-GDERLL 135 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~l 135 (497)
.+.+.+.+|+|+||.||+|.+.+ +..|++|++..... ...+.+.+|+.+++.++||||+++++++.. +...++
T Consensus 7 ~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 86 (280)
T cd05043 7 RVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFV 86 (280)
T ss_pred heEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEE
Confidence 34566778999999999999765 68899999875432 224568899999999999999999998766 467899
Q ss_pred EEEcCCCCChhhhhhcCCC------CCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 136 VAQYMPNDTLSKHLFHWDK------QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~------~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
+++|+++++|.+++..... ..+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||+++
T Consensus 87 ~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kl~d~g~~~ 165 (280)
T cd05043 87 LYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG-VIHKDIAARNCVIDEELQVKITDNALSR 165 (280)
T ss_pred EEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCHhhEEEcCCCcEEECCCCCcc
Confidence 9999999999999865322 46899999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCC
Q 010932 210 NSRDGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282 (497)
Q Consensus 210 ~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (497)
...... ...++..|+|||++.+..++.++|||||||++||+++ |+.|+.......+.. .+........
T Consensus 166 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~ 240 (280)
T cd05043 166 DLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAA-----YLKDGYRLAQ 240 (280)
T ss_pred cccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHH-----HHHcCCCCCC
Confidence 543321 2234667999999988889999999999999999999 887775432221111 1111111122
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 283 ANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 283 ~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
+..++..+.+++.+||+.||++|||+.++++.|+.+.+
T Consensus 241 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 241 PINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 33456789999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-39 Score=304.68 Aligned_cols=246 Identities=18% Similarity=0.200 Sum_probs=203.9
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC--CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS--WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
|.+++.+|.|+||.||.+... +++.+++|.+.... ......+.+|+.++++++|+||+++++++...+..+++|||+
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~ 81 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYA 81 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEec
Confidence 466788899999999999965 48999999986543 233467899999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----Cc
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KS 216 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 216 (497)
++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...... ..
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (256)
T cd08221 82 NGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG-ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET 160 (256)
T ss_pred CCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChHhEEEeCCCCEEECcCcceEEcccccccccc
Confidence 9999999997644567899999999999999999999999 999999999999999999999999998754333 24
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
..+++.|+|||.+.+..++.++||||||+++|+|++|..||........... +... .....+...+..+.+++.+
T Consensus 161 ~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~i~~ 235 (256)
T cd08221 161 VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVK----IVQG-NYTPVVSVYSSELISLVHS 235 (256)
T ss_pred cCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHH----HHcC-CCCCCccccCHHHHHHHHH
Confidence 5678999999999988889999999999999999999988754322211111 1111 1112234456789999999
Q ss_pred hcccCCCCCCCHHHHHHHh
Q 010932 297 CLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~l 315 (497)
||+.+|.+|||+.++++++
T Consensus 236 ~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 236 LLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred HcccCcccCCCHHHHhhCc
Confidence 9999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=308.93 Aligned_cols=247 Identities=21% Similarity=0.283 Sum_probs=199.4
Q ss_pred cccccCCCCCCcEEEEEEEcC-C---cEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 65 LIVSESGDKAPNVVYRGRLKN-N---RLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~~-~---~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
...+.+|+|+||.||+|.... + ..+|+|.+..... ...+.+..|+.+++.++||||+++.+++...+..++||||
T Consensus 8 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (268)
T cd05063 8 TKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEY 87 (268)
T ss_pred eEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEc
Confidence 344567999999999999753 3 3799999875432 2246789999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCc---
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS--- 216 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--- 216 (497)
+++++|.+++... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++........
T Consensus 88 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 165 (268)
T cd05063 88 MENGALDKYLRDH-DGEFSSYQLVGMLRGIAAGMKYLSDMN-YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTY 165 (268)
T ss_pred CCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEEcCCCcEEECCCccceecccccccce
Confidence 9999999998652 467899999999999999999999999 99999999999999999999999999875433211
Q ss_pred ----cccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHH
Q 010932 217 ----YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291 (497)
Q Consensus 217 ----~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (497)
...++.|+|||++.+..++.++|||||||++|||++ |+.|+......... ..+........+...+..+.
T Consensus 166 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~~~ 240 (268)
T cd05063 166 TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVM-----KAINDGFRLPAPMDCPSAVY 240 (268)
T ss_pred eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHH-----HHHhcCCCCCCCCCCCHHHH
Confidence 112356999999998889999999999999999998 88877543221111 11111112223344567899
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHhhhh
Q 010932 292 ELASKCLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
+++.+||+.+|++||++.+|++.|+.+
T Consensus 241 ~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 241 QLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=308.64 Aligned_cols=249 Identities=22% Similarity=0.289 Sum_probs=201.0
Q ss_pred cccccccCCCCCCcEEEEEEEc-C---CcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-N---NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~---~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
.+++.+.+|+|+||.||+|.+. + +..+|+|.++..... ..+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (267)
T cd05066 5 CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVT 84 (267)
T ss_pred HeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEE
Confidence 3466778899999999999864 2 347999998754322 2457899999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCc-
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS- 216 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~- 216 (497)
||+++++|.+++... ...+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||++........
T Consensus 85 e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd05066 85 EYMENGSLDAFLRKH-DGQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 162 (267)
T ss_pred EcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-EeehhhchhcEEECCCCeEEeCCCCcccccccccce
Confidence 999999999999653 356899999999999999999999999 99999999999999999999999999886543221
Q ss_pred ------cccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHH
Q 010932 217 ------YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQ 289 (497)
Q Consensus 217 ------~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (497)
..++..|+|||++.+..++.++|||||||++|++++ |..|+........... +........+...+..
T Consensus 163 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 237 (267)
T cd05066 163 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKA-----IEEGYRLPAPMDCPAA 237 (267)
T ss_pred eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHH-----HhCCCcCCCCCCCCHH
Confidence 112457999999998889999999999999999886 8877654322111110 1111112223445678
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHhhhh
Q 010932 290 LVELASKCLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 290 l~~li~~cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
+.+++.+||+.+|.+|||+.++++.|+.+
T Consensus 238 ~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 238 LHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 99999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=316.88 Aligned_cols=247 Identities=18% Similarity=0.208 Sum_probs=199.9
Q ss_pred CCcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCC--CCCChhHHHHHHHHhccCC-CCcceeeeeeeeeCCceEEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQ--SWPDPHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 137 (497)
-..|.++++||+|+.+.||++...+.+.+|+|.+... +......|.+|+.+|.+|+ |.+||++++|-..++.+||||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 3678899999999999999999888888888876533 2233567999999999995 999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC--
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK-- 215 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 215 (497)
||- ..+|..+|..... .++.-.+..+..|++.++.++|..| |||.||||.|+|+- .|.+||+|||+|......+
T Consensus 440 E~G-d~DL~kiL~k~~~-~~~~~~lk~ywkqML~aV~~IH~~g-IVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTs 515 (677)
T KOG0596|consen 440 ECG-DIDLNKILKKKKS-IDPDWFLKFYWKQMLLAVKTIHQHG-IVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTS 515 (677)
T ss_pred ecc-cccHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHHHhc-eeecCCCcccEEEE-eeeEEeeeechhcccCccccc
Confidence 996 4689999976433 3332378899999999999999999 99999999999997 6899999999998766553
Q ss_pred ----ccccCCCCCCccccccC-----------CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCC
Q 010932 216 ----SYSTNLAYTPPEFLRTG-----------RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEG 280 (497)
Q Consensus 216 ----~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (497)
+.+||+.||+||.+... +++.++|||||||+||+|+.|+.||.... . ....+..+.++...-
T Consensus 516 I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~-n--~~aKl~aI~~P~~~I 592 (677)
T KOG0596|consen 516 IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII-N--QIAKLHAITDPNHEI 592 (677)
T ss_pred eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH-H--HHHHHHhhcCCCccc
Confidence 57899999999998632 36789999999999999999998874321 1 123344555554433
Q ss_pred CCCHHHHH-HHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 281 QYANEDAT-QLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 281 ~~~~~~~~-~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
++|..-+. ++.++++.||++||++|||+.++|++
T Consensus 593 efp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 593 EFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred cccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 44332222 29999999999999999999999985
|
|
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=316.29 Aligned_cols=243 Identities=17% Similarity=0.244 Sum_probs=184.0
Q ss_pred ccCCCCCCcEEEEEEEc---CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeee--CCceEEEEEcCCC
Q 010932 68 SESGDKAPNVVYRGRLK---NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE--GDERLLVAQYMPN 142 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~ 142 (497)
.+||+|+||+||+|..+ +++.||+|.+.... ....+.+|+.+|++++||||+++++++.. ....++||||+.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE- 83 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-
Confidence 46899999999999965 36789999987543 23568899999999999999999998854 456889999985
Q ss_pred CChhhhhhcC-------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEe----CCCCCeeEcccCCcccc
Q 010932 143 DTLSKHLFHW-------DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF----DEDGDPRLSSFGLMKNS 211 (497)
Q Consensus 143 ~~L~~~l~~~-------~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfgla~~~ 211 (497)
++|.+++... ....+++..+..++.||+.||.|||+.+ ++||||||+|||+ +.++.+||+|||+++..
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07868 84 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEecCCCCcCcEEEeecCceecc
Confidence 5787776432 1235899999999999999999999999 9999999999999 45688999999999764
Q ss_pred CCC-------CccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc--------ccccccc
Q 010932 212 RDG-------KSYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK--------NLLLLMD 275 (497)
Q Consensus 212 ~~~-------~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~--------~~~~~~~ 275 (497)
... ....+|+.|+|||++.+. .++.++|||||||++|+|++|+.||.....+..... .+...+.
T Consensus 163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T cd07868 163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 242 (317)
T ss_pred CCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcC
Confidence 322 235678999999999864 589999999999999999999988753211100000 0000000
Q ss_pred --------------------cccC-CC------------CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 276 --------------------SSLE-GQ------------YANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 276 --------------------~~~~-~~------------~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.... .. .....+..+.+|+.+||+.||.+|||+++++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h 314 (317)
T cd07868 243 FPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 314 (317)
T ss_pred CCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000 00 000113458899999999999999999999974
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=343.14 Aligned_cols=249 Identities=19% Similarity=0.233 Sum_probs=196.4
Q ss_pred CCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeC--CceEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEG--DERLL 135 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 135 (497)
+..|.+++.||.|+||+||++.+.. +..||+|++...... ....|..|+.+|+.++|||||+++++|... ..++|
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyI 91 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYI 91 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEE
Confidence 4567889999999999999999764 889999998754322 245789999999999999999999988653 56899
Q ss_pred EEEcCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCC------CcccccCCCcceEeCC-----------
Q 010932 136 VAQYMPNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNSQN------RKLYHDLNAYRVLFDE----------- 196 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lh~~~------~iiH~Dlkp~Nill~~----------- 196 (497)
||||+++++|.++|... ....+++..++.|+.||+.||.|||+.+ +||||||||+||||+.
T Consensus 92 VMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~ 171 (1021)
T PTZ00266 92 LMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQ 171 (1021)
T ss_pred EEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccccc
Confidence 99999999999998642 1357999999999999999999999842 2999999999999964
Q ss_pred ------CCCeeEcccCCccccCCC---CccccCCCCCCcccccc--CCCCcccceeehhhhHHHHhhCCCCCCchhhHHH
Q 010932 197 ------DGDPRLSSFGLMKNSRDG---KSYSTNLAYTPPEFLRT--GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVI 265 (497)
Q Consensus 197 ------~~~~kl~Dfgla~~~~~~---~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~ 265 (497)
.+.+||+|||++...... ....||+.|+|||++.+ ..++.++||||||||||+|+||..||........
T Consensus 172 ~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~q 251 (1021)
T PTZ00266 172 ANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQ 251 (1021)
T ss_pred ccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHH
Confidence 345899999999865432 34568999999999864 4588999999999999999999998854321110
Q ss_pred hccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+...+..... ......+..+.+||..||+.+|.+|||+.++|.+
T Consensus 252 ----li~~lk~~p~-lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 252 ----LISELKRGPD-LPIKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred ----HHHHHhcCCC-CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 0001110000 0112346779999999999999999999999964
|
|
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=311.43 Aligned_cols=249 Identities=22% Similarity=0.253 Sum_probs=195.3
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
+.+++.||.|++|.||+|..+ +|..||||+++..... ....+.+|+.+++.++||||+++++++..+...++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFL 81 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecC
Confidence 567788899999999999976 5899999998654322 2457889999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----C
Q 010932 141 PNDTLSKHLFHWD-KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----K 215 (497)
Q Consensus 141 ~~~~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 215 (497)
+ ++|.+++.... ...+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... .
T Consensus 82 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (285)
T cd07861 82 S-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR-VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYT 159 (285)
T ss_pred C-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEEcCCCcEEECcccceeecCCCccccc
Confidence 7 67888875433 367999999999999999999999999 999999999999999999999999998754322 2
Q ss_pred ccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccc--------------------cccc
Q 010932 216 SYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNL--------------------LLLM 274 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~--------------------~~~~ 274 (497)
...+++.|+|||++.+. .++.++|||||||++|+|+||+.||............. ....
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (285)
T cd07861 160 HEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTF 239 (285)
T ss_pred CCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhc
Confidence 23457899999988754 47889999999999999999998775432110000000 0000
Q ss_pred cc---ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 275 DS---SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 275 ~~---~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.. ..........+.++.+++.+||+.||.+|||+.+|+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 240 PKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred cccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00 00001112356778999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=332.19 Aligned_cols=248 Identities=17% Similarity=0.185 Sum_probs=188.3
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCC------CcceeeeeeeeeC-Cce
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRH------KRLVNLIGCCAEG-DER 133 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~~~~~~~~~-~~~ 133 (497)
..|.+++.||+|+||+||+|.+. .++.||||+++.... ....+..|+.+++.++| ++|+.+++++... .+.
T Consensus 129 ~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~ 207 (467)
T PTZ00284 129 QRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK-YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM 207 (467)
T ss_pred CcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh-hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence 34677888999999999999975 488999999964321 23445667777766654 5588898888764 578
Q ss_pred EEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCcccccCCCcceEeCCCC--------------
Q 010932 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNS-QNRKLYHDLNAYRVLFDEDG-------------- 198 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~-~~~iiH~Dlkp~Nill~~~~-------------- 198 (497)
++||+++ +++|.+++.. .+.+++..+..|+.||+.||.|||+ .+ ||||||||+|||++.++
T Consensus 208 ~iv~~~~-g~~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~yLH~~~g-IiHrDlKP~NILl~~~~~~~~~~~~~~~~~~ 283 (467)
T PTZ00284 208 CIVMPKY-GPCLLDWIMK--HGPFSHRHLAQIIFQTGVALDYFHTELH-LMHTDLKPENILMETSDTVVDPVTNRALPPD 283 (467)
T ss_pred EEEEecc-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEecCCcccccccccccCCC
Confidence 9999988 7889888865 4679999999999999999999998 47 99999999999998765
Q ss_pred --CeeEcccCCccccCC-CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhc------cc
Q 010932 199 --DPRLSSFGLMKNSRD-GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRG------KN 269 (497)
Q Consensus 199 --~~kl~Dfgla~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~------~~ 269 (497)
.+||+|||.+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ..
T Consensus 284 ~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~ 363 (467)
T PTZ00284 284 PCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGR 363 (467)
T ss_pred CceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCC
Confidence 499999998865433 245678999999999999999999999999999999999999886532111000 00
Q ss_pred c-------------cccccc--ccCCCCC---------------HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 270 L-------------LLLMDS--SLEGQYA---------------NEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 270 ~-------------~~~~~~--~~~~~~~---------------~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+ ..+.+. .+..... ......+.+||.+||+.||++|||+.++|+|
T Consensus 364 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 364 LPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTH 438 (467)
T ss_pred CCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcC
Confidence 0 000000 0000000 0123567899999999999999999999986
|
|
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=310.10 Aligned_cols=242 Identities=20% Similarity=0.291 Sum_probs=199.6
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
+.+++.||.|+||.||+|.+. ++..||+|++..... ...+.+.+|+.++++++||||+++++++..+...++||||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 345667899999999999875 488999999874432 234578999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC----cc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK----SY 217 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~ 217 (497)
+++|.+++. ...+++..+..++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++....... ..
T Consensus 86 ~~~L~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~-ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06642 86 GGSALDLLK---PGPLEETYIATILREILKGLDYLHSER-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred CCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcCC-eeccCCChheEEEeCCCCEEEccccccccccCcchhhhcc
Confidence 999999884 357899999999999999999999999 9999999999999999999999999987544322 23
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHh
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKC 297 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 297 (497)
.++..|+|||++.+..++.++|||||||++|||++|+.|+........ ...+........+...+..+.+++.+|
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~~ 236 (277)
T cd06642 162 VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV-----LFLIPKNSPPTLEGQYSKPFKEFVEAC 236 (277)
T ss_pred cCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH-----HhhhhcCCCCCCCcccCHHHHHHHHHH
Confidence 567889999999988899999999999999999999987643211111 111111112223344567799999999
Q ss_pred cccCCCCCCCHHHHHHH
Q 010932 298 LQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 298 l~~dp~~Rps~~~ll~~ 314 (497)
|+.+|++|||+.+++++
T Consensus 237 l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 237 LNKDPRFRPTAKELLKH 253 (277)
T ss_pred ccCCcccCcCHHHHHHh
Confidence 99999999999999986
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-39 Score=315.83 Aligned_cols=253 Identities=20% Similarity=0.308 Sum_probs=203.4
Q ss_pred cccccccCCCCCCcEEEEEEEcC--------CcEEEEEEccCCCCC-ChhHHHHHHHHhccC-CCCcceeeeeeeeeCCc
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN--------NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDE 132 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 132 (497)
.+.+.+.||+|+||.||++.... +..||+|.++..... ..+.+.+|+.+++++ +||||+++++++.....
T Consensus 13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 92 (334)
T cd05100 13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 92 (334)
T ss_pred HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCc
Confidence 45778889999999999997521 237999998754322 246789999999999 79999999999999999
Q ss_pred eEEEEEcCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC
Q 010932 133 RLLVAQYMPNDTLSKHLFHWD--------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG 198 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~ 198 (497)
.++++||+++++|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++
T Consensus 93 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nill~~~~ 171 (334)
T cd05100 93 LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK-CIHRDLAARNVLVTEDN 171 (334)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCC
Confidence 999999999999999986421 235888999999999999999999999 99999999999999999
Q ss_pred CeeEcccCCccccCCCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccc
Q 010932 199 DPRLSSFGLMKNSRDGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLL 271 (497)
Q Consensus 199 ~~kl~Dfgla~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~ 271 (497)
.+||+|||+++...... ...++..|+|||++.+..++.++|||||||++|||++ |..|+..........
T Consensus 172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~---- 247 (334)
T cd05100 172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK---- 247 (334)
T ss_pred cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHH----
Confidence 99999999987554322 1223457999999998899999999999999999998 676665433222111
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 272 LLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
.+........+...+..+.+|+.+||+.+|++|||+.++++.|+.+...
T Consensus 248 -~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~ 296 (334)
T cd05100 248 -LLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV 296 (334)
T ss_pred -HHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence 1111122233445667899999999999999999999999999988743
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-39 Score=303.90 Aligned_cols=245 Identities=18% Similarity=0.235 Sum_probs=202.3
Q ss_pred cccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
.+.+.+.+|.|+||.||++.+.+ +..|++|.+..... .+.+.+|+++++.++||||+++++++......++++||++
T Consensus 4 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 81 (256)
T cd06612 4 VFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG 81 (256)
T ss_pred cchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence 45667778999999999999875 88999999875432 6789999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC----cc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK----SY 217 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~ 217 (497)
+++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... ..
T Consensus 82 ~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 159 (256)
T cd06612 82 AGSVSDIMKI-TNKTLTEEEIAAILYQTLKGLEYLHSNK-KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTV 159 (256)
T ss_pred CCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEECCCCcEEEcccccchhcccCccccccc
Confidence 9999999854 2467899999999999999999999999 9999999999999999999999999988654332 34
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHh
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKC 297 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 297 (497)
.++..|+|||++.+..++.++|||||||++|+|++|+.|+........... ... ........+...+..+.+++.+|
T Consensus 160 ~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~i~~~ 236 (256)
T cd06612 160 IGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFM-IPN--KPPPTLSDPEKWSPEFNDFVKKC 236 (256)
T ss_pred cCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhh-hcc--CCCCCCCchhhcCHHHHHHHHHH
Confidence 578899999999988899999999999999999999988754321110000 000 00011122344567899999999
Q ss_pred cccCCCCCCCHHHHHHH
Q 010932 298 LQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 298 l~~dp~~Rps~~~ll~~ 314 (497)
|+.||++|||+.+++.+
T Consensus 237 l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 237 LVKDPEERPSAIQLLQH 253 (256)
T ss_pred HhcChhhCcCHHHHhcC
Confidence 99999999999999874
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=321.59 Aligned_cols=248 Identities=20% Similarity=0.226 Sum_probs=194.1
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeC------Cc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG------DE 132 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~ 132 (497)
+.|.+++.||.|+||+||++... +++.||||++..... ...+.+.+|+.+|+.++||||+++++++... ..
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07878 15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNE 94 (343)
T ss_pred hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCc
Confidence 45678888999999999999975 588999999875422 2245688999999999999999999987543 34
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
.+++++++ +++|.+++. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++...
T Consensus 95 ~~~~~~~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~ 169 (343)
T cd07878 95 VYLVTNLM-GADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAG-IIHRDLKPSNVAVNEDCELRILDFGLARQAD 169 (343)
T ss_pred EEEEeecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCChhhEEECCCCCEEEcCCccceecC
Confidence 68999988 788988774 457999999999999999999999999 9999999999999999999999999998654
Q ss_pred CC-CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhc-------cccccccccc------
Q 010932 213 DG-KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRG-------KNLLLLMDSS------ 277 (497)
Q Consensus 213 ~~-~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~-------~~~~~~~~~~------ 277 (497)
.. ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||+......... ..........
T Consensus 170 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (343)
T cd07878 170 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHAR 249 (343)
T ss_pred CCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHH
Confidence 43 34578999999999976 568999999999999999999998886432111000 0000000000
Q ss_pred ----cCCCCC--------HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 278 ----LEGQYA--------NEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 278 ----~~~~~~--------~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.....+ ...++.+.+|+.+||+.||++|||+.+++.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 250 KYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000 1134468899999999999999999999986
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-39 Score=306.08 Aligned_cols=244 Identities=18% Similarity=0.259 Sum_probs=200.0
Q ss_pred ccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCC------hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD------PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
+.+.+.+|.|+||.||+|...+|+.+|||.+....... ...+.+|+++++.++|+||+++++++...+..++|+
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM 81 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence 45667789999999999998789999999986542211 246889999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC----
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD---- 213 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 213 (497)
||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 158 (265)
T cd06631 82 EFVPGGSISSILNR--FGPLPEPVFCKYTKQILDGVAYLHNNC-VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH 158 (265)
T ss_pred ecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc
Confidence 99999999999965 357899999999999999999999999 99999999999999999999999998874321
Q ss_pred ------CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccccccc-ccCCCCCHHH
Q 010932 214 ------GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDS-SLEGQYANED 286 (497)
Q Consensus 214 ------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 286 (497)
.....++..|+|||++.+..++.++|||||||++|+|++|..||......... ...... ......+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 234 (265)
T cd06631 159 GTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAM----FYIGAHRGLMPRLPDSF 234 (265)
T ss_pred ccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHH----HHhhhccCCCCCCCCCC
Confidence 12345788999999999888999999999999999999999887542211100 000000 1122334456
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 287 ATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 287 ~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+..+.+++.+||+.+|.+|||+.+++++
T Consensus 235 ~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 235 SAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred CHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 7789999999999999999999999874
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-39 Score=307.69 Aligned_cols=244 Identities=20% Similarity=0.269 Sum_probs=203.3
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
.+..++.+|.|+||.||+|.+. ++..||||++..... .....+.+|+.+++.++||||+++++++.++...++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 3456778899999999999975 488999999875432 23457899999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----Cc
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KS 216 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 216 (497)
++++|.+++.. ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 85 ~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~-ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (277)
T cd06640 85 GGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEK-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 160 (277)
T ss_pred CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC-ccCcCCChhhEEEcCCCCEEEcccccceeccCCcccccc
Confidence 99999998853 56899999999999999999999998 999999999999999999999999998754432 23
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
..++..|+|||++.+..++.++|||||||++|+|+||..|+........ ............+...+..+.+++.+
T Consensus 161 ~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~ 235 (277)
T cd06640 161 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV-----LFLIPKNNPPTLTGEFSKPFKEFIDA 235 (277)
T ss_pred ccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH-----hhhhhcCCCCCCchhhhHHHHHHHHH
Confidence 3567889999999988899999999999999999999987754322111 11111122234455678889999999
Q ss_pred hcccCCCCCCCHHHHHHHh
Q 010932 297 CLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~l 315 (497)
||+.+|++|||+.+++.+-
T Consensus 236 ~l~~~p~~Rp~~~~il~~~ 254 (277)
T cd06640 236 CLNKDPSFRPTAKELLKHK 254 (277)
T ss_pred HcccCcccCcCHHHHHhCh
Confidence 9999999999999999873
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-40 Score=297.49 Aligned_cols=242 Identities=22% Similarity=0.248 Sum_probs=204.5
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChh---HHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPH---QFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~---~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
...++.||+|.||+|.+++-+ +|+.+|||++++......+ .-+.|-++|+..+||.+..+.-.|+..+++|+||||
T Consensus 170 FdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMey 249 (516)
T KOG0690|consen 170 FDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEY 249 (516)
T ss_pred hhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEE
Confidence 356777899999999999976 5999999999876444333 456788999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC----CCC
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR----DGK 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----~~~ 215 (497)
..||.|.-+|.+ ...+++...+.+..+|+.||.|||+++ ||.||||.+|.|+|.+|++||+|||+++... ..+
T Consensus 250 anGGeLf~HLsr--er~FsE~RtRFYGaEIvsAL~YLHs~~-ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~k 326 (516)
T KOG0690|consen 250 ANGGELFFHLSR--ERVFSEDRTRFYGAEIVSALGYLHSRN-IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTK 326 (516)
T ss_pred ccCceEeeehhh--hhcccchhhhhhhHHHHHHhhhhhhCC-eeeeechhhhheeccCCceEeeecccchhcccccceec
Confidence 999999988865 678999999999999999999999999 9999999999999999999999999998532 336
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
+++|||.|+|||++....|....|+|.+|||+|||++|+.||.......+... ++-. .-.+|...++++..|+.
T Consensus 327 TFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeL----Il~e--d~kFPr~ls~eAktLLs 400 (516)
T KOG0690|consen 327 TFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFEL----ILME--DLKFPRTLSPEAKTLLS 400 (516)
T ss_pred cccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHH----HHhh--hccCCccCCHHHHHHHH
Confidence 78999999999999999999999999999999999999999976533322111 1111 12467778889999999
Q ss_pred HhcccCCCCCC-----CHHHHHHH
Q 010932 296 KCLQYEAKDRP-----DVKFLLSA 314 (497)
Q Consensus 296 ~cl~~dp~~Rp-----s~~~ll~~ 314 (497)
.+|.+||.+|. .+.+|.++
T Consensus 401 GLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 401 GLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred HHhhcChHhhcCCCchhHHHHHhh
Confidence 99999999995 34555543
|
|
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=310.65 Aligned_cols=249 Identities=20% Similarity=0.277 Sum_probs=201.7
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
++++++.+|+|+||.||++.+. +|..||+|.++.... .....+.+|+.++++++||||+++++.+...+..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 4678889999999999999986 589999999875322 22457899999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcC-CCcccccCCCcceEeCCCCCeeEcccCCccccCCC--Cc
Q 010932 141 PNDTLSKHLFHWD-KQPLPWEMRVRVAYYIAQALDHCNSQ-NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KS 216 (497)
Q Consensus 141 ~~~~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~lh~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~ 216 (497)
++++|..++.... ...+++..+..++.+++.||.|||+. + ++|+||||+||+++.++.++|+|||++...... ..
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN-IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKT 160 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC-EeeCCCCHHHEEECCCCCEEEeecCCcccccCCcccc
Confidence 9999998885421 23789999999999999999999974 6 999999999999999999999999998754322 33
Q ss_pred cccCCCCCCccccccCC------CCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGR------VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~------~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (497)
..+++.|+|||.+.+.. ++.++|||||||++|+|++|+.||.......... ....+.. ......+...+.++
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~ 238 (286)
T cd06622 161 NIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFA-QLSAIVD-GDPPTLPSGYSDDA 238 (286)
T ss_pred CCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHH-HHHHHhh-cCCCCCCcccCHHH
Confidence 45778999999986543 4889999999999999999999875432221111 1111111 11233455578889
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHH
Q 010932 291 VELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 291 ~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+|+.+||+.+|++||++.+++.+
T Consensus 239 ~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 239 QDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred HHHHHHHcccCcccCCCHHHHhcC
Confidence 999999999999999999999985
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-39 Score=312.08 Aligned_cols=252 Identities=20% Similarity=0.319 Sum_probs=199.3
Q ss_pred CCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
.++.+.+++.||.|+||.||+|..+ +++.||+|.+..... .....+.+|+.+++.++||||+++++++......++||
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 3567888999999999999999976 488999999875432 22456889999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 214 (497)
||++ ++|.+++... ...+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.++|+|||++......
T Consensus 84 e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 160 (301)
T cd07873 84 EYLD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 160 (301)
T ss_pred eccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCc
Confidence 9996 5888888653 457899999999999999999999999 999999999999999999999999998754322
Q ss_pred -CccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhc-----------cccccccc------
Q 010932 215 -KSYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRG-----------KNLLLLMD------ 275 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~-----------~~~~~~~~------ 275 (497)
....+++.|+|||++.+. .++.++|||||||++|+|+||+.||.......... ........
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (301)
T cd07873 161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKS 240 (301)
T ss_pred ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccc
Confidence 223567899999998754 47889999999999999999998876532211100 00000000
Q ss_pred ---cccCC----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 276 ---SSLEG----QYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 276 ---~~~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+.... ......+..+.+||.+||+.||.+|||+.+++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 241 YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 00000 0112346678999999999999999999999985
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-39 Score=304.63 Aligned_cols=250 Identities=22% Similarity=0.278 Sum_probs=201.5
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
.+.+.+.+|.|+||+||+|... ++..+++|++..... ...+.+.+|+++++.++|+||+++++.+..++..++|+|++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 81 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL 81 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence 3567788899999999999965 588999999875432 24567999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC----
Q 010932 141 PNDTLSKHLFHWDK-QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK---- 215 (497)
Q Consensus 141 ~~~~L~~~l~~~~~-~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 215 (497)
++++|.+++..... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~-i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (267)
T cd06610 82 SGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG-QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR 160 (267)
T ss_pred CCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc
Confidence 99999999965332 57899999999999999999999999 9999999999999999999999999987544322
Q ss_pred ----ccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCC-CHHHHHH
Q 010932 216 ----SYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY-ANEDATQ 289 (497)
Q Consensus 216 ----~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 289 (497)
...++..|+|||++... .++.++|||||||++|+|++|+.|+............... ......... ....+..
T Consensus 161 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 239 (267)
T cd06610 161 KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN-DPPSLETGADYKKYSKS 239 (267)
T ss_pred cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC-CCCCcCCccccccccHH
Confidence 23578899999999876 7899999999999999999999887533211111110000 011111111 1245678
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 290 LVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 290 l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+.+++.+||+.||++|||+.+++.+
T Consensus 240 ~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 240 FRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred HHHHHHHHcCCChhhCcCHHHHhhC
Confidence 9999999999999999999999875
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-39 Score=309.80 Aligned_cols=249 Identities=21% Similarity=0.291 Sum_probs=197.6
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
.+.+++.+|+|+||.||++..+ +|+.||+|++..... ...+.+.+|+.+++.++||||+++++++......++||||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~ 81 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY 81 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence 3567788899999999999986 489999999865432 2235688999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC----
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK---- 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 215 (497)
+++++|..++.. ...+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~l~~~~~~--~~~~~~~~~~~~~~ql~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07847 82 CDHTVLNELEKN--PRGVPEHLIKKIIWQTLQAVNFCHKHN-CIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYT 158 (286)
T ss_pred cCccHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCChhhEEEcCCCcEEECccccceecCCCccccc
Confidence 999988887643 457999999999999999999999999 9999999999999999999999999988654432
Q ss_pred ccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc---cccc-------cc----------
Q 010932 216 SYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK---NLLL-------LM---------- 274 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~---~~~~-------~~---------- 274 (497)
...++..|+|||++.+ ..++.++|||||||++|+|++|+.||........... .... ..
T Consensus 159 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07847 159 DYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLS 238 (286)
T ss_pred CcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccccc
Confidence 3456789999999876 4578999999999999999999988764321110000 0000 00
Q ss_pred ccccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 275 DSSLEGQY-----ANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 275 ~~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+...... ....+..+.+|+.+||+.+|++|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 239 IPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred CCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 00000000 01245779999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-40 Score=321.98 Aligned_cols=243 Identities=21% Similarity=0.297 Sum_probs=209.2
Q ss_pred ccccCCCCCCcEEEEEEEcC--Cc--EEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 66 IVSESGDKAPNVVYRGRLKN--NR--LVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 66 ~~~~lg~G~~g~V~~~~~~~--~~--~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
+.+.||+|.||+|++|.|.. |+ .||||+++..... ....|++|+.+|.+|+|||+|+|||+..+ ....||||.+
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa 192 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA 192 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence 34567999999999999864 44 7999999876554 46789999999999999999999999988 6789999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCccc--
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYS-- 218 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~-- 218 (497)
+.|+|.+.|+......|.......++.||+.|+.||.+++ +|||||-..|+|+-....|||+||||.+.......+.
T Consensus 193 plGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr-lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm 271 (1039)
T KOG0199|consen 193 PLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR-LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVM 271 (1039)
T ss_pred ccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh-hhhhhhhhhhheecccceeeeecccceeccCCCCcceEe
Confidence 9999999998867788999999999999999999999999 9999999999999999999999999999766554321
Q ss_pred -----cCCCCCCccccccCCCCcccceeehhhhHHHHhhCCC-CCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 219 -----TNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKH-IPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 219 -----gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
-...|+|||.++..+++.+||||+|||+||||+|+.. |..+. ....+...+|...+...|..|++++.+
T Consensus 272 ~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~-----~g~qIL~~iD~~erLpRPk~csedIY~ 346 (1039)
T KOG0199|consen 272 APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC-----RGIQILKNIDAGERLPRPKYCSEDIYQ 346 (1039)
T ss_pred cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCC-----CHHHHHHhccccccCCCCCCChHHHHH
Confidence 2467999999999999999999999999999999664 33332 223345556666666778899999999
Q ss_pred HHHHhcccCCCCCCCHHHHHHHh
Q 010932 293 LASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~l 315 (497)
++..||..+|.+|||+..|.+.+
T Consensus 347 imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 347 IMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred HHHHhccCCccccccHHHHHHhH
Confidence 99999999999999999997544
|
|
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=307.94 Aligned_cols=242 Identities=19% Similarity=0.307 Sum_probs=196.7
Q ss_pred cCCCCCCcEEEEEEEcC-------CcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 69 ESGDKAPNVVYRGRLKN-------NRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
.+|.|+||.||+|...+ +..||||.+..... .....+.+|+.+++.++||||+++++++......++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 46999999999998643 26899998865432 33567999999999999999999999999988999999999
Q ss_pred CCCChhhhhhcC-----CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC-----CeeEcccCCccc
Q 010932 141 PNDTLSKHLFHW-----DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG-----DPRLSSFGLMKN 210 (497)
Q Consensus 141 ~~~~L~~~l~~~-----~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~-----~~kl~Dfgla~~ 210 (497)
++++|.+++... ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++ .++|+|||+++.
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~ 160 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH-FIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD 160 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC-cccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence 999999998643 2245889999999999999999999999 99999999999999877 899999999875
Q ss_pred cCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCC
Q 010932 211 SRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYA 283 (497)
Q Consensus 211 ~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (497)
.... ....++..|+|||++.++.++.++|||||||++|+|+| |..|+......... ..+........+
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~-----~~~~~~~~~~~~ 235 (269)
T cd05044 161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVL-----QHVTAGGRLQKP 235 (269)
T ss_pred cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHH-----HHHhcCCccCCc
Confidence 4322 12234678999999999999999999999999999998 88776543221111 111111122334
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 010932 284 NEDATQLVELASKCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 284 ~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~ 316 (497)
...+..+.+++.+||+.+|.+|||+.++++.|+
T Consensus 236 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 236 ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 556788999999999999999999999999875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-39 Score=307.77 Aligned_cols=251 Identities=20% Similarity=0.268 Sum_probs=203.7
Q ss_pred cccccccCCCCCCcEEEEEEEcC-Cc----EEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN-NR----LVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~-~~----~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
++.+++.||+|+||+||+|.+++ |+ .||+|.+...... ....+.+|+.+++.++||||+++++++.. ...++|
T Consensus 8 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v 86 (279)
T cd05057 8 ELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLI 86 (279)
T ss_pred HcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEE
Confidence 45677888999999999999653 43 6899988765432 24578899999999999999999999987 788999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCc
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS 216 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~ 216 (497)
|||+++|+|.+++... ...+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||+++.......
T Consensus 87 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~ 164 (279)
T cd05057 87 TQLMPLGCLLDYVRNH-KDNIGSQYLLNWCVQIAKGMSYLEEKR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK 164 (279)
T ss_pred EecCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecccCcceEEEcCCCeEEECCCcccccccCccc
Confidence 9999999999998653 446999999999999999999999998 99999999999999999999999999986543321
Q ss_pred ------cccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHH
Q 010932 217 ------YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQ 289 (497)
Q Consensus 217 ------~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (497)
..++..|+|||.+....++.++|||||||++||+++ |+.|+.......+.. .+........+..++..
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 239 (279)
T cd05057 165 EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPD-----LLEKGERLPQPPICTID 239 (279)
T ss_pred ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHH-----HHhCCCCCCCCCCCCHH
Confidence 112467999999988889999999999999999998 888775543222211 11111112233445677
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 290 LVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 290 l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
+.+++.+||..||+.|||+.++++.|..+.+.
T Consensus 240 ~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 240 VYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred HHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 99999999999999999999999999988543
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-39 Score=303.48 Aligned_cols=245 Identities=19% Similarity=0.243 Sum_probs=203.6
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
|.+++.+|+|+||.||++... +|+.||+|.+..... .....+.+|+.++++++||||+++++++...+..++|+||+
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYC 81 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecC
Confidence 466788899999999999965 589999999865322 23457899999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC----c
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK----S 216 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 216 (497)
++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... .
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~ 160 (256)
T cd08218 82 EGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELART 160 (256)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhh
Confidence 9999999987644557899999999999999999999998 9999999999999999999999999987654332 3
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
..+++.|+|||++.+..++.++|||||||++++|++|+.|+............. . ......+...+..+.+++.+
T Consensus 161 ~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~li~~ 235 (256)
T cd08218 161 CIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKII----R-GSYPPVSSHYSYDLRNLVSQ 235 (256)
T ss_pred ccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHh----c-CCCCCCcccCCHHHHHHHHH
Confidence 457888999999998889999999999999999999998875433222111111 1 11122344567789999999
Q ss_pred hcccCCCCCCCHHHHHHH
Q 010932 297 CLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~ 314 (497)
||+.+|.+||++.+|+++
T Consensus 236 ~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 236 LFKRNPRDRPSVNSILEK 253 (256)
T ss_pred HhhCChhhCcCHHHHhhC
Confidence 999999999999999985
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-39 Score=313.49 Aligned_cols=247 Identities=20% Similarity=0.188 Sum_probs=202.8
Q ss_pred cccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCC---ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWP---DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
.+.+.+.+|.|++|+||++...+ ++.||||.+...... ..+.+..|+++++.++||||+++++.+......++|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 35677788999999999999765 899999999765432 34568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---- 214 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 214 (497)
|+.+++|.+++.......+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 82 YCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG-IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred ecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 999999999987655578999999999999999999999999 999999999999999999999999987643221
Q ss_pred -----------------------------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHH
Q 010932 215 -----------------------------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVI 265 (497)
Q Consensus 215 -----------------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~ 265 (497)
....||..|+|||++.+..++.++|||||||++|+|++|..||........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~ 240 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET 240 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH
Confidence 123567889999999988899999999999999999999998865432221
Q ss_pred hccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC----HHHHHHH
Q 010932 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPD----VKFLLSA 314 (497)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~~ll~~ 314 (497)
. ................+..+.+++.+||+.||++||| +.+++.+
T Consensus 241 ~----~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 241 F----SNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred H----HHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 1 1111111111111225778999999999999999999 8888774
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=304.51 Aligned_cols=246 Identities=15% Similarity=0.200 Sum_probs=186.2
Q ss_pred cCCCCCCcEEEEEEEcCC---cEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCC
Q 010932 69 ESGDKAPNVVYRGRLKNN---RLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDT 144 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~~~---~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 144 (497)
+||+|+||+||++...++ ..+++|.+..... ...+.+.+|+.+++.++||||+++++.+......++||||+++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 579999999999985432 3567777664432 235689999999999999999999999999999999999999999
Q ss_pred hhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC------CCc
Q 010932 145 LSKHLFHWD--KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD------GKS 216 (497)
Q Consensus 145 L~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------~~~ 216 (497)
|.+++.... ...+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.++|+|||++..... ...
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 160 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN-FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDD 160 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-eeccCCccceEEEcCCccEEecccccccccCcchhhhcccC
Confidence 999996532 245677788899999999999999999 99999999999999999999999999764221 223
Q ss_pred cccCCCCCCcccccc-------CCCCcccceeehhhhHHHHhhCCC-CCCchhhHHHhccccccccccccCCCCCHHHHH
Q 010932 217 YSTNLAYTPPEFLRT-------GRVIPESVIYSYGTVLLDLLSGKH-IPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~elltg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (497)
..++..|+|||++.. ..++.++|||||||++|||+++.. |+.........................+...+.
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (268)
T cd05086 161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSE 240 (268)
T ss_pred CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcH
Confidence 457789999998753 235789999999999999998654 443221111111000000000111222333567
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~l~ 316 (497)
.+.+++..|| .+|++|||+.+|++.|.
T Consensus 241 ~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 241 RWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 7889999999 67999999999998763
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-40 Score=311.57 Aligned_cols=246 Identities=26% Similarity=0.368 Sum_probs=198.8
Q ss_pred ccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChh--HHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 64 ELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPH--QFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~--~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
|++++.||+|+||+||++.... ++.||+|++......... ...+|+.++++++||||+++++++......++|||++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 4677889999999999999865 779999999866433222 3456999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcccc----CCCCc
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS----RDGKS 216 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~----~~~~~ 216 (497)
++++|.+++.. ...+++..+..++.||+.||.+||+.+ ++|+||||+||+++.++.++|+|||.+... .....
T Consensus 81 ~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~Lh~~~-i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 157 (260)
T PF00069_consen 81 PGGSLQDYLQK--NKPLSEEEILKIAYQILEALAYLHSKG-IVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNP 157 (260)
T ss_dssp TTEBHHHHHHH--HSSBBHHHHHHHHHHHHHHHHHHHHTT-EEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSS
T ss_pred ccccccccccc--ccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccc
Confidence 99999999973 578899999999999999999999999 999999999999999999999999998742 12234
Q ss_pred cccCCCCCCccccc-cCCCCcccceeehhhhHHHHhhCCCCCCchh---hHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLR-TGRVIPESVIYSYGTVLLDLLSGKHIPPSHA---LDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 217 ~~gt~~y~aPE~~~-~~~~~~~~Dv~slG~~l~elltg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
..++..|+|||++. +..++.++||||||+++|+|++|..|+.... ................. .........+.+
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ 235 (260)
T PF00069_consen 158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSS--QQSREKSEELRD 235 (260)
T ss_dssp SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHT--TSHTTSHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccc--cccchhHHHHHH
Confidence 56788999999998 7889999999999999999999998876541 11111111100010000 001112378999
Q ss_pred HHHHhcccCCCCCCCHHHHHHH
Q 010932 293 LASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~ 314 (497)
++.+||+.||++|||+.+++++
T Consensus 236 li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 236 LIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp HHHHHSSSSGGGSTTHHHHHTS
T ss_pred HHHHHccCChhHCcCHHHHhcC
Confidence 9999999999999999999874
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-39 Score=305.39 Aligned_cols=248 Identities=18% Similarity=0.211 Sum_probs=197.2
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--C--------hhHHHHHHHHhccCCCCcceeeeeeeeeCCc
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--D--------PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~--------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 132 (497)
+.+.+.+|.|+||.||+|... +|+.||||.++..... . .+.+.+|+.+++.++||||+++++++...+.
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 82 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY 82 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence 345667899999999999865 5899999988642111 0 2357889999999999999999999999999
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
.++||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||+++...
T Consensus 83 ~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 159 (272)
T cd06629 83 LSIFLEYVPGGSIGSCLRT--YGRFEEQLVRFFTEQVLEGLAYLHSKG-ILHRDLKADNLLVDADGICKISDFGISKKSD 159 (272)
T ss_pred eEEEEecCCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhCC-eeecCCChhhEEEcCCCeEEEeecccccccc
Confidence 9999999999999999865 367899999999999999999999999 9999999999999999999999999987543
Q ss_pred CC------CccccCCCCCCccccccCC--CCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCH
Q 010932 213 DG------KSYSTNLAYTPPEFLRTGR--VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYAN 284 (497)
Q Consensus 213 ~~------~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (497)
.. ....++..|+|||.+.... ++.++||||||+++|+|++|..|+...........................
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (272)
T cd06629 160 DIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSM 239 (272)
T ss_pred ccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccc
Confidence 22 2245778999999987654 789999999999999999999887533221111000000011111112223
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 285 EDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 285 ~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..+..+.+++.+||..+|++|||+.+++++
T Consensus 240 ~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 240 NLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred cCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 456789999999999999999999999975
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=302.28 Aligned_cols=245 Identities=20% Similarity=0.242 Sum_probs=202.2
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
|.+++.+|.|+||.||++... +++.+|||++...... ..+.+.+|+++|+.++||||+++++.+...+..++||||+
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYA 81 (256)
T ss_pred ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecC
Confidence 456778899999999999975 5889999998754322 2457899999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC-CCeeEcccCCccccCCC---Cc
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED-GDPRLSSFGLMKNSRDG---KS 216 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~~~---~~ 216 (497)
++++|.+++.......+++..+..++.+++.||.|||+++ ++|+||+|+||+++.+ +.++|+|||++...... ..
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (256)
T cd08220 82 PGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL-ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYT 160 (256)
T ss_pred CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccc
Confidence 9999999997654567899999999999999999999999 9999999999999855 45899999998865433 23
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
..++..|+|||.+.+..++.++||||||+++|+|++|+.|+........... ... ......+...+..+.+++.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~l~~li~~ 235 (256)
T cd08220 161 VVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLK----IMS-GTFAPISDRYSPDLRQLILS 235 (256)
T ss_pred cccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHH----HHh-cCCCCCCCCcCHHHHHHHHH
Confidence 4578899999999988899999999999999999999988754432221111 111 11122344467789999999
Q ss_pred hcccCCCCCCCHHHHHHH
Q 010932 297 CLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~ 314 (497)
||+.+|++|||+.+++++
T Consensus 236 ~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 236 MLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred HccCChhhCCCHHHHhhC
Confidence 999999999999999974
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-39 Score=311.07 Aligned_cols=251 Identities=21% Similarity=0.291 Sum_probs=199.2
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCc----EEEEEEccCCCCCC-hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNR----LVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
+..++.||+|+||.||+|.+. +|. .||+|.+....... ...+.+|+.+++.++||||+++++++... ..++++
T Consensus 9 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~ 87 (303)
T cd05110 9 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVT 87 (303)
T ss_pred ceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceeee
Confidence 356677899999999999864 344 57999887543322 34688999999999999999999998754 467999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC--
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK-- 215 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 215 (497)
||+++|+|.+++... ...+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||+++......
T Consensus 88 e~~~~g~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~ 165 (303)
T cd05110 88 QLMPHGCLLDYVHEH-KDNIGSQLLLNWCVQIAKGMMYLEERR-LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE 165 (303)
T ss_pred hhcCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHhhcC-eeccccccceeeecCCCceEEccccccccccCcccc
Confidence 999999999998652 446899999999999999999999999 9999999999999999999999999998543221
Q ss_pred ----ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHH
Q 010932 216 ----SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290 (497)
Q Consensus 216 ----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (497)
...++..|+|||.+.+..++.++|||||||++|||++ |+.|+......... ..+........+..++..+
T Consensus 166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 240 (303)
T cd05110 166 YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIP-----DLLEKGERLPQPPICTIDV 240 (303)
T ss_pred cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHCCCCCCCCCCCCHHH
Confidence 1234568999999998889999999999999999997 77776543222111 1111111112233456679
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHhhhhhccc
Q 010932 291 VELASKCLQYEAKDRPDVKFLLSAVAPLQKQT 322 (497)
Q Consensus 291 ~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~ 322 (497)
.+++.+||..+|++||++.++++.|..+....
T Consensus 241 ~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 241 YMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 99999999999999999999999999876443
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=302.06 Aligned_cols=245 Identities=23% Similarity=0.376 Sum_probs=199.4
Q ss_pred cccccCCCCCCcEEEEEEEcC-C----cEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 65 LIVSESGDKAPNVVYRGRLKN-N----RLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~~-~----~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
.+++.+|.|+||.||++.+.+ + ..||+|++...... ..+.+..|+.++..++|+||+++++++...+..+++||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 356778999999999999754 3 88999999765433 45689999999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC---
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--- 215 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 215 (497)
|+++++|.+++.......+++..+..++.|++.||.+||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~-~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (258)
T smart00219 82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN-FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYK 160 (258)
T ss_pred ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC-eeecccccceEEEccCCeEEEcccCCceecccccccc
Confidence 999999999986533333999999999999999999999999 9999999999999999999999999987654331
Q ss_pred --ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 216 --SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 216 --~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
...+++.|+|||.+.+..++.++||||||+++++|++ |..|+.......... .+........+...+..+.+
T Consensus 161 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 235 (258)
T smart00219 161 KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLE-----YLKKGYRLPKPENCPPEIYK 235 (258)
T ss_pred cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHhcCCCCCCCCcCCHHHHH
Confidence 1225678999999988889999999999999999999 565554322211111 11111122233446778999
Q ss_pred HHHHhcccCCCCCCCHHHHHHHh
Q 010932 293 LASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~l 315 (497)
++.+||..||++|||+.++++.|
T Consensus 236 ~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 236 LMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHHCcCChhhCcCHHHHHhhC
Confidence 99999999999999999999864
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=288.51 Aligned_cols=241 Identities=17% Similarity=0.140 Sum_probs=197.6
Q ss_pred ccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccC-CCCcceeeeeeeee----CCceEEEEEcCC
Q 010932 68 SESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAE----GDERLLVAQYMP 141 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~----~~~~~lv~e~~~ 141 (497)
..||-|-.|+|-.+.++ +|+.+|+|++..+ ....+|+++-=.. .|||||.+++++.. ...+.+|||.++
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~me 142 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECME 142 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeeccc
Confidence 45799999999999986 4999999999743 4577888876555 59999999999854 346789999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC---CCCCeeEcccCCccccCCC---C
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD---EDGDPRLSSFGLMKNSRDG---K 215 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfgla~~~~~~---~ 215 (497)
||.|.+.+..+....+++.++..|+.||+.|+.|||+.+ |.||||||+|+|.. .|..+||+|||+|+..... .
T Consensus 143 GGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n-IAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~ 221 (400)
T KOG0604|consen 143 GGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN-IAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLM 221 (400)
T ss_pred chHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc-hhhccCChhheeeecCCCCcceEecccccccccCCCcccc
Confidence 999999999877888999999999999999999999999 99999999999997 4567999999999976533 3
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccccccc--ccCCCCCHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDS--SLEGQYANEDATQLVEL 293 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l 293 (497)
+.+-||.|.|||++...+|+..+|+||+||++|-|++|.+||.......+..+-...+... .+..+-....++..+++
T Consensus 222 TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdl 301 (400)
T KOG0604|consen 222 TPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDL 301 (400)
T ss_pred CCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHH
Confidence 5677999999999999999999999999999999999999986542222211111111111 11222235678999999
Q ss_pred HHHhcccCCCCCCCHHHHHHH
Q 010932 294 ASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 294 i~~cl~~dp~~Rps~~~ll~~ 314 (497)
|+.+|..+|.+|.|+.+++.+
T Consensus 302 IR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 302 IRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred HHHHhcCCchhheeHHHhhcC
Confidence 999999999999999999986
|
|
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-39 Score=308.37 Aligned_cols=243 Identities=21% Similarity=0.270 Sum_probs=203.1
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC---CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW---PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
.+.+++.||.|+||.||++.+. +++.||+|++..... ...+.+.+|++++++++||||+++++++..+...++|||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME 81 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence 3567788899999999999976 489999999875432 234678899999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-Ccc
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-KSY 217 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~ 217 (497)
|+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+|||++.++.+||+|||++...... ...
T Consensus 82 ~~~~~~L~~~~~~--~~~l~~~~~~~~~~qil~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~ 158 (290)
T cd05580 82 YVPGGELFSHLRK--SGRFPEPVARFYAAQVVLALEYLHSLD-IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTL 158 (290)
T ss_pred cCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCC
Confidence 9999999999865 467999999999999999999999999 999999999999999999999999998865443 345
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHh
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKC 297 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 297 (497)
.+++.|+|||.+.+...+.++||||||+++|+|++|..|+........... .... ...++...+..+.+++.+|
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----~~~~--~~~~~~~~~~~l~~li~~~ 232 (290)
T cd05580 159 CGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEK----ILEG--KVRFPSFFSPDAKDLIRNL 232 (290)
T ss_pred CCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HhcC--CccCCccCCHHHHHHHHHH
Confidence 678999999999888889999999999999999999988754432111111 1111 1223444577899999999
Q ss_pred cccCCCCCC-----CHHHHHHH
Q 010932 298 LQYEAKDRP-----DVKFLLSA 314 (497)
Q Consensus 298 l~~dp~~Rp-----s~~~ll~~ 314 (497)
|+.||.+|| ++++++++
T Consensus 233 l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 233 LQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred ccCCHHHccCcccCCHHHHHcC
Confidence 999999999 78888875
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=304.04 Aligned_cols=249 Identities=21% Similarity=0.326 Sum_probs=199.9
Q ss_pred cccccccCCCCCCcEEEEEEEcC------CcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
.+.++..+|.|+||.||+|..+. ...|++|.+...... ..+.+.+|++++++++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 85 (275)
T cd05046 6 NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYM 85 (275)
T ss_pred hceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceE
Confidence 45677888999999999999642 467999998765433 24679999999999999999999999999889999
Q ss_pred EEEcCCCCChhhhhhcCCC-------CCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCc
Q 010932 136 VAQYMPNDTLSKHLFHWDK-------QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLM 208 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~-------~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 208 (497)
||||+++++|.+++..... ..+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++
T Consensus 86 v~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~~~~~~ 164 (275)
T cd05046 86 ILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR-FVHRDLAARNCLVSSQREVKVSLLSLS 164 (275)
T ss_pred EEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC-cccCcCccceEEEeCCCcEEEcccccc
Confidence 9999999999999965331 26899999999999999999999999 999999999999999999999999998
Q ss_pred cccCCC-----CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCC
Q 010932 209 KNSRDG-----KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282 (497)
Q Consensus 209 ~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (497)
...... ....++..|+|||.+.+...+.++||||||+++|+|++ |..||........... ..........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~----~~~~~~~~~~ 240 (275)
T cd05046 165 KDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNR----LQAGKLELPV 240 (275)
T ss_pred cccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHH----HHcCCcCCCC
Confidence 643221 22345677999999988888999999999999999999 5555533211111111 1111111122
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 010932 283 ANEDATQLVELASKCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 283 ~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~ 316 (497)
+...+..+.+++.+||+.+|.+|||+.+++..|.
T Consensus 241 ~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 241 PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 3446678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-39 Score=305.08 Aligned_cols=250 Identities=20% Similarity=0.265 Sum_probs=201.0
Q ss_pred cccccccCCCCCCcEEEEEEEcC----CcEEEEEEccCCC-CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN----NRLVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
.+.+.+.+|.|+||.||+|.+.+ ...|+||...... ....+.+.+|+.+++.++||||+++++++.+ ...++||
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~ 85 (270)
T cd05056 7 DITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVM 85 (270)
T ss_pred hceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEE
Confidence 34566778999999999998643 2479999987554 2235679999999999999999999998875 5678999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC--
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK-- 215 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 215 (497)
||+++++|.+++... ...+++..+..++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++......
T Consensus 86 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 163 (270)
T cd05056 86 ELAPLGELRSYLQVN-KYSLDLASLILYSYQLSTALAYLESKR-FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYY 163 (270)
T ss_pred EcCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccChheEEEecCCCeEEccCceeeecccccce
Confidence 999999999999652 346899999999999999999999999 9999999999999999999999999987543332
Q ss_pred ---ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHH
Q 010932 216 ---SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291 (497)
Q Consensus 216 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (497)
...++..|+|||.+....++.++|||||||++|+|++ |..||.......... .+........+..++..+.
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 238 (270)
T cd05056 164 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIG-----RIENGERLPMPPNCPPTLY 238 (270)
T ss_pred ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH-----HHHcCCcCCCCCCCCHHHH
Confidence 1223457999999988889999999999999999986 888775442221111 0111111223445677899
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 292 ELASKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
+++.+||..+|.+|||+.+++..|+.+..
T Consensus 239 ~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 239 SLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-39 Score=305.85 Aligned_cols=248 Identities=18% Similarity=0.265 Sum_probs=201.6
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
+.+++.+|.|++|.||++.++ +++.||+|++..... .....+.+|+++++.++||||+++++.+...+..++|+||++
T Consensus 3 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (265)
T cd06605 3 LEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMD 82 (265)
T ss_pred chHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecC
Confidence 456677899999999999986 489999999876543 234678999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--Cccc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNS-QNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KSYS 218 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~~ 218 (497)
+++|.+++... ...+++..+..++.|++.||.|||+ .+ ++|+||||+||+++.++.++|+|||.+...... ....
T Consensus 83 ~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~-i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 160 (265)
T cd06605 83 GGSLDKILKEV-QGRIPERILGKIAVAVLKGLTYLHEKHK-IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFV 160 (265)
T ss_pred CCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHcCCCC-eecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhccc
Confidence 99999998653 2688999999999999999999999 88 999999999999999999999999998754322 2256
Q ss_pred cCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhc-cccccccccccCCCCCHH-HHHHHHHHHHH
Q 010932 219 TNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRG-KNLLLLMDSSLEGQYANE-DATQLVELASK 296 (497)
Q Consensus 219 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~l~~li~~ 296 (497)
++..|+|||.+.+..++.++||||||+++|+|++|+.|+.......... ......... .....+.. .+..+.++|.+
T Consensus 161 ~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~ 239 (265)
T cd06605 161 GTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE-PPPRLPSGKFSPDFQDFVNL 239 (265)
T ss_pred CChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC-CCCCCChhhcCHHHHHHHHH
Confidence 7889999999998899999999999999999999998875431100000 000111111 11122222 67789999999
Q ss_pred hcccCCCCCCCHHHHHHH
Q 010932 297 CLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~ 314 (497)
||..||++|||+.+++.+
T Consensus 240 ~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 240 CLIKDPRERPSYKELLEH 257 (265)
T ss_pred HcCCCchhCcCHHHHhhC
Confidence 999999999999999875
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=310.06 Aligned_cols=247 Identities=17% Similarity=0.140 Sum_probs=197.8
Q ss_pred cccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCC---CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSW---PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
.+.+++.+|+|+||.||++.+.. ++.|+||.+..... ...+.+.+|+.+++.++||||+++++.+..++..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 34677888999999999999864 88999999875432 224568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC-----
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----- 213 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 213 (497)
|++|++|.+++.. .+.+++..+..++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++....
T Consensus 82 ~~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~ 158 (305)
T cd05609 82 YVEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLHNYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN 158 (305)
T ss_pred cCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence 9999999999965 457899999999999999999999999 99999999999999999999999998863110
Q ss_pred --------------CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccC
Q 010932 214 --------------GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLE 279 (497)
Q Consensus 214 --------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (497)
.....++..|+|||.+.+..++.++|||||||++|||++|..||.................. .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~---~ 235 (305)
T cd05609 159 LYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE---W 235 (305)
T ss_pred ccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC---C
Confidence 01234677899999998888999999999999999999999988654332222111111000 0
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010932 280 GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 280 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l 315 (497)
.......+..+.+++.+||+.||++|||+.++++.|
T Consensus 236 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll 271 (305)
T cd05609 236 PEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVK 271 (305)
T ss_pred CCccccCCHHHHHHHHHHhccChhhccCccCHHHHH
Confidence 111124567799999999999999999854444443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=302.83 Aligned_cols=252 Identities=16% Similarity=0.168 Sum_probs=197.5
Q ss_pred HHHHHHhcCCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccC-CCCcceeeeeeeee
Q 010932 52 ADLRAATNGFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAE 129 (497)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 129 (497)
.++....++|...+.++ +|.|+||.||++..+ ++..+|+|++........ |+.....+ +||||+++++.+..
T Consensus 7 ~~~~~~~~~~~~~~~~~-lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 7 SELVQFLKNCEIVKKLK-LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HHHHHHHHhhcccccee-ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEec
Confidence 34444445554444443 699999999999975 588999999875432221 22222222 69999999999999
Q ss_pred CCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC-CeeEcccCCc
Q 010932 130 GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG-DPRLSSFGLM 208 (497)
Q Consensus 130 ~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla 208 (497)
.+..++||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++ .++|+|||++
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~l~dfg~~ 157 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKK--EGKLSEAEVKKIIRQLVEALNDLHKHN-IIHNDIKLENVLYDRAKDRIYLCDYGLC 157 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence 9999999999999999999965 348999999999999999999999999 99999999999999888 9999999999
Q ss_pred cccCCCCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHH
Q 010932 209 KNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288 (497)
Q Consensus 209 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (497)
..........++..|+|||++.+..++.++|||||||++|+|++|+.|+.................. .....+...+.
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 235 (267)
T PHA03390 158 KIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQ--KKLPFIKNVSK 235 (267)
T ss_pred eecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhc--ccCCcccccCH
Confidence 8776666677899999999999888999999999999999999999887543222111111111111 11123345778
Q ss_pred HHHHHHHHhcccCCCCCCC-HHHHHHH
Q 010932 289 QLVELASKCLQYEAKDRPD-VKFLLSA 314 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps-~~~ll~~ 314 (497)
.+.+++.+||+.+|.+||+ +++++++
T Consensus 236 ~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 236 NANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred HHHHHHHHHhccChhhCCchHHHHhcC
Confidence 8999999999999999995 6998864
|
|
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=305.11 Aligned_cols=257 Identities=15% Similarity=0.188 Sum_probs=198.9
Q ss_pred HHHHHHHhcCCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccC-CCCcceeeeeeee
Q 010932 51 LADLRAATNGFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCA 128 (497)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 128 (497)
++.+....++| .+++.||+|+||.||++... +++.+|+|++.... .....+.+|+.+++.+ +||||+++++++.
T Consensus 10 ~~~~~~~~~~~---~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 85 (286)
T cd06638 10 FDSFPDPSDTW---EIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYY 85 (286)
T ss_pred eecCCCcccce---eeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence 33443444444 67788899999999999975 48899999986532 2245688999999999 6999999999874
Q ss_pred -----eCCceEEEEEcCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCee
Q 010932 129 -----EGDERLLVAQYMPNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201 (497)
Q Consensus 129 -----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~k 201 (497)
.++..++||||+++++|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~~k 164 (286)
T cd06638 86 KKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK-TIHRDVKGNNILLTTEGGVK 164 (286)
T ss_pred ecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC-ccccCCCHHhEEECCCCCEE
Confidence 345689999999999999987532 2457899999999999999999999999 99999999999999999999
Q ss_pred EcccCCccccCCC----CccccCCCCCCcccccc-----CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccc
Q 010932 202 LSSFGLMKNSRDG----KSYSTNLAYTPPEFLRT-----GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLL 272 (497)
Q Consensus 202 l~Dfgla~~~~~~----~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~ 272 (497)
|+|||+++..... ....|++.|+|||++.. ..++.++|||||||++|+|++|+.|+.......... ....
T Consensus 165 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~-~~~~ 243 (286)
T cd06638 165 LVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALF-KIPR 243 (286)
T ss_pred EccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHh-hccc
Confidence 9999998754332 23457899999999853 457889999999999999999998875432111100 0000
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010932 273 LMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 273 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l 315 (497)
.... ....+...+..+.+|+.+||+.||++|||+.+|+++.
T Consensus 244 ~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 244 NPPP--TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred cCCC--cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 0000 1111233456799999999999999999999999864
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=302.99 Aligned_cols=243 Identities=19% Similarity=0.200 Sum_probs=195.8
Q ss_pred ccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCC--C---ChhHHHHHHHHhccCCCCcceeeeeeeeeC--CceEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSW--P---DPHQFVTEAAGLGNVRHKRLVNLIGCCAEG--DERLL 135 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~--~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 135 (497)
+.+.+.+|+|+||.||++...+ |..||||++..... . ..+.+.+|+.++++++||||+++++++.+. ...++
T Consensus 4 ~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (265)
T cd06652 4 WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSI 83 (265)
T ss_pred ceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEE
Confidence 4556778999999999999754 89999998853221 1 134688899999999999999999988764 45789
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC--
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD-- 213 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 213 (497)
||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 84 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~ 160 (265)
T cd06652 84 FMEHMPGGSIKDQLKS--YGALTENVTRKYTRQILEGVSYLHSNM-IVHRDIKGANILRDSVGNVKLGDFGASKRLQTIC 160 (265)
T ss_pred EEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEecCCCCEEECcCcccccccccc
Confidence 9999999999999865 356889999999999999999999999 99999999999999999999999999875432
Q ss_pred -----CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHH
Q 010932 214 -----GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288 (497)
Q Consensus 214 -----~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (497)
.....++..|+|||++.+..++.++|||||||++|+|++|+.||......... ............+...+.
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 236 (265)
T cd06652 161 LSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAI----FKIATQPTNPVLPPHVSD 236 (265)
T ss_pred ccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHH----HHHhcCCCCCCCchhhCH
Confidence 12345788999999998888999999999999999999999887543211111 111111122334556677
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+.+++.+||. +|++|||+++++++
T Consensus 237 ~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 237 HCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred HHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 89999999995 99999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=311.39 Aligned_cols=243 Identities=17% Similarity=0.224 Sum_probs=183.3
Q ss_pred ccCCCCCCcEEEEEEEcC---CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeee--CCceEEEEEcCCC
Q 010932 68 SESGDKAPNVVYRGRLKN---NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE--GDERLLVAQYMPN 142 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~ 142 (497)
.+||+|+||+||+|..++ +..||+|.+.... ....+.+|+.+|+.++||||+++++++.. +...++|+||+.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE- 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-
Confidence 357999999999999753 5789999987543 23468899999999999999999998854 456899999986
Q ss_pred CChhhhhhcC-------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEe----CCCCCeeEcccCCcccc
Q 010932 143 DTLSKHLFHW-------DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF----DEDGDPRLSSFGLMKNS 211 (497)
Q Consensus 143 ~~L~~~l~~~-------~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfgla~~~ 211 (497)
++|.+++... ....+++..+..++.||+.||.|||+.+ ++||||||+|||+ +.++.+||+|||+++..
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07867 84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEccCCCCCCcEEEeeccceecc
Confidence 4677766421 1235889999999999999999999999 9999999999999 56789999999999754
Q ss_pred CCC-------CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc---------------
Q 010932 212 RDG-------KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK--------------- 268 (497)
Q Consensus 212 ~~~-------~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~--------------- 268 (497)
... ....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||.....+.....
T Consensus 163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T cd07867 163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMG 242 (317)
T ss_pred CCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcC
Confidence 332 23467889999999976 4579999999999999999999988743211100000
Q ss_pred -----ccc---------cccccccCC------------CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 269 -----NLL---------LLMDSSLEG------------QYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 269 -----~~~---------~~~~~~~~~------------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
... ......... .........+.+|+.+||+.||.+|||+.+++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h 314 (317)
T cd07867 243 FPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD 314 (317)
T ss_pred CCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence 000 000000000 0001123458899999999999999999999974
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=307.50 Aligned_cols=246 Identities=22% Similarity=0.238 Sum_probs=199.3
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC---hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
.+.+++.+|+|+||.||+|... +|+.||+|++....... .+.+.+|+.+++.++||||+++++++.+.+..++|+|
T Consensus 16 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e 95 (307)
T cd06607 16 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVME 95 (307)
T ss_pred hhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHH
Confidence 4566778899999999999975 58999999986543322 3468899999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCccc
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYS 218 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 218 (497)
|++ |+|.+++... ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..........
T Consensus 96 ~~~-g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH~~~-i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~ 172 (307)
T cd06607 96 YCL-GSASDILEVH-KKPLQEVEIAAICHGALQGLAYLHSHE-RIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFV 172 (307)
T ss_pred hhC-CCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEECCCCCEEEeecCcceecCCCCCcc
Confidence 996 5676766432 457999999999999999999999999 9999999999999999999999999998776666677
Q ss_pred cCCCCCCccccc---cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 219 TNLAYTPPEFLR---TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 219 gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
+++.|+|||++. ...++.++||||||+++|+|+||..|+........... ..........+..++..+.+++.
T Consensus 173 ~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~ 248 (307)
T cd06607 173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH----IAQNDSPTLSSNDWSDYFRNFVD 248 (307)
T ss_pred CCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHH----HhcCCCCCCCchhhCHHHHHHHH
Confidence 889999999884 35688999999999999999999987754322111100 00000011112346678999999
Q ss_pred HhcccCCCCCCCHHHHHHHh
Q 010932 296 KCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~l 315 (497)
+||+.+|++|||+.+++.+.
T Consensus 249 ~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 249 SCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred HHhcCChhhCcCHHHHhcCh
Confidence 99999999999999999863
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=306.35 Aligned_cols=246 Identities=17% Similarity=0.252 Sum_probs=196.0
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccC-CCCcceeeeeeeee------CCceE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAE------GDERL 134 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~------~~~~~ 134 (497)
.+.+++.+|.|+||.||+|.+. +++.||+|++.... .....+..|+.+++++ +||||+++++++.. ....+
T Consensus 17 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 95 (282)
T cd06636 17 IFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLW 95 (282)
T ss_pred hhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEE
Confidence 3456677899999999999975 48999999986543 2345688999999998 69999999999853 45789
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC-
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD- 213 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~- 213 (497)
++|||+++++|.+++.......+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 96 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~ 174 (282)
T cd06636 96 LVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 174 (282)
T ss_pred EEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCcchhhhhcc
Confidence 9999999999999997655567899999999999999999999999 99999999999999999999999999875432
Q ss_pred ---CCccccCCCCCCccccc-----cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHH
Q 010932 214 ---GKSYSTNLAYTPPEFLR-----TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANE 285 (497)
Q Consensus 214 ---~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (497)
.....+++.|+|||.+. ...++.++|||||||++|+|++|..||........ ................
T Consensus 175 ~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~ 250 (282)
T cd06636 175 VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA----LFLIPRNPPPKLKSKK 250 (282)
T ss_pred ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh----hhhHhhCCCCCCcccc
Confidence 23456788999999986 34678899999999999999999988743321110 0111111111111234
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 286 DATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 286 ~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
++..+.+|+.+||+.||.+|||+.+|+++
T Consensus 251 ~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 251 WSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred cCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 56789999999999999999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-39 Score=308.60 Aligned_cols=249 Identities=21% Similarity=0.301 Sum_probs=196.8
Q ss_pred cccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
.+.+++.+|.|+||.||+|.+++ ++.||+|++...... ..+.+.+|+++++.++||||+++++++..+...++|+||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence 35677889999999999999864 899999998654322 245788999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----C
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----K 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 215 (497)
+++++|..+... ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 82 ~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07846 82 VDHTVLDDLEKY--PNGLDESRVRKYLFQILRGIEFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYT 158 (286)
T ss_pred CCccHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccC
Confidence 999999887654 446899999999999999999999999 999999999999999999999999998754332 2
Q ss_pred ccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc------cc----------ccccc---
Q 010932 216 SYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK------NL----------LLLMD--- 275 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~------~~----------~~~~~--- 275 (497)
...++..|+|||++.+ ..++.++|||||||++|+|++|+.||+.......... .. ..+..
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07846 159 DYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMR 238 (286)
T ss_pred cccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccc
Confidence 2456788999999875 4478899999999999999999977754321100000 00 00000
Q ss_pred -cccC-----CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 276 -SSLE-----GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 276 -~~~~-----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+... ....+..+..+.+|+.+||+.+|++|||+.+++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 239 LPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred cccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 0000 00112356789999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-39 Score=308.51 Aligned_cols=248 Identities=19% Similarity=0.237 Sum_probs=193.6
Q ss_pred cccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCC-CCcceeeeeeeeeCCceEEEEEcCC
Q 010932 65 LIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
..++.||+|+||.||++... +|+.||||.+...... ....+.+|+.++.++. ||||+++++++..+...+++|||+.
T Consensus 7 ~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~ 86 (288)
T cd06616 7 KDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMD 86 (288)
T ss_pred HHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEeccc
Confidence 44567899999999999976 4899999998754322 3457889999999996 9999999999999889999999985
Q ss_pred CCChhhh---hhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCcccccCCCcceEeCCCCCeeEcccCCccccCCC---
Q 010932 142 NDTLSKH---LFHWDKQPLPWEMRVRVAYYIAQALDHCNSQ-NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--- 214 (497)
Q Consensus 142 ~~~L~~~---l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 214 (497)
++|.++ +.......+++..+..++.+++.||.|||+. + ++||||||+||+++.++.++|+|||+++.....
T Consensus 87 -~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 164 (288)
T cd06616 87 -ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK-IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAK 164 (288)
T ss_pred -CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC-eeccCCCHHHEEEccCCcEEEeecchhHHhccCCcc
Confidence 455443 2222346799999999999999999999975 7 999999999999999999999999998754322
Q ss_pred CccccCCCCCCccccccC---CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHH
Q 010932 215 KSYSTNLAYTPPEFLRTG---RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~~---~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (497)
....+++.|+|||++.+. .++.++|||||||++|+|++|+.||..................+......+...+..+.
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 244 (288)
T cd06616 165 TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFV 244 (288)
T ss_pred ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHH
Confidence 234678899999999866 68999999999999999999998875432111000000000111122222234677899
Q ss_pred HHHHHhcccCCCCCCCHHHHHHH
Q 010932 292 ELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+|+.+||+.||++|||+.+|+.+
T Consensus 245 ~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 245 NFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred HHHHHHccCChhhCcCHHHHhcC
Confidence 99999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-39 Score=309.25 Aligned_cols=248 Identities=19% Similarity=0.216 Sum_probs=194.2
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
+.+++.||.|+||.||+|... +|+.||+|+++..... ....+.+|+.++++++||||+++++++.+....++|+||+
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC 81 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence 456778899999999999976 5899999998754222 2356788999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----Cc
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KS 216 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 216 (497)
+ ++|.+++... ...+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||+++..... ..
T Consensus 82 ~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (284)
T cd07839 82 D-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSHN-VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSA 158 (284)
T ss_pred C-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCC
Confidence 6 5787777542 457999999999999999999999999 999999999999999999999999998754332 22
Q ss_pred cccCCCCCCccccccCC-CCcccceeehhhhHHHHhhCCCCCCchhhHHHhccc---------------cccccccccC-
Q 010932 217 YSTNLAYTPPEFLRTGR-VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKN---------------LLLLMDSSLE- 279 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~---------------~~~~~~~~~~- 279 (497)
..+++.|+|||++.+.. ++.++|||||||++|+|+||+.|+............ .....+....
T Consensus 159 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd07839 159 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYP 238 (284)
T ss_pred CccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccC
Confidence 35678999999987644 689999999999999999999875332111000000 0000000000
Q ss_pred --------CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 280 --------GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 280 --------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
....+..++.+.+++.+||+.||.+|||+++++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 239 MYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred CCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 01112356789999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=302.78 Aligned_cols=242 Identities=19% Similarity=0.239 Sum_probs=194.0
Q ss_pred cccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-----ChhHHHHHHHHhccCCCCcceeeeeeeeeC--CceEEE
Q 010932 65 LIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-----DPHQFVTEAAGLGNVRHKRLVNLIGCCAEG--DERLLV 136 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv 136 (497)
.+.+.+|+|+||.||++... +|..|++|++...... ....+.+|+.+++.++||||+++++++... ...+++
T Consensus 5 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~ 84 (266)
T cd06651 5 RRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIF 84 (266)
T ss_pred cccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEE
Confidence 44566699999999999975 4899999998643221 134688999999999999999999988753 567899
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 214 (497)
+||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++.....
T Consensus 85 ~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~-i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd06651 85 MEYMPGGSVKDQLKA--YGALTESVTRKYTRQILEGMSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM 161 (266)
T ss_pred EeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence 999999999999865 456899999999999999999999999 999999999999999999999999998754321
Q ss_pred -----CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHH
Q 010932 215 -----KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQ 289 (497)
Q Consensus 215 -----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (497)
....++..|+|||++.+..++.++|||||||++|+|++|+.||........ ............++...++.
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 237 (266)
T cd06651 162 SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAA----IFKIATQPTNPQLPSHISEH 237 (266)
T ss_pred cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHH----HHHHhcCCCCCCCchhcCHH
Confidence 124577899999999988899999999999999999999988753321111 11111111223445556677
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 290 LVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 290 l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+.+++ +||..+|++|||+++|+++
T Consensus 238 ~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 238 ARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred HHHHH-HHhcCChhhCcCHHHHhcC
Confidence 88888 6888999999999999874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=306.04 Aligned_cols=249 Identities=22% Similarity=0.308 Sum_probs=194.3
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
+.+.+++.+|.|++|.||+|..+ +++.||||.+...... ....+.+|+++++.++||||+++++++......++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 45678888999999999999976 5899999998754322 234678899999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----C
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----K 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 215 (497)
+.+ +|.+++... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++..... .
T Consensus 85 ~~~-~L~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 161 (291)
T cd07844 85 LDT-DLKQYMDDC-GGGLSMHNVRLFLFQLLRGLAYCHQRR-VLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYS 161 (291)
T ss_pred CCC-CHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCHHHEEEcCCCCEEECccccccccCCCCcccc
Confidence 974 899888653 347899999999999999999999999 999999999999999999999999998753321 2
Q ss_pred ccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhh--HHHhc----------ccccc------cc--
Q 010932 216 SYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHAL--DVIRG----------KNLLL------LM-- 274 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~--~~~~~----------~~~~~------~~-- 274 (497)
...++..|+|||++.+ ..++.++|||||||++|+|++|+.||..... +.... ..... ..
T Consensus 162 ~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (291)
T cd07844 162 NEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPY 241 (291)
T ss_pred ccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccc
Confidence 2345788999999875 4578999999999999999999988754321 00000 00000 00
Q ss_pred ------ccccCCCCCHHHH--HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 275 ------DSSLEGQYANEDA--TQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 275 ------~~~~~~~~~~~~~--~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
....... ..... ..+.+++.+||+.+|++|||+.+++.+
T Consensus 242 ~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 242 SFPFYPPRPLINH-APRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred cccccCChhHHHh-CcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 0000000 00112 678899999999999999999999864
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=301.64 Aligned_cols=242 Identities=21% Similarity=0.244 Sum_probs=199.2
Q ss_pred ccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC-----CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 66 IVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW-----PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 66 ~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
+.+.+|+|++|+||+|... ++..|++|.+..... ...+.+.+|+.+++.++|+||+++++++..+...++|+||
T Consensus 4 ~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 83 (258)
T cd06632 4 KGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLEL 83 (258)
T ss_pred ccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEe
Confidence 4456799999999999976 689999999865432 1245789999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---Cc
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---KS 216 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~ 216 (497)
+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...... ..
T Consensus 84 ~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~ 160 (258)
T cd06632 84 VPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHDRN-TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKS 160 (258)
T ss_pred cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccceeccccccccc
Confidence 999999999865 456899999999999999999999999 999999999999999999999999998754332 34
Q ss_pred cccCCCCCCccccccCC-CCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGR-VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
..+++.|++||.+.... ++.++|+|||||++|+|++|+.||......... ............+...++.+.+++.
T Consensus 161 ~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~li~ 236 (258)
T cd06632 161 FKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAV----FKIGRSKELPPIPDHLSDEAKDFIL 236 (258)
T ss_pred cCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHH----HHHHhcccCCCcCCCcCHHHHHHHH
Confidence 56788999999998766 899999999999999999999887543211110 1111101122344456788999999
Q ss_pred HhcccCCCCCCCHHHHHHH
Q 010932 296 KCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~ 314 (497)
+||+.+|++|||+.+++.+
T Consensus 237 ~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 237 KCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred HHhhcCcccCcCHHHHhcC
Confidence 9999999999999999874
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=301.73 Aligned_cols=245 Identities=18% Similarity=0.256 Sum_probs=202.1
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeee--CCceEEEEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAE--GDERLLVAQ 138 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e 138 (497)
|.+++.+|.|+||.||++... +|..||+|++....... .+.+..|+++++.++||||+++++++.. +...+++||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e 81 (265)
T cd08217 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME 81 (265)
T ss_pred ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence 567788899999999999965 58899999987543322 4568899999999999999999998754 456799999
Q ss_pred cCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHH-----cCCCcccccCCCcceEeCCCCCeeEcccCCcccc
Q 010932 139 YMPNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCN-----SQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS 211 (497)
Q Consensus 139 ~~~~~~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lh-----~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 211 (497)
|+++++|.+++... ....+++..+..++.+|+.||.||| +.+ ++|+||||+||+++.++.+||+|||++...
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~-i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 82 YCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT-VLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc-ceecCCCHHHEEEecCCCEEEecccccccc
Confidence 99999999998643 2467999999999999999999999 888 999999999999999999999999998865
Q ss_pred CCCC----ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHH
Q 010932 212 RDGK----SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287 (497)
Q Consensus 212 ~~~~----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (497)
.... ...+++.|+|||.+.+..++.++||||||+++|+|++|..|+......... ..+........+...+
T Consensus 161 ~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 235 (265)
T cd08217 161 GHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLA-----SKIKEGKFRRIPYRYS 235 (265)
T ss_pred cCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHH-----HHHhcCCCCCCccccC
Confidence 4432 346788999999999888999999999999999999999887554322211 1111222233455667
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 288 TQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 288 ~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..+.+++.+||+.+|++|||+.+|+++
T Consensus 236 ~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 236 SELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 889999999999999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=308.32 Aligned_cols=240 Identities=18% Similarity=0.237 Sum_probs=197.1
Q ss_pred ccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCChh
Q 010932 68 SESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLS 146 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 146 (497)
..||.|+||.||++... ++..||||.+........+.+.+|+.+++.++||||+++++.+..++..++||||+++++|.
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALT 107 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHH
Confidence 44699999999999975 58899999987655444567899999999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----CccccCCC
Q 010932 147 KHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KSYSTNLA 222 (497)
Q Consensus 147 ~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~gt~~ 222 (497)
+++. .+.+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....++..
T Consensus 108 ~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~ 183 (292)
T cd06658 108 DIVT---HTRMNEEQIATVCLSVLRALSYLHNQG-VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPY 183 (292)
T ss_pred HHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCcc
Confidence 9884 346899999999999999999999999 999999999999999999999999998643322 23467889
Q ss_pred CCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCC
Q 010932 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302 (497)
Q Consensus 223 y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 302 (497)
|+|||.+.+..++.++|||||||++|||++|+.|+.......... .+......... .....+..+.+++.+||..||
T Consensus 184 y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~P 260 (292)
T cd06658 184 WMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMR-RIRDNLPPRVK--DSHKVSSVLRGFLDLMLVREP 260 (292)
T ss_pred ccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhcCCCccc--cccccCHHHHHHHHHHccCCh
Confidence 999999988889999999999999999999998875432211100 01111111111 122346679999999999999
Q ss_pred CCCCCHHHHHHH
Q 010932 303 KDRPDVKFLLSA 314 (497)
Q Consensus 303 ~~Rps~~~ll~~ 314 (497)
.+|||+.+++++
T Consensus 261 ~~Rpt~~~il~~ 272 (292)
T cd06658 261 SQRATAQELLQH 272 (292)
T ss_pred hHCcCHHHHhhC
Confidence 999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-39 Score=303.26 Aligned_cols=244 Identities=20% Similarity=0.216 Sum_probs=202.5
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC---CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW---PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
+.+++.+|.|+||.||++... ++..||+|++..... ...+.+.+|++++++++||||+++++.+..+...++|+||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDL 81 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeC
Confidence 467788899999999999976 489999999975432 2356799999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---Cc
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---KS 216 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~ 216 (497)
+.+++|..++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 82 ~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 158 (258)
T cd05578 82 LLGGDLRYHLSQ--KVKFSEEQVKFWICEIVLALEYLHSKG-IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTS 158 (258)
T ss_pred CCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEEcCCCCEEEeecccccccCCCccccc
Confidence 999999999865 358999999999999999999999999 999999999999999999999999998765443 23
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
..++..|+|||.+.+..++.++||||||+++|+|++|..|+....... .......... .....+...+..+.+++.+
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~ 235 (258)
T cd05578 159 TSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI--RDQIRAKQET-ADVLYPATWSTEAIDAINK 235 (258)
T ss_pred cCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH--HHHHHHHhcc-ccccCcccCcHHHHHHHHH
Confidence 457788999999998889999999999999999999999876543210 0000111110 2233455567889999999
Q ss_pred hcccCCCCCCCH--HHHHH
Q 010932 297 CLQYEAKDRPDV--KFLLS 313 (497)
Q Consensus 297 cl~~dp~~Rps~--~~ll~ 313 (497)
||+.||.+||++ .++++
T Consensus 236 ~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 236 LLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred HccCChhHcCCccHHHHhc
Confidence 999999999999 76664
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=308.11 Aligned_cols=241 Identities=20% Similarity=0.241 Sum_probs=198.1
Q ss_pred cccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCCh
Q 010932 67 VSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTL 145 (497)
Q Consensus 67 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 145 (497)
...+|.|+||.||++... +++.||||++........+.+.+|+.++..++||||+++++++..++..++|+||+++++|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 346799999999999975 5899999999765545567789999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----CccccCC
Q 010932 146 SKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KSYSTNL 221 (497)
Q Consensus 146 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~gt~ 221 (497)
..++. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ....++.
T Consensus 106 ~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~ 181 (297)
T cd06659 106 TDIVS---QTRLNEEQIATVCESVLQALCYLHSQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTP 181 (297)
T ss_pred HHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCc
Confidence 99874 356899999999999999999999999 999999999999999999999999998654322 2356788
Q ss_pred CCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccC
Q 010932 222 AYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYE 301 (497)
Q Consensus 222 ~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 301 (497)
.|+|||++.+..++.++|||||||++|||++|+.||.......... .+...... ........+..+.+++.+||+.+
T Consensus 182 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~l~~~i~~~l~~~ 258 (297)
T cd06659 182 YWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK-RLRDSPPP--KLKNAHKISPVLRDFLERMLTRE 258 (297)
T ss_pred cccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHhccCCC--CccccCCCCHHHHHHHHHHhcCC
Confidence 9999999998889999999999999999999998875332111100 00000000 11112234567899999999999
Q ss_pred CCCCCCHHHHHHH
Q 010932 302 AKDRPDVKFLLSA 314 (497)
Q Consensus 302 p~~Rps~~~ll~~ 314 (497)
|++|||+.+++++
T Consensus 259 P~~Rps~~~ll~~ 271 (297)
T cd06659 259 PQERATAQELLDH 271 (297)
T ss_pred cccCcCHHHHhhC
Confidence 9999999999996
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-38 Score=299.74 Aligned_cols=244 Identities=19% Similarity=0.242 Sum_probs=199.6
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
|.+.+.||.|+||.||++... +++.|++|+++..... ..+.+.+|+.+++.++|+||+++++++...+..++|+||+
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC 81 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence 456678899999999999975 5899999999765443 4568999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-----
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK----- 215 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 215 (497)
++++|.+++.. ...+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.......
T Consensus 82 ~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~ 158 (264)
T cd06626 82 SGGTLEELLEH--GRILDEHVIRVYTLQLLEGLAYLHSHG-IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGE 158 (264)
T ss_pred CCCcHHHHHhh--cCCCChHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccc
Confidence 99999999865 456899999999999999999999999 9999999999999999999999999987644321
Q ss_pred ---ccccCCCCCCccccccCC---CCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCH--HHH
Q 010932 216 ---SYSTNLAYTPPEFLRTGR---VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYAN--EDA 287 (497)
Q Consensus 216 ---~~~gt~~y~aPE~~~~~~---~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 287 (497)
...+++.|+|||++.+.. .+.++||||||+++|+|++|+.||............... ......+. ..+
T Consensus 159 ~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 234 (264)
T cd06626 159 EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA----GHKPPIPDSLQLS 234 (264)
T ss_pred cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc----CCCCCCCcccccC
Confidence 235678999999998766 889999999999999999999887543111100000000 11112222 236
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 288 TQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 288 ~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..+.+++.+||+.+|.+|||+.+++.+
T Consensus 235 ~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 235 PEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 778999999999999999999998864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=307.26 Aligned_cols=246 Identities=20% Similarity=0.277 Sum_probs=203.2
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
...+.+++.+|+|+||+||++... ++..||+|.+........+.+.+|+.+++.++||||+++++.+...+..++|+||
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 356678888999999999999864 5889999998755544567789999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----C
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----K 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 215 (497)
+++++|.+++.. ..+++..+..++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... .
T Consensus 98 ~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~g-i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~ 173 (293)
T cd06647 98 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 173 (293)
T ss_pred CCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC-EeeccCCHHHEEEcCCCCEEEccCcceecccccccccc
Confidence 999999999853 46889999999999999999999999 999999999999999999999999987654332 2
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccc-cccccCCCCCHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLL-MDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li 294 (497)
...+++.|+|||.+.+..++.++|||||||++|+|++|+.||........ .... .........+...+..+.+++
T Consensus 174 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li 249 (293)
T cd06647 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA----LYLIATNGTPELQNPEKLSAIFRDFL 249 (293)
T ss_pred cccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh----eeehhcCCCCCCCCccccCHHHHHHH
Confidence 34577889999999888899999999999999999999988754322111 0111 011111112334566799999
Q ss_pred HHhcccCCCCCCCHHHHHHH
Q 010932 295 SKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 295 ~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+||+.+|++||++.+++.+
T Consensus 250 ~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 250 NRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred HHHccCChhhCcCHHHHhcC
Confidence 99999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-38 Score=303.25 Aligned_cols=250 Identities=17% Similarity=0.243 Sum_probs=198.0
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeC--CceEEEEEc
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEG--DERLLVAQY 139 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~ 139 (497)
+..++++|.|++|.||++... +++.||+|.+...... ....+.+|+++++.++||||+++++++... ...++||||
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 82 (287)
T cd06621 3 IVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEY 82 (287)
T ss_pred eEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEe
Confidence 456778899999999999985 4899999998754332 346799999999999999999999988653 468999999
Q ss_pred CCCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--C
Q 010932 140 MPNDTLSKHLFH--WDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--K 215 (497)
Q Consensus 140 ~~~~~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~ 215 (497)
+++++|.+++.. .....+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 83 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 161 (287)
T cd06621 83 CEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK-IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAG 161 (287)
T ss_pred cCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecCCeEEEeeccccccccccccc
Confidence 999999887653 22456899999999999999999999999 999999999999999999999999998754332 2
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccc-ccc---cccCCCCC--HHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLL-LMD---SSLEGQYA--NEDATQ 289 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~--~~~~~~ 289 (497)
...++..|+|||.+.+..++.++|||||||++|+|++|..|+............... ... ........ ...++.
T Consensus 162 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (287)
T cd06621 162 TFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEE 241 (287)
T ss_pred cccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHH
Confidence 345688999999999889999999999999999999999887543110000000000 000 01111111 235678
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 290 LVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 290 l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+.+|+.+||+.+|.+|||+.+++++
T Consensus 242 ~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 242 FKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred HHHHHHHHcCCCcccCCCHHHHHhC
Confidence 9999999999999999999999985
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=305.42 Aligned_cols=248 Identities=19% Similarity=0.278 Sum_probs=197.6
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
+.+.+.+|.|+||.||+|.+. +|..||||++..... .....+.+|+.++++++||||+++++++..+...++|+||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM 81 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence 567788999999999999975 589999999876542 22467999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-----
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK----- 215 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 215 (497)
+++|.+++... ...+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 -~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (286)
T cd07832 82 -PSDLSEVLRDE-ERPLPEAQVKSYMRMLLKGVAYMHANG-IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYS 158 (286)
T ss_pred -CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccc
Confidence 99999998653 367999999999999999999999999 9999999999999999999999999988654332
Q ss_pred ccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc--------------------ccc
Q 010932 216 SYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL--------------------LLM 274 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~--------------------~~~ 274 (497)
...++..|+|||.+.+. .++.++|||||||++|+|++|..++.............. ...
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07832 159 HQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKIT 238 (286)
T ss_pred cccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhccc
Confidence 34578899999998754 468999999999999999999766543321100000000 000
Q ss_pred cccc----CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 275 DSSL----EGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 275 ~~~~----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.... .....+..+..+.+++.+||+.||++|||+++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 239 FPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred CCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000 000112345789999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-38 Score=307.69 Aligned_cols=249 Identities=22% Similarity=0.250 Sum_probs=201.7
Q ss_pred cccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC---hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 65 LIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
..++.+|+|+||.||++... +|..||+|++....... ...+.+|+++++.++|||++++++++..+...++||||+
T Consensus 28 ~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 107 (317)
T cd06635 28 TDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYC 107 (317)
T ss_pred hhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCC
Confidence 45667899999999999975 58999999987543222 346889999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCccccC
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN 220 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~gt 220 (497)
.| +|.+.+... ...+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..........++
T Consensus 108 ~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~-i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 184 (317)
T cd06635 108 LG-SASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGT 184 (317)
T ss_pred CC-CHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcccEEECCCCCEEEecCCCccccCCcccccCC
Confidence 74 777766442 556899999999999999999999999 999999999999999999999999998876666667788
Q ss_pred CCCCCccccc---cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHh
Q 010932 221 LAYTPPEFLR---TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKC 297 (497)
Q Consensus 221 ~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 297 (497)
+.|+|||++. .+.++.++|||||||++|+|++|+.||.......... .+.............+..+.+|+.+|
T Consensus 185 ~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~~ 260 (317)
T cd06635 185 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY----HIAQNESPTLQSNEWSDYFRNFVDSC 260 (317)
T ss_pred ccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHH----HHHhccCCCCCCccccHHHHHHHHHH
Confidence 9999999984 4568999999999999999999998875432111111 11111111112234567799999999
Q ss_pred cccCCCCCCCHHHHHHHhhhhhc
Q 010932 298 LQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 298 l~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
|+.+|.+|||+.+++++...+..
T Consensus 261 l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 261 LQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred ccCCcccCcCHHHHHhChhhhcc
Confidence 99999999999999998666543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=302.60 Aligned_cols=242 Identities=19% Similarity=0.261 Sum_probs=199.9
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
+.+++.+|.|+||.||+|... ++..||||++..... .....+.+|+.++++++||||+++++++..+...++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 356677899999999999875 589999999864432 224578899999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----Ccc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KSY 217 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 217 (497)
+++|..++. ...+++..+..++.+++.||.+||+.+ ++|+||+|+||+++.++.++|+|||++...... ...
T Consensus 86 ~~~l~~~i~---~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06641 86 GGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred CCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHccCC-eecCCCCHHhEEECCCCCEEEeecccceecccchhhhccc
Confidence 999999885 357899999999999999999999999 999999999999999999999999998754432 224
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHh
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKC 297 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 297 (497)
.++..|+|||.+.+..++.++|||||||++|+|++|..|+.......... .+........+...+..+.+++.+|
T Consensus 162 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~ 236 (277)
T cd06641 162 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLF-----LIPKNNPPTLEGNYSKPLKEFVEAC 236 (277)
T ss_pred cCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHH-----HHhcCCCCCCCcccCHHHHHHHHHH
Confidence 57788999999988889999999999999999999998774332111111 1111112223344667899999999
Q ss_pred cccCCCCCCCHHHHHHH
Q 010932 298 LQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 298 l~~dp~~Rps~~~ll~~ 314 (497)
|+.+|.+||++.+++++
T Consensus 237 l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 237 LNKEPSFRPTAKELLKH 253 (277)
T ss_pred ccCChhhCcCHHHHHhC
Confidence 99999999999999996
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=305.78 Aligned_cols=249 Identities=20% Similarity=0.267 Sum_probs=196.4
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
+.+++.+|.|++|.||+|... +|..||||.+...... ....+.+|++++++++||||+++++++.+....++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 81 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeecc
Confidence 456778899999999999975 5899999998754322 2357899999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----Cc
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KS 216 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 216 (497)
. ++|..++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 82 ~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (284)
T cd07860 82 H-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 159 (284)
T ss_pred c-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEeeccchhhcccCcccccc
Confidence 5 68988887655678999999999999999999999999 999999999999999999999999998754332 22
Q ss_pred cccCCCCCCccccccCC-CCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccc--------------------ccc
Q 010932 217 YSTNLAYTPPEFLRTGR-VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLL--------------------LMD 275 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~--------------------~~~ 275 (497)
..+++.|+|||++.+.. ++.++|||||||++|+|+||+.||............... .+.
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07860 160 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFP 239 (284)
T ss_pred ccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcc
Confidence 34578899999887654 588999999999999999999887643221110000000 000
Q ss_pred ccc---CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 276 SSL---EGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 276 ~~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
... .....+..+..+.++|.+||+.||.+|||+++++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 240 KWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred cccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 000 000112245678899999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=305.72 Aligned_cols=251 Identities=19% Similarity=0.255 Sum_probs=197.3
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeC--CceEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEG--DERLL 135 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 135 (497)
+..+.+++.+|.|+||.||+|..+ +++.||+|.++...... ...+.+|+.++.+++||||+++++++... ...++
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 345677888899999999999986 48999999997543322 34578899999999999999999998877 88999
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG- 214 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 214 (497)
|+||+. ++|.+++... ...+++..+..++.||+.||.|||+++ ++|+||||+||+++.++.++|+|||++......
T Consensus 84 v~e~~~-~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 84 VMEYVE-HDLKSLMETM-KQPFLQSEVKCLMLQLLSGVAHLHDNW-ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred EehhcC-cCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 999997 5898888653 346999999999999999999999999 999999999999999999999999998865443
Q ss_pred ---CccccCCCCCCccccccCC-CCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc----------------------
Q 010932 215 ---KSYSTNLAYTPPEFLRTGR-VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK---------------------- 268 (497)
Q Consensus 215 ---~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~---------------------- 268 (497)
....+++.|+|||.+.+.. ++.++||||||+++|+|++|..||...........
T Consensus 161 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (293)
T cd07843 161 KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGA 240 (293)
T ss_pred cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchh
Confidence 2234678899999987644 68899999999999999999987754321110000
Q ss_pred ---ccccccccccCCCCCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 269 ---NLLLLMDSSLEGQYANE-DATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 269 ---~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.............++.. .+..+.+++.+||+.||++|||+.+++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 241 KKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred cccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00000001111222222 46779999999999999999999999874
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=302.24 Aligned_cols=246 Identities=17% Similarity=0.258 Sum_probs=199.1
Q ss_pred cccccCCCCCCcEEEEEEE-cCCcEEEEEEccCCCCC------ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 65 LIVSESGDKAPNVVYRGRL-KNNRLVAIKRFSRQSWP------DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
...+.+|+|++|.||++.. .+++.||+|++...... ..+.+.+|+.+++.++|+||+++++++.+.+..++|+
T Consensus 3 ~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~ 82 (268)
T cd06630 3 LKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFV 82 (268)
T ss_pred cccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEE
Confidence 3445679999999999996 45899999998754321 1357899999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC-CeeEcccCCccccCCC--
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG-DPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~~-- 214 (497)
||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++|+||+|+||+++.++ .++|+|||.+......
T Consensus 83 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~al~~LH~~~-i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~ 159 (268)
T cd06630 83 EWMAGGSVSHLLSK--YGAFKEAVIINYTEQLLRGLSYLHENQ-IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGT 159 (268)
T ss_pred eccCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEcccccccccccccc
Confidence 99999999999865 457899999999999999999999999 99999999999998776 5999999998754322
Q ss_pred ------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHH
Q 010932 215 ------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288 (497)
Q Consensus 215 ------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (497)
....++..|+|||.+.+..++.++||||||+++|+|++|..|+......... ...............+...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 238 (268)
T cd06630 160 GAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHL-ALIFKIASATTAPSIPEHLSP 238 (268)
T ss_pred cCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchH-HHHHHHhccCCCCCCchhhCH
Confidence 1245678999999998888999999999999999999999887432211000 001111111223345566778
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+.+++.+||+.+|.+|||+.+++++
T Consensus 239 ~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 239 GLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 89999999999999999999999874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=328.81 Aligned_cols=251 Identities=16% Similarity=0.191 Sum_probs=184.6
Q ss_pred CcccccccCCCCCCcEEEEEEEcC--CcEEEEEEcc--------------C---CCCCChhHHHHHHHHhccCCCCccee
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN--NRLVAIKRFS--------------R---QSWPDPHQFVTEAAGLGNVRHKRLVN 122 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~--------------~---~~~~~~~~~~~e~~~l~~l~h~niv~ 122 (497)
..|.++++||+|+||+||++.++. +..+++|.+. + ........+.+|+.+|+.++|||||+
T Consensus 148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~ 227 (501)
T PHA03210 148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILK 227 (501)
T ss_pred hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCc
Confidence 567899999999999999987643 3333333111 0 01112346889999999999999999
Q ss_pred eeeeeeeCCceEEEEEcCCCCChhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCC
Q 010932 123 LIGCCAEGDERLLVAQYMPNDTLSKHLFHWD---KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGD 199 (497)
Q Consensus 123 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~ 199 (497)
+++++...+..++|++++. ++|..++.... ........+..|+.||+.||.|||+++ ||||||||+|||++.++.
T Consensus 228 l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g-IiHrDLKP~NILl~~~~~ 305 (501)
T PHA03210 228 IEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK-LIHRDIKLENIFLNCDGK 305 (501)
T ss_pred EeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCC
Confidence 9999999999999999985 56766664321 123346677889999999999999999 999999999999999999
Q ss_pred eeEcccCCccccCCC-----CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhh-----HH---Hh
Q 010932 200 PRLSSFGLMKNSRDG-----KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHAL-----DV---IR 266 (497)
Q Consensus 200 ~kl~Dfgla~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~-----~~---~~ 266 (497)
+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||++|..+|..... .. +.
T Consensus 306 vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~ 385 (501)
T PHA03210 306 IVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIID 385 (501)
T ss_pred EEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHH
Confidence 999999999865432 235689999999999999999999999999999999999865432210 00 00
Q ss_pred ccc------------cccccccc----cCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 267 GKN------------LLLLMDSS----LEGQYA-----NEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 267 ~~~------------~~~~~~~~----~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
... +...++.. .....+ ...+.++.+++.+||+.||++|||+.+++.+
T Consensus 386 ~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 386 SLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred hcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 000 00000000 000000 0134567888999999999999999999985
|
|
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=304.83 Aligned_cols=241 Identities=18% Similarity=0.244 Sum_probs=197.4
Q ss_pred cccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCCh
Q 010932 67 VSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTL 145 (497)
Q Consensus 67 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 145 (497)
.+.||.|++|.||++... +++.|++|++........+.+.+|+.+++.++||||+++++++...+..++|+||+++++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L 103 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGAL 103 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCH
Confidence 346699999999999975 5899999998755444456789999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----CccccCC
Q 010932 146 SKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KSYSTNL 221 (497)
Q Consensus 146 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~gt~ 221 (497)
.+++.. ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||.+...... ....+++
T Consensus 104 ~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 179 (285)
T cd06648 104 TDIVTH---TRMNEEQIATVCLAVLKALSFLHAQG-VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTP 179 (285)
T ss_pred HHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCc
Confidence 999854 56899999999999999999999999 999999999999999999999999987643322 2345788
Q ss_pred CCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccC
Q 010932 222 AYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYE 301 (497)
Q Consensus 222 ~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 301 (497)
.|+|||.+.+..++.++|||||||++|+|++|+.|+.......... .+....... ...+...+..+.+++.+||+.+
T Consensus 180 ~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~ 256 (285)
T cd06648 180 YWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMK-RIRDNLPPK--LKNLHKVSPRLRSFLDRMLVRD 256 (285)
T ss_pred cccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHH-HHHhcCCCC--CcccccCCHHHHHHHHHHcccC
Confidence 9999999998889999999999999999999998875432111111 011100011 1112235678999999999999
Q ss_pred CCCCCCHHHHHHH
Q 010932 302 AKDRPDVKFLLSA 314 (497)
Q Consensus 302 p~~Rps~~~ll~~ 314 (497)
|++|||+.+++++
T Consensus 257 p~~Rpt~~~il~~ 269 (285)
T cd06648 257 PAQRATAAELLNH 269 (285)
T ss_pred hhhCcCHHHHccC
Confidence 9999999999974
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=311.65 Aligned_cols=253 Identities=20% Similarity=0.237 Sum_probs=216.8
Q ss_pred hcCCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCceE
Q 010932 58 TNGFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 58 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 134 (497)
.+.+.-+.+++.||+|.|++|.++++. +|..||||++.+..... ++.+.+|+++|+.++|||||+++.+......+|
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly 131 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY 131 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence 344566788899999999999999975 49999999998765443 456899999999999999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
+||||+.+|.+.+++.+ .+.+.+..+..++.|+.++++|||+++ |+|||||++|||++.+.++||+|||++......
T Consensus 132 lV~eya~~ge~~~yl~~--~gr~~e~~ar~~F~q~vsaveYcH~k~-ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~ 208 (596)
T KOG0586|consen 132 LVMEYASGGELFDYLVK--HGRMKEKEARAKFRQIVSAVEYCHSKN-IVHRDLKAENILLDENMNIKIADFGFSTFFDYG 208 (596)
T ss_pred EEEEeccCchhHHHHHh--cccchhhhhhhhhHHHHHHHHHHhhcc-eeccccchhhcccccccceeeeccccceeeccc
Confidence 99999999999999976 556777999999999999999999999 999999999999999999999999999876543
Q ss_pred ---CccccCCCCCCccccccCCC-CcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHH
Q 010932 215 ---KSYSTNLAYTPPEFLRTGRV-IPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290 (497)
Q Consensus 215 ---~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (497)
.+.+|++.|.|||++.+..+ .+.+|+||+|++||-|+.|..||.+..........+.. ...++-..+.++
T Consensus 209 ~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~g------k~rIp~~ms~dc 282 (596)
T KOG0586|consen 209 LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRG------KYRIPFYMSCDC 282 (596)
T ss_pred ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheee------eecccceeechh
Confidence 57899999999999998876 67899999999999999999999766544443332221 123444567789
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 291 VELASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 291 ~~li~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
.++|+++|-.+|.+|+++.++.++-+.-.
T Consensus 283 e~lLrk~lvl~Pskr~~~dqim~~~W~n~ 311 (596)
T KOG0586|consen 283 EDLLRKFLVLNPSKRGPCDQIMKDRWRND 311 (596)
T ss_pred HHHHHHhhccCccccCCHHHhhhhcccch
Confidence 99999999999999999999999765543
|
|
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=302.69 Aligned_cols=242 Identities=20% Similarity=0.274 Sum_probs=195.8
Q ss_pred CCCCCCcEEEEEEEc-CCcEEEEEEccCCCC---CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCCh
Q 010932 70 SGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW---PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTL 145 (497)
Q Consensus 70 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 145 (497)
||+|+||+||++... +|+.||+|++..... .....+.+|+++|+.++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 589999999999865 589999999865322 2245678899999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---CccccCCC
Q 010932 146 SKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---KSYSTNLA 222 (497)
Q Consensus 146 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~gt~~ 222 (497)
.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++..
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR-IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPG 159 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCC
Confidence 99997654457999999999999999999999999 999999999999999999999999998754322 23456788
Q ss_pred CCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCC
Q 010932 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302 (497)
Q Consensus 223 y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 302 (497)
|+|||++.+..++.++|||||||++|+|++|+.||......... ..+..... ......+...++.+.+++.+||+.||
T Consensus 160 y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p 237 (277)
T cd05577 160 YMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK-EELKRRTL-EMAVEYPDKFSPEAKDLCEALLQKDP 237 (277)
T ss_pred cCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH-HHHHhccc-cccccCCccCCHHHHHHHHHHccCCh
Confidence 99999998888999999999999999999999887543211000 00000000 11223344567789999999999999
Q ss_pred CCCC-----CHHHHHHH
Q 010932 303 KDRP-----DVKFLLSA 314 (497)
Q Consensus 303 ~~Rp-----s~~~ll~~ 314 (497)
.+|| ++.+++.+
T Consensus 238 ~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 238 EKRLGCRGGSADEVREH 254 (277)
T ss_pred hHccCCCcccHHHHHhC
Confidence 9999 77778764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=316.91 Aligned_cols=239 Identities=16% Similarity=0.205 Sum_probs=194.6
Q ss_pred cCCCCCCcEEEEEEEcC-CcEEEEEEccCC----CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCc--eEEEEEcCC
Q 010932 69 ESGDKAPNVVYRGRLKN-NRLVAIKRFSRQ----SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE--RLLVAQYMP 141 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~~-~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e~~~ 141 (497)
.||+|+|-+||+|.+.. |..||.-.++.. .....++|..|+.+|+.|+|||||+++.+|.+... ..+|+|.+.
T Consensus 47 vLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~T 126 (632)
T KOG0584|consen 47 VLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFT 126 (632)
T ss_pred hcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeeccc
Confidence 46999999999999754 888887655432 22235789999999999999999999999987655 788999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CcccccCCCcceEeC-CCCCeeEcccCCccccCCC--Ccc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQN-RKLYHDLNAYRVLFD-EDGDPRLSSFGLMKNSRDG--KSY 217 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~-~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~~--~~~ 217 (497)
.|+|..++.+ -+.++...+..|++||+.||.|||++. +|||||||.+||+|+ ..|.|||+|+|||...... .+.
T Consensus 127 SGtLr~Y~kk--~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksv 204 (632)
T KOG0584|consen 127 SGTLREYRKK--HRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSV 204 (632)
T ss_pred CCcHHHHHHH--hccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcccccee
Confidence 9999999976 567899999999999999999999984 599999999999998 5599999999999875543 567
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHh
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKC 297 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 297 (497)
.|||.|||||... ..|+...||||||+.|+||+|+..|+..+.....-.+.+..=+.+ ..+..--.+++++||.+|
T Consensus 205 IGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP---~sl~kV~dPevr~fIekC 280 (632)
T KOG0584|consen 205 IGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKP---AALSKVKDPEVREFIEKC 280 (632)
T ss_pred ccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCH---HHhhccCCHHHHHHHHHH
Confidence 8999999999887 889999999999999999999999886653332222211111111 111111246799999999
Q ss_pred cccCCCCCCCHHHHHHH
Q 010932 298 LQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 298 l~~dp~~Rps~~~ll~~ 314 (497)
|.. ..+|||+.|+|.+
T Consensus 281 l~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 281 LAT-KSERLSAKELLKD 296 (632)
T ss_pred hcC-chhccCHHHHhhC
Confidence 999 9999999999985
|
|
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-38 Score=298.97 Aligned_cols=240 Identities=18% Similarity=0.207 Sum_probs=198.6
Q ss_pred CCCCCCcEEEEEEEcC-CcEEEEEEccCCCCC---ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCCh
Q 010932 70 SGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWP---DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTL 145 (497)
Q Consensus 70 lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 145 (497)
+|.|++|.||++.... ++.||+|++...... ..+.+.+|+.+++.++||||+++++.+.++...++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 5899999999999764 899999999754322 246799999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---CccccCCC
Q 010932 146 SKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---KSYSTNLA 222 (497)
Q Consensus 146 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~gt~~ 222 (497)
.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....+++.
T Consensus 81 ~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~-~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~ 157 (262)
T cd05572 81 WTILRD--RGLFDEYTARFYIACVVLAFEYLHNRG-IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPE 157 (262)
T ss_pred HHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcC
Confidence 999965 456899999999999999999999999 999999999999999999999999998865443 23467889
Q ss_pred CCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCC
Q 010932 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302 (497)
Q Consensus 223 y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 302 (497)
|++||.+.+..++.++|+||||+++|+|++|..|+.....+.. ..............++...+..+.+++.+||+.+|
T Consensus 158 ~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p 235 (262)
T cd05572 158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPM--EIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNP 235 (262)
T ss_pred ccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHH--HHHHHHhccCCCCCCCcccCHHHHHHHHHHccCCh
Confidence 9999999888899999999999999999999988754431110 00111111122233444557889999999999999
Q ss_pred CCCCC-----HHHHHHH
Q 010932 303 KDRPD-----VKFLLSA 314 (497)
Q Consensus 303 ~~Rps-----~~~ll~~ 314 (497)
++||| +.+++++
T Consensus 236 ~~R~~~~~~~~~~l~~~ 252 (262)
T cd05572 236 EERLGNLKGGIKDIKKH 252 (262)
T ss_pred hhCcCCcccCHHHHhcC
Confidence 99999 7888774
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-38 Score=304.15 Aligned_cols=258 Identities=18% Similarity=0.201 Sum_probs=200.2
Q ss_pred cCHHHHHHHhcCCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccC-CCCcceeeeee
Q 010932 49 FVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGC 126 (497)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~ 126 (497)
+.+.++...+++| .+++.+|+|+||.||++... +++.+|+|++.... .....+.+|+.++.++ +||||++++++
T Consensus 12 ~~~~~~~~~~~~y---~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~ 87 (291)
T cd06639 12 LGLESLGDPTDTW---EIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGM 87 (291)
T ss_pred hhcccCCCCCCCe---EEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEE
Confidence 3444554555544 67777899999999999975 58999999986542 2345688899999998 79999999999
Q ss_pred eeeC-----CceEEEEEcCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCC
Q 010932 127 CAEG-----DERLLVAQYMPNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGD 199 (497)
Q Consensus 127 ~~~~-----~~~~lv~e~~~~~~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~ 199 (497)
+... ...++||||+++++|.+++... ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.
T Consensus 88 ~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~nili~~~~~ 166 (291)
T cd06639 88 FYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR-IIHRDVKGNNILLTTEGG 166 (291)
T ss_pred EEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCCC
Confidence 8653 3589999999999999988531 2457899999999999999999999999 999999999999999999
Q ss_pred eeEcccCCccccCCC----CccccCCCCCCccccccC-----CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccc
Q 010932 200 PRLSSFGLMKNSRDG----KSYSTNLAYTPPEFLRTG-----RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNL 270 (497)
Q Consensus 200 ~kl~Dfgla~~~~~~----~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~ 270 (497)
++|+|||++...... ....++..|+|||.+... .++.++|||||||++|+|++|+.|+........... .
T Consensus 167 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~-~ 245 (291)
T cd06639 167 VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFK-I 245 (291)
T ss_pred EEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHH-H
Confidence 999999998754322 234578899999998643 368899999999999999999988754321111000 0
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 271 LLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.. ........+...+..+.+|+.+||+.+|++|||+.+++++
T Consensus 246 ~~--~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 246 PR--NPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred hc--CCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 00 0000111123355679999999999999999999999975
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-38 Score=301.91 Aligned_cols=245 Identities=19% Similarity=0.264 Sum_probs=201.5
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
.+.+...+|.|++|.||++.+. ++..|++|++..... ..+.+.+|+++++.++|+||+++++.+......++|+||++
T Consensus 20 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 98 (286)
T cd06614 20 LYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMD 98 (286)
T ss_pred cchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccC
Confidence 3455677899999999999986 589999999976543 45678999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----Ccc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KSY 217 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 217 (497)
+++|.+++.... ..+++..+..++.+++.||.|||+.| ++|+||+|+||+++.++.++|+|||++...... ...
T Consensus 99 ~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~g-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 176 (286)
T cd06614 99 GGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQN-VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSV 176 (286)
T ss_pred CCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccc
Confidence 999999997632 48999999999999999999999998 999999999999999999999999987654332 234
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccccccccc-CCCCCHHHHHHHHHHHHH
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSL-EGQYANEDATQLVELASK 296 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~ 296 (497)
.+++.|++||++.+..++.++|||||||++|+|++|..|+........... ...... ....+..++..+.+++.+
T Consensus 177 ~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~ 252 (286)
T cd06614 177 VGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFL----ITTKGIPPLKNPEKWSPEFKDFLNK 252 (286)
T ss_pred cCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HHhcCCCCCcchhhCCHHHHHHHHH
Confidence 567889999999888899999999999999999999988754322111100 000000 111122356789999999
Q ss_pred hcccCCCCCCCHHHHHHH
Q 010932 297 CLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~ 314 (497)
||+.+|.+|||+.+++++
T Consensus 253 ~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 253 CLVKDPEKRPSAEELLQH 270 (286)
T ss_pred HhccChhhCcCHHHHhhC
Confidence 999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-38 Score=302.30 Aligned_cols=246 Identities=20% Similarity=0.277 Sum_probs=192.6
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHHH-hccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAG-LGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
++.+++.+|+|+||.||++.+. +|+.||||+++..... ....+..|+.. ++.++||||+++++++..+...++||||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 81 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV 81 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence 3567788899999999999976 5999999998764322 23456666665 5667899999999999999999999999
Q ss_pred CCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcC-CCcccccCCCcceEeCCCCCeeEcccCCccccCCC--
Q 010932 140 MPNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNSQ-NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 140 ~~~~~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lh~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 214 (497)
++ ++|.+++... ....+++..+..++.||+.||.|||++ + ++||||||+||+++.++.+||+|||++......
T Consensus 82 ~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~-i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (283)
T cd06617 82 MD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS-VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVA 159 (283)
T ss_pred hc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 96 6787777542 245789999999999999999999997 7 999999999999999999999999998764432
Q ss_pred -CccccCCCCCCcccccc----CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCC-HHHHH
Q 010932 215 -KSYSTNLAYTPPEFLRT----GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA-NEDAT 288 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~----~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 288 (497)
....++..|+|||.+.+ ..++.++|||||||++|+|++|+.|+........ ........ .....+ ...+.
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~ 235 (283)
T cd06617 160 KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQ---QLKQVVEE-PSPQLPAEKFSP 235 (283)
T ss_pred cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHH---HHHHHHhc-CCCCCCccccCH
Confidence 22457889999998865 4468899999999999999999988753211100 01111111 111111 23567
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+.+++.+||..+|.+|||+.+++++
T Consensus 236 ~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 236 EFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 89999999999999999999999985
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-38 Score=299.10 Aligned_cols=246 Identities=21% Similarity=0.278 Sum_probs=203.8
Q ss_pred ccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 64 ELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
+++.+.+|.|++|.||++...+ |+.|+||++..... .....+.+|+..+..++|+||+++++++......++|+||++
T Consensus 3 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (264)
T cd06623 3 LERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMD 82 (264)
T ss_pred ceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecC
Confidence 4667788999999999999875 99999999876543 335689999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC----c
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNS-QNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK----S 216 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 216 (497)
+++|.+++.. ...+++..+..++.|++.||.|||+ .+ ++|+||+|+||+++.++.++|+|||.+....... .
T Consensus 83 ~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~~-~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~ 159 (264)
T cd06623 83 GGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLHTKRH-IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNT 159 (264)
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhccCC-CccCCCCHHHEEECCCCCEEEccCccceecccCCCcccc
Confidence 9999999965 3679999999999999999999999 88 9999999999999999999999999988654332 3
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHH-HHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANE-DATQLVELAS 295 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~ 295 (497)
..++..|+|||.+.+..++.++||||||+++|+|+||..|+......... .....+. .......+.. .+..+.+++.
T Consensus 160 ~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~l~~li~ 237 (264)
T cd06623 160 FVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFF-ELMQAIC-DGPPPSLPAEEFSPEFRDFIS 237 (264)
T ss_pred eeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHH-HHHHHHh-cCCCCCCCcccCCHHHHHHHH
Confidence 45678999999999888999999999999999999999887544210000 0001111 1111223333 6778999999
Q ss_pred HhcccCCCCCCCHHHHHHH
Q 010932 296 KCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~ 314 (497)
+||..+|++|||+.+++++
T Consensus 238 ~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 238 ACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred HHccCChhhCCCHHHHHhC
Confidence 9999999999999999985
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-38 Score=304.17 Aligned_cols=249 Identities=23% Similarity=0.327 Sum_probs=198.1
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
.+.+++.+|.|+||.||+|.++ +++.||||+++.... ...+.+.+|+++++.++|+||+++++++..++..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 3567788899999999999976 488999999875422 2246799999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC----
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK---- 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 215 (497)
++++.+..+... ...+++..+..++.+|+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.......
T Consensus 82 ~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (288)
T cd07833 82 VERTLLELLEAS--PGGLPPDAVRSYIWQLLQAIAYCHSHN-IIHRDIKPENILVSESGVLKLCDFGFARALRARPASPL 158 (288)
T ss_pred CCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEEeeecccccCCCccccc
Confidence 998777665543 456899999999999999999999999 9999999999999999999999999987644332
Q ss_pred -ccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHH--hccc------------------cc--
Q 010932 216 -SYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVI--RGKN------------------LL-- 271 (497)
Q Consensus 216 -~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~--~~~~------------------~~-- 271 (497)
...++..|+|||++.+. .++.++||||||+++|+|++|+.|+........ .... ..
T Consensus 159 ~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07833 159 TDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGV 238 (288)
T ss_pred cCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccc
Confidence 34567889999999887 789999999999999999999987754321100 0000 00
Q ss_pred ccccc----ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 272 LLMDS----SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 272 ~~~~~----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
...+. .....++...+..+.+|+++||..+|++|||+++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 239 AFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred ccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 00000 00011223347889999999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-38 Score=299.02 Aligned_cols=248 Identities=17% Similarity=0.191 Sum_probs=197.5
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccC-CCCcceeeeeeeeeCC------ce
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGD------ER 133 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~------~~ 133 (497)
+.+.+++.+|.|++|.||+|..+ +++.+++|++..... ..+.+.+|+.+++++ .|+||+++++++.... ..
T Consensus 6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (275)
T cd06608 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL 84 (275)
T ss_pred hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence 34577788899999999999986 488999999875543 346799999999999 6999999999997654 48
Q ss_pred EEEEEcCCCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcccc
Q 010932 134 LLVAQYMPNDTLSKHLFHWD--KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS 211 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 211 (497)
++||||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~ 163 (275)
T cd06608 85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK-VIHRDIKGQNILLTKNAEVKLVDFGVSAQL 163 (275)
T ss_pred EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEEccCCeEEECCCccceec
Confidence 99999999999999886533 467899999999999999999999999 999999999999999999999999998754
Q ss_pred CCC----CccccCCCCCCcccccc-----CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCC
Q 010932 212 RDG----KSYSTNLAYTPPEFLRT-----GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282 (497)
Q Consensus 212 ~~~----~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (497)
... ....++..|+|||++.. ..++.++|||||||++|+|++|..||........... +.. ........
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~--~~~~~~~~ 240 (275)
T cd06608 164 DSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFK-IPR--NPPPTLKS 240 (275)
T ss_pred ccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHH-hhc--cCCCCCCc
Confidence 332 23457889999998853 3467899999999999999999988753221111110 000 00001112
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 283 ANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 283 ~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+...+..+.+|+.+||..||++|||+.+++++
T Consensus 241 ~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 241 PENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred hhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 23356789999999999999999999999874
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=297.35 Aligned_cols=248 Identities=19% Similarity=0.294 Sum_probs=197.7
Q ss_pred ccccccCCCCCCcEEEEEEEcC--CcEEEEEEccCCCC----------CChhHHHHHHHHhcc-CCCCcceeeeeeeeeC
Q 010932 64 ELIVSESGDKAPNVVYRGRLKN--NRLVAIKRFSRQSW----------PDPHQFVTEAAGLGN-VRHKRLVNLIGCCAEG 130 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~~----------~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~ 130 (497)
+.+++.+|.|+||.||++.+.. ++.+|+|.+..... .....+.+|+.++.+ ++||||+++++++..+
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 4566778999999999999764 78999998853221 123457788888865 7999999999999999
Q ss_pred CceEEEEEcCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHc-CCCcccccCCCcceEeCCCCCeeEcccCC
Q 010932 131 DERLLVAQYMPNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNS-QNRKLYHDLNAYRVLFDEDGDPRLSSFGL 207 (497)
Q Consensus 131 ~~~~lv~e~~~~~~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lh~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 207 (497)
+..++||||+++++|.+++... ....+++..+..++.|++.||.|||+ .+ ++|+||+|+||+++.++.++|+|||+
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~-i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR-IVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc-eeecCCCHHHEEECCCCcEEEecccc
Confidence 9999999999999999887432 24578999999999999999999996 56 99999999999999999999999999
Q ss_pred ccccCCC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCH
Q 010932 208 MKNSRDG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYAN 284 (497)
Q Consensus 208 a~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (497)
+...... ....++..|++||.+.+..++.++||||||+++|+|++|+.|+........... ............
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~ 236 (269)
T cd08528 161 AKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATK----IVEAVYEPLPEG 236 (269)
T ss_pred eeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHH----HhhccCCcCCcc
Confidence 8765433 244578899999999988899999999999999999999987644322211111 111111111112
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 010932 285 EDATQLVELASKCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 285 ~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~ 316 (497)
..+..+.+++.+||+.||++|||+.++..++.
T Consensus 237 ~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 237 MYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred cCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 35677999999999999999999999998874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-38 Score=300.77 Aligned_cols=239 Identities=19% Similarity=0.204 Sum_probs=189.6
Q ss_pred CCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC---hhHHHHHHHHh---ccCCCCcceeeeeeeeeCCceEEEEEcCCC
Q 010932 70 SGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD---PHQFVTEAAGL---GNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142 (497)
Q Consensus 70 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l---~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 142 (497)
||+|+||.||++... +|+.||||++....... ...+.+|..++ ...+||||+.+++++...+..++||||+++
T Consensus 2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (279)
T cd05633 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNG 81 (279)
T ss_pred cccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCC
Confidence 699999999999975 48999999987543221 22344554433 344799999999999998999999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--CccccC
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KSYSTN 220 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~~gt 220 (497)
++|..++.. .+.+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||++...... ....+|
T Consensus 82 ~~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (279)
T cd05633 82 GDLHYHLSQ--HGVFSEKEMRFYATEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 158 (279)
T ss_pred CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCC
Confidence 999998865 457999999999999999999999999 999999999999999999999999998754332 234688
Q ss_pred CCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcc
Q 010932 221 LAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299 (497)
Q Consensus 221 ~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 299 (497)
+.|+|||.+.+ ..++.++|||||||++|+|++|..||.......... +.. .........+...+..+.+++.+||+
T Consensus 159 ~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~li~~~l~ 235 (279)
T cd05633 159 HGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--IDR-MTLTVNVELPDSFSPELKSLLEGLLQ 235 (279)
T ss_pred cCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH--HHH-HhhcCCcCCccccCHHHHHHHHHHhc
Confidence 99999999874 557999999999999999999999875432111100 000 01111223455567889999999999
Q ss_pred cCCCCCC-----CHHHHHHH
Q 010932 300 YEAKDRP-----DVKFLLSA 314 (497)
Q Consensus 300 ~dp~~Rp-----s~~~ll~~ 314 (497)
.||.+|| |+.+++++
T Consensus 236 ~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 236 RDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CCHHHhcCCCCCCHHHHHhC
Confidence 9999999 69999987
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-38 Score=297.14 Aligned_cols=245 Identities=18% Similarity=0.268 Sum_probs=201.1
Q ss_pred ccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 64 ELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
+.+.+.+|.|+||.||++..+. |..||+|.+..... ...+.+.+|+++++.++|+||+++++.+......++|+||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYC 81 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecC
Confidence 3456678999999999999764 88999999865422 23457889999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCC-eeEcccCCccccCCCC----
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGD-PRLSSFGLMKNSRDGK---- 215 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~-~kl~Dfgla~~~~~~~---- 215 (497)
++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++. ++|+|||.+.......
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (257)
T cd08225 82 DGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK-ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAY 160 (257)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEcCCCCeEEecccccchhccCCccccc
Confidence 9999999997654557899999999999999999999999 999999999999998864 6999999987654432
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
...+++.|+|||++.+..++.++|||||||++|+|++|..|+........... ..... ....++..+..+.+++.
T Consensus 161 ~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~i~ 235 (257)
T cd08225 161 TCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLK----ICQGY-FAPISPNFSRDLRSLIS 235 (257)
T ss_pred ccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHH----Hhccc-CCCCCCCCCHHHHHHHH
Confidence 23578899999999888899999999999999999999988754322211111 11111 11223345678999999
Q ss_pred HhcccCCCCCCCHHHHHHH
Q 010932 296 KCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~ 314 (497)
+||+.+|++|||+.+++.+
T Consensus 236 ~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 236 QLFKVSPRDRPSITSILKR 254 (257)
T ss_pred HHhccChhhCcCHHHHhhC
Confidence 9999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-38 Score=299.29 Aligned_cols=248 Identities=21% Similarity=0.300 Sum_probs=194.1
Q ss_pred cccccCCCCCCcEEEEEEEc----CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeCC------c
Q 010932 65 LIVSESGDKAPNVVYRGRLK----NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD------E 132 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~ 132 (497)
.+.+.||+|+||.||+|.++ +++.||||++...... ..+++.+|+++++.++||||+++++++.... .
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 81 (273)
T cd05074 2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI 81 (273)
T ss_pred cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence 34567899999999999863 3689999999754322 2457889999999999999999999886532 2
Q ss_pred eEEEEEcCCCCChhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCc
Q 010932 133 RLLVAQYMPNDTLSKHLFHW----DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLM 208 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~----~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 208 (497)
.+++++|+++++|..++... ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 82 PMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN-FIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred eEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccchhhEEEcCCCCEEECccccc
Confidence 47889999999998877431 1235889999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCC
Q 010932 209 KNSRDGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQ 281 (497)
Q Consensus 209 ~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (497)
+...... ...+++.|++||.+....++.++|||||||++|+|++ |+.|+........... +.. .....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~----~~~-~~~~~ 235 (273)
T cd05074 161 KKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNY----LIK-GNRLK 235 (273)
T ss_pred ccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHH----HHc-CCcCC
Confidence 8643221 2234567999999988889999999999999999999 6666543322111110 000 01112
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhh
Q 010932 282 YANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 282 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
.+...+..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 236 ~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 236 QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 2234567899999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-38 Score=301.64 Aligned_cols=250 Identities=22% Similarity=0.253 Sum_probs=193.1
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC-hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
..|.+++.||+|+||.||+|... +|..||||++....... ...+.+|+.+++.++|+||+++++++..+...++|+||
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEY 84 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEec
Confidence 34677888999999999999975 58999999987543322 34678999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----C
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----K 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 215 (497)
+. ++|.+++... ...+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.++|+|||+++..... .
T Consensus 85 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 161 (291)
T cd07870 85 MH-TDLAQYMIQH-PGGLHPYNVRLFMFQLLRGLAYIHGQH-ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYS 161 (291)
T ss_pred cc-CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCC
Confidence 95 6777666442 356888899999999999999999999 999999999999999999999999998753322 2
Q ss_pred ccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccc------------------ccccccc
Q 010932 216 SYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKN------------------LLLLMDS 276 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~------------------~~~~~~~ 276 (497)
...+++.|+|||.+.+. .++.++|||||||++|+|++|..||............ .......
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (291)
T cd07870 162 SEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPE 241 (291)
T ss_pred CccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccch
Confidence 33568899999998764 4788999999999999999999887543211000000 0000000
Q ss_pred cc----CCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 277 SL----EGQY-----ANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 277 ~~----~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.. .... ....+..+.+++.+|++.||.+|||+.+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 242 WFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred hccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 00 0000 00124578899999999999999999999864
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-38 Score=306.86 Aligned_cols=243 Identities=17% Similarity=0.206 Sum_probs=190.4
Q ss_pred CCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCChhh
Q 010932 71 GDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSK 147 (497)
Q Consensus 71 g~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 147 (497)
|.|+||+||++.+. +|+.||||++....... .+.+.+|+.+++.++||||+++++++..++..++|+||+.+++|.+
T Consensus 9 g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~ 88 (328)
T cd08226 9 GFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANS 88 (328)
T ss_pred cccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHH
Confidence 45599999999975 59999999987543222 3578899999999999999999999999999999999999999999
Q ss_pred hhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-----------Cc
Q 010932 148 HLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-----------KS 216 (497)
Q Consensus 148 ~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----------~~ 216 (497)
++.......+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++++||+.+...... ..
T Consensus 89 ~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (328)
T cd08226 89 LLKTYFPEGMSEALIGNILFGALRGLNYLHQNG-YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQF 167 (328)
T ss_pred HHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccccccc
Confidence 987654557899999999999999999999999 999999999999999999999999854322110 01
Q ss_pred cccCCCCCCccccccC--CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc-----------------------
Q 010932 217 YSTNLAYTPPEFLRTG--RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL----------------------- 271 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~--~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~----------------------- 271 (497)
..++..|+|||++.+. .++.++|||||||++|+|++|+.||..............
T Consensus 168 ~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (328)
T cd08226 168 STSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQ 247 (328)
T ss_pred ccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccch
Confidence 1235679999999764 478999999999999999999988754321111000000
Q ss_pred ------------------cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 272 ------------------LLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 272 ------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
...........+..++..+.+|+++||+.||++|||+.+++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 248 SGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred hhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0000111112234467789999999999999999999999986
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=296.25 Aligned_cols=242 Identities=17% Similarity=0.176 Sum_probs=192.0
Q ss_pred ccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC---hhHHHHHHHHh-ccCCCCcceeeeeeeeeCCceEEEEEcCCC
Q 010932 68 SESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD---PHQFVTEAAGL-GNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l-~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 142 (497)
+.+|.|+||.||+|... +|+.||||++....... ...+..|..++ ...+|+||+++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 45799999999999975 48999999987543221 22344555444 455899999999999999999999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCccccCCC
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA 222 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~gt~~ 222 (497)
++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..........+++.
T Consensus 82 ~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (260)
T cd05611 82 GDCASLIKT--LGGLPEDWAKQYIAEVVLGVEDLHQRG-IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPD 158 (260)
T ss_pred CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcC
Confidence 999999865 457899999999999999999999999 99999999999999999999999999887655556678899
Q ss_pred CCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCC
Q 010932 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302 (497)
Q Consensus 223 y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 302 (497)
|+|||.+.+..++.++||||||+++|+|++|..|+............... ...........++..+.+++.+||+.||
T Consensus 159 y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~l~~~p 236 (260)
T cd05611 159 YLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSR--RINWPEEVKEFCSPEAVDLINRLLCMDP 236 (260)
T ss_pred ccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc--ccCCCCcccccCCHHHHHHHHHHccCCH
Confidence 99999998888899999999999999999999887544322211110000 0011112223456789999999999999
Q ss_pred CCCCCH---HHHHHH
Q 010932 303 KDRPDV---KFLLSA 314 (497)
Q Consensus 303 ~~Rps~---~~ll~~ 314 (497)
++|||+ ++++.+
T Consensus 237 ~~R~~~~~~~~~l~~ 251 (260)
T cd05611 237 AKRLGANGYQEIKSH 251 (260)
T ss_pred HHccCCCcHHHHHcC
Confidence 999966 455543
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=292.43 Aligned_cols=244 Identities=22% Similarity=0.258 Sum_probs=202.9
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCC
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 142 (497)
+.+.+.+|+|++|.||++... ++..+++|++..........+.+|+.+++.++|+||+++++++......++++||+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~ 81 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG 81 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence 455677899999999999986 5899999999876554567899999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---Ccccc
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---KSYST 219 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~g 219 (497)
++|.+++... ...+++..+..++.+++.+|.+||..+ ++|+||+|+||+++.++.++|+|||.+...... ....+
T Consensus 82 ~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 159 (253)
T cd05122 82 GSLKDLLKST-NQTLTESQIAYVCKELLKGLEYLHSNG-IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVG 159 (253)
T ss_pred CcHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhcCC-EecCCCCHHHEEEccCCeEEEeeccccccccccccccceec
Confidence 9999998653 257999999999999999999999998 999999999999999999999999998865544 34567
Q ss_pred CCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCC--CHHHHHHHHHHHHHh
Q 010932 220 NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY--ANEDATQLVELASKC 297 (497)
Q Consensus 220 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~c 297 (497)
+..|++||.+.+..++.++||||||+++|+|++|+.|+.............. ...... +...+..+.+++.+|
T Consensus 160 ~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~ 234 (253)
T cd05122 160 TPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT-----NGPPGLRNPEKWSDEFKDFLKKC 234 (253)
T ss_pred CCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-----cCCCCcCcccccCHHHHHHHHHH
Confidence 8899999999988899999999999999999999988754311111000000 111111 122367799999999
Q ss_pred cccCCCCCCCHHHHHHH
Q 010932 298 LQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 298 l~~dp~~Rps~~~ll~~ 314 (497)
|+.||++|||+.+++++
T Consensus 235 l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 235 LQKNPEKRPTAEQLLKH 251 (253)
T ss_pred ccCChhhCCCHHHHhcC
Confidence 99999999999999874
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=297.63 Aligned_cols=242 Identities=19% Similarity=0.262 Sum_probs=196.9
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC-CChhHHHHHHHHhccCC---CCcceeeeeeeeeCCceEEEEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVR---HKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e 138 (497)
+.+++.+|.|+||.||+|.+. +++.||||++..... .....+.+|+.+++.++ ||||+++++++..+...++|||
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e 82 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME 82 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence 455677899999999999974 589999999875432 33567889999999996 9999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---- 214 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 214 (497)
|+++++|.+++.. ..+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06917 83 YAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKVG-VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKR 158 (277)
T ss_pred cCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHHEEEcCCCCEEEccCCceeecCCCcccc
Confidence 9999999998854 47899999999999999999999999 999999999999999999999999998754432
Q ss_pred CccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCH-HHHHHHHH
Q 010932 215 KSYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYAN-EDATQLVE 292 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~ 292 (497)
....++..|+|||.+.++ .++.++|||||||++|+|++|..|+.......... ..........+. ..+..+.+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 233 (277)
T cd06917 159 STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMM-----LIPKSKPPRLEDNGYSKLLRE 233 (277)
T ss_pred ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhh-----ccccCCCCCCCcccCCHHHHH
Confidence 234578889999998754 46889999999999999999998875432211110 011111111222 25678999
Q ss_pred HHHHhcccCCCCCCCHHHHHHH
Q 010932 293 LASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~ 314 (497)
++.+||+.||++|||+.+++.+
T Consensus 234 ~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 234 FVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred HHHHHcCCCcccCcCHHHHhhC
Confidence 9999999999999999999885
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-38 Score=304.06 Aligned_cols=248 Identities=20% Similarity=0.185 Sum_probs=194.7
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-----ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-----DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
+.+++.+|.|+||.||+|... +|+.||||.+...... ....+..|+++++.++|+||+++++++.+.+..++||
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF 81 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence 455677899999999999975 5899999999765433 1345778999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC--
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK-- 215 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 215 (497)
||+ +++|.+++... ...+++..+..++.||+.||.|||+++ ++|+||||+||+++.++.++|+|||+++......
T Consensus 82 e~~-~~~L~~~i~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (298)
T cd07841 82 EFM-ETDLEKVIKDK-SIVLTPADIKSYMLMTLRGLEYLHSNW-ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK 158 (298)
T ss_pred ccc-CCCHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc
Confidence 999 89999999652 237999999999999999999999999 9999999999999999999999999988654332
Q ss_pred --ccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccc-----------------cccccc
Q 010932 216 --SYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKN-----------------LLLLMD 275 (497)
Q Consensus 216 --~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~-----------------~~~~~~ 275 (497)
...+++.|+|||.+.+ ..++.++|||||||++|+|++|..+|............ ......
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (298)
T cd07841 159 MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVE 238 (298)
T ss_pred ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccccc
Confidence 2345678999998865 45789999999999999999997655432110000000 000000
Q ss_pred cccCCC-----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 276 SSLEGQ-----YANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 276 ~~~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
...... .....+..+.+++.+||+.||++|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 239 FKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000000 112346789999999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=337.81 Aligned_cols=241 Identities=17% Similarity=0.203 Sum_probs=201.8
Q ss_pred ccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCC
Q 010932 68 SESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDT 144 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 144 (497)
..+|.|.||.||-+... +|+..|+|.++..... ....+.+|..+|..++|||+|+++|+=.+.+..+|.||||.+|+
T Consensus 1241 ~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~Gs 1320 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGS 1320 (1509)
T ss_pred cccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCc
Confidence 35699999999999954 5999999998754333 24578899999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--------Cc
Q 010932 145 LSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--------KS 216 (497)
Q Consensus 145 L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--------~~ 216 (497)
|.+.+.. ++..++.....+..|++.|+.|||++| ||||||||.||+++.+|.+|++|||.|...... ..
T Consensus 1321 La~ll~~--gri~dE~vt~vyt~qll~gla~LH~~g-IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~ 1397 (1509)
T KOG4645|consen 1321 LASLLEH--GRIEDEMVTRVYTKQLLEGLAYLHEHG-IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQS 1397 (1509)
T ss_pred HHHHHHh--cchhhhhHHHHHHHHHHHHHHHHHhcC-ceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHh
Confidence 9999965 566888888899999999999999999 999999999999999999999999999865443 24
Q ss_pred cccCCCCCCccccccCC---CCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGR---VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVEL 293 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~---~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 293 (497)
..||+.|||||++.+.+ ...+.||||||||+.||+||++|..... ....+.--+.-.-.+.+|...+.+-.+|
T Consensus 1398 ~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~d----ne~aIMy~V~~gh~Pq~P~~ls~~g~dF 1473 (1509)
T KOG4645|consen 1398 MMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELD----NEWAIMYHVAAGHKPQIPERLSSEGRDF 1473 (1509)
T ss_pred hcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhcc----chhHHHhHHhccCCCCCchhhhHhHHHH
Confidence 67899999999998643 4568999999999999999999753211 0111111222333566788899999999
Q ss_pred HHHhcccCCCCCCCHHHHHHHh
Q 010932 294 ASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 294 i~~cl~~dp~~Rps~~~ll~~l 315 (497)
+.+||..||++|-++.+++++-
T Consensus 1474 le~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1474 LEHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred HHHHHhcCchhhhHHHHHHHhh
Confidence 9999999999999999998863
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=327.15 Aligned_cols=256 Identities=20% Similarity=0.203 Sum_probs=213.3
Q ss_pred HHHHHHhcCCCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccC---CCCCChhHHHHHHHHhccCCCCcceeeeeee
Q 010932 52 ADLRAATNGFSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSR---QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCC 127 (497)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~ 127 (497)
..+....-+=+++.+++.||+|+||.|..+++++ ++.||+|++.+ -...+...|..|-.+|..-+.+.|+.++-.|
T Consensus 65 ~~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAF 144 (1317)
T KOG0612|consen 65 KKVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAF 144 (1317)
T ss_pred HHHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHh
Confidence 3444444555677889999999999999999875 99999999976 2334456799999999999999999999999
Q ss_pred eeCCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCC
Q 010932 128 AEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGL 207 (497)
Q Consensus 128 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 207 (497)
++..++||||||++||+|-.++... ..+|+..++.++..|+-||.-+|+.| +|||||||+|||||..|++||+|||.
T Consensus 145 QD~~~LYlVMdY~pGGDlltLlSk~--~~~pE~~ArFY~aEiVlAldslH~mg-yVHRDiKPDNvLld~~GHikLADFGs 221 (1317)
T KOG0612|consen 145 QDERYLYLVMDYMPGGDLLTLLSKF--DRLPEDWARFYTAEIVLALDSLHSMG-YVHRDIKPDNVLLDKSGHIKLADFGS 221 (1317)
T ss_pred cCccceEEEEecccCchHHHHHhhc--CCChHHHHHHHHHHHHHHHHHHHhcc-ceeccCCcceeEecccCcEeeccchh
Confidence 9999999999999999999999763 38999999999999999999999999 99999999999999999999999998
Q ss_pred ccccCCC-----CccccCCCCCCccccc----c-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccc
Q 010932 208 MKNSRDG-----KSYSTNLAYTPPEFLR----T-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSS 277 (497)
Q Consensus 208 a~~~~~~-----~~~~gt~~y~aPE~~~----~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~ 277 (497)
+-.+... ...+|||.|++||++. + +.|...+|+||+||++|||+.|..||+.+..-...+. +++..
T Consensus 222 Clkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~K----Im~hk 297 (1317)
T KOG0612|consen 222 CLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGK----IMNHK 297 (1317)
T ss_pred HHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHH----Hhchh
Confidence 8765533 2457999999999996 2 5689999999999999999999999987654433333 22222
Q ss_pred cCCCCC--HHHHHHHHHHHHHhcccCCCCCCC---HHHHHHHh
Q 010932 278 LEGQYA--NEDATQLVELASKCLQYEAKDRPD---VKFLLSAV 315 (497)
Q Consensus 278 ~~~~~~--~~~~~~l~~li~~cl~~dp~~Rps---~~~ll~~l 315 (497)
-.-.+| ...++.+.+||.+.+. +|+.|.. ++++-.|-
T Consensus 298 ~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~Hp 339 (1317)
T KOG0612|consen 298 ESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHP 339 (1317)
T ss_pred hhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCc
Confidence 222333 4478899999999887 6889987 88888763
|
|
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=298.73 Aligned_cols=248 Identities=21% Similarity=0.260 Sum_probs=195.1
Q ss_pred cccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 65 LIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
.+++.+|.|++|.||+|.+. +|..||||++...... ....+.+|+++++.++||||+++++++.+++..++||||++
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~ 81 (283)
T cd07835 2 QKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD 81 (283)
T ss_pred chheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC
Confidence 46677899999999999975 5999999998754322 23568899999999999999999999999999999999995
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----Ccc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KSY 217 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 217 (497)
++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ...
T Consensus 82 -~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~-~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~ 159 (283)
T cd07835 82 -LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR-VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHE 159 (283)
T ss_pred -cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCcc
Confidence 68999886644457999999999999999999999998 999999999999999999999999998754322 223
Q ss_pred ccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccc-----------------cccc---cc-
Q 010932 218 STNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKN-----------------LLLL---MD- 275 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~-----------------~~~~---~~- 275 (497)
.+++.|+|||++.+. .++.++|||||||++|+|++|..||............ .... ..
T Consensus 160 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T cd07835 160 VVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPK 239 (283)
T ss_pred ccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhccc
Confidence 457889999988764 4688999999999999999999887543211100000 0000 00
Q ss_pred --cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 276 --SSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 276 --~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
........+..+..+.+++.+||+.||.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 240 WARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred ccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000001122345678999999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=307.05 Aligned_cols=247 Identities=20% Similarity=0.238 Sum_probs=194.0
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC--CCChhHHHHHHHHhccCCCCcceeeeeeeeeC------Cc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS--WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG------DE 132 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~ 132 (497)
..+.+++.||.|+||.||++... +|+.||||++.... ......+.+|+.+++.++||||+++++++... ..
T Consensus 16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 95 (353)
T cd07850 16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQD 95 (353)
T ss_pred cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCc
Confidence 45677888899999999999975 58999999986432 22345688899999999999999999988643 35
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
.++||||+. ++|.+.+.. .++...+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++...
T Consensus 96 ~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 169 (353)
T cd07850 96 VYLVMELMD-ANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 169 (353)
T ss_pred EEEEEeccC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCccceeCC
Confidence 799999995 578887743 3899999999999999999999999 9999999999999999999999999998654
Q ss_pred CC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc------------------ccc
Q 010932 213 DG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK------------------NLL 271 (497)
Q Consensus 213 ~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~------------------~~~ 271 (497)
.. ....+++.|+|||.+.+..++.++|||||||++|+|++|+.||........... ...
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (353)
T cd07850 170 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVR 249 (353)
T ss_pred CCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhh
Confidence 33 234578899999999999999999999999999999999988764321100000 000
Q ss_pred ---------------ccccccc----CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 272 ---------------LLMDSSL----EGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 272 ---------------~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
....... ....+...+..+.+++.+||+.||++|||+.++|.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 250 NYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000000 000012346678999999999999999999999986
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=299.78 Aligned_cols=251 Identities=21% Similarity=0.217 Sum_probs=194.6
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
..+.+.+.||.|++|+||+|..+ +|+.||||.+..... .....+.+|+++++.++||||+++++++......++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 45677888999999999999976 589999999865432 223568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC-CCCeeEcccCCccccCCC---
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE-DGDPRLSSFGLMKNSRDG--- 214 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~~~~~~--- 214 (497)
|++ ++|.+++.......+++..+..++.||+.||.|||+++ ++|+||+|+||+++. ++.+||+|||++......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~ 159 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR-VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT 159 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCcceEEEECCCCEEEEcccccccccCCCccc
Confidence 995 57888776544445788899999999999999999999 999999999999985 567999999998754322
Q ss_pred -CccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccc-------cccccc----------
Q 010932 215 -KSYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKN-------LLLLMD---------- 275 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~-------~~~~~~---------- 275 (497)
....+++.|+|||++.+. .++.++|||||||++|+|+||+.||............ ......
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (294)
T PLN00009 160 FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKS 239 (294)
T ss_pred cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhh
Confidence 234567899999998764 5789999999999999999999887543211100000 000000
Q ss_pred --cccCC----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 276 --SSLEG----QYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 276 --~~~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+.... ...+..+..+.+++.+||+.+|++||++.+++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 240 AFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 0112345678999999999999999999999974
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-39 Score=287.50 Aligned_cols=251 Identities=18% Similarity=0.249 Sum_probs=195.8
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-----CcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeee-CCce
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-----NRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAE-GDER 133 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~ 133 (497)
..|++++.||+|+||.||++.-++ ...+|||.++...... .....+|+.+++.++||||+.+..+|.. +...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 457889999999999999997432 2379999998653322 4578999999999999999999999987 7789
Q ss_pred EEEEEcCCCCChhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC----CCeeEcccC
Q 010932 134 LLVAQYMPNDTLSKHLFHWD---KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED----GDPRLSSFG 206 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~---~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~----~~~kl~Dfg 206 (497)
+|++||.+. +|...|+.+. ...++...+.+|+.||+.|+.|||++- |+||||||.||||..+ |.|||+|||
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW-vlHRDLKPaNIlvmgdgperG~VKIaDlG 181 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW-VLHRDLKPANILVMGDGPERGRVKIADLG 181 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh-eeeccCCcceEEEeccCCccCeeEeeccc
Confidence 999999975 5888876432 357999999999999999999999999 9999999999999877 999999999
Q ss_pred CccccCCC-------CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc--------cc
Q 010932 207 LMKNSRDG-------KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK--------NL 270 (497)
Q Consensus 207 la~~~~~~-------~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~--------~~ 270 (497)
+++...+. ...+.|++|+|||.+.+ ..||.+.|||+.||+..||+|-.+.|.+...+..... .+
T Consensus 182 laR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rI 261 (438)
T KOG0666|consen 182 LARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRI 261 (438)
T ss_pred HHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHH
Confidence 99976543 34566899999999987 5699999999999999999999877754422211110 01
Q ss_pred ccccccccCCCC------C---------------H-----------HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 271 LLLMDSSLEGQY------A---------------N-----------EDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 271 ~~~~~~~~~~~~------~---------------~-----------~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..++.......+ | . .-++...+|+.++|..||-+|.|+++++++
T Consensus 262 f~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 262 FEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred HHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence 111110000000 0 0 012348899999999999999999999986
|
|
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=291.75 Aligned_cols=244 Identities=20% Similarity=0.236 Sum_probs=203.5
Q ss_pred cccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeC--CceEEEEEc
Q 010932 65 LIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG--DERLLVAQY 139 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~ 139 (497)
.+.+.+|+|++|.||+|... ++..|++|++..... ...+.+.+|+.++++++||||+++++.+... ...++|+||
T Consensus 3 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 82 (260)
T cd06606 3 TRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEY 82 (260)
T ss_pred eeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEe
Confidence 44566799999999999986 589999999876543 2356799999999999999999999999988 889999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-----
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----- 214 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 214 (497)
+++++|.+++.. ...+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+......
T Consensus 83 ~~~~~L~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~-~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 159 (260)
T cd06606 83 VSGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSNG-IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEG 159 (260)
T ss_pred cCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEcccccEEeccccccccc
Confidence 999999999875 348999999999999999999999998 999999999999999999999999998765443
Q ss_pred -CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHH
Q 010932 215 -KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVEL 293 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 293 (497)
....++..|+|||.+.+...+.++||||||+++++|++|..|+........ ..............+...+..+.++
T Consensus 160 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (260)
T cd06606 160 TGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMA---ALYKIGSSGEPPEIPEHLSEEAKDF 236 (260)
T ss_pred ccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH---HHHhccccCCCcCCCcccCHHHHHH
Confidence 234577899999999988899999999999999999999988754431110 0111111122334455567889999
Q ss_pred HHHhcccCCCCCCCHHHHHHH
Q 010932 294 ASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 294 i~~cl~~dp~~Rps~~~ll~~ 314 (497)
+.+||+.||++|||+.+++.+
T Consensus 237 i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 237 LRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred HHHhCcCChhhCCCHHHHhhC
Confidence 999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=297.97 Aligned_cols=240 Identities=18% Similarity=0.266 Sum_probs=196.2
Q ss_pred ccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCChh
Q 010932 68 SESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLS 146 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 146 (497)
..+|+|+||.||++..+ +|+.||||++..........+.+|+.+++.++|+||+++++.+...+..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 45699999999999975 58999999986544444567999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----CccccCCC
Q 010932 147 KHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KSYSTNLA 222 (497)
Q Consensus 147 ~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~gt~~ 222 (497)
+++. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....+++.
T Consensus 106 ~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~g-ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 181 (292)
T cd06657 106 DIVT---HTRMNEEQIAAVCLAVLKALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPY 181 (292)
T ss_pred HHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCcc
Confidence 9874 346899999999999999999999999 999999999999999999999999987654322 23457889
Q ss_pred CCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCC
Q 010932 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302 (497)
Q Consensus 223 y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 302 (497)
|+|||.+.+..++.++|||||||++|+|++|..|+........... ......... ......+..+.+++.+||+.||
T Consensus 182 y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~P 258 (292)
T cd06657 182 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM-IRDNLPPKL--KNLHKVSPSLKGFLDRLLVRDP 258 (292)
T ss_pred ccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhhCCccc--CCcccCCHHHHHHHHHHHhCCc
Confidence 9999999888899999999999999999999988754322111000 000011111 0112345678999999999999
Q ss_pred CCCCCHHHHHHH
Q 010932 303 KDRPDVKFLLSA 314 (497)
Q Consensus 303 ~~Rps~~~ll~~ 314 (497)
.+||++.+++.+
T Consensus 259 ~~R~~~~~ll~~ 270 (292)
T cd06657 259 AQRATAAELLKH 270 (292)
T ss_pred ccCcCHHHHhcC
Confidence 999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=300.56 Aligned_cols=248 Identities=22% Similarity=0.226 Sum_probs=198.8
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC---ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP---DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
+..++.+|.|+||.||+|... ++..||||.+...... ..+.+.+|+++++.++|+|++++++++......++||||
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 96 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence 345677899999999999975 4889999998643221 234688999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCcccc
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYST 219 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~g 219 (497)
+. ++|.+.+... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..........+
T Consensus 97 ~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 173 (308)
T cd06634 97 CL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVG 173 (308)
T ss_pred cC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHhEEECCCCcEEECCcccceeecCcccccC
Confidence 96 5787776542 456899999999999999999999999 99999999999999999999999999987666666778
Q ss_pred CCCCCCccccc---cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 220 NLAYTPPEFLR---TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 220 t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
++.|+|||++. ...++.++|||||||++|+|++|..|+........... ..........+...+..+.+||.+
T Consensus 174 ~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~~ 249 (308)
T cd06634 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH----IAQNESPALQSGHWSEYFRNFVDS 249 (308)
T ss_pred CccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHH----HhhcCCCCcCcccccHHHHHHHHH
Confidence 89999999985 35678899999999999999999988754321111110 000111111123466779999999
Q ss_pred hcccCCCCCCCHHHHHHHhhhh
Q 010932 297 CLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
||+.+|++||++.+++.+..-.
T Consensus 250 cl~~~P~~Rp~~~~ll~~~~~~ 271 (308)
T cd06634 250 CLQKIPQDRPTSEVLLKHRFVL 271 (308)
T ss_pred HhhCCcccCCCHHHHhhCcccc
Confidence 9999999999999999874433
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=302.08 Aligned_cols=249 Identities=20% Similarity=0.241 Sum_probs=192.5
Q ss_pred ccccccCCCCCCcEEEEEEEcC---CcEEEEEEccCCC---CCChhHHHHHHHHhccCCCCcceeeeeeeeeC--CceEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLKN---NRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG--DERLL 135 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 135 (497)
+.+++.+|+|+||.||+|.... +..||||.+.... ....+.+.+|+.+++.++||||+++++++... ...++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 4667788999999999999753 7899999998633 23346788999999999999999999999888 78999
Q ss_pred EEEcCCCCChhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC----CCCeeEcccCCc
Q 010932 136 VAQYMPNDTLSKHLFHWD---KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE----DGDPRLSSFGLM 208 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~---~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~----~~~~kl~Dfgla 208 (497)
||||+++ +|.+++.... ...+++..+..++.||+.||.|||+.+ ++||||||+||+++. ++.+||+|||++
T Consensus 82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 82 LFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW-VLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 9999965 6766664321 247899999999999999999999999 999999999999999 999999999998
Q ss_pred cccCCC-------CccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHH-----hc--------
Q 010932 209 KNSRDG-------KSYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVI-----RG-------- 267 (497)
Q Consensus 209 ~~~~~~-------~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~-----~~-------- 267 (497)
...... ....+++.|+|||++.+. .++.++|||||||++|+|++|+.|+........ ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE 239 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence 854322 234567889999988764 578999999999999999999988754322110 00
Q ss_pred ----------------cccccccccccCCCCC---------H--HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 268 ----------------KNLLLLMDSSLEGQYA---------N--EDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 268 ----------------~~~~~~~~~~~~~~~~---------~--~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.......+......++ . ..+..+.+++.+||+.||++|||+.+++.+
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000000000000111 0 244578999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-37 Score=299.04 Aligned_cols=242 Identities=21% Similarity=0.239 Sum_probs=195.3
Q ss_pred ccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC---hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 66 IVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 66 ~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
.+.++|.|+||+||+|... +|..|++|++....... .+.+.+|+++++.++||||+++++++.+....++||||+.
T Consensus 25 ~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 104 (313)
T cd06633 25 GLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL 104 (313)
T ss_pred cceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC
Confidence 3456799999999999975 48999999987543322 3468899999999999999999999999999999999996
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCccccCC
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNL 221 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~gt~ 221 (497)
++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..........++.
T Consensus 105 -~~l~~~l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~ 181 (313)
T cd06633 105 -GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTP 181 (313)
T ss_pred -CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccccc
Confidence 567777654 2457899999999999999999999999 9999999999999999999999999988666556677889
Q ss_pred CCCCccccc---cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhc
Q 010932 222 AYTPPEFLR---TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCL 298 (497)
Q Consensus 222 ~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 298 (497)
.|+|||++. ...++.++|||||||++|+|++|..|+.............. ...........+..+.+|+.+||
T Consensus 182 ~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~~~l 257 (313)
T cd06633 182 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ----NDSPTLQSNEWTDSFRGFVDYCL 257 (313)
T ss_pred cccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh----cCCCCCCccccCHHHHHHHHHHc
Confidence 999999984 45688899999999999999999988754322111111000 00111112234566899999999
Q ss_pred ccCCCCCCCHHHHHHH
Q 010932 299 QYEAKDRPDVKFLLSA 314 (497)
Q Consensus 299 ~~dp~~Rps~~~ll~~ 314 (497)
+.+|.+||++.+++.+
T Consensus 258 ~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 258 QKIPQERPASAELLRH 273 (313)
T ss_pred cCChhhCcCHHHHhcC
Confidence 9999999999999975
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=291.32 Aligned_cols=245 Identities=21% Similarity=0.266 Sum_probs=205.0
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
+.+++.+|.|+||.||++.+. ++..|++|++..... .....+.+|+++++.++|||++++++.+......++|+||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYA 81 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEec
Confidence 456778899999999999975 589999999976543 34567899999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC---
Q 010932 141 PNDTLSKHLFHWD--KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--- 215 (497)
Q Consensus 141 ~~~~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 215 (497)
++++|.+++.... ...+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 160 (258)
T cd08215 82 DGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK-ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA 160 (258)
T ss_pred CCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHHeEEcCCCcEEECCccceeecccCccee
Confidence 9999999987542 478999999999999999999999998 9999999999999999999999999987654432
Q ss_pred -ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHH
Q 010932 216 -SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 216 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 294 (497)
...+++.|+|||.+.+..++.++||||||+++++|++|+.|+............ . .......+...+..+.+++
T Consensus 161 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~i 235 (258)
T cd08215 161 KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKI----L-KGQYPPIPSQYSSELRNLV 235 (258)
T ss_pred cceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHH----h-cCCCCCCCCCCCHHHHHHH
Confidence 345788899999998888999999999999999999999887544322211111 1 1112233445677899999
Q ss_pred HHhcccCCCCCCCHHHHHHH
Q 010932 295 SKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 295 ~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+||..+|++|||+.+++++
T Consensus 236 ~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 236 SSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred HHHcCCChhhCcCHHHHhcC
Confidence 99999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=295.89 Aligned_cols=247 Identities=20% Similarity=0.259 Sum_probs=191.4
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCC-CCcceeeeeeeeeC--CceEEEEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVR-HKRLVNLIGCCAEG--DERLLVAQ 138 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~--~~~~lv~e 138 (497)
+.+++.+|+|+||.||++... +++.||+|+++..... ......+|+.++.++. |+||+++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 356788899999999999975 5899999998754322 2234567899998885 99999999999887 88999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---C
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---K 215 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~ 215 (497)
|++ ++|.+++... ...+++..+..++.||+.||.|||+.+ ++|+||||+||+++. +.+||+|||+++..... .
T Consensus 81 ~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~ 156 (282)
T cd07831 81 LMD-MNLYELIKGR-KRPLPEKRVKSYMYQLLKSLDHMHRNG-IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYT 156 (282)
T ss_pred cCC-ccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEcC-CCeEEEecccccccccCCCcC
Confidence 996 5787777542 357899999999999999999999999 999999999999999 99999999998765332 2
Q ss_pred ccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhc-------cccc---------ccccccc
Q 010932 216 SYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRG-------KNLL---------LLMDSSL 278 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~-------~~~~---------~~~~~~~ 278 (497)
...++..|+|||++.. ..++.++|||||||++|||++|..||+......... .... ...+...
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd07831 157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNF 236 (282)
T ss_pred CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccC
Confidence 3457889999997754 557889999999999999999998876432111000 0000 0000000
Q ss_pred CC-------CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 279 EG-------QYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 279 ~~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.. ......+..+.+|+.+||+.+|++|||+.+++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 00 0112356889999999999999999999999875
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=298.35 Aligned_cols=249 Identities=20% Similarity=0.249 Sum_probs=191.6
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCC-CCcceeeeeeeeeCCc-----eE
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDE-----RL 134 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~-----~~ 134 (497)
+.+.+.||+|+||.||+|.+. +|+.||||++...... ....+.+|+.+++.++ ||||+++++++...+. .+
T Consensus 3 y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~ 82 (295)
T cd07837 3 YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLY 82 (295)
T ss_pred ceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEE
Confidence 456777899999999999976 5899999998654322 2457889999999995 6999999999987665 89
Q ss_pred EEEEcCCCCChhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC-CCCeeEcccCCccc
Q 010932 135 LVAQYMPNDTLSKHLFHWD---KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE-DGDPRLSSFGLMKN 210 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~---~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~~ 210 (497)
+||||+++ +|.+++.... ...+++..+..++.||+.||.|||+.+ ++||||||+||+++. ++.+||+|||++..
T Consensus 83 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 83 LVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG-VMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred EEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEecCCCeEEEeeccccee
Confidence 99999985 7888875432 346899999999999999999999999 999999999999998 89999999999875
Q ss_pred cCCC----CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc-------ccc----
Q 010932 211 SRDG----KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL-------LLM---- 274 (497)
Q Consensus 211 ~~~~----~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~-------~~~---- 274 (497)
.... ....+++.|+|||++.+ ..++.++|||||||++|+|++|..||.............. ...
T Consensus 161 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T cd07837 161 FSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVS 240 (295)
T ss_pred cCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchh
Confidence 4322 22345788999998865 4578999999999999999999988764321110000000 000
Q ss_pred ---c----cccC----CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 275 ---D----SSLE----GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 275 ---~----~~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
. +... ....+..+..+.+||.+||+.||.+|||+.+++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 241 KLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 0000 00112356779999999999999999999999875
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-37 Score=290.00 Aligned_cols=243 Identities=23% Similarity=0.305 Sum_probs=202.6
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
+.+.+.+|+|++|.||++... +++.|++|.+..... ...+.+.+|++++.+++||||+++++++...+..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA 81 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence 456677899999999999976 488999999986654 23567999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC----c
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK----S 216 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 216 (497)
++++|.+++.. ...+++..+..++.|++.||.+||+.+ ++|+||+|+||+++.++.++|+|||++....... .
T Consensus 82 ~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 158 (254)
T cd06627 82 ENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLAYLHEQG-VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDAS 158 (254)
T ss_pred CCCcHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEECCCCCEEEeccccceecCCCcccccc
Confidence 99999999865 367999999999999999999999999 9999999999999999999999999988654433 3
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
..++..|+|||.+.+...+.++||||||+++|+|++|..|+........... .. .......+...+..+.+++.+
T Consensus 159 ~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~i~~ 233 (254)
T cd06627 159 VVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFR----IV-QDDHPPLPEGISPELKDFLMQ 233 (254)
T ss_pred cccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHH----Hh-ccCCCCCCCCCCHHHHHHHHH
Confidence 4678899999999888889999999999999999999987754321111100 00 111223445567789999999
Q ss_pred hcccCCCCCCCHHHHHHH
Q 010932 297 CLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~ 314 (497)
||..+|++|||+.+++.+
T Consensus 234 ~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 234 CFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred HHhCChhhCcCHHHHhcC
Confidence 999999999999999863
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=299.93 Aligned_cols=252 Identities=19% Similarity=0.229 Sum_probs=194.9
Q ss_pred CCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeC--CceE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEG--DERL 134 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~ 134 (497)
+.+.+.+++.||.|+||.||+|... +|+.||+|+++...... ...+.+|+.++++++|+||+++++++... +..+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 4456788888999999999999975 49999999987543222 23567899999999999999999998765 4689
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
+||||+. ++|.+++... ...+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++......
T Consensus 85 lv~e~~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 85 LVMEYCE-QDLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLHENF-IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEEecCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 9999996 4788887542 467999999999999999999999999 999999999999999999999999998865432
Q ss_pred ----CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccc-------ccc---------
Q 010932 215 ----KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNL-------LLL--------- 273 (497)
Q Consensus 215 ----~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~-------~~~--------- 273 (497)
....+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||............. ...
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
T cd07845 162 AKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPL 241 (309)
T ss_pred cCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccc
Confidence 12234678999999875 457899999999999999999998875432211100000 000
Q ss_pred ---c--ccccCCCC---CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 274 ---M--DSSLEGQY---ANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 274 ---~--~~~~~~~~---~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
. ........ ....++.+.++|.+||+.||++|||+.+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 242 VGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred cccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0 00000000 01236678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=300.63 Aligned_cols=240 Identities=22% Similarity=0.243 Sum_probs=187.2
Q ss_pred CCcEEEEEEEc-CCcEEEEEEccCC--CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCChhhhhh
Q 010932 74 APNVVYRGRLK-NNRLVAIKRFSRQ--SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLF 150 (497)
Q Consensus 74 ~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 150 (497)
++|.||.+... +|+.||||++... .....+.+.+|+.+++.++||||+++++++...+..+++|||+++++|.+++.
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~ 91 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK 91 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence 33455555543 5999999998754 22345689999999999999999999999999999999999999999999997
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-----------Ccccc
Q 010932 151 HWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-----------KSYST 219 (497)
Q Consensus 151 ~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----------~~~~g 219 (497)
......+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||.+...... ....+
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~-ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (314)
T cd08216 92 THFPEGLPELAIAFILKDVLNALDYIHSKG-FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVK 170 (314)
T ss_pred HhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccc
Confidence 655567999999999999999999999999 999999999999999999999999987643211 12345
Q ss_pred CCCCCCcccccc--CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc----ccccccc------------------
Q 010932 220 NLAYTPPEFLRT--GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK----NLLLLMD------------------ 275 (497)
Q Consensus 220 t~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~----~~~~~~~------------------ 275 (497)
+..|+|||++.. ..++.++|||||||++|+|++|..||........... .....++
T Consensus 171 ~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
T cd08216 171 NLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSN 250 (314)
T ss_pred cccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccc
Confidence 678999999875 3588999999999999999999988754321111000 0000000
Q ss_pred --c----ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 276 --S----SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 276 --~----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
. ..........+.++.+|+.+||+.||++|||+.+++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 251 EHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred cccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 0 00111223456789999999999999999999999986
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-37 Score=292.29 Aligned_cols=243 Identities=19% Similarity=0.242 Sum_probs=197.5
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC-----CCChhHHHHHHHHhccCCCCcceeeeeeeeeC--CceEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS-----WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG--DERLL 135 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 135 (497)
+.+.+.+|+|+||.||++... +|..||+|.+.... ......+.+|+.++++++||||+++++++.+. ...++
T Consensus 4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (264)
T cd06653 4 WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSI 83 (264)
T ss_pred eeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEE
Confidence 456677899999999999975 48999999875321 11235788999999999999999999998764 45789
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG- 214 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 214 (497)
|+||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||+++.....
T Consensus 84 v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 160 (264)
T cd06653 84 FVEYMPGGSIKDQLKA--YGALTENVTRRYTRQILQGVSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRIQTIC 160 (264)
T ss_pred EEEeCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECcccccccccccc
Confidence 9999999999999865 456899999999999999999999999 999999999999999999999999998754321
Q ss_pred ------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHH
Q 010932 215 ------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288 (497)
Q Consensus 215 ------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (497)
....++..|+|||++.+..++.++|||||||++|+|++|+.||....... .+............+...+.
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~p~~~~~ 236 (264)
T cd06653 161 MSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA----AIFKIATQPTKPMLPDGVSD 236 (264)
T ss_pred ccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH----HHHHHHcCCCCCCCCcccCH
Confidence 23457889999999998889999999999999999999998875431111 11112222223445667778
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+.+++.+||+ +|..|||+.+++.+
T Consensus 237 ~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 237 ACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred HHHHHHHHHhc-CcccCccHHHHhcC
Confidence 89999999999 57999999998875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-37 Score=293.65 Aligned_cols=239 Identities=19% Similarity=0.203 Sum_probs=189.2
Q ss_pred CCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC---hhHHHHHHH---HhccCCCCcceeeeeeeeeCCceEEEEEcCCC
Q 010932 70 SGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD---PHQFVTEAA---GLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142 (497)
Q Consensus 70 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~---~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 142 (497)
||+|+||.||++... +++.||+|++....... ...+..|.. +++...||||+.+++++...+..++||||++|
T Consensus 2 ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g 81 (278)
T cd05606 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG 81 (278)
T ss_pred cccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCC
Confidence 699999999999975 48999999987543221 122444433 44455799999999999999999999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--CccccC
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KSYSTN 220 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~~gt 220 (497)
++|..++.. .+.+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ....|+
T Consensus 82 ~~L~~~l~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 158 (278)
T cd05606 82 GDLHYHLSQ--HGVFSEAEMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 158 (278)
T ss_pred CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCC
Confidence 999998864 467999999999999999999999999 999999999999999999999999998754322 345688
Q ss_pred CCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcc
Q 010932 221 LAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299 (497)
Q Consensus 221 ~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 299 (497)
..|+|||++.++ .++.++|||||||++|+|++|+.||.......... .... ........+...+..+.+++.+||.
T Consensus 159 ~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~--~~~~-~~~~~~~~~~~~s~~~~~li~~~l~ 235 (278)
T cd05606 159 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--IDRM-TLTMAVELPDSFSPELRSLLEGLLQ 235 (278)
T ss_pred cCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHH--HHHH-hhccCCCCCCcCCHHHHHHHHHHhh
Confidence 999999999754 58999999999999999999998875431111000 0000 0111223344457789999999999
Q ss_pred cCCCCCC-----CHHHHHHH
Q 010932 300 YEAKDRP-----DVKFLLSA 314 (497)
Q Consensus 300 ~dp~~Rp-----s~~~ll~~ 314 (497)
.+|.+|| ++.+++++
T Consensus 236 ~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 236 RDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred cCHHhccCCCCCCHHHHHhC
Confidence 9999999 99999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-37 Score=295.63 Aligned_cols=247 Identities=23% Similarity=0.259 Sum_probs=194.5
Q ss_pred cccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCC--CCChhHHHHHHHHhccCCCCcceeeeeeeeeC--CceEEEEEc
Q 010932 65 LIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQS--WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG--DERLLVAQY 139 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~ 139 (497)
.+++.+|.|++|.||+|...+ |+.||+|++.... ......+.+|+.+++.++||||+++++++... ...++|+||
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07840 2 EKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEY 81 (287)
T ss_pred eeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecc
Confidence 567788999999999999764 8999999998653 22345688999999999999999999999888 789999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC----
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK---- 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 215 (497)
+++ +|.+++... ...+++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 82 ~~~-~l~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~-~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (287)
T cd07840 82 MDH-DLTGLLDSP-EVKFTESQIKCYMKQLLEGLQYLHSNG-ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADY 158 (287)
T ss_pred ccc-cHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccc
Confidence 974 888888542 357999999999999999999999999 9999999999999999999999999988654432
Q ss_pred -ccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccc-----------ccccc-------
Q 010932 216 -SYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNL-----------LLLMD------- 275 (497)
Q Consensus 216 -~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~-----------~~~~~------- 275 (497)
...++..|+|||.+.+ ..++.++||||||+++|+|++|+.|+............. ....+
T Consensus 159 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07840 159 TNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENL 238 (287)
T ss_pred cccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhc
Confidence 2345778999998765 457899999999999999999998875432211100000 00000
Q ss_pred -------cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 276 -------SSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 276 -------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
......+...++..+.+++.+||+.+|.+|||+++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 239 KPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred cccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 000000011126789999999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=293.34 Aligned_cols=235 Identities=20% Similarity=0.232 Sum_probs=193.7
Q ss_pred CCCCCCcEEEEEEEcC-CcEEEEEEccCCCC---CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCCh
Q 010932 70 SGDKAPNVVYRGRLKN-NRLVAIKRFSRQSW---PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTL 145 (497)
Q Consensus 70 lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 145 (497)
+|.|+||.||++.+.+ |+.|++|++..... ...+.+.+|++++++++||||+++++.+..+...++|+||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 5899999999999875 99999999975543 2356789999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-----------
Q 010932 146 SKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----------- 214 (497)
Q Consensus 146 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----------- 214 (497)
.+++.. .+.+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~l~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 157 (265)
T cd05579 81 ASLLEN--VGSLDEDVARIYIAEIVLALEYLHSNG-IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE 157 (265)
T ss_pred HHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence 999865 347999999999999999999999999 999999999999999999999999998754322
Q ss_pred -CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHH--HHHHHH
Q 010932 215 -KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANE--DATQLV 291 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~ 291 (497)
....++..|++||.+.....+.++||||||+++|+|++|..|+............ .... ...+.. .+..+.
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~ 231 (265)
T cd05579 158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNI----LNGK--IEWPEDVEVSDEAI 231 (265)
T ss_pred ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----hcCC--cCCCccccCCHHHH
Confidence 1235678899999998888999999999999999999999887544322221111 1101 111222 367899
Q ss_pred HHHHHhcccCCCCCCCH---HHHHH
Q 010932 292 ELASKCLQYEAKDRPDV---KFLLS 313 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps~---~~ll~ 313 (497)
+++.+||+.+|.+|||+ .++++
T Consensus 232 ~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 232 DLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred HHHHHHhcCCHhhcCCCccHHHHhc
Confidence 99999999999999999 55554
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-37 Score=303.57 Aligned_cols=258 Identities=19% Similarity=0.217 Sum_probs=195.8
Q ss_pred HHHHHHHhc-CCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeee
Q 010932 51 LADLRAATN-GFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGC 126 (497)
Q Consensus 51 ~~~~~~~~~-~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~ 126 (497)
.+|+..++. -...+.++..+|+|+||.||+|... +|+.||||++..... .....+.+|+.+++.++||||++++++
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~ 82 (342)
T cd07879 3 REEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDV 82 (342)
T ss_pred hhhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhhe
Confidence 344444442 2245567788899999999999975 589999999875322 123568899999999999999999999
Q ss_pred eeeCC------ceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCe
Q 010932 127 CAEGD------ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDP 200 (497)
Q Consensus 127 ~~~~~------~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~ 200 (497)
+.... ..++|+||+. .+|..++ +..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dlkp~NIll~~~~~~ 156 (342)
T cd07879 83 FTSAVSGDEFQDFYLVMPYMQ-TDLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSAG-IIHRDLKPGNLAVNEDCEL 156 (342)
T ss_pred ecccccCCCCceEEEEecccc-cCHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCE
Confidence 86543 4689999985 4676665 346899999999999999999999999 9999999999999999999
Q ss_pred eEcccCCccccCCC-CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc----------
Q 010932 201 RLSSFGLMKNSRDG-KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK---------- 268 (497)
Q Consensus 201 kl~Dfgla~~~~~~-~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~---------- 268 (497)
+|+|||+++..... ....+++.|+|||.+.+ ..++.++|||||||++|||++|+.||...........
T Consensus 157 kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 236 (342)
T cd07879 157 KILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGP 236 (342)
T ss_pred EEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 99999998765433 23466888999999876 4688999999999999999999998865321110000
Q ss_pred ---------cccccc---ccccCCCC---CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 269 ---------NLLLLM---DSSLEGQY---ANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 269 ---------~~~~~~---~~~~~~~~---~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
...... ........ .+..+..+.+|+.+||+.||++|||+.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 237 EFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH 297 (342)
T ss_pred HHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000 00000000 11245678999999999999999999999976
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=278.83 Aligned_cols=253 Identities=19% Similarity=0.219 Sum_probs=201.8
Q ss_pred CHHHHHHHhcCCCcccccccCCCCCCcEEEEEE-EcCCcEEEEEEccCCCCCChhHHHHHHHHhccCC-CCcceeeeeee
Q 010932 50 VLADLRAATNGFSSELIVSESGDKAPNVVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR-HKRLVNLIGCC 127 (497)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~ 127 (497)
+++|+-+.|.. .||+|+|+.|--++ ..+|..+|||++.+.....+.++.+|++++.+.+ |+||++++.+|
T Consensus 74 ~F~d~YkLt~e--------~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefF 145 (463)
T KOG0607|consen 74 KFEDMYKLTSE--------LLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFF 145 (463)
T ss_pred hHHHHHHhHHH--------HhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHh
Confidence 35555555442 35999999999988 5679999999999887667889999999999995 99999999999
Q ss_pred eeCCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC---CeeEcc
Q 010932 128 AEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG---DPRLSS 204 (497)
Q Consensus 128 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~---~~kl~D 204 (497)
.++..+|||||-+.||+|..+|.. ...+++.++..+...|+.||.|||.+| |.||||||+|||..+.. -|||+|
T Consensus 146 Edd~~FYLVfEKm~GGplLshI~~--~~~F~E~EAs~vvkdia~aLdFlH~kg-IAHRDlKPENiLC~~pn~vsPvKiCD 222 (463)
T KOG0607|consen 146 EDDTRFYLVFEKMRGGPLLSHIQK--RKHFNEREASRVVKDIASALDFLHTKG-IAHRDLKPENILCESPNKVSPVKICD 222 (463)
T ss_pred cccceEEEEEecccCchHHHHHHH--hhhccHHHHHHHHHHHHHHHHHHhhcC-cccccCCccceeecCCCCcCceeeec
Confidence 999999999999999999999976 678999999999999999999999999 99999999999997543 489999
Q ss_pred cCCccccCCC-----------CccccCCCCCCccccc-----cCCCCcccceeehhhhHHHHhhCCCCCCchh-----hH
Q 010932 205 FGLMKNSRDG-----------KSYSTNLAYTPPEFLR-----TGRVIPESVIYSYGTVLLDLLSGKHIPPSHA-----LD 263 (497)
Q Consensus 205 fgla~~~~~~-----------~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~~~~~~~-----~~ 263 (497)
|.+....... .+.+|+..|||||+.. ...|+.++|.||||||||-|++|..||.+.- |+
T Consensus 223 fDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWd 302 (463)
T KOG0607|consen 223 FDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWD 302 (463)
T ss_pred cccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCcc
Confidence 9987532211 2345667899999774 2458999999999999999999999987541 11
Q ss_pred H-----HhccccccccccccCCCCC----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 264 V-----IRGKNLLLLMDSSLEGQYA----NEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 264 ~-----~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
. .-...+.+.+... ..++| ...+.+..++++.+|..|+..|.++..++++
T Consensus 303 rGe~Cr~CQ~~LFesIQEG-kYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 303 RGEVCRVCQNKLFESIQEG-KYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred CCCccHHHHHHHHHHHhcc-CCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 0 0001111111111 11333 3468899999999999999999999888874
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-37 Score=295.56 Aligned_cols=249 Identities=19% Similarity=0.288 Sum_probs=195.7
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
+.+++.+|.|++|.||+|... +|..||||+++..... ....+.+|+.++++++||||+++++++...+..++||||++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (284)
T cd07836 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD 81 (284)
T ss_pred ceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC
Confidence 467788899999999999986 4899999998765332 34567889999999999999999999999999999999997
Q ss_pred CCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----Cc
Q 010932 142 NDTLSKHLFHWD-KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KS 216 (497)
Q Consensus 142 ~~~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 216 (497)
+ +|.+++.... ...+++..+..++.||+.||.|||+.+ ++|+||||+||++++++.++|+|||++...... ..
T Consensus 82 ~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (284)
T cd07836 82 K-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR-VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSN 159 (284)
T ss_pred c-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccccc
Confidence 5 7888775432 356899999999999999999999999 999999999999999999999999998754322 23
Q ss_pred cccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccc-----------ccc-cccCC---
Q 010932 217 YSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLL-----------LMD-SSLEG--- 280 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~-----------~~~-~~~~~--- 280 (497)
..++..|++||.+.+. .++.++|||||||++|+|++|..||............... ... +....
T Consensus 160 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07836 160 EVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFP 239 (284)
T ss_pred ccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhccccc
Confidence 4567889999998654 4688999999999999999999877543221110000000 000 00000
Q ss_pred --------CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 281 --------QYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 281 --------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
...+..+..+.+++.+||+.||.+|||+.+++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 240 RYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred CCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1112346678999999999999999999999864
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=339.04 Aligned_cols=243 Identities=23% Similarity=0.381 Sum_probs=195.7
Q ss_pred ccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCChh
Q 010932 68 SESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLS 146 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 146 (497)
..+|+|+||.||+|... +|..||||++..... ....|++.+++++|||||++++++.+....++||||+++|+|.
T Consensus 696 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~ 771 (968)
T PLN00113 696 NVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLS 771 (968)
T ss_pred cEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHH
Confidence 34599999999999974 689999999875432 1235688999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCccccCCCC
Q 010932 147 KHLFHWDKQPLPWEMRVRVAYYIAQALDHCN---SQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAY 223 (497)
Q Consensus 147 ~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh---~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~gt~~y 223 (497)
++++ .++|..+..|+.||+.||.||| +.+ ++||||||+||+++.++.+++. ||............+|+.|
T Consensus 772 ~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~-iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t~~y 844 (968)
T PLN00113 772 EVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPA-VVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISSAY 844 (968)
T ss_pred HHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCC-eecCCCCHHhEEECCCCceEEE-eccccccccCCCccccccc
Confidence 9984 3899999999999999999999 556 9999999999999999888875 6665544444445678999
Q ss_pred CCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhh----------HHHhccccccccccccCC--CCCHHHHHHHH
Q 010932 224 TPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHAL----------DVIRGKNLLLLMDSSLEG--QYANEDATQLV 291 (497)
Q Consensus 224 ~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~----------~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~ 291 (497)
||||++.+..++.++|||||||++|||+||+.|+..... ...........+++.... ..+.....++.
T Consensus 845 ~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (968)
T PLN00113 845 VAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVM 924 (968)
T ss_pred cCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHH
Confidence 999999999999999999999999999999988742210 000111122233333322 23345566788
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 292 ELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
+++.+||+.||++|||+.++++.|+.+.+.
T Consensus 925 ~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 925 NLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred HHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 999999999999999999999999988653
|
|
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-37 Score=290.22 Aligned_cols=245 Identities=19% Similarity=0.254 Sum_probs=203.4
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
+.+.+.+|.|+||.||++... +++.+++|.+..... .....+.+|+++++.++|+||+++++++......++|+||+
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYA 81 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhc
Confidence 456778899999999999865 588999999875432 22456889999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--Cc
Q 010932 141 PNDTLSKHLFHWD--KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KS 216 (497)
Q Consensus 141 ~~~~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~ 216 (497)
++++|..++.... ...+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...... ..
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~-i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~ 160 (256)
T cd08530 82 PFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK-ILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKT 160 (256)
T ss_pred CCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEEecCCcEEEeeccchhhhccCCccc
Confidence 9999999886522 357899999999999999999999999 999999999999999999999999998765433 23
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
..+++.|++||.+.+..++.++|+||||+++|+|++|+.|+........... .........+...+.++.+++.+
T Consensus 161 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~li~~ 235 (256)
T cd08530 161 QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYK-----VQRGKYPPIPPIYSQDLQNFIRS 235 (256)
T ss_pred ccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-----HhcCCCCCCchhhCHHHHHHHHH
Confidence 4577899999999988899999999999999999999988754432221111 11122223445677889999999
Q ss_pred hcccCCCCCCCHHHHHHH
Q 010932 297 CLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~ 314 (497)
||+.+|++|||+.+++++
T Consensus 236 ~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 236 MLQVKPKLRPNCDKILAS 253 (256)
T ss_pred HcCCCcccCCCHHHHhcC
Confidence 999999999999999875
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-37 Score=302.95 Aligned_cols=248 Identities=19% Similarity=0.257 Sum_probs=194.5
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC--CCChhHHHHHHHHhccCCCCcceeeeeeeeeC-----CceE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS--WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG-----DERL 134 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~ 134 (497)
.+.+++.+|.|+||+||++... +|+.||||.+.... ......+.+|+.+++.++||||+++++++... ...+
T Consensus 6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 85 (337)
T cd07858 6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVY 85 (337)
T ss_pred ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEE
Confidence 4567778899999999999975 58999999987532 22345678899999999999999999988654 3579
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
+|+||+. ++|.+++.. .+.+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||+++.....
T Consensus 86 lv~e~~~-~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 161 (337)
T cd07858 86 IVYELMD-TDLHQIIRS--SQTLSDDHCQYFLYQLLRGLKYIHSAN-VLHRDLKPSNLLLNANCDLKICDFGLARTTSEK 161 (337)
T ss_pred EEEeCCC-CCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence 9999995 688888864 467999999999999999999999999 999999999999999999999999998865433
Q ss_pred ----CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHh-------------------cccc
Q 010932 215 ----KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIR-------------------GKNL 270 (497)
Q Consensus 215 ----~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~-------------------~~~~ 270 (497)
....++..|+|||.+.. ..++.++|||||||++|+|++|+.||......... ....
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07858 162 GDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA 241 (337)
T ss_pred cccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhh
Confidence 23456889999998865 46899999999999999999999887543211000 0000
Q ss_pred cccc---ccccC---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 271 LLLM---DSSLE---GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 271 ~~~~---~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
...+ ..... ....+..+..+.+++.+||+.+|++|||+.+++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 242 RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 0000 00000 00112356779999999999999999999999997
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-39 Score=283.95 Aligned_cols=246 Identities=19% Similarity=0.245 Sum_probs=192.6
Q ss_pred cccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCC-CChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 67 VSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSW-PDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 67 ~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
++.+|.|+||+|++-.++. |+..|||.++.... .+.++++.|.+...+- +.||||+++|.+...+..||.||.|+ .
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-~ 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-I 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-h
Confidence 4667999999999999874 99999999986544 3456889998876544 79999999999999999999999994 5
Q ss_pred Chhhhh---hcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---Ccc
Q 010932 144 TLSKHL---FHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---KSY 217 (497)
Q Consensus 144 ~L~~~l---~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~ 217 (497)
||..+. +.-....+++...-.|..-.+.||.||-..-+|||||+||+|||++..|.+||||||++-..... +.-
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~d 227 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVD 227 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhc
Confidence 565443 33345678999999999999999999987766999999999999999999999999998754433 234
Q ss_pred ccCCCCCCcccccc--CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccc-cCCC-CCHHHHHHHHHH
Q 010932 218 STNLAYTPPEFLRT--GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSS-LEGQ-YANEDATQLVEL 293 (497)
Q Consensus 218 ~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~l~~l 293 (497)
.|...|||||.+.. ..|+.+|||||||++|+|+.||..|+..+..-. ..-...-.-++. +... -..+.+..+..+
T Consensus 228 aGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svf-eql~~Vv~gdpp~l~~~~~~~~~s~~~~~f 306 (361)
T KOG1006|consen 228 AGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVF-EQLCQVVIGDPPILLFDKECVHYSFSMVRF 306 (361)
T ss_pred cCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHH-HHHHHHHcCCCCeecCcccccccCHHHHHH
Confidence 67789999999964 348999999999999999999998877654311 111111111111 1111 113467789999
Q ss_pred HHHhcccCCCCCCCHHHHHHH
Q 010932 294 ASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 294 i~~cl~~dp~~Rps~~~ll~~ 314 (497)
|..||.+|-..||...+++++
T Consensus 307 intCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 307 INTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred HHHHhhcccccCcchhhhhcC
Confidence 999999999999999999875
|
|
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-37 Score=302.70 Aligned_cols=247 Identities=21% Similarity=0.265 Sum_probs=191.5
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeC-----CceEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG-----DERLL 135 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~l 135 (497)
.+.+++.+|+|+||.||+|.+. +|+.||||++..... .....+.+|+.++++++||||+++++++... ...++
T Consensus 6 ~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 85 (336)
T cd07849 6 RYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYI 85 (336)
T ss_pred ceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEE
Confidence 4567888899999999999975 589999999864322 2345688999999999999999999987554 35799
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG- 214 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 214 (497)
|+||+. ++|...+. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.++|+|||++......
T Consensus 86 v~e~~~-~~l~~~~~---~~~l~~~~~~~i~~ql~~aL~~LH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 160 (336)
T cd07849 86 VQELME-TDLYKLIK---TQHLSNDHIQYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH 160 (336)
T ss_pred Eehhcc-cCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence 999996 57877774 457999999999999999999999999 999999999999999999999999998754322
Q ss_pred ------CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHh-------c----ccccccccc
Q 010932 215 ------KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIR-------G----KNLLLLMDS 276 (497)
Q Consensus 215 ------~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~-------~----~~~~~~~~~ 276 (497)
....+|+.|+|||.+.+ ..++.++|||||||++|+|++|+.||......... . .....+...
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (336)
T cd07849 161 DHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISL 240 (336)
T ss_pred cccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhch
Confidence 12457889999998765 46889999999999999999999887543211000 0 000000000
Q ss_pred ---------ccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 277 ---------SLEGQY-----ANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 277 ---------~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
...... .+..+..+.+++.+||+.+|++|||+.+++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 241 RARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred hhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000 11235679999999999999999999999997
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-37 Score=295.80 Aligned_cols=250 Identities=18% Similarity=0.275 Sum_probs=194.8
Q ss_pred CCCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCC-ChhHHHHHHHHhccCC-CCcceeeeeeeeeCCceEEE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv 136 (497)
+++.+.+++.+|+|+||.||+|.+++ ++.||||.++..... ....+.+|+.++.+.. ||||+++++++......++|
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 34556778889999999999999875 899999999754332 2345777887776665 99999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCcccccCCCcceEeCCCCCeeEcccCCccccCCCC
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQ-NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK 215 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 215 (497)
|||+. ++|.+++... ...+++..+..++.+|+.||.|||+. + ++||||+|+||+++.++.++|+|||++.......
T Consensus 93 ~e~~~-~~l~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~-i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~ 169 (296)
T cd06618 93 MELMS-TCLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLKEKHG-VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK 169 (296)
T ss_pred eeccC-cCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhCC-EecCCCcHHHEEEcCCCCEEECccccchhccCCC
Confidence 99985 5677766442 45799999999999999999999974 6 9999999999999999999999999987543322
Q ss_pred ---ccccCCCCCCccccccCC----CCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccccccccc-CCCCCHHHH
Q 010932 216 ---SYSTNLAYTPPEFLRTGR----VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSL-EGQYANEDA 287 (497)
Q Consensus 216 ---~~~gt~~y~aPE~~~~~~----~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 287 (497)
...++..|+|||.+.+.. ++.++||||||+++|+|++|+.||........ .......... ........+
T Consensus 170 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 246 (296)
T cd06618 170 AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFE---VLTKILQEEPPSLPPNEGFS 246 (296)
T ss_pred cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHH---HHHHHhcCCCCCCCCCCCCC
Confidence 234677899999987554 78899999999999999999988754221110 0011111110 011112356
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010932 288 TQLVELASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 288 ~~l~~li~~cl~~dp~~Rps~~~ll~~l 315 (497)
..+.+|+.+||+.||++|||+.+++.+-
T Consensus 247 ~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 247 PDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 7799999999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=291.90 Aligned_cols=248 Identities=22% Similarity=0.255 Sum_probs=193.1
Q ss_pred cccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCC--hhHHHHHHHHhccC---CCCcceeeeeeeeeCCc-----e
Q 010932 65 LIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPD--PHQFVTEAAGLGNV---RHKRLVNLIGCCAEGDE-----R 133 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~-----~ 133 (497)
.+++.+|.|+||.||+|.++. ++.||||+++...... ...+.+|+.+++++ +||||+++++++..... .
T Consensus 2 ~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~ 81 (287)
T cd07838 2 EELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKL 81 (287)
T ss_pred eEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCcee
Confidence 466778999999999999875 8999999997443222 34566788777666 59999999999988776 8
Q ss_pred EEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC
Q 010932 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD 213 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 213 (497)
+++|||+. ++|.+++.......+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 ~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~-i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~ 159 (287)
T cd07838 82 TLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR-IVHRDLKPQNILVTSDGQVKIADFGLARIYSF 159 (287)
T ss_pred EEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhEEEccCCCEEEeccCcceeccC
Confidence 99999996 57988886644457999999999999999999999999 99999999999999999999999999876543
Q ss_pred C---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc------------------c
Q 010932 214 G---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL------------------L 272 (497)
Q Consensus 214 ~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~------------------~ 272 (497)
. ....++..|+|||++.+..++.++|||||||++|+|++|..|+.............. .
T Consensus 160 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (287)
T cd07838 160 EMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRS 239 (287)
T ss_pred CcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchh
Confidence 3 233467889999999988899999999999999999999877654321111000000 0
Q ss_pred ccccccC---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 273 LMDSSLE---GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 273 ~~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
....... ....+..+..+.+++.+||+.||.+||++.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 240 SFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred hcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 0000000 11112346778999999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=294.54 Aligned_cols=248 Identities=10% Similarity=0.066 Sum_probs=182.0
Q ss_pred CcccccccCCCCCCcEEEEEEEcC----CcEEEEEEccCCCCCC-h----------hHHHHHHHHhccCCCCcceeeeee
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN----NRLVAIKRFSRQSWPD-P----------HQFVTEAAGLGNVRHKRLVNLIGC 126 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~-~----------~~~~~e~~~l~~l~h~niv~~~~~ 126 (497)
..+.+.+.||+|+||+||+|.+.+ +..+|+|+........ . .....+...+..+.|+||++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 467788899999999999999754 4567777643322111 0 112233445667789999999997
Q ss_pred eeeCC----ceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeE
Q 010932 127 CAEGD----ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRL 202 (497)
Q Consensus 127 ~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl 202 (497)
+.... ..+++++++. .++.+.+.. ....++..+..++.|++.||.|||+++ ++||||||+|||++.++.++|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiHrDiKp~Nill~~~~~~~l 167 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV-ENTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEHG-ISHGDIKPENIMVDGNNRGYI 167 (294)
T ss_pred eeEecCCceEEEEEEehhc-cCHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCcEEE
Confidence 65543 3467788763 456666543 234678889999999999999999999 999999999999999999999
Q ss_pred cccCCccccCC-----------CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhH-H-Hhc--
Q 010932 203 SSFGLMKNSRD-----------GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALD-V-IRG-- 267 (497)
Q Consensus 203 ~Dfgla~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~-~-~~~-- 267 (497)
+|||+++.... .....||+.|+|||++.+..++.++|||||||++|||++|..||...... . ...
T Consensus 168 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~ 247 (294)
T PHA02882 168 IDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAK 247 (294)
T ss_pred EEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhH
Confidence 99999875421 12246899999999999999999999999999999999999888544211 1 100
Q ss_pred cccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010932 268 KNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l 315 (497)
......+... ......++..+.+++..||+.+|++||++.++++.|
T Consensus 248 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 248 CDFIKRLHEG--KIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHHHHhhhh--hhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 0011111110 001223467899999999999999999999999875
|
|
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-37 Score=294.79 Aligned_cols=247 Identities=23% Similarity=0.303 Sum_probs=197.2
Q ss_pred cccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 65 LIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
.+++.+|.|++|.||++... +|+.+++|.+...... ....+.+|++++++++|+||+++++++..+...++|+||++
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 81 (283)
T cd05118 2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD 81 (283)
T ss_pred ccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccC
Confidence 46678899999999999975 5899999998755333 34678899999999999999999999999999999999997
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC----cc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK----SY 217 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~ 217 (497)
+ +|.+++... ...+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||.+....... ..
T Consensus 82 ~-~l~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~ 158 (283)
T cd05118 82 T-DLYKLIKDR-QRGLPESLIKSYLYQLLQGLAFCHSHG-ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHY 158 (283)
T ss_pred C-CHHHHHHhh-cccCCHHHHHHHHHHHHHHHHHHHHCC-eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCc
Confidence 5 888877553 368999999999999999999999999 9999999999999999999999999987654432 34
Q ss_pred ccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccc-----------ccccc----------
Q 010932 218 STNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNL-----------LLLMD---------- 275 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~-----------~~~~~---------- 275 (497)
.++..|+|||.+.+. .++.++||||||+++|+|+||+.||+............ ....+
T Consensus 159 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd05118 159 VVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFP 238 (283)
T ss_pred cCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhc
Confidence 567889999999876 78999999999999999999998775432211000000 00000
Q ss_pred c---ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 276 S---SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 276 ~---~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
. .......+..+..+.++|.+||+.||.+||++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 239 KKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred cccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0 00001123456789999999999999999999999874
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=296.08 Aligned_cols=251 Identities=20% Similarity=0.246 Sum_probs=190.4
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeCC------
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD------ 131 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 131 (497)
.+.+.+++.+|.|+||.||++... +++.||||.+...... ....+.+|+.++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 345678888999999999999976 4899999998643322 2345678999999999999999999987654
Q ss_pred --ceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 132 --ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 132 --~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
..++||||+. ++|.+.+... ...+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++.
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNK-NVKFTLSEIKKVMKMLLNGLYYIHRNK-ILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 3599999996 5788877542 347899999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCCC--------ccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhc------ccc-ccc
Q 010932 210 NSRDGK--------SYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRG------KNL-LLL 273 (497)
Q Consensus 210 ~~~~~~--------~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~------~~~-~~~ 273 (497)
...... ...++..|+|||.+.+. .++.++||||||+++|+|++|+.|+.......... ... ...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (310)
T cd07865 168 AFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEV 247 (310)
T ss_pred cccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 543221 23457789999988764 47889999999999999999998775432111000 000 000
Q ss_pred ---------ccc-ccCCC----C-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 274 ---------MDS-SLEGQ----Y-----ANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 274 ---------~~~-~~~~~----~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+. ..... . +...+..+.+||.+||+.||.+|||+.+++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 248 WPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred cccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 000 00000 0 00123567899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-37 Score=301.93 Aligned_cols=247 Identities=22% Similarity=0.281 Sum_probs=197.8
Q ss_pred ccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCC--CCChhHHHHHHHHhccCCCCcceeeeeeeeeCC-----ceEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQS--WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD-----ERLL 135 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~l 135 (497)
+.+.+.+|.|++|.||+|.... |+.||||++.... ....+.+.+|+.+++.++||||+++++++.... ..++
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l 81 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI 81 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence 4667788999999999999764 8999999987643 333567999999999999999999999987765 7899
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK 215 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 215 (497)
||||++ ++|.+++.. ...+++..+..++.+|+.||.|||+.+ ++|+||||+|||++.++.++|+|||++.......
T Consensus 82 v~e~~~-~~l~~~l~~--~~~l~~~~~~~i~~~l~~~l~~LH~~g-i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~ 157 (330)
T cd07834 82 VTELME-TDLHKVIKS--PQPLTDDHIQYFLYQILRGLKYLHSAN-VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDE 157 (330)
T ss_pred Eecchh-hhHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccCceEeecccc
Confidence 999997 578888864 458999999999999999999999999 9999999999999999999999999988654432
Q ss_pred -------ccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccc------------------
Q 010932 216 -------SYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKN------------------ 269 (497)
Q Consensus 216 -------~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~------------------ 269 (497)
...+++.|+|||++.+. .++.++||||||+++|+|++|+.||............
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 237 (330)
T cd07834 158 DEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSE 237 (330)
T ss_pred cccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhcccc
Confidence 34568889999999887 7899999999999999999999887654321110000
Q ss_pred -cccccc---ccc---CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 270 -LLLLMD---SSL---EGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 270 -~~~~~~---~~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
....+. ... .....+..+..+.+++.+||+.+|.+|||+.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 238 KARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred chhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 000000 000 000112246779999999999999999999999986
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-37 Score=301.45 Aligned_cols=248 Identities=19% Similarity=0.255 Sum_probs=193.3
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeee----CCceEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAE----GDERLL 135 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~l 135 (497)
.+.+.+.||.|+||.||+|... +|..||+|++..... .....+.+|+.+|+.++||||+++++++.. ....++
T Consensus 6 ~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 85 (334)
T cd07855 6 RYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYV 85 (334)
T ss_pred ceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEE
Confidence 3456677899999999999975 499999999875422 234578889999999999999999998753 346899
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG- 214 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 214 (497)
||||+. ++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 86 v~e~~~-~~l~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 161 (334)
T cd07855 86 VMDLME-SDLHHIIHS--DQPLTEEHIRYFLYQLLRGLKYIHSAN-VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSP 161 (334)
T ss_pred EEehhh-hhHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEecccccceeecccC
Confidence 999995 689888854 456999999999999999999999999 999999999999999999999999998754321
Q ss_pred -------CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHh-------------------c
Q 010932 215 -------KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIR-------------------G 267 (497)
Q Consensus 215 -------~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~-------------------~ 267 (497)
....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||......... .
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 241 (334)
T cd07855 162 TEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGS 241 (334)
T ss_pred cCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhch
Confidence 12357889999999865 45889999999999999999999888543211100 0
Q ss_pred ccccccccc-ccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 268 KNLLLLMDS-SLEGQY-----ANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 268 ~~~~~~~~~-~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..+....+. ...... .+..+..+.+++.+||+.+|++|||+.+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 242 DRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 000000000 000011 12346789999999999999999999999986
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=292.73 Aligned_cols=248 Identities=21% Similarity=0.319 Sum_probs=194.8
Q ss_pred cccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCC-ChhHHHHHHHHhccCC-CCcceeeeeeeeeCCceEEEEEcCC
Q 010932 65 LIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
.+++.||.|++|+||+|...+ ++.|+||++...... ......+|+..+.+++ ||||+++++++..++..++||||+
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~- 80 (283)
T cd07830 2 KVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM- 80 (283)
T ss_pred eeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-
Confidence 466778999999999999864 889999998754322 2334567999999999 999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---Cccc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---KSYS 218 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~ 218 (497)
+++|.+++.......+++..+..++.|++.+|.|||+++ ++|+||+|+||+++.++.++|+|||++...... ....
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 159 (283)
T cd07830 81 EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG-FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYV 159 (283)
T ss_pred CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCC
Confidence 789999887644457899999999999999999999999 999999999999999999999999998865443 2345
Q ss_pred cCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhc-----------------cccccccccccC-
Q 010932 219 TNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRG-----------------KNLLLLMDSSLE- 279 (497)
Q Consensus 219 gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~- 279 (497)
++..|+|||++.. ..++.++||||||+++++|++|+.||+......... .......+....
T Consensus 160 ~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T cd07830 160 STRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQ 239 (283)
T ss_pred CcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccc
Confidence 7889999998854 457899999999999999999998775432111000 000000000000
Q ss_pred ------CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 280 ------GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 280 ------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
....+..+..+.+++.+||+.||++|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 240 FAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred cccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 00011224679999999999999999999999874
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-37 Score=293.62 Aligned_cols=243 Identities=20% Similarity=0.228 Sum_probs=201.0
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC---CChhHHHHHHHHhccCC-CCcceeeeeeeeeCCceEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW---PDPHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 137 (497)
+|.+.+.+|.|+||.||++..+ +|..||+|++..... .....+.+|+.++.+++ ||||+++++++..++..++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 4567778899999999999976 599999999875322 22356889999999998 999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC--
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK-- 215 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 215 (497)
|++++++|.+++.. .+.+++..+..++.|++.||.+||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~l~~--~~~l~~~~~~~i~~ql~~~l~~Lh~~~-~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 82 EYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALEYLHSKG-IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred cCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 99999999999965 457999999999999999999999999 9999999999999999999999999987543221
Q ss_pred ----------------------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccc
Q 010932 216 ----------------------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLL 273 (497)
Q Consensus 216 ----------------------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~ 273 (497)
...++..|+|||++.+..++.++||||||++++++++|+.|+......... ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~----~~~ 234 (280)
T cd05581 159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTF----QKI 234 (280)
T ss_pred ccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHH----HHH
Confidence 234578899999998888999999999999999999999887543211110 111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH----HHHHHH
Q 010932 274 MDSSLEGQYANEDATQLVELASKCLQYEAKDRPDV----KFLLSA 314 (497)
Q Consensus 274 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~----~~ll~~ 314 (497)
. .....++...++.+.+|+.+||+.+|.+|||+ ++++++
T Consensus 235 ~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 235 L--KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred H--hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 1 11223445567789999999999999999999 888764
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=294.21 Aligned_cols=246 Identities=20% Similarity=0.251 Sum_probs=195.6
Q ss_pred ccccccCCCCCCcEEEEEEEc----CCcEEEEEEccCCCC----CChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceE
Q 010932 64 ELIVSESGDKAPNVVYRGRLK----NNRLVAIKRFSRQSW----PDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 134 (497)
+.+.+.+|.|+||.||++... +|..||+|++..... ...+.+.+|+.++..+ +|+||+.+++++..+...+
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 456778899999999999863 588999999875322 2246788999999999 5999999999999988999
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
+|+||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||+|+|||++.++.++|+|||++......
T Consensus 82 lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 82 LILDYINGGELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence 99999999999999865 457899999999999999999999999 999999999999999999999999998754332
Q ss_pred -----CccccCCCCCCccccccC--CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHH
Q 010932 215 -----KSYSTNLAYTPPEFLRTG--RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287 (497)
Q Consensus 215 -----~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (497)
....++..|+|||.+.+. .++.++||||||+++|+|++|..|+......... ..+...+.. ....++...+
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~ 236 (290)
T cd05613 159 EVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQ-AEISRRILK-SEPPYPQEMS 236 (290)
T ss_pred cccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccH-HHHHHHhhc-cCCCCCccCC
Confidence 134578899999998753 4678999999999999999999887432110000 000000000 1123344567
Q ss_pred HHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 010932 288 TQLVELASKCLQYEAKDRP-----DVKFLLSA 314 (497)
Q Consensus 288 ~~l~~li~~cl~~dp~~Rp-----s~~~ll~~ 314 (497)
..+.+++.+||+.||++|| ++.+++.+
T Consensus 237 ~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 237 ALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 7899999999999999997 77777775
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=300.18 Aligned_cols=247 Identities=21% Similarity=0.274 Sum_probs=191.0
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC--CCChhHHHHHHHHhccC-CCCcceeeeeeeeeC--CceEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS--WPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEG--DERLLV 136 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~--~~~~lv 136 (497)
.+.+.+.+|.|+||.||+|.+. +|+.||||++.... ......+.+|+.+++++ +||||+++++++... ...++|
T Consensus 8 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv 87 (337)
T cd07852 8 KYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLV 87 (337)
T ss_pred HHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEE
Confidence 3456677899999999999976 48899999886432 22345678899999999 999999999998653 468999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 214 (497)
|||++ ++|..++.. ..+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~-i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~ 162 (337)
T cd07852 88 FEYME-TDLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSGN-VIHRDLKPSNILLNSDCRVKLADFGLARSLSELEE 162 (337)
T ss_pred ecccc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccchhccccccc
Confidence 99996 589888854 37899999999999999999999999 999999999999999999999999998754322
Q ss_pred -------CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc------------------
Q 010932 215 -------KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK------------------ 268 (497)
Q Consensus 215 -------~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~------------------ 268 (497)
....+|..|+|||.+.+ ..++.++|||||||++|+|+||+.||...........
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (337)
T cd07852 163 NPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKS 242 (337)
T ss_pred cccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHh
Confidence 12457889999998865 4578899999999999999999988754321110000
Q ss_pred -cccccccc---cc---CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 269 -NLLLLMDS---SL---EGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 269 -~~~~~~~~---~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.....++. .. .....+..+..+.+++.+||+.||++|||+.+++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 243 PFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred hhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00000000 00 001112246789999999999999999999999985
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-37 Score=293.86 Aligned_cols=240 Identities=23% Similarity=0.254 Sum_probs=198.9
Q ss_pred cCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCCh
Q 010932 69 ESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTL 145 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 145 (497)
.||+|-||+||-|.++ +|+.||||++.+-... ...++.+|+.+|.+++||.||.+-..|.+.+..++|||-+.|.-|
T Consensus 571 vLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GDML 650 (888)
T KOG4236|consen 571 VLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDML 650 (888)
T ss_pred hccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcchHH
Confidence 4699999999999976 5999999999765433 346799999999999999999999999999999999999965555
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC---CCCeeEcccCCccccCCC---Ccccc
Q 010932 146 SKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE---DGDPRLSSFGLMKNSRDG---KSYST 219 (497)
Q Consensus 146 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~~~---~~~~g 219 (497)
. .|...+.+.+++.....++.||+.||.|||.++ |+|+||||+|||+.+ .-.+||||||+|+..... ++..|
T Consensus 651 E-MILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn-IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVG 728 (888)
T KOG4236|consen 651 E-MILSSEKGRLPERITKFLVTQILVALRYLHFKN-IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVG 728 (888)
T ss_pred H-HHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc-eeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcC
Confidence 4 444556889999999999999999999999999 999999999999964 347999999999987654 57889
Q ss_pred CCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcc
Q 010932 220 NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299 (497)
Q Consensus 220 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 299 (497)
||.|+|||+++...|+..-|+||+||++|--++|..||..+. .+... + +............+.+..+.+||..+|+
T Consensus 729 TPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE--dIndQ-I-QNAaFMyPp~PW~eis~~AidlIn~LLq 804 (888)
T KOG4236|consen 729 TPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE--DINDQ-I-QNAAFMYPPNPWSEISPEAIDLINNLLQ 804 (888)
T ss_pred CccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc--chhHH-h-hccccccCCCchhhcCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998874431 11111 0 0011111223345677889999999999
Q ss_pred cCCCCCCCHHHHHHH
Q 010932 300 YEAKDRPDVKFLLSA 314 (497)
Q Consensus 300 ~dp~~Rps~~~ll~~ 314 (497)
..-.+|.|....+.+
T Consensus 805 Vkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 805 VKMRKRYSVDKSLSH 819 (888)
T ss_pred HHHHHhcchHhhccc
Confidence 999999999887775
|
|
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=292.99 Aligned_cols=249 Identities=20% Similarity=0.240 Sum_probs=196.1
Q ss_pred ccccccCCCCCCcEEEEEEEc----CCcEEEEEEccCCCC----CChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceE
Q 010932 64 ELIVSESGDKAPNVVYRGRLK----NNRLVAIKRFSRQSW----PDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 134 (497)
+.+.+.||.|++|.||++... ++..||||+++.... ...+.+.+|+.++.++ +||||+++++.+..+...+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 456778899999999999853 478899999874321 2245688999999999 5999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
+||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++.....
T Consensus 82 lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~-~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 82 LILDYVNGGELFTHLYQ--REHFTESEVRVYIAEIVLALDHLHQLG-IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEecCCCCcHHHHHhh--cCCcCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence 99999999999999864 457899999999999999999999998 999999999999999999999999998754332
Q ss_pred C-----ccccCCCCCCccccccCC--CCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHH
Q 010932 215 K-----SYSTNLAYTPPEFLRTGR--VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287 (497)
Q Consensus 215 ~-----~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (497)
. ...++..|+|||.+.+.. .+.++||||||+++|+|++|..|+................... ....+...+
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (288)
T cd05583 159 EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS--KPPFPKTMS 236 (288)
T ss_pred cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc--CCCCCcccC
Confidence 1 235788999999987655 7889999999999999999998874321110000000011111 122344456
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHhhh
Q 010932 288 TQLVELASKCLQYEAKDRPDVKFLLSAVAP 317 (497)
Q Consensus 288 ~~l~~li~~cl~~dp~~Rps~~~ll~~l~~ 317 (497)
..+.+++.+||+.||++|||+.++...|+.
T Consensus 237 ~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 237 AEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred HHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 779999999999999999998777665544
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=300.63 Aligned_cols=248 Identities=17% Similarity=0.199 Sum_probs=191.7
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeC----------
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG---------- 130 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~---------- 130 (497)
..+.+++.||.|+||.||+|... +|..||+|++........+.+.+|+++++.++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 35677888999999999999975 4899999999766555567799999999999999999999876543
Q ss_pred ----CceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC-CCCCeeEccc
Q 010932 131 ----DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD-EDGDPRLSSF 205 (497)
Q Consensus 131 ----~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~-~~~~~kl~Df 205 (497)
...++||||++ ++|.+++. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++ .++.++|+||
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCceEEECCc
Confidence 35789999996 58888774 356899999999999999999999999 99999999999998 4567899999
Q ss_pred CCccccCCC-------CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccc-------
Q 010932 206 GLMKNSRDG-------KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNL------- 270 (497)
Q Consensus 206 gla~~~~~~-------~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~------- 270 (497)
|+++..... ....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.............
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 239 (342)
T cd07854 160 GLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVR 239 (342)
T ss_pred ccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 998754321 12346788999998754 557889999999999999999999885432111000000
Q ss_pred -----------ccccc-cccCCC-----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 271 -----------LLLMD-SSLEGQ-----YANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 271 -----------~~~~~-~~~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..... ...... ..+..+.++.+|+.+||+.||.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 240 EEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred hHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 00000 000000 112345678999999999999999999999985
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=287.74 Aligned_cols=237 Identities=20% Similarity=0.253 Sum_probs=200.4
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCC---CChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSW---PDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 136 (497)
++.+++..||+|+||+|.++..++ .+.+|||++++.-. .+.+--+.|-++|.-. +-|.+++++.+|++-+.+|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 345677888999999999999765 78999999987532 2223345566666655 578999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC----
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR---- 212 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~---- 212 (497)
|||+.||+|--++.. -+.+.++.+..++.+|+-||-+||++| ||.||||.+|||+|.+|++||+|||+++...
T Consensus 429 MEyvnGGDLMyhiQQ--~GkFKEp~AvFYAaEiaigLFFLh~kg-IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~ 505 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQ--VGKFKEPVAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGV 505 (683)
T ss_pred EEEecCchhhhHHHH--hcccCCchhhhhhHHHHHHhhhhhcCC-eeeeeccccceEeccCCceEeeecccccccccCCc
Confidence 999999999888865 578899999999999999999999999 9999999999999999999999999998532
Q ss_pred CCCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 213 DGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 213 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
..++++|||.|+|||++...+|...+|+|||||+||||+.|+.||.+...+.+.. .+.+.. -.+|...+.++.+
T Consensus 506 TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~----aI~ehn--vsyPKslSkEAv~ 579 (683)
T KOG0696|consen 506 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQ----AIMEHN--VSYPKSLSKEAVA 579 (683)
T ss_pred ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH----HHHHcc--CcCcccccHHHHH
Confidence 2357899999999999999999999999999999999999999998775554432 233332 2567888999999
Q ss_pred HHHHhcccCCCCCCC
Q 010932 293 LASKCLQYEAKDRPD 307 (497)
Q Consensus 293 li~~cl~~dp~~Rps 307 (497)
++...|.+.|.+|..
T Consensus 580 ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 580 ICKGLLTKHPGKRLG 594 (683)
T ss_pred HHHHHhhcCCccccC
Confidence 999999999999963
|
|
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=297.87 Aligned_cols=243 Identities=19% Similarity=0.217 Sum_probs=190.1
Q ss_pred ccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--------------hhHHHHHHHHhccCCCCcceeeeeeeeeCCc
Q 010932 68 SESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--------------PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 132 (497)
+.||.|+||+||+|... +++.||||++....... ...+.+|+++++.++||||+++++++...+.
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 94 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDF 94 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCCc
Confidence 45899999999999975 58999999986543221 1247899999999999999999999999999
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
.++||||+. ++|.+++.. ...+++.....++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....
T Consensus 95 ~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~~-i~H~dl~~~nill~~~~~~kl~dfg~~~~~~ 170 (335)
T PTZ00024 95 INLVMDIMA-SDLKKVVDR--KIRLTESQVKCILLQILNGLNVLHKWY-FMHRDLSPANIFINSKGICKIADFGLARRYG 170 (335)
T ss_pred EEEEEeccc-cCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHeEECCCCCEEECCccceeecc
Confidence 999999996 689888854 457899999999999999999999999 9999999999999999999999999987543
Q ss_pred CC------------------CccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccc----
Q 010932 213 DG------------------KSYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKN---- 269 (497)
Q Consensus 213 ~~------------------~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~---- 269 (497)
.. ....+++.|+|||.+.+. .++.++|||||||++|+|++|..|+............
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~ 250 (335)
T PTZ00024 171 YPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELL 250 (335)
T ss_pred cccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 10 122356789999998764 4688999999999999999999887544221110000
Q ss_pred -------ccccc--------ccccC---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 270 -------LLLLM--------DSSLE---GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 270 -------~~~~~--------~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..... ..... .......+..+.+++.+||+.+|++|||+.+++.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 251 GTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred CCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 00000 00000 00112245678999999999999999999999985
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-37 Score=303.66 Aligned_cols=192 Identities=25% Similarity=0.326 Sum_probs=168.0
Q ss_pred cccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCC------ceEEEEE
Q 010932 67 VSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD------ERLLVAQ 138 (497)
Q Consensus 67 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~~~lv~e 138 (497)
-..||+|+||.||+|+++ +|+.||||.++.... ...+...+|+++|++++|||||+++++=.+.. ...+|||
T Consensus 18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmE 97 (732)
T KOG4250|consen 18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVME 97 (732)
T ss_pred hhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEe
Confidence 345799999999999965 599999999987543 34678999999999999999999998765543 5789999
Q ss_pred cCCCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC--CCC--CeeEcccCCccccCC
Q 010932 139 YMPNDTLSKHLFHWD-KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD--EDG--DPRLSSFGLMKNSRD 213 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~--~~~--~~kl~Dfgla~~~~~ 213 (497)
||.||+|...+...+ ..+|++...+.++..++.||.|||++| |+||||||.||++- .+| .-||+|||.|+...+
T Consensus 98 yC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~-IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d 176 (732)
T KOG4250|consen 98 YCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG-IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDD 176 (732)
T ss_pred ecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC-ceeccCCCCcEEEeecCCCceEEeeecccccccCCC
Confidence 999999999997643 358999999999999999999999999 99999999999994 334 479999999998776
Q ss_pred CC---ccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCc
Q 010932 214 GK---SYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPS 259 (497)
Q Consensus 214 ~~---~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~ 259 (497)
.. +..||..|.+||.... +.|+..+|.|||||++|+.+||..||-.
T Consensus 177 ~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 177 NSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred CCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 64 6789999999999984 8899999999999999999999999844
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-37 Score=302.14 Aligned_cols=240 Identities=18% Similarity=0.203 Sum_probs=199.1
Q ss_pred CCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 137 (497)
.+..+.+..++|.|+|+.|-.+.+. +++..++|++.... .+..+|+.++... .||||+++.+++.++.+.|+||
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 3567777788999999999999975 48899999998652 2345677666555 6999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEe-CCCCCeeEcccCCccccCCC-C
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF-DEDGDPRLSSFGLMKNSRDG-K 215 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill-~~~~~~kl~Dfgla~~~~~~-~ 215 (497)
|.+.|+-|.+.+.. .+.+. ..+..|+.+|+.++.|||++| +|||||||+|||+ ++.|+++|+|||.++..... .
T Consensus 396 e~l~g~ell~ri~~--~~~~~-~e~~~w~~~lv~Av~~LH~~g-vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~ 471 (612)
T KOG0603|consen 396 ELLDGGELLRRIRS--KPEFC-SEASQWAAELVSAVDYLHEQG-VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCD 471 (612)
T ss_pred hhccccHHHHHHHh--cchhH-HHHHHHHHHHHHHHHHHHhcC-eeecCCChhheeecCCCCcEEEEEechhhhCchhhc
Confidence 99999988887754 23333 777889999999999999999 9999999999999 69999999999999876655 2
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
+.+-|..|.|||++....+++.+||||||++||+|++|+.||...... ..+......+.+....+..+++|+.
T Consensus 472 tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-------~ei~~~i~~~~~s~~vS~~AKdLl~ 544 (612)
T KOG0603|consen 472 TPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-------IEIHTRIQMPKFSECVSDEAKDLLQ 544 (612)
T ss_pred ccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-------HHHHHhhcCCccccccCHHHHHHHH
Confidence 335678899999999999999999999999999999999988655433 1122222233444678889999999
Q ss_pred HhcccCCCCCCCHHHHHHH
Q 010932 296 KCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~ 314 (497)
+||+.||.+||++.+++.+
T Consensus 545 ~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 545 QLLQVDPALRLGADEIGAH 563 (612)
T ss_pred HhccCChhhCcChhhhccC
Confidence 9999999999999999986
|
|
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=292.16 Aligned_cols=248 Identities=22% Similarity=0.274 Sum_probs=190.9
Q ss_pred cccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeCC--------
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD-------- 131 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-------- 131 (497)
.+.+.+.+|.|+||.||+|.++. |+.||||+++.... .....+.+|+++++.++||||+++++++.+..
T Consensus 8 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~ 87 (302)
T cd07864 8 KFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKD 87 (302)
T ss_pred hhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhcccc
Confidence 34566778999999999999864 89999999975432 22356788999999999999999999987654
Q ss_pred --ceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 132 --ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 132 --~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
..++|+||+++ +|...+... ...+++..+..++.||+.||.|||+.+ ++|+||||+||++++++.+||+|||++.
T Consensus 88 ~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~~ 164 (302)
T cd07864 88 KGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKN-FLHRDIKCSNILLNNKGQIKLADFGLAR 164 (302)
T ss_pred CCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCcEEeCcccccc
Confidence 78999999976 676766542 457999999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCCC-----ccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHh-------ccccc----c
Q 010932 210 NSRDGK-----SYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIR-------GKNLL----L 272 (497)
Q Consensus 210 ~~~~~~-----~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~-------~~~~~----~ 272 (497)
...... ...++..|+|||.+.+ ..++.++|||||||++|+|++|+.|+......... ..... .
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (302)
T cd07864 165 LYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPD 244 (302)
T ss_pred cccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccc
Confidence 644322 1234678999998865 34788999999999999999999777532211000 00000 0
Q ss_pred cc--------cc------ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 273 LM--------DS------SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 273 ~~--------~~------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+. +. ... ......+..+.+++.+||+.||.+|||+.+++.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 245 VIKLPYFNTMKPKKQYRRRLR-EEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred ccccccccccccccccccchh-hhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 00 000 0011246789999999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-36 Score=283.64 Aligned_cols=236 Identities=23% Similarity=0.266 Sum_probs=196.2
Q ss_pred CCCCCCcEEEEEEEcC-CcEEEEEEccCCCCC---ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCCh
Q 010932 70 SGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWP---DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTL 145 (497)
Q Consensus 70 lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 145 (497)
+|.|+||.||++...+ ++.||+|++...... ....+..|+.+++.++||||+++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 5899999999999764 899999998765432 245789999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----CccccCC
Q 010932 146 SKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KSYSTNL 221 (497)
Q Consensus 146 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~gt~ 221 (497)
.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++.
T Consensus 81 ~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lh~~~-~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 157 (250)
T cd05123 81 FSHLSK--EGRFSEERARFYAAEIVLALEYLHSLG-IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTP 157 (250)
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCc
Confidence 999965 347899999999999999999999999 999999999999999999999999998765432 3456788
Q ss_pred CCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccC
Q 010932 222 AYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYE 301 (497)
Q Consensus 222 ~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 301 (497)
.|++||.+.+...+.++|+||||+++|+|++|..|+........... ... ....++...+..+.+++.+||..|
T Consensus 158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~----~~~--~~~~~~~~~~~~l~~~i~~~l~~~ 231 (250)
T cd05123 158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEK----ILK--DPLRFPEFLSPEARDLISGLLQKD 231 (250)
T ss_pred cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHH----Hhc--CCCCCCCCCCHHHHHHHHHHhcCC
Confidence 99999999888889999999999999999999988754432111111 111 112344445778999999999999
Q ss_pred CCCCCCH---HHHHHH
Q 010932 302 AKDRPDV---KFLLSA 314 (497)
Q Consensus 302 p~~Rps~---~~ll~~ 314 (497)
|++|||+ .+++++
T Consensus 232 p~~R~~~~~~~~l~~~ 247 (250)
T cd05123 232 PTKRLGSGGAEEIKAH 247 (250)
T ss_pred HhhCCCcccHHHHHhC
Confidence 9999999 566543
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=286.26 Aligned_cols=244 Identities=16% Similarity=0.181 Sum_probs=195.6
Q ss_pred ccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCC-----CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSW-----PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
|.+.+.+|+|+||+||++.+.. +..+++|+++.... ....++..|+.+++.++||||+++++++.+....++|+
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT 81 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence 4567788999999999999754 55566666654221 22346778999999999999999999999989999999
Q ss_pred EcCCCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-
Q 010932 138 QYMPNDTLSKHLFH--WDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 214 (497)
||+++++|.+++.. .....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++. +.++|+|||++......
T Consensus 82 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~ 159 (260)
T cd08222 82 EYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR-ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC 159 (260)
T ss_pred EeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC-ccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence 99999999988854 23467999999999999999999999999 999999999999975 56999999998754332
Q ss_pred ---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHH
Q 010932 215 ---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291 (497)
Q Consensus 215 ---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (497)
....+++.|+|||.+.+..++.++||||||+++|+|++|..|+........... .. .......+...+.++.
T Consensus 160 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~ 234 (260)
T cd08222 160 DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLR----IV-EGPTPSLPETYSRQLN 234 (260)
T ss_pred ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHH----HH-cCCCCCCcchhcHHHH
Confidence 234578899999999888889999999999999999999988754322111111 11 1112233456678899
Q ss_pred HHHHHhcccCCCCCCCHHHHHHH
Q 010932 292 ELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+++.+||+.+|++||++.+++++
T Consensus 235 ~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 235 SIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred HHHHHHhcCChhhCcCHHHHhhC
Confidence 99999999999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=288.58 Aligned_cols=254 Identities=22% Similarity=0.330 Sum_probs=195.7
Q ss_pred cccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhcc--CCCCcceeeeeeeeeCC----ceEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGN--VRHKRLVNLIGCCAEGD----ERLLV 136 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~----~~~lv 136 (497)
.-+++..+|+|.||.||+|.+. ++.||||++.... .+.|..|-.+.+- +.|+||++++++-..+. ..+||
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~~---kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQE---KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred chhhHHHhhcCccceeehhhcc-CceeEEEecCHHH---HHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 3455667799999999999995 6999999997543 4568777777654 47999999999876655 78999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC--------CCcccccCCCcceEeCCCCCeeEcccCCc
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQ--------NRKLYHDLNAYRVLFDEDGDPRLSSFGLM 208 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~--------~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 208 (497)
++|.+.|+|.++|. ...++|....+|+..+++||+|||+. .+|+|||||+.||||.+++++.|+|||+|
T Consensus 287 t~fh~kGsL~dyL~---~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLK---ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred eeeccCCcHHHHHH---hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 99999999999995 57899999999999999999999972 34999999999999999999999999999
Q ss_pred cccCCCC------ccccCCCCCCccccccCC-CC-----cccceeehhhhHHHHhhCCCCC-------CchhhH-HHhc-
Q 010932 209 KNSRDGK------SYSTNLAYTPPEFLRTGR-VI-----PESVIYSYGTVLLDLLSGKHIP-------PSHALD-VIRG- 267 (497)
Q Consensus 209 ~~~~~~~------~~~gt~~y~aPE~~~~~~-~~-----~~~Dv~slG~~l~elltg~~~~-------~~~~~~-~~~~- 267 (497)
.....+. ..+||.+|||||++.+.- +. .+.||||+|.|||||++...-. +....+ .+..
T Consensus 364 l~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~h 443 (534)
T KOG3653|consen 364 LRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNH 443 (534)
T ss_pred EEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCC
Confidence 8655432 367999999999997532 22 3689999999999999865321 111111 0000
Q ss_pred ---cccc-cccccccCCCCCHH-----HHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcccc
Q 010932 268 ---KNLL-LLMDSSLEGQYANE-----DATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323 (497)
Q Consensus 268 ---~~~~-~~~~~~~~~~~~~~-----~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~ 323 (497)
..+. .++....++.++.. ....+.+.+..||..||+.|.|+.=+-+++..+....+
T Consensus 444 Pt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 444 PTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred CCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 0111 12233344444433 35679999999999999999999999998888765544
|
|
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-36 Score=287.39 Aligned_cols=247 Identities=24% Similarity=0.289 Sum_probs=195.1
Q ss_pred cccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCC--CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 65 LIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQS--WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
.+++.+|+|.+|.||+|...+ ++.||+|++.... ....+.+..|+.+++.++|+||+++++++......++|+||++
T Consensus 2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 81 (282)
T cd07829 2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD 81 (282)
T ss_pred eeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC
Confidence 345678999999999999764 9999999998653 2224578899999999999999999999999999999999997
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC----cc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK----SY 217 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~ 217 (497)
++|.+++... ...+++..+..++.+++.||.|||+.+ ++|+||+|+||++++++.++|+|||++....... ..
T Consensus 82 -~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (282)
T cd07829 82 -MDLKKYLDKR-PGPLSPNLIKSIMYQLLRGLAYCHSHR-ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHE 158 (282)
T ss_pred -cCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChheEEEcCCCCEEEecCCcccccCCCccccCcc
Confidence 5899999653 257999999999999999999999999 9999999999999999999999999987644322 23
Q ss_pred ccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc-----------------cc---cccccc
Q 010932 218 STNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK-----------------NL---LLLMDS 276 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~-----------------~~---~~~~~~ 276 (497)
.++..|+|||.+.+. .++.++|||||||++|||++|+.||........... .. ......
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (282)
T cd07829 159 VVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPK 238 (282)
T ss_pred ccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccc
Confidence 446789999998776 789999999999999999999877754321111000 00 000000
Q ss_pred cc---CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 277 SL---EGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 277 ~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.. .....+..+..+.+++.+||+.||++||++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 239 FPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 00 000011235679999999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=282.10 Aligned_cols=218 Identities=20% Similarity=0.226 Sum_probs=178.7
Q ss_pred CCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCChhhhhhc
Q 010932 73 KAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFH 151 (497)
Q Consensus 73 G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 151 (497)
|.+|.||++.+. +|+.||+|++.... .+.+|...+....||||+++++++...+..++||||+++++|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 789999999975 58999999997643 233455555566799999999999999999999999999999999865
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-CccccCCCCCCccccc
Q 010932 152 WDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-KSYSTNLAYTPPEFLR 230 (497)
Q Consensus 152 ~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~gt~~y~aPE~~~ 230 (497)
...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++++|||.+...... ....++..|+|||.+.
T Consensus 79 --~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~ 155 (237)
T cd05576 79 --FLNIPEECVKRWAAEMVVALDALHREG-IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGG 155 (237)
T ss_pred --hcCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccC
Confidence 456999999999999999999999999 999999999999999999999999987654432 2344567899999998
Q ss_pred cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 010932 231 TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDV 308 (497)
Q Consensus 231 ~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 308 (497)
+..++.++||||+||++|||++|..|+...... .........+...++.+.+++.+||+.||++|||+
T Consensus 156 ~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 156 ISEETEACDWWSLGAILFELLTGKTLVECHPSG----------INTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCcchhhcCchh----------cccccccCCcccCCHHHHHHHHHHccCCHHHhcCC
Confidence 888999999999999999999999765322111 00011112344567789999999999999999986
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-36 Score=297.16 Aligned_cols=248 Identities=18% Similarity=0.188 Sum_probs=193.7
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeCC------c
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD------E 132 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~ 132 (497)
..|.+++.||+|+||.||++... +|..||||++...... ....+.+|+.+|+.++||||+++++++.... .
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07880 15 DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHD 94 (343)
T ss_pred cceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccce
Confidence 34677888999999999999965 5999999998643222 2356889999999999999999999987653 3
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
.++||||+ +++|..++. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++....
T Consensus 95 ~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~g-i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~ 169 (343)
T cd07880 95 FYLVMPFM-GTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQTD 169 (343)
T ss_pred EEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccccccc
Confidence 58999998 788988874 357999999999999999999999999 9999999999999999999999999988654
Q ss_pred CC-CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccc-------------------cc
Q 010932 213 DG-KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKN-------------------LL 271 (497)
Q Consensus 213 ~~-~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~-------------------~~ 271 (497)
.. ....+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||............ ..
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (343)
T cd07880 170 SEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAK 249 (343)
T ss_pred cCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHH
Confidence 33 23467889999999876 45889999999999999999999887543211100000 00
Q ss_pred cc---ccccc---CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 272 LL---MDSSL---EGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 272 ~~---~~~~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.. +.... ........+..+.+++.+||+.||++|||+.+++.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 250 NYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred HHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 00000 000112345678999999999999999999999974
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=291.83 Aligned_cols=246 Identities=21% Similarity=0.277 Sum_probs=192.3
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC--CCChhHHHHHHHHhccCCCCcceeeeeeeee-CCceEEEEEc
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS--WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE-GDERLLVAQY 139 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~ 139 (497)
|.+++.||.|+||.||++... +|+.||||++.... ....+.+.+|+.+++.++||||+++++++.. ....++|+||
T Consensus 12 y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~ 91 (328)
T cd07856 12 YVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTEL 91 (328)
T ss_pred eEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeeh
Confidence 456777899999999999965 59999999886432 2234678899999999999999999999865 4678999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-Cccc
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-KSYS 218 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~ 218 (497)
+ +++|..++. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....
T Consensus 92 ~-~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~-iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 166 (328)
T cd07856 92 L-GTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSAG-VVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYV 166 (328)
T ss_pred h-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEeECCCCCEEeCccccccccCCCcCCCc
Confidence 8 678988874 356888999999999999999999999 999999999999999999999999998754433 3345
Q ss_pred cCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHh-------c------------ccccccc-ccc
Q 010932 219 TNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIR-------G------------KNLLLLM-DSS 277 (497)
Q Consensus 219 gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~-------~------------~~~~~~~-~~~ 277 (497)
++..|+|||.+.+ ..++.++|||||||++|+|++|+.||+........ . ....... ...
T Consensus 167 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (328)
T cd07856 167 STRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLP 246 (328)
T ss_pred ccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhcc
Confidence 6788999999876 56899999999999999999999887543211000 0 0000000 000
Q ss_pred cCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 278 LEGQYA-----NEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 278 ~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.....+ +..+..+.++|.+||+.+|++|||+.+++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 247 KREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred ccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 001111 2245789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-36 Score=296.65 Aligned_cols=256 Identities=19% Similarity=0.215 Sum_probs=195.8
Q ss_pred HHHHHHHhcCCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeee
Q 010932 51 LADLRAATNGFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCC 127 (497)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~ 127 (497)
..++...+++| .+++.||+|+||.||++... +|+.||+|++..... ...+.+.+|+.++++++||||+++++++
T Consensus 9 ~~~~~~~~~~y---~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~ 85 (345)
T cd07877 9 NKTIWEVPERY---QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVF 85 (345)
T ss_pred HHHHhhccCce---EEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeee
Confidence 34444555554 56778899999999999864 589999999875322 2245688999999999999999999988
Q ss_pred eeC------CceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCee
Q 010932 128 AEG------DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201 (497)
Q Consensus 128 ~~~------~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~k 201 (497)
... ...+++++++ +++|.+++.. ..+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++
T Consensus 86 ~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~k 160 (345)
T cd07877 86 TPARSLEEFNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELK 160 (345)
T ss_pred eecccccccccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEcCCCCEE
Confidence 643 3467888876 8899888743 46899999999999999999999999 99999999999999999999
Q ss_pred EcccCCccccCCC-CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc-------cccc
Q 010932 202 LSSFGLMKNSRDG-KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK-------NLLL 272 (497)
Q Consensus 202 l~Dfgla~~~~~~-~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~-------~~~~ 272 (497)
|+|||++...... ....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||+.......... ....
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 240 (345)
T cd07877 161 ILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 240 (345)
T ss_pred EecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 9999998865443 23567889999999876 5688999999999999999999988754321110000 0000
Q ss_pred c---------------cccccCC---CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 273 L---------------MDSSLEG---QYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 273 ~---------------~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
. +...... ......+..+.+|+.+||+.||.+|||+.+++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 241 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0 0000000 0001235678999999999999999999999986
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-36 Score=291.97 Aligned_cols=251 Identities=21% Similarity=0.238 Sum_probs=190.1
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCC------
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGD------ 131 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 131 (497)
...+.+++.||.|+||.||+|.++ +++.||||++......+ ...+.+|+++++.++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 356678888999999999999976 48999999986543222 346789999999999999999999875433
Q ss_pred --ceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 132 --ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 132 --~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
..++|+||+.+ +|...+.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHENH-ILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECcCccch
Confidence 46999999964 67766643 2457999999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCCC---------------ccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc-----
Q 010932 210 NSRDGK---------------SYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK----- 268 (497)
Q Consensus 210 ~~~~~~---------------~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~----- 268 (497)
...... ...+++.|+|||.+.+. .++.++|||||||++|+|++|+.||...........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~ 243 (311)
T cd07866 164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLC 243 (311)
T ss_pred hccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 543221 12356789999988654 578999999999999999999987754321110000
Q ss_pred ------------ccccccccccCCCCC-------HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 269 ------------NLLLLMDSSLEGQYA-------NEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 269 ------------~~~~~~~~~~~~~~~-------~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+....+.......+ ......+.+++.+||+.||.+|||+.+++.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 244 GTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred CCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 000000000000011 1123578899999999999999999999874
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-36 Score=317.42 Aligned_cols=146 Identities=26% Similarity=0.313 Sum_probs=131.3
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC---hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
+..|.+++.||.|+||+||+|.+. +++.||||+++...... ...+..|+.++..++||||+++++++......+||
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 456788899999999999999986 58999999997543322 35788999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
|||+++++|.+++.. .+.+++..++.|+.||+.||.|||.++ |+||||||+|||++.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~--~~~l~~~~~~~i~~qil~aL~yLH~~g-IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHI--YGYFDEEMAVKYISEVALALDYLHRHG-IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999999865 457899999999999999999999998 9999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=281.59 Aligned_cols=250 Identities=16% Similarity=0.186 Sum_probs=199.3
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCC--CC----cceeeeeeeeeCCceE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR--HK----RLVNLIGCCAEGDERL 134 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--h~----niv~~~~~~~~~~~~~ 134 (497)
..+.+++.+|+|+||.|-.+.++. +..||||+++.-.. -.+..+-|+++|.++. -| .+|.+.++|.-.++.|
T Consensus 89 ~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiC 167 (415)
T KOG0671|consen 89 NRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHIC 167 (415)
T ss_pred cceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceE
Confidence 356788899999999999999764 89999999986432 3466788999999993 23 3788889999999999
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC------------------
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE------------------ 196 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~------------------ 196 (497)
||+|.+ |-|+.+++....-.+++...++.++.|++.+++|||+.+ ++|.||||+|||+.+
T Consensus 168 ivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k-l~HTDLKPENILfvss~~~~~~~~k~~~~~~r~ 245 (415)
T KOG0671|consen 168 IVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK-LTHTDLKPENILFVSSEYFKTYNPKKKVCFIRP 245 (415)
T ss_pred EEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc-eeecCCChheEEEeccceEEEeccCCccceecc
Confidence 999998 779999998766778999999999999999999999999 999999999999942
Q ss_pred --CCCeeEcccCCccccCCC-CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHH-------Hh
Q 010932 197 --DGDPRLSSFGLMKNSRDG-KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDV-------IR 266 (497)
Q Consensus 197 --~~~~kl~Dfgla~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~-------~~ 266 (497)
+..++|+|||.|+..... ...+.|..|.|||++.+-.++.++||||+||||+|++||..+|+.+.... +.
T Consensus 246 ~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIl 325 (415)
T KOG0671|consen 246 LKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERIL 325 (415)
T ss_pred CCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhh
Confidence 235899999999876554 45678999999999999999999999999999999999999887653111 00
Q ss_pred ccccccccccc-----------------cCC----------------CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 010932 267 GKNLLLLMDSS-----------------LEG----------------QYANEDATQLVELASKCLQYEAKDRPDVKFLLS 313 (497)
Q Consensus 267 ~~~~~~~~~~~-----------------~~~----------------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~ 313 (497)
+..-..++... ... .........+.+|+++||..||.+|+|+.|+|.
T Consensus 326 Gp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 326 GPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred CCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence 00000000000 000 001223456999999999999999999999998
Q ss_pred H
Q 010932 314 A 314 (497)
Q Consensus 314 ~ 314 (497)
+
T Consensus 406 H 406 (415)
T KOG0671|consen 406 H 406 (415)
T ss_pred C
Confidence 5
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-36 Score=280.30 Aligned_cols=250 Identities=19% Similarity=0.248 Sum_probs=193.1
Q ss_pred ccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccC--CCCcceeeeeeeeeCC----ceEEEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNV--RHKRLVNLIGCCAEGD----ERLLVA 137 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~~~~~----~~~lv~ 137 (497)
-.+++.+|+|.||.||+|.|+ |+.||||++.... .+.+.+|.++.+.+ +|+||+.+++.-..++ .+|||+
T Consensus 213 I~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvT 288 (513)
T KOG2052|consen 213 IVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVT 288 (513)
T ss_pred eEEEEEecCccccceeecccc-CCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEee
Confidence 456778899999999999996 8999999997543 45688888888655 9999999998765443 589999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-------CCcccccCCCcceEeCCCCCeeEcccCCccc
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQ-------NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN 210 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~-------~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 210 (497)
+|.+.|||.++|. ...++....++++..++.||+|||.. ..|.|||||+.||||..+|.+-|+|+|||..
T Consensus 289 dYHe~GSL~DyL~---r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~ 365 (513)
T KOG2052|consen 289 DYHEHGSLYDYLN---RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 365 (513)
T ss_pred ecccCCcHHHHHh---hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEE
Confidence 9999999999995 47899999999999999999999962 2489999999999999999999999999975
Q ss_pred cCCC--------CccccCCCCCCccccccC----CC--CcccceeehhhhHHHHhhCC----------CCCCchhhHHHh
Q 010932 211 SRDG--------KSYSTNLAYTPPEFLRTG----RV--IPESVIYSYGTVLLDLLSGK----------HIPPSHALDVIR 266 (497)
Q Consensus 211 ~~~~--------~~~~gt~~y~aPE~~~~~----~~--~~~~Dv~slG~~l~elltg~----------~~~~~~~~~~~~ 266 (497)
.... ...+||-.|||||++... .+ -..+||||||+|+||++-.. .||.........
T Consensus 366 h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs 445 (513)
T KOG2052|consen 366 HDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPS 445 (513)
T ss_pred ecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCC
Confidence 4433 356899999999999742 12 23699999999999997532 233322111111
Q ss_pred ccccccc-cccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 267 GKNLLLL-MDSSLEGQYA-----NEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 267 ~~~~~~~-~~~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
...+..+ ....+++.+| ......+.++++.||..||..|.|+--+-+.|.++.+
T Consensus 446 ~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 446 FEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred HHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 1111111 1222233333 3456778999999999999999999888888887764
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=297.64 Aligned_cols=248 Identities=21% Similarity=0.231 Sum_probs=194.8
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC--CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCc------
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS--WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE------ 132 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~------ 132 (497)
+.+.+++.||.|++|.||+|... +++.||||++.... ....+.+.+|+.+++.++||||+++++++.....
T Consensus 15 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07851 15 DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQD 94 (343)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccccc
Confidence 45677888999999999999976 48899999986532 2234567889999999999999999998866554
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
.++|+||+ +++|.+++.. ..+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++....
T Consensus 95 ~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nill~~~~~~kL~dfg~~~~~~ 169 (343)
T cd07851 95 VYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAG-IIHRDLKPSNIAVNEDCELKILDFGLARHTD 169 (343)
T ss_pred EEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEcccccccccc
Confidence 89999998 6799998853 57999999999999999999999999 9999999999999999999999999988654
Q ss_pred CC-CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc-------cc----------
Q 010932 213 DG-KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL-------LL---------- 273 (497)
Q Consensus 213 ~~-~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~-------~~---------- 273 (497)
.. ....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||+............. .+
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 249 (343)
T cd07851 170 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESAR 249 (343)
T ss_pred ccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHH
Confidence 33 34567889999999865 3678999999999999999999988764322111000000 00
Q ss_pred -----cccccCCC---CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 274 -----MDSSLEGQ---YANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 274 -----~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+....... .....+..+.+++.+||+.||++|||+.+|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 250 NYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 00000000 011236789999999999999999999999975
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=303.05 Aligned_cols=251 Identities=20% Similarity=0.267 Sum_probs=211.7
Q ss_pred cccccCCCCCCcEEEEEEEc-C----CcEEEEEEccCCC-CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 65 LIVSESGDKAPNVVYRGRLK-N----NRLVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~-~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
+.++.||+|+||+||+|.|- . .-+||||++.... ......++.|+-.|.++.|||+++++|+|.... ..||++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 45567899999999999962 3 3479999986543 334678999999999999999999999998765 789999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCcc-
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSY- 217 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~- 217 (497)
|+++|+|.++++.+ +..+-....+.|..||++||.|||.+. +|||||-..||||..-..+||.|||+++........
T Consensus 778 ~mP~G~LlDyvr~h-r~~igsq~lLnw~~QIAkgM~YLe~qr-lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey 855 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREH-RDNIGSQDLLNWCYQIAKGMKYLEEQR-LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY 855 (1177)
T ss_pred hcccchHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhcc-hhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence 99999999999874 678889999999999999999999998 999999999999999999999999999977655322
Q ss_pred -----ccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHH
Q 010932 218 -----STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291 (497)
Q Consensus 218 -----~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (497)
...+.|||-|.++...++.++|||||||++||++| |..|..+...+ .+..++....+...|+.++.++.
T Consensus 856 ~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~-----eI~dlle~geRLsqPpiCtiDVy 930 (1177)
T KOG1025|consen 856 SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE-----EIPDLLEKGERLSQPPICTIDVY 930 (1177)
T ss_pred cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH-----HhhHHHhccccCCCCCCccHHHH
Confidence 12467999999999999999999999999999998 66666554333 33444444555567888999999
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHhhhhhcccc
Q 010932 292 ELASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~ 323 (497)
.++.+||..|+..||+++++...+.++.+.+.
T Consensus 931 ~~mvkCwmid~~~rp~fkel~~~fs~~ardpq 962 (1177)
T KOG1025|consen 931 MVMVKCWMIDADSRPTFKELAEEFSRMARDPQ 962 (1177)
T ss_pred HHHHHHhccCcccCccHHHHHHHHHHHhcCcc
Confidence 99999999999999999999999888765543
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=291.13 Aligned_cols=247 Identities=20% Similarity=0.207 Sum_probs=188.5
Q ss_pred ccccccCCCCCCcEEEEEEEc-C--CcEEEEEEccCCCC--CChhHHHHHHHHhccC-CCCcceeeeeeeeeC----Cce
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-N--NRLVAIKRFSRQSW--PDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEG----DER 133 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~--~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~----~~~ 133 (497)
+.+.+.||.|+||.||++... . +..||||++..... ...+.+.+|+.+++++ .||||+++++.+... ...
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 456677899999999999975 3 77999999875322 2245788999999999 599999999875432 457
Q ss_pred EEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC
Q 010932 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD 213 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 213 (497)
+++++|+. ++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.++|+|||+++....
T Consensus 82 ~~~~e~~~-~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~ 157 (332)
T cd07857 82 YLYEELME-ADLHQIIRS--GQPLTDAHFQSFIYQILCGLKYIHSAN-VLHRDLKPGNLLVNADCELKICDFGLARGFSE 157 (332)
T ss_pred EEEEeccc-CCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHeEEcCCCCEEeCcCCCceeccc
Confidence 88889885 689888854 567999999999999999999999999 99999999999999999999999999875432
Q ss_pred C--------CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhc-----------------
Q 010932 214 G--------KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRG----------------- 267 (497)
Q Consensus 214 ~--------~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~----------------- 267 (497)
. ....||+.|+|||++.+ ..++.++|||||||++|+|++|..||..........
T Consensus 158 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T cd07857 158 NPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRI 237 (332)
T ss_pred ccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 1 22457889999998865 468999999999999999999998775432110000
Q ss_pred --cccc---cccccccC---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 268 --KNLL---LLMDSSLE---GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 268 --~~~~---~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.... ........ ....+..+..+.+|+.+||+.||++|||+.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 238 GSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred hhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000 00000000 00111235679999999999999999999999875
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-36 Score=249.59 Aligned_cols=248 Identities=21% Similarity=0.273 Sum_probs=195.2
Q ss_pred ccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 64 ELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
+....+||+|.||+||+++.++ ++.||+|.++-... ......++|+-+|+.+.|.|||+++++...+..+.+|+|||
T Consensus 4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c 83 (292)
T KOG0662|consen 4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83 (292)
T ss_pred hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence 3445678999999999999654 99999999875433 23567899999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC----c
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK----S 216 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 216 (497)
. .+|..+... -.+.++...+.+++.|+++||.|+|+++ ++|||+||.|.||+.+|.+||+|||+++-..-.- .
T Consensus 84 d-qdlkkyfds-lng~~d~~~~rsfmlqllrgl~fchshn-vlhrdlkpqnllin~ngelkladfglarafgipvrcysa 160 (292)
T KOG0662|consen 84 D-QDLKKYFDS-LNGDLDPEIVRSFMLQLLRGLGFCHSHN-VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSA 160 (292)
T ss_pred h-HHHHHHHHh-cCCcCCHHHHHHHHHHHHhhhhhhhhhh-hhhccCCcceEEeccCCcEEecccchhhhcCCceEeeec
Confidence 5 568777644 3678999999999999999999999999 9999999999999999999999999999765442 2
Q ss_pred cccCCCCCCccccccCC-CCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccc--------------cccccccccCC
Q 010932 217 YSTNLAYTPPEFLRTGR-VIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKN--------------LLLLMDSSLEG 280 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~ 280 (497)
...|.+|.+|.++.+.+ |+...|+||-||++.|+.. |++.|++...+....+. +..+-|....+
T Consensus 161 evvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp 240 (292)
T KOG0662|consen 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYP 240 (292)
T ss_pred eeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccC
Confidence 35689999999998754 7899999999999999986 55556654322211111 11111111111
Q ss_pred CCC---------HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 281 QYA---------NEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 281 ~~~---------~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
-++ +.....-.+++++.|.-+|..|.+++..+++
T Consensus 241 ~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 241 IYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 122 2233456789999999999999999998874
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=313.25 Aligned_cols=240 Identities=19% Similarity=0.223 Sum_probs=180.8
Q ss_pred cccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC-CCChhHHHHHHHHhccCCCCcceeeeeeeeeC------------
Q 010932 65 LIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG------------ 130 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------------ 130 (497)
..+..||+|+||.||+++.+ ||+.||||+|.-.. ......+.+|+.+|.+|+|||||+++..|.+.
T Consensus 482 EEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~ 561 (1351)
T KOG1035|consen 482 EELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVAS 561 (1351)
T ss_pred HHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccccccc
Confidence 44556699999999999976 79999999997653 22235689999999999999999987532100
Q ss_pred --------------------------------------------------------------------------------
Q 010932 131 -------------------------------------------------------------------------------- 130 (497)
Q Consensus 131 -------------------------------------------------------------------------------- 130 (497)
T Consensus 562 ~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~ 641 (1351)
T KOG1035|consen 562 DSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVI 641 (1351)
T ss_pred chhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccc
Confidence
Q ss_pred ---------------------------CceEEEEEcCCCCChhhhhhcCCCCCC--CHHHHHHHHHHHHHHHHHHHcCCC
Q 010932 131 ---------------------------DERLLVAQYMPNDTLSKHLFHWDKQPL--PWEMRVRVAYYIAQALDHCNSQNR 181 (497)
Q Consensus 131 ---------------------------~~~~lv~e~~~~~~L~~~l~~~~~~~l--~~~~~~~i~~~i~~~L~~lh~~~~ 181 (497)
..+||-||||+..+|.+++.. +.+ .....++++++|+.||.|+|+.|
T Consensus 642 ~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~---N~~~~~~d~~wrLFreIlEGLaYIH~~g- 717 (1351)
T KOG1035|consen 642 LDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRR---NHFNSQRDEAWRLFREILEGLAYIHDQG- 717 (1351)
T ss_pred cCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHh---cccchhhHHHHHHHHHHHHHHHHHHhCc-
Confidence 013677888888777777754 222 36778999999999999999999
Q ss_pred cccccCCCcceEeCCCCCeeEcccCCccccC----------------------CCCccccCCCCCCccccccC---CCCc
Q 010932 182 KLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR----------------------DGKSYSTNLAYTPPEFLRTG---RVIP 236 (497)
Q Consensus 182 iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----------------------~~~~~~gt~~y~aPE~~~~~---~~~~ 236 (497)
+|||||||.||+++.++.|||+|||+++... ..+...||.-|+|||++.+. +|+.
T Consensus 718 iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~ 797 (1351)
T KOG1035|consen 718 IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNS 797 (1351)
T ss_pred eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccc
Confidence 9999999999999999999999999998511 11245788999999999864 4999
Q ss_pred ccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccC--CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 237 ESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLE--GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 237 ~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
|+|+||||||++||+.- |....... ..+..+.+..+. ..+.....+.-..+|+++++.||.+|||+.++|..
T Consensus 798 KiDmYSLGIVlFEM~yP---F~TsMERa---~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 798 KIDMYSLGIVLFEMLYP---FGTSMERA---SILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNS 871 (1351)
T ss_pred hhhhHHHHHHHHHHhcc---CCchHHHH---HHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhc
Confidence 99999999999999964 33221111 111111111111 12233344556799999999999999999999974
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=297.95 Aligned_cols=248 Identities=18% Similarity=0.257 Sum_probs=203.8
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccC-CCCcceeeeeeeee-----CCceE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAE-----GDERL 134 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~-----~~~~~ 134 (497)
+.+.++..+|.|.+|.||+++.+ +|+.+|||++...... .+++..|..+|+.. .|||++.++|++.. ++.+|
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLW 97 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLW 97 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEE
Confidence 34466667799999999999964 5999999998765433 36688889999888 69999999999854 46799
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
||||||.|||..+++..-.+..+.|..+..|++.++.||.|||... ++|||||-.|||++.+|.|||.|||++......
T Consensus 98 LVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk-viHRDikG~NiLLT~e~~VKLvDFGvSaQldsT 176 (953)
T KOG0587|consen 98 LVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDST 176 (953)
T ss_pred EEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc-eeeecccCceEEEeccCcEEEeeeeeeeeeecc
Confidence 9999999999999998877889999999999999999999999988 999999999999999999999999998765543
Q ss_pred ----CccccCCCCCCccccccC-----CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHH
Q 010932 215 ----KSYSTNLAYTPPEFLRTG-----RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANE 285 (497)
Q Consensus 215 ----~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (497)
.+..|||.|||||++... .|+.++|+||||++..||.-|.+|+-.. ..+... +.....+.....-|..
T Consensus 177 ~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~Dm--HPmraL-F~IpRNPPPkLkrp~k 253 (953)
T KOG0587|consen 177 VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDM--HPMRAL-FLIPRNPPPKLKRPKK 253 (953)
T ss_pred cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCc--chhhhh-ccCCCCCCccccchhh
Confidence 467899999999999743 4788999999999999999998664221 111110 0111122222334677
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 286 DATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 286 ~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
++..+.++|..||.+|-++||++.+++++
T Consensus 254 Ws~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 254 WSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred HHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 89999999999999999999999999875
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=290.00 Aligned_cols=250 Identities=14% Similarity=0.157 Sum_probs=212.2
Q ss_pred CCCcccccccCCCCCCcEEEEEEEcCC-cEEEEEEccCCCCCC---hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLKNN-RLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~~~-~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
.+++.+++..||-|+||.|-++..++. ..+|+|++++....+ .+.+..|-.+|...+.|.||++|-.|.+....||
T Consensus 418 ~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYm 497 (732)
T KOG0614|consen 418 KLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYM 497 (732)
T ss_pred chhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhh
Confidence 345667788999999999999997653 349999998765444 4568889999999999999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK 215 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 215 (497)
+||-|-||.|+..|+. ++.|.......++..++.|++|||++| ||.|||||+|.+++.+|-+||.|||+|+....+.
T Consensus 498 LmEaClGGElWTiLrd--Rg~Fdd~tarF~~acv~EAfeYLH~k~-iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~ 574 (732)
T KOG0614|consen 498 LMEACLGGELWTILRD--RGSFDDYTARFYVACVLEAFEYLHRKG-IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR 574 (732)
T ss_pred hHHhhcCchhhhhhhh--cCCcccchhhhhHHHHHHHHHHHHhcC-ceeccCChhheeeccCCceEEeehhhHHHhccCC
Confidence 9999999999999976 789999999999999999999999999 9999999999999999999999999999877664
Q ss_pred ---ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 216 ---SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 216 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
+++|||.|.|||++.+...+..+|.||||+++|||++|.+||.+...-.... .++...-...+|...+....+
T Consensus 575 KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn----~ILkGid~i~~Pr~I~k~a~~ 650 (732)
T KOG0614|consen 575 KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYN----LILKGIDKIEFPRRITKTATD 650 (732)
T ss_pred ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHH----HHHhhhhhhhcccccchhHHH
Confidence 5899999999999999999999999999999999999999886543221111 112222223566777888999
Q ss_pred HHHHhcccCCCCCCC-----HHHHHHHhh
Q 010932 293 LASKCLQYEAKDRPD-----VKFLLSAVA 316 (497)
Q Consensus 293 li~~cl~~dp~~Rps-----~~~ll~~l~ 316 (497)
||++++..+|.+|.. +.+|-+|-+
T Consensus 651 Lik~LCr~~P~ERLG~~~~gI~DIkkH~W 679 (732)
T KOG0614|consen 651 LIKKLCRDNPTERLGYQKGGINDIKKHRW 679 (732)
T ss_pred HHHHHHhcCcHhhhccccCChHHHHhhhh
Confidence 999999999999975 677777643
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=304.31 Aligned_cols=248 Identities=19% Similarity=0.297 Sum_probs=205.1
Q ss_pred ccCCCCCCcEEEEEEEcC--------CcEEEEEEccCCCCC-ChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEE
Q 010932 68 SESGDKAPNVVYRGRLKN--------NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 137 (497)
+.+|.|.||.|++|.... ...||||.++..... +.+.+..|+++|+.+ +|+||+.++|+|...+..++|+
T Consensus 302 ~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~ 381 (609)
T KOG0200|consen 302 KYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIV 381 (609)
T ss_pred ceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEE
Confidence 367999999999998531 357999999865433 457899999999999 6999999999999999999999
Q ss_pred EcCCCCChhhhhhcCC------C--------CCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEc
Q 010932 138 QYMPNDTLSKHLFHWD------K--------QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLS 203 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~------~--------~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~ 203 (497)
||+..|+|.++|+... . ..++....+.++.||+.|++||++.. +|||||-..|||+..+..+||+
T Consensus 382 Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~-~vHRDLAaRNVLi~~~~~~kIa 460 (609)
T KOG0200|consen 382 EYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP-CVHRDLAARNVLITKNKVIKIA 460 (609)
T ss_pred EeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC-ccchhhhhhhEEecCCCEEEEc
Confidence 9999999999997643 0 23899999999999999999999999 9999999999999999999999
Q ss_pred ccCCccccCCCCcc-----cc--CCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccccccc
Q 010932 204 SFGLMKNSRDGKSY-----ST--NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDS 276 (497)
Q Consensus 204 Dfgla~~~~~~~~~-----~g--t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~ 276 (497)
|||+++.......+ .+ ...|||||.+....|+.+||||||||+||||+|...+|..... ....+...+..
T Consensus 461 DFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~---~~~~l~~~l~~ 537 (609)
T KOG0200|consen 461 DFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP---PTEELLEFLKE 537 (609)
T ss_pred cccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC---cHHHHHHHHhc
Confidence 99999964443221 12 3459999999999999999999999999999996654433200 01112224455
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 277 SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 277 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
..+...|..++.++.++++.||+.+|++||++.++.+.+....
T Consensus 538 G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 538 GNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred CCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 5566778888999999999999999999999999999998853
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-35 Score=275.15 Aligned_cols=248 Identities=21% Similarity=0.275 Sum_probs=195.0
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCC-CCCC------hhHHHHHHHHhccCCCCcceeeeeeeee-CCce
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQ-SWPD------PHQFVTEAAGLGNVRHKRLVNLIGCCAE-GDER 133 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~------~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~ 133 (497)
.|.++..||+|+|+.||++.+- ..+.||||+-... .+.+ .+...+|..+-+.|.||.||++|++|.- .+.+
T Consensus 464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF 543 (775)
T KOG1151|consen 464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF 543 (775)
T ss_pred HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence 4566778999999999999954 5899999986432 1111 2357899999999999999999999854 4678
Q ss_pred EEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCcccccCCCcceEeC---CCCCeeEcccCCcc
Q 010932 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQ-NRKLYHDLNAYRVLFD---EDGDPRLSSFGLMK 209 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~-~~iiH~Dlkp~Nill~---~~~~~kl~Dfgla~ 209 (497)
|-|+|||+|.+|.-+|.. ...+++..++.|+.||+.||.||.+. .+|||=||||.|||+. .-|.+||+|||+++
T Consensus 544 CTVLEYceGNDLDFYLKQ--hklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSK 621 (775)
T KOG1151|consen 544 CTVLEYCEGNDLDFYLKQ--HKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSK 621 (775)
T ss_pred eeeeeecCCCchhHHHHh--hhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhh
Confidence 999999999999999975 56899999999999999999999975 4599999999999995 45889999999999
Q ss_pred ccCCCC-----------ccccCCCCCCccccccC----CCCcccceeehhhhHHHHhhCCCCCCchh--hHHHhcccccc
Q 010932 210 NSRDGK-----------SYSTNLAYTPPEFLRTG----RVIPESVIYSYGTVLLDLLSGKHIPPSHA--LDVIRGKNLLL 272 (497)
Q Consensus 210 ~~~~~~-----------~~~gt~~y~aPE~~~~~----~~~~~~Dv~slG~~l~elltg~~~~~~~~--~~~~~~~~~~~ 272 (497)
.+.... ...||.+|++||.+.-+ +++.|+||||+||++|..+.|+.||.... .+.+....+..
T Consensus 622 IMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlk 701 (775)
T KOG1151|consen 622 IMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILK 701 (775)
T ss_pred hccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhc
Confidence 765432 35689999999988644 47889999999999999999999985431 11222222211
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 273 LMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 273 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
...- .-+.-+..+.++.+||++||++.-++|....++..+
T Consensus 702 AtEV--qFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 702 ATEV--QFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred ceec--cCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 1111 111224567789999999999999999887776553
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-35 Score=265.01 Aligned_cols=242 Identities=19% Similarity=0.281 Sum_probs=198.3
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC---CCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS---WPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 135 (497)
..++.+++.||+|+|.+|.+++++ +.+.+|+|++++.. .++.+-++.|-.+..+. +||.+|.++.+|++...+++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 345677888899999999999976 48899999998643 33455677777777666 69999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC---
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR--- 212 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~--- 212 (497)
|.||++||+|--++.. ...++++.++.+..+|+.||.|||+.| ||.||||..|||+|..|++||+|+|.++..-
T Consensus 329 vieyv~ggdlmfhmqr--qrklpeeharfys~ei~lal~flh~rg-iiyrdlkldnvlldaeghikltdygmcke~l~~g 405 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEICLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPG 405 (593)
T ss_pred EEEEecCcceeeehhh--hhcCcHHHhhhhhHHHHHHHHHHhhcC-eeeeeccccceEEccCCceeecccchhhcCCCCC
Confidence 9999999999776654 678999999999999999999999999 9999999999999999999999999998532
Q ss_pred -CCCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHH--hccc--cccccccccCCCCCHHHH
Q 010932 213 -DGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVI--RGKN--LLLLMDSSLEGQYANEDA 287 (497)
Q Consensus 213 -~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~ 287 (497)
..++++|||.|+|||++++..|....|+|+|||+++||+.|+.||.--..+.. ...+ +.-++...+ ++|...+
T Consensus 406 d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi--riprsls 483 (593)
T KOG0695|consen 406 DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI--RIPRSLS 483 (593)
T ss_pred cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc--cccceee
Confidence 33578999999999999999999999999999999999999999853211110 1111 112222222 4556667
Q ss_pred HHHHHHHHHhcccCCCCCCC
Q 010932 288 TQLVELASKCLQYEAKDRPD 307 (497)
Q Consensus 288 ~~l~~li~~cl~~dp~~Rps 307 (497)
-.+..+++.-|.+||.+|..
T Consensus 484 vkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 484 VKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred hhhHHHHHHhhcCCcHHhcC
Confidence 77889999999999999953
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-36 Score=261.70 Aligned_cols=254 Identities=22% Similarity=0.262 Sum_probs=192.0
Q ss_pred cccccccCCCCCCcEEEEEEEcC-CcEEEEEEcc--CCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeC--------C
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFS--RQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG--------D 131 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~--~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--------~ 131 (497)
.+..+.++|+|.||.||+++.++ |+.||+|++- +....-....++|+++|..+.|+|++.++..|... .
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 34556778999999999999765 8889998653 22223346788999999999999999999988542 2
Q ss_pred ceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcccc
Q 010932 132 ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS 211 (497)
Q Consensus 132 ~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 211 (497)
.++|||.+|+. +|..+|.. ....++..++.+++.++..||.|+|... |+|||+||.|+||+.+|.+||+|||+++..
T Consensus 98 t~ylVf~~ceh-DLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k-ilHRDmKaaNvLIt~dgilklADFGlar~f 174 (376)
T KOG0669|consen 98 TFYLVFDFCEH-DLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIHRNK-ILHRDMKAANVLITKDGILKLADFGLARAF 174 (376)
T ss_pred eeeeeHHHhhh-hHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHhh-HHhhcccHhhEEEcCCceEEeeccccccce
Confidence 47999999964 57777754 2467999999999999999999999998 999999999999999999999999999754
Q ss_pred CCCC--------ccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHH----------------Hh
Q 010932 212 RDGK--------SYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDV----------------IR 266 (497)
Q Consensus 212 ~~~~--------~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~----------------~~ 266 (497)
.... ..+.|.+|.+||.+.+ ..++++.|||+-||++.||+|+.+.+.+..... +.
T Consensus 175 s~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP 254 (376)
T KOG0669|consen 175 STSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWP 254 (376)
T ss_pred ecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCC
Confidence 4332 2234889999999987 568999999999999999999998776542110 00
Q ss_pred ---ccccccccccc-c-CCC---C-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 267 ---GKNLLLLMDSS-L-EGQ---Y-----ANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 267 ---~~~~~~~~~~~-~-~~~---~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
.-.+...+... + ... . |-.-..+..+|+.++|..||.+|+++.+++.+-.-..
T Consensus 255 ~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~k 320 (376)
T KOG0669|consen 255 NVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWK 320 (376)
T ss_pred CcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhc
Confidence 00011111000 0 000 0 0001236889999999999999999999999754443
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=281.35 Aligned_cols=251 Identities=20% Similarity=0.205 Sum_probs=198.8
Q ss_pred CHHHHHHHhcCCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC---hhHHHHHHHHhccCCCCcceeeee
Q 010932 50 VLADLRAATNGFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHKRLVNLIG 125 (497)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~ 125 (497)
.+..|+++.-+-+.+.+|+.||-|+||.|-++... +...+|+|.+.+.+.-. ...+..|-+||.....+.||+||-
T Consensus 617 nYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyy 696 (1034)
T KOG0608|consen 617 NYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYY 696 (1034)
T ss_pred hHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEE
Confidence 45556666667778888999999999999999854 47899999997654333 235788999999999999999999
Q ss_pred eeeeCCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEccc
Q 010932 126 CCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSF 205 (497)
Q Consensus 126 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Df 205 (497)
.|.+++++|+||+|++||++-.+|-+ .+-|++..++.++.++..|+++.|..| +|||||||+|||||.+|++||+||
T Consensus 697 SFQDkdnLYFVMdYIPGGDmMSLLIr--mgIFeE~LARFYIAEltcAiesVHkmG-FIHRDiKPDNILIDrdGHIKLTDF 773 (1034)
T KOG0608|consen 697 SFQDKDNLYFVMDYIPGGDMMSLLIR--MGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDF 773 (1034)
T ss_pred EeccCCceEEEEeccCCccHHHHHHH--hccCHHHHHHHHHHHHHHHHHHHHhcc-ceecccCccceEEccCCceeeeec
Confidence 99999999999999999999998865 678999999999999999999999999 999999999999999999999999
Q ss_pred CCccccC---C------C-------------------------------------CccccCCCCCCccccccCCCCcccc
Q 010932 206 GLMKNSR---D------G-------------------------------------KSYSTNLAYTPPEFLRTGRVIPESV 239 (497)
Q Consensus 206 gla~~~~---~------~-------------------------------------~~~~gt~~y~aPE~~~~~~~~~~~D 239 (497)
||+.-.. + + ...+||+.|+|||++....++..+|
T Consensus 774 GLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cd 853 (1034)
T KOG0608|consen 774 GLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCD 853 (1034)
T ss_pred cccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccch
Confidence 9986210 0 0 0245799999999999999999999
Q ss_pred eeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 010932 240 IYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306 (497)
Q Consensus 240 v~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 306 (497)
+||.|||||||+.|+.||........... +. .+...+.-.+....+.++.++|.+++. +++.|.
T Consensus 854 wws~gvil~em~~g~~pf~~~tp~~tq~k-v~-nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RL 917 (1034)
T KOG0608|consen 854 WWSVGVILYEMLVGQPPFLADTPGETQYK-VI-NWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRL 917 (1034)
T ss_pred hhHhhHHHHHHhhCCCCccCCCCCcceee-ee-ehhhccccccccccCHHHHHHHHHHhc-Chhhhh
Confidence 99999999999999998854321111111 11 111111222334466777788877554 466775
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=271.74 Aligned_cols=132 Identities=20% Similarity=0.180 Sum_probs=114.8
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCC-----C---Ccceeeeeeeee---
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR-----H---KRLVNLIGCCAE--- 129 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~~~~~~~~--- 129 (497)
..|.++++||.|.|++||++.+. +.+.||+|+.+... .-.+..+.||++|++++ | .+||+|++.|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 37899999999999999999964 57899999987432 23567889999999994 3 369999999954
Q ss_pred -CCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC
Q 010932 130 -GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD 195 (497)
Q Consensus 130 -~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~ 195 (497)
+.|.|||+|++ |.+|..+|....-..++...+.+|++||+.||.|||..-+|||.||||+|||+.
T Consensus 157 NG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 157 NGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred CCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 56899999999 889999998777789999999999999999999999875599999999999995
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=264.09 Aligned_cols=232 Identities=24% Similarity=0.306 Sum_probs=192.6
Q ss_pred CCcEEEEEEEcC-CcEEEEEEccCCCCCC-hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCChhhhhhc
Q 010932 74 APNVVYRGRLKN-NRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFH 151 (497)
Q Consensus 74 ~~g~V~~~~~~~-~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 151 (497)
+||.||+|...+ |+.+++|++....... .+.+.+|++.+++++|+||+++++.+......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 478999999864 8999999998765444 67899999999999999999999999999999999999999999999865
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---CccccCCCCCCccc
Q 010932 152 WDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---KSYSTNLAYTPPEF 228 (497)
Q Consensus 152 ~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~gt~~y~aPE~ 228 (497)
...+++..+..++.+++.+|.+||+.+ ++|+||+|+||+++.++.++|+|||.+...... ....++..|++||.
T Consensus 81 --~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~ 157 (244)
T smart00220 81 --RGRLSEDEARFYARQILSALEYLHSNG-IIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEV 157 (244)
T ss_pred --ccCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHH
Confidence 233899999999999999999999998 999999999999999999999999998865543 44567889999999
Q ss_pred cccCCCCcccceeehhhhHHHHhhCCCCCCc-hhhHHHhccccccccccccCCCCCH--HHHHHHHHHHHHhcccCCCCC
Q 010932 229 LRTGRVIPESVIYSYGTVLLDLLSGKHIPPS-HALDVIRGKNLLLLMDSSLEGQYAN--EDATQLVELASKCLQYEAKDR 305 (497)
Q Consensus 229 ~~~~~~~~~~Dv~slG~~l~elltg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~cl~~dp~~R 305 (497)
+.+..++.++||||||+++++|++|..|+.. ...... .............. ..+..+.+++.+||..+|++|
T Consensus 158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 232 (244)
T smart00220 158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLEL-----FKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKR 232 (244)
T ss_pred HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH-----HHHHhccCCCCccccccCCHHHHHHHHHHccCCchhc
Confidence 9988899999999999999999999987754 211111 11111111111111 156789999999999999999
Q ss_pred CCHHHHHH
Q 010932 306 PDVKFLLS 313 (497)
Q Consensus 306 ps~~~ll~ 313 (497)
|++.++++
T Consensus 233 p~~~~~~~ 240 (244)
T smart00220 233 LTAEEALQ 240 (244)
T ss_pred cCHHHHhh
Confidence 99999987
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-34 Score=294.75 Aligned_cols=250 Identities=18% Similarity=0.220 Sum_probs=166.8
Q ss_pred CCCcccccccCCCCCCcEEEEEEEc-C----CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeee------ee
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLK-N----NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGC------CA 128 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~-~----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~------~~ 128 (497)
..+.+.+.+.||+|+||.||+|.+. + +..||||++..... .+.+..+ .+....+.+++.++.. ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 3456677888999999999999975 4 68999999864321 1222222 1122222333322222 24
Q ss_pred eCCceEEEEEcCCCCChhhhhhcCCCC------------------CCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCc
Q 010932 129 EGDERLLVAQYMPNDTLSKHLFHWDKQ------------------PLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190 (497)
Q Consensus 129 ~~~~~~lv~e~~~~~~L~~~l~~~~~~------------------~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~ 190 (497)
.....++|+||+.+++|.+++...... ......+..++.||+.||.|||+++ |+||||||+
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g-IiHRDLKP~ 284 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG-IVHRDVKPQ 284 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC-EEeCcCCHH
Confidence 556789999999999999988642110 1123446689999999999999999 999999999
Q ss_pred ceEeCC-CCCeeEcccCCccccCCC-----CccccCCCCCCccccccC----------------------CCCcccceee
Q 010932 191 RVLFDE-DGDPRLSSFGLMKNSRDG-----KSYSTNLAYTPPEFLRTG----------------------RVIPESVIYS 242 (497)
Q Consensus 191 Nill~~-~~~~kl~Dfgla~~~~~~-----~~~~gt~~y~aPE~~~~~----------------------~~~~~~Dv~s 242 (497)
|||++. ++.+||+|||+++..... ....+|+.|||||.+... .++.++||||
T Consensus 285 NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS 364 (566)
T PLN03225 285 NIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS 364 (566)
T ss_pred HEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence 999985 689999999999854322 346788999999966422 2345679999
Q ss_pred hhhhHHHHhhCCCCCCchhhHHH---hcc--ccc---cccccccCCC------CCHHHHHHHHHHHHHhcccCCCCCCCH
Q 010932 243 YGTVLLDLLSGKHIPPSHALDVI---RGK--NLL---LLMDSSLEGQ------YANEDATQLVELASKCLQYEAKDRPDV 308 (497)
Q Consensus 243 lG~~l~elltg~~~~~~~~~~~~---~~~--~~~---~~~~~~~~~~------~~~~~~~~l~~li~~cl~~dp~~Rps~ 308 (497)
|||+||||+++..++........ ... ... .........+ ..........+|+.+||+.||++|||+
T Consensus 365 lGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta 444 (566)
T PLN03225 365 AGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISA 444 (566)
T ss_pred HHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCH
Confidence 99999999997754432211110 000 000 0011110000 001112345689999999999999999
Q ss_pred HHHHHH
Q 010932 309 KFLLSA 314 (497)
Q Consensus 309 ~~ll~~ 314 (497)
.++++|
T Consensus 445 ~e~L~H 450 (566)
T PLN03225 445 KAALAH 450 (566)
T ss_pred HHHhCC
Confidence 999986
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=248.83 Aligned_cols=258 Identities=19% Similarity=0.232 Sum_probs=203.5
Q ss_pred ccCHHHHHHHhcCCCcccccccCCCCCCcEEEEEEE-cCCcEEEEEEccCCCCCChhHHHHHHHHhccCC-CCcceeeee
Q 010932 48 EFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRL-KNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR-HKRLVNLIG 125 (497)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~ 125 (497)
-|.++......++-+.+++++++|+|.++.||.|.. .+++.++||++++-. .+.+.+|+.+|..|+ ||||+++++
T Consensus 24 YWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~D 100 (338)
T KOG0668|consen 24 YWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLD 100 (338)
T ss_pred hcchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhh
Confidence 456666666667788999999999999999999994 568999999998643 456999999999997 999999999
Q ss_pred eeeeC--CceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC-CCeeE
Q 010932 126 CCAEG--DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED-GDPRL 202 (497)
Q Consensus 126 ~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~-~~~kl 202 (497)
+..+. ....||+||+++.+...+. +.++...+..++.+++.||.|||+.| |+|||+||.|++||.. -.++|
T Consensus 101 iV~Dp~SktpaLiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~G-ImHRDVKPhNvmIdh~~rkLrl 174 (338)
T KOG0668|consen 101 IVKDPESKTPSLIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSMG-IMHRDVKPHNVMIDHELRKLRL 174 (338)
T ss_pred hhcCccccCchhHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhcC-cccccCCcceeeechhhceeee
Confidence 98775 3568999999988876654 57888999999999999999999999 9999999999999954 56999
Q ss_pred cccCCccccCCCCcc---ccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhH---HHh---------
Q 010932 203 SSFGLMKNSRDGKSY---STNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALD---VIR--------- 266 (497)
Q Consensus 203 ~Dfgla~~~~~~~~~---~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~---~~~--------- 266 (497)
+|+|+|....++... ..+..|--||.+.. ..|+..-|+|||||++..|+..+.||...... .+.
T Consensus 175 IDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~e 254 (338)
T KOG0668|consen 175 IDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDE 254 (338)
T ss_pred eecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHH
Confidence 999999987766543 45677889999875 55788999999999999999999998543100 000
Q ss_pred ------------ccccccccccccCCCC--------CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 267 ------------GKNLLLLMDSSLEGQY--------ANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 267 ------------~~~~~~~~~~~~~~~~--------~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
......++....+..+ ..-.++++.+|+.++|..|..+|||+.|.+.+
T Consensus 255 l~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 255 LYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 0001111111111110 11135789999999999999999999999875
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-33 Score=280.37 Aligned_cols=252 Identities=16% Similarity=0.179 Sum_probs=177.0
Q ss_pred CcccccccCCCCCCcEEEEEEE-----------------cCCcEEEEEEccCCCCCChhH--------------HHHHHH
Q 010932 62 SSELIVSESGDKAPNVVYRGRL-----------------KNNRLVAIKRFSRQSWPDPHQ--------------FVTEAA 110 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~e~~ 110 (497)
+.+.+.++||+|+||+||+|.. .+++.||||.+........+. +..|+.
T Consensus 145 d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~ 224 (507)
T PLN03224 145 DDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAY 224 (507)
T ss_pred cCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHH
Confidence 3556677889999999999964 235689999987543322233 344666
Q ss_pred HhccCCCCcc-----eeeeeeeee--------CCceEEEEEcCCCCChhhhhhcCC----------------------CC
Q 010932 111 GLGNVRHKRL-----VNLIGCCAE--------GDERLLVAQYMPNDTLSKHLFHWD----------------------KQ 155 (497)
Q Consensus 111 ~l~~l~h~ni-----v~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~----------------------~~ 155 (497)
++.+++|.++ ++++++|.. ....+|||||+++++|.++++... ..
T Consensus 225 ~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~ 304 (507)
T PLN03224 225 MCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQD 304 (507)
T ss_pred HHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccc
Confidence 7777765543 667777643 356899999999999999886421 12
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC---c--cccCCCCCCccccc
Q 010932 156 PLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK---S--YSTNLAYTPPEFLR 230 (497)
Q Consensus 156 ~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---~--~~gt~~y~aPE~~~ 230 (497)
.+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++....... . ..+|+.|+|||.+.
T Consensus 305 ~~~~~~~~~i~~ql~~aL~~lH~~~-ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~ 383 (507)
T PLN03224 305 KRDINVIKGVMRQVLTGLRKLHRIG-IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELV 383 (507)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhc
Confidence 3467788999999999999999999 9999999999999999999999999987543321 1 23378999999886
Q ss_pred cCCC----------------------CcccceeehhhhHHHHhhCCCCCCchh---hHHHh--ccccc---cccccccCC
Q 010932 231 TGRV----------------------IPESVIYSYGTVLLDLLSGKHIPPSHA---LDVIR--GKNLL---LLMDSSLEG 280 (497)
Q Consensus 231 ~~~~----------------------~~~~Dv~slG~~l~elltg~~~~~~~~---~~~~~--~~~~~---~~~~~~~~~ 280 (497)
.... ..+.||||+||++++|++|..++.... ..... ..... ........-
T Consensus 384 ~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~ 463 (507)
T PLN03224 384 MPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDF 463 (507)
T ss_pred CCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCc
Confidence 4321 234799999999999999985322110 00000 00000 000111111
Q ss_pred CCCHHHHHHHHHHHHHhcccCC---CCCCCHHHHHHH
Q 010932 281 QYANEDATQLVELASKCLQYEA---KDRPDVKFLLSA 314 (497)
Q Consensus 281 ~~~~~~~~~l~~li~~cl~~dp---~~Rps~~~ll~~ 314 (497)
......++...+|+.+||..+| .+|+|+.++|+|
T Consensus 464 ~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 464 SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 1223456789999999999876 689999999986
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-34 Score=272.05 Aligned_cols=250 Identities=19% Similarity=0.160 Sum_probs=197.4
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCC------CCcceeeeeeeeeCCceE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR------HKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~~~~~~~~~~~~~ 134 (497)
+.|.+.+-.|+|-|++|-+|.+.. |..||||+|.+..... +.=++|+++|++|+ .-|+++++-.|...+|+|
T Consensus 432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~-KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLC 510 (752)
T KOG0670|consen 432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMH-KTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLC 510 (752)
T ss_pred ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHh-hhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeE
Confidence 356778889999999999999765 8899999998764332 34568999999995 458999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC-CCeeEcccCCccccC
Q 010932 135 LVAQYMPNDTLSKHLFHWD-KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED-GDPRLSSFGLMKNSR 212 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~ 212 (497)
||+|.+ ..+|.++|..-. .-+|....+..++.|+.-||..|-.+| |+|.||||.||||+.. ..+||||||.|....
T Consensus 511 lVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~-vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~ 588 (752)
T KOG0670|consen 511 LVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG-VLHADIKPDNILVNESKNILKLCDFGSASFAS 588 (752)
T ss_pred EEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC-eeecccCccceEeccCcceeeeccCccccccc
Confidence 999998 678999997633 347889999999999999999999999 9999999999999855 568999999987655
Q ss_pred CC--CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHh----------------c-------
Q 010932 213 DG--KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIR----------------G------- 267 (497)
Q Consensus 213 ~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~----------------~------- 267 (497)
.. ..+..+..|.|||++.|..|+...|+||+||+||||.||+.+||+.....+. .
T Consensus 589 eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqH 668 (752)
T KOG0670|consen 589 ENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQH 668 (752)
T ss_pred cccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhh
Confidence 44 2344567899999999999999999999999999999999988865211110 0
Q ss_pred -----------------ccccc---ccccc------c--CCCCC---HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 268 -----------------KNLLL---LMDSS------L--EGQYA---NEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 268 -----------------~~~~~---~~~~~------~--~~~~~---~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..... .+.+. + ...++ ......+.+|+.+||..||++|.|..++|.|
T Consensus 669 FD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 669 FDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKH 746 (752)
T ss_pred cccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence 00000 00000 0 00122 2234578999999999999999999999975
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=237.96 Aligned_cols=198 Identities=17% Similarity=0.224 Sum_probs=164.9
Q ss_pred cccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC-hhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 65 LIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD-PHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
..+.+||+|++|.|-+-++. +|...|+|.+...-... ..+.++|+.+..+. .+|.+|.++|........|+.||.|.
T Consensus 49 ~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~ 128 (282)
T KOG0984|consen 49 VGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD 128 (282)
T ss_pred hhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh
Confidence 34567899999999999975 69999999998654322 45788888886555 69999999999999999999999994
Q ss_pred CCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--Cc-
Q 010932 142 NDTLSKHLFH--WDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KS- 216 (497)
Q Consensus 142 ~~~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~- 216 (497)
.||..+..+ ..++.+++..+-+|+..|+.||.|||++-.+||||+||+||||+.+|+||+||||++-...+. .+
T Consensus 129 -tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~ 207 (282)
T KOG0984|consen 129 -TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTM 207 (282)
T ss_pred -hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHH
Confidence 677666542 136789999999999999999999999866999999999999999999999999998765444 22
Q ss_pred cccCCCCCCcccccc----CCCCcccceeehhhhHHHHhhCCCCCCchhhH
Q 010932 217 YSTNLAYTPPEFLRT----GRVIPESVIYSYGTVLLDLLSGKHIPPSHALD 263 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~----~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~ 263 (497)
..|.-.|||||.+.. ..|+.||||||||+++.||.+++.|++.+...
T Consensus 208 daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tp 258 (282)
T KOG0984|consen 208 DAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTP 258 (282)
T ss_pred hcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCH
Confidence 456778999998863 36899999999999999999999988766443
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=281.21 Aligned_cols=240 Identities=23% Similarity=0.236 Sum_probs=181.1
Q ss_pred CCcccccccCCCCCCc-EEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEEE
Q 010932 61 FSSELIVSESGDKAPN-VVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g-~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 138 (497)
|+...++ |.|+-| .||+|.. +|+.||||.+-... .....+|+++|+.- .|||||++++.-.+....||..|
T Consensus 511 ~~~~eil---G~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 511 FSPKEIL---GYGSNGTVVFRGVY-EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred eccHHHc---ccCCCCcEEEEEee-CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 4445555 555543 6899998 58999999986433 34578999999888 59999999999999999999999
Q ss_pred cCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC---C--CCeeEcccCCcccc
Q 010932 139 YMPNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE---D--GDPRLSSFGLMKNS 211 (497)
Q Consensus 139 ~~~~~~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~---~--~~~kl~Dfgla~~~ 211 (497)
.| ..+|.+++... +.........+.++.|++.||+|||+.+ ||||||||.||||+. + .+++|+|||+++..
T Consensus 584 LC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~-iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 584 LC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK-IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred Hh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc-cccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 99 58999999652 1111111345788999999999999999 999999999999975 3 46899999999976
Q ss_pred CCCC-------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhC-CCCCCchhhHHHhccccccccccccCCCCC
Q 010932 212 RDGK-------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSG-KHIPPSHALDVIRGKNLLLLMDSSLEGQYA 283 (497)
Q Consensus 212 ~~~~-------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (497)
..++ ...||-+|+|||++....-+..+||||||||+|+.++| .+||...... ..++..-......-...
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R---~~NIl~~~~~L~~L~~~ 738 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER---QANILTGNYTLVHLEPL 738 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHh---hhhhhcCccceeeeccC
Confidence 5443 35689999999999988888899999999999999998 5565332111 11111000000000111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 284 NEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 284 ~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.++ ++.+||.+|+..+|..||++.+||.|
T Consensus 739 ~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 739 PDC--EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred chH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 112 78999999999999999999999986
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=276.63 Aligned_cols=248 Identities=20% Similarity=0.217 Sum_probs=205.3
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
-+++..+.++|+|++|.||++++. +++..|+|+++-....+..-...|+-+++..+|||||.++|.+...+..|++|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 356777888899999999999965 5999999999877766777788999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC----CCC
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR----DGK 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----~~~ 215 (497)
|.||+|.+..+- .+++++.++..++++.++||.|||+.| -+|||||-.|||+++.|.+|++|||.+-... ..+
T Consensus 94 cgggslQdiy~~--TgplselqiayvcRetl~gl~ylhs~g-k~hRdiKGanilltd~gDvklaDfgvsaqitati~Krk 170 (829)
T KOG0576|consen 94 CGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLKYLHSQG-KIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRK 170 (829)
T ss_pred cCCCcccceeee--cccchhHHHHHHHhhhhccchhhhcCC-cccccccccceeecccCceeecccCchhhhhhhhhhhh
Confidence 999999997754 688999999999999999999999999 8999999999999999999999999876543 346
Q ss_pred ccccCCCCCCccccc---cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccc--ccccccccCCCCCHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLR---TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNL--LLLMDSSLEGQYANEDATQL 290 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l 290 (497)
++.||+.|||||+.. .+.|+.++|||++|++..|+-.-+.|... . ..++...+ ....++.. ..-...+++.+
T Consensus 171 sfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfd-l-hpmr~l~LmTkS~~qpp~-lkDk~kws~~f 247 (829)
T KOG0576|consen 171 SFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFD-L-HPMRALFLMTKSGFQPPT-LKDKTKWSEFF 247 (829)
T ss_pred cccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccc-c-chHHHHHHhhccCCCCCc-ccCCccchHHH
Confidence 789999999999763 57799999999999999999877754221 1 11111100 00111111 12234577889
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHH
Q 010932 291 VELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 291 ~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+|++.||.++|++|||++.+|.+
T Consensus 248 h~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 248 HNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred HHHHHHHhcCCCccCCChhhheec
Confidence 999999999999999999998883
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.9e-34 Score=251.54 Aligned_cols=245 Identities=19% Similarity=0.259 Sum_probs=187.6
Q ss_pred cccCCCCCCcEEEEEEE-cCCcEEEEEEccCC--CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCC-----ceEEEEE
Q 010932 67 VSESGDKAPNVVYRGRL-KNNRLVAIKRFSRQ--SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD-----ERLLVAQ 138 (497)
Q Consensus 67 ~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e 138 (497)
-+-||.|+||+||.+.+ ++|+.||+|++.+- .....+.+.+|+++|..++|.||+..++...-.. +.|+++|
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TE 137 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTE 137 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHH
Confidence 35679999999999996 46999999998753 2233578999999999999999999998775442 4678888
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCc--
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-- 216 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-- 216 (497)
.+ ..+|...|-. ...++...+.-++.||++||.|||+.+ |+||||||.|.|++.|..+||||||+++.......
T Consensus 138 Lm-QSDLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLHsA~-ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~h 213 (449)
T KOG0664|consen 138 LM-QSDLHKIIVS--PQALTPDHVKVFVYQILRGLKYLHTAN-ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLN 213 (449)
T ss_pred HH-Hhhhhheecc--CCCCCcchhhhhHHHHHhhhHHHhhcc-hhhccCCCccEEeccCceEEecccccccccchhhhhh
Confidence 88 4567777754 678999999999999999999999999 99999999999999999999999999997654432
Q ss_pred ---cccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhh----H------------HHh---ccccccc
Q 010932 217 ---YSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHAL----D------------VIR---GKNLLLL 273 (497)
Q Consensus 217 ---~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~----~------------~~~---~~~~~~~ 273 (497)
...|..|.|||++.+ ..|+...||||+||++.||+..+..|..... + .++ .+....+
T Consensus 214 MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~ 293 (449)
T KOG0664|consen 214 MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHV 293 (449)
T ss_pred hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHh
Confidence 345789999999987 5699999999999999999988766643210 0 000 0000011
Q ss_pred cccccC-C--------CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010932 274 MDSSLE-G--------QYANEDATQLVELASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 274 ~~~~~~-~--------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l 315 (497)
+....+ + ..+.....+...++..++..||++|.+..+.+.++
T Consensus 294 LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 294 LRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 111110 0 01122334677889999999999999999998875
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-32 Score=260.78 Aligned_cols=200 Identities=17% Similarity=0.183 Sum_probs=174.7
Q ss_pred HHhcCCCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCC--------ChhHHHHHHHHhccCC---CCcceee
Q 010932 56 AATNGFSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWP--------DPHQFVTEAAGLGNVR---HKRLVNL 123 (497)
Q Consensus 56 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~---h~niv~~ 123 (497)
.-..+|++|..++.+|.|+||.|+++.++. ...|+||.+.+...- +.-.+-.|+++|..++ |+||+++
T Consensus 555 ~~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKl 634 (772)
T KOG1152|consen 555 KEYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKL 634 (772)
T ss_pred eeecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhh
Confidence 444678889999999999999999999875 678999998754321 1224667999999997 9999999
Q ss_pred eeeeeeCCceEEEEEcC-CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeE
Q 010932 124 IGCCAEGDERLLVAQYM-PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRL 202 (497)
Q Consensus 124 ~~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl 202 (497)
+++|.+++..||+||-- +|.+|.++|.. .+.+++..+..|+.||+.|+++||++| |||||||-+||.++.+|-+||
T Consensus 635 LdfFEddd~yyl~te~hg~gIDLFd~IE~--kp~m~E~eAk~IFkQV~agi~hlh~~~-ivhrdikdenvivd~~g~~kl 711 (772)
T KOG1152|consen 635 LDFFEDDDYYYLETEVHGEGIDLFDFIEF--KPRMDEPEAKLIFKQVVAGIKHLHDQG-IVHRDIKDENVIVDSNGFVKL 711 (772)
T ss_pred hheeecCCeeEEEecCCCCCcchhhhhhc--cCccchHHHHHHHHHHHhccccccccC-ceecccccccEEEecCCeEEE
Confidence 99999999999999974 67899999965 678999999999999999999999999 999999999999999999999
Q ss_pred cccCCccccCC--CCccccCCCCCCccccccCCC-CcccceeehhhhHHHHhhCCCCCC
Q 010932 203 SSFGLMKNSRD--GKSYSTNLAYTPPEFLRTGRV-IPESVIYSYGTVLLDLLSGKHIPP 258 (497)
Q Consensus 203 ~Dfgla~~~~~--~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~ 258 (497)
+|||.+..... ...+.||..|.|||++.+.+| ...-|||++|++||.++....|+.
T Consensus 712 idfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 712 IDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred eeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 99999875544 467899999999999999888 456899999999999999887764
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-30 Score=234.74 Aligned_cols=207 Identities=27% Similarity=0.377 Sum_probs=183.6
Q ss_pred CCCCCCcEEEEEEEcC-CcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCChhh
Q 010932 70 SGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSK 147 (497)
Q Consensus 70 lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 147 (497)
+|.|.+|.||++...+ |+.+++|++...... ..+.+.+|++.++.++|++|+++++++......++++|++.+++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 5899999999999865 899999999865432 24679999999999999999999999999899999999999999999
Q ss_pred hhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC-CCCeeEcccCCccccCCC----CccccCCC
Q 010932 148 HLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE-DGDPRLSSFGLMKNSRDG----KSYSTNLA 222 (497)
Q Consensus 148 ~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~~~~~~----~~~~gt~~ 222 (497)
++... ...+++..+..++.+++++|.+||+.+ ++|+||+|.||+++. ++.++|+|||.+...... ....+...
T Consensus 81 ~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~-~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~ 158 (215)
T cd00180 81 LLKEN-EGKLSEDEILRILLQILEGLEYLHSNG-IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPA 158 (215)
T ss_pred HHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCC
Confidence 98642 146899999999999999999999998 999999999999999 899999999998865443 33456788
Q ss_pred CCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccC
Q 010932 223 YTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYE 301 (497)
Q Consensus 223 y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 301 (497)
|++||.+... ..+.++|+|++|+++++| ..+.+++.+|++.|
T Consensus 159 ~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------~~~~~~l~~~l~~~ 201 (215)
T cd00180 159 YMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------PELKDLIRKMLQKD 201 (215)
T ss_pred ccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------HHHHHHHHHHhhCC
Confidence 9999999877 788999999999999999 56889999999999
Q ss_pred CCCCCCHHHHHHHh
Q 010932 302 AKDRPDVKFLLSAV 315 (497)
Q Consensus 302 p~~Rps~~~ll~~l 315 (497)
|++||++.++++++
T Consensus 202 p~~R~~~~~l~~~~ 215 (215)
T cd00180 202 PEKRPSAKEILEHL 215 (215)
T ss_pred cccCcCHHHHhhCC
Confidence 99999999998753
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-31 Score=240.67 Aligned_cols=244 Identities=21% Similarity=0.259 Sum_probs=187.5
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCC--CCCChhHHHHHHHHhccCCCCcceeeeeeeeeC------CceE
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQ--SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG------DERL 134 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~ 134 (497)
+.-++-+|.|.- .|-.+.+. .++.||+|.+... .....++..+|..++..+.|+||++++.+|.-. ...|
T Consensus 19 y~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y 97 (369)
T KOG0665|consen 19 YVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVY 97 (369)
T ss_pred eeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHH
Confidence 444566688876 45555442 4899999988643 223356789999999999999999999998654 3579
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
+|||++ ..+|...+. -.++-.++..|..|++.|+.|||+.+ |+||||||+||++..++.+||.|||+++.....
T Consensus 98 ~v~e~m-~~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~~-IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~ 171 (369)
T KOG0665|consen 98 LVMELM-DANLCQVIL----MELDHETISYILYQMLCGIKHLHSAG-IIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD 171 (369)
T ss_pred HHHHhh-hhHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhcc-eeecccCcccceecchhheeeccchhhcccCcc
Confidence 999999 577888874 35677889999999999999999999 999999999999999999999999999865543
Q ss_pred ---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHH--------------------------
Q 010932 215 ---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVI-------------------------- 265 (497)
Q Consensus 215 ---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~-------------------------- 265 (497)
+.+..|..|.|||++.+..+...+||||+||++.||++|+..|++...-..
T Consensus 172 ~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~y 251 (369)
T KOG0665|consen 172 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNY 251 (369)
T ss_pred cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHH
Confidence 456678899999999998899999999999999999999988875410000
Q ss_pred -h------ccccccccccc-cC--CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 266 -R------GKNLLLLMDSS-LE--GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 266 -~------~~~~~~~~~~~-~~--~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
. .......+... +. .+.++-.+..+.+++.+||..||++|.|+.++|+|
T Consensus 252 v~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 252 VENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred hhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 0 00000000000 00 01112234568899999999999999999999986
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-31 Score=243.27 Aligned_cols=249 Identities=16% Similarity=0.217 Sum_probs=197.2
Q ss_pred cccCCCCCCcEEEEEEEcC------CcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeC-CceEEEEE
Q 010932 67 VSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG-DERLLVAQ 138 (497)
Q Consensus 67 ~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e 138 (497)
...+-+|.||.||.|.|++ .+.|-+|.++.... -....++.|.-+|..+.|||+..+.+++... ...++++.
T Consensus 289 ~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~ 368 (563)
T KOG1024|consen 289 SCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYP 368 (563)
T ss_pred hhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEe
Confidence 3445889999999997753 34677788876532 2345789999999999999999999998765 45678889
Q ss_pred cCCCCChhhhhhcC------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 139 YMPNDTLSKHLFHW------DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 139 ~~~~~~L~~~l~~~------~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
+..-|+|..+|... ....++..+...++.|++.|++|||+.+ +||.||-..|.+||+..+|||+|=.+++..-
T Consensus 369 ~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~-ViHkDiAaRNCvIdd~LqVkltDsaLSRDLF 447 (563)
T KOG1024|consen 369 ATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG-VIHKDIAARNCVIDDQLQVKLTDSALSRDLF 447 (563)
T ss_pred ccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC-cccchhhhhcceehhheeEEeccchhccccC
Confidence 99899999999722 1345778888999999999999999999 9999999999999999999999999998654
Q ss_pred CCC-c-----cccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHH
Q 010932 213 DGK-S-----YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANED 286 (497)
Q Consensus 213 ~~~-~-----~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (497)
+.. . -.....||+||.+....|+..+|||||||+||||+|-...|..+ +....+...+....+-.-|-+|
T Consensus 448 P~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~Pyae----IDPfEm~~ylkdGyRlaQP~NC 523 (563)
T KOG1024|consen 448 PGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAE----IDPFEMEHYLKDGYRLAQPFNC 523 (563)
T ss_pred cccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccc----cCHHHHHHHHhccceecCCCCC
Confidence 332 1 22356899999999999999999999999999999855433222 1111122223333444556779
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 287 ATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 287 ~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
|.++..++.-||...|++||+++++..-|.....
T Consensus 524 PDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ 557 (563)
T KOG1024|consen 524 PDELFTVMACCWALLPEERPSFSQLVICLSEFHT 557 (563)
T ss_pred cHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999998876653
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=238.38 Aligned_cols=244 Identities=23% Similarity=0.306 Sum_probs=190.3
Q ss_pred cccccccCCCCCCcEEEEEEEc----CCcEEEEEEccCCCCCChhHHHHHHHHhccCC-CCcceeeeeeeeeCCceEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK----NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 137 (497)
.+.++.++|.|+|++||++.+. ..+.||+|.+...+ ...++.+|+++|..+. +.||+++.+++...+..++|+
T Consensus 37 ~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivl 114 (418)
T KOG1167|consen 37 AYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVL 114 (418)
T ss_pred hhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEe
Confidence 3466778899999999999853 36899999997655 3457999999999995 999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC-CCCCeeEcccCCcccc-----
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD-EDGDPRLSSFGLMKNS----- 211 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~----- 211 (497)
||++.....+++. .++...+..+++.++.||.++|.+| ||||||||+|+|.+ ..+.-.|.|||++...
T Consensus 115 p~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~G-IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~ 188 (418)
T KOG1167|consen 115 PYFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHKNG-IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQ 188 (418)
T ss_pred cccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhccC-ccccCCCccccccccccCCceEEechhHHHHHhhhh
Confidence 9999999988874 4678999999999999999999999 99999999999998 4577899999998610
Q ss_pred ------------CC--C-----------------------------CccccCCCCCCcccccc-CCCCcccceeehhhhH
Q 010932 212 ------------RD--G-----------------------------KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVL 247 (497)
Q Consensus 212 ------------~~--~-----------------------------~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l 247 (497)
.. + -...||++|.|||++.. ...+.++||||.||++
T Consensus 189 ~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~ 268 (418)
T KOG1167|consen 189 TEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVIL 268 (418)
T ss_pred hhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecccee
Confidence 00 0 01347899999999875 4578999999999999
Q ss_pred HHHhhCCCCCCchhhHH--------------Hh-----ccc--ccc----------------c-cccccC--------CC
Q 010932 248 LDLLSGKHIPPSHALDV--------------IR-----GKN--LLL----------------L-MDSSLE--------GQ 281 (497)
Q Consensus 248 ~elltg~~~~~~~~~~~--------------~~-----~~~--~~~----------------~-~~~~~~--------~~ 281 (497)
+-+++++.||.....+. +. .+. +.+ + ...... ..
T Consensus 269 Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~ 348 (418)
T KOG1167|consen 269 LSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREI 348 (418)
T ss_pred ehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeecc
Confidence 99999999885321110 00 000 000 0 000000 01
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 282 YANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 282 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.....+..+.+|+.+|+..||.+|.|++++|.+
T Consensus 349 ~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 349 GSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred ccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 112234578999999999999999999999986
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=227.34 Aligned_cols=191 Identities=26% Similarity=0.294 Sum_probs=169.2
Q ss_pred ccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 66 IVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 66 ~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
+...+|.|++|.||++...+ ++.+++|.+...... ..+.+.+|++.+..++|+|++++++++......++++|+++++
T Consensus 3 ~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 82 (225)
T smart00221 3 LGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGG 82 (225)
T ss_pred eeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCC
Confidence 45667999999999999875 899999999876544 5678999999999999999999999999888999999999999
Q ss_pred ChhhhhhcCCCCC-CCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-----Ccc
Q 010932 144 TLSKHLFHWDKQP-LPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-----KSY 217 (497)
Q Consensus 144 ~L~~~l~~~~~~~-l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~~ 217 (497)
+|.+++... .. +++..+..++.+++.+|.+||..+ ++|+||+|+||+++.++.++|+|||.+...... ...
T Consensus 83 ~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 159 (225)
T smart00221 83 DLFDYLRKK--GGKLSEEEARFYLRQILEALEYLHSLG-IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTV 159 (225)
T ss_pred CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccce
Confidence 999998652 33 899999999999999999999998 999999999999999999999999998865543 345
Q ss_pred ccCCCCCCcccc-ccCCCCcccceeehhhhHHHHhhCCCCCCc
Q 010932 218 STNLAYTPPEFL-RTGRVIPESVIYSYGTVLLDLLSGKHIPPS 259 (497)
Q Consensus 218 ~gt~~y~aPE~~-~~~~~~~~~Dv~slG~~l~elltg~~~~~~ 259 (497)
.++..|++||.+ ....++.++||||||+++++|++|+.||..
T Consensus 160 ~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 160 KGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 677889999998 666788899999999999999999988854
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-29 Score=220.73 Aligned_cols=245 Identities=17% Similarity=0.175 Sum_probs=183.1
Q ss_pred cccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccC-CCCcceeeeee-eeeCCceEEEEEc
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGC-CAEGDERLLVAQY 139 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~-~~~~~~~~lv~e~ 139 (497)
.+.|.+.+|.|.||.+-++.++. ...+++|.+.... ....+|.+|..---.| .|.||+.-|++ |++.+..++++||
T Consensus 25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~ 103 (378)
T KOG1345|consen 25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF 103 (378)
T ss_pred hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence 46777888999999999999975 7899999987543 3467899998766556 48999998865 6777788899999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC--CCCCeeEcccCCccccCCCCc-
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD--EDGDPRLSSFGLMKNSRDGKS- 216 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~--~~~~~kl~Dfgla~~~~~~~~- 216 (497)
++.|+|.+-+. ..++-+.-..+++.|+++||.|+|+++ +||||||.+||||- +.-+|||||||+.+..+..-.
T Consensus 104 aP~gdL~snv~---~~GigE~~~K~v~~ql~SAi~fMHskn-lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~ 179 (378)
T KOG1345|consen 104 APRGDLRSNVE---AAGIGEANTKKVFAQLLSAIEFMHSKN-LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKY 179 (378)
T ss_pred CccchhhhhcC---cccccHHHHHHHHHHHHHHHHHhhccc-hhhcccccceEEEecCCccEEEeeecccccccCceehh
Confidence 99999998873 467889999999999999999999999 99999999999994 445899999999886554432
Q ss_pred cccCCCCCCcccccc---C--CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCC---HHHHH
Q 010932 217 YSTNLAYTPPEFLRT---G--RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA---NEDAT 288 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~---~--~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 288 (497)
..-+..|.+||.... + ...+.+|||.||+++|.++||..|................+.. +.....| ...++
T Consensus 180 ~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~-rk~~~~P~~F~~fs~ 258 (378)
T KOG1345|consen 180 LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLK-RKNPALPKKFNPFSE 258 (378)
T ss_pred hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhc-ccCccCchhhcccCH
Confidence 233567899997753 2 3578899999999999999999765422111111111111111 1111112 23567
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHH
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLS 313 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~ 313 (497)
.+..+.++-|..+|++|--..++-+
T Consensus 259 ~a~r~Fkk~lt~~~~drcki~~~kk 283 (378)
T KOG1345|consen 259 KALRLFKKSLTPRFKDRCKIWTAKK 283 (378)
T ss_pred HHHHHHHHhcCCcccccchhHHHHH
Confidence 7889999999999999944444433
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-29 Score=272.81 Aligned_cols=191 Identities=15% Similarity=0.120 Sum_probs=140.9
Q ss_pred cCCC-Ccceeeeeee-------eeCCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccc
Q 010932 114 NVRH-KRLVNLIGCC-------AEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH 185 (497)
Q Consensus 114 ~l~h-~niv~~~~~~-------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~ 185 (497)
.++| +||++++++| .....+++++|++ +++|.++|... ...+++..+..++.||+.||.|||++| |+||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~g-IvHr 104 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQG-IVVH 104 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCC-eeec
Confidence 4456 6888888887 2334577888887 67999999642 456999999999999999999999999 9999
Q ss_pred cCCCcceEeCC-------------------CCCeeEcccCCccccCCC--------------------CccccCCCCCCc
Q 010932 186 DLNAYRVLFDE-------------------DGDPRLSSFGLMKNSRDG--------------------KSYSTNLAYTPP 226 (497)
Q Consensus 186 Dlkp~Nill~~-------------------~~~~kl~Dfgla~~~~~~--------------------~~~~gt~~y~aP 226 (497)
||||+||||+. ++.+|++|||+++..... ....||+.||||
T Consensus 105 DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 184 (793)
T PLN00181 105 NVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSP 184 (793)
T ss_pred cCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceECh
Confidence 99999999954 455677777776532110 013468889999
Q ss_pred cccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 010932 227 EFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306 (497)
Q Consensus 227 E~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 306 (497)
|++.+..++.++|||||||+||||++|..|+.... ..+... ...... ............++.+||+.||.+||
T Consensus 185 E~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~-~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~L~~~P~~Rp 257 (793)
T PLN00181 185 EEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS-RTMSSL-RHRVLP-----PQILLNWPKEASFCLWLLHPEPSCRP 257 (793)
T ss_pred hhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH-HHHHHH-HHhhcC-----hhhhhcCHHHHHHHHHhCCCChhhCc
Confidence 99999999999999999999999999886543221 111000 000111 11111234467899999999999999
Q ss_pred CHHHHHHH
Q 010932 307 DVKFLLSA 314 (497)
Q Consensus 307 s~~~ll~~ 314 (497)
|+.+++++
T Consensus 258 s~~eil~h 265 (793)
T PLN00181 258 SMSELLQS 265 (793)
T ss_pred ChHHHhhc
Confidence 99999986
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.5e-28 Score=213.79 Aligned_cols=166 Identities=17% Similarity=0.117 Sum_probs=127.0
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCccccCCC
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA 222 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~gt~~ 222 (497)
|+|.+++... +..+++..++.|+.||+.||.|||+.+ ||+|||++.++.+|+ ||+++...... ..||+.
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~-------kp~Nil~~~~~~~~~--fG~~~~~~~~~-~~g~~~ 69 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQA-------KSGNILLTWDGLLKL--DGSVAFKTPEQ-SRVDPY 69 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhcC-------CcccEeEcCccceee--ccceEeecccc-CCCccc
Confidence 6889988652 457999999999999999999999886 999999999999999 99988654433 367899
Q ss_pred CCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccccccccc-C-CCCCHHHHH--HHHHHHHHhc
Q 010932 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSL-E-GQYANEDAT--QLVELASKCL 298 (497)
Q Consensus 223 y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~--~l~~li~~cl 298 (497)
|||||++.+..++.++|||||||++|||+||+.||............+........ . ...+...+. .+.+++.+||
T Consensus 70 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl 149 (176)
T smart00750 70 FMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCA 149 (176)
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHH
Confidence 99999999999999999999999999999999887432111000000000000000 0 011223333 6999999999
Q ss_pred ccCCCCCCCHHHHHHHhhhhh
Q 010932 299 QYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 299 ~~dp~~Rps~~~ll~~l~~~~ 319 (497)
+.||.+|||+.++++++..+.
T Consensus 150 ~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 150 SRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred hcccccccCHHHHHHHHHHHH
Confidence 999999999999999987764
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-28 Score=214.83 Aligned_cols=253 Identities=19% Similarity=0.269 Sum_probs=201.3
Q ss_pred CCcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
+++.+++-+|.....|..|+|+|. |..+++|++....... .+.|..|.-.|+.+.||||+.++|.|....++.++..
T Consensus 189 ~~~lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq 267 (448)
T KOG0195|consen 189 VSSLNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQ 267 (448)
T ss_pred hhhhhhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeee
Confidence 445566777788888999999996 4456668886543322 3579999999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccc-cCCCcceEeCCCCCeeEcccCCccccCCCCcc
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSY 217 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~-Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~ 217 (497)
|++.|+|.+.|+...+-.++-.++.+++..|++|++|||+..+++-| -|.+..|+||++.+.+|+ .+-.+.+-+....
T Consensus 268 ~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris-mad~kfsfqe~gr 346 (448)
T KOG0195|consen 268 YMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS-MADTKFSFQEVGR 346 (448)
T ss_pred eccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee-cccceeeeecccc
Confidence 99999999999886666778889999999999999999999877777 899999999999887774 2222222222233
Q ss_pred ccCCCCCCccccccCCC---CcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHH
Q 010932 218 STNLAYTPPEFLRTGRV---IPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~---~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 294 (497)
...|.||+||.++..+- -..+|+|||.++||||.|...||..... +..+ ..+.-+.++..+|+..+..+..|+
T Consensus 347 ~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlsp--mecg--mkialeglrv~ippgis~hm~klm 422 (448)
T KOG0195|consen 347 AYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSP--MECG--MKIALEGLRVHIPPGISRHMNKLM 422 (448)
T ss_pred ccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCc--hhhh--hhhhhccccccCCCCccHHHHHHH
Confidence 45789999999986543 3479999999999999999998854321 1111 122334556678888999999999
Q ss_pred HHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 295 SKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 295 ~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
.-|+..||.+||.+..|+-.|+++.
T Consensus 423 ~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 423 NICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHHhcCCCCcCCCcceehhhHHHhc
Confidence 9999999999999999998888764
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.3e-25 Score=212.44 Aligned_cols=156 Identities=17% Similarity=0.079 Sum_probs=121.9
Q ss_pred cccccccCCCCCCcEEEEEEEc--CCcEEEEEEccCCCC-----CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK--NNRLVAIKRFSRQSW-----PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
.|.+.+.||+|+||+||+|.++ +++.||||++..... ...+.|.+|+++|++++|+||+..+.. .+..++
T Consensus 19 ~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~~L 95 (365)
T PRK09188 19 RFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGKDGL 95 (365)
T ss_pred CceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCCcEE
Confidence 4566777899999999999875 478889998753311 124568999999999999999853322 245799
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccC-CCcceEeCCCCCeeEcccCCccccCCC
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDL-NAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dl-kp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
||||++|++|.... . . . ...++.+++.+|.|||+.| |+|||| ||+|||++.++.++|+|||+++.....
T Consensus 96 VmE~~~G~~L~~~~-~--~---~---~~~~~~~i~~aL~~lH~~g-IiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~ 165 (365)
T PRK09188 96 VRGWTEGVPLHLAR-P--H---G---DPAWFRSAHRALRDLHRAG-ITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRR 165 (365)
T ss_pred EEEccCCCCHHHhC-c--c---c---hHHHHHHHHHHHHHHHHCC-CeeCCCCCcceEEEcCCCCEEEEECccceecccC
Confidence 99999999996321 1 1 1 1467899999999999999 999999 999999999999999999999854432
Q ss_pred C------------ccccCCCCCCcccccc
Q 010932 215 K------------SYSTNLAYTPPEFLRT 231 (497)
Q Consensus 215 ~------------~~~gt~~y~aPE~~~~ 231 (497)
. ...+++.|+|||.+..
T Consensus 166 ~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 166 GALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred cchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 2 2345778999999864
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-23 Score=204.55 Aligned_cols=256 Identities=15% Similarity=0.128 Sum_probs=195.2
Q ss_pred cccccccCCCCCCcEEEEEEEcC--CcEEEEEEccCCCCCChhHHHHHHHHhccCCC----Ccceeeeeee-eeCCceEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN--NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRH----KRLVNLIGCC-AEGDERLL 135 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~~~~~~-~~~~~~~l 135 (497)
.+.+.+.||+|+||.||++...+ ...+|+|+...........+..|+.++..+.. +++..+++.. ..+...+|
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 67889999999999999999765 35899998876543333378889999988863 6889999888 47778899
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC-----CCeeEcccCCcc-
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED-----GDPRLSSFGLMK- 209 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~-----~~~kl~Dfgla~- 209 (497)
||+.+ |.+|.++......+.++..+...|+.|++.+|.++|+.| ++||||||.|+++... ..+.|.|||+++
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G-~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~ 176 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG-FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR 176 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC-cccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence 99988 899999886655688999999999999999999999999 9999999999999854 469999999998
Q ss_pred -ccC-C-------C----CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccccccc
Q 010932 210 -NSR-D-------G----KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDS 276 (497)
Q Consensus 210 -~~~-~-------~----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~ 276 (497)
... . . ..+.||..|+++....+...+.+-|+||++.++.+++.|..|......... ..........
T Consensus 177 ~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~~~~~~~ 255 (322)
T KOG1164|consen 177 FKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSKFEKDPRK 255 (322)
T ss_pred ccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHHHHHHhhh
Confidence 311 1 1 124489999999999999999999999999999999999855322211100 0001111000
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 277 SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 277 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
..........+..+..+...+-..+...+|....+...|+.....
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 256 LLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred hccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 011102233456677777777779999999999999987776543
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.5e-23 Score=200.43 Aligned_cols=248 Identities=25% Similarity=0.281 Sum_probs=193.4
Q ss_pred ccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCC---hhHHHHHHHHhccCCCC-cceeeeeeeeeCCceEEEEEc
Q 010932 64 ELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHK-RLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~lv~e~ 139 (497)
+.++..+|.|+||.||++... ..+++|.+....... ...+.+|+.++..+.|+ +|+.+.+++......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 355677899999999999986 789999997654433 56899999999999988 799999999777778999999
Q ss_pred CCCCChhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC-CeeEcccCCccccCC----
Q 010932 140 MPNDTLSKHLFHWDK-QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG-DPRLSSFGLMKNSRD---- 213 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~-~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~---- 213 (497)
+.++++.+++..... ..++......++.|++.++.|+|..+ ++|||+||+||+++..+ .++++|||.++....
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~-~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG-IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 999999977654211 27999999999999999999999999 99999999999999988 799999999874332
Q ss_pred ------CCccccCCCCCCcccccc---CCCCcccceeehhhhHHHHhhCCCCCCchhhH---HHhccccccccccccCCC
Q 010932 214 ------GKSYSTNLAYTPPEFLRT---GRVIPESVIYSYGTVLLDLLSGKHIPPSHALD---VIRGKNLLLLMDSSLEGQ 281 (497)
Q Consensus 214 ------~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 281 (497)
.....+|..|++||.+.+ ...+...|+||+|++++++++|..|+...... ......+.....+.....
T Consensus 159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (384)
T COG0515 159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASP 238 (384)
T ss_pred ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccc
Confidence 245678999999999987 57889999999999999999999885443210 000000010000001111
Q ss_pred CC----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 282 YA----NEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 282 ~~----~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.. ......+.+++..|+..+|..|.+..+....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 239 LSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 11 1123578899999999999999998877765
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-23 Score=181.69 Aligned_cols=253 Identities=15% Similarity=0.127 Sum_probs=193.9
Q ss_pred CcccccccCCCCCCcEEEEEEE-cCCcEEEEEEccCCCCCChhHHHHHHHHhccCC-CCcceeeeeeeeeCCceEEEEEc
Q 010932 62 SSELIVSESGDKAPNVVYRGRL-KNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
..+.++++||+|+||.+|.|.. .+|+.||||+-+.... -.++..|..+.+.++ ...|..+..+..+.....|||+.
T Consensus 15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdL 92 (341)
T KOG1163|consen 15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDL 92 (341)
T ss_pred cceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeeeec
Confidence 4578999999999999999994 5799999999765432 246888999999997 46888888899999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC---CCCCeeEcccCCccccCCC--
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD---EDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfgla~~~~~~-- 214 (497)
+ |.||.+++.- ....++..+++-++-|++.-++|+|.++ +|||||||+|+|.. ....+.|+|||+|+...+.
T Consensus 93 L-GPsLEdLfnf-C~R~ftmkTvLMLaDQml~RiEyvH~r~-fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t 169 (341)
T KOG1163|consen 93 L-GPSLEDLFNF-CSRRFTMKTVLMLADQMLSRIEYVHLRN-FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRT 169 (341)
T ss_pred c-CccHHHHHHH-HhhhhhHHhHHHHHHHHHHHHHHHHhhc-cccccCCccceeeccccccceEEEEeccchhhhccccc
Confidence 8 8999998754 3668999999999999999999999999 99999999999996 3456899999999864432
Q ss_pred ---------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCC---CC
Q 010932 215 ---------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEG---QY 282 (497)
Q Consensus 215 ---------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 282 (497)
....||..|.+=-...+...+.+-|+=|+|.+|..+.-|..|..+...... ......+.+....- ..
T Consensus 170 ~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk-~QKyEkI~EkK~s~~ie~L 248 (341)
T KOG1163|consen 170 RQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATK-KQKYEKISEKKMSTPIEVL 248 (341)
T ss_pred cccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhH-HHHHHHHHHhhcCCCHHHH
Confidence 345788899887777777778899999999999999999977655322211 11111111111111 11
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 283 ANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 283 ~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
....|.++.-.+.-|-..--++-|...-+-+.+..+..
T Consensus 249 C~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr 286 (341)
T KOG1163|consen 249 CKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFR 286 (341)
T ss_pred hCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHh
Confidence 22346678888888988888888887766666555543
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.3e-23 Score=187.43 Aligned_cols=168 Identities=11% Similarity=0.052 Sum_probs=131.7
Q ss_pred cccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhH---------HHHHHHHhccCCCCcceeeeeeeeeC---
Q 010932 63 SELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQ---------FVTEAAGLGNVRHKRLVNLIGCCAEG--- 130 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~---------~~~e~~~l~~l~h~niv~~~~~~~~~--- 130 (497)
.+++++.+|.|+||.||+... ++..+|||++.......... +.+|+..+.+++||+|..+..++...
T Consensus 32 ~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~ 110 (232)
T PRK10359 32 NIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERK 110 (232)
T ss_pred ceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccc
Confidence 467788889999999999666 57789999997654433222 68999999999999999999886533
Q ss_pred -----CceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEccc
Q 010932 131 -----DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSF 205 (497)
Q Consensus 131 -----~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Df 205 (497)
...+|||||++|.+|.++. .++. ....+++.+|..+|..| ++|+|+||+||+++.+| ++|+||
T Consensus 111 ~~~~~~~~~lvmEyi~G~tL~~~~------~~~~----~~~~~i~~~l~~lH~~g-i~H~Dikp~Nili~~~g-i~liDf 178 (232)
T PRK10359 111 TLRYAHTYIMLIEYIEGVELNDMP------EISE----DVKAKIKASIESLHQHG-MVSGDPHKGNFIVSKNG-LRIIDL 178 (232)
T ss_pred cccccCCeEEEEEEECCccHHHhh------hccH----HHHHHHHHHHHHHHHcC-CccCCCChHHEEEeCCC-EEEEEC
Confidence 3578999999999998864 1232 34669999999999999 99999999999999988 999999
Q ss_pred CCccccCCCCccccCCCCCCccccccCCCCcccceeehhhhHHHHh
Q 010932 206 GLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251 (497)
Q Consensus 206 gla~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ell 251 (497)
|..+........ ..++....++.++||||||+++..+.
T Consensus 179 g~~~~~~e~~a~--------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 179 SGKRCTAQRKAK--------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCcccccchhhH--------HHHHHHhHhcccccccceeEeehHHH
Confidence 987654322211 11444556778999999999987654
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.3e-23 Score=184.81 Aligned_cols=140 Identities=15% Similarity=0.145 Sum_probs=109.8
Q ss_pred cccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCC--C-------hhH-----------------HHHHHHHhccCCCCcc
Q 010932 67 VSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWP--D-------PHQ-----------------FVTEAAGLGNVRHKRL 120 (497)
Q Consensus 67 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~-------~~~-----------------~~~e~~~l~~l~h~ni 120 (497)
.+.||+|+||.||+|...+|+.||||+++..... . ... ..+|++.|.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4678999999999999878999999999754221 1 112 2349999999988877
Q ss_pred eeeeeeeeeCCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHH-HcCCCcccccCCCcceEeCCCCC
Q 010932 121 VNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHC-NSQNRKLYHDLNAYRVLFDEDGD 199 (497)
Q Consensus 121 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~l-h~~~~iiH~Dlkp~Nill~~~~~ 199 (497)
.....+.. ...+|||||++|+++...... ...++...+..++.|++.+|.++ |+.| ++||||||+|||++ ++.
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H~~g-iiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQDCR-LVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEE-CCc
Confidence 44333222 223899999998877654322 45789999999999999999999 6888 99999999999998 578
Q ss_pred eeEcccCCccccC
Q 010932 200 PRLSSFGLMKNSR 212 (497)
Q Consensus 200 ~kl~Dfgla~~~~ 212 (497)
++|+|||++....
T Consensus 156 v~LiDFG~a~~~~ 168 (190)
T cd05147 156 LYIIDVSQSVEHD 168 (190)
T ss_pred EEEEEccccccCC
Confidence 9999999987543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.2e-24 Score=210.42 Aligned_cols=224 Identities=20% Similarity=0.210 Sum_probs=187.8
Q ss_pred CCCCCCcEEEEEEE----cCCcEEEEEEccCCCCCC--hhHHHHHHHHhccCC-CCcceeeeeeeeeCCceEEEEEcCCC
Q 010932 70 SGDKAPNVVYRGRL----KNNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDERLLVAQYMPN 142 (497)
Q Consensus 70 lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~ 142 (497)
+|.|+||.|++++. ..|..+|+|++++..... ......|-.++..++ ||.+|++.-.+..+...++++++..|
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 59999999998863 238899999987643222 225566788888886 99999999999999999999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCccccCCC
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA 222 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~gt~~ 222 (497)
|.|...+.. ...+.+.....+...++-+++++|..+ ++|||+|++||+++.+|.+++.|||+++..-.....+||..
T Consensus 82 g~lft~l~~--~~~f~~~~~~~~~aelaLald~lh~l~-iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~e 158 (612)
T KOG0603|consen 82 GDLFTRLSK--EVMFDELDVAFYLAELALALDHLHKLG-IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYE 158 (612)
T ss_pred chhhhcccc--CCchHHHHHHHHHHHHHHHHhhcchhH-HHHhcccccceeecccCccccCCchhhhHhHhhhhcccchh
Confidence 999888754 567788888889999999999999999 99999999999999999999999999998766666699999
Q ss_pred CCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCC
Q 010932 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302 (497)
Q Consensus 223 y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 302 (497)
|||||++. .....+|+||||++++||+||..||.......+. ......|...+..+.+++..++..+|
T Consensus 159 ymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~~~~~Il----------~~~~~~p~~l~~~a~~~~~~l~~r~p 226 (612)
T KOG0603|consen 159 YRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGDTMKRIL----------KAELEMPRELSAEARSLFRQLFKRNP 226 (612)
T ss_pred hhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchHHHHHHh----------hhccCCchhhhHHHHHHHHHHHhhCH
Confidence 99999998 5677899999999999999999988662211111 11235677788899999999999999
Q ss_pred CCCCCH
Q 010932 303 KDRPDV 308 (497)
Q Consensus 303 ~~Rps~ 308 (497)
..|.-.
T Consensus 227 ~nrLg~ 232 (612)
T KOG0603|consen 227 ENRLGA 232 (612)
T ss_pred HHHhcc
Confidence 999744
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.9e-22 Score=184.07 Aligned_cols=250 Identities=16% Similarity=0.177 Sum_probs=193.3
Q ss_pred ccccccCCCCCCcEEEEEE-EcCCcEEEEEEccCCCCCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 64 ELIVSESGDKAPNVVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
++|.++||.|+||+.+.|. +-+++.||||.-...+ ..-++..|....+.| ..++|..++-+...+-+-.||+|.+
T Consensus 30 yrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL- 106 (449)
T KOG1165|consen 30 YRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL- 106 (449)
T ss_pred ceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-
Confidence 5778899999999999999 4579999999865443 345677888888777 4799999999999999999999998
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC-----CCeeEcccCCccccCCC--
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED-----GDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~-----~~~kl~Dfgla~~~~~~-- 214 (497)
|.||.+++ ...+..|+..++..|+.|++.-++++|++. +|.|||||+|+||..- ..+.|+|||+|+...+.
T Consensus 107 GPSLEDLF-D~CgR~FSvKTV~miA~Qmi~rie~vH~k~-LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~T 184 (449)
T KOG1165|consen 107 GPSLEDLF-DLCGRRFSVKTVAMIAKQMITRIEYVHEKD-LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKT 184 (449)
T ss_pred CcCHHHHH-HHhcCcccHHhHHHHHHHHHHHHHHHHhcc-eeecccCccceeecCCCCCCCceEEEEeccchhhhcCccc
Confidence 89999876 445789999999999999999999999999 9999999999999743 35899999999865433
Q ss_pred ---------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccC---CCC
Q 010932 215 ---------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLE---GQY 282 (497)
Q Consensus 215 ---------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 282 (497)
++..||..||+=-...+..-+.+-|+=|||-|+.+.|-|..|..+...+.... ....+-+.... ...
T Consensus 185 kqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~-kYeKIGe~Kr~T~i~~L 263 (449)
T KOG1165|consen 185 KQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKE-KYEKIGETKRSTPIEVL 263 (449)
T ss_pred cccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHH-HHHHhccccccCCHHHH
Confidence 35679999999999999999999999999999999999998766543222111 11111111111 011
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 283 ANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 283 ~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
....|.++..-+.-.-..+=.+-|...-+..-+..+.
T Consensus 264 c~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvl 300 (449)
T KOG1165|consen 264 CEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVL 300 (449)
T ss_pred HhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 2335667777777777777778888766655554443
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-23 Score=217.07 Aligned_cols=244 Identities=14% Similarity=0.088 Sum_probs=179.4
Q ss_pred cccCCCCCCcEEEEEEEc-CCcEEEEEEccCC--CCCChh----HHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 67 VSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQ--SWPDPH----QFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 67 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~----~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
...+|.|++|.|+..... ....++.|.+... ...... .+..|+-+-..++|||++..+..+.+.....-+|||
T Consensus 323 ~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~ 402 (601)
T KOG0590|consen 323 GRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEY 402 (601)
T ss_pred cceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhhc
Confidence 345699999977777643 3455555544311 111111 255677778888999998888777666555555999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-----
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----- 214 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 214 (497)
|++ +|..++.. ...++...+-.++.|++.|+.|+|+.| +.|||+||+|++++.+|.+||+|||.+......
T Consensus 403 ~~~-Dlf~~~~~--~~~~~~~e~~c~fKqL~~Gv~y~h~~G-iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~ 478 (601)
T KOG0590|consen 403 CPY-DLFSLVMS--NGKLTPLEADCFFKQLLRGVKYLHSMG-LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNI 478 (601)
T ss_pred ccH-HHHHHHhc--ccccchhhhhHHHHHHHHHHHHHHhcC-ceeccCccccEEEecCCceEEeecCcceeeccCcchhh
Confidence 999 99999854 357899999999999999999999999 999999999999999999999999998754322
Q ss_pred ---CccccCCCCCCccccccCCCCc-ccceeehhhhHHHHhhCCCCCCchhhHHHh---ccccccccccccCCCCCHHHH
Q 010932 215 ---KSYSTNLAYTPPEFLRTGRVIP-ESVIYSYGTVLLDLLSGKHIPPSHALDVIR---GKNLLLLMDSSLEGQYANEDA 287 (497)
Q Consensus 215 ---~~~~gt~~y~aPE~~~~~~~~~-~~Dv~slG~~l~elltg~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 287 (497)
....|+-.|+|||++.+..|++ ..||||.|+++..|++|+.|.......... .......-...-........+
T Consensus 479 ~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp 558 (601)
T KOG0590|consen 479 HESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLP 558 (601)
T ss_pred hhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhch
Confidence 2457788999999999999977 489999999999999998764322111000 000000000000111234467
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 288 TQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 288 ~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
...+.+|.++|+.||.+|.|+++|++.
T Consensus 559 ~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 559 RETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred hhHHHHHHHHccCChhheecHHHHhhC
Confidence 789999999999999999999999984
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-23 Score=216.98 Aligned_cols=247 Identities=17% Similarity=0.158 Sum_probs=181.0
Q ss_pred cccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCC-CCChhHHHHHHHH--hccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 63 SELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQS-WPDPHQFVTEAAG--LGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~--l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
+....+.||++.|=+|.+++++.|. |+||++-+.. .-..+.|.++++- ...++|||++.+.-+-....-.|||-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 4456677899999999999998887 9999986544 3334444443333 4455899999999888888888999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC----CCC
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR----DGK 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----~~~ 215 (497)
+ ..+|.+.|.. ++.+...+..-|+.|++.||..+|..| |+|+|||.+||||+.-.-+.|+||..-+..- +..
T Consensus 103 v-khnLyDRlST--RPFL~~iEKkWiaFQLL~al~qcH~~g-VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPa 178 (1431)
T KOG1240|consen 103 V-KHNLYDRLST--RPFLVLIEKKWIAFQLLKALSQCHKLG-VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPA 178 (1431)
T ss_pred H-hhhhhhhhcc--chHHHHHHHHHHHHHHHHHHHHHHHcC-ccccccccceEEEeeechhhhhcccccCCccCCCCCcc
Confidence 8 5679999865 678889999999999999999999999 9999999999999999999999998765321 111
Q ss_pred -------ccccCCCCCCccccccC-----------CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccc
Q 010932 216 -------SYSTNLAYTPPEFLRTG-----------RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSS 277 (497)
Q Consensus 216 -------~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~ 277 (497)
+.....+|+|||.+... ..+++.||||+||++.||++-..|++.- ......+.........
T Consensus 179 df~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L-SQL~aYr~~~~~~~e~ 257 (1431)
T KOG1240|consen 179 DFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL-SQLLAYRSGNADDPEQ 257 (1431)
T ss_pred cceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH-HHHHhHhccCccCHHH
Confidence 11223589999987531 1678899999999999999865443322 1111111110000001
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhh
Q 010932 278 LEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 278 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
....++ ...++.++..|++.||.+|.++++.|+.-.++
T Consensus 258 ~Le~Ie---d~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~ 295 (1431)
T KOG1240|consen 258 LLEKIE---DVSLRNLILSMIQRDPSKRLSAEDYLQKYRGL 295 (1431)
T ss_pred HHHhCc---CccHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence 111111 22588999999999999999999999974443
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.8e-22 Score=177.10 Aligned_cols=141 Identities=14% Similarity=0.149 Sum_probs=112.0
Q ss_pred cccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCC--------------------------hhHHHHHHHHhccCCCCcc
Q 010932 67 VSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD--------------------------PHQFVTEAAGLGNVRHKRL 120 (497)
Q Consensus 67 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~e~~~l~~l~h~ni 120 (497)
.+.||+|++|.||+|...+|+.||||+++...... ...+.+|.+.+.++.|++|
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46789999999999998789999999987642110 1124678999999999987
Q ss_pred eeeeeeeeeCCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCcccccCCCcceEeCCCCC
Q 010932 121 VNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNS-QNRKLYHDLNAYRVLFDEDGD 199 (497)
Q Consensus 121 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~-~~~iiH~Dlkp~Nill~~~~~ 199 (497)
.....+... ..+|||||++|+++...... ...++......++.+++.+|.++|+ .| ++||||||+|||++ ++.
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~--~~~~~~~~~~~i~~~l~~~l~~lH~~~g-ivHrDlkP~NIll~-~~~ 155 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLK--DVPLEEEEAEELYEQVVEQMRRLYQEAG-LVHGDLSEYNILYH-DGK 155 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhh--hccCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCChhhEEEE-CCC
Confidence 554444333 24899999998865433222 3567888999999999999999999 88 99999999999999 899
Q ss_pred eeEcccCCccccCC
Q 010932 200 PRLSSFGLMKNSRD 213 (497)
Q Consensus 200 ~kl~Dfgla~~~~~ 213 (497)
++|+|||+++....
T Consensus 156 ~~liDFG~a~~~~~ 169 (190)
T cd05145 156 PYIIDVSQAVELDH 169 (190)
T ss_pred EEEEEcccceecCC
Confidence 99999999986543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.3e-21 Score=168.76 Aligned_cols=179 Identities=16% Similarity=0.104 Sum_probs=137.3
Q ss_pred ccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCC----hhHHHHHHHHhccCC-CCcceeeeeeeeeCCceEEEEEcC
Q 010932 66 IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD----PHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 66 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~----~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
+...|++|+||+||.+.. .+..++.+.+.....-. ...+.+|+++|+++. |++|+.++++ +..+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 445679999999997766 67888888887554311 225889999999995 5889999886 3469999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccC-CCcceEeCCCCCeeEcccCCccccCCCCc---
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDL-NAYRVLFDEDGDPRLSSFGLMKNSRDGKS--- 216 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dl-kp~Nill~~~~~~kl~Dfgla~~~~~~~~--- 216 (497)
.|.+|...+.. ....++.|++.+|.++|..| |+|||| ||+|||++.+|.++|+|||++........
T Consensus 81 ~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~~G-IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r 150 (218)
T PRK12274 81 AGAAMYQRPPR---------GDLAYFRAARRLLQQLHRCG-VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMR 150 (218)
T ss_pred cCccHHhhhhh---------hhHHHHHHHHHHHHHHHHCc-CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHH
Confidence 99998754411 11357889999999999999 999999 79999999999999999999985443321
Q ss_pred --------------cccCCCCCCccccccC-CCC-cccceeehhhhHHHHhhCCCCCCc
Q 010932 217 --------------YSTNLAYTPPEFLRTG-RVI-PESVIYSYGTVLLDLLSGKHIPPS 259 (497)
Q Consensus 217 --------------~~gt~~y~aPE~~~~~-~~~-~~~Dv~slG~~l~elltg~~~~~~ 259 (497)
...++.|++|+...-. ..+ ...++++.|+.+|.++|++.+...
T Consensus 151 ~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 151 LLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 1136778888754422 233 567899999999999999976543
|
|
| >KOG0553 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.6e-21 Score=172.29 Aligned_cols=111 Identities=18% Similarity=0.290 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHH
Q 010932 384 QQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYM 463 (497)
Q Consensus 384 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 463 (497)
.....++.+...|+.+++.++|++|+..|++||+ ++|+|+..|.||+.+|.++|+|+.|++||+.||.+||.+.++|-+
T Consensus 76 e~~~~AE~LK~eGN~~m~~~~Y~eAv~kY~~AI~-l~P~nAVyycNRAAAy~~Lg~~~~AVkDce~Al~iDp~yskay~R 154 (304)
T KOG0553|consen 76 EDKALAESLKNEGNKLMKNKDYQEAVDKYTEAIE-LDPTNAVYYCNRAAAYSKLGEYEDAVKDCESALSIDPHYSKAYGR 154 (304)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh-cCCCcchHHHHHHHHHHHhcchHHHHHHHHHHHhcChHHHHHHHH
Confidence 3457788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 464 QALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 464 ~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
+|.+|+.+|+|++|+++|++||.|||.+..+|
T Consensus 155 LG~A~~~~gk~~~A~~aykKaLeldP~Ne~~K 186 (304)
T KOG0553|consen 155 LGLAYLALGKYEEAIEAYKKALELDPDNESYK 186 (304)
T ss_pred HHHHHHccCcHHHHHHHHHhhhccCCCcHHHH
Confidence 99999999999999999999999999988665
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.3e-21 Score=178.93 Aligned_cols=226 Identities=16% Similarity=0.167 Sum_probs=145.4
Q ss_pred ccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCC---CChhHHHHHHHHhccCCC----------Ccceeeeeee------
Q 010932 68 SESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSW---PDPHQFVTEAAGLGNVRH----------KRLVNLIGCC------ 127 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h----------~niv~~~~~~------ 127 (497)
+.||.|+++.||.+.+.. |+.+|||++..... ...+++.+|.-....+.+ -.++.-++..
T Consensus 18 ~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~~ 97 (288)
T PF14531_consen 18 RIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGKP 97 (288)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS-
T ss_pred cccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCCC
Confidence 457999999999999865 99999999854332 224567777766655432 1222222221
Q ss_pred ---eeCC--------ceEEEEEcCCCCChhhhhh---cCCC--CCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcc
Q 010932 128 ---AEGD--------ERLLVAQYMPNDTLSKHLF---HWDK--QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYR 191 (497)
Q Consensus 128 ---~~~~--------~~~lv~e~~~~~~L~~~l~---~~~~--~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~N 191 (497)
.... +.+++|+-+ .++|..++. .... ..+....+..+..|+++.+++||+.| ++|+||+|+|
T Consensus 98 ~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G-lVHgdi~~~n 175 (288)
T PF14531_consen 98 PFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG-LVHGDIKPEN 175 (288)
T ss_dssp SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EEEST-SGGG
T ss_pred cceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc-eEecccceee
Confidence 1111 236677776 567877653 2111 12445556677899999999999999 9999999999
Q ss_pred eEeCCCCCeeEcccCCccccCCCCc-cccCCCCCCcccccc--------CCCCcccceeehhhhHHHHhhCCCCCCchhh
Q 010932 192 VLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAYTPPEFLRT--------GRVIPESVIYSYGTVLLDLLSGKHIPPSHAL 262 (497)
Q Consensus 192 ill~~~~~~kl~Dfgla~~~~~~~~-~~gt~~y~aPE~~~~--------~~~~~~~Dv~slG~~l~elltg~~~~~~~~~ 262 (497)
++++.+|.++|+||+.......... ...+..|.+||.... -.++.+.|.|+||+++|.|++|+.||.....
T Consensus 176 fll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~ 255 (288)
T PF14531_consen 176 FLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSP 255 (288)
T ss_dssp EEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGG
T ss_pred EEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCc
Confidence 9999999999999987765444333 344577999997753 2478899999999999999999988754321
Q ss_pred HHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCC
Q 010932 263 DVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDR 305 (497)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 305 (497)
...... ....+. +.++.+..||..+|+.||.+|
T Consensus 256 ~~~~~~---------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 256 EADPEW---------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp GSTSGG---------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred cccccc---------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 111111 122344 688899999999999999988
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.8e-20 Score=166.00 Aligned_cols=131 Identities=11% Similarity=0.035 Sum_probs=104.7
Q ss_pred cCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccC-----CCCcceeeeeeeeeCC---c-eEEEEE
Q 010932 69 ESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNV-----RHKRLVNLIGCCAEGD---E-RLLVAQ 138 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~~~~~~~~---~-~~lv~e 138 (497)
.||+|+||.||. +.. +.. +||++........+.+.+|+.+++.+ .||||++++|++.++. . ..+|+|
T Consensus 9 ~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e 85 (210)
T PRK10345 9 PLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIAD 85 (210)
T ss_pred eecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEec
Confidence 459999999996 443 444 69998765444567899999999999 5799999999998863 3 347899
Q ss_pred c--CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHH-HHHHcCCCcccccCCCcceEeCC----CCCeeEcccCCc
Q 010932 139 Y--MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQAL-DHCNSQNRKLYHDLNAYRVLFDE----DGDPRLSSFGLM 208 (497)
Q Consensus 139 ~--~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L-~~lh~~~~iiH~Dlkp~Nill~~----~~~~kl~Dfgla 208 (497)
| +++++|.+++.. ..+++. ..++.+++.++ .|||+++ |+||||||+|||++. ++.++|+||+.+
T Consensus 86 ~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~~-IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 86 FDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDNR-IVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred CCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 9 567999999954 346655 36688888888 8999999 999999999999974 347999995543
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.8e-20 Score=182.64 Aligned_cols=208 Identities=20% Similarity=0.300 Sum_probs=161.4
Q ss_pred hccCCCCcceeeeeeeeeCCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcc
Q 010932 112 LGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYR 191 (497)
Q Consensus 112 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~N 191 (497)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.+.+.. ..-.+++.-...+.+.|+.||.|+|+.....|+.+++.|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 4678899999999999999999999999999999999976 456789999999999999999999988734899999999
Q ss_pred eEeCCCCCeeEcccCCccccCCC------CccccCCCCCCccccccC-------CCCcccceeehhhhHHHHhhCCCCCC
Q 010932 192 VLFDEDGDPRLSSFGLMKNSRDG------KSYSTNLAYTPPEFLRTG-------RVIPESVIYSYGTVLLDLLSGKHIPP 258 (497)
Q Consensus 192 ill~~~~~~kl~Dfgla~~~~~~------~~~~gt~~y~aPE~~~~~-------~~~~~~Dv~slG~~l~elltg~~~~~ 258 (497)
.++|....+||+|||+....... .......-|.|||.++.. ..+.++||||||++++|+++.+.|+.
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~ 159 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFD 159 (484)
T ss_pred ceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccc
Confidence 99999999999999998765321 111223569999999763 14678999999999999999999886
Q ss_pred chhhHHHhccccccc---cccccCCCCC--HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 259 SHALDVIRGKNLLLL---MDSSLEGQYA--NEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 259 ~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
...........+..+ .....++... ....+.+..++..||..+|..||+++.+-..++.+..
T Consensus 160 ~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 160 LRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred cccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 532221111111111 1111222222 1344579999999999999999999999988877754
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.7e-20 Score=179.18 Aligned_cols=167 Identities=19% Similarity=0.275 Sum_probs=126.7
Q ss_pred ceEEEEEcCCCCChhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccc
Q 010932 132 ERLLVAQYMPNDTLSKHLFHW-DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN 210 (497)
Q Consensus 132 ~~~lv~e~~~~~~L~~~l~~~-~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 210 (497)
.+++.|++|...+|.+||.++ .....++...+.++.|++.|+.| ++ .+|+|+||.||++..+..+||+|||+...
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~-~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG-LIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc-chhhhccccccccccchhhhhhhhhheee
Confidence 578999999999999999743 34567888999999999999999 77 99999999999999999999999999875
Q ss_pred cCCC----------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhC-CCCCCch-hhHHHhcccccccccccc
Q 010932 211 SRDG----------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSG-KHIPPSH-ALDVIRGKNLLLLMDSSL 278 (497)
Q Consensus 211 ~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg-~~~~~~~-~~~~~~~~~~~~~~~~~~ 278 (497)
.... ....||..||+||.+.+..|+.|+||||||++|+|+++- ...+... ....+. ...+++..
T Consensus 406 ~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r----~g~ip~~~ 481 (516)
T KOG1033|consen 406 QDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIR----DGIIPPEF 481 (516)
T ss_pred cccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhh----cCCCChHH
Confidence 4332 245789999999999999999999999999999999982 2111100 001111 11111111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010932 279 EGQYANEDATQLVELASKCLQYEAKDRPDVKFL 311 (497)
Q Consensus 279 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~l 311 (497)
..++ +.-..|+.+++...|.+||++.+.
T Consensus 482 ~~d~-----p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 482 LQDY-----PEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred hhcC-----cHHHHHHHHhcCCCcccCchHHHH
Confidence 1122 234589999999999999955443
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.4e-19 Score=167.49 Aligned_cols=190 Identities=12% Similarity=0.164 Sum_probs=141.5
Q ss_pred CCCcceeeeeeeeeC---------------------------CceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHH
Q 010932 116 RHKRLVNLIGCCAEG---------------------------DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYY 168 (497)
Q Consensus 116 ~h~niv~~~~~~~~~---------------------------~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~ 168 (497)
+|||||++.++|.+. ..+|+||.-.+ .+|..++.. ...+.....-++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~---~~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWT---RHRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhc---CCCchHHHHHHHHH
Confidence 599999999877431 23678887663 678888853 45677788899999
Q ss_pred HHHHHHHHHcCCCcccccCCCcceEeC--CCC--CeeEcccCCccccCCC----------CccccCCCCCCccccccCC-
Q 010932 169 IAQALDHCNSQNRKLYHDLNAYRVLFD--EDG--DPRLSSFGLMKNSRDG----------KSYSTNLAYTPPEFLRTGR- 233 (497)
Q Consensus 169 i~~~L~~lh~~~~iiH~Dlkp~Nill~--~~~--~~kl~Dfgla~~~~~~----------~~~~gt~~y~aPE~~~~~~- 233 (497)
+++|+.|||.+| |.|||+|++|||+. +++ .+.|+|||.+--.... -...|.-.-||||+....+
T Consensus 350 lLEav~hL~~hg-vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PG 428 (598)
T KOG4158|consen 350 LLEAVTHLHKHG-VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPG 428 (598)
T ss_pred HHHHHHHHHHcc-chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCC
Confidence 999999999999 99999999999994 444 4789999976533221 1345677889999987532
Q ss_pred -----CCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 010932 234 -----VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDV 308 (497)
Q Consensus 234 -----~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 308 (497)
.-.|+|.|+.|.+.||+++...||+....-....... .+...+..|..+++.+.+|+...|+.||.+|++.
T Consensus 429 p~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Y----qe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp 504 (598)
T KOG4158|consen 429 PNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTY----QESQLPALPSRVPPVARQLVFDLLKRDPSKRVSP 504 (598)
T ss_pred CceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhh----hhhhCCCCcccCChHHHHHHHHHhcCCccccCCc
Confidence 2358999999999999999999997632222211111 1122345567788899999999999999999987
Q ss_pred HHHHHH
Q 010932 309 KFLLSA 314 (497)
Q Consensus 309 ~~ll~~ 314 (497)
.-....
T Consensus 505 ~iAANv 510 (598)
T KOG4158|consen 505 NIAANV 510 (598)
T ss_pred cHHHhH
Confidence 654443
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.1e-19 Score=163.91 Aligned_cols=154 Identities=14% Similarity=0.091 Sum_probs=115.8
Q ss_pred HHHHHHhcCCCcccccccCCCCCCcEEEEEE--EcCCcEEEEEEccCCCCC-------------------C-----hhHH
Q 010932 52 ADLRAATNGFSSELIVSESGDKAPNVVYRGR--LKNNRLVAIKRFSRQSWP-------------------D-----PHQF 105 (497)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~--~~~~~~vavK~~~~~~~~-------------------~-----~~~~ 105 (497)
.++....+.-..+.+.+.||.|+||.||+|. ..+|+.||||+++..... . ...+
T Consensus 18 ~~~~~~~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (237)
T smart00090 18 LALYSLLNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWA 97 (237)
T ss_pred HHHHHHHhcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHH
Confidence 3344444443456777889999999999998 457999999998754211 0 1235
Q ss_pred HHHHHHhccCCCCc--ceeeeeeeeeCCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcc
Q 010932 106 VTEAAGLGNVRHKR--LVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKL 183 (497)
Q Consensus 106 ~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~ii 183 (497)
.+|+.++.++.+.+ +..+++. ...++||||++|++|...... ...+.......++.||+.+|.+||..|.++
T Consensus 98 ~~E~~~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~g~ii 171 (237)
T smart00090 98 EKEFRNLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLK--DVEPEEEEEFELYDDILEEMRKLYKEGELV 171 (237)
T ss_pred HHHHHHHHHHHhcCCCCCeeeEe----cCceEEEEEecCCcccccccc--cCCcchHHHHHHHHHHHHHHHHHHhcCCEE
Confidence 68999999997533 3444432 234899999999888765422 345666677899999999999999987799
Q ss_pred cccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 184 YHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 184 H~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
|+||||+||+++ ++.++|+|||.+....
T Consensus 172 H~Dikp~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 172 HGDLSEYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred eCCCChhhEEEE-CCCEEEEEChhhhccC
Confidence 999999999999 8899999999987443
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.3e-20 Score=189.92 Aligned_cols=201 Identities=19% Similarity=0.163 Sum_probs=146.5
Q ss_pred cccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
+.+.|+.+..|++|.||.++++. .+.+|+|+ .+... +.+- +|.....|.+|
T Consensus 84 df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l-----ilRn--ilt~a~npfvv-------------------- 135 (1205)
T KOG0606|consen 84 DFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL-----ILRN--ILTFAGNPFVV-------------------- 135 (1205)
T ss_pred ccceeEeeccCCCCceeeeeccccccchhhcc-cccch-----hhhc--cccccCCccee--------------------
Confidence 44677778999999999999875 77899843 32221 2221 33333445444
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC--------
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD-------- 213 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-------- 213 (497)
|+=...+.. .+.++... +.+++|||+.+ |+|||+||+|.+|+.-|++|++|||+++....
T Consensus 136 -gDc~tllk~--~g~lPvdm--------vla~Eylh~yg-ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~e 203 (1205)
T KOG0606|consen 136 -GDCATLLKN--IGPLPVDM--------VLAVEYLHSYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKE 203 (1205)
T ss_pred -chhhhhccc--CCCCcchh--------hHHhHhhccCC-eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhh
Confidence 222222322 34555433 77899999999 99999999999999999999999999874211
Q ss_pred -----------CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCC
Q 010932 214 -----------GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282 (497)
Q Consensus 214 -----------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (497)
.+..+|||.|+|||++....|...+|+|++|+++||.+.|..||+++..+.+...-+.. .....+-
T Consensus 204 g~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd---~i~wpE~ 280 (1205)
T KOG0606|consen 204 GHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISD---DIEWPEE 280 (1205)
T ss_pred cchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhh---hcccccc
Confidence 13458999999999999999999999999999999999999999887555443332221 1122233
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCC
Q 010932 283 ANEDATQLVELASKCLQYEAKDRP 306 (497)
Q Consensus 283 ~~~~~~~l~~li~~cl~~dp~~Rp 306 (497)
....+.++.+++.++|+.+|..|.
T Consensus 281 dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 281 DEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred CcCCCHHHHHHHHHHHHhChHhhc
Confidence 445677899999999999999996
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-18 Score=160.14 Aligned_cols=134 Identities=15% Similarity=0.161 Sum_probs=113.6
Q ss_pred ccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCC--------hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 68 SESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD--------PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
+.||+|++|.||+|.+ .|..|+||+........ ...+.+|+.++..++|++|+....++......++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 4679999999999998 67789999876433221 13578899999999999988877777777788999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccc
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN 210 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 210 (497)
++|++|.+++... .. .+..++.+++.+|.++|+.+ ++|+|++|.|||++ ++.++|+|||.+..
T Consensus 81 ~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~~-i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSAG-IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhCC-cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999988541 12 78899999999999999999 99999999999999 88999999998764
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.8e-18 Score=183.11 Aligned_cols=239 Identities=13% Similarity=0.164 Sum_probs=172.5
Q ss_pred cccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCC---CCcceeeeeeeeeCCceEEEEEc
Q 010932 63 SELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR---HKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
.+.|-+.+|.|+||+||+|...+|+.||+|+=+.... -+|.--.+++.+|+ -+.|..+...+.-.+.-+||+||
T Consensus 699 ~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey 775 (974)
T KOG1166|consen 699 KFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEY 775 (974)
T ss_pred eEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeec
Confidence 3455578999999999999988899999999765432 12333344444554 34555666666666667999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC-------CCCCeeEcccCCcccc-
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD-------EDGDPRLSSFGLMKNS- 211 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~-------~~~~~kl~Dfgla~~~- 211 (497)
.+.|||.+++. ..+.+++..+..+..|+++-+.+||..+ |||+||||+|+||. .+..++|+|||.+..+
T Consensus 776 ~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~-IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~ 852 (974)
T KOG1166|consen 776 SPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMG-IIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMK 852 (974)
T ss_pred cccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcc-eecccCCcceeEeecccCCCCcccceEEEecccceeee
Confidence 99999999997 3778999999999999999999999999 99999999999994 2346999999998643
Q ss_pred --CCCC---ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHH
Q 010932 212 --RDGK---SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANED 286 (497)
Q Consensus 212 --~~~~---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (497)
.+.. ..++|-.+-.+|...|..++...|.|.|..+++-||.|+.. . ...+.... ++.. ++...
T Consensus 853 lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~------q-~~~g~~~~-~~~~----~~Ry~ 920 (974)
T KOG1166|consen 853 LFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM------E-VKNGSSWM-VKTN----FPRYW 920 (974)
T ss_pred EcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH------H-hcCCccee-cccc----chhhh
Confidence 2332 34567789999999999999999999999999999999842 1 11111111 1111 11112
Q ss_pred HHH-HHHHHHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 287 ATQ-LVELASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 287 ~~~-l~~li~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
-.+ .-+|...+|..|-..=|...++...++...
T Consensus 921 ~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~ 954 (974)
T KOG1166|consen 921 KRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVL 954 (974)
T ss_pred hHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHH
Confidence 222 335666677744444466667766666554
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.7e-18 Score=155.09 Aligned_cols=129 Identities=18% Similarity=0.212 Sum_probs=106.5
Q ss_pred CCCCCCcEEEEEEEcCCcEEEEEEccCCCCCC--------hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 70 SGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD--------PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 70 lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
||+|+||+||+|.+ +|..|++|+........ ..++.+|++++..++|+++.....++......++||||++
T Consensus 2 ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 2 IAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence 69999999999996 57889999865432211 2457789999999998876665556666677899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN 210 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 210 (497)
|++|.+++... .. .++.+++.+|.++|+.+ ++|+|++|.||+++ ++.++++|||++..
T Consensus 81 g~~l~~~~~~~--~~-------~~~~~i~~~l~~lH~~g-i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 81 GKPLKDVIEEG--ND-------ELLREIGRLVGKLHKAG-IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CccHHHHHhhc--HH-------HHHHHHHHHHHHHHHCC-eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999887431 11 88999999999999999 99999999999999 89999999998764
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.7e-18 Score=153.10 Aligned_cols=136 Identities=17% Similarity=0.138 Sum_probs=107.0
Q ss_pred ccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCC----------------------ChhHHHHHHHHhccCCCCc--
Q 010932 64 ELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWP----------------------DPHQFVTEAAGLGNVRHKR-- 119 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~e~~~l~~l~h~n-- 119 (497)
+.+.+.||.|+||.||++...+|+.||||++...... ....+.+|+.++..+.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 4556778999999999999888999999987643210 0123677899999887774
Q ss_pred ceeeeeeeeeCCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCC
Q 010932 120 LVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGD 199 (497)
Q Consensus 120 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~ 199 (497)
++..++ ....++||||++|++|..... ......++.+++.++.++|..+ ++|+||||+||+++.++.
T Consensus 97 v~~~~~----~~~~~lv~e~~~g~~L~~~~~--------~~~~~~~~~~i~~~l~~lh~~g-i~H~Dl~p~Nill~~~~~ 163 (198)
T cd05144 97 VPKPID----WNRHAVVMEYIDGVELYRVRV--------LEDPEEVLDEILEEIVKAYKHG-IIHGDLSEFNILVDDDEK 163 (198)
T ss_pred CCceee----cCCceEEEEEeCCcchhhccc--------cccHHHHHHHHHHHHHHHHHCC-CCcCCCCcccEEEcCCCc
Confidence 444443 234589999999999876542 1345678899999999999999 999999999999999999
Q ss_pred eeEcccCCccccC
Q 010932 200 PRLSSFGLMKNSR 212 (497)
Q Consensus 200 ~kl~Dfgla~~~~ 212 (497)
++|+|||.+....
T Consensus 164 ~~liDfg~~~~~~ 176 (198)
T cd05144 164 IYIIDWPQMVSTD 176 (198)
T ss_pred EEEEECCccccCC
Confidence 9999999986544
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.5e-17 Score=141.85 Aligned_cols=116 Identities=16% Similarity=0.124 Sum_probs=108.5
Q ss_pred hhHHHHHH-HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCC
Q 010932 379 FQEWTQQV-QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEW 457 (497)
Q Consensus 379 ~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 457 (497)
...|++++ -++..++.+|..++..|+|++|+..|++++. ++|+++.+|+++|.++..+|++++|+..|++|++++|++
T Consensus 13 ~~~~~~al~~~p~~~~~~g~~~~~~g~~~~A~~~~~~al~-~~P~~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~~ 91 (144)
T PRK15359 13 EDILKQLLSVDPETVYASGYASWQEGDYSRAVIDFSWLVM-AQPWSWRAHIALAGTWMMLKEYTTAINFYGHALMLDASH 91 (144)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-cCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC
Confidence 34566666 3455688899999999999999999999999 999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 458 PTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 458 ~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
+.+|+++|.++..+|++++|+.+|++|++++|++..+|
T Consensus 92 ~~a~~~lg~~l~~~g~~~eAi~~~~~Al~~~p~~~~~~ 129 (144)
T PRK15359 92 PEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADASWS 129 (144)
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 99999999999999999999999999999999998876
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.8e-17 Score=172.72 Aligned_cols=132 Identities=17% Similarity=0.178 Sum_probs=107.8
Q ss_pred ccccCCCCCCcEEEEEEEcCCcEEEEEEc-cCC-CCC------ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 66 IVSESGDKAPNVVYRGRLKNNRLVAIKRF-SRQ-SWP------DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 66 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~-~~~-~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
..+.||+|+||+||++.+.+. .+++|+. ... ... ..+.+.+|++++..++|++|+....++......++||
T Consensus 337 ~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 415 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVM 415 (535)
T ss_pred ccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEE
Confidence 345679999999999987543 3444442 211 111 1246889999999999999998887777777889999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccc
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN 210 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 210 (497)
||++|++|.+++. ....++.+++.+|.+||+.+ ++||||||+|||+ .++.++|+|||+++.
T Consensus 416 E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~g-iiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 416 EYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAG-IVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred EecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCC-CccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 9999999999873 35789999999999999999 9999999999999 678999999999874
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.3e-17 Score=161.45 Aligned_cols=137 Identities=12% Similarity=0.101 Sum_probs=132.8
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRAL 432 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~ 432 (497)
..++.+.++|..+.+++.++.|...|.+++ .-+.+..++|.+|-++|++++|+.+|++||+ ++|+.+++|.|+|.
T Consensus 352 ~hadam~NLgni~~E~~~~e~A~~ly~~al~v~p~~aaa~nNLa~i~kqqgnl~~Ai~~Ykealr-I~P~fAda~~NmGn 430 (966)
T KOG4626|consen 352 NHADAMNNLGNIYREQGKIEEATRLYLKALEVFPEFAAAHNNLASIYKQQGNLDDAIMCYKEALR-IKPTFADALSNMGN 430 (966)
T ss_pred ccHHHHHHHHHHHHHhccchHHHHHHHHHHhhChhhhhhhhhHHHHHHhcccHHHHHHHHHHHHh-cCchHHHHHHhcch
Confidence 467889999999999999999999999999 6788999999999999999999999999999 99999999999999
Q ss_pred HHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccC
Q 010932 433 SYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 433 ~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
+|-.+|+.++|+.+|.+||.++|.+++|+.++|.+|...|+..+|+..|+.|++|+|+.++|
T Consensus 431 t~ke~g~v~~A~q~y~rAI~~nPt~AeAhsNLasi~kDsGni~~AI~sY~~aLklkPDfpdA 492 (966)
T KOG4626|consen 431 TYKEMGDVSAAIQCYTRAIQINPTFAEAHSNLASIYKDSGNIPEAIQSYRTALKLKPDFPDA 492 (966)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCcHHHHHHhhHHHHhhccCCcHHHHHHHHHHHccCCCCchh
Confidence 99999999999999999999999999999999999999999999999999999999999887
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.6e-17 Score=157.78 Aligned_cols=136 Identities=16% Similarity=0.297 Sum_probs=120.1
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHH------------------------------HHHHHHHHHHhHHhhcccHHH
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQV------------------------------QDMLNTKKFGDIAFRDKDFKN 407 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~------------------------------~~~~~~~~~g~~~~~~~~~~~ 407 (497)
+...+...|..+..++.++.+++.|.+++ +.+...+..|+.+|+.|+|..
T Consensus 297 Iak~~~r~g~a~~k~~~~~~ai~~~~kaLte~Rt~~~ls~lk~~Ek~~k~~e~~a~~~pe~A~e~r~kGne~Fk~gdy~~ 376 (539)
T KOG0548|consen 297 IAKALARLGNAYTKREDYEGAIKYYQKALTEHRTPDLLSKLKEAEKALKEAERKAYINPEKAEEEREKGNEAFKKGDYPE 376 (539)
T ss_pred HHHHHHHhhhhhhhHHhHHHHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHhccCHHH
Confidence 33444556777777777777777777665 234556778999999999999
Q ss_pred HHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcC
Q 010932 408 AIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASF 487 (497)
Q Consensus 408 Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l 487 (497)
|+..|++||. .+|+++.+|.|||.||.++|++..|++|++++++++|++..+|++.|.++..+.+|++|+++|.+|+++
T Consensus 377 Av~~YteAIk-r~P~Da~lYsNRAac~~kL~~~~~aL~Da~~~ieL~p~~~kgy~RKg~al~~mk~ydkAleay~eale~ 455 (539)
T KOG0548|consen 377 AVKHYTEAIK-RDPEDARLYSNRAACYLKLGEYPEALKDAKKCIELDPNFIKAYLRKGAALRAMKEYDKALEAYQEALEL 455 (539)
T ss_pred HHHHHHHHHh-cCCchhHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccC
Q 010932 488 EAKKQNS 494 (497)
Q Consensus 488 ~~~~~~~ 494 (497)
||++..+
T Consensus 456 dp~~~e~ 462 (539)
T KOG0548|consen 456 DPSNAEA 462 (539)
T ss_pred CchhHHH
Confidence 9987653
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.3e-17 Score=140.30 Aligned_cols=135 Identities=14% Similarity=0.061 Sum_probs=114.1
Q ss_pred ccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCC--CcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 66 IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRH--KRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 66 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
+++.+|.|.++.||++...+ ..++||+...... ...+.+|+.++..++| .++++++++....+..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35678999999999999854 7899999876543 4679999999999976 58999998888878899999999887
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCcccccCCCcceEeCCCCCeeEcccCCccccCC
Q 010932 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQ---NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD 213 (497)
Q Consensus 144 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~---~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 213 (497)
.+..+ +......++.+++.+|..+|.. + ++|+|++|+||+++..+.+++.|||.+.....
T Consensus 79 ~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~-i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~~ 141 (155)
T cd05120 79 TLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLV-LCHGDLHPGNILVDDGKILGIIDWEYAGYGPP 141 (155)
T ss_pred ecccC---------CHHHHHHHHHHHHHHHHHHhCCCceE-EEecCCCcceEEEECCcEEEEEecccccCCCh
Confidence 76543 5667788999999999999985 5 99999999999999989999999999875433
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.2e-16 Score=143.56 Aligned_cols=136 Identities=17% Similarity=0.160 Sum_probs=97.3
Q ss_pred cccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCC--hhHH----------------------HHHHHHhccCCCCc--c
Q 010932 67 VSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD--PHQF----------------------VTEAAGLGNVRHKR--L 120 (497)
Q Consensus 67 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~----------------------~~e~~~l~~l~h~n--i 120 (497)
.+.||+|+||+||+|...+|+.||||++....... ...+ ..|...+..+.+.+ +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 45689999999999998789999999987542211 1111 34555555554332 3
Q ss_pred eeeeeeeeeCCceEEEEEcCCCCChhhh-hhcCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCcccccCCCcceEeCCCC
Q 010932 121 VNLIGCCAEGDERLLVAQYMPNDTLSKH-LFHWDKQPLPWEMRVRVAYYIAQALDHCNS-QNRKLYHDLNAYRVLFDEDG 198 (497)
Q Consensus 121 v~~~~~~~~~~~~~lv~e~~~~~~L~~~-l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~-~~~iiH~Dlkp~Nill~~~~ 198 (497)
.+.++. ...++||||++++++... +.. .... .....++.+++.++.++|. .+ ++|+||||+||+++ ++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~---~~~~-~~~~~~~~~~~~~l~~lh~~~~-ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKD---VRLL-EDPEELYDQILELMRKLYREAG-LVHGDLSEYNILVD-DG 151 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhh---hhhc-ccHHHHHHHHHHHHHHHhhccC-cCcCCCChhhEEEE-CC
Confidence 334432 245899999998544321 111 0111 6678999999999999999 88 99999999999999 99
Q ss_pred CeeEcccCCccccC
Q 010932 199 DPRLSSFGLMKNSR 212 (497)
Q Consensus 199 ~~kl~Dfgla~~~~ 212 (497)
.++|+|||.+....
T Consensus 152 ~~~liDfg~a~~~~ 165 (187)
T cd05119 152 KVYIIDVPQAVEID 165 (187)
T ss_pred cEEEEECccccccc
Confidence 99999999987443
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.9e-18 Score=174.45 Aligned_cols=248 Identities=18% Similarity=0.136 Sum_probs=188.2
Q ss_pred cccccccCCCCCCcEEEEEEEcC--CcEEEEEEccCCC--CCChhHHHHHHHHhccCC-CCcceeeeeeeeeCCceEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN--NRLVAIKRFSRQS--WPDPHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 137 (497)
.+.+++.+|.|+|+.|-...... ...+|+|.+.... .........|..+=..+. |+|++.+++.....+..++++
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 44566667999999998887533 5577777776543 222344555777777776 999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHH-cCCCcccccCCCcceEeCCCC-CeeEcccCCccccCC-C
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCN-SQNRKLYHDLNAYRVLFDEDG-DPRLSSFGLMKNSRD-G 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh-~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~-~ 214 (497)
+|..|+++..-+........+......++.|+..++.|+| ..+ +.|+||||+|.+++..+ ..+++|||+|..... .
T Consensus 101 ~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~-~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~ 179 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG-VTHRDIKPSNSLLDESGSALKIADFGLATAYRNKN 179 (601)
T ss_pred CcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc-cccCCCCCccchhccCCCcccCCCchhhccccccC
Confidence 9999999998884322336777788899999999999999 888 99999999999999999 999999999986554 2
Q ss_pred ------Ccccc-CCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccccccccc--CCCCCH
Q 010932 215 ------KSYST-NLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSL--EGQYAN 284 (497)
Q Consensus 215 ------~~~~g-t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 284 (497)
...+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|........ .....+..... ......
T Consensus 180 g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 256 (601)
T KOG0590|consen 180 GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD---GRYSSWKSNKGRFTQLPWN 256 (601)
T ss_pred CcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc---ccceeecccccccccCccc
Confidence 13467 9999999999874 45778999999999999999997653321111 22222222211 122234
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 285 EDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 285 ~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..+....+++.+++..+|..|.+.+++-..
T Consensus 257 ~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 257 SISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred cCChhhhhcccccccCCchhcccccccccc
Confidence 456678899999999999999998877654
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.5e-16 Score=155.80 Aligned_cols=137 Identities=10% Similarity=0.057 Sum_probs=123.3
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRAL 432 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~ 432 (497)
.+.+++.++|.+.-+.|.-.+|.++|.+++ ..+++++++|+++...|.+++|+..|.+|++ ..|..+.++.|+|.
T Consensus 318 ~F~~Ay~NlanALkd~G~V~ea~~cYnkaL~l~p~hadam~NLgni~~E~~~~e~A~~ly~~al~-v~p~~aaa~nNLa~ 396 (966)
T KOG4626|consen 318 NFPDAYNNLANALKDKGSVTEAVDCYNKALRLCPNHADAMNNLGNIYREQGKIEEATRLYLKALE-VFPEFAAAHNNLAS 396 (966)
T ss_pred CchHHHhHHHHHHHhccchHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhccchHHHHHHHHHHh-hChhhhhhhhhHHH
Confidence 466778888888888888889999999988 7888999999999999999999999999999 99999999999999
Q ss_pred HHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccC
Q 010932 433 SYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 433 ~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
+|.++|++++|+..|+.||+++|.++++|.++|..|..+|+.+.|+.+|.+|+.++|...+|
T Consensus 397 i~kqqgnl~~Ai~~YkealrI~P~fAda~~NmGnt~ke~g~v~~A~q~y~rAI~~nPt~AeA 458 (966)
T KOG4626|consen 397 IYKQQGNLDDAIMCYKEALRIKPTFADALSNMGNTYKEMGDVSAAIQCYTRAIQINPTFAEA 458 (966)
T ss_pred HHHhcccHHHHHHHHHHHHhcCchHHHHHHhcchHHHHhhhHHHHHHHHHHHHhcCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999887665
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.1e-16 Score=143.23 Aligned_cols=130 Identities=18% Similarity=0.141 Sum_probs=100.6
Q ss_pred CCCCcEEEEEEEcCCcEEEEEEccCCCC-------------CChhHHHHHHHHhccCCCCcc--eeeeeeeeeCC----c
Q 010932 72 DKAPNVVYRGRLKNNRLVAIKRFSRQSW-------------PDPHQFVTEAAGLGNVRHKRL--VNLIGCCAEGD----E 132 (497)
Q Consensus 72 ~G~~g~V~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~ni--v~~~~~~~~~~----~ 132 (497)
.|+.|+||.+... +..++||.+..... .....+.+|+.++..++|++| +..+++..... .
T Consensus 42 ~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~ 120 (239)
T PRK01723 42 AKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYR 120 (239)
T ss_pred CCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCccee
Confidence 5666778888874 77899998853211 123468899999999998875 66776644322 2
Q ss_pred eEEEEEcCCC-CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccc
Q 010932 133 RLLVAQYMPN-DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN 210 (497)
Q Consensus 133 ~~lv~e~~~~-~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 210 (497)
.++|||+++| .+|.+++.. ..++.. .+.+|+.+|.+||..| |+|+||||.|||++.++.++|+|||.+..
T Consensus 121 ~~lV~e~l~G~~~L~~~l~~---~~l~~~----~~~~i~~~l~~lH~~G-I~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 121 ADILIERIEGARDLVALLQE---APLSEE----QWQAIGQLIARFHDAG-VYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred eeEEEEecCCCCCHHHHHhc---CCCCHH----HHHHHHHHHHHHHHCC-CCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 3599999997 689888743 345543 3678999999999999 99999999999999999999999998874
|
|
| >PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.9e-15 Score=126.45 Aligned_cols=101 Identities=14% Similarity=-0.011 Sum_probs=98.1
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQAL 466 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 466 (497)
+..+.+|..|..++..|++++|...|+.++. ++|.++..|+|+|.|+..+|+|++||..|.+|+.++|+++.++++.|.
T Consensus 33 ~~l~~lY~~A~~ly~~G~l~~A~~~f~~L~~-~Dp~~~~y~~gLG~~~Q~~g~~~~AI~aY~~A~~L~~ddp~~~~~ag~ 111 (157)
T PRK15363 33 QPLNTLYRYAMQLMEVKEFAGAARLFQLLTI-YDAWSFDYWFRLGECCQAQKHWGEAIYAYGRAAQIKIDAPQAPWAAAE 111 (157)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-hCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHH
Confidence 6777899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhcCc
Q 010932 467 ALNKLGMETDAQDMLNDGASFE 488 (497)
Q Consensus 467 ~~~~~~~~~~A~~~~~~a~~l~ 488 (497)
+|+.+|+.+.|.++|+.|+..-
T Consensus 112 c~L~lG~~~~A~~aF~~Ai~~~ 133 (157)
T PRK15363 112 CYLACDNVCYAIKALKAVVRIC 133 (157)
T ss_pred HHHHcCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999765
|
|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.4e-15 Score=143.68 Aligned_cols=98 Identities=14% Similarity=0.165 Sum_probs=49.3
Q ss_pred HHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHH
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYL 435 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~ 435 (497)
..++.+|..+...|.+++|+..|++++ +++.+++.+|..+...|+|++|+..|++|++ ++|++..+|+++|.+++
T Consensus 65 ~~~~~~g~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~-l~P~~~~a~~~lg~~l~ 143 (296)
T PRK11189 65 QLHYERGVLYDSLGLRALARNDFSQALALRPDMADAYNYLGIYLTQAGNFDAAYEAFDSVLE-LDPTYNYAYLNRGIALY 143 (296)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHH
Confidence 444445555555555555555555444 3444455555555555555555555555555 55555555555555555
Q ss_pred hhhcHHHHHHHHHHHHHhCCCCh
Q 010932 436 MIEQAELALRDAMQAQVCLPEWP 458 (497)
Q Consensus 436 ~~~~~~~A~~~~~~al~l~p~~~ 458 (497)
..|++++|+.+|+++++++|+++
T Consensus 144 ~~g~~~eA~~~~~~al~~~P~~~ 166 (296)
T PRK11189 144 YGGRYELAQDDLLAFYQDDPNDP 166 (296)
T ss_pred HCCCHHHHHHHHHHHHHhCCCCH
Confidence 55555555555555555555543
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=9.5e-15 Score=131.40 Aligned_cols=120 Identities=13% Similarity=0.085 Sum_probs=111.7
Q ss_pred ccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH-Hhhhc--HHHHH
Q 010932 372 GAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY-LMIEQ--AELAL 444 (497)
Q Consensus 372 ~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~-~~~~~--~~~A~ 444 (497)
.++.++++..+++++ ++++.|+.+|..+...|++++|+..|++|++ ++|+++.+++++|.++ ...|+ +++|+
T Consensus 52 ~~~~~~~i~~l~~~L~~~P~~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~-l~P~~~~~~~~lA~aL~~~~g~~~~~~A~ 130 (198)
T PRK10370 52 QQTPEAQLQALQDKIRANPQNSEQWALLGEYYLWRNDYDNALLAYRQALQ-LRGENAELYAALATVLYYQAGQHMTPQTR 130 (198)
T ss_pred chhHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHhcCCCCcHHHH
Confidence 455678888888888 7899999999999999999999999999999 9999999999999985 67788 59999
Q ss_pred HHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccc
Q 010932 445 RDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQ 492 (497)
Q Consensus 445 ~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~ 492 (497)
..++++++++|+++.+++.+|.+++++|+|++|+.+|+++++++|.+.
T Consensus 131 ~~l~~al~~dP~~~~al~~LA~~~~~~g~~~~Ai~~~~~aL~l~~~~~ 178 (198)
T PRK10370 131 EMIDKALALDANEVTALMLLASDAFMQADYAQAIELWQKVLDLNSPRV 178 (198)
T ss_pred HHHHHHHHhCCCChhHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 999999999999999999999999999999999999999999988754
|
|
| >KOG0553 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.5e-15 Score=134.44 Aligned_cols=132 Identities=14% Similarity=0.133 Sum_probs=121.6
Q ss_pred hhHHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHH
Q 010932 355 LTAVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRR 430 (497)
Q Consensus 355 ~~~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~ 430 (497)
-...++.+...|....+.++|++|+..|++|| +++..|.++|-+|.++|.|+.|+++...||. +||.+..+|..+
T Consensus 77 ~~~~AE~LK~eGN~~m~~~~Y~eAv~kY~~AI~l~P~nAVyycNRAAAy~~Lg~~~~AVkDce~Al~-iDp~yskay~RL 155 (304)
T KOG0553|consen 77 DKALAESLKNEGNKLMKNKDYQEAVDKYTEAIELDPTNAVYYCNRAAAYSKLGEYEDAVKDCESALS-IDPHYSKAYGRL 155 (304)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHhcchHHHHHHHHHHHh-cChHHHHHHHHH
Confidence 34678999999999999999999999999999 7999999999999999999999999999999 999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChH---HHHHHHHHhhcC
Q 010932 431 ALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMET---DAQDMLNDGASF 487 (497)
Q Consensus 431 g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~---~A~~~~~~a~~l 487 (497)
|++|+.+|+|++|++.|++||+|+|+|...+-+|..+-.++++.+ .+...++-+..+
T Consensus 156 G~A~~~~gk~~~A~~aykKaLeldP~Ne~~K~nL~~Ae~~l~e~~~~~~~~~~~d~~~~i 215 (304)
T KOG0553|consen 156 GLAYLALGKYEEAIEAYKKALELDPDNESYKSNLKIAEQKLNEPKSSAQASGSFDMAGLI 215 (304)
T ss_pred HHHHHccCcHHHHHHHHHhhhccCCCcHHHHHHHHHHHHHhcCCCcccccccchhhhhhc
Confidence 999999999999999999999999999999999999999998877 555555554444
|
|
| >KOG4234 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.59 E-value=1e-14 Score=124.20 Aligned_cols=113 Identities=18% Similarity=0.245 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc-----HHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCC
Q 010932 381 EWTQQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS-----GTVFVRRALSYLMIEQAELALRDAMQAQVCLP 455 (497)
Q Consensus 381 ~~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~-----~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p 455 (497)
.-++++..+..+...|+.+|..|+|++|...|+.||+ +-|.- +.+|.|||.|+++++.++.||.+|.+||+|+|
T Consensus 87 ek~k~~~kad~lK~EGN~~F~ngdyeeA~skY~~Ale-~cp~~~~e~rsIly~Nraaa~iKl~k~e~aI~dcsKaiel~p 165 (271)
T KOG4234|consen 87 EKDKAIEKADSLKKEGNELFKNGDYEEANSKYQEALE-SCPSTSTEERSILYSNRAAALIKLRKWESAIEDCSKAIELNP 165 (271)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHH-hCccccHHHHHHHHhhhHHHHHHhhhHHHHHHHHHhhHhcCc
Confidence 3455678889999999999999999999999999999 77764 46899999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccC
Q 010932 456 EWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 456 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
.+-+|+.+++.+|.++.+|++|+++|++.++++|.+..+
T Consensus 166 ty~kAl~RRAeayek~ek~eealeDyKki~E~dPs~~ea 204 (271)
T KOG4234|consen 166 TYEKALERRAEAYEKMEKYEEALEDYKKILESDPSRREA 204 (271)
T ss_pred hhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCcchHHH
Confidence 999999999999999999999999999999999987643
|
|
| >PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=7e-15 Score=144.71 Aligned_cols=104 Identities=22% Similarity=0.280 Sum_probs=99.8
Q ss_pred HHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Q 010932 390 LNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALN 469 (497)
Q Consensus 390 ~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 469 (497)
..+...|..++..|+|++|+..|++||+ ++|+++.+|+++|.+|..+|++++|+.++++|++++|+++.+|+++|.+|+
T Consensus 3 ~~l~~~a~~a~~~~~~~~Ai~~~~~Al~-~~P~~~~a~~~~a~~~~~~g~~~eAl~~~~~Al~l~P~~~~a~~~lg~~~~ 81 (356)
T PLN03088 3 KDLEDKAKEAFVDDDFALAVDLYTQAID-LDPNNAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACM 81 (356)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 3577899999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HCCChHHHHHHHHHhhcCccccccC
Q 010932 470 KLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 470 ~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
.+|+|++|+.+|++|++++|++...
T Consensus 82 ~lg~~~eA~~~~~~al~l~P~~~~~ 106 (356)
T PLN03088 82 KLEEYQTAKAALEKGASLAPGDSRF 106 (356)
T ss_pred HhCCHHHHHHHHHHHHHhCCCCHHH
Confidence 9999999999999999999987654
|
|
| >TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.3e-14 Score=121.41 Aligned_cols=108 Identities=14% Similarity=0.172 Sum_probs=103.8
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQAL 466 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 466 (497)
+++...+..|..++..|++++|+..|++++. ++|+++.+|+++|.++..+|++++|+..++++++++|+++..++.+|.
T Consensus 15 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~-~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~ 93 (135)
T TIGR02552 15 EQLEQIYALAYNLYQQGRYDEALKLFQLLAA-YDPYNSRYWLGLAACCQMLKEYEEAIDAYALAAALDPDDPRPYFHAAE 93 (135)
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHH-hCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Confidence 5677889999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 467 ALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 467 ~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
++..+|++++|+..|+++++++|++...|
T Consensus 94 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 122 (135)
T TIGR02552 94 CLLALGEPESALKALDLAIEICGENPEYS 122 (135)
T ss_pred HHHHcCCHHHHHHHHHHHHHhccccchHH
Confidence 99999999999999999999999987654
|
ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array. |
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.8e-15 Score=148.93 Aligned_cols=134 Identities=11% Similarity=0.115 Sum_probs=114.6
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
++.|...|.++.-+++.+.|+++|.+|+ ..+.+|--.|-.+....+|+.|..+|++||. .+|.++.|||.+|.+|
T Consensus 421 PesWca~GNcfSLQkdh~~Aik~f~RAiQldp~faYayTLlGhE~~~~ee~d~a~~~fr~Al~-~~~rhYnAwYGlG~vy 499 (638)
T KOG1126|consen 421 PESWCALGNCFSLQKDHDTAIKCFKRAIQLDPRFAYAYTLLGHESIATEEFDKAMKSFRKALG-VDPRHYNAWYGLGTVY 499 (638)
T ss_pred cHHHHHhcchhhhhhHHHHHHHHHHHhhccCCccchhhhhcCChhhhhHHHHhHHHHHHhhhc-CCchhhHHHHhhhhhe
Confidence 4667778888888888888888888888 4667777888888888888888888888888 8888888888888888
Q ss_pred HhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccccc
Q 010932 435 LMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQN 493 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~ 493 (497)
.++++++.|.-.|++|++++|.+.......|.++.++|+.++|+..|++|+.+||+++-
T Consensus 500 ~Kqek~e~Ae~~fqkA~~INP~nsvi~~~~g~~~~~~k~~d~AL~~~~~A~~ld~kn~l 558 (638)
T KOG1126|consen 500 LKQEKLEFAEFHFQKAVEINPSNSVILCHIGRIQHQLKRKDKALQLYEKAIHLDPKNPL 558 (638)
T ss_pred eccchhhHHHHHHHhhhcCCccchhHHhhhhHHHHHhhhhhHHHHHHHHHHhcCCCCch
Confidence 88888888888888888888888888888888888888888888888888888888753
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.3e-14 Score=123.86 Aligned_cols=110 Identities=11% Similarity=0.082 Sum_probs=104.7
Q ss_pred HHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhh
Q 010932 362 LLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMI 437 (497)
Q Consensus 362 ~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~ 437 (497)
+...|..+...|.+++|+..|++++ .++.+++.+|.++...|++++|+..|++|++ ++|+++.+|+++|.|+..+
T Consensus 27 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~-l~p~~~~a~~~lg~~l~~~ 105 (144)
T PRK15359 27 VYASGYASWQEGDYSRAVIDFSWLVMAQPWSWRAHIALAGTWMMLKEYTTAINFYGHALM-LDASHPEPVYQTGVCLKMM 105 (144)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-cCCCCcHHHHHHHHHHHHc
Confidence 5567889999999999999999988 7899999999999999999999999999999 9999999999999999999
Q ss_pred hcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCC
Q 010932 438 EQAELALRDAMQAQVCLPEWPTAFYMQALALNKLG 472 (497)
Q Consensus 438 ~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~ 472 (497)
|++++|+..|++|++++|+++.+|.++|.++..++
T Consensus 106 g~~~eAi~~~~~Al~~~p~~~~~~~~~~~~~~~l~ 140 (144)
T PRK15359 106 GEPGLAREAFQTAIKMSYADASWSEIRQNAQIMVD 140 (144)
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999887654
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.57 E-value=7.6e-15 Score=142.57 Aligned_cols=103 Identities=23% Similarity=0.407 Sum_probs=99.4
Q ss_pred HHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Q 010932 389 MLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALAL 468 (497)
Q Consensus 389 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 468 (497)
+..+..+|+.++..|+|+.|+.+|+.||. ++|.|...|.||+.||..+|+|++|+.|..++++++|+|+++|.++|.++
T Consensus 2 a~e~k~kgnaa~s~~d~~~ai~~~t~ai~-l~p~nhvlySnrsaa~a~~~~~~~al~da~k~~~l~p~w~kgy~r~Gaa~ 80 (539)
T KOG0548|consen 2 AVELKEKGNAAFSSGDFETAIRLFTEAIM-LSPTNHVLYSNRSAAYASLGSYEKALKDATKTRRLNPDWAKGYSRKGAAL 80 (539)
T ss_pred hhHHHHHHHhhcccccHHHHHHHHHHHHc-cCCCccchhcchHHHHHHHhhHHHHHHHHHHHHhcCCchhhHHHHhHHHH
Confidence 34577899999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred HHCCChHHHHHHHHHhhcCccccc
Q 010932 469 NKLGMETDAQDMLNDGASFEAKKQ 492 (497)
Q Consensus 469 ~~~~~~~~A~~~~~~a~~l~~~~~ 492 (497)
..+|+|++|+..|.++|+.+|.+.
T Consensus 81 ~~lg~~~eA~~ay~~GL~~d~~n~ 104 (539)
T KOG0548|consen 81 FGLGDYEEAILAYSEGLEKDPSNK 104 (539)
T ss_pred HhcccHHHHHHHHHHHhhcCCchH
Confidence 999999999999999999999864
|
|
| >KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.57 E-value=8.7e-15 Score=137.57 Aligned_cols=133 Identities=16% Similarity=0.214 Sum_probs=123.7
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHH----------------HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCC
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQV----------------QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMS 420 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----------------~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~ 420 (497)
.-.+++.-+|.++.-.++.+.++..|++++ +..+.+..+|+.+|+.|+|..|.++|+.||. ++
T Consensus 201 ~n~~al~vrg~~~yy~~~~~ka~~hf~qal~ldpdh~~sk~~~~~~k~le~~k~~gN~~fk~G~y~~A~E~Yteal~-id 279 (486)
T KOG0550|consen 201 TNAEALYVRGLCLYYNDNADKAINHFQQALRLDPDHQKSKSASMMPKKLEVKKERGNDAFKNGNYRKAYECYTEALN-ID 279 (486)
T ss_pred chhHHHHhcccccccccchHHHHHHHhhhhccChhhhhHHhHhhhHHHHHHHHhhhhhHhhccchhHHHHHHHHhhc-CC
Confidence 345777888999999999999999999988 4567788999999999999999999999999 99
Q ss_pred CCc----HHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccc
Q 010932 421 VPS----GTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAK 490 (497)
Q Consensus 421 p~~----~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~ 490 (497)
|++ +.+|.|||.++.++|+..+||.+|+.|++|||.+.+||.++|.|+..+++|++|+++|++|++++..
T Consensus 280 P~n~~~naklY~nra~v~~rLgrl~eaisdc~~Al~iD~syikall~ra~c~l~le~~e~AV~d~~~a~q~~~s 353 (486)
T KOG0550|consen 280 PSNKKTNAKLYGNRALVNIRLGRLREAISDCNEALKIDSSYIKALLRRANCHLALEKWEEAVEDYEKAMQLEKD 353 (486)
T ss_pred ccccchhHHHHHHhHhhhcccCCchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 997 6789999999999999999999999999999999999999999999999999999999999988755
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.5e-14 Score=153.99 Aligned_cols=133 Identities=11% Similarity=0.035 Sum_probs=72.0
Q ss_pred HHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHH
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYL 435 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~ 435 (497)
..+..+|..+...|++++|+..|++++ .....+..+|.++...|++++|+..|+++++ ++|+++.+|+++|.+++
T Consensus 332 ~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~la~~~~~~g~~~eA~~~~~~al~-~~p~~~~~~~~lg~~~~ 410 (615)
T TIGR00990 332 IALNLRGTFKCLKGKHLEALADLSKSIELDPRVTQSYIKRASMNLELGDPDKAEEDFDKALK-LNSEDPDIYYHRAQLHF 410 (615)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHH
Confidence 344455555555555555555555555 2344455555555555555555555555555 55555555555555555
Q ss_pred hhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccccc
Q 010932 436 MIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQN 493 (497)
Q Consensus 436 ~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~ 493 (497)
.+|++++|+.+|+++++++|++..+|+++|.++.++|++++|+..|++++++.|+.+.
T Consensus 411 ~~g~~~~A~~~~~kal~l~P~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~P~~~~ 468 (615)
T TIGR00990 411 IKGEFAQAGKDYQKSIDLDPDFIFSHIQLGVTQYKEGSIASSMATFRRCKKNFPEAPD 468 (615)
T ss_pred HcCCHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChH
Confidence 5555555555555555555555555555555555555555555555555555554443
|
|
| >KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown] | Back alignment and domain information |
|---|
Probab=99.57 E-value=7.4e-15 Score=134.75 Aligned_cols=106 Identities=21% Similarity=0.260 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHH
Q 010932 386 VQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQA 465 (497)
Q Consensus 386 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 465 (497)
+..+..+..+|+.||++|+|++||+||+++|. ++|.|+..+.||+.+|+++.+|..|..||+.|+.||-.+.+||.++|
T Consensus 94 L~~~SEiKE~GN~yFKQgKy~EAIDCYs~~ia-~~P~NpV~~~NRA~AYlk~K~FA~AE~DC~~AiaLd~~Y~KAYSRR~ 172 (536)
T KOG4648|consen 94 LKKASEIKERGNTYFKQGKYEEAIDCYSTAIA-VYPHNPVYHINRALAYLKQKSFAQAEEDCEAAIALDKLYVKAYSRRM 172 (536)
T ss_pred HHhhHHHHHhhhhhhhccchhHHHHHhhhhhc-cCCCCccchhhHHHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHHH
Confidence 46666789999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCChHHHHHHHHHhhcCccccc
Q 010932 466 LALNKLGMETDAQDMLNDGASFEAKKQ 492 (497)
Q Consensus 466 ~~~~~~~~~~~A~~~~~~a~~l~~~~~ 492 (497)
.+...+|+..+|.++++.+|+|+|+..
T Consensus 173 ~AR~~Lg~~~EAKkD~E~vL~LEP~~~ 199 (536)
T KOG4648|consen 173 QARESLGNNMEAKKDCETVLALEPKNI 199 (536)
T ss_pred HHHHHHhhHHHHHHhHHHHHhhCcccH
Confidence 999999999999999999999999854
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.5e-14 Score=152.35 Aligned_cols=136 Identities=11% Similarity=0.108 Sum_probs=128.2
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHH
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALS 433 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~ 433 (497)
....+..+|..+...|++++|+..|++++ +++..++.+|..++..|+|++|+.+|+++++ ++|++..+|+++|.+
T Consensus 364 ~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~kal~-l~P~~~~~~~~la~~ 442 (615)
T TIGR00990 364 VTQSYIKRASMNLELGDPDKAEEDFDKALKLNSEDPDIYYHRAQLHFIKGEFAQAGKDYQKSID-LDPDFIFSHIQLGVT 442 (615)
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-cCccCHHHHHHHHHH
Confidence 34567888899999999999999999988 5689999999999999999999999999999 999999999999999
Q ss_pred HHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccC
Q 010932 434 YLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 434 ~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
+.++|++++|+..|++++++.|+++.+|+.+|.++..+|++++|+++|++|++++|+....
T Consensus 443 ~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~p~~~~~ 503 (615)
T TIGR00990 443 QYKEGSIASSMATFRRCKKNFPEAPDVYNYYGELLLDQNKFDEAIEKFDTAIELEKETKPM 503 (615)
T ss_pred HHHCCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCccccc
Confidence 9999999999999999999999999999999999999999999999999999999875443
|
|
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.5e-14 Score=135.24 Aligned_cols=144 Identities=6% Similarity=-0.033 Sum_probs=130.3
Q ss_pred ccchhHHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcc-cHHHHHHHHHHHhhcCCCCcHHH
Q 010932 352 RMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDK-DFKNAIEYYSKLVSMMSVPSGTV 426 (497)
Q Consensus 352 ~~~~~~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~-~~~~Ai~~~~~ai~~~~p~~~~~ 426 (497)
-...+++.+++...-..+...+.+++|+..++++| ++..+|..+|.++..+| ++++|+..++++++ .+|+++.+
T Consensus 30 i~y~~~~~~a~~~~ra~l~~~e~serAL~lt~~aI~lnP~~ytaW~~R~~iL~~L~~~l~eeL~~~~~~i~-~npknyqa 108 (320)
T PLN02789 30 IAYTPEFREAMDYFRAVYASDERSPRALDLTADVIRLNPGNYTVWHFRRLCLEALDADLEEELDFAEDVAE-DNPKNYQI 108 (320)
T ss_pred eeeCHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHcchhHHHHHHHHHHHHH-HCCcchHH
Confidence 33445666666555555677788999999999999 68899999999999999 68999999999999 99999999
Q ss_pred HHHHHHHHHhhhcH--HHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCCC
Q 010932 427 FVRRALSYLMIEQA--ELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSWR 496 (497)
Q Consensus 427 ~~~~g~~~~~~~~~--~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~~ 496 (497)
|++|+.++.++|+. +++++.++++++++|++..||+++|.++..+|+|++|++++.+++++|+.+..+|+
T Consensus 109 W~~R~~~l~~l~~~~~~~el~~~~kal~~dpkNy~AW~~R~w~l~~l~~~~eeL~~~~~~I~~d~~N~sAW~ 180 (320)
T PLN02789 109 WHHRRWLAEKLGPDAANKELEFTRKILSLDAKNYHAWSHRQWVLRTLGGWEDELEYCHQLLEEDVRNNSAWN 180 (320)
T ss_pred hHHHHHHHHHcCchhhHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCchhHHH
Confidence 99999999999974 78999999999999999999999999999999999999999999999999999996
|
|
| >KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.3e-14 Score=134.75 Aligned_cols=110 Identities=21% Similarity=0.280 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc--------------HHHHHHHHHHHHhhhcHHHHHHHHHH
Q 010932 384 QQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS--------------GTVFVRRALSYLMIEQAELALRDAMQ 449 (497)
Q Consensus 384 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~--------------~~~~~~~g~~~~~~~~~~~A~~~~~~ 449 (497)
..+..+......|+.+|+.|+|..|+..|++|+..++-.+ ..++.|++.|+.++++|.+|+..|++
T Consensus 203 e~l~~A~~~ke~Gn~~fK~gk~~~A~~~Yerav~~l~~~~~~~~ee~~~~~~~k~~~~lNlA~c~lKl~~~~~Ai~~c~k 282 (397)
T KOG0543|consen 203 ERLEAADRKKERGNVLFKEGKFKLAKKRYERAVSFLEYRRSFDEEEQKKAEALKLACHLNLAACYLKLKEYKEAIESCNK 282 (397)
T ss_pred HHHHHHHHHHHhhhHHHhhchHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHHHhhHHHHHHHhhhhHHHHHHHHHH
Confidence 3567888889999999999999999999999998544221 35899999999999999999999999
Q ss_pred HHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccccc
Q 010932 450 AQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQN 493 (497)
Q Consensus 450 al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~ 493 (497)
+|+++|+|.+|+|++|.|+..+|+|+.|+.+|++|++++|.+..
T Consensus 283 vLe~~~~N~KALyRrG~A~l~~~e~~~A~~df~ka~k~~P~Nka 326 (397)
T KOG0543|consen 283 VLELDPNNVKALYRRGQALLALGEYDLARDDFQKALKLEPSNKA 326 (397)
T ss_pred HHhcCCCchhHHHHHHHHHHhhccHHHHHHHHHHHHHhCCCcHH
Confidence 99999999999999999999999999999999999999999854
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.4e-14 Score=142.30 Aligned_cols=241 Identities=19% Similarity=0.234 Sum_probs=180.5
Q ss_pred cccccCCC--CCCcEEEEEEE--c-CCcEEEEEEccC--CCCCChhHHHHHHHHhccCC-CCcceeeeeeeeeCCceEEE
Q 010932 65 LIVSESGD--KAPNVVYRGRL--K-NNRLVAIKRFSR--QSWPDPHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 65 ~~~~~lg~--G~~g~V~~~~~--~-~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv 136 (497)
.+.+.+|. |.+|.||.+.. + ++..+|+|.=+. ........=.+|+....+++ |+|.++.+..+...+..++-
T Consensus 117 ~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiq 196 (524)
T KOG0601|consen 117 PISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQ 196 (524)
T ss_pred ccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceee
Confidence 44566799 99999999987 3 488999998332 22223334456676666664 99999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHH----HHHHHHcCCCcccccCCCcceEeCCC-CCeeEcccCCcccc
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ----ALDHCNSQNRKLYHDLNAYRVLFDED-GDPRLSSFGLMKNS 211 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~----~L~~lh~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~ 211 (497)
+|++ +.+|..+.+. ....++....+.+..+... ||.++|+.+ ++|-|+||.||+...+ ...+++|||+...+
T Consensus 197 tE~~-~~sl~~~~~~-~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~-~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i 273 (524)
T KOG0601|consen 197 TELC-GESLQSYCHT-PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNN-IVHDDLKPANIFTTSDWTSCKLTDFGLVSKI 273 (524)
T ss_pred eccc-cchhHHhhhc-ccccCCchhhhhHHhhhhhcccccccccCCCc-ccccccchhheecccccceeecCCcceeEEc
Confidence 9998 5778777654 2445888888888888888 999999999 9999999999999988 88999999998866
Q ss_pred CCCC---------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCC
Q 010932 212 RDGK---------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282 (497)
Q Consensus 212 ~~~~---------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (497)
.... ...|...|++||... +.++...|||++|.+..+..++..++.......+...+-. .+..++
T Consensus 274 ~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~-----~ip~e~ 347 (524)
T KOG0601|consen 274 SDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG-----YIPLEF 347 (524)
T ss_pred cCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc-----cCchhh
Confidence 5543 114567799999886 7788999999999999999999876643311111111111 012223
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 283 ANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 283 ~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
....+..+...+..+++.+|-.|++.+.+..+
T Consensus 348 ~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 348 CEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred hcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 33344556679999999999999998877653
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.53 E-value=2e-14 Score=145.05 Aligned_cols=139 Identities=20% Similarity=0.175 Sum_probs=97.6
Q ss_pred ccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCC--------------------------h--------------hHHHH
Q 010932 68 SESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD--------------------------P--------------HQFVT 107 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------------------~--------------~~~~~ 107 (497)
..+|.|++|.||+|++++|+.||||+.++..... . -.|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 3579999999999999999999999986542110 0 02445
Q ss_pred HHHHhccCC----CCcceeeeeeee-eCCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHH-HHHHHHcCCC
Q 010932 108 EAAGLGNVR----HKRLVNLIGCCA-EGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ-ALDHCNSQNR 181 (497)
Q Consensus 108 e~~~l~~l~----h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~-~L~~lh~~~~ 181 (497)
|...+.+++ |.+-+.+-.++. .....+|||||++|++|.++.... ....+ ...++..++. .+..+|..|
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~-~~~~~---~~~ia~~~~~~~l~ql~~~g- 277 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALD-EAGLD---RKALAENLARSFLNQVLRDG- 277 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHH-hcCCC---HHHHHHHHHHHHHHHHHhCC-
Confidence 555555552 222233333332 234569999999999998876431 11222 3456666665 467889998
Q ss_pred cccccCCCcceEeCCCCCeeEcccCCcccc
Q 010932 182 KLYHDLNAYRVLFDEDGDPRLSSFGLMKNS 211 (497)
Q Consensus 182 iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 211 (497)
++|+|+||.||+++.++.++++|||++...
T Consensus 278 ~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 278 FFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred ceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 999999999999999999999999997643
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.51 E-value=8.2e-14 Score=133.59 Aligned_cols=96 Identities=23% Similarity=0.330 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHH
Q 010932 386 VQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQA 465 (497)
Q Consensus 386 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 465 (497)
++.+.++.++||.+|+.|+|++||++|++||+ +.|+.+..|.||+.||..+|++++-++++.+||+++|++.+|+++|+
T Consensus 112 ~k~A~~lK~~GN~~f~~kkY~eAIkyY~~AI~-l~p~epiFYsNraAcY~~lgd~~~Vied~TkALEl~P~Y~KAl~RRA 190 (606)
T KOG0547|consen 112 LKYAAALKTKGNKFFRNKKYDEAIKYYTQAIE-LCPDEPIFYSNRAACYESLGDWEKVIEDCTKALELNPDYVKALLRRA 190 (606)
T ss_pred HHHHHHHHhhhhhhhhcccHHHHHHHHHHHHh-cCCCCchhhhhHHHHHHHHhhHHHHHHHHHHHhhcCcHHHHHHHHHH
Confidence 47788999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCChHHHHHHHH
Q 010932 466 LALNKLGMETDAQDMLN 482 (497)
Q Consensus 466 ~~~~~~~~~~~A~~~~~ 482 (497)
.++..+|++++|+.+..
T Consensus 191 ~A~E~lg~~~eal~D~t 207 (606)
T KOG0547|consen 191 SAHEQLGKFDEALFDVT 207 (606)
T ss_pred HHHHhhccHHHHHHhhh
Confidence 99999999999998765
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.8e-13 Score=118.65 Aligned_cols=140 Identities=14% Similarity=0.043 Sum_probs=130.1
Q ss_pred cchhHHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHH
Q 010932 353 MDLTAVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFV 428 (497)
Q Consensus 353 ~~~~~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~ 428 (497)
.+..+...+..++|..|.++|++..|.+.+++++ +...+|.-+|..|.+.|+.+.|-+.|++|+. ++|++.+++.
T Consensus 29 ~~~~~aa~arlqLal~YL~~gd~~~A~~nlekAL~~DPs~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAls-l~p~~GdVLN 107 (250)
T COG3063 29 TDRNEAAKARLQLALGYLQQGDYAQAKKNLEKALEHDPSYYLAHLVRAHYYQKLGENDLADESYRKALS-LAPNNGDVLN 107 (250)
T ss_pred ccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChhhHHHHHHHHHh-cCCCccchhh
Confidence 4455778889999999999999999999999999 6788899999999999999999999999999 9999999999
Q ss_pred HHHHHHHhhhcHHHHHHHHHHHHHh--CCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccccc
Q 010932 429 RRALSYLMIEQAELALRDAMQAQVC--LPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQN 493 (497)
Q Consensus 429 ~~g~~~~~~~~~~~A~~~~~~al~l--~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~ 493 (497)
|.|-=++.+|+|++|...|++|+.. .|.-++.|-|+|.|-++.|+.+.|.++|+++++++|+++-
T Consensus 108 NYG~FLC~qg~~~eA~q~F~~Al~~P~Y~~~s~t~eN~G~Cal~~gq~~~A~~~l~raL~~dp~~~~ 174 (250)
T COG3063 108 NYGAFLCAQGRPEEAMQQFERALADPAYGEPSDTLENLGLCALKAGQFDQAEEYLKRALELDPQFPP 174 (250)
T ss_pred hhhHHHHhCCChHHHHHHHHHHHhCCCCCCcchhhhhhHHHHhhcCCchhHHHHHHHHHHhCcCCCh
Confidence 9999999999999999999999873 3445799999999999999999999999999999998764
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.49 E-value=2e-14 Score=131.87 Aligned_cols=198 Identities=18% Similarity=0.220 Sum_probs=140.7
Q ss_pred HHhccCCCCcceeeeeeeeeC-----CceEEEEEcCCCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCC-
Q 010932 110 AGLGNVRHKRLVNLIGCCAEG-----DERLLVAQYMPNDTLSKHLFHWD--KQPLPWEMRVRVAYYIAQALDHCNSQNR- 181 (497)
Q Consensus 110 ~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~lh~~~~- 181 (497)
.-|-++-|.|||+++.++.+. ....+++||+..|+|..+|++.. ...+......+|+-||+.||.|||+..+
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 344555699999999998654 34789999999999999997532 4567888889999999999999999853
Q ss_pred cccccCCCcceEeCCCCCeeEcccCCccccCC--------CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhC
Q 010932 182 KLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD--------GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSG 253 (497)
Q Consensus 182 iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg 253 (497)
++|+++...-|++..+|-+|++--........ .....+-++|.+||.=.....+..+|||+||+..++|..+
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 88999999999999999998864322111110 0112345789999988877888999999999999999888
Q ss_pred CCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010932 254 KHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l 315 (497)
..-+............+...+-. + ....=..++.+|++-.|..||++++++.|.
T Consensus 279 Eiq~tnseS~~~~ee~ia~~i~~-l-------en~lqr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 279 EIQSTNSESKVEVEENIANVIIG-L-------ENGLQRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred eeccCCCcceeehhhhhhhheee-c-------cCccccCcCcccccCCCCCCcchhhhhcCc
Confidence 74322111111111111111100 0 001123678899999999999999998863
|
|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.5e-13 Score=129.76 Aligned_cols=118 Identities=13% Similarity=-0.014 Sum_probs=109.6
Q ss_pred chhhhhhHHHHHH--------HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHH
Q 010932 374 ENELSFQEWTQQV--------QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALR 445 (497)
Q Consensus 374 ~~e~a~~~~~~~~--------~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~ 445 (497)
..|.++..+++.+ ..+..++++|..+...|++++|+..|++|++ ++|+++.+|+++|.++..+|++++|+.
T Consensus 41 ~~e~~i~~~~~~l~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~Al~-l~P~~~~a~~~lg~~~~~~g~~~~A~~ 119 (296)
T PRK11189 41 QQEVILARLNQILASRDLTDEERAQLHYERGVLYDSLGLRALARNDFSQALA-LRPDMADAYNYLGIYLTQAGNFDAAYE 119 (296)
T ss_pred HHHHHHHHHHHHHccccCCcHhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-cCCCCHHHHHHHHHHHHHCCCHHHHHH
Confidence 3455666666655 5578899999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccc
Q 010932 446 DAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQ 492 (497)
Q Consensus 446 ~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~ 492 (497)
.|++|++++|++..+|+++|.++...|++++|+++|+++++++|++.
T Consensus 120 ~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~eA~~~~~~al~~~P~~~ 166 (296)
T PRK11189 120 AFDSVLELDPTYNYAYLNRGIALYYGGRYELAQDDLLAFYQDDPNDP 166 (296)
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999999999999999999999999875
|
|
| >KOG1125 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.4e-13 Score=133.34 Aligned_cols=103 Identities=16% Similarity=0.148 Sum_probs=99.8
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQAL 466 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 466 (497)
.+++...-+|..|+..|+|+.|++||+.||. .+|+++..|..+|.++..-.+.++||.+|.+|++|.|.+..++|++|.
T Consensus 428 ~DpdvQ~~LGVLy~ls~efdraiDcf~~AL~-v~Pnd~~lWNRLGAtLAN~~~s~EAIsAY~rALqLqP~yVR~RyNlgI 506 (579)
T KOG1125|consen 428 IDPDVQSGLGVLYNLSGEFDRAVDCFEAALQ-VKPNDYLLWNRLGATLANGNRSEEAISAYNRALQLQPGYVRVRYNLGI 506 (579)
T ss_pred CChhHHhhhHHHHhcchHHHHHHHHHHHHHh-cCCchHHHHHHhhHHhcCCcccHHHHHHHHHHHhcCCCeeeeehhhhh
Confidence 4567888999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhcCccc
Q 010932 467 ALNKLGMETDAQDMLNDGASFEAK 490 (497)
Q Consensus 467 ~~~~~~~~~~A~~~~~~a~~l~~~ 490 (497)
+++.+|.|++|.+.|-.|+.+.++
T Consensus 507 S~mNlG~ykEA~~hlL~AL~mq~k 530 (579)
T KOG1125|consen 507 SCMNLGAYKEAVKHLLEALSMQRK 530 (579)
T ss_pred hhhhhhhHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999877
|
|
| >PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.8e-13 Score=146.97 Aligned_cols=126 Identities=10% Similarity=-0.014 Sum_probs=117.5
Q ss_pred cccccccchhhhhhHHHHHHH---HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHH
Q 010932 367 YKDEEGAENELSFQEWTQQVQ---DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELA 443 (497)
Q Consensus 367 ~~~~~~~~~e~a~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A 443 (497)
......|++++|+..|+++++ ++..+.+.|.++.+.|++++|+..|+++++ ++|+++.+++++|.++..+|++++|
T Consensus 584 ~~l~~~Gr~~eAl~~~~~AL~l~P~~~a~~~LA~~l~~lG~~deA~~~l~~AL~-l~Pd~~~a~~nLG~aL~~~G~~eeA 662 (987)
T PRK09782 584 AQRYIPGQPELALNDLTRSLNIAPSANAYVARATIYRQRHNVPAAVSDLRAALE-LEPNNSNYQAALGYALWDSGDIAQS 662 (987)
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHCCCHHHH
Confidence 333445999999999999982 478899999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccccc
Q 010932 444 LRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQN 493 (497)
Q Consensus 444 ~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~ 493 (497)
+..|++|++++|+++.+++++|.++..+|++++|+.+|++|++++|+...
T Consensus 663 i~~l~~AL~l~P~~~~a~~nLA~al~~lGd~~eA~~~l~~Al~l~P~~a~ 712 (987)
T PRK09782 663 REMLERAHKGLPDDPALIRQLAYVNQRLDDMAATQHYARLVIDDIDNQAL 712 (987)
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCch
Confidence 99999999999999999999999999999999999999999999997643
|
|
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.7e-13 Score=128.22 Aligned_cols=138 Identities=11% Similarity=0.001 Sum_probs=122.8
Q ss_pred HHHHHHHhcccccccc-chhhhhhHHHHHH----HHHHHHHHHHhHHhhcccH--HHHHHHHHHHhhcCCCCcHHHHHHH
Q 010932 358 VHDILLKTGYKDEEGA-ENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDF--KNAIEYYSKLVSMMSVPSGTVFVRR 430 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~-~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~--~~Ai~~~~~ai~~~~p~~~~~~~~~ 430 (497)
...+|..+|......+ .+++++..+++++ ++..+|..++.++.+.|+. ++++++++++|+ ++|+|..+|.+|
T Consensus 70 ~ytaW~~R~~iL~~L~~~l~eeL~~~~~~i~~npknyqaW~~R~~~l~~l~~~~~~~el~~~~kal~-~dpkNy~AW~~R 148 (320)
T PLN02789 70 NYTVWHFRRLCLEALDADLEEELDFAEDVAEDNPKNYQIWHHRRWLAEKLGPDAANKELEFTRKILS-LDAKNYHAWSHR 148 (320)
T ss_pred hHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHCCcchHHhHHHHHHHHHcCchhhHHHHHHHHHHHH-hCcccHHHHHHH
Confidence 3456667777777766 5789999999988 7888999999999988874 789999999999 999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHC---CCh----HHHHHHHHHhhcCccccccCCC
Q 010932 431 ALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKL---GME----TDAQDMLNDGASFEAKKQNSWR 496 (497)
Q Consensus 431 g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~---~~~----~~A~~~~~~a~~l~~~~~~~~~ 496 (497)
|.++..+|+|++|++.++++|+++|.+..||+++|.++..+ |.+ ++++++..+|+.++|++..+|+
T Consensus 149 ~w~l~~l~~~~eeL~~~~~~I~~d~~N~sAW~~R~~vl~~~~~l~~~~~~~e~el~y~~~aI~~~P~N~SaW~ 221 (320)
T PLN02789 149 QWVLRTLGGWEDELEYCHQLLEEDVRNNSAWNQRYFVITRSPLLGGLEAMRDSELKYTIDAILANPRNESPWR 221 (320)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHCCCchhHHHHHHHHHHhccccccccccHHHHHHHHHHHHHhCCCCcCHHH
Confidence 99999999999999999999999999999999999999887 334 4788888999999999999996
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.8e-13 Score=100.08 Aligned_cols=66 Identities=20% Similarity=0.188 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCC-ChHHHHHHHHHhhcCcc
Q 010932 424 GTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLG-METDAQDMLNDGASFEA 489 (497)
Q Consensus 424 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~-~~~~A~~~~~~a~~l~~ 489 (497)
+.+|+++|.+++.+|+|++|+..|++|++++|+++.+|+++|.++..+| ++++|+++|++|++++|
T Consensus 3 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 3 AEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPNNAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 4455555555555555555555555555555555555555555555555 45555555555555544
|
... |
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.8e-13 Score=100.07 Aligned_cols=67 Identities=24% Similarity=0.412 Sum_probs=65.4
Q ss_pred HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhh-cHHHHHHHHHHHHHhCC
Q 010932 388 DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIE-QAELALRDAMQAQVCLP 455 (497)
Q Consensus 388 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~-~~~~A~~~~~~al~l~p 455 (497)
++..|+.+|..++..|+|++|+.+|++||+ ++|+++.+|+++|.|+.++| ++++|+.++++|++++|
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~-~~p~~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIE-LDPNNAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHH-HSTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-cCCCCHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 578999999999999999999999999999 99999999999999999999 89999999999999998
|
... |
| >TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.2e-12 Score=120.95 Aligned_cols=136 Identities=14% Similarity=0.114 Sum_probs=90.5
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHH
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALS 433 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~ 433 (497)
....+...|..+...+++++|++.+++++ .++..+..+|..++..|++++|+..|+++++ .+|.+..+++++|.+
T Consensus 30 ~~~~~~~la~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~-~~~~~~~~~~~~~~~ 108 (234)
T TIGR02521 30 AAKIRVQLALGYLEQGDLEVAKENLDKALEHDPDDYLAYLALALYYQQLGELEKAEDSFRRALT-LNPNNGDVLNNYGTF 108 (234)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-hCCCCHHHHHHHHHH
Confidence 34556666777777777777777777766 3456666777777777777777777777777 777766666666666
Q ss_pred HHhhhcHHHHHHHHHHHHHhC--CCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccC
Q 010932 434 YLMIEQAELALRDAMQAQVCL--PEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 434 ~~~~~~~~~A~~~~~~al~l~--p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
+..+|++++|+..|+++++.. |.....++.+|.++...|++++|...|+++++.+|+...+
T Consensus 109 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~ 171 (234)
T TIGR02521 109 LCQQGKYEQAMQQFEQAIEDPLYPQPARSLENAGLCALKAGDFDKAEKYLTRALQIDPQRPES 171 (234)
T ss_pred HHHcccHHHHHHHHHHHHhccccccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCChHH
Confidence 666666666666666666543 3445566666666666666666666666666666654433
|
Members of this family are designated PilF in ref (PubMed:8973346) and PilW in ref (PubMed:15612916). This outer membrane protein is required both for pilus stability and for pilus function such as adherence to human cells. Members of this family contain copies of the TPR (tetratricopeptide repeat) domain. |
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=8.7e-13 Score=138.21 Aligned_cols=113 Identities=12% Similarity=-0.046 Sum_probs=65.7
Q ss_pred chhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHH
Q 010932 374 ENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQ 449 (497)
Q Consensus 374 ~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~ 449 (497)
.+++|...+++++ +++.++..+|.++...|++++|+..|++|++ ++|+++.+|+++|.++..+|++++|+..+++
T Consensus 319 ~~~~A~~~~~~Al~ldP~~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~-l~P~~~~a~~~lg~~l~~~G~~~eAi~~~~~ 397 (553)
T PRK12370 319 AMIKAKEHAIKATELDHNNPQALGLLGLINTIHSEYIVGSLLFKQANL-LSPISADIKYYYGWNLFMAGQLEEALQTINE 397 (553)
T ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 3455555555555 3455555555555555666666666666666 5666666666666666666666666666666
Q ss_pred HHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcC
Q 010932 450 AQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASF 487 (497)
Q Consensus 450 al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l 487 (497)
|++++|.++.+++.++.+++.+|++++|+..++++++.
T Consensus 398 Al~l~P~~~~~~~~~~~~~~~~g~~eeA~~~~~~~l~~ 435 (553)
T PRK12370 398 CLKLDPTRAAAGITKLWITYYHTGIDDAIRLGDELRSQ 435 (553)
T ss_pred HHhcCCCChhhHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 66666665555555555555555666666665555544
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.4e-13 Score=117.27 Aligned_cols=128 Identities=16% Similarity=0.072 Sum_probs=96.2
Q ss_pred cccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcce-eeeeeeeeCCceEEEEEcCCCCCh
Q 010932 67 VSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLV-NLIGCCAEGDERLLVAQYMPNDTL 145 (497)
Q Consensus 67 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~~~~~~L 145 (497)
++.++.|.++.||++... |..|++|+...... ....+.+|+.+++.+.+.+++ +++.+. ....++||||++|.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence 345688999999999875 77899999865432 223578899999988655543 444443 2345899999999887
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCC----cccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 146 SKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNR----KLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 146 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~----iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
...- .....++.+++.+|..||..+. ++|+|++|.||+++ ++.++++|||.+.
T Consensus 79 ~~~~----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 79 LTED----------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cccc----------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 5430 1123457899999999999871 39999999999999 6789999999876
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG1155 consensus Anaphase-promoting complex (APC), Cdc23 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.5e-13 Score=126.35 Aligned_cols=124 Identities=14% Similarity=0.082 Sum_probs=106.6
Q ss_pred cccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHH
Q 010932 369 DEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELAL 444 (497)
Q Consensus 369 ~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~ 444 (497)
|.-+++.|.|+..|+.++ +...+|.-.|-.|..+++...||+.|+.||+ ++|.+..|||.+|.+|--++.+.=|+
T Consensus 340 YSlr~eHEKAv~YFkRALkLNp~~~~aWTLmGHEyvEmKNt~AAi~sYRrAvd-i~p~DyRAWYGLGQaYeim~Mh~YaL 418 (559)
T KOG1155|consen 340 YSLRSEHEKAVMYFKRALKLNPKYLSAWTLMGHEYVEMKNTHAAIESYRRAVD-INPRDYRAWYGLGQAYEIMKMHFYAL 418 (559)
T ss_pred HHHHHhHHHHHHHHHHHHhcCcchhHHHHHhhHHHHHhcccHHHHHHHHHHHh-cCchhHHHHhhhhHHHHHhcchHHHH
Confidence 344566788888888888 6777888889999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccccc
Q 010932 445 RDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQN 493 (497)
Q Consensus 445 ~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~ 493 (497)
-.|++|+++.|++...|.-+|.+|.++++.++|+++|++|+.....+..
T Consensus 419 yYfqkA~~~kPnDsRlw~aLG~CY~kl~~~~eAiKCykrai~~~dte~~ 467 (559)
T KOG1155|consen 419 YYFQKALELKPNDSRLWVALGECYEKLNRLEEAIKCYKRAILLGDTEGS 467 (559)
T ss_pred HHHHHHHhcCCCchHHHHHHHHHHHHhccHHHHHHHHHHHHhccccchH
Confidence 9999999999999999999999999999999999999998887655443
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.7e-12 Score=130.50 Aligned_cols=165 Identities=16% Similarity=0.191 Sum_probs=128.9
Q ss_pred EEE-cCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCChhhhhhcCCCCCCCH
Q 010932 81 GRL-KNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPW 159 (497)
Q Consensus 81 ~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~ 159 (497)
|.. .++.+|.|.+.+.......+...+-++.|+.+|||||++++..+......|||+|-+. -|..++.. +..
T Consensus 31 ~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~-----l~~ 103 (690)
T KOG1243|consen 31 GTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE-----LGK 103 (690)
T ss_pred cceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH-----hHH
Confidence 443 3588999999887665445678889999999999999999999999999999999873 46666644 235
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCc----cccCCCCCCccccccCCCC
Q 010932 160 EMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS----YSTNLAYTPPEFLRTGRVI 235 (497)
Q Consensus 160 ~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~----~~gt~~y~aPE~~~~~~~~ 235 (497)
......+.||+.||.|||+.+.++|++|.-..|+|+..|..||++|.++........ ...-..|..|+.+....
T Consensus 104 ~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~-- 181 (690)
T KOG1243|consen 104 EEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE-- 181 (690)
T ss_pred HHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc--
Confidence 566677899999999999765599999999999999999999999998765433321 11123466666553222
Q ss_pred cccceeehhhhHHHHhhCC
Q 010932 236 PESVIYSYGTVLLDLLSGK 254 (497)
Q Consensus 236 ~~~Dv~slG~~l~elltg~ 254 (497)
-..|.|-|||+++|++.|.
T Consensus 182 ~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 182 WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred cchhhhhHHHHHHHHhCcc
Confidence 3469999999999999994
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.7e-13 Score=139.81 Aligned_cols=136 Identities=15% Similarity=0.110 Sum_probs=90.3
Q ss_pred ccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCC--------------------------C--------hh------HHH
Q 010932 68 SESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWP--------------------------D--------PH------QFV 106 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~--------------------------~--------~~------~~~ 106 (497)
..+|+|++|.||+|++++ |+.||||++++.-.. + .+ .|.
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 567999999999999987 999999999754210 0 01 244
Q ss_pred HHHHHhccCC----CCcceeeeeeeee-CCceEEEEEcCCCCChhhhhhcCCCC----CCCHHHHHHHHHHHHHHHHHHH
Q 010932 107 TEAAGLGNVR----HKRLVNLIGCCAE-GDERLLVAQYMPNDTLSKHLFHWDKQ----PLPWEMRVRVAYYIAQALDHCN 177 (497)
Q Consensus 107 ~e~~~l~~l~----h~niv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~----~l~~~~~~~i~~~i~~~L~~lh 177 (497)
+|+..+.+++ +.+.+.+-.++.+ ....+|||||++|+.+.++-.-...+ .+....+..++.|| +
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-------f 277 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-------F 277 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-------H
Confidence 4554444442 3333444344433 34568999999999998742111111 23333333344444 4
Q ss_pred cCCCcccccCCCcceEeCCCC----CeeEcccCCcccc
Q 010932 178 SQNRKLYHDLNAYRVLFDEDG----DPRLSSFGLMKNS 211 (497)
Q Consensus 178 ~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfgla~~~ 211 (497)
..| ++|+|+||.||+++.+| .+++.|||+....
T Consensus 278 ~~G-ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l 314 (537)
T PRK04750 278 RDG-FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL 314 (537)
T ss_pred hCC-eeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence 567 99999999999999888 9999999997654
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1e-12 Score=137.58 Aligned_cols=137 Identities=12% Similarity=0.021 Sum_probs=123.7
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHH
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALS 433 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~ 433 (497)
....+...|..+...|++++|+..|++++ +++.+++.+|..+...|++++|+..|++|++ ++|.++.+++.++.+
T Consensus 337 ~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~G~~~eAi~~~~~Al~-l~P~~~~~~~~~~~~ 415 (553)
T PRK12370 337 NPQALGLLGLINTIHSEYIVGSLLFKQANLLSPISADIKYYYGWNLFMAGQLEEALQTINECLK-LDPTRAAAGITKLWI 415 (553)
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHh-cCCCChhhHHHHHHH
Confidence 45566778888899999999999999988 6788999999999999999999999999999 999999888888888
Q ss_pred HHhhhcHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 434 YLMIEQAELALRDAMQAQVCL-PEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 434 ~~~~~~~~~A~~~~~~al~l~-p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
++.+|++++|+..++++++.+ |+++.+++++|.+|..+|++++|...+++.....|....+|
T Consensus 416 ~~~~g~~eeA~~~~~~~l~~~~p~~~~~~~~la~~l~~~G~~~eA~~~~~~~~~~~~~~~~~~ 478 (553)
T PRK12370 416 TYYHTGIDDAIRLGDELRSQHLQDNPILLSMQVMFLSLKGKHELARKLTKEISTQEITGLIAV 478 (553)
T ss_pred HHhccCHHHHHHHHHHHHHhccccCHHHHHHHHHHHHhCCCHHHHHHHHHHhhhccchhHHHH
Confidence 999999999999999999885 88999999999999999999999999999887777654443
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.2e-13 Score=132.38 Aligned_cols=242 Identities=16% Similarity=0.092 Sum_probs=176.6
Q ss_pred cccccccCCCCCCcEEEEEEEc--CCcEEEEEEccCCCCCChhH--HHHHHHHhccC-CCCcceeeeeeeeeCCceEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK--NNRLVAIKRFSRQSWPDPHQ--FVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~--~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 137 (497)
+...+..+|.|.|+.|+....+ ++..+++|.+.+.......+ -..|+-+...+ .|.+++..+..|....+.++-.
T Consensus 266 df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~ 345 (524)
T KOG0601|consen 266 DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPL 345 (524)
T ss_pred CcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCch
Confidence 3456778899999999998854 48899999987654433222 34566666555 4899999888888888888999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC-CCeeEcccCCccccCCCC-
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED-GDPRLSSFGLMKNSRDGK- 215 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~~~~- 215 (497)
|||.++++...+. ....+.+..++.+..|++.++.++|+.. ++|+|+||+||++..+ +..+++|||.........
T Consensus 346 e~~~~~s~~l~~~--~~~~~d~~~~~~~~~q~~~~l~~i~s~~-~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~ 422 (524)
T KOG0601|consen 346 EFCEGGSSSLRSV--TSQMLDEDPRLRLTAQILTALNVIHSKL-FVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSG 422 (524)
T ss_pred hhhcCcchhhhhH--HHHhcCcchhhhhHHHHHhccccccchh-hhcccccccceeeccchhhhhccccccccccceecc
Confidence 9999998877662 2456788889999999999999999999 9999999999999876 888999999886422221
Q ss_pred ccccCCCCC--CccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHH
Q 010932 216 SYSTNLAYT--PPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVEL 293 (497)
Q Consensus 216 ~~~gt~~y~--aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 293 (497)
....+-.++ +|.......+..+.|++|||..+.+.+++....... .....+.. ......+. ....+..+
T Consensus 423 ~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-------~~~~~i~~-~~~p~~~~-~~~~~q~~ 493 (524)
T KOG0601|consen 423 VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG-------VQSLTIRS-GDTPNLPG-LKLQLQVL 493 (524)
T ss_pred cccccccccccchhhccccccccccccccccccccccccCcccCccc-------ccceeeec-ccccCCCc-hHHhhhhh
Confidence 122223334 455555566788999999999999999998644321 11111111 11112222 33778889
Q ss_pred HHHhcccCCCCCCCHHHHHHHhh
Q 010932 294 ASKCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 294 i~~cl~~dp~~Rps~~~ll~~l~ 316 (497)
...+...++..||++.++..+..
T Consensus 494 ~kv~~~~~~~~~~l~~~l~~~~~ 516 (524)
T KOG0601|consen 494 LKVMINPDRKRRPSAVELSLHSE 516 (524)
T ss_pred hhhhcCCccccchhhhhhcccch
Confidence 99999999999999988776543
|
|
| >PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.2e-12 Score=139.73 Aligned_cols=131 Identities=14% Similarity=0.036 Sum_probs=109.8
Q ss_pred HHhccccccccchhhhhhHHHHHHH----HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhh
Q 010932 363 LKTGYKDEEGAENELSFQEWTQQVQ----DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIE 438 (497)
Q Consensus 363 ~~~g~~~~~~~~~e~a~~~~~~~~~----~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~ 438 (497)
...|..+...|+.++|.+.|+++++ ....+...+......|++++|+..|++|++ ++|+ +.+|+++|.++.++|
T Consensus 546 ~~la~all~~Gd~~eA~~~l~qAL~l~P~~~~l~~~La~~l~~~Gr~~eAl~~~~~AL~-l~P~-~~a~~~LA~~l~~lG 623 (987)
T PRK09782 546 LAAANTAQAAGNGAARDRWLQQAEQRGLGDNALYWWLHAQRYIPGQPELALNDLTRSLN-IAPS-ANAYVARATIYRQRH 623 (987)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHhCCCHHHHHHHHHHHHH-hCCC-HHHHHHHHHHHHHCC
Confidence 3444555666667777777766662 223333445555566999999999999999 9997 999999999999999
Q ss_pred cHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 439 QAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 439 ~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
++++|+..|+++++++|+++.+++++|.++..+|++++|++.|++|++++|++..+|
T Consensus 624 ~~deA~~~l~~AL~l~Pd~~~a~~nLG~aL~~~G~~eeAi~~l~~AL~l~P~~~~a~ 680 (987)
T PRK09782 624 NVPAAVSDLRAALELEPNNSNYQAALGYALWDSGDIAQSREMLERAHKGLPDDPALI 680 (987)
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999999999999999999999999999999988765
|
|
| >TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW | Back alignment and domain information |
|---|
Probab=99.37 E-value=4.5e-12 Score=117.16 Aligned_cols=134 Identities=13% Similarity=0.091 Sum_probs=119.7
Q ss_pred HHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCC--CCcHHHHHHHHHH
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMS--VPSGTVFVRRALS 433 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~--p~~~~~~~~~g~~ 433 (497)
..+...|..+...|+++.|++.|++++ .+...+...|..++..|++++|+..|.+++. .. +.....++++|.+
T Consensus 66 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~-~~~~~~~~~~~~~l~~~ 144 (234)
T TIGR02521 66 LAYLALALYYQQLGELEKAEDSFRRALTLNPNNGDVLNNYGTFLCQQGKYEQAMQQFEQAIE-DPLYPQPARSLENAGLC 144 (234)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHh-ccccccchHHHHHHHHH
Confidence 456677888888999999999999988 4567888999999999999999999999998 54 5567899999999
Q ss_pred HHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccC
Q 010932 434 YLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 434 ~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
+...|++++|+..|+++++.+|+++.+++.+|.++...|++++|...+++++++.|.....
T Consensus 145 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 205 (234)
T TIGR02521 145 ALKAGDFDKAEKYLTRALQIDPQRPESLLELAELYYLRGQYKDARAYLERYQQTYNQTAES 205 (234)
T ss_pred HHHcCCHHHHHHHHHHHHHhCcCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 9999999999999999999999999999999999999999999999999999886655443
|
Members of this family are designated PilF in ref (PubMed:8973346) and PilW in ref (PubMed:15612916). This outer membrane protein is required both for pilus stability and for pilus function such as adherence to human cells. Members of this family contain copies of the TPR (tetratricopeptide repeat) domain. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.8e-12 Score=134.08 Aligned_cols=134 Identities=15% Similarity=0.036 Sum_probs=127.2
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRAL 432 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~ 432 (497)
...+.+..+|......|.+++|...|..++ ++..+..+.|.++.+.+++++|+..+++++. .+|+++.+++.+|.
T Consensus 84 ~~~~~~~~La~i~~~~g~~~ea~~~l~~~~~~~Pd~~~a~~~~a~~L~~~~~~eeA~~~~~~~l~-~~p~~~~~~~~~a~ 162 (694)
T PRK15179 84 HTELFQVLVARALEAAHRSDEGLAVWRGIHQRFPDSSEAFILMLRGVKRQQGIEAGRAEIELYFS-GGSSSAREILLEAK 162 (694)
T ss_pred ccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHhh-cCCCCHHHHHHHHH
Confidence 446788889999999999999999999988 7899999999999999999999999999999 99999999999999
Q ss_pred HHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccc
Q 010932 433 SYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKK 491 (497)
Q Consensus 433 ~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~ 491 (497)
++.++|+|++|++.|++++..+|+++.++..+|.++..+|+.++|..+|++|+.+...-
T Consensus 163 ~l~~~g~~~~A~~~y~~~~~~~p~~~~~~~~~a~~l~~~G~~~~A~~~~~~a~~~~~~~ 221 (694)
T PRK15179 163 SWDEIGQSEQADACFERLSRQHPEFENGYVGWAQSLTRRGALWRARDVLQAGLDAIGDG 221 (694)
T ss_pred HHHHhcchHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhCcc
Confidence 99999999999999999999999999999999999999999999999999999876543
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=5.9e-12 Score=132.64 Aligned_cols=136 Identities=7% Similarity=-0.016 Sum_probs=119.4
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhh
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIE 438 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~ 438 (497)
.+.+...|-....+.+..++...-+.-++++++++.+|.+..+.|.+++|...++.+++ ++|++..++.+++.++.+++
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~La~i~~~~g~~~ea~~~l~~~~~-~~Pd~~~a~~~~a~~L~~~~ 134 (694)
T PRK15179 56 RQVLERHAAVHKPAAALPELLDYVRRYPHTELFQVLVARALEAAHRSDEGLAVWRGIHQ-RFPDSSEAFILMLRGVKRQQ 134 (694)
T ss_pred HHHHHHhhhhcchHhhHHHHHHHHHhccccHHHHHHHHHHHHHcCCcHHHHHHHHHHHh-hCCCcHHHHHHHHHHHHHhc
Confidence 34444445554445555555555555558899999999999999999999999999999 99999999999999999999
Q ss_pred cHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 439 QAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 439 ~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
++++|+..+++++..+|+++.+++.+|.++.++|+|++|.+.|+++++.+|+..++|
T Consensus 135 ~~eeA~~~~~~~l~~~p~~~~~~~~~a~~l~~~g~~~~A~~~y~~~~~~~p~~~~~~ 191 (694)
T PRK15179 135 GIEAGRAEIELYFSGGSSSAREILLEAKSWDEIGQSEQADACFERLSRQHPEFENGY 191 (694)
T ss_pred cHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHhcCCCcHHHH
Confidence 999999999999999999999999999999999999999999999999888887775
|
|
| >TIGR02795 tol_pal_ybgF tol-pal system protein YbgF | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.5e-12 Score=102.86 Aligned_cols=104 Identities=13% Similarity=0.121 Sum_probs=97.2
Q ss_pred HHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc---HHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCC---hHHHH
Q 010932 389 MLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS---GTVFVRRALSYLMIEQAELALRDAMQAQVCLPEW---PTAFY 462 (497)
Q Consensus 389 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~---~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~---~~a~~ 462 (497)
+..++..|..++..|+|++|+..|.++++ .+|++ +.+++.+|.++.+.|++++|+..|++++..+|++ +.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~ 80 (119)
T TIGR02795 2 EEAYYDAALLVLKAGDYADAIQAFQAFLK-KYPKSTYAPNAHYWLGEAYYAQGKYADAAKAFLAVVKKYPKSPKAPDALL 80 (119)
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHHH-HCCCccccHHHHHHHHHHHHhhccHHHHHHHHHHHHHHCCCCCcccHHHH
Confidence 45789999999999999999999999999 88876 6799999999999999999999999999999986 68899
Q ss_pred HHHHHHHHCCChHHHHHHHHHhhcCcccccc
Q 010932 463 MQALALNKLGMETDAQDMLNDGASFEAKKQN 493 (497)
Q Consensus 463 ~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~ 493 (497)
.+|.++..+|++++|+..|+++++..|++..
T Consensus 81 ~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~ 111 (119)
T TIGR02795 81 KLGMSLQELGDKEKAKATLQQVIKRYPGSSA 111 (119)
T ss_pred HHHHHHHHhCChHHHHHHHHHHHHHCcCChh
Confidence 9999999999999999999999999988654
|
Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction. |
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.3e-11 Score=109.55 Aligned_cols=138 Identities=16% Similarity=0.162 Sum_probs=99.5
Q ss_pred cccCCCCCCcEEEEEEEcC-------CcEEEEEEccCCCC---------------------CC-hhHHH----HHHHHhc
Q 010932 67 VSESGDKAPNVVYRGRLKN-------NRLVAIKRFSRQSW---------------------PD-PHQFV----TEAAGLG 113 (497)
Q Consensus 67 ~~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~~---------------------~~-~~~~~----~e~~~l~ 113 (497)
.+.+|.|-=+.||.|...+ +..+|||+.+.+.. .. ...+. +|+..|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3567899999999998543 47999999753210 00 12233 8999999
Q ss_pred cCCC--CcceeeeeeeeeCCceEEEEEcCCCCChhh-hhhcCCCCCCCHHHHHHHHHHHHHHHHHH-HcCCCcccccCCC
Q 010932 114 NVRH--KRLVNLIGCCAEGDERLLVAQYMPNDTLSK-HLFHWDKQPLPWEMRVRVAYYIAQALDHC-NSQNRKLYHDLNA 189 (497)
Q Consensus 114 ~l~h--~niv~~~~~~~~~~~~~lv~e~~~~~~L~~-~l~~~~~~~l~~~~~~~i~~~i~~~L~~l-h~~~~iiH~Dlkp 189 (497)
++.. -++..++++ ..-+|||||+.+..+.. .+. ...++......+..+++.+|..+ |..+ +||+||++
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk---d~~~~~~~~~~i~~~i~~~l~~l~H~~g-lVHGDLs~ 153 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK---DAKLNDEEMKNAYYQVLSMMKQLYKECN-LVHADLSE 153 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh---ccccCHHHHHHHHHHHHHHHHHHHHhCC-eecCCCCH
Confidence 9853 456666654 34589999997653322 221 22455566778889999999999 7888 99999999
Q ss_pred cceEeCCCCCeeEcccCCccccCC
Q 010932 190 YRVLFDEDGDPRLSSFGLMKNSRD 213 (497)
Q Consensus 190 ~Nill~~~~~~kl~Dfgla~~~~~ 213 (497)
.|||++ ++.+.|+|||.+.....
T Consensus 154 ~NIL~~-~~~v~iIDF~qav~~~h 176 (197)
T cd05146 154 YNMLWH-DGKVWFIDVSQSVEPTH 176 (197)
T ss_pred HHEEEE-CCcEEEEECCCceeCCC
Confidence 999997 57899999999875543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.3e-11 Score=96.49 Aligned_cols=99 Identities=23% Similarity=0.386 Sum_probs=95.1
Q ss_pred HHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Q 010932 391 NTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNK 470 (497)
Q Consensus 391 ~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 470 (497)
.++.+|..++..|++++|+..|+++++ ..|.+..+++.+|.++...+++++|+..|++++++.|.+..+++.+|.++..
T Consensus 2 ~~~~~a~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (100)
T cd00189 2 ALLNLGNLYYKLGDYDEALEYYEKALE-LDPDNADAYYNLAAAYYKLGKYEEALEDYEKALELDPDNAKAYYNLGLAYYK 80 (100)
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHh-cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHH
Confidence 578899999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhhcCccc
Q 010932 471 LGMETDAQDMLNDGASFEAK 490 (497)
Q Consensus 471 ~~~~~~A~~~~~~a~~l~~~ 490 (497)
+|++++|...++++++++|+
T Consensus 81 ~~~~~~a~~~~~~~~~~~~~ 100 (100)
T cd00189 81 LGKYEEALEAYEKALELDPN 100 (100)
T ss_pred HHhHHHHHHHHHHHHccCCC
Confidence 99999999999999988763
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.35 E-value=8.1e-12 Score=124.63 Aligned_cols=135 Identities=14% Similarity=0.115 Sum_probs=106.7
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRAL 432 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~ 432 (497)
+...+|+.+|..|.+++++|.|.-.|++|+ .+...+...|..+.+.|+.++|++.|++|+- ++|.++-.-|++|.
T Consensus 487 rhYnAwYGlG~vy~Kqek~e~Ae~~fqkA~~INP~nsvi~~~~g~~~~~~k~~d~AL~~~~~A~~-ld~kn~l~~~~~~~ 565 (638)
T KOG1126|consen 487 RHYNAWYGLGTVYLKQEKLEFAEFHFQKAVEINPSNSVILCHIGRIQHQLKRKDKALQLYEKAIH-LDPKNPLCKYHRAS 565 (638)
T ss_pred hhhHHHHhhhhheeccchhhHHHHHHHhhhcCCccchhHHhhhhHHHHHhhhhhHHHHHHHHHHh-cCCCCchhHHHHHH
Confidence 456777788888888888888888888777 5666777778888888888888888888887 88888888888888
Q ss_pred HHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccc
Q 010932 433 SYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQ 492 (497)
Q Consensus 433 ~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~ 492 (497)
+++.+++|++|+..+++.-++-|++..+++-+|.+|.++|+.+.|+..|--|+.|||+-.
T Consensus 566 il~~~~~~~eal~~LEeLk~~vP~es~v~~llgki~k~~~~~~~Al~~f~~A~~ldpkg~ 625 (638)
T KOG1126|consen 566 ILFSLGRYVEALQELEELKELVPQESSVFALLGKIYKRLGNTDLALLHFSWALDLDPKGA 625 (638)
T ss_pred HHHhhcchHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHccchHHHHhhHHHhcCCCccc
Confidence 888888888888888888888888888888888888888888888888888888887743
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.5e-12 Score=122.56 Aligned_cols=129 Identities=12% Similarity=0.204 Sum_probs=111.6
Q ss_pred HHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhh
Q 010932 362 LLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMI 437 (497)
Q Consensus 362 ~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~ 437 (497)
+-.++..|.+..+.++..+.|+++. +++..|+.+|..++-+++|++|+..|++||. ++|+++-+|..++.+.+++
T Consensus 363 yI~~a~~y~d~~~~~~~~~~F~~A~~ldp~n~dvYyHRgQm~flL~q~e~A~aDF~Kai~-L~pe~~~~~iQl~~a~Yr~ 441 (606)
T KOG0547|consen 363 YIKRAAAYADENQSEKMWKDFNKAEDLDPENPDVYYHRGQMRFLLQQYEEAIADFQKAIS-LDPENAYAYIQLCCALYRQ 441 (606)
T ss_pred HHHHHHHHhhhhccHHHHHHHHHHHhcCCCCCchhHhHHHHHHHHHHHHHHHHHHHHHhh-cChhhhHHHHHHHHHHHHH
Confidence 5667777788888888888888877 7888888888888888888888888888888 8888888888888888888
Q ss_pred hcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccc
Q 010932 438 EQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKK 491 (497)
Q Consensus 438 ~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~ 491 (497)
++++++..-|+.+++-=|+.++.|...|.++..++++++|++.|++|+.|+|+.
T Consensus 442 ~k~~~~m~~Fee~kkkFP~~~Evy~~fAeiLtDqqqFd~A~k~YD~ai~LE~~~ 495 (606)
T KOG0547|consen 442 HKIAESMKTFEEAKKKFPNCPEVYNLFAEILTDQQQFDKAVKQYDKAIELEPRE 495 (606)
T ss_pred HHHHHHHHHHHHHHHhCCCCchHHHHHHHHHhhHHhHHHHHHHHHHHHhhcccc
Confidence 888888888888888888888888888889999999999999999999998883
|
|
| >PRK15174 Vi polysaccharide export protein VexE; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=6.9e-12 Score=133.70 Aligned_cols=132 Identities=13% Similarity=0.061 Sum_probs=119.4
Q ss_pred HHHHHHhccccccccchhh----hhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHH
Q 010932 359 HDILLKTGYKDEEGAENEL----SFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRR 430 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~----a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~ 430 (497)
...+...|..+...|++++ |+..|++++ +++..+..+|..+...|++++|+..|+++++ ++|+++.+++++
T Consensus 246 ~~~~~~Lg~~l~~~G~~~eA~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~eA~~~l~~al~-l~P~~~~a~~~L 324 (656)
T PRK15174 246 AALRRSLGLAYYQSGRSREAKLQAAEHWRHALQFNSDNVRIVTLYADALIRTGQNEKAIPLLQQSLA-THPDLPYVRAMY 324 (656)
T ss_pred HHHHHHHHHHHHHcCCchhhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-hCCCCHHHHHHH
Confidence 4556677888888888875 788899888 6778899999999999999999999999999 999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccc
Q 010932 431 ALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKK 491 (497)
Q Consensus 431 g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~ 491 (497)
|.++.++|++++|+..|+++++.+|+++.+++.+|.++..+|++++|+..|+++++++|+.
T Consensus 325 a~~l~~~G~~~eA~~~l~~al~~~P~~~~~~~~~a~al~~~G~~deA~~~l~~al~~~P~~ 385 (656)
T PRK15174 325 ARALRQVGQYTAASDEFVQLAREKGVTSKWNRYAAAALLQAGKTSEAESVFEHYIQARASH 385 (656)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhChhh
Confidence 9999999999999999999999999998888888999999999999999999999998874
|
|
| >PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.3e-11 Score=103.51 Aligned_cols=100 Identities=14% Similarity=0.082 Sum_probs=94.5
Q ss_pred chhHHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHH
Q 010932 354 DLTAVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVR 429 (497)
Q Consensus 354 ~~~~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~ 429 (497)
..++..+.++..|....+.|++++|.+.|+-.. .++..|+++|.++-.+|+|++||++|.+|+. ++|+++.+++|
T Consensus 30 ~~~~~l~~lY~~A~~ly~~G~l~~A~~~f~~L~~~Dp~~~~y~~gLG~~~Q~~g~~~~AI~aY~~A~~-L~~ddp~~~~~ 108 (157)
T PRK15363 30 DVTQPLNTLYRYAMQLMEVKEFAGAARLFQLLTIYDAWSFDYWFRLGECCQAQKHWGEAIYAYGRAAQ-IKIDAPQAPWA 108 (157)
T ss_pred ChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-cCCCCchHHHH
Confidence 335667888999999999999999999999866 8999999999999999999999999999999 99999999999
Q ss_pred HHHHHHhhhcHHHHHHHHHHHHHhC
Q 010932 430 RALSYLMIEQAELALRDAMQAQVCL 454 (497)
Q Consensus 430 ~g~~~~~~~~~~~A~~~~~~al~l~ 454 (497)
.|.|++.+|+.+.|.+.|+.||.+.
T Consensus 109 ag~c~L~lG~~~~A~~aF~~Ai~~~ 133 (157)
T PRK15363 109 AAECYLACDNVCYAIKALKAVVRIC 133 (157)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999987
|
|
| >TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.7e-11 Score=114.38 Aligned_cols=136 Identities=11% Similarity=0.032 Sum_probs=121.0
Q ss_pred hHHHHHHHHhccccccccchhhhhhHHHHHHH-------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHH---
Q 010932 356 TAVHDILLKTGYKDEEGAENELSFQEWTQQVQ-------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGT--- 425 (497)
Q Consensus 356 ~~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~-------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~--- 425 (497)
+...+.++..|..+...++++.|+..|++.++ ...+++.+|..++..|++++|+..|+++++ ..|+++.
T Consensus 30 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~a~~~la~~~~~~~~~~~A~~~~~~~l~-~~p~~~~~~~ 108 (235)
T TIGR03302 30 EWPAEELYEEAKEALDSGDYTEAIKYFEALESRYPFSPYAEQAQLDLAYAYYKSGDYAEAIAAADRFIR-LHPNHPDADY 108 (235)
T ss_pred cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH-HCcCCCchHH
Confidence 34567889999999999999999999999872 236789999999999999999999999999 9998876
Q ss_pred HHHHHHHHHHhh--------hcHHHHHHHHHHHHHhCCCChHHH-----------------HHHHHHHHHCCChHHHHHH
Q 010932 426 VFVRRALSYLMI--------EQAELALRDAMQAQVCLPEWPTAF-----------------YMQALALNKLGMETDAQDM 480 (497)
Q Consensus 426 ~~~~~g~~~~~~--------~~~~~A~~~~~~al~l~p~~~~a~-----------------~~~g~~~~~~~~~~~A~~~ 480 (497)
+++.+|.+++.+ |++++|+..|+++++.+|++..++ +.+|..+...|++++|+..
T Consensus 109 a~~~~g~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~A~~~ 188 (235)
T TIGR03302 109 AYYLRGLSNYNQIDRVDRDQTAAREAFEAFQELIRRYPNSEYAPDAKKRMDYLRNRLAGKELYVARFYLKRGAYVAAINR 188 (235)
T ss_pred HHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHH
Confidence 799999999987 999999999999999999986543 4678899999999999999
Q ss_pred HHHhhcCccccc
Q 010932 481 LNDGASFEAKKQ 492 (497)
Q Consensus 481 ~~~a~~l~~~~~ 492 (497)
|+++++..|+.+
T Consensus 189 ~~~al~~~p~~~ 200 (235)
T TIGR03302 189 FETVVENYPDTP 200 (235)
T ss_pred HHHHHHHCCCCc
Confidence 999999877653
|
Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). |
| >PRK15174 Vi polysaccharide export protein VexE; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=8e-12 Score=133.22 Aligned_cols=128 Identities=16% Similarity=0.076 Sum_probs=119.3
Q ss_pred hccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHH----HHHHHHHHhhcCCCCcHHHHHHHHHHHHh
Q 010932 365 TGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKN----AIEYYSKLVSMMSVPSGTVFVRRALSYLM 436 (497)
Q Consensus 365 ~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~----Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~ 436 (497)
.+..+...|++++|+..|++++ +++..++.+|..+...|++++ |+..|+++++ ++|+++.++.++|.++..
T Consensus 218 l~~~l~~~g~~~eA~~~~~~al~~~p~~~~~~~~Lg~~l~~~G~~~eA~~~A~~~~~~Al~-l~P~~~~a~~~lg~~l~~ 296 (656)
T PRK15174 218 AVDTLCAVGKYQEAIQTGESALARGLDGAALRRSLGLAYYQSGRSREAKLQAAEHWRHALQ-FNSDNVRIVTLYADALIR 296 (656)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCchhhHHHHHHHHHHHHh-hCCCCHHHHHHHHHHHHH
Confidence 3455667899999999999988 568889999999999999986 8999999999 999999999999999999
Q ss_pred hhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccccc
Q 010932 437 IEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQN 493 (497)
Q Consensus 437 ~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~ 493 (497)
+|++++|+..++++++++|+++.+++++|.+|..+|++++|+..|+++++.+|....
T Consensus 297 ~g~~~eA~~~l~~al~l~P~~~~a~~~La~~l~~~G~~~eA~~~l~~al~~~P~~~~ 353 (656)
T PRK15174 297 TGQNEKAIPLLQQSLATHPDLPYVRAMYARALRQVGQYTAASDEFVQLAREKGVTSK 353 (656)
T ss_pred CCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCccchH
Confidence 999999999999999999999999999999999999999999999999999998653
|
|
| >PRK02603 photosystem I assembly protein Ycf3; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.7e-11 Score=108.35 Aligned_cols=104 Identities=17% Similarity=0.200 Sum_probs=96.7
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc---HHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHH
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS---GTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYM 463 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~---~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 463 (497)
..+..++.+|..+...|++++|+.+|++++. +.|+. +.+|+++|.++..+|++++|+..+++|++++|++..++..
T Consensus 33 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~-~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 111 (172)
T PRK02603 33 KEAFVYYRDGMSAQADGEYAEALENYEEALK-LEEDPNDRSYILYNMGIIYASNGEHDKALEYYHQALELNPKQPSALNN 111 (172)
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-HhhccchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHH
Confidence 6778899999999999999999999999998 76653 5799999999999999999999999999999999999999
Q ss_pred HHHHHHHCCC--------------hHHHHHHHHHhhcCcccc
Q 010932 464 QALALNKLGM--------------ETDAQDMLNDGASFEAKK 491 (497)
Q Consensus 464 ~g~~~~~~~~--------------~~~A~~~~~~a~~l~~~~ 491 (497)
+|.++..+|+ +++|+++++++++++|++
T Consensus 112 lg~~~~~~g~~~~a~~~~~~A~~~~~~A~~~~~~a~~~~p~~ 153 (172)
T PRK02603 112 IAVIYHKRGEKAEEAGDQDEAEALFDKAAEYWKQAIRLAPNN 153 (172)
T ss_pred HHHHHHHcCChHhHhhCHHHHHHHHHHHHHHHHHHHhhCchh
Confidence 9999999998 788999999999999875
|
|
| >PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=7.2e-12 Score=123.40 Aligned_cols=111 Identities=11% Similarity=0.089 Sum_probs=104.6
Q ss_pred HHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhh
Q 010932 362 LLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMI 437 (497)
Q Consensus 362 ~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~ 437 (497)
+...|...+..++++.|++.|++++ .++.+++++|.+++..|+|++|+.++++||+ ++|+++.+|+++|.+|+.+
T Consensus 5 l~~~a~~a~~~~~~~~Ai~~~~~Al~~~P~~~~a~~~~a~~~~~~g~~~eAl~~~~~Al~-l~P~~~~a~~~lg~~~~~l 83 (356)
T PLN03088 5 LEDKAKEAFVDDDFALAVDLYTQAIDLDPNNAELYADRAQANIKLGNFTEAVADANKAIE-LDPSLAKAYLRKGTACMKL 83 (356)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCcCCHHHHHHHHHHHHHh
Confidence 5667888888999999999999999 6789999999999999999999999999999 9999999999999999999
Q ss_pred hcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCC
Q 010932 438 EQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGM 473 (497)
Q Consensus 438 ~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~ 473 (497)
|+|++|+..|+++++++|+++.+...++.+...+..
T Consensus 84 g~~~eA~~~~~~al~l~P~~~~~~~~l~~~~~kl~~ 119 (356)
T PLN03088 84 EEYQTAKAALEKGASLAPGDSRFTKLIKECDEKIAE 119 (356)
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999777744
|
|
| >KOG1155 consensus Anaphase-promoting complex (APC), Cdc23 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.6e-11 Score=117.36 Aligned_cols=129 Identities=14% Similarity=0.063 Sum_probs=122.6
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRAL 432 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~ 432 (497)
.+..+|--.|-.+.++.+...|+++|+.|+ .+..+||.+|.+|.-++-..=|+-+|++|+. +.|+++..|-.+|.
T Consensus 362 ~~~~aWTLmGHEyvEmKNt~AAi~sYRrAvdi~p~DyRAWYGLGQaYeim~Mh~YaLyYfqkA~~-~kPnDsRlw~aLG~ 440 (559)
T KOG1155|consen 362 KYLSAWTLMGHEYVEMKNTHAAIESYRRAVDINPRDYRAWYGLGQAYEIMKMHFYALYYFQKALE-LKPNDSRLWVALGE 440 (559)
T ss_pred chhHHHHHhhHHHHHhcccHHHHHHHHHHHhcCchhHHHHhhhhHHHHHhcchHHHHHHHHHHHh-cCCCchHHHHHHHH
Confidence 345566678888999999999999999999 7899999999999999999999999999999 99999999999999
Q ss_pred HHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhc
Q 010932 433 SYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGAS 486 (497)
Q Consensus 433 ~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~ 486 (497)
||.++++.++|+.+|.+|+...-.+..+++++|.+|.+++++++|..+|++-++
T Consensus 441 CY~kl~~~~eAiKCykrai~~~dte~~~l~~LakLye~l~d~~eAa~~yek~v~ 494 (559)
T KOG1155|consen 441 CYEKLNRLEEAIKCYKRAILLGDTEGSALVRLAKLYEELKDLNEAAQYYEKYVE 494 (559)
T ss_pred HHHHhccHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999876
|
|
| >KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.1e-12 Score=111.47 Aligned_cols=101 Identities=22% Similarity=0.256 Sum_probs=96.1
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQAL 466 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 466 (497)
..+..+...|+.+|..+.|..||.+|.+||- ++|..+..|.|++.|++++.+++.+..++.+|++++|+.+.++|.+|.
T Consensus 8 ~~a~qlkE~gnk~f~~k~y~~ai~~y~raI~-~nP~~~~Y~tnralchlk~~~~~~v~~dcrralql~~N~vk~h~flg~ 86 (284)
T KOG4642|consen 8 ESAEQLKEQGNKCFIPKRYDDAIDCYSRAIC-INPTVASYYTNRALCHLKLKHWEPVEEDCRRALQLDPNLVKAHYFLGQ 86 (284)
T ss_pred hHHHHHHhccccccchhhhchHHHHHHHHHh-cCCCcchhhhhHHHHHHHhhhhhhhhhhHHHHHhcChHHHHHHHHHHH
Confidence 3456788999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhcCc
Q 010932 467 ALNKLGMETDAQDMLNDGASFE 488 (497)
Q Consensus 467 ~~~~~~~~~~A~~~~~~a~~l~ 488 (497)
++.....|++|+..+.+|..+-
T Consensus 87 ~~l~s~~~~eaI~~Lqra~sl~ 108 (284)
T KOG4642|consen 87 WLLQSKGYDEAIKVLQRAYSLL 108 (284)
T ss_pred HHHhhccccHHHHHHHHHHHHH
Confidence 9999999999999999997653
|
|
| >KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.31 E-value=6.6e-12 Score=115.64 Aligned_cols=104 Identities=19% Similarity=0.234 Sum_probs=100.7
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQAL 466 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 466 (497)
.+++..+.+|..++..|.|..|+..|..||+ .+|+++.++|.||.+|+.+|+-..|+.|++++|++.|++..|...+|.
T Consensus 36 advekhlElGk~lla~~Q~sDALt~yHaAve-~dp~~Y~aifrRaT~yLAmGksk~al~Dl~rVlelKpDF~~ARiQRg~ 114 (504)
T KOG0624|consen 36 ADVEKHLELGKELLARGQLSDALTHYHAAVE-GDPNNYQAIFRRATVYLAMGKSKAALQDLSRVLELKPDFMAARIQRGV 114 (504)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHc-CCchhHHHHHHHHHHHhhhcCCccchhhHHHHHhcCccHHHHHHHhch
Confidence 5677889999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhcCcccc
Q 010932 467 ALNKLGMETDAQDMLNDGASFEAKK 491 (497)
Q Consensus 467 ~~~~~~~~~~A~~~~~~a~~l~~~~ 491 (497)
+++++|++++|..+|++.+.-+|.+
T Consensus 115 vllK~Gele~A~~DF~~vl~~~~s~ 139 (504)
T KOG0624|consen 115 VLLKQGELEQAEADFDQVLQHEPSN 139 (504)
T ss_pred hhhhcccHHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999998854
|
|
| >KOG4555 consensus TPR repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.1e-11 Score=95.88 Aligned_cols=107 Identities=18% Similarity=0.179 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCC----hH
Q 010932 384 QQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEW----PT 459 (497)
Q Consensus 384 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~----~~ 459 (497)
.+++....+-.+|..+...|+.+.|++.|.+||. +-|.++.+|.||+.++.-+|+.++|++++++|+++..+. -.
T Consensus 38 ~~~e~S~~LEl~~valaE~g~Ld~AlE~F~qal~-l~P~raSayNNRAQa~RLq~~~e~ALdDLn~AleLag~~trtacq 116 (175)
T KOG4555|consen 38 QAIKASRELELKAIALAEAGDLDGALELFGQALC-LAPERASAYNNRAQALRLQGDDEEALDDLNKALELAGDQTRTACQ 116 (175)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHH-hcccchHhhccHHHHHHHcCChHHHHHHHHHHHHhcCccchHHHH
Confidence 3557777888899999999999999999999999 999999999999999999999999999999999998765 37
Q ss_pred HHHHHHHHHHHCCChHHHHHHHHHhhcCcccc
Q 010932 460 AFYMQALALNKLGMETDAQDMLNDGASFEAKK 491 (497)
Q Consensus 460 a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~ 491 (497)
+|..+|.+|..+|+-+.|..+|+.|.+|..+.
T Consensus 117 a~vQRg~lyRl~g~dd~AR~DFe~AA~LGS~F 148 (175)
T KOG4555|consen 117 AFVQRGLLYRLLGNDDAARADFEAAAQLGSKF 148 (175)
T ss_pred HHHHHHHHHHHhCchHHHHHhHHHHHHhCCHH
Confidence 89999999999999999999999999886543
|
|
| >PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.4e-12 Score=97.59 Aligned_cols=81 Identities=26% Similarity=0.353 Sum_probs=74.8
Q ss_pred cccHHHHHHHHHHHhhcCCCC--cHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHH
Q 010932 402 DKDFKNAIEYYSKLVSMMSVP--SGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQD 479 (497)
Q Consensus 402 ~~~~~~Ai~~~~~ai~~~~p~--~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~ 479 (497)
.|+|++|+..|+++++ .+|+ +...++++|.||+++|+|++|+..+++ ++.+|.+...++.+|.++.++|+|++|++
T Consensus 2 ~~~y~~Ai~~~~k~~~-~~~~~~~~~~~~~la~~~~~~~~y~~A~~~~~~-~~~~~~~~~~~~l~a~~~~~l~~y~eAi~ 79 (84)
T PF12895_consen 2 QGNYENAIKYYEKLLE-LDPTNPNSAYLYNLAQCYFQQGKYEEAIELLQK-LKLDPSNPDIHYLLARCLLKLGKYEEAIK 79 (84)
T ss_dssp TT-HHHHHHHHHHHHH-HHCGTHHHHHHHHHHHHHHHTTHHHHHHHHHHC-HTHHHCHHHHHHHHHHHHHHTT-HHHHHH
T ss_pred CccHHHHHHHHHHHHH-HCCCChhHHHHHHHHHHHHHCCCHHHHHHHHHH-hCCCCCCHHHHHHHHHHHHHhCCHHHHHH
Confidence 6899999999999999 8885 577899999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHh
Q 010932 480 MLNDG 484 (497)
Q Consensus 480 ~~~~a 484 (497)
.|++|
T Consensus 80 ~l~~~ 84 (84)
T PF12895_consen 80 ALEKA 84 (84)
T ss_dssp HHHHH
T ss_pred HHhcC
Confidence 99986
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.3e-11 Score=105.78 Aligned_cols=100 Identities=13% Similarity=0.048 Sum_probs=96.4
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQAL 466 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 466 (497)
+.+.+...+|..|++.|++..|...+++||+ .||+++.+|.-|+.+|.++|+.+.|-+.|++|+.++|++.+.+.|.|.
T Consensus 33 ~aa~arlqLal~YL~~gd~~~A~~nlekAL~-~DPs~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~~GdVLNNYG~ 111 (250)
T COG3063 33 EAAKARLQLALGYLQQGDYAQAKKNLEKALE-HDPSYYLAHLVRAHYYQKLGENDLADESYRKALSLAPNNGDVLNNYGA 111 (250)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-hCcccHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCCccchhhhhhH
Confidence 5567788999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhcC
Q 010932 467 ALNKLGMETDAQDMLNDGASF 487 (497)
Q Consensus 467 ~~~~~~~~~~A~~~~~~a~~l 487 (497)
-+..+|+|++|...|++|+..
T Consensus 112 FLC~qg~~~eA~q~F~~Al~~ 132 (250)
T COG3063 112 FLCAQGRPEEAMQQFERALAD 132 (250)
T ss_pred HHHhCCChHHHHHHHHHHHhC
Confidence 999999999999999999853
|
|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.8e-12 Score=125.30 Aligned_cols=107 Identities=25% Similarity=0.276 Sum_probs=102.5
Q ss_pred HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q 010932 388 DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALA 467 (497)
Q Consensus 388 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 467 (497)
.+..+.+.|+.++..++|+.|+..|.+||+ ++|+++..|.||+.++.+.++|..|+.|+.+||+++|...++|+++|.+
T Consensus 3 ~a~e~k~ean~~l~~~~fd~avdlysKaI~-ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~dP~~~K~Y~rrg~a 81 (476)
T KOG0376|consen 3 SAEELKNEANEALKDKVFDVAVDLYSKAIE-LDPNCAIYFANRALAHLKVESFGGALHDALKAIELDPTYIKAYVRRGTA 81 (476)
T ss_pred hhhhhhhHHhhhcccchHHHHHHHHHHHHh-cCCcceeeechhhhhheeechhhhHHHHHHhhhhcCchhhheeeeccHH
Confidence 356778899999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 468 LNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 468 ~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
.+.++++.+|+.+|++...+.|+++++-
T Consensus 82 ~m~l~~~~~A~~~l~~~~~l~Pnd~~~~ 109 (476)
T KOG0376|consen 82 VMALGEFKKALLDLEKVKKLAPNDPDAT 109 (476)
T ss_pred HHhHHHHHHHHHHHHHhhhcCcCcHHHH
Confidence 9999999999999999999999988753
|
|
| >CHL00033 ycf3 photosystem I assembly protein Ycf3 | Back alignment and domain information |
|---|
Probab=99.28 E-value=6.3e-11 Score=104.28 Aligned_cols=104 Identities=14% Similarity=0.158 Sum_probs=92.2
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCC---cHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHH
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVP---SGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYM 463 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~---~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 463 (497)
..+..++..|..+...|+|++|+..|++|+. +.|+ .+.+|+++|.++..+|++++|+..|++|++++|.+..++.+
T Consensus 33 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~-l~~~~~~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~~~~~~~~~~~~ 111 (168)
T CHL00033 33 KEAFTYYRDGMSAQSEGEYAEALQNYYEAMR-LEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFQALERNPFLPQALNN 111 (168)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-ccccchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHH
Confidence 5788899999999999999999999999998 7665 34699999999999999999999999999999999999999
Q ss_pred HHHHHH-------HCCChH-------HHHHHHHHhhcCcccc
Q 010932 464 QALALN-------KLGMET-------DAQDMLNDGASFEAKK 491 (497)
Q Consensus 464 ~g~~~~-------~~~~~~-------~A~~~~~~a~~l~~~~ 491 (497)
+|.++. .+|+++ +|+..|++++.++|.+
T Consensus 112 la~i~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~a~~~~p~~ 153 (168)
T CHL00033 112 MAVICHYRGEQAIEQGDSEIAEAWFDQAAEYWKQAIALAPGN 153 (168)
T ss_pred HHHHHHHhhHHHHHcccHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 999999 777877 5566666777888753
|
|
| >PRK15331 chaperone protein SicA; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.8e-11 Score=101.12 Aligned_cols=99 Identities=9% Similarity=-0.055 Sum_probs=96.4
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQAL 466 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 466 (497)
+..+..|..|..+|..|+|++|...|+-... .+|.+++.|+.+|.|+..+++|++|+..|..|..++++++...|..|.
T Consensus 35 ~~le~iY~~Ay~~y~~Gk~~eA~~~F~~L~~-~d~~n~~Y~~GLaa~~Q~~k~y~~Ai~~Y~~A~~l~~~dp~p~f~agq 113 (165)
T PRK15331 35 DMMDGLYAHAYEFYNQGRLDEAETFFRFLCI-YDFYNPDYTMGLAAVCQLKKQFQKACDLYAVAFTLLKNDYRPVFFTGQ 113 (165)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-hCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCccchHHH
Confidence 6778899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhc
Q 010932 467 ALNKLGMETDAQDMLNDGAS 486 (497)
Q Consensus 467 ~~~~~~~~~~A~~~~~~a~~ 486 (497)
+|+.+|+.++|+.+|+.|+.
T Consensus 114 C~l~l~~~~~A~~~f~~a~~ 133 (165)
T PRK15331 114 CQLLMRKAAKARQCFELVNE 133 (165)
T ss_pred HHHHhCCHHHHHHHHHHHHh
Confidence 99999999999999999987
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.8e-11 Score=101.61 Aligned_cols=143 Identities=17% Similarity=0.169 Sum_probs=107.1
Q ss_pred cccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCC--------hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 67 VSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD--------PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 67 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
+..+-+|+-+.|+++.+ .|+.+.||.-....... ..+..+|+++|.+++--.|.--.-++.+...-.|+||
T Consensus 12 l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME 90 (229)
T KOG3087|consen 12 LELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME 90 (229)
T ss_pred ceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence 34457888889999998 58888888643322211 2467889999999875555555555666666789999
Q ss_pred cCCC-CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC---CeeEcccCCcccc
Q 010932 139 YMPN-DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG---DPRLSSFGLMKNS 211 (497)
Q Consensus 139 ~~~~-~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~---~~kl~Dfgla~~~ 211 (497)
|++| .++.+++................+..|-+.+.-||..+ ++|+||..+||++..++ .+.++|||++...
T Consensus 91 ~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd-iiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 91 FIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND-IIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred eccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC-eecccccccceEEecCCCcCceEEEeecchhcc
Confidence 9987 47788876544444444455788999999999999999 99999999999997554 3589999997643
|
|
| >PRK11447 cellulose synthase subunit BcsC; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.7e-11 Score=139.38 Aligned_cols=132 Identities=14% Similarity=0.087 Sum_probs=120.0
Q ss_pred HhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHH--------------
Q 010932 364 KTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGT-------------- 425 (497)
Q Consensus 364 ~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~-------------- 425 (497)
..|..+...|++++|+..|++++ +++.+++.+|.++++.|++++|+..|+++++ ++|++..
T Consensus 274 ~~G~~~~~~g~~~~A~~~l~~aL~~~P~~~~a~~~Lg~~~~~~g~~~eA~~~l~~Al~-~~p~~~~~~~~~~ll~~~~~~ 352 (1157)
T PRK11447 274 AQGLAAVDSGQGGKAIPELQQAVRANPKDSEALGALGQAYSQQGDRARAVAQFEKALA-LDPHSSNRDKWESLLKVNRYW 352 (1157)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCCccchhHHHHHHHhhhHH
Confidence 34777888999999999999988 5788999999999999999999999999999 9998653
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCCC
Q 010932 426 VFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSWR 496 (497)
Q Consensus 426 ~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~~ 496 (497)
....+|.++.+.|++++|+..|+++++++|+++.+++.+|.++..+|++++|++.|++|++++|.+..+|+
T Consensus 353 ~~~~~g~~~~~~g~~~eA~~~~~~Al~~~P~~~~a~~~Lg~~~~~~g~~~eA~~~y~~aL~~~p~~~~a~~ 423 (1157)
T PRK11447 353 LLIQQGDAALKANNLAQAERLYQQARQVDNTDSYAVLGLGDVAMARKDYAAAERYYQQALRMDPGNTNAVR 423 (1157)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 22456889999999999999999999999999999999999999999999999999999999999877653
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 497 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 3e-27 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 9e-27 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 7e-25 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 7e-25 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 9e-25 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 2e-24 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 8e-24 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 1e-22 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 8e-12 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 1e-11 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 1e-11 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 1e-11 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 2e-11 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 2e-11 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 2e-11 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 5e-11 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 5e-11 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 7e-11 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 7e-11 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 8e-11 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 8e-11 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 8e-11 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 8e-11 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 9e-11 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 1e-10 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 1e-10 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 2e-10 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 3e-10 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 3e-10 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 3e-10 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 5e-10 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 5e-10 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 6e-10 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 6e-10 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 6e-10 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 6e-10 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 6e-10 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 6e-10 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 7e-10 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 7e-10 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 8e-10 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 1e-09 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 2e-09 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 3e-09 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 3e-09 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 4e-09 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 4e-09 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 4e-09 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 8e-09 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 9e-09 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 9e-09 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 1e-08 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 1e-08 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 1e-08 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 1e-08 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 1e-08 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-08 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 1e-08 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 1e-08 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 1e-08 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 1e-08 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 1e-08 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 1e-08 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 1e-08 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 1e-08 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-08 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 2e-08 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 2e-08 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 2e-08 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 2e-08 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 2e-08 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 2e-08 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 2e-08 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 2e-08 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 2e-08 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 2e-08 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 2e-08 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 3e-08 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 3e-08 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 3e-08 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 3e-08 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 3e-08 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 3e-08 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 4e-08 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 4e-08 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 4e-08 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 4e-08 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 4e-08 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 4e-08 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 4e-08 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 4e-08 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 4e-08 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 5e-08 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 5e-08 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 5e-08 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 5e-08 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 5e-08 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 6e-08 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 6e-08 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 7e-08 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 7e-08 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 8e-08 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 9e-08 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 1e-07 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 1e-07 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 2e-07 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 2e-07 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 3e-07 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 3e-07 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 4e-07 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 4e-07 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 4e-07 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 4e-07 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 5e-07 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 5e-07 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 6e-07 | ||
| 1u59_A | 287 | Crystal Structure Of The Zap-70 Kinase Domain In Co | 6e-07 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 6e-07 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 7e-07 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 9e-07 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 9e-07 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 1e-06 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 1e-06 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 1e-06 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 1e-06 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 1e-06 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 1e-06 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 1e-06 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 1e-06 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 1e-06 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 1e-06 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 2e-06 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 2e-06 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-06 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 2e-06 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 2e-06 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 2e-06 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 2e-06 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 2e-06 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-06 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 2e-06 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 2e-06 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 2e-06 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 2e-06 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 2e-06 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 2e-06 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-06 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 2e-06 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 2e-06 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 2e-06 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 2e-06 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 2e-06 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 2e-06 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 2e-06 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 2e-06 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 2e-06 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 2e-06 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 2e-06 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 2e-06 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 2e-06 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 2e-06 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 2e-06 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 3e-06 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 3e-06 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 3e-06 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 3e-06 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 3e-06 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 3e-06 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 3e-06 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 3e-06 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 3e-06 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 3e-06 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 3e-06 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 3e-06 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 3e-06 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 3e-06 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 4e-06 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 4e-06 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 4e-06 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 4e-06 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 4e-06 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 4e-06 | ||
| 2ozo_A | 613 | Autoinhibited Intact Human Zap-70 Length = 613 | 4e-06 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-06 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 5e-06 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 5e-06 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 5e-06 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 5e-06 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 5e-06 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 5e-06 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 5e-06 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 5e-06 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 5e-06 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 6e-06 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 6e-06 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 6e-06 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 6e-06 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 6e-06 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 7e-06 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 7e-06 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 8e-06 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 8e-06 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 9e-06 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-05 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-05 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 1e-05 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 1e-05 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 1e-05 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 1e-05 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 1e-05 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 1e-05 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 1e-05 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 1e-05 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 1e-05 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 1e-05 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 1e-05 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 1e-05 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 2e-05 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 2e-05 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 2e-05 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 2e-05 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 2e-05 | ||
| 1mrv_A | 339 | Crystal Structure Of An Inactive Akt2 Kinase Domain | 2e-05 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 2e-05 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-05 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 2e-05 | ||
| 3t8o_A | 543 | Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu | 2e-05 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 2e-05 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 2e-05 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 2e-05 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 2e-05 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 2e-05 | ||
| 3c4x_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 3e-05 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 3e-05 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 3e-05 | ||
| 1gzn_A | 335 | Structure Of Pkb Kinase Domain Length = 335 | 3e-05 | ||
| 3c4w_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 3e-05 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 3e-05 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-05 | ||
| 1gzk_A | 315 | Molecular Mechanism For The Regulation Of Protein K | 3e-05 | ||
| 3qc9_A | 543 | Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4 | 3e-05 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 3e-05 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-05 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 3e-05 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 3e-05 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 3e-05 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 3e-05 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 3e-05 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 3e-05 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 3e-05 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 3e-05 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 4e-05 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 4e-05 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 4e-05 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 4e-05 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 4e-05 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 4e-05 | ||
| 1o6l_A | 337 | Crystal Structure Of An Activated Akt/protein Kinas | 4e-05 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 4e-05 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 4e-05 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 4e-05 | ||
| 2jdo_A | 342 | Structure Of Pkb-Beta (Akt2) Complexed With Isoquin | 4e-05 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 4e-05 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 4e-05 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 4e-05 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 4e-05 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 4e-05 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 4e-05 | ||
| 1o6k_A | 336 | Structure Of Activated Form Of Pkb Kinase Domain S4 | 4e-05 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 5e-05 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 5e-05 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 5e-05 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 5e-05 | ||
| 3e87_A | 335 | Crystal Structures Of The Kinase Domain Of Akt2 In | 5e-05 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-05 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-05 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 5e-05 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 5e-05 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 5e-05 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 6e-05 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 6e-05 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 6e-05 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 7e-05 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 7e-05 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 8e-05 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 8e-05 | ||
| 3fzo_A | 277 | Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin | 9e-05 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 9e-05 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 1e-04 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 1e-04 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 1e-04 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 1e-04 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 1e-04 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 1e-04 | ||
| 2uv2_A | 287 | Crystal Structure Of Human Ste20-Like Kinase Bound | 1e-04 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 2e-04 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 2e-04 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 2e-04 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 2e-04 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 2e-04 | ||
| 4dc2_A | 396 | Structure Of Pkc In Complex With A Substrate Peptid | 2e-04 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 3e-04 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 4e-04 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 4e-04 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 4e-04 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 4e-04 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 4e-04 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 5e-04 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 5e-04 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 5e-04 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 5e-04 | ||
| 1zrz_A | 364 | Crystal Structure Of The Catalytic Domain Of Atypic | 6e-04 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 6e-04 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 6e-04 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 7e-04 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 7e-04 | ||
| 3zh8_A | 349 | A Novel Small Molecule Apkc Inhibitor Length = 349 | 7e-04 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 7e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335 | Back alignment and structure |
|
| >pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315 | Back alignment and structure |
|
| >pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 210 bits (536), Expect = 3e-64
Identities = 85/296 (28%), Positives = 142/296 (47%), Gaps = 26/296 (8%)
Query: 34 EGEEGEEEQVPAFKEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKR 93
EE E + K F L +L+ A++ FS++ I+ G VY+GRL + LVA+KR
Sbjct: 5 PAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGF---GKVYKGRLADGTLVAVKR 61
Query: 94 FSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLF-- 150
+ QF TE + H+ L+ L G C ERLLV YM N +++ L
Sbjct: 62 LKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER 121
Query: 151 HWDKQPLPWEMRVRVAYYIAQALD--HCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLM 208
+ PL W R R+A A+ L H + + ++ D+ A +L DE+ + + FGL
Sbjct: 122 PESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 181
Query: 209 KNSRDGKSY-STNLA----YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGK-----HIPP 258
K ++ +T + + PE+L TG+ ++ ++ YG +LL+L++G+
Sbjct: 182 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA 241
Query: 259 --------SHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306
+++ K L L+D L+G Y +E+ QL+++A C Q +RP
Sbjct: 242 NDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERP 297
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 204 bits (521), Expect = 6e-62
Identities = 85/297 (28%), Positives = 140/297 (47%), Gaps = 32/297 (10%)
Query: 49 FVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTE 108
L DL ATN F + ++ VY+G L++ VA+KR + +S +F TE
Sbjct: 29 VPLVDLEEATNNFDHKFLIGHGVF---GKVYKGVLRDGAKVALKRRTPESSQGIEEFETE 85
Query: 109 AAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLF--HWDKQPLPWEMRVRVA 166
L RH LV+LIG C E +E +L+ +YM N L +HL+ + WE R+ +
Sbjct: 86 IETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEIC 145
Query: 167 YYIAQALD--HCNSQNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMK-NSRDGKSY-STNL 221
A+ L H R + H D+ + +L DE+ P+++ FG+ K + +++ ST +
Sbjct: 146 IGAARGLHYLH----TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVV 201
Query: 222 AYTP----PEFLRTGRVIPESVIYSYGTVLLDLLSGK----HIPPSH-------ALDVIR 266
T PE+ GR+ +S +YS+G VL ++L + P A++
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN 261
Query: 267 GKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP---DVKFLLSAVAPLQK 320
L ++D +L + E + + A KCL ++DRP DV + L LQ+
Sbjct: 262 NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 202 bits (517), Expect = 1e-61
Identities = 78/305 (25%), Positives = 132/305 (43%), Gaps = 48/305 (15%)
Query: 37 EGEEEQVPA--FKEFVLADLRAATNGFSSELIVSESGDKAPNV--------VYRGRLKNN 86
E + +V F F +L+ TN F I N VY+G + NN
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGG-----NKMGEGGFGVVYKGYV-NN 54
Query: 87 RLVAIKRFSRQSWPDPHQ----FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142
VA+K+ + + F E + +H+ LV L+G ++GD+ LV YMPN
Sbjct: 55 TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPN 114
Query: 143 DTLSKHLFHWDKQ-PLPWEMRVRVAYYIAQAL----DHCNSQNRKLYHDLNAYRVLFDED 197
+L L D PL W MR ++A A + ++ + ++ D+ + +L DE
Sbjct: 115 GSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEA 169
Query: 198 GDPRLSSFGLMK-NSRDGKSY-STNLA----YTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
++S FGL + + + ++ ++ + Y PE L G + P+S IYS+G VLL+++
Sbjct: 170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEII 228
Query: 252 SGK-----HIPPSHALD-----VIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYE 301
+G H P LD K + +D + + + +AS+CL +
Sbjct: 229 TGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEK 287
Query: 302 AKDRP 306
RP
Sbjct: 288 KNKRP 292
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 6e-29
Identities = 56/321 (17%), Positives = 105/321 (32%), Gaps = 55/321 (17%)
Query: 48 EFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFS---RQSWPDPHQ 104
+ +L + + + V++ +L N VA+K F +QSW Q
Sbjct: 13 DLGTENLYFQSMPLQLLEVKARGRFG---CVWKAQL-LNEYVAVKIFPIQDKQSW----Q 64
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGD----ERLLVAQYMPNDTLSKHLFHWDKQPLPWE 160
E L ++H+ ++ IG G + L+ + +LS L + W
Sbjct: 65 NEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK---ANVVSWN 121
Query: 161 MRVRVAYYIAQALDH--------CNSQNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNS 211
+A +A+ L + + + H D+ + VL + ++ FGL
Sbjct: 122 ELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF 181
Query: 212 RDGKSYSTNLA------YTPPEFLRTGRVIPESV-----IYSYGTVLLDLLSGK------ 254
GKS Y PE L +Y+ G VL +L S
Sbjct: 182 EAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP 241
Query: 255 ----------HIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT-QLVELASKCLQYEAK 303
I +L+ ++ + L + L E +C ++A+
Sbjct: 242 VDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAE 301
Query: 304 DRPDVKFLLSAVAPLQKQTEV 324
R + + +Q+ T +
Sbjct: 302 ARLSAGCVGERITQMQRLTNI 322
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 3e-26
Identities = 41/257 (15%), Positives = 91/257 (35%), Gaps = 22/257 (8%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPDPH--QFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134
+++GR + N + +K + W F E L H ++ ++G C
Sbjct: 25 ELWKGRWQGN-DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 135 L--VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYR 191
+ +MP +L L + V+ A +A+ + ++ + LN+
Sbjct: 84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRS 143
Query: 192 VLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESV---IYSYGTVLL 248
V+ DED R+S + K S A+ PE L+ ++S+ +L
Sbjct: 144 VMIDEDMTARISMADV-KFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLW 202
Query: 249 DLLSGK----HIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKD 304
+L++ + + + + L + + + +L C+ +
Sbjct: 203 ELVTREVPFADLSNMEIGMKVALEGLRPTIPPGIS--------PHVSKLMKICMNEDPAK 254
Query: 305 RPDVKFLLSAVAPLQKQ 321
RP ++ + +Q +
Sbjct: 255 RPKFDMIVPILEKMQDK 271
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 4e-26
Identities = 53/243 (21%), Positives = 105/243 (43%), Gaps = 21/243 (8%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPDPH--QFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134
V+R VA+K Q + +F+ E A + +RH +V +G +
Sbjct: 52 TVHRAEWHG-SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110
Query: 135 LVAQYMPNDTLSKHLF-HWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYRV 192
+V +Y+ +L + L ++ L R+ +AY +A+ +++ +++N + H +L + +
Sbjct: 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNL 170
Query: 193 LFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSYGTVLL 248
L D+ ++ FGL + S + A TP PE LR +S +YS+G +L
Sbjct: 171 LVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILW 230
Query: 249 DLLSGK----HIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKD 304
+L + + ++ P+ + + K L + +L Q+ + C E
Sbjct: 231 ELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLN--------PQVAAIIEGCWTNEPWK 282
Query: 305 RPD 307
RP
Sbjct: 283 RPS 285
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 1e-25
Identities = 53/262 (20%), Positives = 112/262 (42%), Gaps = 30/262 (11%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPH--QFVTEAAGLGNVRHKRLVNLIGCCAEGDERL- 134
VY+G+ + VA+K + + F E L RH ++ +G +L
Sbjct: 40 VYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA--PQLA 95
Query: 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYRVL 193
+V Q+ +L HL H + + + +A A+ +D+ ++++ + H DL + +
Sbjct: 96 IVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIF 152
Query: 194 FDEDGDPRLSSFGL--MKNSRDGKSYSTN----LAYTPPEFLRTGRVIPESV---IYSYG 244
ED ++ FGL K+ G + + PE +R P S +Y++G
Sbjct: 153 LHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212
Query: 245 TVLLDLLSGK-----HIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299
VL +L++G+ ++++ G+ L S + + ++ L ++CL+
Sbjct: 213 IVLYELMTGQLPYSNINNRDQIIEMV-GRGSLSPDLSKV----RSNCPKRMKRLMAECLK 267
Query: 300 YEAKDRPDVKFLLSAVAPLQKQ 321
+ +RP +L+ + L ++
Sbjct: 268 KKRDERPSFPRILAEIEELARE 289
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 1e-24
Identities = 49/279 (17%), Positives = 94/279 (33%), Gaps = 45/279 (16%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPDPH--QFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134
VY GR VAI+ + + F E RH+ +V +G C
Sbjct: 48 QVYHGRWHGE--VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA 105
Query: 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALD--HCNSQNRKLYH-DLNAYR 191
++ TL + K L ++A I + + H + + H DL +
Sbjct: 106 IITSLCKGRTLYSVV-RDAKIVLDVNKTRQIAQEIVKGMGYLH----AKGILHKDLKSKN 160
Query: 192 VLFDEDGDPRLSSFGL--MKNSRDGKSYSTNL-------AYTPPEFLRTGRVIPESV--- 239
V +D +G ++ FGL + L + PE +R E
Sbjct: 161 VFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLP 219
Query: 240 ------IYSYGTVLLDLLSGK----HIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA-T 288
+++ GT+ +L + + P + + G + + +
Sbjct: 220 FSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQM-GTGMKPNL--------SQIGMGK 270
Query: 289 QLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVASH 327
++ ++ C +E ++RP L+ + L K+ SH
Sbjct: 271 EISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSH 309
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 4e-23
Identities = 51/251 (20%), Positives = 90/251 (35%), Gaps = 32/251 (12%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPDPH----QFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
VYR VA+K D EA ++H ++ L G C +
Sbjct: 22 KVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN 80
Query: 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALD--HCNSQNRKLYHDLNAY 190
LV ++ L++ L + +P ++ V A IA+ ++ H + ++ DL +
Sbjct: 81 LCLVMEFARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSS 137
Query: 191 RVLFDEDGDPRLSS--------FGL--MKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVI 240
+L + + S FGL + S + A+ PE +R S +
Sbjct: 138 NILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDV 197
Query: 241 YSYGTVLLDLLSGK----HIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296
+SYG +L +LL+G+ I + L L + S+ +L
Sbjct: 198 WSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCP--------EPFAKLMED 249
Query: 297 CLQYEAKDRPD 307
C + RP
Sbjct: 250 CWNPDPHSRPS 260
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 96.2 bits (240), Expect = 2e-22
Identities = 50/258 (19%), Positives = 93/258 (36%), Gaps = 42/258 (16%)
Query: 77 VVYRGRLK-NNRLVAIKRFSRQSWPDPH-------QFVTEAAGLGNVRHKRLVNLIGCCA 128
+V++GRL + +VAIK +F E + N+ H +V L G
Sbjct: 34 LVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH 93
Query: 129 EGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DL 187
+V +++P L L P+ W +++R+ IA +++ +QN + H DL
Sbjct: 94 NPP--RMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDL 150
Query: 188 NAYRVLFDEDGDPR-----LSSFGLMKNSRDGKSYST----NLAYTPPEFLRTGRVIP-- 236
+ + + ++ FGL S+ + N + PE +
Sbjct: 151 RSPNIFLQSLDENAPVCAKVADFGL---SQQSVHSVSGLLGNFQWMAPETIG-AEEESYT 206
Query: 237 ESV-IYSYGTVLLDLLSGK----HIPPSHALDV--IRGKNLLLLMDSSLEGQYANEDATQ 289
E YS+ +L +L+G+ + IR + L + +
Sbjct: 207 EKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCP--------PR 258
Query: 290 LVELASKCLQYEAKDRPD 307
L + C + K RP
Sbjct: 259 LRNVIELCWSGDPKKRPH 276
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 96.2 bits (240), Expect = 2e-22
Identities = 47/247 (19%), Positives = 90/247 (36%), Gaps = 35/247 (14%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136
VV + + + + VAIK+ +S + F+ E L V H +V L G C + LV
Sbjct: 23 VVCKAKWRA-KDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLV 77
Query: 137 AQYMPNDTLSKHLFHWDKQP--LPWEMRVRVAYYIAQALD--HCNSQNRKLYHDLNAYRV 192
+Y +L L H + + +Q + H ++ DL +
Sbjct: 78 MEYAEGGSLYNVL-HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNL 136
Query: 193 LFDEDGD-PRLSSFGLMKNSRDGKSYSTN----LAYTPPEFLRTGRVIPESV-IYSYGTV 246
L G ++ FG + D +++ TN A+ PE G E ++S+G +
Sbjct: 137 LLVAGGTVLKICDFGT---ACDIQTHMTNNKGSAAWMAPEVFE-GSNYSEKCDVFSWGII 192
Query: 247 LLDLLSGK------HIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQY 300
L ++++ + P + + + +L + L ++C
Sbjct: 193 LWEVITRRKPFDEIGGPAFRIMWAVH-NGTRPPLIKNLP--------KPIESLMTRCWSK 243
Query: 301 EAKDRPD 307
+ RP
Sbjct: 244 DPSQRPS 250
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 96.3 bits (240), Expect = 3e-22
Identities = 46/273 (16%), Positives = 92/273 (33%), Gaps = 40/273 (14%)
Query: 78 VYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136
+ + ++ +K R F+ E + + H ++ IG + +
Sbjct: 26 AIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85
Query: 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYRVLFD 195
+Y+ TL + PW RV A IA + + +S N + H DLN++ L
Sbjct: 86 TEYIKGGTLRGII-KSMDSQYPWSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVR 142
Query: 196 EDGDPRLSSFGL----------------MKNSRDGKSYST--NLAYTPPEFLRTGRVIPE 237
E+ + ++ FGL +K K Y+ N + PE + +
Sbjct: 143 ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEK 202
Query: 238 SVIYSYGTVLLDLLSGKHIPP-------SHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290
++S+G VL +++ + P L+V + +
Sbjct: 203 VDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCP----------PSF 252
Query: 291 VELASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323
+ +C + + RP L + L+
Sbjct: 253 FPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 88.4 bits (219), Expect = 2e-19
Identities = 56/302 (18%), Positives = 98/302 (32%), Gaps = 65/302 (21%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAA--GLGNVRHKRLVNLIGCCAEGD---- 131
VY+G L + R VA+K FS + F+ E + + H + I
Sbjct: 29 VYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGR 84
Query: 132 -ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDH-------CNSQNRKL 183
E LLV +Y PN +L K+L W R+A+ + + L + + +
Sbjct: 85 MEYLLVMEYYPNGSLXKYLS---LHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAI 141
Query: 184 YH-DLNAYRVLFDEDGDPRLSSFGL--------MKNSRDGKSYSTNLA----YTPPEFLR 230
H DLN+ VL DG +S FGL + + + + + Y PE L
Sbjct: 142 SHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLE 201
Query: 231 -------TGRVIPESVIYSYGTVLLDLLS----------------------GKHIPPSHA 261
+ + +Y+ G + ++ G H
Sbjct: 202 GAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDM 261
Query: 262 LDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321
++ + + + + L E C +A+ R + +A L
Sbjct: 262 QVLVSREKQRPKFPEAWKEN--SLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319
Query: 322 TE 323
E
Sbjct: 320 WE 321
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 84.0 bits (208), Expect = 2e-17
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 10/186 (5%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G VAIK + P F+ EA + +RH++LV L +E + +V
Sbjct: 200 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYRVLFDE 196
+YM +L L + L V +A IA + + N H DL A +L E
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE 315
Query: 197 DGDPRLSSFGLMKNSRDGKSYSTNLA-----YTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+ +++ FGL + D + + A +T PE GR +S ++S+G +L +L
Sbjct: 316 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 375
Query: 252 SGKHIP 257
+ +P
Sbjct: 376 TKGRVP 381
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 84.2 bits (208), Expect = 2e-17
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 10/186 (5%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G VAIK + P F+ EA + +RH++LV L +E + +V
Sbjct: 283 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYRVLFDE 196
+YM +L L + L V +A IA + + N H DL A +L E
Sbjct: 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE 398
Query: 197 DGDPRLSSFGLMKNSRDGKSYSTNLA-----YTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+ +++ FGL + D + + A +T PE GR +S ++S+G +L +L
Sbjct: 399 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 458
Query: 252 SGKHIP 257
+ +P
Sbjct: 459 TKGRVP 464
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 82.1 bits (203), Expect = 6e-17
Identities = 38/186 (20%), Positives = 79/186 (42%), Gaps = 10/186 (5%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ + VA+K + F+ EA + ++H +LV L + + ++
Sbjct: 204 VWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 261
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYRVLFDE 196
++M +L L + P + + IA+ + +N H DL A +L
Sbjct: 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSA 319
Query: 197 DGDPRLSSFGLMKNSRDGKSYSTNLA-----YTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+++ FGL + D + + A +T PE + G +S ++S+G +L++++
Sbjct: 320 SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 379
Query: 252 SGKHIP 257
+ IP
Sbjct: 380 TYGRIP 385
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 81.4 bits (201), Expect = 1e-16
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 10/187 (5%)
Query: 78 VYRGRLKNNRL-VAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136
VY G K L VA+K ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 236 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294
Query: 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYRVLFD 195
++M L +L ++Q + + + +A I+ A+++ +N H +L A L
Sbjct: 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVG 352
Query: 196 EDGDPRLSSFGL---MKNSRDGKSYSTNLAY--TPPEFLRTGRVIPESVIYSYGTVLLDL 250
E+ +++ FGL M T PE L + +S ++++G +L ++
Sbjct: 353 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
Query: 251 LSGKHIP 257
+ P
Sbjct: 413 ATYGMSP 419
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 79.4 bits (196), Expect = 2e-16
Identities = 39/211 (18%), Positives = 76/211 (36%), Gaps = 36/211 (17%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEA--AGLGNVRHKRLVNLIGCCAEGD---- 131
V+RG+ + VA+K FS + + + EA +RH+ ++ I + +
Sbjct: 58 VWRGKWRG-EEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113
Query: 132 ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH------ 185
+ LV+ Y + +L +L ++ + E +++A A L H + +
Sbjct: 114 QLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 170
Query: 186 -DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA--------YTPPEFLRTGRVIP 236
DL + +L ++G ++ GL Y PE L +
Sbjct: 171 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD-DSINM 229
Query: 237 ESV-------IYSYGTVLLDLLSGKHIPPSH 260
+ IY+ G V ++ I H
Sbjct: 230 KHFESFKRADIYAMGLVFWEIARRCSIGGIH 260
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 79.3 bits (196), Expect = 4e-16
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 15/177 (8%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL-LV 136
V G + N+ VA+K + F+ EA+ + +RH LV L+G E L +V
Sbjct: 209 VMLGDYRGNK-VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265
Query: 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYRVLFD 195
+YM +L +L + L + ++ + + +A+++ N H DL A VL
Sbjct: 266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVS 323
Query: 196 EDGDPRLSSFGLMKNSRD--GKSYSTNLAY--TPPEFLRTGRVIPESVIYSYGTVLL 248
ED ++S FGL +++ + L T PE LR + +S ++S+G +LL
Sbjct: 324 EDNVAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFG-ILL 376
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 8e-16
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 14/177 (7%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL-L 135
V G + N+ VA+K + F+ EA+ + +RH LV L+G E L +
Sbjct: 36 DVMLGDYRGNK-VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92
Query: 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYRVLF 194
V +YM +L +L + L + ++ + + +A+++ N H DL A VL
Sbjct: 93 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLV 150
Query: 195 DEDGDPRLSSFGLMKNSRDG--KSYSTNLAY--TPPEFLRTGRVIPESVIYSYGTVL 247
ED ++S FGL +++ + L T PE LR + +S ++S+G +L
Sbjct: 151 SEDNVAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 204
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 9e-16
Identities = 38/198 (19%), Positives = 68/198 (34%), Gaps = 36/198 (18%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAA--GLGNVRHKRLVNLIGCCAEGD---- 131
V+RG VA+K FS + D + E +RH+ ++ I
Sbjct: 24 VWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79
Query: 132 ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDH------CNSQNRKLYH 185
+ L+ Y +L +L L +R+ IA L H + H
Sbjct: 80 QLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAH 136
Query: 186 -DLNAYRVLFDEDGDPRLSSFGL----MKNSRDGKSYSTNLA----YTPPEFLRTGRVIP 236
DL + +L ++G ++ GL +++ + Y PE L +
Sbjct: 137 RDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD-ETIQV 195
Query: 237 ESV-------IYSYGTVL 247
+ I+++G VL
Sbjct: 196 DCFDSYKRVDIWAFGLVL 213
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 1e-15
Identities = 55/260 (21%), Positives = 110/260 (42%), Gaps = 24/260 (9%)
Query: 77 VVYRGRLKNNRL-VAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
VY G K L VA+K ++ + +F+ EAA + ++H LV L+G C +
Sbjct: 28 EVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYRVLF 194
+ ++M L +L ++Q + + + +A I+ A+++ +N H DL A L
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLV 144
Query: 195 DEDGDPRLSSFGLMKNSRDGKSYSTNLA-----YTPPEFLRTGRVIPESVIYSYGTVLLD 249
E+ +++ FGL + + A +T PE L + +S ++++G +L +
Sbjct: 145 GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
Query: 250 LLSGKHIP-----PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKD 304
+ + P S +++ + + E Y EL C Q+ D
Sbjct: 205 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY---------ELMRACWQWNPSD 255
Query: 305 RPDVKFLLSAVAPLQKQTEV 324
RP + A + +++ +
Sbjct: 256 RPSFAEIHQAFETMFQESSI 275
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 1e-15
Identities = 41/187 (21%), Positives = 80/187 (42%), Gaps = 10/187 (5%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136
VV G+ K VA+K ++ +F EA + + H +LV G C++ +V
Sbjct: 23 VVKLGKWKGQYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81
Query: 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYRVLFD 195
+Y+ N L +L + L + + Y + + + S H DL A L D
Sbjct: 82 TEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLESHQ--FIHRDLAARNCLVD 138
Query: 196 EDGDPRLSSFGLMKNSRDGKSYSTNLA-----YTPPEFLRTGRVIPESVIYSYGTVLLDL 250
D ++S FG+ + D + S+ ++ PE + +S ++++G ++ ++
Sbjct: 139 RDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEV 198
Query: 251 LSGKHIP 257
S +P
Sbjct: 199 FSLGKMP 205
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 76.7 bits (189), Expect = 1e-15
Identities = 50/293 (17%), Positives = 96/293 (32%), Gaps = 56/293 (19%)
Query: 78 VYRGRLKNNRLVAIKRFS---RQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER- 133
V+ G+ + VA+K F SW TE +RH+ ++ I +G
Sbjct: 53 VWMGKWRG-EKVAVKVFFTTEEASW----FRETEIYQTVLMRHENILGFIAADIKGTGSW 107
Query: 134 ---LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDH------CNSQNRKLY 184
L+ Y N +L +L L + +++AY L H +
Sbjct: 108 TQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIA 164
Query: 185 H-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN--------LAYTPPEFLRTGRVI 235
H DL + +L ++G ++ GL + Y PPE L +
Sbjct: 165 HRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLD-ESLN 223
Query: 236 PESV-------IYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA----- 283
+YS+G +L ++ + + + L+ D S E
Sbjct: 224 RNHFQSYIMADMYSFGLILWEVARRC-VSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIK 282
Query: 284 ------------NEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEV 324
+E Q+ +L ++C + R + +A + + ++
Sbjct: 283 KLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDI 335
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 74.9 bits (185), Expect = 3e-15
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 10/187 (5%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136
+V+ G N VAIK R+ F+ EA + + H +LV L G C E LV
Sbjct: 23 LVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81
Query: 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYRVLFD 195
++M + LS +L + E + + + + + + + H DL A L
Sbjct: 82 TEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVG 138
Query: 196 EDGDPRLSSFGLMKNSRDGKSYSTNLA-----YTPPEFLRTGRVIPESVIYSYGTVLLDL 250
E+ ++S FG+ + D + S+ + PE R +S ++S+G ++ ++
Sbjct: 139 ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 198
Query: 251 LSGKHIP 257
S IP
Sbjct: 199 FSEGKIP 205
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 5e-15
Identities = 45/187 (24%), Positives = 91/187 (48%), Gaps = 10/187 (5%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136
VV G+ + VAIK ++ +F+ EA + N+ H++LV L G C + ++
Sbjct: 39 VVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97
Query: 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYRVLFD 195
+YM N L +L + ++ + + + +A+++ S+ H DL A L +
Sbjct: 98 TEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVN 154
Query: 196 EDGDPRLSSFGLMKNSRDGKSYSTNLA-----YTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+ G ++S FGL + D + S+ + ++PPE L + +S I+++G ++ ++
Sbjct: 155 DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214
Query: 251 LSGKHIP 257
S +P
Sbjct: 215 YSLGKMP 221
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 5e-15
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 10/186 (5%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G + VA+K +Q P F+ EA + ++H+RLV L + + ++
Sbjct: 29 VWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYRVLFDE 196
+YM N +L L L + +A IA+ + +N H DL A +L +
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSD 144
Query: 197 DGDPRLSSFGLMKNSRDGKSYSTNLA-----YTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+++ FGL + D + + A +T PE + G +S ++S+G +L +++
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 252 SGKHIP 257
+ IP
Sbjct: 205 THGRIP 210
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 7e-15
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 12/179 (6%)
Query: 78 VYRGRLKNNRL-VAIKRF-SRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
V+ GRL+ + VA+K +F+ EA L H +V LIG C + +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189
Query: 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYRVLF 194
V + + L + L + +++ A +++ S+ H DL A L
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARNCLV 246
Query: 195 DEDGDPRLSSFGLMKNSRDGKSYSTNLA------YTPPEFLRTGRVIPESVIYSYGTVL 247
E ++S FG+ + DG ++ +T PE L GR ES ++S+G +L
Sbjct: 247 TEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILL 305
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 1e-13
Identities = 51/284 (17%), Positives = 100/284 (35%), Gaps = 51/284 (17%)
Query: 77 VVYRGRL-----KNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD 131
V R +VA+K+ + F E L +++H +V G C
Sbjct: 56 SVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 115
Query: 132 ER--LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLN 188
R L+ +Y+P +L +L K+ + ++ I + +++ ++ H DL
Sbjct: 116 RRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLA 172
Query: 189 AYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAY------------TPPEFLRTGRVIP 236
+L + + ++ FGL K K Y Y PE L +
Sbjct: 173 TRNILVENENRVKIGDFGLTKVLPQDKEY-----YKVKEPGESPIFWYAPESLTESKFSV 227
Query: 237 ESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE---- 292
S ++S+G VL +L + S + +R ++ + +GQ +L++
Sbjct: 228 ASDVWSFGVVLYELFTYIEKSKSPPAEFMR------MIGNDKQGQMIVFHLIELLKNNGR 281
Query: 293 -------------LASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323
+ ++C RP + L V ++ Q
Sbjct: 282 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 3e-13
Identities = 57/279 (20%), Positives = 104/279 (37%), Gaps = 45/279 (16%)
Query: 78 VYRGRLKN-----NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD 131
V +VA+K + P + E L + H+ ++ GCC +
Sbjct: 47 VSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG 106
Query: 132 ER--LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLN 188
LV +Y+P +L +L + + + A I + + + ++Q+ H DL
Sbjct: 107 AASLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQH--YIHRDLA 161
Query: 189 AYRVLFDEDGDPRLSSFGLMKNSRDGKSY---STN----LAYTPPEFLRTGRVIPESVIY 241
A VL D D ++ FGL K +G Y + + + PE L+ + S ++
Sbjct: 162 ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVW 221
Query: 242 SYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE--------- 292
S+G L +LL +H L + +GQ T+L+E
Sbjct: 222 SFGVTLYELL-------THCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPD 274
Query: 293 --------LASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323
L C + EA RP + L+ + + ++ +
Sbjct: 275 KCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 4e-13
Identities = 50/246 (20%), Positives = 89/246 (36%), Gaps = 19/246 (7%)
Query: 78 VYRGR-LKNNRLVAIK--RFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134
+ ++ R IK SR S + + E A L N++H +V E
Sbjct: 40 AILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLY 99
Query: 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194
+V Y L K + + + I AL H + + + L+ D+ + +
Sbjct: 100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFL 158
Query: 195 DEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSYGTVLLDL 250
+DG +L FG+ + + TP PE +S I++ G VL +L
Sbjct: 159 TKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA---NEDATQLVELASKCLQYEAKDRPD 307
+ K A ++ L+ + G + + L L S+ + +DRP
Sbjct: 219 CTLK--HAFEA------GSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPS 270
Query: 308 VKFLLS 313
V +L
Sbjct: 271 VNSILE 276
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 7e-13
Identities = 41/198 (20%), Positives = 78/198 (39%), Gaps = 21/198 (10%)
Query: 78 VYRGRLKNNRL--------VAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE 129
+++G + V +K + F A+ + + HK LV G C
Sbjct: 24 IFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83
Query: 130 GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLN 188
GDE +LV +++ +L +L +K + ++ VA +A A+ L H ++
Sbjct: 84 GDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEVAKQLAAAMHFLEENT--LIHGNVC 140
Query: 189 AYRVLFDEDGDPR--------LSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVI-PESV 239
A +L + D + LS G+ + + PPE + + + +
Sbjct: 141 AKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATD 200
Query: 240 IYSYGTVLLDLLSGKHIP 257
+S+GT L ++ SG P
Sbjct: 201 KWSFGTTLWEICSGGDKP 218
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 1e-12
Identities = 50/288 (17%), Positives = 99/288 (34%), Gaps = 59/288 (20%)
Query: 77 VVYRGRLK-----NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD 131
V R +VA+K+ + F E L +++H +V G C
Sbjct: 25 SVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 84
Query: 132 ER--LLVAQYMPN----DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH 185
R L+ +Y+P D L KH K+ + ++ I + +++ ++ H
Sbjct: 85 RRNLKLIMEYLPYGSLRDYLQKH-----KERIDHIKLLQYTSQICKGMEYLGTKR--YIH 137
Query: 186 -DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAY------------TPPEFLRTG 232
DL +L + + ++ FGL K K + + PE L
Sbjct: 138 RDLATRNILVENENRVKIGDFGLTKVLPQDKEF-----FKVKEPGESPIFWYAPESLTES 192
Query: 233 RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292
+ S ++S+G VL +L + S + +R ++ + +GQ +L++
Sbjct: 193 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMR------MIGNDKQGQMIVFHLIELLK 246
Query: 293 -----------------LASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323
+ ++C RP + L V ++
Sbjct: 247 NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 2e-12
Identities = 59/284 (20%), Positives = 117/284 (41%), Gaps = 33/284 (11%)
Query: 78 VYRGRLKNNR-----LVAIKRF-SRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD 131
VY+G LK + VAIK + + F+ EA +G H ++ L G ++
Sbjct: 60 VYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK 119
Query: 132 ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAY 190
+++ +YM N L K L D + ++ V + IA + + + N H DL A
Sbjct: 120 PMMIITEYMENGALDKFLREKDGEFSVLQL-VGMLRGIAAGMKYLANMN--YVHRDLAAR 176
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKS--YSTNLA-----YTPPEFLRTGRVIPESVIYSY 243
+L + + ++S FGL + D Y+T+ +T PE + + S ++S+
Sbjct: 177 NILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSF 236
Query: 244 GTVLLDLLSGKHIP-PS-HALDVIRGKNLLLLMDSSLEGQY---ANEDATQLV-ELASKC 297
G V+ ++++ P +V++ ++ + D + +L +C
Sbjct: 237 GIVMWEVMTYGERPYWELSNHEVMK----------AINDGFRLPTPMDCPSAIYQLMMQC 286
Query: 298 LQYEAKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSKAPVVLPT 341
Q E RP ++S + L + + + + + LP+
Sbjct: 287 WQQERARRPKFADIVSILDKLIRAPDSLKTLADFDPRVSIRLPS 330
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 3e-12
Identities = 51/256 (19%), Positives = 90/256 (35%), Gaps = 33/256 (12%)
Query: 77 VVYRGRLKNNRL-----VAIKRF-SRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG 130
VY+G VAIK S + + EA + +V + + L+G C
Sbjct: 30 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGIC-LT 88
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNA 189
L+ Q MP L ++ K + + + IA+ +++ + L H DL A
Sbjct: 89 STVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAA 145
Query: 190 YRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSY 243
VL +++ FGL K + + + E + +S ++SY
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 244 GTVLLDLLSGKHIP-PS-HALDVIRGKNLLLLMDSSLEGQY---ANEDATQLV-ELASKC 297
G + +L++ P A ++ LE T V + KC
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISS----------ILEKGERLPQPPICTIDVYMIMRKC 255
Query: 298 LQYEAKDRPDVKFLLS 313
+A RP + L+
Sbjct: 256 WMIDADSRPKFRELII 271
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 66.8 bits (163), Expect = 7e-12
Identities = 52/263 (19%), Positives = 96/263 (36%), Gaps = 29/263 (11%)
Query: 78 VYRGRLKN----NRLVAIKRF-SRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
V++G + VAIK + S +F+ EA + H +V LIG +
Sbjct: 406 VHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENP 464
Query: 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYR 191
++ + L L K L + AY ++ AL + S+ H D+ A
Sbjct: 465 VWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLESKR--FVHRDIAARN 521
Query: 192 VLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA-----YTPPEFLRTGRVIPESVIYSYGTV 246
VL + +L FGL + D Y + + PE + R S ++ +G
Sbjct: 522 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 581
Query: 247 LLDLLSGKHIP-----PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYE 301
+ ++L P + + I L + + Y L +KC Y+
Sbjct: 582 MWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLY---------SLMTKCWAYD 632
Query: 302 AKDRPDVKFLLSAVAPLQKQTEV 324
RP L + ++ + ++ ++
Sbjct: 633 PSRRPRFTELKAQLSTILEEEKL 655
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 8e-12
Identities = 51/304 (16%), Positives = 105/304 (34%), Gaps = 33/304 (10%)
Query: 77 VVYRGRLKNNRL-----VAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEG 130
V++G V IK +S +G++ H +V L+G C G
Sbjct: 28 TVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC-PG 86
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNA 189
LV QY+P +L H+ + L ++ + IA+ + + + H +L A
Sbjct: 87 SSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQIAKGMYYLEEHG--MVHRNLAA 143
Query: 190 YRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSY 243
VL +++ FG+ + + E + G+ +S ++SY
Sbjct: 144 RNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSY 203
Query: 244 GTVLLDLLS-GKH----IPPSHALDVI-RGKNLLLLMDSSLEGQYANEDATQLVELASKC 297
G + +L++ G + + D++ +G+ L +++ + + KC
Sbjct: 204 GVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTID----------VYMVMVKC 253
Query: 298 LQYEAKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSKAPVVLPTMLSSLGKACARMDLTA 357
+ RP K L + + + + P K ++L
Sbjct: 254 WMIDENIRPTFKELANEFTRMARDPPRYLVIKRESGPGIAPGPEPHGLTNKKLEEVELEP 313
Query: 358 VHDI 361
D+
Sbjct: 314 ELDL 317
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 66.1 bits (161), Expect = 1e-11
Identities = 57/255 (22%), Positives = 100/255 (39%), Gaps = 32/255 (12%)
Query: 77 VVYRGRLKNNR---LVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
V +G + + VAIK + + D + + EA + + + +V LIG C + +
Sbjct: 351 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEA 409
Query: 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYR 191
+LV + L K L ++ +P + + ++ + + +N H +L A
Sbjct: 410 LMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN--FVHRNLAARN 466
Query: 192 VLFDEDGDPRLSSFGLMKNSRDGKSYSTN-------LAYTPPEFLRTGRVIPESVIYSYG 244
VL ++S FGL K SY T L + PE + + S ++SYG
Sbjct: 467 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 526
Query: 245 TVLLDLLSGKHIP-PS-HALDVI----RGKNLLLLMDSSLEGQYANEDATQLVELASKCL 298
+ + LS P +V+ +GK + + E L L S C
Sbjct: 527 VTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPE----------LYALMSDCW 576
Query: 299 QYEAKDRPDVKFLLS 313
Y+ +DRPD +
Sbjct: 577 IYKWEDRPDFLTVEQ 591
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 1e-11
Identities = 45/196 (22%), Positives = 74/196 (37%), Gaps = 31/196 (15%)
Query: 78 VYRGRLKNN---RLVAIKRF-SRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDE 132
V + R+K + AIKR S D F E L + H ++NL+G C
Sbjct: 41 VLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 100
Query: 133 RLLVAQYMPNDTLSKHL--------------FHWDKQPLPWEMRVRVAYYIAQALDHCNS 178
L +Y P+ L L + L + + A +A+ +D+ +
Sbjct: 101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 160
Query: 179 QNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA------YTPPEFLRT 231
++ H DL A +L E+ +++ FGL SR + Y + E L
Sbjct: 161 --KQFIHRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLNY 215
Query: 232 GRVIPESVIYSYGTVL 247
S ++SYG +L
Sbjct: 216 SVYTTNSDVWSYGVLL 231
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 1e-11
Identities = 55/275 (20%), Positives = 96/275 (34%), Gaps = 55/275 (20%)
Query: 78 VYRGRLK-----NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD 131
V R VA+K +S E L N+ H+ +V G C E
Sbjct: 37 VELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96
Query: 132 ER--LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLN 188
L+ +++P+ +L ++L +K + + +++ A I + +D+ S+ H DL
Sbjct: 97 GNGIKLIMEFLPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLA 153
Query: 189 AYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAY------------TPPEFLRTGRVIP 236
A VL + + ++ FGL K K Y Y PE L +
Sbjct: 154 ARNVLVESEHQVKIGDFGLTKAIETDKEY-----YTVKDDRDSPVFWYAPECLMQSKFYI 208
Query: 237 ESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE--- 292
S ++S+G L +LL+ L L M GQ ++
Sbjct: 209 ASDVWSFGVTLHELLTYCDSDSS--------PMALFLKMIGPTHGQMTVTRLVNTLKEGK 260
Query: 293 --------------LASKCLQYEAKDRPDVKFLLS 313
L KC +++ +R + L+
Sbjct: 261 RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 1e-11
Identities = 50/255 (19%), Positives = 96/255 (37%), Gaps = 26/255 (10%)
Query: 77 VVYRGR-LKNNRLVAIK--RFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
+ R + +++ K + + + V+E L ++H +V +
Sbjct: 21 RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNT 80
Query: 134 LL--VAQYMPNDTLSKHL--FHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH---- 185
L V +Y L+ + ++Q L E +RV + AL C+ ++ +
Sbjct: 81 TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHR 140
Query: 186 DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIY 241
DL V D + +L FGL + S++ TP PE + +S I+
Sbjct: 141 DLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIW 200
Query: 242 SYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA---NEDATQLVELASKCL 298
S G +L +L + PP + L EG++ + +L E+ ++ L
Sbjct: 201 SLGCLLYELCALM--PP------FTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRML 252
Query: 299 QYEAKDRPDVKFLLS 313
+ RP V+ +L
Sbjct: 253 NLKDYHRPSVEEILE 267
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 2e-11
Identities = 55/266 (20%), Positives = 102/266 (38%), Gaps = 32/266 (12%)
Query: 78 VYRGRLK----NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
VY G N AIK SR + F+ E + + H ++ LIG +
Sbjct: 37 VYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG 96
Query: 133 RLL-VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAY 190
+ YM + L + + + P ++ + +A+ +++ Q H DL A
Sbjct: 97 LPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-ISFGLQVARGMEYLAEQK--FVHRDLAAR 153
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA--------YTPPEFLRTGRVIPESVIYS 242
+ DE +++ FGL ++ D + YS +T E L+T R +S ++S
Sbjct: 154 NCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWS 213
Query: 243 YGTVLLDLLS-GK----HIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKC 297
+G +L +LL+ G HI P + L + + Y ++ +C
Sbjct: 214 FGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLY---------QVMQQC 264
Query: 298 LQYEAKDRPDVKFLLSAVAPLQKQTE 323
+ + RP + L+ V +
Sbjct: 265 WEADPAVRPTFRVLVGEVEQIVSALL 290
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 2e-11
Identities = 55/287 (19%), Positives = 89/287 (31%), Gaps = 60/287 (20%)
Query: 78 VYRGRLK-----NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
V R LVA+K+ F E L + +V G
Sbjct: 39 VELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98
Query: 133 R--LLVAQYMPN----DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH- 185
+ LV +Y+P+ D L +H + L + + I + +++ S+ H
Sbjct: 99 QSLRLVMEYLPSGCLRDFLQRH-----RARLDASRLLLYSSQICKGMEYLGSRR--CVHR 151
Query: 186 DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAY------------TPPEFLRTGR 233
DL A +L + + +++ FGL K K Y Y PE L
Sbjct: 152 DLAARNILVESEAHVKIADFGLAKLLPLDKDY-----YVVREPGQSPIFWYAPESLSDNI 206
Query: 234 VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE- 292
+S ++S+G VL +L + S L M A +L+E
Sbjct: 207 FSRQSDVWSFGVVLYELFTYCDKSCS-------PSAEFLRMMGCERDVPALSRLLELLEE 259
Query: 293 ----------------LASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323
L C +DRP L + L +
Sbjct: 260 GQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 3e-11
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 18/185 (9%)
Query: 78 VYRGRLKNNR----LVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
VY G L +N A+K +R + QF+TE + + H +++L+G C +
Sbjct: 41 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100
Query: 133 -RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAY 190
L+V YM + L + + P ++ + +A+ + + S+ K H DL A
Sbjct: 101 SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK--KFVHRDLAAR 157
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAY--------TPPEFLRTGRVIPESVIYS 242
+ DE +++ FGL ++ D + YS + E L+T + +S ++S
Sbjct: 158 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 217
Query: 243 YGTVL 247
+G +L
Sbjct: 218 FGVLL 222
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 3e-11
Identities = 56/283 (19%), Positives = 101/283 (35%), Gaps = 51/283 (18%)
Query: 78 VYRGRLKNN----RLVAIK--RFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD 131
V +LK VA+K + + D +F+ EAA + H + L+G
Sbjct: 39 VREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98
Query: 132 ER------LLVAQYMPN----DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNR 181
+ +++ +M + L + LP + VR IA +++ +S+
Sbjct: 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR-- 156
Query: 182 KLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAY------------TPPEF 228
H DL A + ED ++ FGL SR YS + Y E
Sbjct: 157 NFIHRDLAARNCMLAEDMTVCVADFGL---SRK--IYSGD-YYRQGCASKLPVKWLALES 210
Query: 229 LRTGRVIPESVIYSYGTVLLDLLS-GK----HIPPSHALDVIRGKNLLLLMDSSLEGQYA 283
L S ++++G + ++++ G+ I + + + G N L +E Y
Sbjct: 211 LADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVY- 269
Query: 284 NEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVAS 326
+L +C + K RP L + + V S
Sbjct: 270 --------DLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS 304
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 3e-11
Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 24/192 (12%)
Query: 78 VYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG 130
VY G K VAIK + S + +F+ EA+ + +V L+G ++G
Sbjct: 41 VYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100
Query: 131 DERLLVAQYMPNDTLSKHL--------FHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRK 182
L++ + M L +L + P +++A IA + + N+ K
Sbjct: 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA--NK 158
Query: 183 LYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA------YTPPEFLRTGRVI 235
H DL A + ED ++ FG+ ++ + Y + PE L+ G
Sbjct: 159 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 218
Query: 236 PESVIYSYGTVL 247
S ++S+G VL
Sbjct: 219 TYSDVWSFGVVL 230
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 3e-11
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 24/188 (12%)
Query: 78 VYRGRLKNNR----LVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
VY G L +N A+K +R + QF+TE + + H +++L+G C +
Sbjct: 105 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 164
Query: 133 -RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAY 190
L+V YM + L + + P ++ + +A+ + S+ K H DL A
Sbjct: 165 SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFLASK--KFVHRDLAAR 221
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAY-----------TPPEFLRTGRVIPESV 239
+ DE +++ FGL +RD + + E L+T + +S
Sbjct: 222 NCMLDEKFTVKVADFGL---ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 278
Query: 240 IYSYGTVL 247
++S+G +L
Sbjct: 279 VWSFGVLL 286
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 4e-11
Identities = 53/251 (21%), Positives = 99/251 (39%), Gaps = 23/251 (9%)
Query: 78 VYRGR-LKNNRLVAIKRFSRQSWPDP---HQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
VYR L + VA+K+ D + E L + H ++ E +E
Sbjct: 48 VYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL 107
Query: 134 LLVAQYMPNDTLSKHL--FHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAY 190
+V + LS+ + F K+ +P + + AL+H +S R++ H D+
Sbjct: 108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS--RRVMHRDIKPA 165
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSYGTV 246
V G +L GL + + + +L TP PE + +S I+S G +
Sbjct: 166 NVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCL 225
Query: 247 LLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA----NEDATQLVELASKCLQYEA 302
L ++ + + P + NL L + Y + + +L +L + C+ +
Sbjct: 226 LYEMAALQ--SPFYG----DKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDP 279
Query: 303 KDRPDVKFLLS 313
+ RPDV ++
Sbjct: 280 EKRPDVTYVYD 290
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 4e-11
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 18/194 (9%)
Query: 78 VYRGRLK----NNRLVAIKRF-SRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
V GRLK VAIK + F+ EA+ +G H ++ L G +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLY-H-DLNAY 190
++V +YM N +L L D Q ++ V + IA + + + Y H DL A
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIASGMKYLSDMG---YVHRDLAAR 176
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKS--YSTNLA-----YTPPEFLRTGRVIPESVIYSY 243
+L + + ++S FGL + D Y+T +T PE + + S ++SY
Sbjct: 177 NILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
Query: 244 GTVLLDLLSGKHIP 257
G VL +++S P
Sbjct: 237 GIVLWEVMSYGERP 250
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 4e-11
Identities = 44/202 (21%), Positives = 67/202 (33%), Gaps = 44/202 (21%)
Query: 78 VYRGRLKNNR------LVAIK----RFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCC 127
VY G++ VA+K S Q D F+ EA + H+ +V IG
Sbjct: 46 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD---FLMEALIISKFNHQNIVRCIGVS 102
Query: 128 AEGDERLLVAQYMPNDTLSKHL-----FHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRK 182
+ R ++ + M L L L + VA IA +
Sbjct: 103 LQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE--NH 160
Query: 183 LYH-DLNAYRVLFDEDGDPRL---SSFGLMKNSRDGKSYSTNLAY-------------TP 225
H D+ A L G R+ FG+ +RD Y + Y P
Sbjct: 161 FIHRDIAARNCLLTCPGPGRVAKIGDFGM---ARD--IYRAS--YYRKGGCAMLPVKWMP 213
Query: 226 PEFLRTGRVIPESVIYSYGTVL 247
PE G ++ +S+G +L
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLL 235
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 5e-11
Identities = 43/253 (16%), Positives = 92/253 (36%), Gaps = 31/253 (12%)
Query: 78 VYRGR-LKNNRLVAIKRFSRQSWPDPH--QFVTEAAGLGNVRHKRLVNLIGCC---AEGD 131
VY+G + VA + +F EA L ++H +V +G
Sbjct: 42 VYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK 101
Query: 132 ERL-LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNA 189
+ + LV + M + TL +L + + ++ I + L +++ + H DL
Sbjct: 102 KCIVLVTELMTSGTLKTYL--KRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKC 159
Query: 190 YRVLFD-EDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESV-IYSY 243
+ G ++ GL R + + + TP PE ESV +Y++
Sbjct: 160 DNIFITGPTGSVKIGDLGLATLKRASFAKA--VIGTPEFMAPEMYEEK--YDESVDVYAF 215
Query: 244 GTVLLDLLSGKH----IPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299
G +L++ + ++ + + + + + +++E C++
Sbjct: 216 GMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVA----IPEVKEIIE---GCIR 268
Query: 300 YEAKDRPDVKFLL 312
+R +K LL
Sbjct: 269 QNKDERYSIKDLL 281
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 6e-11
Identities = 52/256 (20%), Positives = 97/256 (37%), Gaps = 33/256 (12%)
Query: 77 VVYRGRL-----KNNRLVAIKRF-SRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG 130
VY+G K VAIK S + + EA + +V + + L+G C
Sbjct: 30 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGIC-LT 88
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNA 189
L+ Q MP L ++ K + + + IA+ +++ + L H DL A
Sbjct: 89 STVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAA 145
Query: 190 YRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSY 243
VL +++ FGL K + + + E + +S ++SY
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 244 GTVLLDLLS-GKH----IPPSHALDVI-RGKNLLLLMDSSLEGQYANEDATQLVELASKC 297
G + +L++ G IP S ++ +G+ L +++ + + KC
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID----------VYMIMVKC 255
Query: 298 LQYEAKDRPDVKFLLS 313
+A RP + L+
Sbjct: 256 WMIDADSRPKFRELII 271
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 6e-11
Identities = 43/197 (21%), Positives = 73/197 (37%), Gaps = 29/197 (14%)
Query: 78 VYRGRLKN------NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD 131
V+ N LVA+K + F EA L N++H+ +V G C +GD
Sbjct: 31 VFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 90
Query: 132 ERLLVAQYMPN--------------DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCN 177
++V +YM + L K L + +A IA + +
Sbjct: 91 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA 150
Query: 178 SQNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA------YTPPEFLR 230
SQ+ H DL L + ++ FG+ ++ Y + PPE +
Sbjct: 151 SQH--FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM 208
Query: 231 TGRVIPESVIYSYGTVL 247
+ ES ++S+G +L
Sbjct: 209 YRKFTTESDVWSFGVIL 225
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 7e-11
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 18/185 (9%)
Query: 77 VVYRGRLK----NNRLVAIKRF-SRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD 131
V GRL+ + VAIK + + F++EA+ +G H ++ L G G
Sbjct: 64 EVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR 123
Query: 132 ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLY-H-DLNA 189
++V +YM N +L L D Q ++ V + + + + + Y H DL A
Sbjct: 124 LAMIVTEYMENGSLDTFLRTHDGQFTIMQL-VGMLRGVGAGMRYLSDLG---YVHRDLAA 179
Query: 190 YRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA-------YTPPEFLRTGRVIPESVIYS 242
VL D + ++S FGL + D + +T PE + S ++S
Sbjct: 180 RNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWS 239
Query: 243 YGTVL 247
+G V+
Sbjct: 240 FGVVM 244
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 9e-11
Identities = 44/202 (21%), Positives = 66/202 (32%), Gaps = 44/202 (21%)
Query: 78 VYRGRLKNNR------LVAIK----RFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCC 127
VY G++ VA+K S Q D F+ EA + H+ +V IG
Sbjct: 87 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD---FLMEALIISKFNHQNIVRCIGVS 143
Query: 128 AEGDERLLVAQYMPNDTLSKHL-----FHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRK 182
+ R ++ + M L L L + VA IA +
Sbjct: 144 LQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN--H 201
Query: 183 LYH-DLNAYRVLFDEDGDPRL---SSFGLMKNSRDGKSYSTNLAY-------------TP 225
H D+ A L G R+ FG+ +RD Y Y P
Sbjct: 202 FIHRDIAARNCLLTCPGPGRVAKIGDFGM---ARD--IYRAG--YYRKGGCAMLPVKWMP 254
Query: 226 PEFLRTGRVIPESVIYSYGTVL 247
PE G ++ +S+G +L
Sbjct: 255 PEAFMEGIFTSKTDTWSFGVLL 276
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 2e-10
Identities = 53/271 (19%), Positives = 100/271 (36%), Gaps = 39/271 (14%)
Query: 78 VYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE----GDE 132
V L + A+KR D + EA H ++ L+ C E
Sbjct: 45 VDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104
Query: 133 RLLVAQYMPNDTLSKHL--FHWDKQPLPWEMRV-RVAYYIAQALDHCNSQNRKLYH-DLN 188
L+ + TL + L E ++ + I + L+ ++ + H DL
Sbjct: 105 AWLLLPFFKRGTLWNEIERLKDKGNFLT-EDQILWLLLGICRGLEAIHA--KGYAHRDLK 161
Query: 189 AYRVLFDEDGDPRLSSFGLMKNSR-------------DGKSYSTNLAYTPPEF--LRTGR 233
+L ++G P L G M + D + ++Y PE +++
Sbjct: 162 PTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHC 221
Query: 234 VIPESV-IYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLE----GQYANEDAT 288
VI E ++S G VL ++ G+ P + +G ++ L + + L ++ +
Sbjct: 222 VIDERTDVWSLGCVLYAMMFGEG--PYDMVF-QKGDSVALAVQNQLSIPQSPRH-SSALW 277
Query: 289 QLVELASKCLQYEAKDRPDVKFLLSAVAPLQ 319
QL+ + + + RP + LLS + LQ
Sbjct: 278 QLL---NSMMTVDPHQRPHIPLLLSQLEALQ 305
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 2e-10
Identities = 50/203 (24%), Positives = 75/203 (36%), Gaps = 42/203 (20%)
Query: 78 VYRGRLKN------NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD 131
V+ N LVA+K S F EA L ++H+ +V G C EG
Sbjct: 57 VFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116
Query: 132 ERLLVAQYMPNDTLSKHL-------------FHWDKQPLPWEMRVRVAYYIAQALDHCNS 178
L+V +YM + L++ L PL + VA +A + +
Sbjct: 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG 176
Query: 179 QNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAY-------------T 224
H DL L + ++ FG+ SRD YST+ Y
Sbjct: 177 L--HFVHRDLATRNCLVGQGLVVKIGDFGM---SRD--IYSTD--YYRVGGRTMLPIRWM 227
Query: 225 PPEFLRTGRVIPESVIYSYGTVL 247
PPE + + ES ++S+G VL
Sbjct: 228 PPESILYRKFTTESDVWSFGVVL 250
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 2e-10
Identities = 38/198 (19%), Positives = 78/198 (39%), Gaps = 36/198 (18%)
Query: 78 VYRGRLKN----NRLVAIK--RFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD 131
V G LK + VA+K + S + +F++EAA + + H ++ L+G C E
Sbjct: 50 VMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109
Query: 132 -----ERLLVAQYMPN----DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRK 182
+ +++ +M L + +P + ++ IA +++ +++
Sbjct: 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR--N 167
Query: 183 LYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAY------------TPPEFL 229
H DL A + +D ++ FGL S+ YS + Y E L
Sbjct: 168 FLHRDLAARNCMLRDDMTVCVADFGL---SKK--IYSGD-YYRQGRIAKMPVKWIAIESL 221
Query: 230 RTGRVIPESVIYSYGTVL 247
+S ++++G +
Sbjct: 222 ADRVYTSKSDVWAFGVTM 239
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 3e-10
Identities = 46/192 (23%), Positives = 76/192 (39%), Gaps = 16/192 (8%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPDPH---QFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
VY N VAIK +F E + H+ +V++I E D
Sbjct: 26 TVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDC 85
Query: 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYR 191
LV +Y+ TLS+++ PL + + I + H + + ++ H D+
Sbjct: 86 YYLVMEYIEGPTLSEYIE--SHGPLSVDTAINFTNQILDGIKH--AHDMRIVHRDIKPQN 141
Query: 192 VLFDEDGDPRLSSFGLMKNSRDGKSYSTNL-----AYTPPEFLRTGRVIPESVIYSYGTV 246
+L D + ++ FG+ K + TN Y PE + + IYS G V
Sbjct: 142 ILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIV 201
Query: 247 LLDLLSGKHIPP 258
L ++L G+ PP
Sbjct: 202 LYEMLVGE--PP 211
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 4e-10
Identities = 45/193 (23%), Positives = 79/193 (40%), Gaps = 16/193 (8%)
Query: 77 VVYRGRLKNNR---LVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
V +G + + VAIK + + D + + EA + + + +V LIG C + +
Sbjct: 25 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEA 83
Query: 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYR 191
+LV + L K L ++ +P + + ++ + + +N H DL A
Sbjct: 84 LMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN--FVHRDLAARN 140
Query: 192 VLFDEDGDPRLSSFGLMKNSRDGKSYSTN-------LAYTPPEFLRTGRVIPESVIYSYG 244
VL ++S FGL K SY T L + PE + + S ++SYG
Sbjct: 141 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 200
Query: 245 TVLLDLLSGKHIP 257
+ + LS P
Sbjct: 201 VTMWEALSYGQKP 213
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 4e-10
Identities = 51/265 (19%), Positives = 94/265 (35%), Gaps = 33/265 (12%)
Query: 77 VVYRGRLKN----NRLVAIKRFSRQSWPDPHQ--FVTEAAGLGNVRHKRLVNLIGCCAEG 130
V++G + VAIK + D + F+ EA + H +V LIG
Sbjct: 30 DVHQGIYMSPENPALAVAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TE 87
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNA 189
+ ++ + L L + + AY ++ AL + S+ H D+ A
Sbjct: 88 NPVWIIMELCTLGELRSFLQVRKYSLDLASL-ILYAYQLSTALAYLESKR--FVHRDIAA 144
Query: 190 YRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA-----YTPPEFLRTGRVIPESVIYSYG 244
VL + +L FGL + D Y + + PE + R S ++ +G
Sbjct: 145 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG 204
Query: 245 TVLLDLLSGKHIP-PS-HALDVIRGKNLLLLMDSSLEGQY---ANEDATQLV-ELASKCL 298
+ ++L P DVI +E + + L +KC
Sbjct: 205 VCMWEILMHGVKPFQGVKNNDVIG----------RIENGERLPMPPNCPPTLYSLMTKCW 254
Query: 299 QYEAKDRPDVKFLLSAVAPLQKQTE 323
Y+ RP L + ++ + ++ +
Sbjct: 255 AYDPSRRPRFTELKAQLSTILEEEK 279
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 7e-10
Identities = 45/257 (17%), Positives = 94/257 (36%), Gaps = 37/257 (14%)
Query: 78 VYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL-- 134
V++ + + + IKR + + E L + H +V+ GC D
Sbjct: 27 VFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82
Query: 135 --------------LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQN 180
+ ++ TL + + + L + + + I + +D+ +S
Sbjct: 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS-- 140
Query: 181 RKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN---LAYTPPEFLRTGRVIP 236
+KL + DL + + ++ FGL+ + ++ + + L Y PE + +
Sbjct: 141 KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGK 200
Query: 237 ESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296
E +Y+ G +L +LL A + K L D + + + L K
Sbjct: 201 EVDLYALGLILAELLH----VCDTAFE--TSKFFTDLRDGIISDIFDKK----EKTLLQK 250
Query: 297 CLQYEAKDRPDVKFLLS 313
L + +DRP+ +L
Sbjct: 251 LLSKKPEDRPNTSEILR 267
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 59.7 bits (144), Expect = 7e-10
Identities = 31/274 (11%), Positives = 64/274 (23%), Gaps = 49/274 (17%)
Query: 77 VVYRGR-LKNNRLVAIKRF---SRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCC----- 127
VV+ R ++ A+K F + S + + + +
Sbjct: 77 VVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLP 136
Query: 128 -----AEGDERLLVAQYMPNDTLSKHLFHW--------------------DKQPLPWEMR 162
+ +D + +
Sbjct: 137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILAL 196
Query: 163 VRVAYYIAQALDHCNSQNRKLYH-DL---NAYRVLFDEDGDPRLSSFGL-MKNSRDGKSY 217
+ + + + S+ L H N + DG L K G +
Sbjct: 197 HILTAQLIRLAANLQSKG--LVHGHFTPDN---LFIMPDGRLMLGDVSALWKVGTRGPAS 251
Query: 218 STNLAYTPPEFL--RTGRVIPESVIYSYGTVLLDLLSGK---HIPPSHALDVIRGKNLLL 272
S + Y P EFL T + G + + + + +L +
Sbjct: 252 SVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRV 311
Query: 273 LMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306
SL + L + L ++ + R
Sbjct: 312 PGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRL 345
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 58.7 bits (143), Expect = 8e-10
Identities = 38/182 (20%), Positives = 72/182 (39%), Gaps = 15/182 (8%)
Query: 77 VVYRGRLKNNRL----VAIKRFSR-QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD 131
VY G N++ VA+K + + + +F++EA + N+ H +V LIG E +
Sbjct: 27 EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGII-EEE 85
Query: 132 ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAY 190
++ + P L +L + V + I +A+ + S N H D+
Sbjct: 86 PTWIIMELYPYGELGHYLERNKNSLKVLTL-VLYSLQICKAMAYLESIN--CVHRDIAVR 142
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA-----YTPPEFLRTGRVIPESVIYSYGT 245
+L +L FGL + D Y ++ + PE + R S ++ +
Sbjct: 143 NILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAV 202
Query: 246 VL 247
+
Sbjct: 203 CM 204
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 1e-09
Identities = 52/249 (20%), Positives = 90/249 (36%), Gaps = 30/249 (12%)
Query: 78 VYRGRLK-NNRLVAIK--RFSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDER 133
V++ R K + RL A+K + D + + E V +H V L EG
Sbjct: 73 VFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGIL 132
Query: 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR-VAYYIAQALDHCNSQNRKLYHDLNAYRV 192
L + L +H W LP E +V AL H +SQ ++ D+ +
Sbjct: 133 YLQTELCGPS-LQQHCEAW-GASLP-EAQVWGYLRDTLLALAHLHSQG-LVHLDVKPANI 188
Query: 193 LFDEDGDPRLSSFGLMK--------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYG 244
G +L FGL+ ++G Y PE L+ + ++S G
Sbjct: 189 FLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR-----YMAPELLQGSYG-TAADVFSLG 242
Query: 245 TVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKD 304
+L++ P G+ L L ++ +++L + L+ + K
Sbjct: 243 LTILEVACNME-LPHG------GEGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKL 295
Query: 305 RPDVKFLLS 313
R + LL+
Sbjct: 296 RATAEALLA 304
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 2e-09
Identities = 50/290 (17%), Positives = 94/290 (32%), Gaps = 43/290 (14%)
Query: 78 VYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136
V + R ++R AIK+ ++E L ++ H+ +V E +
Sbjct: 22 VVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP 80
Query: 137 AQYMPNDT--------LSKH-LFHW-DKQPLPWEMRVRVAYYIAQ---ALDHCNSQNRKL 183
+ + L+ + L + R Q AL + +SQ +
Sbjct: 81 MTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQ-RDEYWRLFRQILEALSYIHSQG--I 137
Query: 184 YH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA------------------YT 224
H DL + DE + ++ FGL KN + Y
Sbjct: 138 IHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYV 197
Query: 225 PPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA 283
E L E + +YS G + +++ P S ++ + L + +
Sbjct: 198 ATEVLDGTGHYNEKIDMYSLGIIFFEMIY----PFSTGMERVNILKKLRSVSIEFPPDFD 253
Query: 284 NEDATQLVELASKCLQYEAKDRPDVKFLL-SAVAPLQKQTEVASHVLMGL 332
+ ++ + ++ RP + LL S P++ Q EV L L
Sbjct: 254 DNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVIKEALKSL 303
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 2e-09
Identities = 36/184 (19%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 77 VVYRGRLKNNRL---VAIK--RFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD 131
V +G + ++ VA+K + + + EA + + + +V +IG C E +
Sbjct: 32 TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE 90
Query: 132 ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAY 190
+LV + L+K+L + + + + + + ++ + + N H DL A
Sbjct: 91 SWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAAR 146
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN-------LAYTPPEFLRTGRVIPESVIYSY 243
VL ++S FGL K R ++Y + + PE + + +S ++S+
Sbjct: 147 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 206
Query: 244 GTVL 247
G ++
Sbjct: 207 GVLM 210
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 2e-09
Identities = 52/280 (18%), Positives = 92/280 (32%), Gaps = 44/280 (15%)
Query: 78 VYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDER-- 133
VY + + + R A+KR + E + + H +V + G E
Sbjct: 44 VYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103
Query: 134 ------LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-D 186
LL+ + + + PL + +++ Y +A+ H + Q + H D
Sbjct: 104 TGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRD 163
Query: 187 LNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN----------------LAYTPPEF-- 228
L +L G +L FG YS + Y PE
Sbjct: 164 LKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIID 223
Query: 229 LRTGRVIPESV-IYSYGTVLLDLLSGKHIPP---SHALDVIRGKNLLLLMDSSLEGQYAN 284
L + I E I++ G +L L +H P L ++ GK + D+ QY
Sbjct: 224 LYSNFPIGEKQDIWALGCILYLLCFRQH--PFEDGAKLRIVNGKYSIPPHDT----QYT- 276
Query: 285 EDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEV 324
L LQ ++R + ++ + + V
Sbjct: 277 ----VFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNV 312
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 2e-09
Identities = 51/272 (18%), Positives = 95/272 (34%), Gaps = 39/272 (14%)
Query: 77 VVYRGRLK----NNRLVAIKRFSRQSWPDPHQ---FVTEAAGLGNVRHKRLVNLIGCCAE 129
VV RG VA+K P F+ E + ++ H+ L+ L G
Sbjct: 33 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVV-L 91
Query: 130 GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLN 188
+V + P +L L + R A +A+ + + S+ H DL
Sbjct: 92 TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLA 148
Query: 189 AYRVLFDEDGDPRLSSFGLMKN-SRDGKSYSTN------LAYTPPEFLRTGRVIPESVIY 241
A +L ++ FGLM+ ++ Y A+ PE L+T S +
Sbjct: 149 ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTW 208
Query: 242 SYGTVLLDLLSGKHIP-PS-HALDVIRGKNLLLLMDSSLEGQ----YANEDATQLV-ELA 294
+G L ++ + P + ++ ++ + ED Q + +
Sbjct: 209 MFGVTLWEMFTYGQEPWIGLNGSQILH----------KIDKEGERLPRPEDCPQDIYNVM 258
Query: 295 SKCLQYEAKDRP---DVKFLLSAVAPLQKQTE 323
+C ++ +DRP ++ L P + E
Sbjct: 259 VQCWAHKPEDRPTFVALRDFLLEAQPTDMRAE 290
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 3e-09
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 21/192 (10%)
Query: 78 VYRGR-LKNNRLVAIKRFSRQSWPDP---HQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
VY R ++ ++A+K + HQ E ++RH ++ L G +
Sbjct: 25 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRV 84
Query: 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQNRKLYH-DLNA 189
L+ +Y P T+ + L E R YI + AL +C+S +++ H D+
Sbjct: 85 YLILEYAPLGTVYRELQK--LSKFD-EQRTA--TYITELANALSYCHS--KRVIHRDIKP 137
Query: 190 YRVLFDEDGDPRLSSFGLMKNSRDGKSYST--NLAYTPPEFLRTGRVIPESV-IYSYGTV 246
+L G+ +++ FG ++ + L Y PPE + GR+ E V ++S G +
Sbjct: 138 ENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVL 196
Query: 247 LLDLLSGKHIPP 258
+ L GK PP
Sbjct: 197 CYEFLVGK--PP 206
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 4e-09
Identities = 46/212 (21%), Positives = 76/212 (35%), Gaps = 50/212 (23%)
Query: 78 VYRGRLKN------NRLVAIKRF-SRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG 130
V + + VA+K S + ++E L V H ++ L G C++
Sbjct: 39 VVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98
Query: 131 DERLLVAQYMPNDTLSKHL----------------------FHWDKQPLPWEMRVRVAYY 168
LL+ +Y +L L H D++ L + A+
Sbjct: 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQ 158
Query: 169 IAQALDHCNSQNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAY---- 223
I+Q + + KL H DL A +L E ++S FGL SRD Y + +Y
Sbjct: 159 ISQGMQYLAE--MKLVHRDLAARNILVAEGRKMKISDFGL---SRD--VYEED-SYVKRS 210
Query: 224 --------TPPEFLRTGRVIPESVIYSYGTVL 247
E L +S ++S+G +L
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 4e-09
Identities = 50/249 (20%), Positives = 87/249 (34%), Gaps = 35/249 (14%)
Query: 78 VYRGR-LKNNRLVAIKRFSRQSWPDP---HQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
+ + A K + P + E + ++ H+ +V G + D
Sbjct: 31 CFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFV 90
Query: 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQNRKLYH-DLNA 189
+V + +L + ++ L E R YY+ Q + + ++ H DL
Sbjct: 91 FVVLELCRRRSLLELHKR--RKALT-EPEAR--YYLRQIVLGCQYLHR--NRVIHRDLKL 143
Query: 190 YRVLFDEDGDPRLSSFGL-MKNSRDGKSYSTN---LAYTPPEFLRTGRVIPESVIYSYGT 245
+ +ED + ++ FGL K DG+ Y PE L E ++S G
Sbjct: 144 GNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGC 203
Query: 246 VLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA-----NEDATQLVELASKCLQY 300
++ LL GK PP L + +Y+ N A L+ K LQ
Sbjct: 204 IMYTLLVGK--PPFET------SCLKETYLRIKKNEYSIPKHINPVAASLI---QKMLQT 252
Query: 301 EAKDRPDVK 309
+ RP +
Sbjct: 253 DPTARPTIN 261
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 4e-09
Identities = 50/249 (20%), Positives = 87/249 (34%), Gaps = 35/249 (14%)
Query: 78 VYRGR-LKNNRLVAIKRFSRQSWPDP---HQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
+ + A K + P + E + ++ H+ +V G + D
Sbjct: 57 CFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFV 116
Query: 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQNRKLYH-DLNA 189
+V + +L + ++ L E R YY+ Q + + ++ H DL
Sbjct: 117 FVVLELCRRRSLLELHKR--RKALT-EPEAR--YYLRQIVLGCQYLHR--NRVIHRDLKL 169
Query: 190 YRVLFDEDGDPRLSSFGL-MKNSRDGKSYST---NLAYTPPEFLRTGRVIPESVIYSYGT 245
+ +ED + ++ FGL K DG+ Y PE L E ++S G
Sbjct: 170 GNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGC 229
Query: 246 VLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA-----NEDATQLVELASKCLQY 300
++ LL GK PP L + +Y+ N A L+ K LQ
Sbjct: 230 IMYTLLVGK--PPFET------SCLKETYLRIKKNEYSIPKHINPVAASLI---QKMLQT 278
Query: 301 EAKDRPDVK 309
+ RP +
Sbjct: 279 DPTARPTIN 287
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 57.3 bits (138), Expect = 4e-09
Identities = 34/281 (12%), Positives = 66/281 (23%), Gaps = 67/281 (23%)
Query: 77 VVYRGR-LKNNRLVAIK---RFSRQSWPDPHQFVTEAAGLGNVR---------------- 116
+ + R Q E L +R
Sbjct: 88 AYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIF 147
Query: 117 ---------HKRLVNLIGCCAEGDERLLVAQYM----PNDTLSKHLFHWDKQ--PLPWEM 161
K+++ + + Y T + L L
Sbjct: 148 PFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHA 207
Query: 162 RVRVAYYIAQALDHCNSQNRKLYH-DL---NAYRVLFDEDGDPRLSSFGLMKNSRDGKSY 217
R+++ + + L + L H L + ++ D+ G L+ F +
Sbjct: 208 RLQLTLQVIRLLASLHHYG--LVHTYLRPVD---IVLDQRGGVFLTGFEHLVRDGARVVS 262
Query: 218 STNLAYTPPEFLRTGRVIPESV-----------IYSYGTVLLDLLSGKHIPPSHALDVIR 266
S + + PPE I ++ G V+ + P I
Sbjct: 263 SVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD--LP------IT 314
Query: 267 GKNLLLLMDSSLEGQYA-NEDATQLVELASKCLQYEAKDRP 306
L + + L+ L+Y +DR
Sbjct: 315 KDAALGGSEWIFRSCKNIPQPVRALL---EGFLRYPKEDRL 352
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 7e-09
Identities = 41/207 (19%), Positives = 80/207 (38%), Gaps = 45/207 (21%)
Query: 78 VYRGRL--------KNNRLVAIKRF-SRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCC 127
V K VA+K + D V+E + + +HK ++NL+G C
Sbjct: 51 VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110
Query: 128 AEGDERLLVAQYMPNDTLSKHL--------------FHWDKQPLPWEMRVRVAYYIAQAL 173
+ ++ +Y L ++L ++ + ++ V Y +A+ +
Sbjct: 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 170
Query: 174 DHCNSQNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAY--------- 223
++ S +K H DL A VL E+ +++ FGL +RD + + Y
Sbjct: 171 EYLAS--QKCIHRDLAARNVLVTENNVMKIADFGL---ARD--INNID-YYKKTTNGRLP 222
Query: 224 ---TPPEFLRTGRVIPESVIYSYGTVL 247
PE L +S ++S+G ++
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLM 249
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 7e-09
Identities = 42/192 (21%), Positives = 80/192 (41%), Gaps = 21/192 (10%)
Query: 78 VYRGR-LKNNRLVAIKRFSR---QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
VY R +N ++A+K + + HQ E ++RH ++ + +
Sbjct: 30 VYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRI 89
Query: 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQNRKLYH-DLNA 189
L+ ++ P L K L + R A ++ + AL +C+ RK+ H D+
Sbjct: 90 YLMLEFAPRGELYKELQKHGRFDEQ-----RSATFMEELADALHYCHE--RKVIHRDIKP 142
Query: 190 YRVLFDEDGDPRLSSFGLMKNSRDGKSYST--NLAYTPPEFLRTGRVIPESV-IYSYGTV 246
+L G+ +++ FG ++ + + L Y PPE + G+ E V ++ G +
Sbjct: 143 ENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIE-GKTHDEKVDLWCAGVL 201
Query: 247 LLDLLSGKHIPP 258
+ L G PP
Sbjct: 202 CYEFLVGM--PP 211
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 7e-09
Identities = 47/194 (24%), Positives = 70/194 (36%), Gaps = 22/194 (11%)
Query: 78 VYRGR-LKNNRLVAIKRFSRQSWPDPH---QFVTEAAGLGNVRHKRLVNL--IGCCAEGD 131
VY R+VA+K S DP + EA G ++ +V + G E D
Sbjct: 50 VYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFG---EID 106
Query: 132 ERL-LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNA 189
+L + + + L+ L + PL V + I ALD + H D+
Sbjct: 107 GQLYVDMRLINGVDLAAMLR--RQGPLAPPRAVAIVRQIGSALDA--AHAAGATHRDVKP 162
Query: 190 YRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN-----LAYTPPEFLRTGRVIPESVIYSYG 244
+L D L FG+ + D K L Y PE + IY+
Sbjct: 163 ENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALT 222
Query: 245 TVLLDLLSGKHIPP 258
VL + L+G PP
Sbjct: 223 CVLYECLTGS--PP 234
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 56.3 bits (136), Expect = 9e-09
Identities = 49/263 (18%), Positives = 88/263 (33%), Gaps = 45/263 (17%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLL 135
+VYRG +NR VA+KR + + + E L H ++ + + +
Sbjct: 40 IVYRGM-FDNRDVAVKRILPECFSFADR---EVQLLRESDEHPNVIRYFCTEKDRQFQYI 95
Query: 136 VAQYMP----NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAY 190
+ K H +P+ + L H +S N + H DL +
Sbjct: 96 AIELCAATLQEYVEQKDFAHLGLEPI------TLLQQTTSGLAHLHSLN--IVHRDLKPH 147
Query: 191 RVLFDEDGD-----PRLSSFGLMKNSRDGKSYSTNLA-------YTPPEFLR---TGRVI 235
+L +S FGL K G+ + + + PE L
Sbjct: 148 NILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPT 207
Query: 236 PESVIYSYGTVLLDLLSGKHIP-----PSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290
I+S G V ++S P A ++ +L L ++ + A +L
Sbjct: 208 YTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPE----KHEDVIAREL 263
Query: 291 VELASKCLQYEAKDRPDVKFLLS 313
+ K + + + RP K +L
Sbjct: 264 I---EKMIAMDPQKRPSAKHVLK 283
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 55.3 bits (134), Expect = 1e-08
Identities = 44/198 (22%), Positives = 73/198 (36%), Gaps = 30/198 (15%)
Query: 78 VYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG 130
VY+G L + VAIK + P +F EA ++H +V L+G +
Sbjct: 25 VYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD 84
Query: 131 DERLLVAQYMPN--------------DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHC 176
++ Y + D S K L V + IA +++
Sbjct: 85 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL 144
Query: 177 NSQNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA------YTPPEFL 229
+S + + H DL VL + + ++S GL + Y + PE +
Sbjct: 145 SSHH--VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAI 202
Query: 230 RTGRVIPESVIYSYGTVL 247
G+ +S I+SYG VL
Sbjct: 203 MYGKFSIDSDIWSYGVVL 220
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 1e-08
Identities = 45/207 (21%), Positives = 81/207 (39%), Gaps = 45/207 (21%)
Query: 78 VYRGRLKN--------NRLVAIKRF-SRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCC 127
V VA+K S + D ++E + + +HK ++NL+G C
Sbjct: 85 VVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144
Query: 128 AEGDERLLVAQYMPNDTLSKHL--------------FHWDKQPLPWEMRVRVAYYIAQAL 173
+ ++ +Y L ++L H ++ L + V AY +A+ +
Sbjct: 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGM 204
Query: 174 DHCNSQNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAY--------- 223
++ S +K H DL A VL ED +++ FGL +RD + + Y
Sbjct: 205 EYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGL---ARD--IHHID-YYKKTTNGRLP 256
Query: 224 ---TPPEFLRTGRVIPESVIYSYGTVL 247
PE L +S ++S+G +L
Sbjct: 257 VKWMAPEALFDRIYTHQSDVWSFGVLL 283
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 2e-08
Identities = 49/245 (20%), Positives = 100/245 (40%), Gaps = 20/245 (8%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
VY + + VAI++ + Q P + E + ++ +VN + GDE +
Sbjct: 35 TVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 94
Query: 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD 195
V +Y+ +L+ + + + V QAL+ +S ++ D+ + +L
Sbjct: 95 VMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLG 150
Query: 196 EDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSYGTVLLDLL 251
DG +L+ FG +S + + TP PE + P+ I+S G + ++++
Sbjct: 151 MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
Query: 252 SGK----HIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPD 307
G+ + P AL +I L + + + + ++CL+ + + R
Sbjct: 211 EGEPPYLNENPLRALYLIATNGTPELQNPE---KLSAI----FRDFLNRCLEMDVEKRGS 263
Query: 308 VKFLL 312
K LL
Sbjct: 264 AKELL 268
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 Length = 118 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 2e-08
Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Query: 393 KKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVR-RALSYLMIEQAELALRDAMQAQ 451
K+ G+ A + +A++ YS+ ++ P V R+ +Y + A D +
Sbjct: 8 KEKGNKALSVGNIDDALQCYSE--AIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTV 65
Query: 452 VCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFE 488
P+W + +A AL L +A+ +G E
Sbjct: 66 DLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHE 102
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 Length = 281 | Back alignment and structure |
|---|
Score = 54.5 bits (131), Expect = 2e-08
Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Query: 393 KKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQV 452
K+ G+ F + + A Y + ++ + + + RAL YL ++Q E AL D +A
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAITRNPLVA-VYYTNRALCYLKMQQPEQALADCRRALE 66
Query: 453 CLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494
+ A + ++ +A L S +++ +
Sbjct: 67 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLN 108
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 2e-08
Identities = 46/245 (18%), Positives = 95/245 (38%), Gaps = 20/245 (8%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
+V R + R VA+K + E + + +H +V + G+E +
Sbjct: 60 IVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWV 119
Query: 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD 195
+ +++ L+ + + L E V + QAL + ++ ++ D+ + +L
Sbjct: 120 LMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHA-QGVIHRDIKSDSILLT 175
Query: 196 EDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSYGTVLLDLL 251
DG +LS FG +L TP PE + E I+S G ++++++
Sbjct: 176 LDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMV 235
Query: 252 SGK----HIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPD 307
G+ P A+ +R L +S + + L + + L + ++R
Sbjct: 236 DGEPPYFSDSPVQAMKRLRDSPPPKLKNSH---KVSPV----LRDFLERMLVRDPQERAT 288
Query: 308 VKFLL 312
+ LL
Sbjct: 289 AQELL 293
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 55.4 bits (133), Expect = 2e-08
Identities = 36/299 (12%), Positives = 73/299 (24%), Gaps = 64/299 (21%)
Query: 77 VVYRGR-LKNNRLVAIKRFS---RQSWPDPHQFVTEAAGLGNVRHKR------------- 119
+ + R Q E L +R +
Sbjct: 93 AYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIF 152
Query: 120 ---LVNLIGCCAEGDER-------------LLVAQYMPNDTLSKHLFHWDKQ--PLPWEM 161
LV R L T + L L
Sbjct: 153 PFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHA 212
Query: 162 RVRVAYYIAQALDHCNSQNRKLYH-DL---NAYRVLFDEDGDPRLSSFGLMKNSRDGKSY 217
R+++ + + L + L H L + ++ D+ G L+ F +
Sbjct: 213 RLQLTLQVIRLLASLHHYG--LVHTYLRPVD---IVLDQRGGVFLTGFEHLVRDGASAVS 267
Query: 218 STNLAYTPPEFL----------RTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRG 267
+ PPE + ++ G + + P+ + G
Sbjct: 268 PIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD--LPNTDDAALGG 325
Query: 268 KNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVAS 326
+ ++ + L+E L+Y +DR + Q +TE+++
Sbjct: 326 SEWIFRSCKNI-----PQPVRALLE---GFLRYPKEDRLLPLQAMETPEYEQLRTELSA 376
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 2e-08
Identities = 48/262 (18%), Positives = 99/262 (37%), Gaps = 37/262 (14%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPDP--HQFVTEAAGLGNVRHK--RLVNLIGCCAEGDE 132
V++ + ++ AIK + + + + E A L ++ +++ L
Sbjct: 43 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 102
Query: 133 RLLVAQYMPNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNA 189
+V + D L W K+ + R + +A+ + + H DL
Sbjct: 103 IYMVMECGNID-----LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKP 155
Query: 190 YRVLFDEDGDPRLSSFGL---MKNSRDGKSYSTN---LAYTPPEFLR-----------TG 232
L DG +L FG+ M+ + + Y PPE ++
Sbjct: 156 ANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKS 214
Query: 233 RVIPESVIYSYGTVLLDLLSGKHIPP-SHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291
++ P+S ++S G +L + GK P ++ I L ++D + E ++ + L
Sbjct: 215 KISPKSDVWSLGCILYYMTYGK--TPFQQIINQI--SKLHAIIDPNHEIEFPDIPEKDLQ 270
Query: 292 ELASKCLQYEAKDRPDVKFLLS 313
++ CL+ + K R + LL+
Sbjct: 271 DVLKCCLKRDPKQRISIPELLA 292
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 3e-08
Identities = 39/203 (19%), Positives = 69/203 (33%), Gaps = 41/203 (20%)
Query: 78 VYRGRLK------NNRLVAIKRF-SRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAE 129
V VA+K S + ++E + ++ +H+ +VNL+G C
Sbjct: 62 VVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121
Query: 130 GDERLLVAQYMPNDTLSKHL------------FHWDKQPLPWEMRVRVAYYIAQALDHCN 177
G L++ +Y L L F + + +AQ +
Sbjct: 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA 181
Query: 178 SQNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAY------------T 224
S + H D+ A VL ++ FGL +RD + + Y
Sbjct: 182 S--KNCIHRDVAARNVLLTNGHVAKIGDFGL---ARD--IMNDS-NYIVKGNARLPVKWM 233
Query: 225 PPEFLRTGRVIPESVIYSYGTVL 247
PE + +S ++SYG +L
Sbjct: 234 APESIFDCVYTVQSDVWSYGILL 256
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 3e-08
Identities = 48/272 (17%), Positives = 89/272 (32%), Gaps = 49/272 (18%)
Query: 77 VVYRGRLK-NNRLVAIK--RFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
VV+ + K ++ AIK R + + + E L + H +V E +
Sbjct: 20 VVFEAKNKVDDCNYAIKRIRLPNREL-AREKVMREVKALAKLEHPGIVRYFNAWLEKNTT 78
Query: 134 LLVAQYMPNDTL--------SKHLFHW-----DKQPLPWEMRVRVAYYIAQALDHCNSQN 180
+ P L ++L W + + + + IA+A++ +S
Sbjct: 79 EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS-- 136
Query: 181 RKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRV----- 234
+ L H DL + F D ++ FGL+ + T L P TG+V
Sbjct: 137 KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLY 196
Query: 235 -IPESV----------IYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA 283
PE + I+S G +L +LL P S + + ++
Sbjct: 197 MSPEQIHGNSYSHKVDIFSLGLILFELL----YPFSTQ------MERVRTLTDVRNLKFP 246
Query: 284 NEDAT---QLVELASKCLQYEAKDRPDVKFLL 312
+ L +RP+ ++
Sbjct: 247 PLFTQKYPCEYVMVQDMLSPSPMERPEAINII 278
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 3e-08
Identities = 41/207 (19%), Positives = 80/207 (38%), Gaps = 45/207 (21%)
Query: 78 VYRGRL--------KNNRLVAIKRF-SRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCC 127
V K VA+K + D V+E + + +HK ++NL+G C
Sbjct: 97 VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 156
Query: 128 AEGDERLLVAQYMPNDTLSKHL--------------FHWDKQPLPWEMRVRVAYYIAQAL 173
+ ++ +Y L ++L ++ + ++ V Y +A+ +
Sbjct: 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 216
Query: 174 DHCNSQNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAY--------- 223
++ S +K H DL A VL E+ +++ FGL +RD + + Y
Sbjct: 217 EYLAS--QKCIHRDLAARNVLVTENNVMKIADFGL---ARD--INNID-YYKKTTNGRLP 268
Query: 224 ---TPPEFLRTGRVIPESVIYSYGTVL 247
PE L +S ++S+G ++
Sbjct: 269 VKWMAPEALFDRVYTHQSDVWSFGVLM 295
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 3e-08
Identities = 42/207 (20%), Positives = 68/207 (32%), Gaps = 45/207 (21%)
Query: 78 VYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAE 129
V VA+K + ++E L + H +VNL+G C
Sbjct: 39 VVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98
Query: 130 GDERLLVAQYMPNDTLSKHL----------------FHWDKQPLPWEMRVRVAYYIAQAL 173
G L++ +Y L L D+ L E + +Y +A+ +
Sbjct: 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 158
Query: 174 DHCNSQNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAY--------- 223
S + H DL A +L ++ FGL +RD + + Y
Sbjct: 159 AFLAS--KNCIHRDLAARNILLTHGRITKICDFGL---ARD--IKNDS-NYVVKGNARLP 210
Query: 224 ---TPPEFLRTGRVIPESVIYSYGTVL 247
PE + ES ++SYG L
Sbjct: 211 VKWMAPESIFNCVYTFESDVWSYGIFL 237
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 4e-08
Identities = 48/262 (18%), Positives = 99/262 (37%), Gaps = 37/262 (14%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPDP--HQFVTEAAGLGNVRHK--RLVNLIGCCAEGDE 132
V++ + ++ AIK + + + + E A L ++ +++ L
Sbjct: 71 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 130
Query: 133 RLLVAQYMPNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNA 189
+V + D L W K+ + R + +A+ + + H DL
Sbjct: 131 IYMVMECGNID-----LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKP 183
Query: 190 YRVLFDEDGDPRLSSFGL---MKNSRDGKSYSTN---LAYTPPEFLR-----------TG 232
L DG +L FG+ M+ + + Y PPE ++
Sbjct: 184 ANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKS 242
Query: 233 RVIPESVIYSYGTVLLDLLSGKHIPP-SHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291
++ P+S ++S G +L + GK P ++ I L ++D + E ++ + L
Sbjct: 243 KISPKSDVWSLGCILYYMTYGK--TPFQQIINQI--SKLHAIIDPNHEIEFPDIPEKDLQ 298
Query: 292 ELASKCLQYEAKDRPDVKFLLS 313
++ CL+ + K R + LL+
Sbjct: 299 DVLKCCLKRDPKQRISIPELLA 320
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} Length = 126 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 4e-08
Identities = 17/97 (17%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Query: 393 KKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS-GTVFVRRALSYLMIEQAELALRDAMQAQ 451
K G+ F+ D+ A+ +Y++ ++ P ++ RA + + + AL D
Sbjct: 17 KNKGNEYFKKGDYPTAMRHYNE--AVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCI 74
Query: 452 VCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFE 488
++ + +A L + + AQ D +
Sbjct: 75 RLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVD 111
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 4e-08
Identities = 56/264 (21%), Positives = 93/264 (35%), Gaps = 51/264 (19%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
+VY GR L N +AIK + E A +++HK +V +G +E +
Sbjct: 37 IVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKI 96
Query: 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALD-----HCNSQNRKLYHDLNAY 190
+ +P +LS L E + Y Q L+ H N+ ++ D+
Sbjct: 97 FMEQVPGGSLSALLRSKWGPLKDNEQTIGF--YTKQILEGLKYLH---DNQIVHRDIKGD 151
Query: 191 RVLFD-EDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESV------ 239
VL + G ++S FG K + T PE +I +
Sbjct: 152 NVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPE------IIDKGPRGYGKA 205
Query: 240 --IYSYGTVLLDLLSGKHIPPSHALD--------VIRGKNLLLLMDS-SLEGQYANEDAT 288
I+S G ++++ +GK PP + L V K + +S S E +
Sbjct: 206 ADIWSLGCTIIEMATGK--PPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAK------- 256
Query: 289 QLVELASKCLQYEAKDRPDVKFLL 312
KC + + R LL
Sbjct: 257 ---AFILKCFEPDPDKRACANDLL 277
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 5e-08
Identities = 48/201 (23%), Positives = 81/201 (40%), Gaps = 30/201 (14%)
Query: 78 VYRGR-LKNNRLVAIK----RFSRQSWPDP---HQFVTEAAGLGNVRHKRLVNL--IGCC 127
V+ R L+++R VA+K +R DP +F EA + H +V + G
Sbjct: 28 VHLARDLRDHRDVAVKVLRADLAR----DPSFYLRFRREAQNAAALNHPAIVAVYDTGEA 83
Query: 128 AEGDERL--LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH 185
L +V +Y+ TL + + P+ + + V QAL+ S + H
Sbjct: 84 ETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNF--SHQNGIIH 139
Query: 186 -DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN-------LAYTPPEFLRTGRVIPE 237
D+ ++ ++ FG+ + D + T Y PE R V
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 238 SVIYSYGTVLLDLLSGKHIPP 258
S +YS G VL ++L+G+ PP
Sbjct: 200 SDVYSLGCVLYEVLTGE--PP 218
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 6e-08
Identities = 48/262 (18%), Positives = 99/262 (37%), Gaps = 37/262 (14%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPDP--HQFVTEAAGLGNVRHK--RLVNLIGCCAEGDE 132
V++ + ++ AIK + + + + E A L ++ +++ L
Sbjct: 24 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 83
Query: 133 RLLVAQYMPNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNA 189
+V + D L W K+ + R + +A+ + + H DL
Sbjct: 84 IYMVMECGNID-----LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKP 136
Query: 190 YRVLFDEDGDPRLSSFGL---MKNSRDGKSYSTN---LAYTPPEFLR-----------TG 232
L DG +L FG+ M+ + + Y PPE ++
Sbjct: 137 ANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKS 195
Query: 233 RVIPESVIYSYGTVLLDLLSGKHIPP-SHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291
++ P+S ++S G +L + GK P ++ I L ++D + E ++ + L
Sbjct: 196 KISPKSDVWSLGCILYYMTYGK--TPFQQIINQI--SKLHAIIDPNHEIEFPDIPEKDLQ 251
Query: 292 ELASKCLQYEAKDRPDVKFLLS 313
++ CL+ + K R + LL+
Sbjct: 252 DVLKCCLKRDPKQRISIPELLA 273
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 6e-08
Identities = 40/262 (15%), Positives = 77/262 (29%), Gaps = 41/262 (15%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPDPHQ---FVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
++ +R VA+ Q ++ L + + ++
Sbjct: 46 QFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAG 105
Query: 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYR 191
L+VA+++ +L + D P P +R +A A D + + + R
Sbjct: 106 GLVVAEWIRGGSLQEVA---DTSPSPVGA-IRAMQSLAAAADA--AHRAGVALSIDHPSR 159
Query: 192 VLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
V DGD L+ M P+ I G L LL
Sbjct: 160 VRVSIDGDVVLAYPATM-----------------------PDANPQDDIRGIGASLYALL 196
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLE---GQYANEDATQLVELASKCLQYEAKDRP-- 306
+ P V G + + Q+ +A++ +Q + R
Sbjct: 197 VNR--WPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIRSAS 254
Query: 307 DVKFLLSAVAPLQKQTEVASHV 328
+ L+ + +TEV +
Sbjct: 255 TLLNLMQQATAVADRTEVLGPI 276
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} Length = 164 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 8e-08
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 393 KKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVR-RALSYLMIEQAELALRDAMQAQ 451
K G+ A K++ AI+ Y++ ++ P+ +++ RA +Y Q E A DA A
Sbjct: 15 KSEGNAAMARKEYSKAIDLYTQ--ALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELAT 72
Query: 452 VCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQN 493
V P++ A+ LA + A++ G E +
Sbjct: 73 VVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGS 114
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 1e-07
Identities = 40/193 (20%), Positives = 77/193 (39%), Gaps = 20/193 (10%)
Query: 78 VYRGR-LKNNRLVAIKRFSRQSWPDP---HQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
VYR + VAIK +++ + E ++H ++ L + +
Sbjct: 27 VYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYV 86
Query: 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQNRKLYH-DLNA 189
LV + N ++++L + K P E R +++ Q + + +S + H DL
Sbjct: 87 YLVLEMCHNGEMNRYLKNRVK-PFS-ENEAR--HFMHQIITGMLYLHS--HGILHRDLTL 140
Query: 190 YRVLFDEDGDPRLSSFGL-MKNSRDGKSYSTN---LAYTPPEFLRTGRVIPESVIYSYGT 245
+L + + +++ FGL + + + T Y PE ES ++S G
Sbjct: 141 SNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGC 200
Query: 246 VLLDLLSGKHIPP 258
+ LL G+ PP
Sbjct: 201 MFYTLLIGR--PP 211
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 1e-07
Identities = 46/252 (18%), Positives = 79/252 (31%), Gaps = 34/252 (13%)
Query: 78 VYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136
V+R + + A+K+ + + E + R+V L G EG +
Sbjct: 74 VHRMKDKQTGFQCAVKKVRLEVFRV-----EELVACAGLSSPRIVPLYGAVREGPWVNIF 128
Query: 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALD-----HCNSQNRKLYHDLNAYR 191
+ + +L + + P E R Y+ QAL+ H R L+ D+ A
Sbjct: 129 MELLEGGSLGQLIKQMGCLP---EDRALY--YLGQALEGLEYLH---TRRILHGDVKADN 180
Query: 192 VLFDEDGDP-RLSSFGLMKNSRDGKSYSTNLAY-----TP----PEFLRTGRVIPESVIY 241
VL DG L FG + + L T PE + + I+
Sbjct: 181 VLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIW 240
Query: 242 SYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT-QLVELASKCLQY 300
S ++L +L+G P L + + + + L+
Sbjct: 241 SSCCMMLHMLNGC--HPWTQYFRGPL--CLKIASEPPPIREIPPSCAPLTAQAIQEGLRK 296
Query: 301 EAKDRPDVKFLL 312
E R L
Sbjct: 297 EPVHRASAMELR 308
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* Length = 137 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 1e-07
Identities = 22/103 (21%), Positives = 42/103 (40%), Gaps = 3/103 (2%)
Query: 393 KKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVR-RALSYLMIEQAELALRDAMQAQ 451
K+ G+ F + + A Y + ++ P V+ RAL YL ++Q E AL D +A
Sbjct: 13 KEQGNRLFVGRKYPEAAACYGR--AITRNPLVAVYYTNRALCYLKMQQPEQALADCRRAL 70
Query: 452 VCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494
+ A + ++ +A L S +++ +
Sbjct: 71 ELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLN 113
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 52.7 bits (126), Expect = 1e-07
Identities = 25/262 (9%), Positives = 63/262 (24%), Gaps = 37/262 (14%)
Query: 77 VVYRGRLKNNR------LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG 130
VY + +K + + + L +
Sbjct: 80 QVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139
Query: 131 DERLLVAQYMPNDTLSKHL---FHWDKQPLPWEMRVRVAYYIAQALDHCNSQ-------- 179
+ +LV + TL + + ++ +P + + A + ++ +
Sbjct: 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIK 199
Query: 180 --NRKLYHDLNAYRVLFDEDGDPRLSSFGL---MKNSRDGKSYSTN---LAYTPPEFLRT 231
N L + D L G MK G ++ + E L +
Sbjct: 200 PDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEML-S 258
Query: 232 GRVIPESV-IYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290
+ + + + +L G ++ ++ + + + +
Sbjct: 259 NKPWNYQIDYFGVAATVYCMLFGTYMK-------VKNEGGECKPEGLFRRLPHLDMWNEF 311
Query: 291 VELASKCLQYEAKDRPDVKFLL 312
L LL
Sbjct: 312 FH---VMLNIPDCHHLPSLDLL 330
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 43/206 (20%), Positives = 75/206 (36%), Gaps = 44/206 (21%)
Query: 78 VYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNV-RHKRLVNLIGCC-A 128
V R VA+K + + ++E L ++ H +VNL+G C
Sbjct: 43 VIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 102
Query: 129 EGDERLLVAQYMPNDTLSKHL--------------FHWDKQPLPWEMRVRVAYYIAQALD 174
G +++ ++ LS +L K L E + ++ +A+ ++
Sbjct: 103 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGME 162
Query: 175 HCNSQNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAY---------- 223
S RK H DL A +L E ++ FGL +RD Y Y
Sbjct: 163 FLAS--RKCIHRDLAARNILLSEKNVVKICDFGL---ARD--IYKDP-DYVRKGDARLPL 214
Query: 224 --TPPEFLRTGRVIPESVIYSYGTVL 247
PE + +S ++S+G +L
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLL 240
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 51.7 bits (125), Expect = 2e-07
Identities = 39/188 (20%), Positives = 80/188 (42%), Gaps = 16/188 (8%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134
VVY+ + A+K+ + + P + E + L ++H +V L +
Sbjct: 17 VVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLV 76
Query: 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQNRKLYHDLNAYR 191
LV +++ D L K L D E ++ Q + +C+ R L+ DL
Sbjct: 77 LVFEHLDQD-LKKLL---DVCEGGLESVT-AKSFLLQLLNGIAYCHD-RRVLHRDLKPQN 130
Query: 192 VLFDEDGDPRLSSFGLMKN-SRDGKSYSTN---LAYTPPEFLRTGRVIPESV-IYSYGTV 246
+L + +G+ +++ FGL + + Y+ L Y P+ L + ++ I+S G +
Sbjct: 131 LLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCI 190
Query: 247 LLDLLSGK 254
++++G
Sbjct: 191 FAEMVNGT 198
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A Length = 166 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 2e-07
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 393 KKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVR-RALSYLMIEQAELALRDAMQAQ 451
K + F+ KD++NAI++YS+ ++ PS ++ R+L+YL E AL DA +A
Sbjct: 17 KTQANDYFKAKDYENAIKFYSQ--AIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAI 74
Query: 452 VCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFE 488
++ +Y +A + LG A +
Sbjct: 75 ELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVK 111
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 51/215 (23%), Positives = 80/215 (37%), Gaps = 56/215 (26%)
Query: 78 VYRGRLKN------NRLVAIK----RFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCC 127
V++ R +VA+K S D F EAA + + +V L+G C
Sbjct: 63 VFQARAPGLLPYEPFTMVAVKMLKEEASADMQAD---FQREAALMAEFDNPNIVKLLGVC 119
Query: 128 AEGDERLLVAQYMPNDTLSKHL----------------------FHWDKQPLPWEMRVRV 165
A G L+ +YM L++ L PL ++ +
Sbjct: 120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCI 179
Query: 166 AYYIAQALDHCNSQNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAY- 223
A +A + + + RK H DL L E+ +++ FGL SR+ YS + Y
Sbjct: 180 ARQVAAGMAYLSE--RKFVHRDLATRNCLVGENMVVKIADFGL---SRN--IYSAD-YYK 231
Query: 224 -----------TPPEFLRTGRVIPESVIYSYGTVL 247
PPE + R ES +++YG VL
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVL 266
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 393 KKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQV 452
K + F+ KD++NAI++YS+ + + + + R+L+YL E AL DA +A
Sbjct: 10 KTQANDYFKAKDYENAIKFYSQAIELNPSNA-IYYGNRSLAYLRTECYGYALGDATRAIE 68
Query: 453 CLPEWPTAFYMQALALNKLGMETDAQD 479
++ +Y +A + LG A
Sbjct: 69 LDKKYIKGYYRRAASNMALGKFRAALR 95
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 3e-07
Identities = 34/211 (16%), Positives = 73/211 (34%), Gaps = 36/211 (17%)
Query: 78 VYRGRLKNNRLVAIKRFSRQ-----------------SWPDPHQFVTEAAGLGNVRHKRL 120
+ K+N+ A+K++ + F E + +++++
Sbjct: 47 IILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYC 105
Query: 121 VNLIGCCAEGDERLLVAQYMPN----DTLSKH--LFHWDKQPLPWEMRVRVAYYIAQALD 174
+ G DE ++ +YM N L +P ++ + + +
Sbjct: 106 LTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFS 165
Query: 175 HCNSQNRKLYHDL---NAYRVLFDEDGDPRLSSFGLMKNSRDGKSYST--NLAYTPPEFL 229
+ +++ + D+ N +L D++G +LS FG + D K + + PPEF
Sbjct: 166 YIHNEKNICHRDVKPSN---ILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFF 222
Query: 230 RTGRVI--PESVIYSYGTVLLDLLSGKHIPP 258
+ I+S G L + P
Sbjct: 223 SNESSYNGAKVDIWSLGICLYVMFYNV--VP 251
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 3e-07
Identities = 43/212 (20%), Positives = 72/212 (33%), Gaps = 50/212 (23%)
Query: 78 VYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAE 129
V + VA+K + + ++E + + H+ +VNL+G C
Sbjct: 61 VMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120
Query: 130 GDERLLVAQYMPNDTLSKHL---------------------FHWDKQPLPWEMRVRVAYY 168
L+ +Y L +L D L +E + AY
Sbjct: 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQ 180
Query: 169 IAQALDHCNSQNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAY---- 223
+A+ ++ + H DL A VL ++ FGL +RD S + Y
Sbjct: 181 VAKGMEFLEF--KSCVHRDLAARNVLVTHGKVVKICDFGL---ARD--IMSDS-NYVVRG 232
Query: 224 --------TPPEFLRTGRVIPESVIYSYGTVL 247
PE L G +S ++SYG +L
Sbjct: 233 NARLPVKWMAPESLFEGIYTIKSDVWSYGILL 264
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} Length = 133 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 4e-07
Identities = 20/94 (21%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Query: 396 GDIAFRDKDFKNAIEYYSKLVSMMSVPS-GTVFVRRALSYLMIEQAELALRDAMQAQVCL 454
G+ F+ D+ A+++Y++ ++ P ++ RA Y + + +LAL+D +
Sbjct: 23 GNECFQKGDYPQAMKHYTE--AIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLE 80
Query: 455 PEWPTAFYMQALALNKLGMETDAQDMLNDGASFE 488
P + + +A AL + T A D+ +
Sbjct: 81 PTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLD 114
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 5e-07
Identities = 56/246 (22%), Positives = 99/246 (40%), Gaps = 23/246 (9%)
Query: 77 VVYRGR-LKNNRLVAIKRFS-RQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134
V++G + ++VAIK ++ + E L + G + +
Sbjct: 37 EVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLW 96
Query: 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194
++ +Y+ + L PL + I + LD+ +S +K++ D+ A VL
Sbjct: 97 IIMEYLGGGSAL-DLLE--PGPLDETQIATILREILKGLDYLHS-EKKIHRDIKAANVLL 152
Query: 195 DEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSYGTVLLDL 250
E G+ +L+ FG+ D + TP PE ++ ++ I+S G ++L
Sbjct: 153 SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 212
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSS----LEGQYANEDATQLVELASKCLQYEAKDRP 306
G+ PP L ++ +L L+ + LEG Y+ L E CL E RP
Sbjct: 213 ARGE--PPHSELHPMK---VLFLIPKNNPPTLEGNYSKP----LKEFVEACLNKEPSFRP 263
Query: 307 DVKFLL 312
K LL
Sbjct: 264 TAKELL 269
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 50.2 bits (121), Expect = 6e-07
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 16/188 (8%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134
VVY+ + R+VA+KR + + P + E + L + H +V+LI
Sbjct: 36 VVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLT 95
Query: 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQNRKLYHDLNAYR 191
LV ++M D L K L D+ + + Y+ Q + HC+ +R L+ DL
Sbjct: 96 LVFEFMEKD-LKKVL---DENKTGLQDSQ-IKIYLYQLLRGVAHCHQ-HRILHRDLKPQN 149
Query: 192 VLFDEDGDPRLSSFGLMKN-SRDGKSYSTN---LAYTPPEFLRTGRVIPESV-IYSYGTV 246
+L + DG +L+ FGL + +SY+ L Y P+ L + SV I+S G +
Sbjct: 150 LLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCI 209
Query: 247 LLDLLSGK 254
++++GK
Sbjct: 210 FAEMITGK 217
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 7e-07
Identities = 37/271 (13%), Positives = 79/271 (29%), Gaps = 53/271 (19%)
Query: 77 VVYRGR-LKNNRLVAIKR--FSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDE 132
V++ + + AIKR D + E + +H +V AE D
Sbjct: 26 SVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDH 85
Query: 133 RLLVAQYMPNDTLSKHLFHWDKQPLPW-EMRVRVAYY-IAQALDHCNSQNRKLYH-DLNA 189
L+ +Y +L+ + + + E ++ + + L + +S + L H D+
Sbjct: 86 MLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS--LVHMDIKP 143
Query: 190 YRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA-------------------YTPPEFLR 230
+ P +S ++ + + E
Sbjct: 144 SNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANE--- 200
Query: 231 TGRVIPESV-------IYSYGTVLLDLLSGKHIPPS--HALDVIRGKNLLLLMDSSLEGQ 281
V+ E+ I++ ++ + P IR L +
Sbjct: 201 ---VLQENYTHLPKADIFALALTVVCAAGAEP-LPRNGDQWHEIRQGRL-----PRIPQV 251
Query: 282 YANEDATQLVELASKCLQYEAKDRPDVKFLL 312
+ E EL + + + RP L+
Sbjct: 252 LSQE----FTELLKVMIHPDPERRPSAMALV 278
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 9e-07
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 16/155 (10%)
Query: 112 LGNVRHKRLVNLIGCCAEGDERL-LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIA 170
L V + +V+L E + L LV M L H++H + P E R +Y A
Sbjct: 238 LEKVNSRFVVSLA-YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP-EARAV--FYAA 293
Query: 171 Q---ALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYST---NLAYT 224
+ L+ + + +Y DL +L D+ G R+S GL + +G++ + Y
Sbjct: 294 EICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYM 352
Query: 225 PPEFLRTGRVIPESVIY-SYGTVLLDLLSGKHIPP 258
PE ++ S + + G +L ++++G+ P
Sbjct: 353 APEVVK-NERYTFSPDWWALGCLLYEMIAGQ--SP 384
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} Length = 126 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 1e-06
Identities = 19/96 (19%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
Query: 399 AFRDKDFKNAIEYYSKLVSMMSVPSGTVFVR-RALSYLMIEQAELALRDAMQAQVCLPEW 457
F D+ NA++ Y++++ P RA + + A+ D +A P +
Sbjct: 14 YFTKSDWPNAVKAYTEMIKRA--PEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF 71
Query: 458 PTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQN 493
A+ +A A + A + L+ + +A+ N
Sbjct: 72 VRAYIRKATAQIAVKEYASALETLDAARTKDAEVNN 107
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 49.9 bits (119), Expect = 1e-06
Identities = 40/195 (20%), Positives = 67/195 (34%), Gaps = 27/195 (13%)
Query: 77 VVYRG---RLKNNRLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
+Y + N R V +K + + E L V H +V + D
Sbjct: 95 WIYLALDRNV-NGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDR 153
Query: 133 RL-----LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDL 187
+V +Y+ +L + Q LP + I AL + +S +Y+DL
Sbjct: 154 HGDPVGYIVMEYVGGQSLKRSK----GQKLPVAEAIAYLLEILPALSYLHSIG-LVYNDL 208
Query: 188 ---NAYRVLFDEDGDPRLSSFGLMKN-SRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSY 243
N ++ E+ +L G + + G Y T + PE +R + IY+
Sbjct: 209 KPEN---IMLTEEQ-LKLIDLGAVSRINSFGYLYGT-PGFQAPEIVR-TGPTVATDIYTV 262
Query: 244 GTVLLDLLSGKHIPP 258
G L L P
Sbjct: 263 GRTLAALTLDL--PT 275
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 2e-06
Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 3/130 (2%)
Query: 78 VYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136
VY+ + + L A K +S + ++ E L H +V L+G + ++
Sbjct: 35 VYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94
Query: 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE 196
++ P + + + L V + +AL+ +S R ++ DL A VL
Sbjct: 95 IEFCPGGAVDA-IMLELDRGLTEPQIQVVCRQMLEALNFLHS-KRIIHRDLKAGNVLMTL 152
Query: 197 DGDPRLSSFG 206
+GD RL+ FG
Sbjct: 153 EGDIRLADFG 162
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 3e-06
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 18/164 (10%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
+V + R R+VAIK+F + E L +RH+ LVNL+ C +
Sbjct: 40 MVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRW 99
Query: 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQNRKLYHDLNAY 190
LV +++ + + L + P + +V V Y+ Q + C+S + ++ D+
Sbjct: 100 YLVFEFVDHT-ILDDL---ELFPNGLDYQV-VQKYLFQIINGIGFCHS-HNIIHRDIKPE 153
Query: 191 RVLFDEDGDPRLSSFGLMKNSRD-GKSYSTN----LAYTPPEFL 229
+L + G +L FG + G+ Y + Y PE L
Sbjct: 154 NILVSQSGVVKLCDFGFARTLAAPGEVY-DDEVATRWYRAPELL 196
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 Length = 131 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 5e-06
Identities = 20/94 (21%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
Query: 396 GDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVR-RALSYLMIEQAELALRDAMQAQVCL 454
G+ + ++F+ A+ +Y K ++ P+ V+ RA +Y + A++D +A
Sbjct: 19 GNEQMKVENFEAAVHFYGK--AIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICID 76
Query: 455 PEWPTAFYMQALALNKLGMETDAQDMLNDGASFE 488
P + A+ LAL+ L +A +
Sbjct: 77 PAYSKAYGRMGLALSSLNKHVEAVAYYKKALELD 110
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 9e-06
Identities = 49/269 (18%), Positives = 81/269 (30%), Gaps = 44/269 (16%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLG-NVRHKRLVNLIGCCAEGDERLL 135
VV++G R VA+KR + E L + H ++ +
Sbjct: 31 VVFQGS-FQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYI 86
Query: 136 VAQYMPNDTL-----SKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQN---RKL---- 183
+ N L SK++ + + + + IA + H +S R L
Sbjct: 87 ALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQN 145
Query: 184 -----YHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA--------YTPPEFLR 230
A + E+ +S FGL K G+S + PE L
Sbjct: 146 ILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLE 205
Query: 231 TGRVIPESV-------IYSYGTVLLDLLSGKHIPPSHALDV---IRGKNLLLLMDSSLEG 280
+ I+S G V +LS P I L L
Sbjct: 206 ESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHD 265
Query: 281 QYANEDATQLVELASKCLQYEAKDRPDVK 309
+ +AT L+ S+ + ++ RP
Sbjct: 266 RSLIAEATDLI---SQMIDHDPLKRPTAM 291
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 1e-05
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 16/163 (9%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
V++ + + + +VA+KR + P + E L ++HK +V L +
Sbjct: 17 TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKL 76
Query: 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQNRKLYHDLNAY 190
LV ++ D L K+ D + + V ++ Q L C+S L+ DL
Sbjct: 77 TLVFEFCDQD-LKKYF---DSCNGDLDPEI-VKSFLFQLLKGLGFCHS-RNVLHRDLKPQ 130
Query: 191 RVLFDEDGDPRLSSFGLMKN-SRDGKSYSTN---LAYTPPEFL 229
+L + +G+ +L++FGL + + YS L Y PP+ L
Sbjct: 131 NLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVL 173
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 24/159 (15%)
Query: 112 LGNVRHKRLVNLIGCCAEGDERL-LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIA 170
L N RH L L + +RL V +Y L FH ++ + E R R +Y A
Sbjct: 202 LQNSRHPFLTALK-YSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRAR--FYGA 255
Query: 171 Q---ALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK-NSRDGKSYST---NLAY 223
+ ALD+ +S+ +Y DL ++ D+DG +++ FGL K +DG + T Y
Sbjct: 256 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEY 315
Query: 224 TPPEFLRT---GRVIPESVI-YSYGTVLLDLLSGKHIPP 258
PE L GR +V + G V+ +++ G+ P
Sbjct: 316 LAPEVLEDNDYGR----AVDWWGLGVVMYEMMCGR--LP 348
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 1e-05
Identities = 36/153 (23%), Positives = 58/153 (37%), Gaps = 18/153 (11%)
Query: 114 NVRHKRLVNLIGCCAEGDERL-LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ- 171
+V + ++L + M L HL + +Y A+
Sbjct: 248 TGDCPFIVCMS-YAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRFYAAEI 301
Query: 172 --ALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYS---TNLAYTPP 226
L+H +++ +Y DL +L DE G R+S GL + K ++ T+ Y P
Sbjct: 302 ILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTH-GYMAP 359
Query: 227 EFLRTGRVIPESVIY-SYGTVLLDLLSGKHIPP 258
E L+ G S + S G +L LL G P
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGH--SP 390
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 1e-05
Identities = 50/265 (18%), Positives = 92/265 (34%), Gaps = 37/265 (13%)
Query: 77 VVYRGR-LKNNRLVAIKRFS-RQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134
VV VAIKR + + + + E + H +V+ DE
Sbjct: 30 VVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW 89
Query: 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIA-------QALDHCNSQNRKLYHDL 187
LV + + ++ + + V IA + L++ + N +++ D+
Sbjct: 90 LVMKLLSGGSVL-DIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK-NGQIHRDV 147
Query: 188 NAYRVLFDEDGDPRLSSFG----LMKNSRDGKSYSTN-LAYTP----PEFLRTGRVIPES 238
A +L EDG +++ FG L ++ TP PE V+ +
Sbjct: 148 KAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE------VMEQV 201
Query: 239 VIY-------SYGTVLLDLLSGK----HIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287
Y S+G ++L +G PP L + + L + + +
Sbjct: 202 RGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYG 261
Query: 288 TQLVELASKCLQYEAKDRPDVKFLL 312
++ S CLQ + + RP LL
Sbjct: 262 KSFRKMISLCLQKDPEKRPTAAELL 286
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 1e-05
Identities = 45/252 (17%), Positives = 98/252 (38%), Gaps = 20/252 (7%)
Query: 71 GDKAPNVVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE 129
G+ + VY+ + ++VAIK+ +S D + + E + + +V G +
Sbjct: 38 GEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFK 95
Query: 130 GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNA 189
+ +V +Y ++S + + L + + + L++ + RK++ D+ A
Sbjct: 96 NTDLWIVMEYCGAGSVSD-IIRLRNKTLTEDEIATILQSTLKGLEYLHF-MRKIHRDIKA 153
Query: 190 YRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSYGT 245
+L + +G +L+ FG+ D + + TP PE ++ + I+S G
Sbjct: 154 GNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGI 213
Query: 246 VLLDLLSGK----HIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYE 301
+++ GK I P A+ +I +++ + +CL
Sbjct: 214 TAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPE---LWSDN----FTDFVKQCLVKS 266
Query: 302 AKDRPDVKFLLS 313
+ R LL
Sbjct: 267 PEQRATATQLLQ 278
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 46.1 bits (109), Expect = 2e-05
Identities = 42/306 (13%), Positives = 81/306 (26%), Gaps = 69/306 (22%)
Query: 70 SGDKAPNVVYRGR-LKNNRLVAIKRFSRQSWPDPH--QFVTEAAGLGNVRHKRLVNLIGC 126
G + V R V ++R + ++ + E H +V
Sbjct: 35 KGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRAT 94
Query: 127 CAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHD 186
+E +V +M + + + + + +ALD+ + ++
Sbjct: 95 FIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH-MGYVHRS 153
Query: 187 LNAYRVLFDEDGDPRLSSFGL-------MKNSRDGKSYSTNLAYTP----PEFLRTGRVI 235
+ A +L DG LS + R + PE V+
Sbjct: 154 VKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPE------VL 207
Query: 236 PESV--------IYSYGTVLLDLLSGK----HIPPSHALDVIRGKNLLLLMDSSLEGQYA 283
+++ IYS G +L +G +P + L + L+D+S
Sbjct: 208 QQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEE 267
Query: 284 NEDATQLV------------------------------------ELASKCLQYEAKDRPD 307
+ +CLQ RP
Sbjct: 268 LTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPS 327
Query: 308 VKFLLS 313
LL+
Sbjct: 328 ASTLLN 333
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 148 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 2e-05
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Query: 393 KKFGDIAFRDKDFKNAIEYYSK--LVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQA 450
+K G+ F+ D+ A+ Y++ + + RA +L +E + A +A +A
Sbjct: 32 RKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKA 91
Query: 451 QVCLPEWPTAFYMQALALNKLGMETDA 477
A Y ++ AL KLG A
Sbjct: 92 IEKDGGDVKALYRRSQALEKLGRLDQA 118
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 2e-05
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 112 LGNVRHKRLVNLIGCCAEGDERL-LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIA 170
L V + +V+L E L LV M + H+++ D+ ++ R +Y A
Sbjct: 239 LAKVHSRFIVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP-RAIFYTA 296
Query: 171 Q---ALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP-- 225
Q L+H + +N +Y DL VL D+DG+ R+S GL + G++ + A TP
Sbjct: 297 QIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGF 355
Query: 226 --PEFLRTGRVIPESVIY-SYGTVLLDLLSGKHIPP 258
PE L G SV Y + G L ++++ + P
Sbjct: 356 MAPELLL-GEEYDFSVDYFALGVTLYEMIAAR--GP 388
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 3e-05
Identities = 38/164 (23%), Positives = 64/164 (39%), Gaps = 18/164 (10%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVT---EAAGLGNVRHKRLVNLIGCCAEGDE 132
VV++ R ++VAIK+F +S DP E L ++H LVNL+
Sbjct: 18 VVFKCRNRDTGQIVAIKKF-LESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRR 76
Query: 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQNRKLYHDLNA 189
LV +Y + + L D+ + V Q A++ C+ + ++ D+
Sbjct: 77 LHLVFEYCDHT-VLHEL---DRYQRGVPEHL-VKSITWQTLQAVNFCHK-HNCIHRDVKP 130
Query: 190 YRVLFDEDGDPRLSSFGLMKNSRD-GKSYSTNLA---YTPPEFL 229
+L + +L FG + Y +A Y PE L
Sbjct: 131 ENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELL 174
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 5e-05
Identities = 33/201 (16%), Positives = 68/201 (33%), Gaps = 43/201 (21%)
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYY----IAQALDHCNSQNRKLYHDL---NAY 190
Q + L + +++ + V + IA+A++ +S+ ++ DL N
Sbjct: 141 QLCRKENLKDWM---NRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG-LMHRDLKPSN-- 194
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVI------PESV----- 239
+ F D ++ FGL+ + T L P TG+V PE +
Sbjct: 195 -IFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNY 253
Query: 240 -----IYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA---NEDATQLV 291
I+S G +L +LL + ++ ++ + Q
Sbjct: 254 SHKVDIFSLGLILFELLYSF--STQM--------ERVRIITDVRNLKFPLLFTQKYPQEH 303
Query: 292 ELASKCLQYEAKDRPDVKFLL 312
+ L +RP+ ++
Sbjct: 304 MMVQDMLSPSPTERPEATDII 324
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 8e-05
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 14/164 (8%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
VY+G VA+K + + P + E + + ++H+ +V L ++
Sbjct: 20 TVYKGLNKTTGVYVALKEV-KLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKL 78
Query: 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR-VAYYIAQ---ALDHCNSQNRKLYHDLNA 189
LV ++M ND L K++ P + + V Y+ Q L C+ N+ L+ DL
Sbjct: 79 TLVFEFMDND-LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE-NKILHRDLKP 136
Query: 190 YRVLFDEDGDPRLSSFGLMKN-SRDGKSYSTN---LAYTPPEFL 229
+L ++ G +L FGL + ++S+ L Y P+ L
Sbjct: 137 QNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVL 180
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 44.3 bits (104), Expect = 9e-05
Identities = 38/201 (18%), Positives = 66/201 (32%), Gaps = 20/201 (9%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVT-EAAGLGNVRHKRLVNLI------GCCA 128
V R VAIK+ ++ P + E + + H +V+ A
Sbjct: 29 YVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLA 88
Query: 129 EGDERLLVAQYMPNDTLSKHLF-HWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-D 186
D LL +Y L K+L + L + I+ AL + + + H D
Sbjct: 89 PNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR--IIHRD 146
Query: 187 LNAYRVLFDEDGDPR---LSSFGLMKNSRDGKSYSTN---LAYTPPEFLRTGRVIPESVI 240
L ++ + G K G+ + L Y PE L +
Sbjct: 147 LKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDY 206
Query: 241 YSYGTVLLDLLSGKHIPPSHA 261
+S+GT+ + ++G P
Sbjct: 207 WSFGTLAFECITGF--RPFLP 225
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A Length = 131 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 1e-04
Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Query: 393 KKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVR-RALSYLMIEQAELALRDAMQAQ 451
K+ G+ A++ KDF A+++Y K + P+ ++ +A Y +A
Sbjct: 8 KELGNDAYKKKDFDTALKHYDK--AKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAI 65
Query: 452 VCLPEWPTAFYMQALALNKLG 472
E + A A ++G
Sbjct: 66 EVGRENREDYRQIAKAYARIG 86
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.1 bits (103), Expect = 1e-04
Identities = 60/417 (14%), Positives = 114/417 (27%), Gaps = 120/417 (28%)
Query: 140 MPNDTLSK----HLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLY------HDLNA 189
MP LSK H+ ++ + Q + +N
Sbjct: 41 MPKSILSKEEIDHII---MSKDA-VSGTLRLFWTL-----LSKQEEMVQKFVEEVLRIN- 90
Query: 190 YRVLFD----EDGDPRLSSFGLMKNSRDGKSYSTNLAYTP-----PEF---LRTG--RVI 235
Y+ L E P + + + RD + Y+ N + + LR +
Sbjct: 91 YKFLMSPIKTEQRQPSMMT-RMYIEQRD-RLYNDNQVFAKYNVSRLQPYLKLRQALLELR 148
Query: 236 PESVIYSYG------TVLLDLLSGKHIPPSHALDVIRGKNLLLLMDS-----SLEGQYAN 284
P + G T + ALDV + MD +L N
Sbjct: 149 PAKNVLIDGVLGSGKTWV-------------ALDVCLSYKVQCKMDFKIFWLNL-KNC-N 193
Query: 285 EDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSKAP------VV 338
T L L Q + P+ + ++ + L L K+ +V
Sbjct: 194 SPETVLEMLQKLLYQID----PNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV 249
Query: 339 L-----PTMLSSLGKACARMDLT----AVHDILLKTGYKDEEGAENELSFQE-------- 381
L ++ +C ++ LT V D L + ++
Sbjct: 250 LLNVQNAKAWNAFNLSC-KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL 308
Query: 382 -WTQQVQDML-------NTKKFGDIAFRDKDFKNAIEYY-----SKLVSMMSVPSGTVFV 428
+ L N ++ IA +D + + KL +++
Sbjct: 309 KYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIES------- 361
Query: 429 RRALSYLMIEQAELALRDAMQAQVCLPE--WPTAFYMQALALNKLGMETDAQDMLND 483
S ++E AE R P + + + + ++D ++N
Sbjct: 362 ----SLNVLEPAE--YRKMFDRLSVFPPSAHIPTILLSLIWFDVI--KSDVMVVVNK 410
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.4 bits (96), Expect = 7e-04
Identities = 49/316 (15%), Positives = 80/316 (25%), Gaps = 110/316 (34%)
Query: 106 VTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY--MPNDTLSK---------------- 147
VT+ H L + + + L+ +Y L +
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAES 336
Query: 148 ---HLFHWD--KQPLPWEMRVRVAYYIAQALDHCNSQN-RKLYHDLNAYRVLFDED---- 197
L WD K ++ + I +L+ RK++ L +F
Sbjct: 337 IRDGLATWDNWKHVNCDKLT-TI---IESSLNVLEPAEYRKMFDRL----SVFPPSAHIP 388
Query: 198 -------------GDPRLSSFGLMKNS---RDGKSYSTNL-------------------- 221
D + L K S + K + ++
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRS 448
Query: 222 ---AYTPPEFLRTGRVIPESV---IYSY-G----------------TVLLDL--LSGKHI 256
Y P+ + +IP + YS+ G V LD L K
Sbjct: 449 IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIR 508
Query: 257 PPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVA 316
S A + G L L Y + +YE + FL
Sbjct: 509 HDSTAWNA-SGSILNTLQQLKFYKPY----------ICDNDPKYERLVNAILDFLPKIEE 557
Query: 317 PL--QKQTEVASHVLM 330
L K T++ LM
Sbjct: 558 NLICSKYTDLLRIALM 573
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 18/189 (9%)
Query: 77 VVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
VY+G+ K + LVA+K R + P + E + L +++H +V L
Sbjct: 17 TVYKGKSKLTDNLVALKEI-RLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSL 75
Query: 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQNRKLYHDLNAY 190
LV +Y+ D L ++L D M V ++ Q L +C+ + L+ DL
Sbjct: 76 TLVFEYLDKD-LKQYL---DDCGNIINMHN-VKLFLFQLLRGLAYCHR-QKVLHRDLKPQ 129
Query: 191 RVLFDEDGDPRLSSFGLMKN-SRDGKSYSTN---LAYTPPEFLRTGRVIPESV-IYSYGT 245
+L +E G+ +L+ FGL + S K+Y L Y PP+ L + ++ G
Sbjct: 130 NLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGC 189
Query: 246 VLLDLLSGK 254
+ ++ +G+
Sbjct: 190 IFYEMATGR 198
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 396 GDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLP 455
G+ FR+K + +AI+YY+ + + + + Y+ + + + + +A P
Sbjct: 13 GNQFFRNKKYDDAIKYYNWALEL--KEDPVFYSNLSACYVSVGDLKKVVEMSTKALELKP 70
Query: 456 EWPTAFYMQALALNKLGMETDA 477
++ +A A LG DA
Sbjct: 71 DYSKVLLRRASANEGLGKFADA 92
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 44/216 (20%), Positives = 75/216 (34%), Gaps = 46/216 (21%)
Query: 169 IAQALDHCNSQNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYST---NLAYT 224
I A+ +C+ + + H DL A +L D D + +++ FG G Y
Sbjct: 123 IVSAVQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYA 180
Query: 225 PPEFLR----TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEG 280
PE + G PE ++S G +L L+SG +P G+NL L + L G
Sbjct: 181 APELFQGKKYDG---PEVDVWSLGVILYTLVSG-SLP-------FDGQNLKELRERVLRG 229
Query: 281 QYA-----NEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVASHVLMGLSKA 335
+Y + D L+ + L R ++ ++ +
Sbjct: 230 KYRIPFYMSTDCENLL---KRFLVLNPIKRGTLE-------------QIMKDRWINAGHE 273
Query: 336 PVVLPTMLSSLGKACARMDLTAVHDILLKTGYKDEE 371
L + + DI++ GY EE
Sbjct: 274 EDELKPFVEPE----LDISDQKRIDIMVGMGYSQEE 305
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 38/179 (21%), Positives = 65/179 (36%), Gaps = 37/179 (20%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAA--------GLGNVRHKRLVNLI--- 124
VY+ R + VA+K + + + L H +V L+
Sbjct: 24 TVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVC 83
Query: 125 -GCCAEGDERL-LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQ 179
+ + ++ LV +++ D L +L DK P P + + Q LD ++
Sbjct: 84 ATSRTDREIKVTLVFEHVDQD-LRTYL---DKAPPPGLPAETIKDLMRQFLRGLDFLHA- 138
Query: 180 NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYT---------PPEFL 229
N ++ DL +L G +L+ FGL + YS +A T PE L
Sbjct: 139 NCIVHRDLKPENILVTSGGTVKLADFGL------ARIYSYQMALTPVVVTLWYRAPEVL 191
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 2e-04
Identities = 43/201 (21%), Positives = 77/201 (38%), Gaps = 28/201 (13%)
Query: 78 VYRGRLKN-NRLVAIKRFSRQ---SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
V ++K ++ A+K ++ + F E L N + + L + +
Sbjct: 77 VAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLH-FAFQDENY 135
Query: 134 L-LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQNRKLYHDLNA 189
L LV +Y L L + ++ +P R +Y+A+ A+D + ++ D+
Sbjct: 136 LYLVMEYYVGGDLLTLLSKFGER-IP-AEMAR--FYLAEIVMAIDSVHRLG-YVHRDIKP 190
Query: 190 YRVLFDEDGDPRLSSFGL-MKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIY--- 241
+L D G RL+ FG +K DG S TP PE L+ P + Y
Sbjct: 191 DNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPE 250
Query: 242 ----SYGTVLLDLLSGKHIPP 258
+ G ++ G+ P
Sbjct: 251 CDWWALGVFAYEMFYGQ--TP 269
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 Length = 198 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 3e-04
Identities = 21/128 (16%), Positives = 40/128 (31%), Gaps = 18/128 (14%)
Query: 376 ELSFQEWTQQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSG----------- 424
+ + +E Q D+ K+ G+ F+ + AI Y + +
Sbjct: 28 DYTDEEKVQSAFDI---KEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKK 84
Query: 425 ----TVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDM 480
+ + A Y + A+ A + A Y +A G +A++
Sbjct: 85 NIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKEN 144
Query: 481 LNDGASFE 488
L AS
Sbjct: 145 LYKAASLN 152
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 3e-04
Identities = 50/251 (19%), Positives = 91/251 (36%), Gaps = 39/251 (15%)
Query: 77 VVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
V + + + + A+K ++ S D + E L + H ++ L +
Sbjct: 37 EVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF 96
Query: 134 LLVAQYMPNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAY 190
+V + LF ++ R+ + + + + N + H DL
Sbjct: 97 YIVGELYT----GGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN--IVHRDLKPE 150
Query: 191 RVLF---DEDGDPRLSSFGLMKNSRDGKSYSTNL---AYTPPEFLRTGRVIPESVIYSYG 244
+L ++D D ++ FGL + + Y PE LR G + ++S G
Sbjct: 151 NILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAG 209
Query: 245 TVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA---------NEDATQLVELAS 295
+L LLSG PP + GKN ++ G+YA ++DA L+
Sbjct: 210 VILYILLSG--TPPFY------GKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI---R 258
Query: 296 KCLQYEAKDRP 306
K L + R
Sbjct: 259 KMLTFHPSLRI 269
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 4e-04
Identities = 47/259 (18%), Positives = 82/259 (31%), Gaps = 50/259 (19%)
Query: 77 VVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
VV+R + A K D E + +RH LVNL + +E ++
Sbjct: 172 VVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM 231
Query: 136 VAQYMPN----DTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQNRKLYH-DL 187
+ ++M + ++ + Y+ Q L H + N H DL
Sbjct: 232 IYEFMSGGELFEKVADEHNKMSED--------EAVEYMRQVCKGLCHMHENN--YVHLDL 281
Query: 188 ---NAYRVLFDEDGDPRL--SSFGLMKNSRDGKSYSTNLA---YTPPEFLRTGRVIPESV 239
N ++F L FGL + +S + PE V +
Sbjct: 282 KPEN---IMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTD 338
Query: 240 IYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY---------ANEDATQL 290
++S G + LLSG + P G+N + + + +ED
Sbjct: 339 MWSVGVLSYILLSG--LSP------FGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDF 390
Query: 291 VELASKCLQYEAKDRPDVK 309
+ K L + R +
Sbjct: 391 I---RKLLLADPNTRMTIH 406
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 4e-04
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 1/93 (1%)
Query: 385 QVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELAL 444
+ +M + AF D+ AI + K++ + V + RA ++ + A+
Sbjct: 116 KADEMQRLRSQALDAFDGADYTAAITFLDKILEV-CVWDAELRELRAECFIKEGEPRKAI 174
Query: 445 RDAMQAQVCLPEWPTAFYMQALALNKLGMETDA 477
D A + AFY + +LG +
Sbjct: 175 SDLKAASKLKSDNTEAFYKISTLYYQLGDHELS 207
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 4e-04
Identities = 19/103 (18%), Positives = 37/103 (35%), Gaps = 1/103 (0%)
Query: 380 QEWTQQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQ 439
Q + +M + AF D+ AI + K++ + V + RA ++ +
Sbjct: 134 QSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEV-CVWDAELRELRAECFIKEGE 192
Query: 440 AELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLN 482
A+ D A + AFY + +LG + +
Sbjct: 193 PRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVR 235
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 5e-04
Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 3/88 (3%)
Query: 396 GDIAFRDKDFKNAIEYYSKLVSMMSVP-SGTVFVRRALSYLMIEQAELALRDAMQAQVCL 454
G +A+ + V P + + RRA +L + +++ AL D +
Sbjct: 33 GKKLLAAGQLADALSQFHAAVDG--DPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLK 90
Query: 455 PEWPTAFYMQALALNKLGMETDAQDMLN 482
++ A + L K G +A+D
Sbjct: 91 MDFTAARLQRGHLLLKQGKLDEAEDDFK 118
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} Length = 111 | Back alignment and structure |
|---|
Score = 38.8 bits (91), Expect = 5e-04
Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Query: 393 KKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVR-RALSYLMIEQAELALRDAMQAQ 451
K+ G+ F+ ++ A+ Y +L++ P V +A++ + + + A++ Q
Sbjct: 8 KEQGNSLFKQGLYREAVHCYDQLITAQ--PQNPVGYSNKAMALIKLGEYTQAIQMCQQGL 65
Query: 452 VCLPEWPTAFYMQALALNKLGMETDA 477
L +L + A
Sbjct: 66 RYTSTAEHVAIRSKLQY-RLELAQGA 90
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 5e-04
Identities = 45/201 (22%), Positives = 71/201 (35%), Gaps = 33/201 (16%)
Query: 78 VYRGRLK-NNRLVAIKRFSRQSWPDPHQ---FVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
V R K ++ A+K S+ F E + +V L + D
Sbjct: 85 VQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF-YAFQDDRY 143
Query: 134 L-LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQNRKLYHDLNA 189
L +V +YMP L + +P E R +Y A+ ALD +S ++ D+
Sbjct: 144 LYMVMEYMPGGDL---VNLMSNYDVP-EKWAR--FYTAEVVLALDAIHSMG-FIHRDVKP 196
Query: 190 YRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA-----YTPPEFLRTGRVIPESVIY--- 241
+L D+ G +L+ FG + A Y PE L++ Y
Sbjct: 197 DNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ---GGDGYYGRE 253
Query: 242 ----SYGTVLLDLLSGKHIPP 258
S G L ++L G P
Sbjct: 254 CDWWSVGVFLYEMLVGD--TP 272
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 5e-04
Identities = 39/166 (23%), Positives = 65/166 (39%), Gaps = 19/166 (11%)
Query: 77 VVYRGR-LKNNRLVAIKRF---SRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEG 130
VY+ R N++VAIK+ R D + E L + H ++ L+
Sbjct: 25 TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK 84
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQNRKLYHDL 187
LV +M D L + L + Y+ L++ + + L+ DL
Sbjct: 85 SNISLVFDFMETD-LEVII---KDNSLVLTPSH-IKAYMLMTLQGLEYLHQ-HWILHRDL 138
Query: 188 NAYRVLFDEDGDPRLSSFGLMKNSRD-GKSYSTN---LAYTPPEFL 229
+L DE+G +L+ FGL K+ ++Y+ Y PE L
Sbjct: 139 KPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELL 184
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 6e-04
Identities = 50/252 (19%), Positives = 86/252 (34%), Gaps = 40/252 (15%)
Query: 77 VVYRGRLK-NNRLVAIKRFSRQSWP---DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
V + K + A+K S++ D + E L + H ++ L +
Sbjct: 41 EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGY 100
Query: 133 RLLVAQYMPNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNA 189
LV + LF ++ R+ + + + + + H DL
Sbjct: 101 FYLVGEVYT----GGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK--IVHRDLKP 154
Query: 190 YRVLF---DEDGDPRLSSFGLMKNSRDGKSYSTNL---AYTPPEFLRTGRVIPESVIYSY 243
+L +D + R+ FGL + K + Y PE L G + ++S
Sbjct: 155 ENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWST 213
Query: 244 GTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA---------NEDATQLVELA 294
G +L LLSG PP + G N ++ +G+Y +E A L+
Sbjct: 214 GVILYILLSGC--PPFN------GANEYDILKKVEKGKYTFELPQWKKVSESAKDLI--- 262
Query: 295 SKCLQYEAKDRP 306
K L Y R
Sbjct: 263 RKMLTYVPSMRI 274
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 8e-04
Identities = 60/279 (21%), Positives = 106/279 (37%), Gaps = 62/279 (22%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL-- 134
VV++ +L + VAIK+ Q D E + V+H +V+L ++
Sbjct: 55 VVFQAKLVESDEVAIKKV-LQ---DKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDE 110
Query: 135 ----LVAQYMPNDTLSKHLFHWDK--QPLPWEMRVRV-AYYIAQALDHCNSQNRKLYH-D 186
LV +Y+P +T+ + H+ K Q +P + +++ Y + ++L + +S + H D
Sbjct: 111 VFLNLVLEYVP-ETVYRASRHYAKLKQTMP-MLLIKLYMYQLLRSLAYIHSIG--ICHRD 166
Query: 187 LNAYRVLFDEDGDP-RLSSFGLMKNSRDGK---SYSTNLAYTPPEFLRTGRVIPESV-IY 241
+ +L D +L FG K G+ SY + Y PE + ++ I+
Sbjct: 167 IKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIW 226
Query: 242 SYGTVLLDLLSGK-------------HI-----PPS-------------HALDVIRGKNL 270
S G V+ +L+ G+ I PS H IR
Sbjct: 227 STGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPF 286
Query: 271 LLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVK 309
S + DA ++L S+ L+Y R
Sbjct: 287 -----SKVFRPRTPPDA---IDLISRLLEYTPSARLTAI 317
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 497 | |||
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.97 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.94 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.91 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.86 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.84 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.83 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.83 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.81 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.8 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.78 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.78 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.77 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.77 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.76 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.76 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.76 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.75 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.75 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.75 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.74 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.74 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.73 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.73 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.73 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.73 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.72 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.71 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.69 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.69 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.69 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.68 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.68 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 99.67 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.66 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.66 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.66 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.65 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.65 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 99.64 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.63 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.62 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.62 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 99.61 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.61 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.61 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.6 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.6 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.6 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.6 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.59 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.59 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.59 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 99.59 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 99.59 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.59 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.59 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.58 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.58 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.58 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.58 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.57 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.57 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.57 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.57 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.57 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.57 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.57 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.56 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.56 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.56 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.56 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.55 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.55 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.55 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.55 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.55 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.55 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.54 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.54 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.54 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.54 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 99.54 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.53 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.53 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.53 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 99.52 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.52 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.52 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.52 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.52 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.52 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.51 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.51 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.51 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.51 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.51 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.51 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.51 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.5 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.5 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.5 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.49 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.49 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.49 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.48 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.48 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.47 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.47 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.47 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.46 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.46 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.46 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 99.46 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.44 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.44 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 99.44 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.44 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.44 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.43 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.43 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 99.43 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.43 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 99.42 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.42 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.41 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.41 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.41 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.41 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.41 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.41 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 99.41 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.4 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 99.4 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.4 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.39 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 99.39 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 99.39 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 99.39 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.39 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 99.38 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.38 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 99.38 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 99.38 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.37 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 99.37 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 99.37 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 99.37 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 99.37 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.36 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.36 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 99.36 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.36 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.35 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 99.35 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 99.35 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 99.35 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.35 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 99.33 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 99.32 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.32 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 99.32 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 99.32 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 99.32 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 99.29 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 99.29 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.29 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 99.28 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 99.28 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 99.27 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.27 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 99.25 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 99.24 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 99.23 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.22 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 99.22 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 99.2 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 99.19 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 99.19 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 99.19 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 99.17 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.16 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.16 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 99.14 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 99.13 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.13 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 99.09 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 99.05 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 99.04 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 99.03 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.02 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 99.02 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 99.02 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.99 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.98 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.97 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.94 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.91 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.91 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.88 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.88 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.83 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 98.82 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.82 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 98.78 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.77 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.74 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 98.73 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.72 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 98.65 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.65 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 98.64 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 98.63 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.62 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 98.61 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 98.6 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.55 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.55 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 98.51 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.51 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.48 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.41 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 98.37 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.36 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.36 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 98.35 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 98.31 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 98.29 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 98.28 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 98.26 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 98.18 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 98.17 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 98.15 | |
| 3ffl_A | 167 | Anaphase-promoting complex subunit 7; tetratricope | 97.91 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.9 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.9 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 97.83 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 97.8 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 97.76 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.73 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 97.68 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 97.59 | |
| 4e6h_A | 679 | MRNA 3'-END-processing protein RNA14; HAT domain, | 97.51 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 97.5 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.44 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 97.43 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 97.41 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.4 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.33 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.3 | |
| 4e6h_A | 679 | MRNA 3'-END-processing protein RNA14; HAT domain, | 97.28 |
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-60 Score=512.62 Aligned_cols=412 Identities=14% Similarity=0.092 Sum_probs=322.9
Q ss_pred CcccccccCCCCCCcEEEEEEEc--CCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCc-----e
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK--NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE-----R 133 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-----~ 133 (497)
..|.+++.||+|+||+||++.+. +|+.||||++..... ...+.+.+|+.+|++++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 56788899999999999999985 589999999875432 224578999999999999999999999988665 6
Q ss_pred EEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC
Q 010932 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD 213 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 213 (497)
+|||||++|++|.+++. ..+++..+..|+.||+.||.|||+++ |+||||||+|||++.+ .+||+|||+++....
T Consensus 160 ~lv~E~~~g~~L~~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~g-iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYLHSIG-LVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EEEEECCCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred EEEEEeCCCCcHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC-CeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 99999999999998773 37999999999999999999999999 9999999999999975 899999999998777
Q ss_pred CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHH
Q 010932 214 GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVEL 293 (497)
Q Consensus 214 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 293 (497)
.....||+.|+|||++.++. +.++|||||||++|+|++|..|+..... ..+ .........++.+.+|
T Consensus 234 ~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~--------~~~----~~~~~~~~~~~~l~~l 300 (681)
T 2pzi_A 234 FGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV--------DGL----PEDDPVLKTYDSYGRL 300 (681)
T ss_dssp CSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC--------SSC----CTTCHHHHHCHHHHHH
T ss_pred CCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc--------ccc----cccccccccCHHHHHH
Confidence 77788999999999998654 8899999999999999999866532110 000 0011112345679999
Q ss_pred HHHhcccCCCCCC-CHHHHHHHhhhhhccccchhhhhccCCCCCc-----------------------------------
Q 010932 294 ASKCLQYEAKDRP-DVKFLLSAVAPLQKQTEVASHVLMGLSKAPV----------------------------------- 337 (497)
Q Consensus 294 i~~cl~~dp~~Rp-s~~~ll~~l~~~~~~~~~~~~~~~~~~~~~~----------------------------------- 337 (497)
|.+||+.||++|| +++++...|..+........... ..+....
T Consensus 301 i~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (681)
T 2pzi_A 301 LRRAIDPDPRQRFTTAEEMSAQLTGVLREVVAQDTGV-PRPGLSTIFSPSRSTFGVDLLVAHTDVYLDGQVHAEKLTANE 379 (681)
T ss_dssp HHHHTCSSGGGSCSSHHHHHHHHHHHHHHHHHHHHSC-CCCCCCSSBCCCSSCCSSSHHHHGGGHHHHCCCCCCCCCHHH
T ss_pred HhhhccCChhhCCCHHHHHHHHHHHHHHHhhccccCC-CCCcccccCCcccccccchhhhhhcccccccccccccCCHHH
Confidence 9999999999999 56666666665532211000000 0000000
Q ss_pred ---------cCCccCC-------cchhhhhc----------------cchhHHHHHHHHhccccccccchhhhhhHHHHH
Q 010932 338 ---------VLPTMLS-------SLGKACAR----------------MDLTAVHDILLKTGYKDEEGAENELSFQEWTQQ 385 (497)
Q Consensus 338 ---------~~p~~~~-------~~~~~~~~----------------~~~~~~~~~~~~~g~~~~~~~~~e~a~~~~~~~ 385 (497)
..|.... ...+...+ ..-+...+.+..+|..+...|++++|++.|+++
T Consensus 380 ~~~~L~~p~~~p~~~~a~~~~a~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~a 459 (681)
T 2pzi_A 380 IVTALSVPLVDPTDVAASVLQATVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDL 459 (681)
T ss_dssp HHHHSCCBCCCTTSTTHHHHHHTTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHhhCCCccCCCCCcchHHhhcccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 0000000 00000000 000223356677888888999999999999998
Q ss_pred H----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHH
Q 010932 386 V----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAF 461 (497)
Q Consensus 386 ~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 461 (497)
+ +++.+++.+|.+++..|+|++|+..|++|++ ++|+++.+|+++|.++.++|+|++ +..|++|++++|+++.+|
T Consensus 460 l~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~-l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~ 537 (681)
T 2pzi_A 460 AERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLD-TFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAA 537 (681)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHH
T ss_pred hccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHH
Confidence 8 5788999999999999999999999999999 999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 462 YMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 462 ~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
+++|.+|..+|++++|+++|++|++++|++..+|
T Consensus 538 ~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~ 571 (681)
T 2pzi_A 538 FGLARARSAEGDRVGAVRTLDEVPPTSRHFTTAR 571 (681)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHH
Confidence 9999999999999999999999999999987765
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-58 Score=438.38 Aligned_cols=256 Identities=21% Similarity=0.267 Sum_probs=206.9
Q ss_pred CCCcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
.+++..+.++||+|+||+||+|++++ .||||+++..... ..+.|.+|+.+|++++|||||+++|++.+ +..+|||
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 34566778899999999999999753 5999999754332 24679999999999999999999998865 5689999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC----
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD---- 213 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 213 (497)
|||+||+|.++|... ...+++..+..|+.||+.||.|||+++ ||||||||+||||++++++||+|||+|+....
T Consensus 111 Ey~~gGsL~~~l~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKN-IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp ECCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred EcCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 999999999999653 467999999999999999999999999 99999999999999999999999999986432
Q ss_pred --CCccccCCCCCCcccccc---CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHH
Q 010932 214 --GKSYSTNLAYTPPEFLRT---GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288 (497)
Q Consensus 214 --~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (497)
.....||+.|||||++.+ +.|+.++|||||||+||||+||+.||............+..-.........+..++.
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 268 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPK 268 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCH
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchH
Confidence 134579999999999964 458999999999999999999999986532211111111111111112234556788
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
.+.+|+.+||+.||++|||+.+|+++|+.++.
T Consensus 269 ~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 269 AMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp HHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 89999999999999999999999999988863
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-59 Score=444.99 Aligned_cols=253 Identities=24% Similarity=0.300 Sum_probs=213.4
Q ss_pred cccccccCCCCCCcEEEEEEEc------CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK------NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
++.+.++||+|+||+||+|.+. ++..||||+++.......+.|.+|+++|++++|||||+++|+|.+++..+||
T Consensus 14 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 93 (299)
T 4asz_A 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV 93 (299)
T ss_dssp GEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence 4556788999999999999864 3788999999866544467899999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcC-----------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEccc
Q 010932 137 AQYMPNDTLSKHLFHW-----------DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSF 205 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~-----------~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Df 205 (497)
||||++|+|.++|... ....+++..+..|+.||+.||.|||+++ ||||||||+|||++.++++||+||
T Consensus 94 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDlKp~NILl~~~~~~Ki~DF 172 (299)
T 4asz_A 94 FEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDF 172 (299)
T ss_dssp EECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCC
T ss_pred EEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccCHhhEEECCCCcEEECCc
Confidence 9999999999999753 2357999999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhcccccccccccc
Q 010932 206 GLMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSL 278 (497)
Q Consensus 206 gla~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (497)
|+|+..... ....||+.|||||++.+..++.++|||||||+||||+| |+.||.......+. ..+....
T Consensus 173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~-----~~i~~~~ 247 (299)
T 4asz_A 173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI-----ECITQGR 247 (299)
T ss_dssp SCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH-----HHHHHTC
T ss_pred ccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH-----HHHHcCC
Confidence 999854332 23468999999999999999999999999999999999 88888654332221 1122222
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 279 EGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 279 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
....|..+++++.+|+.+||+.||++|||+.+|++.|+.+.+.
T Consensus 248 ~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 248 VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 3345677888999999999999999999999999999887653
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-58 Score=447.93 Aligned_cols=254 Identities=21% Similarity=0.288 Sum_probs=210.7
Q ss_pred cccccccCCCCCCcEEEEEEEc------CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK------NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
+..+.++||+|+||+||+|.++ +++.||||+++.......+.|.+|+++|++++|||||+++|+|.+.+..+||
T Consensus 42 d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 121 (329)
T 4aoj_A 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMV 121 (329)
T ss_dssp GEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 3455678999999999999864 3789999999865544467899999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEc
Q 010932 137 AQYMPNDTLSKHLFHWD-------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLS 203 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~-------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~ 203 (497)
||||++|+|.++|+... ..++++..++.|+.||+.||.|||+++ ||||||||+||||+.++++||+
T Consensus 122 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLKp~NILl~~~~~~Ki~ 200 (329)
T 4aoj_A 122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATRNCLVGQGLVVKIG 200 (329)
T ss_dssp EECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEEC
T ss_pred EEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHhhEEECCCCcEEEc
Confidence 99999999999997532 246999999999999999999999999 9999999999999999999999
Q ss_pred ccCCccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhcccccccccc
Q 010932 204 SFGLMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDS 276 (497)
Q Consensus 204 Dfgla~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~ 276 (497)
|||+++..... ....||+.|||||++.+..++.++|||||||+||||+| |+.||.......+. ..+..
T Consensus 201 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~-----~~i~~ 275 (329)
T 4aoj_A 201 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI-----DCITQ 275 (329)
T ss_dssp CCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHH-----HHHHH
T ss_pred ccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHH-----HHHHc
Confidence 99999864332 24568999999999999999999999999999999999 88888654332221 11112
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhccc
Q 010932 277 SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQT 322 (497)
Q Consensus 277 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~ 322 (497)
..+.+.|..+++++.+|+.+||+.||++|||+.+|+++|+.+.+.+
T Consensus 276 g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 276 GRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred CCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 2234556778889999999999999999999999999999987654
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-58 Score=442.00 Aligned_cols=251 Identities=21% Similarity=0.260 Sum_probs=212.9
Q ss_pred CcccccccCCCCCCcEEEEEEEc------CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK------NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 134 (497)
+..+++++||+|+||+||+|.+. +++.||||+++..... ..+.|.+|+.+|++++|||||+++|+|.+.+..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 44567888999999999999863 3679999999765332 3578999999999999999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCe
Q 010932 135 LVAQYMPNDTLSKHLFHWD--------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDP 200 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~ 200 (497)
||||||++|+|.++|.... ...+++..+..|+.||+.||.|||+++ ||||||||+||||++++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLK~~NILl~~~~~~ 184 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-VVHKDLATRNVLVYDKLNV 184 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCE
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCccccceEECCCCCE
Confidence 9999999999999996432 246999999999999999999999999 9999999999999999999
Q ss_pred eEcccCCccccCC------CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccc
Q 010932 201 RLSSFGLMKNSRD------GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLL 273 (497)
Q Consensus 201 kl~Dfgla~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~ 273 (497)
||+|||+++.... .....||+.|||||++.++.++.++|||||||+||||+| |+.||.......+ ...
T Consensus 185 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~-----~~~ 259 (308)
T 4gt4_A 185 KISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV-----VEM 259 (308)
T ss_dssp EECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHH-----HHH
T ss_pred EECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHH-----HHH
Confidence 9999999985422 234578999999999999999999999999999999999 7888765433222 122
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhh
Q 010932 274 MDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 274 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
+......+.|..++..+.+|+.+||+.||++|||+.+|+++|+.+
T Consensus 260 i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 260 IRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 222333456677888999999999999999999999999999865
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-58 Score=446.27 Aligned_cols=247 Identities=19% Similarity=0.237 Sum_probs=208.5
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
+.|.++++||+|+||+||+|+++ +|+.||||++....... .+.+.+|+++|++++|||||++++++.+++..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 57899999999999999999976 59999999997654322 4679999999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---- 214 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 214 (497)
||+||+|.++|.......+++..++.|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 182 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA 182 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHH
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCCEEEcccccceeecCCcccc
Confidence 999999999997655677899999999999999999999999 999999999999999999999999999876543
Q ss_pred CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHH
Q 010932 215 KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 294 (497)
...+||+.|||||++.+..|+.++|||||||+||||+||+.||.......+... +.... ....+..++.++.+||
T Consensus 183 ~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~----i~~~~-~~~~~~~~s~~~~~li 257 (350)
T 4b9d_A 183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLK----IISGS-FPPVSLHYSYDLRSLV 257 (350)
T ss_dssp HHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH----HHHTC-CCCCCTTSCHHHHHHH
T ss_pred cccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH----HHcCC-CCCCCccCCHHHHHHH
Confidence 245799999999999999999999999999999999999999976543332221 11111 1234556778899999
Q ss_pred HHhcccCCCCCCCHHHHHHH
Q 010932 295 SKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 295 ~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+||+.||++|||+.+++++
T Consensus 258 ~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 258 SQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp HHHTCSSGGGSCCHHHHHTS
T ss_pred HHHccCChhHCcCHHHHhcC
Confidence 99999999999999999985
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-57 Score=440.52 Aligned_cols=245 Identities=18% Similarity=0.239 Sum_probs=211.6
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
.|.++++||+|+||+||+|.++ +|+.||||++........+.+.+|+.+|+.++|||||++++++.+.+..|||||||+
T Consensus 75 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~ 154 (346)
T 4fih_A 75 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 154 (346)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred hcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 4788899999999999999986 599999999987666667789999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----Ccc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KSY 217 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 217 (497)
||+|.+++.. ..+++..+..|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+|+..... .+.
T Consensus 155 gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~ 230 (346)
T 4fih_A 155 GGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL 230 (346)
T ss_dssp TEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCC
T ss_pred CCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEECCCCCEEEecCcCceecCCCCCccccc
Confidence 9999999964 56999999999999999999999999 999999999999999999999999999865432 457
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHh
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKC 297 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 297 (497)
+||+.|||||++.+..|+.++|||||||++|||++|+.||........... +..... .....+...++++.+||.+|
T Consensus 231 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~-i~~~~~--~~~~~~~~~s~~~~dli~~~ 307 (346)
T 4fih_A 231 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM-IRDNLP--PRLKNLHKVSPSLKGFLDRL 307 (346)
T ss_dssp CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-HHHSSC--CCCSCGGGSCHHHHHHHHHH
T ss_pred ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HHcCCC--CCCCccccCCHHHHHHHHHH
Confidence 899999999999999999999999999999999999999876433222111 111111 11123355778899999999
Q ss_pred cccCCCCCCCHHHHHHH
Q 010932 298 LQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 298 l~~dp~~Rps~~~ll~~ 314 (497)
|+.||++|||+.++++|
T Consensus 308 L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 308 LVRDPAQRATAAELLKH 324 (346)
T ss_dssp SCSSTTTSCCHHHHTTC
T ss_pred cCCChhHCcCHHHHhcC
Confidence 99999999999999986
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-57 Score=437.38 Aligned_cols=250 Identities=17% Similarity=0.134 Sum_probs=210.5
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
+..+.+.++||+|+||+||+|+++ +|+.||||+++.... ..+|+.+|+.++|||||++++++.+++..||||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 455677788999999999999986 499999999975432 34799999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC-CeeEcccCCccccCCC----
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG-DPRLSSFGLMKNSRDG---- 214 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~~---- 214 (497)
|+||+|.++|.. .+.+++..+..|+.||+.||.|||+++ ||||||||+||||+.+| .+||+|||+|+.....
T Consensus 132 ~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 132 LEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred cCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 999999999975 467999999999999999999999999 99999999999999988 6999999999865322
Q ss_pred -----CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccc-cccCCCCCHHHHH
Q 010932 215 -----KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMD-SSLEGQYANEDAT 288 (497)
Q Consensus 215 -----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 288 (497)
...+||+.|||||++.+..++.++|||||||+||||+||+.||.......+ ...+.. ......+++.+++
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~s~ 284 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL----CLKIASEPPPIREIPPSCAP 284 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC----HHHHHHSCCGGGGSCTTSCH
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH----HHHHHcCCCCchhcCccCCH
Confidence 235799999999999999999999999999999999999999865422111 111111 1111235566788
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHhhhhhccc
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQT 322 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~ 322 (497)
.+.+||.+||+.||++|||+.|++++|.......
T Consensus 285 ~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 285 LTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999988776543
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-57 Score=431.45 Aligned_cols=244 Identities=18% Similarity=0.171 Sum_probs=210.7
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCC---CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQ---SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
++|.+++.||+|+||+||+|+++ +|+.||||++.+. .....+.+.+|+++|++++|||||++++++.+.+..||||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 35788999999999999999976 5999999999643 2334678999999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 214 (497)
|||+||+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+|+.....
T Consensus 112 Ey~~gG~L~~~i~~--~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 112 SYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp CCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred ecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 99999999999975 568999999999999999999999999 999999999999999999999999999865322
Q ss_pred ---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHH
Q 010932 215 ---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291 (497)
Q Consensus 215 ---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (497)
.+.+||+.|||||++.+..++.++|||||||+||||+||+.||.......+.... ... ...+|...++++.
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i----~~~--~~~~p~~~s~~~~ 262 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKI----IKL--EYDFPEKFFPKAR 262 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----HHT--CCCCCTTCCHHHH
T ss_pred ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----HcC--CCCCCcccCHHHH
Confidence 3568999999999999999999999999999999999999999765433332211 111 1234556778899
Q ss_pred HHHHHhcccCCCCCCCHHHHHHH
Q 010932 292 ELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+||.+||+.||++|||+++++.+
T Consensus 263 dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 263 DLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp HHHHHHSCSSGGGSTTSGGGTCH
T ss_pred HHHHHHccCCHhHCcChHHHcCC
Confidence 99999999999999999987543
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-56 Score=442.17 Aligned_cols=246 Identities=18% Similarity=0.244 Sum_probs=212.1
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
..|.++++||+|+||+||+|.++ +|+.||||++........+.+.+|+.+|+.++|||||+++++|.+.+.+|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 34788899999999999999986 49999999998776666788999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----Cc
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KS 216 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 216 (497)
+||+|.+++.. ..+++..+..|+.||+.||.|||++| ||||||||+||||+.+|.+||+|||+|+..... .+
T Consensus 231 ~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~~-IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 306 (423)
T 4fie_A 231 EGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 306 (423)
T ss_dssp TTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCC
T ss_pred CCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEecCccceECCCCCccccc
Confidence 99999999964 56999999999999999999999999 999999999999999999999999999865432 45
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
.+||+.|||||++.+..|+.++|||||||++|||++|+.||........... +...... ....+..+++++.+||.+
T Consensus 307 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~-i~~~~~~--~~~~~~~~s~~~~dli~~ 383 (423)
T 4fie_A 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM-IRDNLPP--RLKNLHKVSPSLKGFLDR 383 (423)
T ss_dssp CEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-HHHSCCC--CCSCTTSSCHHHHHHHHH
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HHcCCCC--CCcccccCCHHHHHHHHH
Confidence 7899999999999999999999999999999999999999865432222111 1111111 112334567889999999
Q ss_pred hcccCCCCCCCHHHHHHH
Q 010932 297 CLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~ 314 (497)
||+.||++|||+.++|+|
T Consensus 384 ~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 384 LLVRDPAQRATAAELLKH 401 (423)
T ss_dssp HSCSSTTTSCCHHHHTTC
T ss_pred HcCCChhHCcCHHHHhcC
Confidence 999999999999999986
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-56 Score=418.99 Aligned_cols=243 Identities=19% Similarity=0.251 Sum_probs=196.9
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC---CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW---PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
++|.+++.||+|+||+||+|.++ +|+.||||++..... ...+.+.+|+++|+.++|||||++++++.+.+..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 46788999999999999999975 599999999975432 23567999999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 214 (497)
||+ +|+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++++||+|||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~ 168 (275)
T 3hyh_A 93 EYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRHK-IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL 168 (275)
T ss_dssp ECC-CEEHHHHHHH--SCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTCCEEECCSSCC---------
T ss_pred eCC-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCChHHeEECCCCCEEEeecCCCeecCCCCcc
Confidence 999 6899999876 568999999999999999999999999 999999999999999999999999999865433
Q ss_pred CccccCCCCCCccccccCCC-CcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHH
Q 010932 215 KSYSTNLAYTPPEFLRTGRV-IPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVEL 293 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 293 (497)
.+.+||+.|||||++.+..+ +.++|||||||++|+|+||+.||.......+... +... ...+|...++++.+|
T Consensus 169 ~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~----i~~~--~~~~p~~~s~~~~~l 242 (275)
T 3hyh_A 169 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKN----ISNG--VYTLPKFLSPGAAGL 242 (275)
T ss_dssp ------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHT--CCCCCTTSCHHHHHH
T ss_pred CCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHH----HHcC--CCCCCCCCCHHHHHH
Confidence 45789999999999998776 5799999999999999999999976543332211 1111 123455677889999
Q ss_pred HHHhcccCCCCCCCHHHHHHH
Q 010932 294 ASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 294 i~~cl~~dp~~Rps~~~ll~~ 314 (497)
+.+||+.||++|||+.+++++
T Consensus 243 i~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 243 IKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp HHHHSCSSGGGSCCHHHHHHC
T ss_pred HHHHccCChhHCcCHHHHHcC
Confidence 999999999999999999985
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-56 Score=423.40 Aligned_cols=244 Identities=16% Similarity=0.234 Sum_probs=199.2
Q ss_pred cccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeee----CCceEEEE
Q 010932 65 LIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAE----GDERLLVA 137 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~ 137 (497)
++..+||+|+||+||+|.++. +..||||++...... ..+.|.+|+++|++++|||||+++++|.+ ....+|||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 455678999999999999864 899999999754322 24679999999999999999999999865 34589999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CcccccCCCcceEeC-CCCCeeEcccCCccccCCC-
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQN-RKLYHDLNAYRVLFD-EDGDPRLSSFGLMKNSRDG- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~-~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~~- 214 (497)
|||+||+|.+++.. .+.+++..+..|+.||+.||.|||+++ +||||||||+||||+ .+|.+||+|||+|+.....
T Consensus 109 Ey~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~ 186 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF 186 (290)
T ss_dssp ECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred eCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCc
Confidence 99999999999976 568999999999999999999999875 499999999999998 4899999999999865443
Q ss_pred -CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHH
Q 010932 215 -KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVEL 293 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 293 (497)
.+.+||+.|||||++. +.++.++|||||||+||||+||+.||............ +........++...++++.+|
T Consensus 187 ~~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~---i~~~~~~~~~~~~~~~~~~~l 262 (290)
T 3fpq_A 187 AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRR---VTSGVKPASFDKVAIPEVKEI 262 (290)
T ss_dssp BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHH---HTTTCCCGGGGGCCCHHHHHH
T ss_pred cCCcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHH---HHcCCCCCCCCccCCHHHHHH
Confidence 3568999999999987 46999999999999999999999998643211111111 111111112233456679999
Q ss_pred HHHhcccCCCCCCCHHHHHHH
Q 010932 294 ASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 294 i~~cl~~dp~~Rps~~~ll~~ 314 (497)
|.+||+.||++|||+.++++|
T Consensus 263 i~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 263 IEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHccCChhHCcCHHHHhcC
Confidence 999999999999999999985
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-56 Score=425.75 Aligned_cols=244 Identities=20% Similarity=0.230 Sum_probs=202.1
Q ss_pred CcccccccCCCCCCcEEEEEEEc----CCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK----NNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
++|.+++.||+|+||+||+|+.. +++.||||+++.... .....+.+|+++|++++|||||++++++.+.+..||
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 45789999999999999999863 378999999975422 123468899999999999999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC--
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD-- 213 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 213 (497)
|||||+||+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp EECCCTTCEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred EEEcCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 9999999999999976 568999999999999999999999999 99999999999999999999999999985432
Q ss_pred --CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHH
Q 010932 214 --GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291 (497)
Q Consensus 214 --~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (497)
..+.+||+.|||||++.+..++.++|||||||+||||+||+.||.......+... +... ...+|...++++.
T Consensus 181 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~----i~~~--~~~~p~~~s~~~~ 254 (304)
T 3ubd_A 181 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM----ILKA--KLGMPQFLSPEAQ 254 (304)
T ss_dssp CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHC--CCCCCTTSCHHHH
T ss_pred ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHH----HHcC--CCCCCCcCCHHHH
Confidence 2457899999999999999999999999999999999999999976543332221 1111 1234566788899
Q ss_pred HHHHHhcccCCCCCCC-----HHHHHHH
Q 010932 292 ELASKCLQYEAKDRPD-----VKFLLSA 314 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps-----~~~ll~~ 314 (497)
+||.+||+.||++||| ++++++|
T Consensus 255 ~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 255 SLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp HHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred HHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 9999999999999998 4677764
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-55 Score=429.84 Aligned_cols=258 Identities=19% Similarity=0.256 Sum_probs=214.6
Q ss_pred hcCCCcccccccCCCCCCcEEEEEEEcC------CcEEEEEEccCCCCCC-hhHHHHHHHHhccCCC-Ccceeeeeeeee
Q 010932 58 TNGFSSELIVSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRH-KRLVNLIGCCAE 129 (497)
Q Consensus 58 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h-~niv~~~~~~~~ 129 (497)
.-..+++.+.+.||+|+||+||+|.+.. ++.||||+++...... .+.|.+|+.+|.+++| ||||+++|+|..
T Consensus 60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~ 139 (353)
T 4ase_A 60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 139 (353)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe
Confidence 3445677888999999999999999643 3689999997654322 4579999999999965 899999999976
Q ss_pred C-CceEEEEEcCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEe
Q 010932 130 G-DERLLVAQYMPNDTLSKHLFHWD--------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194 (497)
Q Consensus 130 ~-~~~~lv~e~~~~~~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill 194 (497)
. +..+||||||++|+|.++|+... ...+++..+..++.||+.||.|||+++ ||||||||+|||+
T Consensus 140 ~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~-iiHRDLK~~NILl 218 (353)
T 4ase_A 140 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILL 218 (353)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEE
T ss_pred cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC-eecCccCccceee
Confidence 4 56899999999999999996531 345899999999999999999999999 9999999999999
Q ss_pred CCCCCeeEcccCCccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhc
Q 010932 195 DEDGDPRLSSFGLMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRG 267 (497)
Q Consensus 195 ~~~~~~kl~Dfgla~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~ 267 (497)
++++++||+|||+|+..... ....||+.|||||++.+..++.++|||||||+||||+| |+.||+......
T Consensus 219 ~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~--- 295 (353)
T 4ase_A 219 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--- 295 (353)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH---
T ss_pred CCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH---
Confidence 99999999999999865433 23467899999999999999999999999999999998 888886542111
Q ss_pred cccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 268 KNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
.+...+....+...|..+++++.+|+.+||+.||++|||+.+|+++|+.+.+
T Consensus 296 -~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 296 -EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp -HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 1112222333445667788899999999999999999999999999988764
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-54 Score=415.12 Aligned_cols=253 Identities=18% Similarity=0.237 Sum_probs=196.2
Q ss_pred ccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCC----ceEEEEEc
Q 010932 64 ELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD----ERLLVAQY 139 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~ 139 (497)
+.+.++||+|+||+||+|++ +|+.||||+++.... ....+..|+..+.+++|||||+++|++.+++ ..+|||||
T Consensus 5 i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey 82 (303)
T 3hmm_A 5 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred EEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence 34557799999999999998 589999999965321 1122345666778899999999999998754 57999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC--------CCcccccCCCcceEeCCCCCeeEcccCCcccc
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQ--------NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS 211 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~--------~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 211 (497)
|++|+|.++|+. ..+++..+..++.|++.||.|||++ + ||||||||+||||+.++++||+|||+++..
T Consensus 83 ~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 83 HEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp CTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-EeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 999999999964 5699999999999999999999986 6 999999999999999999999999999854
Q ss_pred CCC--------CccccCCCCCCccccccC------CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhc----------
Q 010932 212 RDG--------KSYSTNLAYTPPEFLRTG------RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRG---------- 267 (497)
Q Consensus 212 ~~~--------~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~---------- 267 (497)
... ....||+.|||||++.+. .++.++|||||||+||||+||+.|+..........
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 332 234789999999999754 47889999999999999999986553211000000
Q ss_pred ccc-ccccccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhccc
Q 010932 268 KNL-LLLMDSSLEGQYA-----NEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQT 322 (497)
Q Consensus 268 ~~~-~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~ 322 (497)
..+ ..+.....++.+| ..++..+.+|+.+||+.||++|||+.+|++.|+.+.++.
T Consensus 239 ~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 000 1112222333333 245678999999999999999999999999999987653
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-53 Score=408.90 Aligned_cols=241 Identities=17% Similarity=0.212 Sum_probs=189.2
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCC---------
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD--------- 131 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--------- 131 (497)
+|.+++.||+|+||+||+|+++ +|+.||||+++..... ..+.+.+|+++|++++|||||++++++.+.+
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence 4678889999999999999986 5999999999754322 2467999999999999999999999987654
Q ss_pred ---ceEEEEEcCCCCChhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCC
Q 010932 132 ---ERLLVAQYMPNDTLSKHLFHWDK-QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGL 207 (497)
Q Consensus 132 ---~~~lv~e~~~~~~L~~~l~~~~~-~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 207 (497)
..|||||||+||+|.+++..... ...++..++.|+.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~-IiHRDlKp~NILl~~~~~vKl~DFGl 164 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGL 164 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc-CccccCcHHHeEECCCCcEEEccCcc
Confidence 36899999999999999975322 24567778999999999999999999 99999999999999999999999999
Q ss_pred ccccCCC----------------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc
Q 010932 208 MKNSRDG----------------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL 271 (497)
Q Consensus 208 a~~~~~~----------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~ 271 (497)
|+..... .+.+||+.|||||++.+..|+.++|||||||++|||++ ||........ .+.
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~---~~~ 238 (299)
T 4g31_A 165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVR---TLT 238 (299)
T ss_dssp C--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH---HHH
T ss_pred ceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHH---HHH
Confidence 9864332 23469999999999999999999999999999999996 5543321110 011
Q ss_pred cccccccCCCCC---HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 272 LLMDSSLEGQYA---NEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 272 ~~~~~~~~~~~~---~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+. ...+| ...++.+.+||.+||+.||++|||+.+++++
T Consensus 239 ~~~----~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 239 DVR----NLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHH----TTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHh----cCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111 11223 2344567899999999999999999999984
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-51 Score=409.70 Aligned_cols=249 Identities=18% Similarity=0.240 Sum_probs=200.8
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeee------CCc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAE------GDE 132 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~ 132 (497)
+.|.+++.||+|+||+||+|+++ +|+.||||+++...... .+.+.+|+++|+.++|||||++++++.. .++
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 36889999999999999999986 59999999997643322 4578899999999999999999998764 357
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
.|||||||+ |+|.+++.. .+.+++..+..++.||+.||.|||++| ||||||||+|||++.+|.+||+|||+|+...
T Consensus 134 ~~ivmE~~~-g~L~~~i~~--~~~l~~~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHS--SQPLTLEHVRYFLYQLLRGLKYMHSAQ-VIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp EEEEEECCS-EEHHHHHTS--SSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EEEEEeCCC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCc-CcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 899999996 679999865 578999999999999999999999999 9999999999999999999999999998543
Q ss_pred C--------CCccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc-------cccc-
Q 010932 213 D--------GKSYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL-------LLMD- 275 (497)
Q Consensus 213 ~--------~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~-------~~~~- 275 (497)
. ..+.+||+.|||||++.+. .++.++||||+||++|||++|+.||++............ ....
T Consensus 210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~ 289 (398)
T 4b99_A 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA 289 (398)
T ss_dssp ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-
T ss_pred cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhh
Confidence 2 2356899999999998875 468999999999999999999999976532221110000 0000
Q ss_pred ----------cccC--CCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 276 ----------SSLE--GQY-----ANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 276 ----------~~~~--~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.... ... .+..++++.+||.+||+.||++|||+.++|+|
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp ----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000 000 12346789999999999999999999999986
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-50 Score=397.72 Aligned_cols=244 Identities=18% Similarity=0.234 Sum_probs=195.9
Q ss_pred cccccccCCCCCCcEEEEEEEc----CCcEEEEEEccCCCCCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK----NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 137 (497)
.|.+++.||+|+||+||+|+.+ +++.||||++.... ...++.+|+++|+.+ +|||||++++++.+.++.+|||
T Consensus 22 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm 99 (361)
T 4f9c_A 22 VFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM 99 (361)
T ss_dssp TCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred cEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence 4688899999999999999864 37899999986543 456789999999988 6999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC-CCeeEcccCCccccCCC--
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED-GDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~~~-- 214 (497)
||++||+|.+++. .+++..+..++.||+.||.|||++| |+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 100 E~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g-IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~ 173 (361)
T 4f9c_A 100 PYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG-IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173 (361)
T ss_dssp ECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred eCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC-eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence 9999999999983 5899999999999999999999999 9999999999999876 89999999999743321
Q ss_pred ------------------------------CccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhH
Q 010932 215 ------------------------------KSYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALD 263 (497)
Q Consensus 215 ------------------------------~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~ 263 (497)
.+.+||+.|||||++.+. .++.++||||+||++|||+||+.||.....+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~ 253 (361)
T 4f9c_A 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDD 253 (361)
T ss_dssp GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCH
Confidence 234699999999999875 4899999999999999999999998543211
Q ss_pred HHhcccc-------------------------------ccc------cc---c---------ccCCCCCHHHHHHHHHHH
Q 010932 264 VIRGKNL-------------------------------LLL------MD---S---------SLEGQYANEDATQLVELA 294 (497)
Q Consensus 264 ~~~~~~~-------------------------------~~~------~~---~---------~~~~~~~~~~~~~l~~li 294 (497)
...-..+ ... .+ + ..........++++.+|+
T Consensus 254 ~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl 333 (361)
T 4f9c_A 254 LTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLL 333 (361)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHH
T ss_pred HHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHH
Confidence 1000000 000 00 0 000011123467899999
Q ss_pred HHhcccCCCCCCCHHHHHHH
Q 010932 295 SKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 295 ~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+||+.||++|||++++|+|
T Consensus 334 ~~lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 334 DKLLDLNPASRITAEEALLH 353 (361)
T ss_dssp HHHTCSCTTTSCCHHHHHTS
T ss_pred HHHCcCChhHCcCHHHHhcC
Confidence 99999999999999999985
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-50 Score=416.71 Aligned_cols=248 Identities=17% Similarity=0.171 Sum_probs=205.5
Q ss_pred CCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCC---CCChhHHHH---HHHHhccCCCCcceeeeeeeeeCCce
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQS---WPDPHQFVT---EAAGLGNVRHKRLVNLIGCCAEGDER 133 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~~---e~~~l~~l~h~niv~~~~~~~~~~~~ 133 (497)
.+++.+++.||+|+||+||+|+++. |+.||||++.+.. ......+.+ ++.+++.++|||||+++++|.+.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 4678999999999999999999864 9999999996431 122333444 46777888999999999999999999
Q ss_pred EEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC
Q 010932 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD 213 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 213 (497)
|||||||+||+|.++|.. .+.+++..+..++.||+.||.|||++| ||||||||+||||+.+|.+||+|||+|+....
T Consensus 268 ylVmEy~~GGdL~~~l~~--~~~l~E~~a~~y~~qIl~aL~yLH~~g-IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp EEEECCCCSCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 999999999999999976 568999999999999999999999999 99999999999999999999999999986544
Q ss_pred C--CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHH
Q 010932 214 G--KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290 (497)
Q Consensus 214 ~--~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (497)
. .+.+||+.|||||++.. ..|+.++|||||||+||||++|+.||.......... ....+.. ....+|...++++
T Consensus 345 ~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~-i~~~i~~--~~~~~p~~~S~~a 421 (689)
T 3v5w_A 345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLT--MAVELPDSFSPEL 421 (689)
T ss_dssp CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHH-HHHHHHH--CCCCCCTTSCHHH
T ss_pred CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHhhcC--CCCCCCccCCHHH
Confidence 3 46789999999999975 579999999999999999999999986542211100 0011111 1224566678899
Q ss_pred HHHHHHhcccCCCCCCC-----HHHHHHH
Q 010932 291 VELASKCLQYEAKDRPD-----VKFLLSA 314 (497)
Q Consensus 291 ~~li~~cl~~dp~~Rps-----~~~ll~~ 314 (497)
.+||.+||+.||.+|++ +++|++|
T Consensus 422 ~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp HHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred HHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 99999999999999998 6888875
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-50 Score=418.66 Aligned_cols=249 Identities=18% Similarity=0.180 Sum_probs=211.4
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
+.|.+++.||+|+||+||+|.++ +|+.||||++........+.+.+|+.+|+.++|||||++++++.+....+||||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 45788899999999999999986 49999999997655445678999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC--CCeeEcccCCccccCCCC---
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED--GDPRLSSFGLMKNSRDGK--- 215 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~--~~~kl~Dfgla~~~~~~~--- 215 (497)
+||+|.++|.. ..+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++......
T Consensus 237 ~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~ 314 (573)
T 3uto_A 237 SGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314 (573)
T ss_dssp CCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEE
T ss_pred CCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhccccCCCCCCEEEeeccceeEccCCCcee
Confidence 99999999864 2467999999999999999999999999 9999999999999854 899999999999765543
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
..+||+.|||||++.+..|+.++|||||||+||||++|+.||.+............ .+...........++++.+||.
T Consensus 315 ~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~s~~~~dli~ 392 (573)
T 3uto_A 315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKS--CDWNMDDSAFSGISEDGKDFIR 392 (573)
T ss_dssp EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHT--TCCCCCSGGGTTSCHHHHHHHH
T ss_pred eeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHh--CCCCCCcccccCCCHHHHHHHH
Confidence 46799999999999999999999999999999999999999876543332211110 1111112222346778999999
Q ss_pred HhcccCCCCCCCHHHHHHH
Q 010932 296 KCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~ 314 (497)
+||+.||.+|||+.++|+|
T Consensus 393 ~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 393 KLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp TTSCSSGGGSCCHHHHHHS
T ss_pred HHccCChhHCcCHHHHhcC
Confidence 9999999999999999986
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-47 Score=372.77 Aligned_cols=269 Identities=29% Similarity=0.462 Sum_probs=224.8
Q ss_pred cCHHHHHHHhcCCCcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeee
Q 010932 49 FVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA 128 (497)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 128 (497)
+.+.++...+++| .+.+.||+|+||+||+|.+++|+.||||++........+.+.+|+.+++.++||||+++++++.
T Consensus 29 ~~~~~~~~~~~~y---~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 105 (321)
T 2qkw_B 29 VPLVDLEEATNNF---DHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105 (321)
T ss_dssp -CCSCCCCCCCCC---SCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECC
T ss_pred ecHHHHHHHHhcc---CccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc
Confidence 3344444455555 5666779999999999998889999999998766555678999999999999999999999999
Q ss_pred eCCceEEEEEcCCCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccC
Q 010932 129 EGDERLLVAQYMPNDTLSKHLFHWD--KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFG 206 (497)
Q Consensus 129 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg 206 (497)
..+..++||||+++++|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||
T Consensus 106 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 106 ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA-IIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp CTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCSTTEEECTTCCEEECCCT
T ss_pred CCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC-eecCCCCHHHEEECCCCCEEEeecc
Confidence 9999999999999999999996533 235999999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhh-----------HHHhccc
Q 010932 207 LMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHAL-----------DVIRGKN 269 (497)
Q Consensus 207 la~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~-----------~~~~~~~ 269 (497)
+++..... ....||+.|+|||++.+..++.++|||||||++|+|+||+.||..... .......
T Consensus 185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 264 (321)
T 2qkw_B 185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264 (321)
T ss_dssp TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTC
T ss_pred cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccccc
Confidence 99754321 234579999999999999999999999999999999999988754311 1111222
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 270 LLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
+...+++......+...+..+.+++.+||+.||++|||+.+++++|+.+.+.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp CCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 3344455555567788999999999999999999999999999999987643
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-47 Score=372.81 Aligned_cols=274 Identities=29% Similarity=0.481 Sum_probs=227.6
Q ss_pred ccccccccCHHHHHHHhcCCCcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcc
Q 010932 42 QVPAFKEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRL 120 (497)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~ni 120 (497)
.......|++.++...+++|. +.+.||+|+||+||+|.+.+|+.||||++...... ....+.+|+.+++.++||||
T Consensus 13 ~~~~~~~~~~~~~~~~~~~y~---~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i 89 (326)
T 3uim_A 13 HLGQLKRFSLRELQVASDNFS---NKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 89 (326)
T ss_dssp --CCCEECCTHHHHTTTTSSC---STTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTB
T ss_pred ccCccceecHHHHHHHhhccc---cceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCc
Confidence 344556788999888888775 55666999999999999878999999999765432 24479999999999999999
Q ss_pred eeeeeeeeeCCceEEEEEcCCCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcC---CCcccccCCCcceEeC
Q 010932 121 VNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWD--KQPLPWEMRVRVAYYIAQALDHCNSQ---NRKLYHDLNAYRVLFD 195 (497)
Q Consensus 121 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~lh~~---~~iiH~Dlkp~Nill~ 195 (497)
+++++++......++||||+++++|.+++.... ...+++..+..++.||+.||.|||++ + ++||||||+|||++
T Consensus 90 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~-ivH~Dlkp~Nil~~ 168 (326)
T 3uim_A 90 LRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK-IIHRDVKAANILLD 168 (326)
T ss_dssp CCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSC-EECCCCSGGGEEEC
T ss_pred cceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEeCCCchhhEEEC
Confidence 999999999999999999999999999997643 34599999999999999999999999 8 99999999999999
Q ss_pred CCCCeeEcccCCccccCCC-----CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhH-------
Q 010932 196 EDGDPRLSSFGLMKNSRDG-----KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALD------- 263 (497)
Q Consensus 196 ~~~~~kl~Dfgla~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~------- 263 (497)
.++.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|+|++|+.||......
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~ 248 (326)
T 3uim_A 169 EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 248 (326)
T ss_dssp TTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBH
T ss_pred CCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhH
Confidence 9999999999999865432 2345899999999999899999999999999999999999988532111
Q ss_pred ------HHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 264 ------VIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 264 ------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
...........+.......+...+..+.+++.+||+.||.+|||+.+|+++|+...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 249 LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp HHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred HHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 11122233444455556677888999999999999999999999999999998753
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-47 Score=379.96 Aligned_cols=302 Identities=20% Similarity=0.245 Sum_probs=204.0
Q ss_pred cccccccCCCCCCcEEEEEEEc----CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK----NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
.+.+.+.||+|+||.||+|.++ ++..||||+++..... ..+.|.+|+.+|++++||||+++++++......++||
T Consensus 46 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 125 (373)
T 2qol_A 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125 (373)
T ss_dssp GCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEE
Confidence 4566778899999999999975 4778999999764322 2457999999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC--
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK-- 215 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 215 (497)
||+++++|.+++.. ....+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++......
T Consensus 126 e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 203 (373)
T 2qol_A 126 EYMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA 203 (373)
T ss_dssp ECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred eCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEEcCCCCEEECcCccccccccCCcc
Confidence 99999999999965 3457999999999999999999999999 9999999999999999999999999998654321
Q ss_pred -----ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHH
Q 010932 216 -----SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQ 289 (497)
Q Consensus 216 -----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (497)
...+|+.|+|||++.+..++.++|||||||++|||++ |+.||......... ..+........+..++..
T Consensus 204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~ 278 (373)
T 2qol_A 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-----KAVDEGYRLPPPMDCPAA 278 (373)
T ss_dssp ----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHH-----HHHHTTEECCCCTTCBHH
T ss_pred ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHcCCCCCCCccccHH
Confidence 1234678999999999999999999999999999998 88887554322211 112222223344556788
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHhhhhhccccchhhhhccCC-------CCCccCCccCCcchhhhhccchhHHHHHH
Q 010932 290 LVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVASHVLMGLS-------KAPVVLPTMLSSLGKACARMDLTAVHDIL 362 (497)
Q Consensus 290 l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~~~~~~~~~~~-------~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 362 (497)
+.+|+.+||+.||++|||+.+|++.|+.+..............+ ......++.+.+...|.....+..+.+.|
T Consensus 279 l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 358 (373)
T 2qol_A 279 LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFRTTGDWLNGVWTAHCKEIF 358 (373)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCGGGGGSBCCC----CCCEEC----------------------------
T ss_pred HHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCccccccccCCCCCCcccccCCCCccccCCCCHHHHHHhccchHHHHHH
Confidence 99999999999999999999999999998765443222111111 11122333445667777777888888888
Q ss_pred HHhcccccc
Q 010932 363 LKTGYKDEE 371 (497)
Q Consensus 363 ~~~g~~~~~ 371 (497)
...|+...+
T Consensus 359 ~~~~~~~~~ 367 (373)
T 2qol_A 359 TGVEYSSCD 367 (373)
T ss_dssp ---------
T ss_pred HhcCCCcHH
Confidence 887776544
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-47 Score=368.25 Aligned_cols=255 Identities=18% Similarity=0.268 Sum_probs=212.7
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
+.+.+.+.||+|+||+||++.+. +|+.||+|++........+.+.+|+.+++.++||||+++++++.++...++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 45677888999999999999986 49999999987655445678999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-----
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK----- 215 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 215 (497)
++++|.+++... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++......
T Consensus 90 ~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 167 (310)
T 3s95_A 90 KGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG 167 (310)
T ss_dssp TTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEECTTSCEEECCCTTCEECC--------
T ss_pred CCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCcCeEEECCCCCEEEeecccceecccccccccc
Confidence 999999999753 567999999999999999999999999 9999999999999999999999999997543221
Q ss_pred -------------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCC
Q 010932 216 -------------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282 (497)
Q Consensus 216 -------------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (497)
...||+.|+|||++.+..++.++|||||||++|+|++|..|++.......... ...........
T Consensus 168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~ 244 (310)
T 3s95_A 168 LRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG---LNVRGFLDRYC 244 (310)
T ss_dssp ------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS---BCHHHHHHHTC
T ss_pred cccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh---hhhhccccccC
Confidence 34689999999999999999999999999999999999987754321111100 00111111223
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 283 ANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 283 ~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
+..+++.+.+|+.+||+.||++|||+.++++.|+.+...
T Consensus 245 ~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 245 PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 445566799999999999999999999999999998754
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-47 Score=370.43 Aligned_cols=246 Identities=18% Similarity=0.246 Sum_probs=210.1
Q ss_pred CCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
....|.+++.||+|+||+||+|.+. +|+.||||++...... ..+.+.+|+.+|+.++||||+++++++.+.+..++|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 3457788999999999999999984 6999999999754322 245788999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 214 (497)
|||+++++|.+++.. .+.+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 93 ~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 169 (328)
T 3fe3_A 93 MEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQKR-IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK 169 (328)
T ss_dssp ECCCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG
T ss_pred EECCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc
Confidence 999999999999965 467999999999999999999999999 999999999999999999999999999865433
Q ss_pred -CccccCCCCCCccccccCCCC-cccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 215 -KSYSTNLAYTPPEFLRTGRVI-PESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
....||+.|+|||++.+..++ .++|||||||++|+|++|+.||.............. . ....|...+..+.+
T Consensus 170 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~----~--~~~~p~~~s~~~~~ 243 (328)
T 3fe3_A 170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR----G--KYRIPFYMSTDCEN 243 (328)
T ss_dssp GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH----C--CCCCCTTSCHHHHH
T ss_pred cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh----C--CCCCCCCCCHHHHH
Confidence 346789999999999988775 799999999999999999999876544333221111 1 11334556778999
Q ss_pred HHHHhcccCCCCCCCHHHHHHH
Q 010932 293 LASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~ 314 (497)
|+.+||+.||.+|||+.+++++
T Consensus 244 li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 244 LLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp HHHHHCCSSTTTSCCHHHHTTC
T ss_pred HHHHHCCCChhHCcCHHHHhcC
Confidence 9999999999999999999986
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-47 Score=364.77 Aligned_cols=246 Identities=18% Similarity=0.245 Sum_probs=209.6
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
..|.+++.||+|+||+||+|.+. +|+.||||++........+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 99 (297)
T 3fxz_A 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (297)
T ss_dssp GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECC
Confidence 46788889999999999999964 59999999998766666788999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----Cc
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KS 216 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 216 (497)
++++|.+++.. ..+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++...... ..
T Consensus 100 ~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 175 (297)
T 3fxz_A 100 AGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 175 (297)
T ss_dssp TTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred CCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCC
Confidence 99999999964 46999999999999999999999999 999999999999999999999999998765432 34
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
..||+.|+|||++.+..++.++|||||||++|+|++|+.||............ ..........+...+..+.+|+.+
T Consensus 176 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~ 252 (297)
T 3fxz_A 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI---ATNGTPELQNPEKLSAIFRDFLNR 252 (297)
T ss_dssp CCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HHHCSCCCSCGGGSCHHHHHHHHH
T ss_pred ccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HhCCCCCCCCccccCHHHHHHHHH
Confidence 57899999999999999999999999999999999999988654322111100 001111122345567889999999
Q ss_pred hcccCCCCCCCHHHHHHH
Q 010932 297 CLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~ 314 (497)
||+.||++|||+.+++++
T Consensus 253 ~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 253 CLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp HSCSSTTTSCCHHHHTTC
T ss_pred HccCChhHCcCHHHHhhC
Confidence 999999999999999985
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-46 Score=366.61 Aligned_cols=245 Identities=21% Similarity=0.236 Sum_probs=209.9
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCC---CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQ---SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
.+++.+++.||+|+||+||++..+ +|+.||||+++.. .......+.+|+.+|+.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 356788899999999999999986 4999999999653 233456789999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC---
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD--- 213 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 213 (497)
|||++||+|..++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 84 ~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 84 MEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred EeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 999999999999865 467999999999999999999999999 99999999999999999999999999985322
Q ss_pred -CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 214 -GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 214 -~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.......+.... ... ...++...++.+.+
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i----~~~--~~~~p~~~s~~~~~ 234 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI----LME--EIRFPRTLSPEAKS 234 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----HHC--CCCCCTTSCHHHHH
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHH----HcC--CCCCCCCCCHHHHH
Confidence 23567899999999999999999999999999999999999998655433222111 111 12345567788999
Q ss_pred HHHHhcccCCCCCC-----CHHHHHHH
Q 010932 293 LASKCLQYEAKDRP-----DVKFLLSA 314 (497)
Q Consensus 293 li~~cl~~dp~~Rp-----s~~~ll~~ 314 (497)
||.+||+.||++|| ++.+++++
T Consensus 235 li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 235 LLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp HHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 99999999999999 89999986
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-46 Score=362.45 Aligned_cols=258 Identities=20% Similarity=0.283 Sum_probs=207.7
Q ss_pred cCCCcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 59 NGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 59 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
..+..+.+++.||+|+||+||+|.+ +|+.||||++....... .+.+.+|+.+|++++||||+++++++......++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 3456778889999999999999987 58899999997654332 35789999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCC-CcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 137 AQYMPNDTLSKHLFHWD-KQPLPWEMRVRVAYYIAQALDHCNSQN-RKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~lh~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
|||+++++|.+++.... ...+++..+..++.||+.||.|||+.+ +++||||||+|||++.++.+||+|||+++.....
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~ 192 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST 192 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence 99999999999996522 123999999999999999999999986 3999999999999999999999999999754332
Q ss_pred ----CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHH
Q 010932 215 ----KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290 (497)
Q Consensus 215 ----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (497)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||........... ..........+..+++.+
T Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l 268 (309)
T 3p86_A 193 FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAA----VGFKCKRLEIPRNLNPQV 268 (309)
T ss_dssp ---------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHH----HHHSCCCCCCCTTSCHHH
T ss_pred ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HHhcCCCCCCCccCCHHH
Confidence 345789999999999999999999999999999999999998865432222111 111112234456677889
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 291 VELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 291 ~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
.+|+.+||+.||.+|||+.++++.|+.+.+.
T Consensus 269 ~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 269 AAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999988754
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-47 Score=375.26 Aligned_cols=253 Identities=18% Similarity=0.311 Sum_probs=211.1
Q ss_pred CcccccccCCCCCCcEEEEEEEc--------CCcEEEEEEccCCCCC-ChhHHHHHHHHhccC-CCCcceeeeeeeeeCC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK--------NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGD 131 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 131 (497)
+.+.+.+.||+|+||+||+|.+. ++..||||+++..... ..+.+.+|+.+|+.+ +||||+++++++...+
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 46678888999999999999863 3567999999765321 245799999999999 8999999999999999
Q ss_pred ceEEEEEcCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC
Q 010932 132 ERLLVAQYMPNDTLSKHLFHWD--------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197 (497)
Q Consensus 132 ~~~lv~e~~~~~~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~ 197 (497)
..++||||+++|+|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.+
T Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~ 239 (370)
T 2psq_A 161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTEN 239 (370)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTT
T ss_pred CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchhhEEECCC
Confidence 9999999999999999997532 235899999999999999999999999 9999999999999999
Q ss_pred CCeeEcccCCccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhcccc
Q 010932 198 GDPRLSSFGLMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNL 270 (497)
Q Consensus 198 ~~~kl~Dfgla~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~ 270 (497)
+.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+| |+.||.......+
T Consensus 240 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~----- 314 (370)
T 2psq_A 240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL----- 314 (370)
T ss_dssp CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH-----
T ss_pred CCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH-----
Confidence 99999999999854432 22345788999999999999999999999999999999 8877765432221
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 271 LLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
...+........+..++..+.+|+.+||+.||.+|||+.++++.|+.+..
T Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 315 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp HHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11222222334556677889999999999999999999999999998864
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-46 Score=361.19 Aligned_cols=262 Identities=18% Similarity=0.208 Sum_probs=217.7
Q ss_pred cccCHHHHHHHhcCCCc-------ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCC
Q 010932 47 KEFVLADLRAATNGFSS-------ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHK 118 (497)
Q Consensus 47 ~~~~~~~~~~~~~~~~~-------~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ 118 (497)
..++.+++..++..... +.....||+|+||.||+|... +|+.||||++........+.+.+|+.+++.++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 46889999998876432 344567899999999999986 5999999999876666678899999999999999
Q ss_pred cceeeeeeeeeCCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC
Q 010932 119 RLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG 198 (497)
Q Consensus 119 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~ 198 (497)
||+++++++...+..++||||+++++|.+++. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~---~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~ 178 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQG-VIHRDIKSDSILLTLDG 178 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTC
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCC
Confidence 99999999999999999999999999999985 357999999999999999999999999 99999999999999999
Q ss_pred CeeEcccCCccccCCC----CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccccc
Q 010932 199 DPRLSSFGLMKNSRDG----KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLM 274 (497)
Q Consensus 199 ~~kl~Dfgla~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~ 274 (497)
.+||+|||++...... ....||+.|+|||++.+..++.++|||||||++|+|++|+.||........... +....
T Consensus 179 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~-~~~~~ 257 (321)
T 2c30_A 179 RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR-LRDSP 257 (321)
T ss_dssp CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-HHHSS
T ss_pred cEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HhcCC
Confidence 9999999998764432 345789999999999999999999999999999999999998865432221111 11111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010932 275 DSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 275 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l 315 (497)
.+. ...+...+..+.+|+.+||+.||++|||+.+++++-
T Consensus 258 ~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp 296 (321)
T 2c30_A 258 PPK--LKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHP 296 (321)
T ss_dssp CCC--CTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred CCC--cCccccCCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 111 112234567899999999999999999999999863
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-46 Score=365.75 Aligned_cols=255 Identities=21% Similarity=0.277 Sum_probs=211.5
Q ss_pred CcccccccCCCCCCcEEEEEEEc----CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK----NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
..+.+++.||+|+||+||+|.+. .+..||||+++..... ..+.+.+|+.+|+.++||||+++++++.+.+..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 45678889999999999999975 2456999999764322 245799999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK- 215 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 215 (497)
|||+++++|.+++... ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++......
T Consensus 129 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 206 (325)
T 3kul_A 129 TEYMENGSLDTFLRTH-DGQFTIMQLVGMLRGVGAGMRYLSDLG-YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206 (325)
T ss_dssp EECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCSSCEECC----
T ss_pred eeCCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEECCCCCEEECCCCcccccccCcc
Confidence 9999999999999652 467999999999999999999999999 9999999999999999999999999998654332
Q ss_pred ------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHH
Q 010932 216 ------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288 (497)
Q Consensus 216 ------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (497)
...+|+.|+|||++.+..++.++|||||||++|+|++ |..||.......... .+........+..++.
T Consensus 207 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 281 (325)
T 3kul_A 207 AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVIS-----SVEEGYRLPAPMGCPH 281 (325)
T ss_dssp CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHH-----HHHTTCCCCCCTTCCH
T ss_pred ceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHH-----HHHcCCCCCCCCCcCH
Confidence 2234678999999999999999999999999999999 888875543322211 1112223344556778
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcccc
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~ 323 (497)
.+.+|+.+||+.||++|||+.+|++.|+.+.....
T Consensus 282 ~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 282 ALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 89999999999999999999999999999876544
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-46 Score=353.58 Aligned_cols=251 Identities=22% Similarity=0.311 Sum_probs=213.4
Q ss_pred CcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
+.+.+++.||+|+||+||++.+.+++.||||++.... ...+.+.+|+.++++++||||+++++++.+....++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 5678889999999999999999888999999997543 345789999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-----Cc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-----KS 216 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 216 (497)
+++|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++..... ..
T Consensus 89 ~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 166 (269)
T 4hcu_A 89 HGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 166 (269)
T ss_dssp TCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred CCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhCC-eecCCcchheEEEcCCCCEEeccccccccccccccccccC
Confidence 9999999965 3457999999999999999999999999 999999999999999999999999999865432 23
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
..+|+.|+|||++.+..++.++|||||||++|+|++ |+.||........... +........+...+..+.+|+.
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~li~ 241 (269)
T 4hcu_A 167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED-----ISTGFRLYKPRLASTHVYQIMN 241 (269)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH-----HHTTCCCCCCTTSCHHHHHHHH
T ss_pred cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHH-----HhcCccCCCCCcCCHHHHHHHH
Confidence 455778999999999999999999999999999999 8877755433222111 1111222334456778999999
Q ss_pred HhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 296 KCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
+||+.||++|||+.+++++|+.+..
T Consensus 242 ~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 242 HCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHccCCcccCcCHHHHHHHHHHHHH
Confidence 9999999999999999999998864
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-46 Score=367.68 Aligned_cols=247 Identities=17% Similarity=0.185 Sum_probs=206.5
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC------ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP------DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
.|.+++.||+|+||+||++..+ +|+.||||++...... ..+.+.+|+.+|+.++||||+++++++.+....++
T Consensus 13 ~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 92 (361)
T 2yab_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVL 92 (361)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEE
Confidence 4678888999999999999986 4999999999765332 24679999999999999999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC----CeeEcccCCcccc
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG----DPRLSSFGLMKNS 211 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfgla~~~ 211 (497)
||||++||+|.+++.. .+.+++..+..++.||+.||.|||++| ++||||||+|||++.++ .+||+|||+++..
T Consensus 93 v~e~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~ 169 (361)
T 2yab_A 93 ILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (361)
T ss_dssp EEECCCSCBHHHHHTT--CSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCSSCEEC
T ss_pred EEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEeCCCCCccCEEEEecCCceEc
Confidence 9999999999999965 567999999999999999999999999 99999999999998777 7999999999865
Q ss_pred CCC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHH
Q 010932 212 RDG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288 (497)
Q Consensus 212 ~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (497)
... ....||+.|+|||++.+..++.++|||||||++|+|++|..||............... ............+.
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~ 247 (361)
T 2yab_A 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV--SYDFDEEFFSQTSE 247 (361)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTT--CCCCCHHHHTTSCH
T ss_pred CCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc--CCCCCchhccCCCH
Confidence 443 3567899999999999889999999999999999999999998765333221111000 00000011123467
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+.+||.+||..||.+|||+.+++++
T Consensus 248 ~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 248 LAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 89999999999999999999999985
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-45 Score=354.24 Aligned_cols=271 Identities=30% Similarity=0.506 Sum_probs=223.5
Q ss_pred cccccCHHHHHHHhcCCCccccc---ccCCCCCCcEEEEEEEcCCcEEEEEEccCCCC----CChhHHHHHHHHhccCCC
Q 010932 45 AFKEFVLADLRAATNGFSSELIV---SESGDKAPNVVYRGRLKNNRLVAIKRFSRQSW----PDPHQFVTEAAGLGNVRH 117 (497)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~---~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h 117 (497)
....|++.++..++++|+...+. +.||+|+||+||+|.. +++.||||++..... ...+.+.+|+.+++.++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 45678999999999999866332 5679999999999997 588999999875321 224679999999999999
Q ss_pred CcceeeeeeeeeCCceEEEEEcCCCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC
Q 010932 118 KRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWD-KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE 196 (497)
Q Consensus 118 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~ 196 (497)
|||+++++++.+.+..++||||+++++|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH-HIHRDIKSANILLDE 168 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECT
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEcC
Confidence 999999999999999999999999999999986432 457999999999999999999999999 999999999999999
Q ss_pred CCCeeEcccCCccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHH------
Q 010932 197 DGDPRLSSFGLMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDV------ 264 (497)
Q Consensus 197 ~~~~kl~Dfgla~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~------ 264 (497)
++.+||+|||+++..... ....||+.|+|||.+. +.++.++|||||||++|+|++|..||.......
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHT-TEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhc-CCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 999999999998765432 2346899999999886 468999999999999999999998875432110
Q ss_pred --Hh--ccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 265 --IR--GKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 265 --~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
.. ...+...++.. ....+...+..+.+++.+||+.||.+|||+.+++++|+.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHTTSCCHHHHSCSS-CSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHhhhhhhhhhhhcccc-ccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 00 00111122222 23456778889999999999999999999999999999875
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=355.91 Aligned_cols=256 Identities=19% Similarity=0.246 Sum_probs=209.5
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC---hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
..|.+++.||+|+||.||++.+. +++.||||++....... .+.+.+|+.++++++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 35788899999999999999975 48999999986544333 357899999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 214 (497)
||++|++|.+++.. .+.+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 91 e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 167 (294)
T 4eqm_A 91 EYIEGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAHDMR-IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT 167 (294)
T ss_dssp ECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred eCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEEeCCCcccccccccc
Confidence 99999999999975 457999999999999999999999999 999999999999999999999999999865432
Q ss_pred --CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 215 --KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 215 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
....||+.|+|||++.+..++.++|||||||++|+|+||+.||.................. ......+...+..+.+
T Consensus 168 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ 246 (294)
T 4eqm_A 168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVP-NVTTDVRKDIPQSLSN 246 (294)
T ss_dssp -------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCC-CHHHHSCTTSCHHHHH
T ss_pred ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCC-CcchhcccCCCHHHHH
Confidence 2356899999999999999999999999999999999999998765433221111111111 1111223445678999
Q ss_pred HHHHhcccCCCCCC-CHHHHHHHhhhhhcc
Q 010932 293 LASKCLQYEAKDRP-DVKFLLSAVAPLQKQ 321 (497)
Q Consensus 293 li~~cl~~dp~~Rp-s~~~ll~~l~~~~~~ 321 (497)
++.+||+.||.+|| ++.++.+.|+.+...
T Consensus 247 li~~~l~~dp~~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 247 VILRATEKDKANRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp HHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred HHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence 99999999999998 999999999887643
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=359.62 Aligned_cols=245 Identities=18% Similarity=0.245 Sum_probs=210.2
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCC---CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQ---SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
.+++.+++.||+|+||+||++..+ +|+.||||+++.. .....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 356788899999999999999986 5999999999653 223456788999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-C
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-K 215 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~ 215 (497)
|||++||+|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.+|.+||+|||+++..... .
T Consensus 85 ~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~ 161 (318)
T 1fot_A 85 MDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 161 (318)
T ss_dssp ECCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred EeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChheEEEcCCCCEEEeecCcceecCCccc
Confidence 999999999999976 567999999999999999999999999 999999999999999999999999999865443 4
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
...||+.|+|||++.+..++.++|||||||++|||++|+.||........... +... ...++...+..+.+|+.
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~----i~~~--~~~~p~~~~~~~~~li~ 235 (318)
T 1fot_A 162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEK----ILNA--ELRFPPFFNEDVKDLLS 235 (318)
T ss_dssp CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HHHC--CCCCCTTSCHHHHHHHH
T ss_pred cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHH----HHhC--CCCCCCCCCHHHHHHHH
Confidence 56799999999999999999999999999999999999998865433222111 1111 12345556788999999
Q ss_pred HhcccCCCCCC-----CHHHHHHH
Q 010932 296 KCLQYEAKDRP-----DVKFLLSA 314 (497)
Q Consensus 296 ~cl~~dp~~Rp-----s~~~ll~~ 314 (497)
+||+.||++|| ++++++++
T Consensus 236 ~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 236 RLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp HHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHhccCHHHcCCCcCCCHHHHhcC
Confidence 99999999999 88999876
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=377.05 Aligned_cols=253 Identities=21% Similarity=0.349 Sum_probs=213.4
Q ss_pred CCCcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCC-ceEEEEE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD-ERLLVAQ 138 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e 138 (497)
+.+.+.+++.||+|+||.||+|.+. |+.||||+++... ..+.|.+|+.+|++++||||+++++++.... ..++|||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 3456778899999999999999985 7899999998654 4678999999999999999999999987765 7899999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-Ccc
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-KSY 217 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~ 217 (497)
|+++|+|.+++.......+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ...
T Consensus 268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 346 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 346 (450)
T ss_dssp CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCC
Confidence 999999999998754556899999999999999999999999 999999999999999999999999999854433 234
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
.+|+.|+|||++.+..++.++|||||||++|||+| |+.||+...... ....+........+..+++.+.+||.+
T Consensus 347 ~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~-----~~~~i~~~~~~~~p~~~~~~l~~li~~ 421 (450)
T 1k9a_A 347 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----VVPRVEKGYKMDAPDGCPPAVYDVMKN 421 (450)
T ss_dssp CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT-----HHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred CCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHcCCCCCCCCcCCHHHHHHHHH
Confidence 56789999999999999999999999999999998 888876532221 111222223344566778899999999
Q ss_pred hcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 297 CLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
||+.||++|||+.++++.|+.+...
T Consensus 422 cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 422 CWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HcCCChhHCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999988654
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-46 Score=363.79 Aligned_cols=254 Identities=19% Similarity=0.270 Sum_probs=207.1
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcE----EEEEEccCCC-CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRL----VAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
+.+.+++.||+|+||+||+|.+.. |+. ||+|++.... ....+.+.+|+.+++.++||||+++++++. +...++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 467888999999999999999753 554 8888875443 233467889999999999999999999986 466899
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG- 214 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 214 (497)
||||+++|+|.+++... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 92 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 169 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHG-MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169 (325)
T ss_dssp EEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTT-CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred EEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCC-CCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence 99999999999999653 457999999999999999999999999 999999999999999999999999999865432
Q ss_pred -----CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHH
Q 010932 215 -----KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288 (497)
Q Consensus 215 -----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (497)
....+|+.|+|||++.+..++.++|||||||++|+|+| |+.||........ ...+........+..++.
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 244 (325)
T 3kex_A 170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV-----PDLLEKGERLAQPQICTI 244 (325)
T ss_dssp TCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH-----HHHHHTTCBCCCCTTBCT
T ss_pred ccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH-----HHHHHcCCCCCCCCcCcH
Confidence 23456789999999999999999999999999999999 9988765322221 111122222233444666
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcccc
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~ 323 (497)
.+.+|+.+||+.||.+|||+.+++++|+.+...+.
T Consensus 245 ~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~~ 279 (325)
T 3kex_A 245 DVYMVMVKCWMIDENIRPTFKELANEFTRMARDPP 279 (325)
T ss_dssp TTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 78999999999999999999999999999876543
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=374.74 Aligned_cols=253 Identities=23% Similarity=0.331 Sum_probs=212.0
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
+.+.+.+.||+|+||.||+|.++ +++.||||+++..... ..+.|.+|+.+|++++||||+++++++...+..++||||
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 193 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL 193 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEc
Confidence 45677788999999999999986 5899999999754321 134688999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC----
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK---- 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 215 (497)
+++|+|.+++... +..+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++......
T Consensus 194 ~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~ 271 (377)
T 3cbl_A 194 VQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS 271 (377)
T ss_dssp CTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECC
T ss_pred CCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeec
Confidence 9999999999652 456999999999999999999999999 9999999999999999999999999998644321
Q ss_pred --ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 216 --SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 216 --~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
...+++.|+|||++.++.++.++|||||||++|||+| |..|+........ ...+........+..++..+.+
T Consensus 272 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~ 346 (377)
T 3cbl_A 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT-----REFVEKGGRLPCPELCPDAVFR 346 (377)
T ss_dssp SSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH-----HHHHHTTCCCCCCTTCCHHHHH
T ss_pred CCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHcCCCCCCCCCCCHHHHH
Confidence 2234678999999999999999999999999999998 8877765432222 1122222233445667788999
Q ss_pred HHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 293 LASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
|+.+||+.||++|||+.++++.|+.+.+.
T Consensus 347 li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 347 LMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 99999999999999999999999988653
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=366.42 Aligned_cols=252 Identities=17% Similarity=0.132 Sum_probs=198.5
Q ss_pred CCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
..+.|.+++.||+|+||+||++... +|+.||||++..... ..+.+.+|+.+++.++||||+++++++.+....++|||
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 3457889999999999999999986 599999999976443 34678999999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCC--eeEcccCCccccCC---
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGD--PRLSSFGLMKNSRD--- 213 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~--~kl~Dfgla~~~~~--- 213 (497)
|+++++|.+++.. .+.+++..+..++.||+.||.|||++| ++||||||+|||++.++. +||+|||+++....
T Consensus 97 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~ql~~~L~~LH~~~-ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~ 173 (361)
T 3uc3_A 97 YASGGELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSMQ-ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 173 (361)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred eCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCceEEEeecCccccccccCC
Confidence 9999999999865 457999999999999999999999999 999999999999987765 99999999874322
Q ss_pred CCccccCCCCCCccccccCCCCcc-cceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 214 GKSYSTNLAYTPPEFLRTGRVIPE-SVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 214 ~~~~~gt~~y~aPE~~~~~~~~~~-~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
.....||+.|+|||++.+..++.+ +|||||||++|+|++|+.||............+..+.............+..+.+
T Consensus 174 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 253 (361)
T 3uc3_A 174 PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCH 253 (361)
T ss_dssp -------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHH
T ss_pred CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHH
Confidence 245678999999999988887665 8999999999999999998865321111111111111111111122235678999
Q ss_pred HHHHhcccCCCCCCCHHHHHHHh
Q 010932 293 LASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~l 315 (497)
||.+||+.||++|||+.+++++-
T Consensus 254 li~~~L~~dP~~Rps~~ell~hp 276 (361)
T 3uc3_A 254 LISRIFVADPATRISIPEIKTHS 276 (361)
T ss_dssp HHHHHSCSCTTTSCCHHHHHTSH
T ss_pred HHHHHccCChhHCcCHHHHHhCc
Confidence 99999999999999999999873
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-46 Score=351.67 Aligned_cols=252 Identities=21% Similarity=0.311 Sum_probs=211.9
Q ss_pred CcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
+.+.+++.||+|+||+||++.++++..||||++..... ..+.+.+|+.++.+++||||+++++++.+....++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS 86 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence 46678889999999999999998888999999976543 45779999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-----c
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK-----S 216 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 216 (497)
+++|.+++... ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++....... .
T Consensus 87 ~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 164 (268)
T 3sxs_A 87 NGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQ-FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG 164 (268)
T ss_dssp TCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred CCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence 99999999653 446999999999999999999999999 9999999999999999999999999998654432 2
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
..+|+.|+|||++.+..++.++||||||+++|+|+| |+.||........... +........+...++.+.+++.
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~ 239 (268)
T 3sxs_A 165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLK-----VSQGHRLYRPHLASDTIYQIMY 239 (268)
T ss_dssp CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH-----HHTTCCCCCCTTSCHHHHHHHH
T ss_pred CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHH-----HHcCCCCCCCCcChHHHHHHHH
Confidence 345677999999998899999999999999999999 8877754432222111 1111122233445678999999
Q ss_pred HhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 296 KCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
+||+.||.+|||+.+++++|+.+...
T Consensus 240 ~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 240 SCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp HTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred HHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 99999999999999999999998754
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=369.04 Aligned_cols=250 Identities=19% Similarity=0.270 Sum_probs=205.8
Q ss_pred CCCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCC---CChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSW---PDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 134 (497)
+..++.+++.||+|+||+||+++++. ++.||||+++.... ...+.+.+|..+|.++ +||||+++++++.+.+..+
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 44567889999999999999999864 88999999975422 2345688999999877 8999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC-
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD- 213 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~- 213 (497)
+||||++||+|..++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 130 lV~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEEcCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 99999999999999875 467999999999999999999999999 99999999999999999999999999985322
Q ss_pred ---CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccc----c-ccccccccCCCCCHH
Q 010932 214 ---GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKN----L-LLLMDSSLEGQYANE 285 (497)
Q Consensus 214 ---~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~ 285 (497)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||............ + ..+.. ....+|..
T Consensus 207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~ 284 (396)
T 4dc2_A 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRS 284 (396)
T ss_dssp TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH--CCCCCCTT
T ss_pred CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc--cccCCCCc
Confidence 24568999999999999999999999999999999999999988532111100000 0 01111 12245566
Q ss_pred HHHHHHHHHHHhcccCCCCCCCH------HHHHHH
Q 010932 286 DATQLVELASKCLQYEAKDRPDV------KFLLSA 314 (497)
Q Consensus 286 ~~~~l~~li~~cl~~dp~~Rps~------~~ll~~ 314 (497)
.+..+.+||.+||+.||.+||++ .+|+++
T Consensus 285 ~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 285 LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 78889999999999999999985 677775
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-46 Score=359.66 Aligned_cols=258 Identities=18% Similarity=0.294 Sum_probs=210.0
Q ss_pred CcccccccCCCCCCcEEEEEEE-----cCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeee--CCceE
Q 010932 62 SSELIVSESGDKAPNVVYRGRL-----KNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE--GDERL 134 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~ 134 (497)
..+.+++.||+|+||+||++.+ .+|+.||||++........+.+.+|+.+|++++||||+++++++.. ....+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 4678889999999999999984 2488999999986554445689999999999999999999999855 35689
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
+||||+++++|.+++... ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 90 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167 (295)
T ss_dssp EEEECCTTCBHHHHHHHC-GGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred EEEEeCCCCCHHHHHHhc-ccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence 999999999999999653 446999999999999999999999999 999999999999999999999999999865432
Q ss_pred C-------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhc---c--------cccccccc
Q 010932 215 K-------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRG---K--------NLLLLMDS 276 (497)
Q Consensus 215 ~-------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~---~--------~~~~~~~~ 276 (497)
. ...+|+.|+|||++.+..++.++|||||||++|+|+||..|+.......... . .....+..
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (295)
T 3ugc_A 168 KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 247 (295)
T ss_dssp --------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred cceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhc
Confidence 1 2345677999999999999999999999999999999998775443221110 0 11111222
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 277 SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 277 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
......+..++..+.+|+.+||+.||++|||+.++++.|+.+...
T Consensus 248 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 248 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 223344566788899999999999999999999999999988754
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-46 Score=368.43 Aligned_cols=245 Identities=20% Similarity=0.229 Sum_probs=205.7
Q ss_pred CCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCC---CCCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQ---SWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 135 (497)
.+.+.+++.||+|+||+||+|+++. |+.||||+++.. .....+.+.+|..+|..+ +||||+++++++.+.+..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 4677889999999999999999864 899999999753 223456788999999988 69999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC--
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD-- 213 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 213 (497)
||||++||+|..++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 102 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~ 178 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG 178 (353)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCCHHHEEECCCCCEEEccccceeecccCC
Confidence 9999999999999976 467999999999999999999999999 99999999999999999999999999985332
Q ss_pred --CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHH
Q 010932 214 --GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291 (497)
Q Consensus 214 --~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (497)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||.......+.... ... ...++...+..+.
T Consensus 179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i----~~~--~~~~p~~~~~~~~ 252 (353)
T 3txo_A 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI----LND--EVVYPTWLHEDAT 252 (353)
T ss_dssp -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----HHC--CCCCCTTSCHHHH
T ss_pred ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHH----HcC--CCCCCCCCCHHHH
Confidence 23567999999999999888999999999999999999999998765433322211 111 1234455677899
Q ss_pred HHHHHhcccCCCCCCCH------HHHHHH
Q 010932 292 ELASKCLQYEAKDRPDV------KFLLSA 314 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps~------~~ll~~ 314 (497)
+|+.+||+.||.+||++ .++++|
T Consensus 253 ~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 253 GILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp HHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred HHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 99999999999999998 788875
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-46 Score=370.22 Aligned_cols=257 Identities=20% Similarity=0.311 Sum_probs=211.4
Q ss_pred CcccccccCCCCCCcEEEEEEEc------CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK------NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 134 (497)
..+.+++.||+|+||+||+|.+. +++.||||+++..... ....+.+|+.++++++||||+++++++......+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 45678889999999999999953 3678999999754322 2457899999999999999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC---CeeEcccC
Q 010932 135 LVAQYMPNDTLSKHLFHWD-----KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG---DPRLSSFG 206 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~-----~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~---~~kl~Dfg 206 (497)
+||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kL~DFG 229 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFG 229 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEEecCCCCceEEECCCc
Confidence 9999999999999997532 246999999999999999999999999 99999999999999555 59999999
Q ss_pred Ccccc------CCCCccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccC
Q 010932 207 LMKNS------RDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLE 279 (497)
Q Consensus 207 la~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (497)
+++.. .......+|+.|+|||++.+..++.++|||||||++|||+| |..||......... ..+.....
T Consensus 230 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~-----~~i~~~~~ 304 (367)
T 3l9p_A 230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL-----EFVTSGGR 304 (367)
T ss_dssp HHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH-----HHHHTTCC
T ss_pred cccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHcCCC
Confidence 98742 22234567889999999999999999999999999999998 88777654332221 11111222
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhccccc
Q 010932 280 GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEV 324 (497)
Q Consensus 280 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~~ 324 (497)
...+..++..+.+|+.+||+.||++|||+.+|+++|+.+......
T Consensus 305 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~~ 349 (367)
T 3l9p_A 305 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 349 (367)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHH
T ss_pred CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChhh
Confidence 334555677899999999999999999999999999998766544
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-46 Score=378.20 Aligned_cols=252 Identities=17% Similarity=0.304 Sum_probs=213.3
Q ss_pred CcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
+.+.+.+.||+|+||+||+|.++++..||||+++... ...+.|.+|+.+|+.++||||+++++++. ....++||||++
T Consensus 188 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~ 265 (454)
T 1qcf_A 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMA 265 (454)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCT
T ss_pred HHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecC
Confidence 3456778899999999999999888999999998644 35688999999999999999999999986 567899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-----Cc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-----KS 216 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 216 (497)
+|+|.+++.......+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ..
T Consensus 266 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 344 (454)
T 1qcf_A 266 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 344 (454)
T ss_dssp TCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCS
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCC
Confidence 999999997543457899999999999999999999999 999999999999999999999999999865432 22
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
..+|+.|+|||++....++.++|||||||+||||+| |+.||.......+.. .+........+..+++.+.+|+.
T Consensus 345 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~-----~i~~~~~~~~~~~~~~~l~~li~ 419 (454)
T 1qcf_A 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIR-----ALERGYRMPRPENCPEELYNIMM 419 (454)
T ss_dssp SSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH-----HHHHTCCCCCCTTSCHHHHHHHH
T ss_pred CcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHHcCCCCCCCCCCCHHHHHHHH
Confidence 345678999999999999999999999999999999 888876543322211 11122233445667788999999
Q ss_pred HhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 296 KCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
+||+.||++|||+.+|++.|+.+...
T Consensus 420 ~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 420 RCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred HHccCChhHCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999988654
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-45 Score=359.23 Aligned_cols=247 Identities=17% Similarity=0.164 Sum_probs=205.6
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC------ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP------DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
.|.+.+.||+|+||+||++..+ +|+.||||++...... ..+.+.+|+.+|+.++||||+++++++.+....++
T Consensus 12 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 91 (326)
T 2y0a_A 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL 91 (326)
T ss_dssp HEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4677888999999999999986 4999999999754322 35679999999999999999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC----CeeEcccCCcccc
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG----DPRLSSFGLMKNS 211 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfgla~~~ 211 (497)
||||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++ .+||+|||+++..
T Consensus 92 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~ 168 (326)
T 2y0a_A 92 ILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168 (326)
T ss_dssp EEECCCSCBHHHHHTT--SSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHHCC-eEcCCCCHHHEEEecCCCCCCCEEEEECCCCeEC
Confidence 9999999999999965 567999999999999999999999999 99999999999999887 8999999999865
Q ss_pred CCC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHH
Q 010932 212 RDG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288 (497)
Q Consensus 212 ~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (497)
... ....||+.|+|||++.+..++.++|||||||++|+|++|..||.............. .............+.
T Consensus 169 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 246 (326)
T 2y0a_A 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSA--VNYEFEDEYFSNTSA 246 (326)
T ss_dssp CTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHH--TCCCCCHHHHTTSCH
T ss_pred CCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHh--cCCCcCccccccCCH
Confidence 432 345789999999999988999999999999999999999998865432222111000 000011111123467
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+.+|+.+||+.||++|||+.+++++
T Consensus 247 ~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 247 LAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHHccCChhhCCCHHHHhcC
Confidence 79999999999999999999999986
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-46 Score=361.72 Aligned_cols=254 Identities=18% Similarity=0.273 Sum_probs=203.1
Q ss_pred CcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCC----ceEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD----ERLLVA 137 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~lv~ 137 (497)
..+.+++.||+|+||+||+|.+. ++.||||++.... .....+.+|+.+|++++||||+++++++.... ..++||
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 46788889999999999999985 7999999996542 12345677999999999999999999998754 369999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC----------CCcccccCCCcceEeCCCCCeeEcccCC
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQ----------NRKLYHDLNAYRVLFDEDGDPRLSSFGL 207 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~----------~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 207 (497)
||+++|+|.+++.. ..+++..+..++.||+.||.|||+. + ++||||||+|||++.++.+||+|||+
T Consensus 102 e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~-ivH~Dlkp~Nill~~~~~~kL~DFg~ 177 (322)
T 3soc_A 102 AFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA-ISHRDIKSKNVLLKNNLTACIADFGL 177 (322)
T ss_dssp ECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE-EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred ecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC-EEeCCCChHhEEECCCCeEEEccCCc
Confidence 99999999999964 4699999999999999999999998 8 99999999999999999999999999
Q ss_pred ccccCCC------CccccCCCCCCcccccc-----CCCCcccceeehhhhHHHHhhCCCCCCchhhHHH-------hc--
Q 010932 208 MKNSRDG------KSYSTNLAYTPPEFLRT-----GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVI-------RG-- 267 (497)
Q Consensus 208 a~~~~~~------~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~-------~~-- 267 (497)
++..... ....||+.|+|||++.+ ..++.++|||||||++|||+||+.||........ ..
T Consensus 178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 257 (322)
T 3soc_A 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP 257 (322)
T ss_dssp CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC
T ss_pred ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCC
Confidence 9754332 23568999999999986 3567789999999999999999988754211000 00
Q ss_pred --cccc-cccccccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 268 --KNLL-LLMDSSLEGQY-----ANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 268 --~~~~-~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
.... ........... ....+..+.+|+.+||+.||++|||+.+|++.|+.+.+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 258 SLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred chhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0000 00111111111 124567799999999999999999999999999998754
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=380.11 Aligned_cols=254 Identities=20% Similarity=0.342 Sum_probs=217.1
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
..+.+.+.||+|+||.||+|.++. +..||||+++... ...+.|.+|+.+|++++||||+++++++......++||||+
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~ 298 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence 456777889999999999999875 8899999997643 34678999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-----
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK----- 215 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 215 (497)
++|+|.+++.......+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++......
T Consensus 299 ~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 377 (495)
T 1opk_A 299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 377 (495)
T ss_dssp TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCT
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhEEECCCCcEEEeecccceeccCCceeecC
Confidence 9999999998765677999999999999999999999999 9999999999999999999999999998654322
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 294 (497)
...+|+.|+|||++.+..++.++|||||||+||||+| |..|+....... +...+........+..++..+.+||
T Consensus 378 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li 452 (495)
T 1opk_A 378 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-----VYELLEKDYRMERPEGCPEKVYELM 452 (495)
T ss_dssp TCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-----HHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred CCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHcCCCCCCCCCCCHHHHHHH
Confidence 2345678999999999999999999999999999999 887776543221 1222233334445666788899999
Q ss_pred HHhcccCCCCCCCHHHHHHHhhhhhccc
Q 010932 295 SKCLQYEAKDRPDVKFLLSAVAPLQKQT 322 (497)
Q Consensus 295 ~~cl~~dp~~Rps~~~ll~~l~~~~~~~ 322 (497)
.+||+.||++|||+.+|++.|+.+....
T Consensus 453 ~~cl~~dP~~RPs~~el~~~L~~~~~~~ 480 (495)
T 1opk_A 453 RACWQWNPSDRPSFAEIHQAFETMFQES 480 (495)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTSCSSS
T ss_pred HHHcCcChhHCcCHHHHHHHHHHHHhcc
Confidence 9999999999999999999999886443
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-45 Score=351.29 Aligned_cols=251 Identities=23% Similarity=0.352 Sum_probs=209.8
Q ss_pred CcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
+.+.+++.||+|+||+||++.++++..||||++..... ..+.+.+|++++..++||||+++++++.+....++||||++
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 102 (283)
T 3gen_A 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 102 (283)
T ss_dssp GGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCT
T ss_pred HHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccC
Confidence 46788899999999999999998888999999986532 45789999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-----Cc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-----KS 216 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 216 (497)
+++|.+++... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ..
T Consensus 103 ~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 180 (283)
T 3gen_A 103 NGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180 (283)
T ss_dssp TCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTS
T ss_pred CCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCccceEEEcCCCCEEEccccccccccccccccccC
Confidence 99999999652 457999999999999999999999999 999999999999999999999999999865432 23
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
..+|+.|+|||++.+..++.++||||||+++|+|+| |+.||.......... .+........+...++.+.+|+.
T Consensus 181 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~ 255 (283)
T 3gen_A 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE-----HIAQGLRLYRPHLASEKVYTIMY 255 (283)
T ss_dssp TTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH-----HHHTTCCCCCCTTCCHHHHHHHH
T ss_pred CccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHH-----HHhcccCCCCCCcCCHHHHHHHH
Confidence 445778999999998999999999999999999998 888775543222211 11111222334445678999999
Q ss_pred HhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 296 KCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
+||+.||.+|||+.+++++|+.+..
T Consensus 256 ~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 256 SCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp HTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHccCChhHCcCHHHHHHHHHHHhh
Confidence 9999999999999999999998764
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-46 Score=359.39 Aligned_cols=255 Identities=20% Similarity=0.317 Sum_probs=209.2
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-C-------cEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCce
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-N-------RLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 133 (497)
+.+.+++.||+|+||+||+|.+.. + ..||+|++........+.+.+|+.+++.++||||+++++++...+..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 456788889999999999999753 4 47999999766555567899999999999999999999999999999
Q ss_pred EEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCC--------eeEccc
Q 010932 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGD--------PRLSSF 205 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~--------~kl~Df 205 (497)
++||||+++++|.+++... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++. +||+||
T Consensus 88 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Df 165 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAAAMHFLEENT-LIHGNVCAKNILLIREEDRKTGNPPFIKLSDP 165 (289)
T ss_dssp EEEEECCTTCBHHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEEECCBGGGTBCCEEEECCC
T ss_pred EEEEECCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHhhCC-eECCCcCcceEEEecCCcccccccceeeeccC
Confidence 9999999999999999752 345999999999999999999999999 999999999999998887 999999
Q ss_pred CCccccCCCCccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCH
Q 010932 206 GLMKNSRDGKSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYAN 284 (497)
Q Consensus 206 gla~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (497)
|++..........+|+.|+|||++.+ ..++.++|||||||++|+|++|..||........... ... .....+.
T Consensus 166 g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~----~~~--~~~~~~~ 239 (289)
T 4fvq_A 166 GISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQ----FYE--DRHQLPA 239 (289)
T ss_dssp CSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH----HHH--TTCCCCC
T ss_pred cccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHH----Hhh--ccCCCCC
Confidence 99987666666678999999999987 6789999999999999999997766543321111110 000 0112233
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhccccc
Q 010932 285 EDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEV 324 (497)
Q Consensus 285 ~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~~ 324 (497)
..+..+.+|+.+||+.||++|||+.+++++|+.+......
T Consensus 240 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~ 279 (289)
T 4fvq_A 240 PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV 279 (289)
T ss_dssp CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-----
T ss_pred CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCC
Confidence 3456689999999999999999999999999999765443
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-45 Score=352.19 Aligned_cols=250 Identities=19% Similarity=0.238 Sum_probs=200.4
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
+.|.+++.||+|+||+||+|.++ +|+.||||++....... .+.+.+|+.++++++||||+++++++.++...++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46788999999999999999986 48999999997554332 4678999999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---- 214 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 214 (497)
|+++ +|.+.+.. ..+.+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~~-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~-ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (292)
T 3o0g_A 82 FCDQ-DLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158 (292)
T ss_dssp CCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCC
T ss_pred cCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceecCCccccc
Confidence 9976 55555543 2567999999999999999999999999 999999999999999999999999999865422
Q ss_pred CccccCCCCCCccccccCC-CCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccccc---------------c---
Q 010932 215 KSYSTNLAYTPPEFLRTGR-VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLM---------------D--- 275 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~---------------~--- 275 (497)
....+|+.|+|||++.+.. ++.++|||||||++|+|++|..|+............+.... +
T Consensus 159 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T 3o0g_A 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238 (292)
T ss_dssp CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccc
Confidence 3456799999999998766 79999999999999999999887543211110000000000 0
Q ss_pred ------cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 276 ------SSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 276 ------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
........+..+..+.+|+.+||+.||++|||+++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000111223466789999999999999999999999985
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=362.24 Aligned_cols=246 Identities=16% Similarity=0.164 Sum_probs=211.0
Q ss_pred CCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCC---CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQ---SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
..+.+.+++.||+|+||+||++.++ +|+.||||++... .....+.+.+|+.+|+.++||||+++++++.+....++
T Consensus 39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 118 (350)
T 1rdq_E 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118 (350)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence 3467888999999999999999986 5999999998643 22345778999999999999999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG- 214 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 214 (497)
||||++||+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.....
T Consensus 119 v~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~ 195 (350)
T 1rdq_E 119 VMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195 (350)
T ss_dssp EEECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCB
T ss_pred EEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCccceEEECCCCCEEEcccccceeccCCc
Confidence 9999999999999975 457999999999999999999999999 999999999999999999999999999865443
Q ss_pred CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHH
Q 010932 215 KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 294 (497)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.......+... +... ...++...+..+.+||
T Consensus 196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~~~~~~~li 269 (350)
T 1rdq_E 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSG--KVRFPSHFSSDLKDLL 269 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHC--CCCCCTTCCHHHHHHH
T ss_pred ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHH----HHcC--CCCCCCCCCHHHHHHH
Confidence 456899999999999999999999999999999999999998865433222111 1111 1234556778899999
Q ss_pred HHhcccCCCCCCC-----HHHHHHH
Q 010932 295 SKCLQYEAKDRPD-----VKFLLSA 314 (497)
Q Consensus 295 ~~cl~~dp~~Rps-----~~~ll~~ 314 (497)
.+||+.||.+||+ +.+|+++
T Consensus 270 ~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 270 RNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp HHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHHhhcCHHhccCCccCCHHHHHhC
Confidence 9999999999998 8888876
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-45 Score=356.76 Aligned_cols=251 Identities=21% Similarity=0.295 Sum_probs=200.7
Q ss_pred CCcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
...|.+++.||+|+||+||+|.+.+|+.||||++....... .+.+.+|+.+|+.++||||+++++++.+....++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 46788999999999999999999889999999997543322 4678999999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---- 214 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 214 (497)
|+++ +|.+++.. ....+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 100 ~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 176 (311)
T 3niz_A 100 FMEK-DLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQHR-ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY 176 (311)
T ss_dssp CCSE-EHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC--
T ss_pred CCCC-CHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCchHhEEECCCCCEEEccCcCceecCCCcccc
Confidence 9975 78887755 3456999999999999999999999999 999999999999999999999999999865422
Q ss_pred CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc-----------c----------
Q 010932 215 KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL-----------L---------- 272 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~-----------~---------- 272 (497)
....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.............. .
T Consensus 177 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 256 (311)
T 3niz_A 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQR 256 (311)
T ss_dssp -CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSC
T ss_pred cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhc
Confidence 34567999999999976 5689999999999999999999998865322111100000 0
Q ss_pred ---ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 273 ---LMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 273 ---~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
...........+..++++.+|+.+||+.||++|||+.+++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 257 TFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp CCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000000000112345679999999999999999999999985
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=365.23 Aligned_cols=249 Identities=17% Similarity=0.213 Sum_probs=207.0
Q ss_pred CCCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCC---CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQ---SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
+++.+.+++.||+|+||+||++.... |+.||||++... .....+.+.+|+.+|+.++|||||++++++.+....++
T Consensus 13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 92 (384)
T 4fr4_A 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM 92 (384)
T ss_dssp CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 45678899999999999999999764 899999998643 23345789999999999999999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG- 214 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 214 (497)
||||+.||+|..++.. ...+++..+..++.||+.||.|||++| |+||||||+|||++.+|.+||+|||+++.....
T Consensus 93 v~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQQ--NVHFKEETVKLFICELVMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp EECCCTTEEHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 9999999999999975 567999999999999999999999999 999999999999999999999999999865433
Q ss_pred --CccccCCCCCCcccccc---CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHH
Q 010932 215 --KSYSTNLAYTPPEFLRT---GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQ 289 (497)
Q Consensus 215 --~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (497)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.......... ....+. .....++..++..
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~--~~~~~~-~~~~~~p~~~s~~ 246 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKE--IVHTFE-TTVVTYPSAWSQE 246 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHH--HHHHHH-HCCCCCCTTSCHH
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHH--HHHHHh-hcccCCCCcCCHH
Confidence 45679999999999974 458999999999999999999999885432111000 000000 1122345567788
Q ss_pred HHHHHHHhcccCCCCCCC-HHHHHHH
Q 010932 290 LVELASKCLQYEAKDRPD-VKFLLSA 314 (497)
Q Consensus 290 l~~li~~cl~~dp~~Rps-~~~ll~~ 314 (497)
+.+||.+||+.||.+||+ +.+++++
T Consensus 247 ~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 247 MVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp HHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred HHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 999999999999999998 7777653
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=359.85 Aligned_cols=250 Identities=16% Similarity=0.184 Sum_probs=207.1
Q ss_pred CCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
++.|.+++.||+|+||+||++.+.. |+.||+|++.... .....+.+|+.+|+.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 3567888999999999999999864 8999999987442 2345789999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC--CCCeeEcccCCccccCCCC--
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE--DGDPRLSSFGLMKNSRDGK-- 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~--~~~~kl~Dfgla~~~~~~~-- 215 (497)
++|++|.+++.. ....+++..+..++.||+.||.|||+++ ++||||||+|||++. ++.+||+|||+++......
T Consensus 83 ~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g-ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~ 160 (321)
T 1tki_A 83 ISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF 160 (321)
T ss_dssp CCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc
Confidence 999999999964 2457999999999999999999999999 999999999999987 7899999999998765443
Q ss_pred -ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHH
Q 010932 216 -SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 216 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 294 (497)
...||+.|+|||++.+..++.++|||||||++|+|++|..||.................. .........+..+.+|+
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~li 238 (321)
T 1tki_A 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYT--FDEEAFKEISIEAMDFV 238 (321)
T ss_dssp EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--CCHHHHTTSCHHHHHHH
T ss_pred ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCC--CChhhhccCCHHHHHHH
Confidence 356899999999999888999999999999999999999998665333221111110000 00000123567899999
Q ss_pred HHhcccCCCCCCCHHHHHHHh
Q 010932 295 SKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 295 ~~cl~~dp~~Rps~~~ll~~l 315 (497)
.+||+.||.+|||+.+++++-
T Consensus 239 ~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 239 DRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp HTTSCSSGGGSCCHHHHHHSH
T ss_pred HHHcCCChhHCcCHHHHhcCh
Confidence 999999999999999999963
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-45 Score=350.99 Aligned_cols=246 Identities=18% Similarity=0.193 Sum_probs=198.7
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--------------------------ChhHHHHHHHHhc
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--------------------------DPHQFVTEAAGLG 113 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--------------------------~~~~~~~e~~~l~ 113 (497)
++.|.+++.||+|+||+||+|.+. +|+.||||++...... ..+.+.+|+.+|+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 456788899999999999999975 4899999998654311 1357899999999
Q ss_pred cCCCCcceeeeeeeee--CCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcc
Q 010932 114 NVRHKRLVNLIGCCAE--GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYR 191 (497)
Q Consensus 114 ~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~N 191 (497)
.++||||+++++++.+ ....++||||+++++|.+++. ...+++..+..++.||+.||.|||+++ ++||||||+|
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~N 167 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQK-IIHRDIKPSN 167 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHH
Confidence 9999999999999986 567899999999999988763 467999999999999999999999999 9999999999
Q ss_pred eEeCCCCCeeEcccCCccccCCC----CccccCCCCCCccccccCC---CCcccceeehhhhHHHHhhCCCCCCchhhHH
Q 010932 192 VLFDEDGDPRLSSFGLMKNSRDG----KSYSTNLAYTPPEFLRTGR---VIPESVIYSYGTVLLDLLSGKHIPPSHALDV 264 (497)
Q Consensus 192 ill~~~~~~kl~Dfgla~~~~~~----~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slG~~l~elltg~~~~~~~~~~~ 264 (497)
||++.++.+||+|||+++..... ....||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.......
T Consensus 168 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 247 (298)
T 2zv2_A 168 LLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC 247 (298)
T ss_dssp EEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred EEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH
Confidence 99999999999999999865433 3457899999999998655 4778999999999999999999886543322
Q ss_pred HhccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 265 IRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
...... ............++.+.+|+.+||+.||++|||+.+++++
T Consensus 248 ~~~~~~----~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 248 LHSKIK----SQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp HHHHHH----HCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred HHHHHh----cccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 211111 1111111123456779999999999999999999999875
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-45 Score=369.97 Aligned_cols=247 Identities=17% Similarity=0.161 Sum_probs=205.3
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
.|.+++.||+|+||+||+|.+. +|+.||+|++...... ..+.+.+|+.+|+.++||||+++++++.+.+..++||||
T Consensus 12 ~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~ 91 (444)
T 3soa_A 12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDL 91 (444)
T ss_dssp HEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred CeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEe
Confidence 5678888999999999999975 5999999999765432 245689999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC---CCCCeeEcccCCccccCCC--
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD---EDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfgla~~~~~~-- 214 (497)
++||+|.+.+.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 92 ~~gg~L~~~i~~--~~~~~e~~~~~i~~qil~aL~~lH~~g-ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~ 168 (444)
T 3soa_A 92 VTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQMG-VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 168 (444)
T ss_dssp CBCCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc
Confidence 999999999876 567999999999999999999999999 99999999999998 5688999999999865443
Q ss_pred --CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 215 --KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 215 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
....||+.|+|||++.+..++.++|||||||++|+|++|..||................. ..........++.+.+
T Consensus 169 ~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~ 246 (444)
T 3soa_A 169 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAY--DFPSPEWDTVTPEAKD 246 (444)
T ss_dssp BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC--CCCTTTTTTSCHHHHH
T ss_pred eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCC--CCCccccccCCHHHHH
Confidence 245789999999999988999999999999999999999999866543322211111111 1111122346778999
Q ss_pred HHHHhcccCCCCCCCHHHHHHH
Q 010932 293 LASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~ 314 (497)
|+.+||+.||++|||+.+++++
T Consensus 247 li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 247 LINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp HHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHcCCChhHCCCHHHHhcC
Confidence 9999999999999999999996
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=361.53 Aligned_cols=244 Identities=19% Similarity=0.227 Sum_probs=206.1
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCC---CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQ---SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
+..|.+++.||+|+||+||+|.+. +|+.||||++... .......+.+|+.+|+.++||||+++++++.+....++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 467888999999999999999974 5899999998642 122346799999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 214 (497)
|||+ +|+|.+++.. .+.+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 88 ~E~~-~g~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~ 163 (336)
T 3h4j_B 88 IEYA-GGELFDYIVE--KKRMTEDEGRRFFQQIICAIEYCHRHK-IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF 163 (336)
T ss_dssp ECCC-CEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT
T ss_pred EECC-CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCchhhEEEcCCCCEEEEEeccceeccCCcc
Confidence 9999 7889888865 467999999999999999999999999 999999999999999999999999999865443
Q ss_pred -CccccCCCCCCccccccCCC-CcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 215 -KSYSTNLAYTPPEFLRTGRV-IPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||........ ...+.. .....+...++.+.+
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-----~~~i~~-~~~~~p~~~s~~~~~ 237 (336)
T 3h4j_B 164 LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-----FKKVNS-CVYVMPDFLSPGAQS 237 (336)
T ss_dssp TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-----BCCCCS-SCCCCCTTSCHHHHH
T ss_pred cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-----HHHHHc-CCCCCcccCCHHHHH
Confidence 35678999999999988776 6899999999999999999998854322111 111111 112345567788999
Q ss_pred HHHHhcccCCCCCCCHHHHHHH
Q 010932 293 LASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~ 314 (497)
|+.+||+.||.+|||+.+++++
T Consensus 238 li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 238 LIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp HHHTTSCSSGGGSCCHHHHTTC
T ss_pred HHHHHcCCChhHCcCHHHHHhC
Confidence 9999999999999999999986
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-45 Score=362.25 Aligned_cols=260 Identities=21% Similarity=0.289 Sum_probs=213.5
Q ss_pred HhcCCCcccccccCCCCCCcEEEEEEEcC------CcEEEEEEccCCCCCC-hhHHHHHHHHhccCCCCcceeeeeeeee
Q 010932 57 ATNGFSSELIVSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAE 129 (497)
Q Consensus 57 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~ 129 (497)
.....+.+.+++.||+|+||.||+|.+.+ ++.||||+++...... .+.+.+|+.+++.++||||+++++++..
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 33445667888999999999999999752 4899999997653222 4579999999999999999999999999
Q ss_pred CCceEEEEEcCCCCChhhhhhcCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccC
Q 010932 130 GDERLLVAQYMPNDTLSKHLFHWD----------------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDL 187 (497)
Q Consensus 130 ~~~~~lv~e~~~~~~L~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dl 187 (497)
.+..++||||+++++|.+++.... ...+++..++.++.||+.||.|||+++ ++||||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dl 200 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDL 200 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCC
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCC
Confidence 999999999999999999997532 267999999999999999999999999 999999
Q ss_pred CCcceEeCCCCCeeEcccCCccccCC------CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCch
Q 010932 188 NAYRVLFDEDGDPRLSSFGLMKNSRD------GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSH 260 (497)
Q Consensus 188 kp~Nill~~~~~~kl~Dfgla~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~ 260 (497)
||+|||++.++.+||+|||+++.... .....+|+.|+|||++.+..++.++|||||||++|+|+| |..||...
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 280 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence 99999999999999999999875322 223457889999999999999999999999999999999 88887654
Q ss_pred hhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhccc
Q 010932 261 ALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQT 322 (497)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~ 322 (497)
........ +........+..++..+.+|+.+||+.||++|||+.+++++|+.+....
T Consensus 281 ~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 281 AHEEVIYY-----VRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp CHHHHHHH-----HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred ChHHHHHH-----HhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 33222111 1111122345566778999999999999999999999999999987654
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-45 Score=346.33 Aligned_cols=255 Identities=17% Similarity=0.274 Sum_probs=211.9
Q ss_pred CCCcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeC--CceEE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEG--DERLL 135 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 135 (497)
.++.+.+++.||+|+||+||+|.++ |+.||||++....... .+.+.+|+.++++++||||+++++++.+. ...++
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 8 DFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred CHHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 4567788899999999999999985 8899999998654322 45799999999999999999999999877 78899
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQN-RKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
||||+++++|.+++.......+++..+..++.||+.||.|||+++ +++||||||+|||++.++.++|+|||++.... .
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~-~ 165 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ-S 165 (271)
T ss_dssp EEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS-C
T ss_pred eecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeec-c
Confidence 999999999999998755557999999999999999999999864 38999999999999999999999998876433 2
Q ss_pred CccccCCCCCCccccccCCCCc---ccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHH
Q 010932 215 KSYSTNLAYTPPEFLRTGRVIP---ESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~~~~~~---~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (497)
....+|+.|+|||++.+..++. ++|||||||++|+|++|+.||........... ..........+...+..+.
T Consensus 166 ~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 241 (271)
T 3kmu_A 166 PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMK----VALEGLRPTIPPGISPHVS 241 (271)
T ss_dssp TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHH----HHHSCCCCCCCTTCCHHHH
T ss_pred cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHH----HHhcCCCCCCCCCCCHHHH
Confidence 3457899999999998765554 79999999999999999998865433222111 1112223344556778899
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 292 ELASKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
+++.+||+.||++|||+.++++.|+.+..
T Consensus 242 ~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 242 KLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 99999999999999999999999998764
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-45 Score=360.95 Aligned_cols=246 Identities=18% Similarity=0.221 Sum_probs=208.5
Q ss_pred CCCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCC---CCCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQ---SWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 134 (497)
..+++.+++.||+|+||+||+|..+. |+.||||+++.. .....+.+..|..+|..+ +||||+++++++.+.+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 35677889999999999999999875 899999999753 223456789999999988 7999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC-
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD- 213 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~- 213 (497)
+||||++||+|.+++.. .+.+++..++.++.||+.||.|||++| |+||||||+|||++.+|.+||+|||+++....
T Consensus 98 lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 99999999999999975 457999999999999999999999999 99999999999999999999999999985322
Q ss_pred ---CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHH
Q 010932 214 ---GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290 (497)
Q Consensus 214 ---~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (497)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||.......+... +... ...+|...+..+
T Consensus 175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~s~~~ 248 (353)
T 2i0e_A 175 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS----IMEH--NVAYPKSMSKEA 248 (353)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHC--CCCCCTTSCHHH
T ss_pred CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHH----HHhC--CCCCCCCCCHHH
Confidence 2356789999999999999999999999999999999999999876543322211 1111 123455677889
Q ss_pred HHHHHHhcccCCCCCCC-----HHHHHHH
Q 010932 291 VELASKCLQYEAKDRPD-----VKFLLSA 314 (497)
Q Consensus 291 ~~li~~cl~~dp~~Rps-----~~~ll~~ 314 (497)
.+||.+||+.||.+||+ +.+++++
T Consensus 249 ~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 249 VAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp HHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred HHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 99999999999999995 5777775
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=363.04 Aligned_cols=246 Identities=18% Similarity=0.230 Sum_probs=207.0
Q ss_pred CCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC---CCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS---WPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 134 (497)
..+++.+++.||+|+||+||+|.++ +|+.||||+++... ....+.+..|..+|..+ +||||+++++++.+....+
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 3466788899999999999999986 48999999997532 23456788999999876 8999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC-
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD- 213 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~- 213 (497)
+||||++||+|.+++.. .+.+++..+..++.||+.||.|||+++ ++||||||+|||++.+|.+||+|||+++....
T Consensus 95 lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 171 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171 (345)
T ss_dssp EEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence 99999999999999975 467999999999999999999999999 99999999999999999999999999985422
Q ss_pred ---CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHH
Q 010932 214 ---GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290 (497)
Q Consensus 214 ---~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (497)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.......+.... ... ...++...+..+
T Consensus 172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i----~~~--~~~~p~~~s~~~ 245 (345)
T 1xjd_A 172 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI----RMD--NPFYPRWLEKEA 245 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----HHC--CCCCCTTSCHHH
T ss_pred CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHH----HhC--CCCCCcccCHHH
Confidence 23567899999999999999999999999999999999999998765433222111 111 123445567889
Q ss_pred HHHHHHhcccCCCCCCCHH-HHHHH
Q 010932 291 VELASKCLQYEAKDRPDVK-FLLSA 314 (497)
Q Consensus 291 ~~li~~cl~~dp~~Rps~~-~ll~~ 314 (497)
.+||.+||+.||++||++. +++++
T Consensus 246 ~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 246 KDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp HHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred HHHHHHHhcCCHhHcCCChHHHHcC
Confidence 9999999999999999987 66553
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=359.59 Aligned_cols=249 Identities=17% Similarity=0.137 Sum_probs=204.1
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
++.|.+++.||+|+||+||+|.+. +++.||||++...... ..+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 457888999999999999999986 5999999999654332 24678999999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC-----
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----- 213 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 213 (497)
|+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++....
T Consensus 86 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 86 YCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp CCTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cCCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 9999999999864 567999999999999999999999999 99999999999999999999999999975422
Q ss_pred -CCccccCCCCCCccccccCCC-CcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHH
Q 010932 214 -GKSYSTNLAYTPPEFLRTGRV-IPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291 (497)
Q Consensus 214 -~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (497)
.....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.......... ................+..+.
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 239 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY---SDWKEKKTYLNPWKKIDSAPL 239 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHH---HHHHTTCTTSTTGGGSCHHHH
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHH---HHHhcccccCCccccCCHHHH
Confidence 134678999999999987775 779999999999999999999886432211110 011111111112244667899
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHh
Q 010932 292 ELASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps~~~ll~~l 315 (497)
+|+.+||+.||++|||+.+++++-
T Consensus 240 ~li~~~L~~dP~~R~t~~eil~h~ 263 (323)
T 3tki_A 240 ALLHKILVENPSARITIPDIKKDR 263 (323)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred HHHHHHccCChhhCcCHHHHhhCh
Confidence 999999999999999999999864
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-45 Score=361.03 Aligned_cols=247 Identities=18% Similarity=0.171 Sum_probs=205.2
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
.|.+++.||+|+||+||+|.++ +|+.||||++...... ..+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 30 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~ 109 (362)
T 2bdw_A 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 109 (362)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred CeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 4678888999999999999986 4899999999765432 235788999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC---CCeeEcccCCccccCCC--
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED---GDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfgla~~~~~~-- 214 (497)
+++++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||++......
T Consensus 110 ~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~ 186 (362)
T 2bdw_A 110 VTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 186 (362)
T ss_dssp CCSCBHHHHHTT--CSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCS
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcc
Confidence 999999999865 567999999999999999999999999 9999999999999865 45999999999865543
Q ss_pred -CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHH
Q 010932 215 -KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVEL 293 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 293 (497)
....||+.|+|||++.+..++.++|||||||++|+|++|..||................. ..........+..+.+|
T Consensus 187 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~l 264 (362)
T 2bdw_A 187 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY--DYPSPEWDTVTPEAKSL 264 (362)
T ss_dssp CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCTTGGGGSCHHHHHH
T ss_pred cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC--CCCcccccCCCHHHHHH
Confidence 245789999999999988999999999999999999999998865433222111111000 00111123457789999
Q ss_pred HHHhcccCCCCCCCHHHHHHH
Q 010932 294 ASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 294 i~~cl~~dp~~Rps~~~ll~~ 314 (497)
|.+||+.||++|||+.+++++
T Consensus 265 i~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 265 IDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp HHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHHcCCChhhCcCHHHHhcC
Confidence 999999999999999999986
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=359.55 Aligned_cols=253 Identities=18% Similarity=0.240 Sum_probs=205.4
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-Cc----EEEEEEccCCC-CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NR----LVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
..+.+++.||+|+||+||+|.+.. |+ .||+|.+.... ....+.+.+|+.++++++||||+++++++... ..++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEE
Confidence 356788889999999999999753 44 46888886433 23457899999999999999999999999875 4789
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK 215 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 215 (497)
|+||+++|+|.+++... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++......
T Consensus 94 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 171 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EEECCTTCBHHHHHHHS-TTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred EEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence 99999999999999763 567999999999999999999999999 9999999999999999999999999997543321
Q ss_pred ------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHH
Q 010932 216 ------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288 (497)
Q Consensus 216 ------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (497)
...+|+.|+|||++.+..++.++|||||||++|||+| |+.||....... +...+........+..++.
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 246 (327)
T 3poz_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----ISSILEKGERLPQPPICTI 246 (327)
T ss_dssp C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-----HHHHHHTTCCCCCCTTBCH
T ss_pred ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH-----HHHHHHcCCCCCCCccCCH
Confidence 2345778999999999999999999999999999999 888875432222 1222222233344566778
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHhhhhhccc
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQT 322 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~ 322 (497)
.+.+|+.+||+.||++|||+.+++++|+.+...+
T Consensus 247 ~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~ 280 (327)
T 3poz_A 247 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp HHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhh
Confidence 8999999999999999999999999999987653
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-45 Score=365.75 Aligned_cols=254 Identities=19% Similarity=0.302 Sum_probs=212.0
Q ss_pred CcccccccCCCCCCcEEEEEEEc--------CCcEEEEEEccCCCCC-ChhHHHHHHHHhccC-CCCcceeeeeeeeeCC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK--------NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGD 131 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 131 (497)
+.+.+.+.||+|+||+||+|.+. .+..||||++...... ..+.+.+|+++++.+ +||||+++++++...+
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 46678889999999999999963 2457999999765322 236789999999999 8999999999999999
Q ss_pred ceEEEEEcCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC
Q 010932 132 ERLLVAQYMPNDTLSKHLFHWD--------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197 (497)
Q Consensus 132 ~~~lv~e~~~~~~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~ 197 (497)
..++||||+++++|.+++.... ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.+
T Consensus 149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~ 227 (382)
T 3tt0_A 149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTED 227 (382)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTT
T ss_pred ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCcceEEEcCC
Confidence 9999999999999999997643 245999999999999999999999999 9999999999999999
Q ss_pred CCeeEcccCCccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhcccc
Q 010932 198 GDPRLSSFGLMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNL 270 (497)
Q Consensus 198 ~~~kl~Dfgla~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~ 270 (497)
+.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|+|++ |..|+.......+.
T Consensus 228 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~---- 303 (382)
T 3tt0_A 228 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF---- 303 (382)
T ss_dssp CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH----
T ss_pred CcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH----
Confidence 99999999999865432 23456788999999999999999999999999999999 88887654333221
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 271 LLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
..+........+..++..+.+|+.+||+.||++|||+.+|+++|+.+...
T Consensus 304 -~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 353 (382)
T 3tt0_A 304 -KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 353 (382)
T ss_dssp -HHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -HHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 11222223334455678899999999999999999999999999998754
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-45 Score=346.38 Aligned_cols=251 Identities=19% Similarity=0.262 Sum_probs=200.4
Q ss_pred CCCcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCC----ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWP----DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
+++.+.+.+.||+|+||+||+|.+. |+.||||++...... ..+.+.+|+.+++.++||||+++++++...+..++
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (271)
T 3dtc_A 5 DFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL 83 (271)
T ss_dssp CTTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred chhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence 4567888899999999999999985 889999998754322 24679999999999999999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC--CcccccCCCcceEeCC--------CCCeeEccc
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQN--RKLYHDLNAYRVLFDE--------DGDPRLSSF 205 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~--~iiH~Dlkp~Nill~~--------~~~~kl~Df 205 (497)
||||+++++|.+++. ...+++..+..++.|++.||.|||+++ +++||||||+|||++. ++.+||+||
T Consensus 84 v~e~~~~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 84 VMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EEECCTTEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EEEcCCCCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 999999999999984 468999999999999999999999987 3789999999999986 778999999
Q ss_pred CCccccCCC--CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCC
Q 010932 206 GLMKNSRDG--KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA 283 (497)
Q Consensus 206 gla~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (497)
|+++..... ....||+.|+|||++.+..++.++||||||+++|+|++|+.||........... ..........+
T Consensus 161 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~ 236 (271)
T 3dtc_A 161 GLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYG----VAMNKLALPIP 236 (271)
T ss_dssp CC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHH----HHTSCCCCCCC
T ss_pred CcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHh----hhcCCCCCCCC
Confidence 999854433 345789999999999999999999999999999999999998865432222111 11112223345
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhh
Q 010932 284 NEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 284 ~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
..++..+.+++.+||+.||.+|||+.+++++|+.+
T Consensus 237 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 237 STCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred cccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 56678899999999999999999999999999764
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-44 Score=344.88 Aligned_cols=252 Identities=19% Similarity=0.356 Sum_probs=206.6
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC-------hhHHHHHHHHhccCCCCcceeeeeeeeeCCce
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD-------PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 133 (497)
..+.+++.||+|+||+||+|.+. +++.||||++....... .+.+.+|+.+++.++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 56788889999999999999985 58999999997544332 167899999999999999999999987654
Q ss_pred EEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCC-cccccCCCcceEeCCCCC-----eeEcccCC
Q 010932 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNR-KLYHDLNAYRVLFDEDGD-----PRLSSFGL 207 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~-iiH~Dlkp~Nill~~~~~-----~kl~Dfgl 207 (497)
++||||+++++|.+++.. ....+++..+..++.|++.||.|||++++ ++||||||+|||++.++. +||+|||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~ 175 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175 (287)
T ss_dssp EEEEECCTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred eEEEEecCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence 799999999999998865 35679999999999999999999999864 999999999999988776 99999999
Q ss_pred ccccCCC-CccccCCCCCCccccc--cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCH
Q 010932 208 MKNSRDG-KSYSTNLAYTPPEFLR--TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYAN 284 (497)
Q Consensus 208 a~~~~~~-~~~~gt~~y~aPE~~~--~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (497)
++..... ....||+.|+|||++. ...++.++|||||||++|+|++|+.||.......... .............+.
T Consensus 176 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~ 253 (287)
T 4f0f_A 176 SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF--INMIREEGLRPTIPE 253 (287)
T ss_dssp CBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHH--HHHHHHSCCCCCCCT
T ss_pred cccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHH--HHHHhccCCCCCCCc
Confidence 9855443 3467899999999984 4567899999999999999999999885432211110 111122223334556
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhh
Q 010932 285 EDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 285 ~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
.+++.+.+|+.+||+.||++|||+.++++.|+.+
T Consensus 254 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 254 DCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 6778899999999999999999999999998764
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=352.52 Aligned_cols=256 Identities=17% Similarity=0.198 Sum_probs=207.3
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCC-CCChhHHHHHHHHhccCCCCcceeeeeeeeeCC--ceEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD--ERLLVA 137 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv~ 137 (497)
..|.+++.||+|+||+||+|.+.. |+.||||++.... ....+.+.+|+++|++++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 357788899999999999999865 9999999997543 234577899999999999999999999998765 789999
Q ss_pred EcCCCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEe----CCCCCeeEcccCCccccC
Q 010932 138 QYMPNDTLSKHLFHWD-KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF----DEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfgla~~~~ 212 (497)
||+++++|.+++.... ...+++..+..++.||+.||.|||+.+ ++||||||+|||+ +.++.+||+|||+++...
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~ 167 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence 9999999999997532 234999999999999999999999999 9999999999999 778889999999998654
Q ss_pred CC---CccccCCCCCCccccc--------cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccccc-------
Q 010932 213 DG---KSYSTNLAYTPPEFLR--------TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLM------- 274 (497)
Q Consensus 213 ~~---~~~~gt~~y~aPE~~~--------~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~------- 274 (497)
.. ....||+.|+|||++. +..++.++|||||||++|||+||+.||............+..++
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~ 247 (319)
T 4euu_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247 (319)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTC
T ss_pred CCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCccc
Confidence 43 2456899999999986 57789999999999999999999988743211100000000000
Q ss_pred ----------------ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhh
Q 010932 275 ----------------DSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 275 ----------------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
........+...+..+.+|+.+||+.||++|||+.+++++...-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred chhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 00111234567888999999999999999999999999987654
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-45 Score=349.62 Aligned_cols=250 Identities=18% Similarity=0.225 Sum_probs=200.8
Q ss_pred CcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
..|.+++.||+|+||+||+|...+|+.||||++..... ...+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 46788899999999999999997799999999865432 2246789999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----C
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----K 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 215 (497)
+++ +|.+++... .+.+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (288)
T 1ob3_A 82 LDQ-DLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT 158 (288)
T ss_dssp CSE-EHHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred cCC-CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEeECccccccCccccccc
Confidence 975 898888652 467999999999999999999999999 999999999999999999999999998754322 3
Q ss_pred ccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc-----------c-----cccccc
Q 010932 216 SYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL-----------L-----LMDSSL 278 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~-----------~-----~~~~~~ 278 (497)
...+|+.|+|||++.+. .++.++|||||||++|+|++|+.||.............. . ..++..
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T 1ob3_A 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (288)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccccc
Confidence 34679999999999764 589999999999999999999998865432211100000 0 000000
Q ss_pred -------CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 279 -------EGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 279 -------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
........++.+.+|+.+||+.||++|||+.+++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 001123456789999999999999999999999975
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-45 Score=374.32 Aligned_cols=252 Identities=23% Similarity=0.318 Sum_probs=209.2
Q ss_pred CcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
+.+.+.+.||+|+||.||+|.++++..||||+++... ...+.|.+|+.+|++++||||+++++++.. +..++||||++
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~ 261 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 261 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhc
Confidence 3456778899999999999999888889999998654 346789999999999999999999999876 67899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-----Cc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-----KS 216 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 216 (497)
+|+|.+++.......+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ..
T Consensus 262 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 340 (452)
T 1fmk_A 262 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340 (452)
T ss_dssp TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEECCCCCEEECCCccceecCCCceecccC
Confidence 999999996543467999999999999999999999999 999999999999999999999999999865432 12
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
..+|+.|+|||++.+..++.++|||||||++|||+| |+.|+......... ..+....+...+..+++.+.+|+.
T Consensus 341 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~l~~li~ 415 (452)
T 1fmk_A 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-----DQVERGYRMPCPPECPESLHDLMC 415 (452)
T ss_dssp --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-----HHHHTTCCCCCCTTSCHHHHHHHH
T ss_pred CcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHcCCCCCCCCCCCHHHHHHHH
Confidence 345678999999999999999999999999999999 88877654322211 111222233455667888999999
Q ss_pred HhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 296 KCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
+||+.||++|||+.+|++.|+.+...
T Consensus 416 ~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 416 QCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred HHccCChhhCcCHHHHHHHHHHHhcc
Confidence 99999999999999999999988644
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-45 Score=367.10 Aligned_cols=256 Identities=20% Similarity=0.177 Sum_probs=210.3
Q ss_pred HHHHhcCCCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCC---CCCChhHHHHHHHHhccCCCCcceeeeeeeee
Q 010932 54 LRAATNGFSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQ---SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE 129 (497)
Q Consensus 54 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 129 (497)
+.........+.+++.||+|+||+||+|.++. |+.||||+++.. .....+.+.+|+.+++.++|||||++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 33344455678889999999999999999864 899999998642 12234568999999999999999999999999
Q ss_pred CCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 130 GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 130 ~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
....++||||++||+|.+++.. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CCEEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeeECCCCCEEEeccceeE
Confidence 9999999999999999999864 46899999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCC-----CccccCCCCCCccccccCC----CCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCC
Q 010932 210 NSRDG-----KSYSTNLAYTPPEFLRTGR----VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEG 280 (497)
Q Consensus 210 ~~~~~-----~~~~gt~~y~aPE~~~~~~----~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (497)
..... ....||+.|+|||++.+.. ++.++|||||||++|||++|+.||................. ....
T Consensus 217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~--~~~~ 294 (410)
T 3v8s_A 217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN--SLTF 294 (410)
T ss_dssp ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHH--HCCC
T ss_pred eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccc--cccC
Confidence 65443 2567999999999998655 88999999999999999999999876543322211111000 0111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHh
Q 010932 281 QYANEDATQLVELASKCLQYEAKD--RPDVKFLLSAV 315 (497)
Q Consensus 281 ~~~~~~~~~l~~li~~cl~~dp~~--Rps~~~ll~~l 315 (497)
+.....+..+.+||.+||+.+|.+ ||++.+|++|-
T Consensus 295 p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp 331 (410)
T 3v8s_A 295 PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 331 (410)
T ss_dssp CTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSG
T ss_pred CCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCc
Confidence 112246778999999999999998 99999999973
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-45 Score=355.01 Aligned_cols=253 Identities=18% Similarity=0.276 Sum_probs=210.8
Q ss_pred CcccccccCCCCCCcEEEEEEEc------CCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK------NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 134 (497)
+.+.+.+.||+|+||.||++.+. ++..||||++..... ...+.+.+|+.+|+.++||||+++++++...+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 102 (314)
T 2ivs_A 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLL 102 (314)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceE
Confidence 45677888999999999999862 358999999975432 22467899999999999999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCCC----------------------CCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcce
Q 010932 135 LVAQYMPNDTLSKHLFHWDK----------------------QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRV 192 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~----------------------~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Ni 192 (497)
+||||+++++|.+++..... ..+++..+..++.||+.||.|||+++ ++||||||+||
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dikp~NI 181 (314)
T 2ivs_A 103 LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK-LVHRDLAARNI 181 (314)
T ss_dssp EEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGE
T ss_pred EEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC-CcccccchheE
Confidence 99999999999999975322 34899999999999999999999999 99999999999
Q ss_pred EeCCCCCeeEcccCCccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHH
Q 010932 193 LFDEDGDPRLSSFGLMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVI 265 (497)
Q Consensus 193 ll~~~~~~kl~Dfgla~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~ 265 (497)
|++.++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||........
T Consensus 182 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~ 261 (314)
T 2ivs_A 182 LVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL 261 (314)
T ss_dssp EEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 9999999999999999865432 22345778999999999999999999999999999999 8888765432221
Q ss_pred hccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
...+........+..+++.+.+|+.+||+.||++|||+.+++++|+.+..
T Consensus 262 -----~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 262 -----FNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp -----HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----HHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11122222334455677889999999999999999999999999998764
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-45 Score=359.03 Aligned_cols=249 Identities=19% Similarity=0.257 Sum_probs=204.9
Q ss_pred CCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCC---hhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPD---PHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 135 (497)
..++.+++.||+|+||+||+++++. |+.||||++....... .+.+.+|+.++.++ +||||+++++++.+....++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 3567888999999999999999864 8999999997654333 34688999999888 89999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC--
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD-- 213 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 213 (497)
||||++||+|..++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 88 v~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp EECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 9999999999999865 467999999999999999999999999 99999999999999999999999999985322
Q ss_pred --CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhc----ccc-ccccccccCCCCCHHH
Q 010932 214 --GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRG----KNL-LLLMDSSLEGQYANED 286 (497)
Q Consensus 214 --~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~ 286 (497)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ..+ ..+... ...+|...
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~ 242 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPRSL 242 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC--CCCCCTTS
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC--CCCCCCCC
Confidence 235678999999999999999999999999999999999999885321100000 000 011111 12345567
Q ss_pred HHHHHHHHHHhcccCCCCCCCH------HHHHHH
Q 010932 287 ATQLVELASKCLQYEAKDRPDV------KFLLSA 314 (497)
Q Consensus 287 ~~~l~~li~~cl~~dp~~Rps~------~~ll~~ 314 (497)
+..+.+|+.+||+.||.+||++ .+++++
T Consensus 243 s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 243 SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp CHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred CHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 7889999999999999999985 677664
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=360.84 Aligned_cols=260 Identities=20% Similarity=0.242 Sum_probs=212.2
Q ss_pred CcccccccCCCCCCcEEEEEEE-----cCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeee--eCCceE
Q 010932 62 SSELIVSESGDKAPNVVYRGRL-----KNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA--EGDERL 134 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~ 134 (497)
..+.+++.||+|+||.||++.+ .+++.||||++........+.+.+|++++++++||||+++++++. +....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 4667888999999999999984 348899999998765444567999999999999999999999886 446689
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
+||||+++++|.+++... ...+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||+++.....
T Consensus 103 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 180 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRR-CVHRDLAARNILVESEAHVKIADFGLAKLLPLD 180 (327)
T ss_dssp EEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred EEEeecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence 999999999999999652 346999999999999999999999999 999999999999999999999999999865433
Q ss_pred C-------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc----------ccccccccc
Q 010932 215 K-------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK----------NLLLLMDSS 277 (497)
Q Consensus 215 ~-------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~----------~~~~~~~~~ 277 (497)
. ...+|+.|+|||++.+..++.++|||||||++|+|++|+.||........... .....+...
T Consensus 181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (327)
T 3lxl_A 181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEG 260 (327)
T ss_dssp CSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTT
T ss_pred CccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcc
Confidence 2 23567789999999999999999999999999999999988755433221111 111222223
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcccc
Q 010932 278 LEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323 (497)
Q Consensus 278 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~ 323 (497)
.....+..++..+.+|+.+||+.||++|||+.+++++|+.+.....
T Consensus 261 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 261 QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 3344556678889999999999999999999999999998865443
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=351.05 Aligned_cols=255 Identities=16% Similarity=0.280 Sum_probs=202.6
Q ss_pred CCCcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
+++.+.+.+.||+|+||+||++.+. ++.||||++... ...+.|.+|+.+|++++||||+++++++.+ ..++||||
T Consensus 6 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~ 80 (307)
T 2eva_A 6 DYKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEY 80 (307)
T ss_dssp CGGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEEC
T ss_pred CHhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEc
Confidence 3456788889999999999999985 788999999643 245789999999999999999999998874 57999999
Q ss_pred CCCCChhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHc---CCCcccccCCCcceEeCCCCC-eeEcccCCccccCCC
Q 010932 140 MPNDTLSKHLFHWDK-QPLPWEMRVRVAYYIAQALDHCNS---QNRKLYHDLNAYRVLFDEDGD-PRLSSFGLMKNSRDG 214 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~-~~l~~~~~~~i~~~i~~~L~~lh~---~~~iiH~Dlkp~Nill~~~~~-~kl~Dfgla~~~~~~ 214 (497)
+++++|.+++..... ..+++..+..++.||+.||.|||+ ++ ++||||||+|||++.++. +||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~-ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA-LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSC-CCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCC-eecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 999999999975322 357899999999999999999999 77 999999999999998887 799999999765433
Q ss_pred -CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHH
Q 010932 215 -KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVEL 293 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 293 (497)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||......... .............+..++..+.+|
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~l 236 (307)
T 2eva_A 160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR---IMWAVHNGTRPPLIKNLPKPIESL 236 (307)
T ss_dssp -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHH---HHHHHHTTCCCCCBTTCCHHHHHH
T ss_pred cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHH---HHHHHhcCCCCCcccccCHHHHHH
Confidence 3456899999999999999999999999999999999999988543211100 000011111223344566789999
Q ss_pred HHHhcccCCCCCCCHHHHHHHhhhhhcccc
Q 010932 294 ASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323 (497)
Q Consensus 294 i~~cl~~dp~~Rps~~~ll~~l~~~~~~~~ 323 (497)
+.+||+.||++|||+.++++.|+.+.+...
T Consensus 237 i~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 266 (307)
T 2eva_A 237 MTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266 (307)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred HHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999876543
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-45 Score=364.09 Aligned_cols=249 Identities=16% Similarity=0.160 Sum_probs=207.9
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
+.|.+++.||+|+||+||+|..+ +|+.||+|++..........+.+|+.+|+.++||||+++++++.+....++||||+
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 130 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 130 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence 45788889999999999999986 58999999997654334567999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC--CCCeeEcccCCccccCCCC---
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE--DGDPRLSSFGLMKNSRDGK--- 215 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~--~~~~kl~Dfgla~~~~~~~--- 215 (497)
++++|.+++.. ....+++..+..++.||+.||.|||+++ ++||||||+|||++. ++.+||+|||+++......
T Consensus 131 ~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~ 208 (387)
T 1kob_A 131 SGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK 208 (387)
T ss_dssp CCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEE
T ss_pred CCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccchHHeEEecCCCCceEEEecccceecCCCccee
Confidence 99999999864 2457999999999999999999999999 999999999999974 5789999999998765432
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
...||+.|+|||++.+..++.++|||||||++|+|++|..||.............. .............+..+.+||.
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~s~~~~~li~ 286 (387)
T 1kob_A 209 VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKR--CDWEFDEDAFSSVSPEAKDFIK 286 (387)
T ss_dssp EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHH--CCCCCCSSTTTTSCHHHHHHHH
T ss_pred eeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHh--CCCCCCccccccCCHHHHHHHH
Confidence 34689999999999999999999999999999999999998865432221111000 0111112223456778999999
Q ss_pred HhcccCCCCCCCHHHHHHH
Q 010932 296 KCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~ 314 (497)
+||+.||++|||+.+++++
T Consensus 287 ~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 287 NLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTSCSSGGGSCCHHHHHTS
T ss_pred HHcCCChhHCcCHHHHhhC
Confidence 9999999999999999986
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=363.25 Aligned_cols=252 Identities=18% Similarity=0.175 Sum_probs=203.3
Q ss_pred CcccccccCCCC--CCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 62 SSELIVSESGDK--APNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 62 ~~~~~~~~lg~G--~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
..|.+++.||+| +||+||++.++ +|+.||||++....... .+.+.+|+.+++.++|||||++++++.+.+..++|
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 104 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV 104 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEE
Confidence 467888999999 99999999986 59999999997543222 35688899999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC---
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD--- 213 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 213 (497)
|||+++++|.+++.......+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||.+.....
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~ 183 (389)
T 3gni_B 105 TSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQ 183 (389)
T ss_dssp EECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCGGGCEECEETTE
T ss_pred EEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccccceeeccccc
Confidence 99999999999998755678999999999999999999999999 99999999999999999999999998753211
Q ss_pred --------CCccccCCCCCCcccccc--CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc----ccccc---
Q 010932 214 --------GKSYSTNLAYTPPEFLRT--GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL----LLMDS--- 276 (497)
Q Consensus 214 --------~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~----~~~~~--- 276 (497)
.....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.............. ...+.
T Consensus 184 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (389)
T 3gni_B 184 RQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTI 263 (389)
T ss_dssp ECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------------
T ss_pred cccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccccc
Confidence 123467889999999987 5789999999999999999999998865321111100000 00000
Q ss_pred ---------------------------------ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 277 ---------------------------------SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 277 ---------------------------------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
......+...++.+.+||.+||+.||++|||+.+++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 264 PAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 00011233456789999999999999999999999986
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=355.04 Aligned_cols=244 Identities=16% Similarity=0.203 Sum_probs=196.5
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCC---------
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD--------- 131 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--------- 131 (497)
.+.+++.||+|+||.||+|.++ +|+.||||++...... ..+.+.+|+.+|++++||||+++++++.+..
T Consensus 7 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 86 (332)
T 3qd2_B 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMD 86 (332)
T ss_dssp HEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHH
T ss_pred cCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhh
Confidence 5678888999999999999986 6999999999754433 3567999999999999999999999986643
Q ss_pred ------------------------------------------------ceEEEEEcCCCCChhhhhhcCCC-CCCCHHHH
Q 010932 132 ------------------------------------------------ERLLVAQYMPNDTLSKHLFHWDK-QPLPWEMR 162 (497)
Q Consensus 132 ------------------------------------------------~~~lv~e~~~~~~L~~~l~~~~~-~~l~~~~~ 162 (497)
..++||||+++++|.+++..... ...++..+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~ 166 (332)
T 3qd2_B 87 EIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVC 166 (332)
T ss_dssp C--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHH
T ss_pred hhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHH
Confidence 27999999999999999976322 34667788
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----------------CccccCCCCCCc
Q 010932 163 VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----------------KSYSTNLAYTPP 226 (497)
Q Consensus 163 ~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----------------~~~~gt~~y~aP 226 (497)
..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ....||+.|+||
T Consensus 167 ~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 245 (332)
T 3qd2_B 167 LHIFIQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSP 245 (332)
T ss_dssp HHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCH
T ss_pred HHHHHHHHHHHHHHHhCC-eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccCh
Confidence 999999999999999999 999999999999999999999999999865432 234689999999
Q ss_pred cccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 010932 227 EFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306 (497)
Q Consensus 227 E~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 306 (497)
|++.+..++.++|||||||++|+|++|..|+.... .... ..............++.+.+|+.+||+.||++||
T Consensus 246 E~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 318 (332)
T 3qd2_B 246 EQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV-RIIT------DVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERP 318 (332)
T ss_dssp HHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH-HHHH------HHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSC
T ss_pred HHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH-HHHH------HhhccCCCcccccCChhHHHHHHHHccCCCCcCC
Confidence 99999999999999999999999999876432111 1000 0000011111234556789999999999999999
Q ss_pred CHHHHHHH
Q 010932 307 DVKFLLSA 314 (497)
Q Consensus 307 s~~~ll~~ 314 (497)
|+.+++++
T Consensus 319 s~~~~l~~ 326 (332)
T 3qd2_B 319 EATDIIEN 326 (332)
T ss_dssp CHHHHHHS
T ss_pred CHHHHhhc
Confidence 99999985
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-45 Score=364.53 Aligned_cols=256 Identities=18% Similarity=0.259 Sum_probs=208.6
Q ss_pred CCCcccccccCCCCCCcEEEEEEEc------CCcEEEEEEccCCCCC-ChhHHHHHHHHhccC-CCCcceeeeeeeeeCC
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLK------NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGD 131 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 131 (497)
..+.+.+++.||+|+||.||+|.+. +++.||||+++..... ..+.+.+|++++.++ +||||+++++++...+
T Consensus 20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 99 (359)
T 3vhe_A 20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 99 (359)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC
Confidence 3456678889999999999999842 3689999999764322 235799999999999 7999999999998755
Q ss_pred -ceEEEEEcCCCCChhhhhhcCCC--------------------------------------------------------
Q 010932 132 -ERLLVAQYMPNDTLSKHLFHWDK-------------------------------------------------------- 154 (497)
Q Consensus 132 -~~~lv~e~~~~~~L~~~l~~~~~-------------------------------------------------------- 154 (497)
..++||||+++|+|.+++.....
T Consensus 100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (359)
T 3vhe_A 100 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 179 (359)
T ss_dssp SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------------
T ss_pred CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhc
Confidence 48999999999999999975422
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC------CccccC
Q 010932 155 --------QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG------KSYSTN 220 (497)
Q Consensus 155 --------~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------~~~~gt 220 (497)
..+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ....+|
T Consensus 180 ~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t 258 (359)
T 3vhe_A 180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258 (359)
T ss_dssp ----CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEEC
T ss_pred ccccchhccccCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCC
Confidence 12899999999999999999999999 999999999999999999999999999854332 234568
Q ss_pred CCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcc
Q 010932 221 LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299 (497)
Q Consensus 221 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 299 (497)
+.|+|||++.+..++.++|||||||++|||+| |..||........ ....+........+...++.+.+++.+||+
T Consensus 259 ~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 334 (359)
T 3vhe_A 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----FCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 334 (359)
T ss_dssp GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH----HHHHHHHTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred ceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH----HHHHHHcCCCCCCCCCCCHHHHHHHHHHcc
Confidence 89999999999999999999999999999998 8888765322111 111111222233455567789999999999
Q ss_pred cCCCCCCCHHHHHHHhhhhhc
Q 010932 300 YEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 300 ~dp~~Rps~~~ll~~l~~~~~ 320 (497)
.||.+|||+.+++++|+.+.+
T Consensus 335 ~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 335 GEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp SSGGGSCCHHHHHHHHHHHHH
T ss_pred CChhhCCCHHHHHHHHHHHHH
Confidence 999999999999999998864
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-45 Score=349.72 Aligned_cols=256 Identities=21% Similarity=0.349 Sum_probs=217.2
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
+.+.+.+.||+|+||+||+|.+.. +..||||++.... ...+.+.+|+.+++.++||||+++++++.+....++||||+
T Consensus 13 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 91 (288)
T 3kfa_A 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 91 (288)
T ss_dssp GGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred cceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcC
Confidence 456788889999999999999875 8899999997543 34578999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-----
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK----- 215 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 215 (497)
++++|.+++.......+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 92 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 170 (288)
T 3kfa_A 92 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170 (288)
T ss_dssp TTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT-CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEET
T ss_pred CCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC-ccCCCCCcceEEEcCCCCEEEccCccceeccCCcccccc
Confidence 9999999998766678999999999999999999999999 9999999999999999999999999998655432
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 294 (497)
...+|+.|+|||++.+..++.++||||||+++|+|++ |..|+........ ...+........+..+++.+.+|+
T Consensus 171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~li 245 (288)
T 3kfa_A 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV-----YELLEKDYRMERPEGCPEKVYELM 245 (288)
T ss_dssp TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH-----HHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred CCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHhccCCCCCCCCCCHHHHHHH
Confidence 2345778999999999999999999999999999999 8877754322211 112222233344556778899999
Q ss_pred HHhcccCCCCCCCHHHHHHHhhhhhccccc
Q 010932 295 SKCLQYEAKDRPDVKFLLSAVAPLQKQTEV 324 (497)
Q Consensus 295 ~~cl~~dp~~Rps~~~ll~~l~~~~~~~~~ 324 (497)
.+||+.||.+|||+.++++.|+.+......
T Consensus 246 ~~~l~~dp~~Rps~~~~~~~l~~~~~~~~~ 275 (288)
T 3kfa_A 246 RACWQWNPSDRPSFAEIHQAFETMFQESSI 275 (288)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCChhhCcCHHHHHHHHHHHHHhccc
Confidence 999999999999999999999988765443
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-45 Score=351.74 Aligned_cols=249 Identities=18% Similarity=0.229 Sum_probs=197.1
Q ss_pred CcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhcc--CCCCcceeeeeeeeeC----CceEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGN--VRHKRLVNLIGCCAEG----DERLL 135 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~----~~~~l 135 (497)
+.+.+++.||+|+||+||+|.+ +|+.||||++... ....+.+|.+++.. ++||||+++++++... ...++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 8 RDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred CcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 3567888899999999999998 6899999998653 34566777777766 7899999999987553 45899
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHH--------cCCCcccccCCCcceEeCCCCCeeEcccCC
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCN--------SQNRKLYHDLNAYRVLFDEDGDPRLSSFGL 207 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh--------~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 207 (497)
||||+++|+|.+++. ...+++..+..++.||+.||.||| +.+ ++||||||+|||++.++.+||+|||+
T Consensus 84 v~e~~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA-IAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp EECCCTTCBHHHHHT---TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTT
T ss_pred ehhhccCCCHHHHHh---hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-eecCCCChHhEEEcCCCCEEEeeCCC
Confidence 999999999999994 457999999999999999999999 888 99999999999999999999999999
Q ss_pred ccccCCC--------CccccCCCCCCccccccC------CCCcccceeehhhhHHHHhhC----------CCCCCchhhH
Q 010932 208 MKNSRDG--------KSYSTNLAYTPPEFLRTG------RVIPESVIYSYGTVLLDLLSG----------KHIPPSHALD 263 (497)
Q Consensus 208 a~~~~~~--------~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~~l~elltg----------~~~~~~~~~~ 263 (497)
++..... ....||+.|+|||++.+. .++.++|||||||++|||+|| ..||......
T Consensus 160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~ 239 (301)
T 3q4u_A 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239 (301)
T ss_dssp CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence 8754332 234789999999999876 566799999999999999999 6665432110
Q ss_pred HHhcccccc-ccccccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhh
Q 010932 264 VIRGKNLLL-LMDSSLEGQY-----ANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 264 ~~~~~~~~~-~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
......... .......... +...+..+.+|+.+||+.||++|||+.+|++.|+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 240 DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 000000000 0001111112 234778899999999999999999999999999875
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=358.52 Aligned_cols=239 Identities=23% Similarity=0.242 Sum_probs=194.5
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCC---CChhHHHHHHHH-hccCCCCcceeeeeeeeeCCceEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSW---PDPHQFVTEAAG-LGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~---~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
+++.+++.||+|+||+||+++++. ++.||||++..... .....+.+|..+ ++.++||||+++++++.+.+..++|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 457888999999999999999864 89999999975432 223457777777 5778999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC----
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR---- 212 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~---- 212 (497)
|||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++...
T Consensus 118 ~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~ 194 (373)
T 2r5t_A 118 LDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS 194 (373)
T ss_dssp EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCC
T ss_pred EeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEeeCccccccccCCC
Confidence 999999999999975 467999999999999999999999999 9999999999999999999999999998532
Q ss_pred CCCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 213 DGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 213 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
.....+||+.|+|||++.+..++.++|||||||++|||++|..||.......+... +... ...++...+..+.+
T Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~----i~~~--~~~~~~~~~~~~~~ 268 (373)
T 2r5t_A 195 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDN----ILNK--PLQLKPNITNSARH 268 (373)
T ss_dssp CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHH----HHHS--CCCCCSSSCHHHHH
T ss_pred ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHH----HHhc--ccCCCCCCCHHHHH
Confidence 22456899999999999999999999999999999999999999876543332221 1111 11234456778999
Q ss_pred HHHHhcccCCCCCCCHH
Q 010932 293 LASKCLQYEAKDRPDVK 309 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~ 309 (497)
||.+||+.||.+||++.
T Consensus 269 li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 269 LLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp HHHHHTCSSGGGSTTTT
T ss_pred HHHHHcccCHHhCCCCC
Confidence 99999999999999975
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=354.78 Aligned_cols=256 Identities=21% Similarity=0.277 Sum_probs=206.3
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-----CcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-----NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
+.+.+.+.||+|+||+||+|.+.. +..||||+++..... ....+.+|+.+++.++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 345667789999999999998653 246999999754322 24568999999999999999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK 215 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 215 (497)
||||+++++|.+++.. ....+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++......
T Consensus 124 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 201 (333)
T 1mqb_A 124 ITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 201 (333)
T ss_dssp EEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred EEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChheEEECCCCcEEECCCCcchhhcccc
Confidence 9999999999999965 2467999999999999999999999999 9999999999999999999999999998654321
Q ss_pred -------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHH
Q 010932 216 -------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287 (497)
Q Consensus 216 -------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (497)
...+|+.|+|||++.+..++.++|||||||++|+|++ |+.||......... ..+........+..++
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~-----~~~~~~~~~~~~~~~~ 276 (333)
T 1mqb_A 202 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM-----KAINDGFRLPTPMDCP 276 (333)
T ss_dssp ---------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH-----HHHHTTCCCCCCTTCB
T ss_pred ccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHH-----HHHHCCCcCCCcccCC
Confidence 2234678999999998999999999999999999999 88887544322211 1111112223345567
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhccccc
Q 010932 288 TQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEV 324 (497)
Q Consensus 288 ~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~~ 324 (497)
..+.+|+.+||+.||++|||+.++++.|+.+......
T Consensus 277 ~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 313 (333)
T 1mqb_A 277 SAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS 313 (333)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence 8899999999999999999999999999998765544
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=354.75 Aligned_cols=255 Identities=14% Similarity=0.141 Sum_probs=206.9
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEEEc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
..+.+++.||+|+||+||+|... +|+.||||++.... ..+.+.+|+.+++.+ +||||+++++++......++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 45678889999999999999974 59999999987543 235699999999999 899999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCC-----eeEcccCCccccCCC
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGD-----PRLSSFGLMKNSRDG 214 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~-----~kl~Dfgla~~~~~~ 214 (497)
+ +++|.+++... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++. +||+|||+++.....
T Consensus 87 ~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~-iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~ 163 (330)
T 2izr_A 87 L-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKN-LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP 163 (330)
T ss_dssp C-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred C-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence 9 99999999753 568999999999999999999999999 999999999999998887 999999999854321
Q ss_pred -----------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCC--
Q 010932 215 -----------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQ-- 281 (497)
Q Consensus 215 -----------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 281 (497)
....||+.|+|||++.+..++.++|||||||++|||++|+.||........... ...+........
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~-~~~i~~~~~~~~~~ 242 (330)
T 2izr_A 164 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKER-YQKIGDTKRATPIE 242 (330)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHH-HHHHHHHHHHSCHH
T ss_pred CCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHH-HHHHHhhhccCCHH
Confidence 345789999999999999999999999999999999999998865321110000 000000000000
Q ss_pred -CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcccc
Q 010932 282 -YANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323 (497)
Q Consensus 282 -~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~ 323 (497)
.....+ .+.+|+.+||+.||.+||++.+|++.|+.+.....
T Consensus 243 ~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~ 284 (330)
T 2izr_A 243 VLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKG 284 (330)
T ss_dssp HHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 011134 89999999999999999999999999988875543
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=354.36 Aligned_cols=244 Identities=20% Similarity=0.268 Sum_probs=199.0
Q ss_pred CcccccccCCCCCCcEEEEEEE----cCCcEEEEEEccCCCC----CChhHHHHHHHHhccCCCCcceeeeeeeeeCCce
Q 010932 62 SSELIVSESGDKAPNVVYRGRL----KNNRLVAIKRFSRQSW----PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 133 (497)
+.+.+++.||+|+||+||++.. .+|+.||||+++.... .....+.+|+.+|+.++||||+++++++...+..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 4678888999999999999997 3689999999976432 2345688999999999999999999999999999
Q ss_pred EEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC
Q 010932 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD 213 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 213 (497)
++||||+++++|.+++.. .+.+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++....
T Consensus 97 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 173 (327)
T 3a62_A 97 YLILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIH 173 (327)
T ss_dssp EEEEECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred EEEEeCCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCC-EEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence 999999999999999965 457899999999999999999999999 99999999999999999999999999875332
Q ss_pred C----CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHH
Q 010932 214 G----KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQ 289 (497)
Q Consensus 214 ~----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (497)
. ....||+.|+|||++.+..++.++|||||||++|+|++|+.||........... +... ...++...+..
T Consensus 174 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~----i~~~--~~~~p~~~~~~ 247 (327)
T 3a62_A 174 DGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDK----ILKC--KLNLPPYLTQE 247 (327)
T ss_dssp -----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH----HHHT--CCCCCTTSCHH
T ss_pred CCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHH----HHhC--CCCCCCCCCHH
Confidence 2 345789999999999988999999999999999999999998865433322111 1111 12344556788
Q ss_pred HHHHHHHhcccCCCCCC-----CHHHHHHH
Q 010932 290 LVELASKCLQYEAKDRP-----DVKFLLSA 314 (497)
Q Consensus 290 l~~li~~cl~~dp~~Rp-----s~~~ll~~ 314 (497)
+.+|+.+||+.||.+|| ++.+++++
T Consensus 248 ~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 248 ARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp HHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred HHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 99999999999999999 78899886
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-45 Score=371.46 Aligned_cols=245 Identities=22% Similarity=0.239 Sum_probs=200.1
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCC---CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQ---SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
.+.+.+++.||+|+||.||++... +|+.||||++... .......+.+|+.+|+.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 356788899999999999999976 4999999999753 223346788999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCcccccCCCcceEeCCCCCeeEcccCCccccCC--
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNS-QNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD-- 213 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 213 (497)
|||+++++|..++.. ...+++..+..++.||+.||.|||+ ++ |+||||||+|||++.++.+||+|||+++....
T Consensus 227 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~g-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 227 MEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp ECCCSSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHHTC-CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred EeeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCC-EEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 999999999999865 4679999999999999999999998 88 99999999999999999999999999985332
Q ss_pred --CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHH
Q 010932 214 --GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291 (497)
Q Consensus 214 --~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (497)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||............. .. ...++...++.+.
T Consensus 304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~----~~--~~~~p~~~~~~~~ 377 (446)
T 4ejn_A 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL----ME--EIRFPRTLGPEAK 377 (446)
T ss_dssp ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH----HC--CCCCCTTSCHHHH
T ss_pred cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHH----hC--CCCCCccCCHHHH
Confidence 235678999999999999999999999999999999999999986654332221111 11 1234555678899
Q ss_pred HHHHHhcccCCCCCC-----CHHHHHHH
Q 010932 292 ELASKCLQYEAKDRP-----DVKFLLSA 314 (497)
Q Consensus 292 ~li~~cl~~dp~~Rp-----s~~~ll~~ 314 (497)
+||.+||+.||.+|| |+.+++++
T Consensus 378 ~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 378 SLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp HHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 999999999999999 99999986
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=344.30 Aligned_cols=252 Identities=21% Similarity=0.306 Sum_probs=212.9
Q ss_pred CCcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
.+.+.+++.||+|+||.||++.+.+++.||||++..... ..+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 456788889999999999999998889999999986543 4578999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-----C
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-----K 215 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~ 215 (497)
++++|.+++... ...+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++...... .
T Consensus 86 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 163 (267)
T 3t9t_A 86 EHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 163 (267)
T ss_dssp TTCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CCCcHHHHHhhC-cccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEECCCCCEEEcccccccccccccccccc
Confidence 999999999653 457899999999999999999999999 999999999999999999999999998865432 2
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 294 (497)
...+|+.|+|||++.+..++.++||||||+++|+|++ |+.||........... +........+...+..+.+++
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~-----i~~~~~~~~~~~~~~~l~~li 238 (267)
T 3t9t_A 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED-----ISTGFRLYKPRLASTHVYQIM 238 (267)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH-----HHTTCCCCCCTTSCHHHHHHH
T ss_pred cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHH-----HhcCCcCCCCccCcHHHHHHH
Confidence 3456778999999998899999999999999999999 7877754332221111 111112233445677899999
Q ss_pred HHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 295 SKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 295 ~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
.+||+.||++|||+.+++++|+.+..
T Consensus 239 ~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 239 NHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999998864
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=356.09 Aligned_cols=246 Identities=16% Similarity=0.173 Sum_probs=203.3
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCC-----CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQ-----SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
.|.+++.||+|+||+||+|.++ +|+.||||++... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 104 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMV 104 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 4678889999999999999976 5999999998532 222467899999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCC---eeEcccCCcccc
Q 010932 137 AQYMPNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGD---PRLSSFGLMKNS 211 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfgla~~~ 211 (497)
|||++|++|.+.+... ....+++..+..++.||+.||.|||+++ ++||||||+|||++.++. +||+|||+++..
T Consensus 105 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 105 FEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN-IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp EECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred EeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 9999999998887542 2346899999999999999999999999 999999999999986654 999999999865
Q ss_pred CCC----CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCC--CCCHH
Q 010932 212 RDG----KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEG--QYANE 285 (497)
Q Consensus 212 ~~~----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 285 (497)
... ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.......... +....... .....
T Consensus 184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-----i~~~~~~~~~~~~~~ 258 (351)
T 3c0i_A 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEG-----IIKGKYKMNPRQWSH 258 (351)
T ss_dssp CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHH-----HHHTCCCCCHHHHTT
T ss_pred cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHH-----HHcCCCCCCcccccc
Confidence 443 24578999999999999899999999999999999999999987643322111 11110000 00123
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 286 DATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 286 ~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+..+.+|+.+||+.||++|||+.+++++
T Consensus 259 ~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 259 ISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 46789999999999999999999999985
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-45 Score=355.42 Aligned_cols=257 Identities=19% Similarity=0.262 Sum_probs=196.6
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-Cc---EEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeCCce--
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NR---LVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER-- 133 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~---~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~-- 133 (497)
..+.+++.||+|+||+||+|.+.. +. .||||+++.... ...+.+.+|+.++++++||||+++++++......
T Consensus 23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 102 (323)
T 3qup_A 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR 102 (323)
T ss_dssp --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----
T ss_pred hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccC
Confidence 456788889999999999999754 32 899999976532 2356799999999999999999999999876654
Q ss_pred ----EEEEEcCCCCChhhhhhcCC----CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEccc
Q 010932 134 ----LLVAQYMPNDTLSKHLFHWD----KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSF 205 (497)
Q Consensus 134 ----~lv~e~~~~~~L~~~l~~~~----~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Df 205 (497)
++||||+++++|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+||
T Consensus 103 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~Dikp~NIli~~~~~~kl~Df 181 (323)
T 3qup_A 103 LPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN-FIHRDLAARNCMLAEDMTVCVADF 181 (323)
T ss_dssp --CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCC
T ss_pred CCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC-cccCCCCcceEEEcCCCCEEEeec
Confidence 99999999999999986421 226999999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhcccccccccccc
Q 010932 206 GLMKNSRDGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSL 278 (497)
Q Consensus 206 gla~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (497)
|+++...... ...+|+.|+|||.+.+..++.++|||||||++|+|++ |..||......... ..+....
T Consensus 182 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~-----~~~~~~~ 256 (323)
T 3qup_A 182 GLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIY-----NYLIGGN 256 (323)
T ss_dssp CC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH-----HHHHTTC
T ss_pred cccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHH-----HHHhcCC
Confidence 9997643322 2345678999999999999999999999999999999 78777543222111 1111111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhccccc
Q 010932 279 EGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEV 324 (497)
Q Consensus 279 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~~ 324 (497)
....+...+..+.+|+.+||+.||++|||+.++++.|+.+...+..
T Consensus 257 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~ 302 (323)
T 3qup_A 257 RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSV 302 (323)
T ss_dssp CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhh
Confidence 2234455678899999999999999999999999999999876554
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-45 Score=361.40 Aligned_cols=246 Identities=17% Similarity=0.149 Sum_probs=199.0
Q ss_pred cccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 65 LIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
...+.||+|+||.||+|... +|+.||||+++.......+.+.+|+.+|++++||||+++++++...+..++||||++++
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 33556899999999999975 59999999998755445678999999999999999999999999999999999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEe--CCCCCeeEcccCCccccCCC---Cccc
Q 010932 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF--DEDGDPRLSSFGLMKNSRDG---KSYS 218 (497)
Q Consensus 144 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill--~~~~~~kl~Dfgla~~~~~~---~~~~ 218 (497)
+|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+|||+ +.++.+||+|||+++..... ....
T Consensus 172 ~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~ 249 (373)
T 2x4f_A 172 ELFDRIID-ESYNLTELDTILFMKQICEGIRHMHQMY-ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF 249 (373)
T ss_dssp EEHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCC
T ss_pred cHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccccc
Confidence 99998865 2457999999999999999999999999 9999999999999 56788999999999865443 2356
Q ss_pred cCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhc
Q 010932 219 TNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCL 298 (497)
Q Consensus 219 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 298 (497)
||+.|+|||++.+..++.++|||||||++|||++|+.||................. ..........++.+.+||.+||
T Consensus 250 gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~li~~~L 327 (373)
T 2x4f_A 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRW--DLEDEEFQDISEEAKEFISKLL 327 (373)
T ss_dssp SSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC--CSCSGGGTTSCHHHHHHHHTTS
T ss_pred CCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC--CCChhhhccCCHHHHHHHHHHc
Confidence 89999999999988999999999999999999999998876533222111111000 0011112345678999999999
Q ss_pred ccCCCCCCCHHHHHHH
Q 010932 299 QYEAKDRPDVKFLLSA 314 (497)
Q Consensus 299 ~~dp~~Rps~~~ll~~ 314 (497)
+.||.+|||+.+++++
T Consensus 328 ~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 328 IKEKSWRISASEALKH 343 (373)
T ss_dssp CSSGGGSCCHHHHHHS
T ss_pred CCChhhCCCHHHHhcC
Confidence 9999999999999985
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=357.67 Aligned_cols=246 Identities=21% Similarity=0.214 Sum_probs=190.6
Q ss_pred cccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
.+.+.+.||+|+||+||+|.+.. ++.||||++.... ..+.+.+|+.+|++++||||+++++++......++||||++
T Consensus 54 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 131 (349)
T 2w4o_A 54 FFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVT 131 (349)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred cEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCC
Confidence 35777889999999999999864 8899999997543 34678899999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC---CCCeeEcccCCccccCCC---C
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE---DGDPRLSSFGLMKNSRDG---K 215 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~~~---~ 215 (497)
+++|.+++.. .+.+++..+..++.||+.||.|||+.+ ++||||||+|||++. ++.+||+|||+++..... .
T Consensus 132 ~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 208 (349)
T 2w4o_A 132 GGELFDRIVE--KGYYSERDAADAVKQILEAVAYLHENG-IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208 (349)
T ss_dssp SCBHHHHHTT--CSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCcccEEEecCCCCCCEEEccCccccccCcccccc
Confidence 9999999865 567999999999999999999999999 999999999999975 899999999999865433 3
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
...||+.|+|||++.+..++.++|||||||++|+|++|..||............+.. .............+..+.+|+.
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~li~ 287 (349)
T 2w4o_A 209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILN-CEYYFISPWWDEVSLNAKDLVR 287 (349)
T ss_dssp ----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHT-TCCCCCTTTTTTSCHHHHHHHH
T ss_pred cccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHh-CCCccCCchhhhCCHHHHHHHH
Confidence 457899999999999989999999999999999999999988654322211111100 0001111223456778999999
Q ss_pred HhcccCCCCCCCHHHHHHH
Q 010932 296 KCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~ 314 (497)
+||+.||++|||+.+++++
T Consensus 288 ~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 288 KLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp TTSCSSGGGSCCHHHHHHS
T ss_pred HHccCChhhCcCHHHHhcC
Confidence 9999999999999999985
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=347.20 Aligned_cols=252 Identities=19% Similarity=0.245 Sum_probs=199.0
Q ss_pred CcccccccCCCCCCcEEEEEEEcC----CcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN----NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
..+.+.+.||+|+||.||+|.+.. +..||||++...... ..+.+.+|+.+++.++||||+++++++. .+..++|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv 93 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 93 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEE
Confidence 466788889999999999999743 557999998764322 2457899999999999999999999984 4678999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK- 215 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 215 (497)
|||+++++|.+++... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++......
T Consensus 94 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 171 (281)
T 1mp8_A 94 MELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 171 (281)
T ss_dssp EECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC------------
T ss_pred EecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHEEECCCCCEEECccccccccCcccc
Confidence 9999999999999653 457999999999999999999999999 9999999999999999999999999998654332
Q ss_pred ----ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHH
Q 010932 216 ----SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290 (497)
Q Consensus 216 ----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (497)
...+|+.|+|||++.+..++.++|||||||++|+|++ |..||........ ...+........+..+++.+
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~-----~~~i~~~~~~~~~~~~~~~l 246 (281)
T 1mp8_A 172 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-----IGRIENGERLPMPPNCPPTL 246 (281)
T ss_dssp -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-----HHHHHTTCCCCCCTTCCHHH
T ss_pred cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH-----HHHHHcCCCCCCCCCCCHHH
Confidence 2345678999999998999999999999999999997 8877754322211 11111112223455677889
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 291 VELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 291 ~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
.+++.+||+.||++|||+.++++.|+.+...
T Consensus 247 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 247 YSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988643
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-45 Score=358.54 Aligned_cols=255 Identities=19% Similarity=0.277 Sum_probs=208.0
Q ss_pred CcccccccCCCCCCcEEEEEEEc------CCcEEEEEEccCCC-CCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCce
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK------NNRLVAIKRFSRQS-WPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDER 133 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 133 (497)
..+.+++.||+|+||+||+|.+. ++..||||++.... ....+.+.+|+.+|+++ +||||+++++++...+..
T Consensus 45 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 124 (344)
T 1rjb_A 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI 124 (344)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCcc
Confidence 46678888999999999999962 36689999997543 23457899999999999 899999999999999999
Q ss_pred EEEEEcCCCCChhhhhhcCCC---------------------CCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcce
Q 010932 134 LLVAQYMPNDTLSKHLFHWDK---------------------QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRV 192 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~---------------------~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Ni 192 (497)
++||||+++|+|.+++..... ..+++..+..++.||+.||.|||+++ ++||||||+||
T Consensus 125 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NI 203 (344)
T 1rjb_A 125 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNV 203 (344)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGE
T ss_pred EEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhE
Confidence 999999999999999975322 24899999999999999999999999 99999999999
Q ss_pred EeCCCCCeeEcccCCccccCCCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHH
Q 010932 193 LFDEDGDPRLSSFGLMKNSRDGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVI 265 (497)
Q Consensus 193 ll~~~~~~kl~Dfgla~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~ 265 (497)
|++.++.+||+|||++....... ...+|+.|+|||++.+..++.++|||||||++|+|+| |..||........
T Consensus 204 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~ 283 (344)
T 1rjb_A 204 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN 283 (344)
T ss_dssp EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred EEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHH
Confidence 99999999999999997543322 3346788999999999999999999999999999998 8888755321111
Q ss_pred hccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
....+........+...++.+.+|+.+||+.||.+|||+.+++++|+.+...
T Consensus 284 ----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 284 ----FYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp ----HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred ----HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 1111222223344555678899999999999999999999999999988654
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-45 Score=364.32 Aligned_cols=249 Identities=15% Similarity=0.106 Sum_probs=194.0
Q ss_pred Cccccc-ccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhc-cCCCCcceeeeeeeee----CCceE
Q 010932 62 SSELIV-SESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLG-NVRHKRLVNLIGCCAE----GDERL 134 (497)
Q Consensus 62 ~~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~-~l~h~niv~~~~~~~~----~~~~~ 134 (497)
+.+.++ +.||.|+||+||++.++ +|+.||||++.. ...+.+|+.++. ..+||||+++++++.. ....+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 344555 57899999999999986 489999999963 356888999874 4589999999999875 56789
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC---CCCeeEcccCCcccc
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE---DGDPRLSSFGLMKNS 211 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~ 211 (497)
|||||++||+|.+++.......+++..+..|+.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++..
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~ 214 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 214 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCcceEEEecCCCCccEEEEeccccccc
Confidence 9999999999999997654567999999999999999999999999 999999999999997 789999999999865
Q ss_pred CCC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccc--cCCCCCHHH
Q 010932 212 RDG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSS--LEGQYANED 286 (497)
Q Consensus 212 ~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 286 (497)
... ....||+.|+|||++.+..++.++|||||||++|+|++|+.||...............+.... ........+
T Consensus 215 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 294 (400)
T 1nxk_A 215 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 294 (400)
T ss_dssp C-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTS
T ss_pred CCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccC
Confidence 433 346789999999999999999999999999999999999998865321111000000011010 111112346
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 010932 287 ATQLVELASKCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 287 ~~~l~~li~~cl~~dp~~Rps~~~ll~~l~ 316 (497)
+..+.+||.+||+.||++|||+.+++++-.
T Consensus 295 s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 324 (400)
T 1nxk_A 295 SEEVKMLIRNLLKTEPTQRMTITEFMNHPW 324 (400)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred CHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 778999999999999999999999998743
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=357.20 Aligned_cols=247 Identities=22% Similarity=0.221 Sum_probs=205.2
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC---hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
+.+++.||+|+||+||+|... +|+.||||++....... .+.+.+|+.+|++++||||+++++++...+..++||||
T Consensus 56 y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 135 (348)
T 1u5q_A 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 135 (348)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEec
Confidence 567788899999999999974 69999999997654322 35689999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCcccc
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYST 219 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~g 219 (497)
+. |+|.+++... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.........|
T Consensus 136 ~~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~g 212 (348)
T 1u5q_A 136 CL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG 212 (348)
T ss_dssp CS-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred CC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccC
Confidence 97 6787777542 567999999999999999999999999 99999999999999999999999999988777777889
Q ss_pred CCCCCCccccc---cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 220 NLAYTPPEFLR---TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 220 t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
|+.|+|||++. +..++.++|||||||++|||++|+.||.......... .+.........+...+..+.+|+.+
T Consensus 213 t~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~ 288 (348)
T 1u5q_A 213 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY----HIAQNESPALQSGHWSEYFRNFVDS 288 (348)
T ss_dssp CGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH----HHHHSCCCCCCCTTSCHHHHHHHHH
T ss_pred CcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH----HHHhcCCCCCCCCCCCHHHHHHHHH
Confidence 99999999985 5678999999999999999999999876543221111 1111111111233456779999999
Q ss_pred hcccCCCCCCCHHHHHHHhhh
Q 010932 297 CLQYEAKDRPDVKFLLSAVAP 317 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~l~~ 317 (497)
||+.||++|||+.+++++..-
T Consensus 289 ~l~~dP~~Rps~~~ll~h~~~ 309 (348)
T 1u5q_A 289 CLQKIPQDRPTSEVLLKHRFV 309 (348)
T ss_dssp HTCSSGGGSCCHHHHTTCHHH
T ss_pred HcccChhhCcCHHHHhhChhh
Confidence 999999999999999986443
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-44 Score=350.68 Aligned_cols=251 Identities=20% Similarity=0.267 Sum_probs=190.4
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
+.+.+++.||+|+||+||+|..+ +|+.||||+++.... ...+.+.+|+.+|+.++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 84 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF 84 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence 45678889999999999999975 499999999975433 2356799999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCC----CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-
Q 010932 140 MPNDTLSKHLFHWD----KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG- 214 (497)
Q Consensus 140 ~~~~~L~~~l~~~~----~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 214 (497)
++ ++|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 162 (317)
T 2pmi_A 85 MD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK-ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV 162 (317)
T ss_dssp CC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCSSCEETTSCC
T ss_pred cC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCChHHeEEcCCCCEEECcCccceecCCCc
Confidence 97 58998886421 246999999999999999999999999 999999999999999999999999999865422
Q ss_pred ---CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc-----------cc-----c
Q 010932 215 ---KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL-----------LL-----M 274 (497)
Q Consensus 215 ---~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~-----------~~-----~ 274 (497)
....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.............. .. .
T Consensus 163 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T 2pmi_A 163 NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKY 242 (317)
T ss_dssp CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTC
T ss_pred ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhc
Confidence 34578999999999976 4689999999999999999999998875432221110000 00 0
Q ss_pred cccc------------CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 275 DSSL------------EGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 275 ~~~~------------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.... ....+...+..+.+|+.+||+.||++|||+.+++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 243 NPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0000 001112345689999999999999999999999985
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-44 Score=367.09 Aligned_cols=244 Identities=21% Similarity=0.262 Sum_probs=207.5
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCC---CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQ---SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
..|.+.+.||+|+||+||+|.+. +|+.||||++... .....+.+.+|+.+|+.++||||+++++++.+....++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56788889999999999999986 5999999999643 2233567999999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 214 (497)
||+++++|.+++.. .+.+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 96 E~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~ 172 (476)
T 2y94_A 96 EYVSGGELFDYICK--NGRLDEKESRRLFQQILSGVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL 172 (476)
T ss_dssp ECCSSEEHHHHTTS--SSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCB
T ss_pred eCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcccccHHHEEEecCCCeEEEeccchhhccccccc
Confidence 99999999999965 567999999999999999999999999 999999999999999999999999999865443
Q ss_pred CccccCCCCCCccccccCCC-CcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHH
Q 010932 215 KSYSTNLAYTPPEFLRTGRV-IPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVEL 293 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 293 (497)
....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||........... +.+.. ...+...++.+.+|
T Consensus 173 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~----i~~~~--~~~p~~~s~~~~~L 246 (476)
T 2y94_A 173 RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKK----ICDGI--FYTPQYLNPSVISL 246 (476)
T ss_dssp CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHH----HHTTC--CCCCTTCCHHHHHH
T ss_pred cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHH----HhcCC--cCCCccCCHHHHHH
Confidence 35678999999999998765 6899999999999999999998865433222111 11111 12344566789999
Q ss_pred HHHhcccCCCCCCCHHHHHHH
Q 010932 294 ASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 294 i~~cl~~dp~~Rps~~~ll~~ 314 (497)
+.+||+.||.+|||+.+++++
T Consensus 247 i~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 247 LKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp HHHHTCSSTTTSCCHHHHHTC
T ss_pred HHHHcCCCchhCcCHHHHHhC
Confidence 999999999999999999985
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-45 Score=366.66 Aligned_cols=253 Identities=20% Similarity=0.193 Sum_probs=207.2
Q ss_pred cCCCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCC---CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceE
Q 010932 59 NGFSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQ---SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 59 ~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 134 (497)
...+++.+++.||+|+||+||+|.+++ ++.||||++... .......+.+|+.++..++||||+++++++.+.+..+
T Consensus 71 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~ 150 (437)
T 4aw2_A 71 LHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLY 150 (437)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEE
T ss_pred CChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEE
Confidence 344567788899999999999999875 899999998642 1223345899999999999999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
+||||++||+|.+++... ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.....
T Consensus 151 lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~ 228 (437)
T 4aw2_A 151 LVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 228 (437)
T ss_dssp EEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeeEcCCCCEEEcchhhhhhcccC
Confidence 999999999999999652 467999999999999999999999999 999999999999999999999999999765433
Q ss_pred -----CccccCCCCCCccccc-----cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCH
Q 010932 215 -----KSYSTNLAYTPPEFLR-----TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYAN 284 (497)
Q Consensus 215 -----~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (497)
....||+.|+|||++. ...++.++|||||||++|||++|+.||................... ..+....
T Consensus 229 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~-~~p~~~~ 307 (437)
T 4aw2_A 229 GTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF-QFPTQVT 307 (437)
T ss_dssp SCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC-CCCSSCC
T ss_pred CCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccc-cCCcccc
Confidence 2357899999999997 4678999999999999999999999987654332221111100000 0111123
Q ss_pred HHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 010932 285 EDATQLVELASKCLQYEAKD--RPDVKFLLSA 314 (497)
Q Consensus 285 ~~~~~l~~li~~cl~~dp~~--Rps~~~ll~~ 314 (497)
..++.+.+||.+||..+|++ ||++++++++
T Consensus 308 ~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 308 DVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp CSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred cCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 36778999999999998888 9999999986
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-44 Score=348.58 Aligned_cols=251 Identities=22% Similarity=0.222 Sum_probs=200.7
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC-----CChhHHHHHHHHhccCC---CCcceeeeeeeeeCC-
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW-----PDPHQFVTEAAGLGNVR---HKRLVNLIGCCAEGD- 131 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~- 131 (497)
+.|.+++.||+|+||+||+|.+. +|+.||||++..... .....+.+|+.+++.++ ||||+++++++....
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~ 88 (308)
T 3g33_A 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT 88 (308)
T ss_dssp -CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCS
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCC
Confidence 45688889999999999999974 599999999864321 12356788888887775 999999999998765
Q ss_pred ----ceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCC
Q 010932 132 ----ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGL 207 (497)
Q Consensus 132 ----~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 207 (497)
..++||||+. ++|.+++.......+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 89 DREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp SSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred CCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 4799999996 69999998755566999999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccc-------c---
Q 010932 208 MKNSRDG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLL-------M--- 274 (497)
Q Consensus 208 a~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~-------~--- 274 (497)
++..... ....||+.|+|||++.+..++.++|||||||++|+|++|+.||................ .
T Consensus 167 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 246 (308)
T 3g33_A 167 ARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD 246 (308)
T ss_dssp TTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSS
T ss_pred ccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccch
Confidence 9865433 34578999999999999999999999999999999999999886543222111100000 0
Q ss_pred ----ccccCC-------CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 275 ----DSSLEG-------QYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 275 ----~~~~~~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
...... ...+..++.+.+|+.+||+.||++|||+.+++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 247 VSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 000000 0112356789999999999999999999999986
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=346.25 Aligned_cols=253 Identities=22% Similarity=0.343 Sum_probs=204.3
Q ss_pred CCCcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeC-CceEEEEE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG-DERLLVAQ 138 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e 138 (497)
+++.+.+++.||+|+||+||++.+. |+.||||+++... ..+.+.+|+.+++.++||||+++++++... +..++|||
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred ChhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 3467788899999999999999884 8899999997543 457899999999999999999999987554 57899999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-Ccc
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-KSY 217 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~ 217 (497)
|+++++|.+++.......+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++...... ...
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 174 (278)
T 1byg_A 96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 174 (278)
T ss_dssp CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCCcceEEEeCCCcEEEeeccccccccccccCC
Confidence 999999999997543334899999999999999999999999 999999999999999999999999998755433 334
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
.+++.|+|||++.+..++.++||||||+++|+|+| |+.|+......... ..+........+...++.+.+++.+
T Consensus 175 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~ 249 (278)
T 1byg_A 175 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV-----PRVEKGYKMDAPDGCPPAVYEVMKN 249 (278)
T ss_dssp -CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHH-----HHHTTTCCCCCCTTCCHHHHHHHHH
T ss_pred CccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHhcCCCCCCcccCCHHHHHHHHH
Confidence 57889999999998999999999999999999998 88877543222111 1111222234455677889999999
Q ss_pred hcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 297 CLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
||+.||++|||+.++++.|+.+...
T Consensus 250 ~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 250 CWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhcCChhhCCCHHHHHHHHHHHHhh
Confidence 9999999999999999999988653
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=345.25 Aligned_cols=252 Identities=21% Similarity=0.337 Sum_probs=210.6
Q ss_pred CcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
+.+.+++.||+|+||.||+|...++..||||++.... ...+.+.+|+++++.++||||+++++++.. +..++||||++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 90 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYME 90 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCC
Confidence 4677888999999999999999888899999997543 346789999999999999999999999864 56899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-----Cc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-----KS 216 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 216 (497)
+++|.+++.......+++..+..++.||+.||.|||+++ ++|+||||+|||++.++.+||+|||++...... ..
T Consensus 91 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 169 (279)
T 1qpc_A 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169 (279)
T ss_dssp TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTT
T ss_pred CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccC
Confidence 999999996533347999999999999999999999999 999999999999999999999999999865433 22
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
..+|+.|+|||++.+..++.++|||||||++|+|++ |+.||.......... .+........+...+..+.+|+.
T Consensus 170 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~ 244 (279)
T 1qpc_A 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ-----NLERGYRMVRPDNCPEELYQLMR 244 (279)
T ss_dssp CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH-----HHHTTCCCCCCTTCCHHHHHHHH
T ss_pred CCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHH-----HHhcccCCCCcccccHHHHHHHH
Confidence 345778999999998899999999999999999999 787775543222111 11111222334556778999999
Q ss_pred HhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 296 KCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
+||+.||++|||+.++++.|+.+...
T Consensus 245 ~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 245 LCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHhccChhhCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999988654
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=352.75 Aligned_cols=253 Identities=18% Similarity=0.242 Sum_probs=205.1
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcE----EEEEEccCC-CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRL----VAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~----vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
..+.+++.||+|+||+||+|.+.. ++. ||+|.+... .....+.+.+|+.+++.++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 467888999999999999999753 554 577777543 3334678999999999999999999999998754 789
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK 215 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 215 (497)
|++|+++++|.+++... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++......
T Consensus 94 v~~~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~ 171 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EECCCSSCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred EEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhCC-CcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence 99999999999999763 567999999999999999999999999 9999999999999999999999999998653321
Q ss_pred ------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHH
Q 010932 216 ------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288 (497)
Q Consensus 216 ------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (497)
...+|+.|+|||++.+..++.++|||||||++|+|++ |..||....... +...+........+..++.
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 246 (327)
T 3lzb_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----ISSILEKGERLPQPPICTI 246 (327)
T ss_dssp --------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-----HHHHHHTTCCCCCCTTBCH
T ss_pred ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-----HHHHHHcCCCCCCCccCCH
Confidence 2345778999999999999999999999999999999 888875542222 1222222233344556778
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHhhhhhccc
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQT 322 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~ 322 (497)
.+.+|+.+||+.||.+|||+.++++.|+.+...+
T Consensus 247 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 247 DVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 8999999999999999999999999999987654
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=355.37 Aligned_cols=247 Identities=19% Similarity=0.262 Sum_probs=202.1
Q ss_pred CcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCC--CcceeeeeeeeeCCceEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRH--KRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv~ 137 (497)
..|.+++.||+|+||+||++...+++.||||++....... .+.+.+|+.+|+.++| |||+++++++......++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 4578889999999999999999889999999997554322 3578999999999976 99999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 214 (497)
|+ .+++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 89 e~-~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 89 EC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp CC-CSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred eC-CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 95 58899999976 568999999999999999999999999 99999999999997 678999999999865432
Q ss_pred ---CccccCCCCCCcccccc-----------CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCC
Q 010932 215 ---KSYSTNLAYTPPEFLRT-----------GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEG 280 (497)
Q Consensus 215 ---~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (497)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... ......++.....
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~~~~~~~~~~ 240 (343)
T 3dbq_A 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHEI 240 (343)
T ss_dssp ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH---HHHHHHHCTTSCC
T ss_pred ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH---HHHHHHhcCCccc
Confidence 24568999999999865 678999999999999999999999885432111 1112223333333
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 010932 281 QYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 281 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~ 316 (497)
.++...+..+.+|+.+||+.||.+|||+.+++++-.
T Consensus 241 ~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~ 276 (343)
T 3dbq_A 241 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 276 (343)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcc
Confidence 445555678999999999999999999999998743
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-44 Score=345.63 Aligned_cols=253 Identities=18% Similarity=0.298 Sum_probs=195.3
Q ss_pred CcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
..+.+.+.||+|+||+||+|.+. ..||||+++...... .+.+.+|+.+|+.++||||+++++++ .....++||||
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~ 100 (289)
T 3og7_A 24 GQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQW 100 (289)
T ss_dssp TSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEEC
T ss_pred cceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEe
Confidence 35678888999999999999874 359999997654322 45799999999999999999999965 45678999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC------
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD------ 213 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------ 213 (497)
+++++|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++....
T Consensus 101 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (289)
T 3og7_A 101 CEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ 178 (289)
T ss_dssp CCEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECCCC-------------
T ss_pred cCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCCCEEEccceecccccccccccc
Confidence 999999999864 3567999999999999999999999999 99999999999999999999999999875432
Q ss_pred CCccccCCCCCCccccc---cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc-cccccccCCCCCHHHHHH
Q 010932 214 GKSYSTNLAYTPPEFLR---TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL-LLMDSSLEGQYANEDATQ 289 (497)
Q Consensus 214 ~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 289 (497)
.....||+.|+|||++. +..++.++|||||||++|+|++|+.||.............. ..... ........++..
T Consensus 179 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 257 (289)
T 3og7_A 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSP-DLSKVRSNCPKR 257 (289)
T ss_dssp -----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCC-CTTSSCTTSCHH
T ss_pred ccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCc-chhhccccCCHH
Confidence 12356899999999987 56788899999999999999999998865322111110000 00111 111233456788
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 290 LVELASKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 290 l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
+.+|+.+||+.||.+|||+.++++.|+.+.+
T Consensus 258 l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 258 MKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 9999999999999999999999999988754
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=348.65 Aligned_cols=255 Identities=20% Similarity=0.287 Sum_probs=207.1
Q ss_pred cccccccCCCCCCcEEEEEEE-----cCCcEEEEEEccCCC-CCChhHHHHHHHHhccCCCCcceeeeeeeeeC--CceE
Q 010932 63 SELIVSESGDKAPNVVYRGRL-----KNNRLVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG--DERL 134 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~ 134 (497)
.+.+++.||+|+||.||+|.+ .+|+.||||++.... ....+.+.+|+.+|+.++||||+++++++... ...+
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 101 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 101 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEE
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEE
Confidence 367888899999999999984 358999999997543 23457899999999999999999999999876 6689
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
+||||+++++|.+++... ...+++..+..++.||+.||.|||+++ ++|+||||+|||++.++.+||+|||++......
T Consensus 102 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 179 (302)
T 4e5w_A 102 LIMEFLPSGSLKEYLPKN-KNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 179 (302)
T ss_dssp EEEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EEEEeCCCCcHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHhhcCC-cccCCCchheEEEcCCCCEEECcccccccccCC
Confidence 999999999999999542 467999999999999999999999999 999999999999999999999999999865433
Q ss_pred C-------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHH----------hccccccccccc
Q 010932 215 K-------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVI----------RGKNLLLLMDSS 277 (497)
Q Consensus 215 ~-------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~----------~~~~~~~~~~~~ 277 (497)
. ...+|+.|+|||++.+..++.++|||||||++|+|+||..|+........ ........+...
T Consensus 180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (302)
T 4e5w_A 180 KEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEG 259 (302)
T ss_dssp CCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTT
T ss_pred CcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhcc
Confidence 2 34567789999999999999999999999999999999976432211100 001111112222
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 278 LEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 278 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
.....+..+++.+.+|+.+||+.||.+|||+.++++.|+.+.
T Consensus 260 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 260 KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 233455667788999999999999999999999999998764
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=352.06 Aligned_cols=255 Identities=19% Similarity=0.306 Sum_probs=210.8
Q ss_pred CcccccccCCCCCCcEEEEEEE------cCCcEEEEEEccCCCCC-ChhHHHHHHHHhccC-CCCcceeeeeeeeeCCce
Q 010932 62 SSELIVSESGDKAPNVVYRGRL------KNNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDER 133 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 133 (497)
+.+.+.+.||+|+||.||+|.+ .+++.||||++...... ..+.+.+|+.+++++ +||||+++++++...+..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 102 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCc
Confidence 4567888899999999999985 23789999999765432 246799999999999 899999999999999999
Q ss_pred EEEEEcCCCCChhhhhhcCCC----------------CCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC
Q 010932 134 LLVAQYMPNDTLSKHLFHWDK----------------QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~----------------~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~ 197 (497)
++||||+++++|.+++..... ..+++..+..++.||+.||.|||+++ ++||||||+|||++.+
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~ 181 (313)
T 1t46_A 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHG 181 (313)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETT
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEcCC
Confidence 999999999999999976432 25899999999999999999999999 9999999999999999
Q ss_pred CCeeEcccCCccccCCCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhcccc
Q 010932 198 GDPRLSSFGLMKNSRDGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNL 270 (497)
Q Consensus 198 ~~~kl~Dfgla~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~ 270 (497)
+.+||+|||+++...... ...+|+.|+|||++.+..++.++|||||||++|+|+| |+.||........ .
T Consensus 182 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~----~ 257 (313)
T 1t46_A 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK----F 257 (313)
T ss_dssp TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH----H
T ss_pred CCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH----H
Confidence 999999999998654432 2345778999999999999999999999999999999 8877754321111 1
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 271 LLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
...+........+...+..+.+|+.+||+.||.+|||+.+++++|+.+...
T Consensus 258 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 258 YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp HHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 111112222233455677899999999999999999999999999987643
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=351.07 Aligned_cols=240 Identities=21% Similarity=0.254 Sum_probs=195.0
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 138 (497)
.+.++++||+|+||+||+|.+. +|+.||||++....... ...+..|+..+..+ +||||+++++++.++...++|||
T Consensus 58 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e 137 (311)
T 3p1a_A 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTE 137 (311)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred heeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEe
Confidence 4678888999999999999986 59999999986543322 23455666666555 89999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---C
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---K 215 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~ 215 (497)
|+ +++|.+++... +..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...... .
T Consensus 138 ~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 214 (311)
T 3p1a_A 138 LC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGE 214 (311)
T ss_dssp CC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECGGGCEEECCCTTCEECC------
T ss_pred cc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEccceeeeecccCCCCc
Confidence 99 77898888653 457999999999999999999999999 999999999999999999999999998765433 3
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhh-HHHhccccccccccccCCCCCHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHAL-DVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 294 (497)
...||+.|+|||++.+ .++.++|||||||++|||++|..+|..... ..+.. .......+...+..+.+|+
T Consensus 215 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~li 285 (311)
T 3p1a_A 215 VQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQ--------GYLPPEFTAGLSSELRSVL 285 (311)
T ss_dssp CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTT--------TCCCHHHHTTSCHHHHHHH
T ss_pred ccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhc--------cCCCcccccCCCHHHHHHH
Confidence 4568999999999875 799999999999999999999876654321 11111 1111112233567899999
Q ss_pred HHhcccCCCCCCCHHHHHHH
Q 010932 295 SKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 295 ~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+||+.||++|||+.+++++
T Consensus 286 ~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 286 VMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp HHHSCSSTTTSCCHHHHHTS
T ss_pred HHHcCCChhhCcCHHHHHhC
Confidence 99999999999999999985
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-44 Score=350.69 Aligned_cols=255 Identities=20% Similarity=0.298 Sum_probs=210.8
Q ss_pred ccccccCCCCCCcEEEEEEEc-----CCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeC--CceEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-----NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG--DERLL 135 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 135 (497)
+.+++.||+|+||+||++.++ +|+.||||++..... ...+.+.+|+.+|+.++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 378889999999999998652 588999999976532 1245789999999999999999999999884 57899
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK 215 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 215 (497)
||||+++++|.+++.. ..+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||++.......
T Consensus 113 v~e~~~~~~L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 188 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188 (318)
T ss_dssp EECCCTTCBHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECCTTC
T ss_pred EEecccCCcHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEEcCCCCEEECCccccccccccc
Confidence 9999999999999964 45999999999999999999999999 9999999999999999999999999998654432
Q ss_pred -------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHH----------hcccccccccccc
Q 010932 216 -------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVI----------RGKNLLLLMDSSL 278 (497)
Q Consensus 216 -------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~----------~~~~~~~~~~~~~ 278 (497)
...+|+.|+|||++.+..++.++|||||||++|+|+||+.|+........ ........+....
T Consensus 189 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (318)
T 3lxp_A 189 EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE 268 (318)
T ss_dssp SEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred cccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhccc
Confidence 34567789999999999999999999999999999999987754322211 1111222233333
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhccc
Q 010932 279 EGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQT 322 (497)
Q Consensus 279 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~ 322 (497)
....+..++..+.+|+.+||+.||++|||+.++++.|+.+....
T Consensus 269 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 269 RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 44456667888999999999999999999999999999887544
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=376.48 Aligned_cols=251 Identities=23% Similarity=0.319 Sum_probs=211.9
Q ss_pred cccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 142 (497)
.+.+.+.||+|+||.||+|.++++..||||+++... ...+.|.+|+.+|++++||||+++++++.+ ...+|||||+++
T Consensus 268 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~ 345 (535)
T 2h8h_A 268 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSK 345 (535)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTT
T ss_pred hhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcC
Confidence 456778899999999999999888889999998654 346789999999999999999999999876 678999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-----Ccc
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-----KSY 217 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~~ 217 (497)
|+|.+++.......+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ...
T Consensus 346 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 424 (535)
T 2h8h_A 346 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 424 (535)
T ss_dssp EEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCST
T ss_pred CcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCC
Confidence 99999996543457999999999999999999999999 999999999999999999999999999865432 233
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
.+++.|+|||++.+..++.++|||||||+||||+| |+.||.......+. ..+....+...+..++..+.+||.+
T Consensus 425 ~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~l~~li~~ 499 (535)
T 2h8h_A 425 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-----DQVERGYRMPCPPECPESLHDLMCQ 499 (535)
T ss_dssp TSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHH-----HHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred cCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHcCCCCCCCCCCCHHHHHHHHH
Confidence 45678999999999999999999999999999999 88777654322211 1112222334456677889999999
Q ss_pred hcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 297 CLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
||+.||++|||+.+|++.|+.+...
T Consensus 500 cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 500 CWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp HTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred HcCCChhHCcCHHHHHHHHHHHhhc
Confidence 9999999999999999999988643
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-44 Score=347.26 Aligned_cols=262 Identities=18% Similarity=0.235 Sum_probs=203.4
Q ss_pred CCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC---hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
.+..+.+++.||+|+||.||+|... +|+.||||++....... .+.+.+|+.+++.++||||+++++++...+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 3456788899999999999999975 59999999997643333 4578999999999999999999999999999999
Q ss_pred EEEcCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC
Q 010932 136 VAQYMPNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD 213 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 213 (497)
||||+++++|.+++... ....+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||++.....
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 99999999999998642 3567999999999999999999999999 99999999999999999999999999875443
Q ss_pred C----CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHH
Q 010932 214 G----KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQ 289 (497)
Q Consensus 214 ~----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (497)
. ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||........... ..+.........+...+..
T Consensus 189 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 266 (310)
T 2wqm_A 189 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC--KKIEQCDYPPLPSDHYSEE 266 (310)
T ss_dssp ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHH--HHHHTTCSCCCCTTTSCHH
T ss_pred CCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHH--HHhhcccCCCCcccccCHH
Confidence 2 234688999999999999999999999999999999999998864321111000 0011111111122446678
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHhhhhhccccc
Q 010932 290 LVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEV 324 (497)
Q Consensus 290 l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~~ 324 (497)
+.+|+.+||+.||++|||+.++++.|+.+......
T Consensus 267 l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 267 LRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999765443
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-44 Score=345.56 Aligned_cols=256 Identities=16% Similarity=0.140 Sum_probs=207.4
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEEEc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
+.+.+++.||+|+||+||+|.+. +|+.||||++.... ..+.+.+|+.+++.+ +|+||+++++++......++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 45778888999999999999974 59999999986543 345689999999999 799999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCC-----eeEcccCCccccCCC
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGD-----PRLSSFGLMKNSRDG 214 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~-----~kl~Dfgla~~~~~~ 214 (497)
+ +++|.+++... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++. +||+|||+++.....
T Consensus 88 ~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~ 164 (298)
T 1csn_A 88 L-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164 (298)
T ss_dssp C-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred c-CCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence 9 99999999753 456999999999999999999999999 999999999999987766 999999999754332
Q ss_pred -----------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHH--hccccccccccccCCC
Q 010932 215 -----------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVI--RGKNLLLLMDSSLEGQ 281 (497)
Q Consensus 215 -----------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 281 (497)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||........ ....+...........
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (298)
T 1csn_A 165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRE 244 (298)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHH
T ss_pred cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHH
Confidence 345689999999999999999999999999999999999998865211000 0000000000000001
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhccc
Q 010932 282 YANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQT 322 (497)
Q Consensus 282 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~ 322 (497)
....+++.+.+|+.+||+.||++|||+.+|++.|+.+....
T Consensus 245 ~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~ 285 (298)
T 1csn_A 245 LCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 285 (298)
T ss_dssp HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence 12235678999999999999999999999999999887543
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-44 Score=351.00 Aligned_cols=238 Identities=18% Similarity=0.180 Sum_probs=202.7
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--------ChhHHHHHHHHhccCCCCcceeeeeeeeeCCc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--------DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 132 (497)
..|.+++.||+|+||+||+|.+. +|+.||||++...... ..+.+.+|+.+|+.++||||+++++++.+.+.
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~ 103 (335)
T 3dls_A 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF 103 (335)
T ss_dssp HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence 35678889999999999999975 5899999999765321 23468889999999999999999999999999
Q ss_pred eEEEEEcCCCC-ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcccc
Q 010932 133 RLLVAQYMPND-TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS 211 (497)
Q Consensus 133 ~~lv~e~~~~~-~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 211 (497)
.++||||+.+| +|.+++.. .+.+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..
T Consensus 104 ~~lv~e~~~~g~~l~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 180 (335)
T 3dls_A 104 FQLVMEKHGSGLDLFAFIDR--HPRLDEPLASYIFRQLVSAVGYLRLKD-IIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180 (335)
T ss_dssp EEEEEECCTTSCBHHHHHHT--CCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEEeCCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence 99999998766 99999865 567999999999999999999999999 999999999999999999999999999865
Q ss_pred CCCC---ccccCCCCCCccccccCCC-CcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHH
Q 010932 212 RDGK---SYSTNLAYTPPEFLRTGRV-IPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287 (497)
Q Consensus 212 ~~~~---~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (497)
.... ...||+.|+|||++.+..+ +.++|||||||++|+|++|+.||..... ..... ...+...+
T Consensus 181 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----------~~~~~--~~~~~~~~ 248 (335)
T 3dls_A 181 ERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE----------TVEAA--IHPPYLVS 248 (335)
T ss_dssp CTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG----------GTTTC--CCCSSCCC
T ss_pred CCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH----------HHhhc--cCCCcccC
Confidence 5432 4568999999999988776 8899999999999999999998854211 11111 11233356
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 288 TQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 288 ~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..+.+|+.+||+.||++|||+.+++++
T Consensus 249 ~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 249 KELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 779999999999999999999999997
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=344.90 Aligned_cols=254 Identities=22% Similarity=0.287 Sum_probs=210.0
Q ss_pred cccccc-cCCCCCCcEEEEEEEc---CCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 63 SELIVS-ESGDKAPNVVYRGRLK---NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 63 ~~~~~~-~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
.+.+++ .||+|+||.||+|.+. ++..||||+++.... ...+.+.+|+.+++.++||||+++++++ ..+..++||
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~ 88 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM 88 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence 345565 7999999999999864 478899999986532 2246799999999999999999999999 556789999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC--
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK-- 215 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 215 (497)
||+++++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||+++......
T Consensus 89 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 166 (287)
T 1u59_A 89 EMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 166 (287)
T ss_dssp ECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred EeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence 99999999999864 3567999999999999999999999999 9999999999999999999999999998654322
Q ss_pred -----ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHH
Q 010932 216 -----SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQ 289 (497)
Q Consensus 216 -----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (497)
...+|+.|+|||++.+..++.++|||||||++|+|+| |+.||......... ..+........+..++..
T Consensus 167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~ 241 (287)
T 1u59_A 167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM-----AFIEQGKRMECPPECPPE 241 (287)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHH-----HHHHTTCCCCCCTTCCHH
T ss_pred eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHH-----HHHhcCCcCCCCCCcCHH
Confidence 2345788999999998899999999999999999999 99887553322211 111112223455667788
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHhhhhhccccc
Q 010932 290 LVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEV 324 (497)
Q Consensus 290 l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~~ 324 (497)
+.+++.+||+.||++|||+.+++++|+.+......
T Consensus 242 l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 276 (287)
T 1u59_A 242 LYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 276 (287)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999998765443
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-44 Score=343.08 Aligned_cols=245 Identities=19% Similarity=0.269 Sum_probs=205.3
Q ss_pred CCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCC---CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
+..+.+++.||+|+||+||+|.+.. +..||||++.... ......+.+|+.+++.++||||+++++++.+....++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 4567888999999999999999764 7899999985421 22346789999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 214 (497)
|||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.++|+|||++......
T Consensus 88 ~e~~~~~~l~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~ 164 (279)
T 3fdn_A 88 LEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 164 (279)
T ss_dssp ECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-CEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred EecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHhEEEcCCCCEEEEeccccccCCcccc
Confidence 999999999999865 467999999999999999999999999 999999999999999999999999998654433
Q ss_pred CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHH
Q 010932 215 KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 294 (497)
....+|+.|+|||++.+..++.++||||||+++|+|++|..||............. ......+...+..+.+|+
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li 238 (279)
T 3fdn_A 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------RVEFTFPDFVTEGARDLI 238 (279)
T ss_dssp ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH------HTCCCCCTTSCHHHHHHH
T ss_pred cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHH------hCCCCCCCcCCHHHHHHH
Confidence 34578999999999999899999999999999999999999886543332211100 112234455677899999
Q ss_pred HHhcccCCCCCCCHHHHHHH
Q 010932 295 SKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 295 ~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+||+.||.+|||+.+++++
T Consensus 239 ~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 239 SRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp HHHCCSSGGGSCCHHHHHHC
T ss_pred HHHhccChhhCCCHHHHhhC
Confidence 99999999999999999996
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-44 Score=352.70 Aligned_cols=254 Identities=19% Similarity=0.302 Sum_probs=209.9
Q ss_pred CcccccccCCCCCCcEEEEEEEc--------CCcEEEEEEccCCCCC-ChhHHHHHHHHhccC-CCCcceeeeeeeeeCC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK--------NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGD 131 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 131 (497)
+.+.+++.||+|+||+||+|.+. ++..||||++...... ..+.+.+|+.+++.+ +||||+++++++...+
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 114 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC
Confidence 46678888999999999999863 4678999999754322 245789999999999 8999999999999999
Q ss_pred ceEEEEEcCCCCChhhhhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC
Q 010932 132 ERLLVAQYMPNDTLSKHLFHWDK--------------QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197 (497)
Q Consensus 132 ~~~lv~e~~~~~~L~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~ 197 (497)
..++||||+++++|.+++..... ..+++..++.++.||+.||.|||+++ ++||||||+|||++.+
T Consensus 115 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~ 193 (334)
T 2pvf_A 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTEN 193 (334)
T ss_dssp CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTT
T ss_pred ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCccceEEEcCC
Confidence 99999999999999999975321 34899999999999999999999999 9999999999999999
Q ss_pred CCeeEcccCCccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhcccc
Q 010932 198 GDPRLSSFGLMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNL 270 (497)
Q Consensus 198 ~~~kl~Dfgla~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~ 270 (497)
+.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|+|++ |+.|+.......+..
T Consensus 194 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~--- 270 (334)
T 2pvf_A 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK--- 270 (334)
T ss_dssp CCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH---
T ss_pred CCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHH---
Confidence 99999999999865432 22345788999999998899999999999999999999 888776543322211
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 271 LLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
.+........+..++..+.+|+.+||+.||.+|||+.+++++|+.+...
T Consensus 271 --~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~ 319 (334)
T 2pvf_A 271 --LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319 (334)
T ss_dssp --HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --HHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 1111122234455677899999999999999999999999999998754
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-44 Score=349.14 Aligned_cols=247 Identities=17% Similarity=0.187 Sum_probs=205.5
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC------ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP------DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
.|.+++.||+|+||.||++.+. +|+.||||++...... ..+.+.+|+.+++.++||||+++++++.+....++
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (321)
T 2a2a_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVL 92 (321)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 4678888999999999999986 4899999999754322 25679999999999999999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC----CeeEcccCCcccc
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG----DPRLSSFGLMKNS 211 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfgla~~~ 211 (497)
||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++ .+||+|||+++..
T Consensus 93 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~ 169 (321)
T 2a2a_A 93 ILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (321)
T ss_dssp EECCCCSCBHHHHHHT--CSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChHHEEEecCCCCcCCEEEccCccceec
Confidence 9999999999999965 567999999999999999999999999 99999999999999887 7999999999865
Q ss_pred CCC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHH
Q 010932 212 RDG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288 (497)
Q Consensus 212 ~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (497)
... ....||+.|+|||++.+..++.++|||||||++|+|++|+.||............... ........+...+.
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~ 247 (321)
T 2a2a_A 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV--SYDFDEEFFSHTSE 247 (321)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTT--CCCCCHHHHTTCCH
T ss_pred CccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc--ccccChhhhcccCH
Confidence 443 3456899999999999999999999999999999999999988654332221110000 00000011123456
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+.+|+.+||+.||++|||+.+++++
T Consensus 248 ~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 248 LAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp HHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 79999999999999999999999985
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-44 Score=344.33 Aligned_cols=247 Identities=18% Similarity=0.262 Sum_probs=205.7
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeee------------
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE------------ 129 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------------ 129 (497)
.+.+++.||+|+||.||+|.+. +|+.||||++.... +.+.+|+++++.++||||+++++++..
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 87 (284)
T 2a19_B 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNS 87 (284)
T ss_dssp HEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--------
T ss_pred ccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccc
Confidence 4567788899999999999986 59999999997543 468899999999999999999998854
Q ss_pred ----CCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEccc
Q 010932 130 ----GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSF 205 (497)
Q Consensus 130 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Df 205 (497)
....++||||+++++|.+++.......+++..+..++.||+.||.|||+++ ++|+||||+|||++.++.+||+||
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Df 166 (284)
T 2a19_B 88 SRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK-LINRDLKPSNIFLVDTKQVKIGDF 166 (284)
T ss_dssp -CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCC
T ss_pred cccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHEEEcCCCCEEECcc
Confidence 345799999999999999997655578999999999999999999999999 999999999999999999999999
Q ss_pred CCccccCCC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCC
Q 010932 206 GLMKNSRDG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282 (497)
Q Consensus 206 gla~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (497)
|++...... ....+|+.|+|||++.+..++.++|||||||++|+|++|..|+..... .. ..... ...
T Consensus 167 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-~~-----~~~~~----~~~ 236 (284)
T 2a19_B 167 GLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK-FF-----TDLRD----GII 236 (284)
T ss_dssp TTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH-HH-----HHHHT----TCC
T ss_pred hhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH-HH-----HHhhc----ccc
Confidence 998865443 345689999999999998999999999999999999999976532211 10 01111 122
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhccccc
Q 010932 283 ANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEV 324 (497)
Q Consensus 283 ~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~~ 324 (497)
+...+..+.+|+.+||+.||.+|||+.+++++|+.+....+.
T Consensus 237 ~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~ 278 (284)
T 2a19_B 237 SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278 (284)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence 334566789999999999999999999999999998765543
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=350.46 Aligned_cols=248 Identities=18% Similarity=0.180 Sum_probs=196.3
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC---hhHHHHHHHHhccCCCCcceeeeeeeeeCCc----e
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE----R 133 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----~ 133 (497)
+.|.+++.||+|+||.||++.+. +|+.||||++....... ...+.+|+.++++++||||+++++++..... .
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 46788889999999999999974 58999999998654433 3468999999999999999999999877554 3
Q ss_pred EEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC
Q 010932 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD 213 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 213 (497)
++||||++|++|.+++.. .+.+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++....
T Consensus 92 ~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp EEEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred EEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 999999999999999975 457999999999999999999999999 99999999999999999999999999975433
Q ss_pred C-------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHH
Q 010932 214 G-------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANED 286 (497)
Q Consensus 214 ~-------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (497)
. ....||+.|+|||++.+..++.++|||||||++|+|++|+.||................... ........
T Consensus 169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 246 (311)
T 3ork_A 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP--PSARHEGL 246 (311)
T ss_dssp -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCC--HHHHSTTC
T ss_pred cccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC--cccccCCC
Confidence 2 23468999999999999999999999999999999999999986553332211111110000 00011235
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 287 ATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 287 ~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+..+.+|+.+||+.||++||+..+++.+
T Consensus 247 ~~~l~~li~~~l~~dP~~R~~~~~~l~~ 274 (311)
T 3ork_A 247 SADLDAVVLKALAKNPENRYQTAAEMRA 274 (311)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred CHHHHHHHHHHHhcCHhhChhhHHHHHH
Confidence 6779999999999999999976665543
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-44 Score=343.93 Aligned_cols=250 Identities=20% Similarity=0.267 Sum_probs=204.2
Q ss_pred ccccCCCCCCcEEEEEEEcC----CcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCce-EEEEEc
Q 010932 66 IVSESGDKAPNVVYRGRLKN----NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER-LLVAQY 139 (497)
Q Consensus 66 ~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~-~lv~e~ 139 (497)
+.+.||+|+||+||+|.+.+ +..||+|++...... ..+.+.+|+.+++.++||||+++++++.+.+.. ++||||
T Consensus 25 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECC
T ss_pred cCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEec
Confidence 34778999999999998643 237999999754322 246789999999999999999999999876655 999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC------
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD------ 213 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------ 213 (497)
+.+++|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++....
T Consensus 105 ~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 182 (298)
T 3pls_A 105 MCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQK-FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSV 182 (298)
T ss_dssp CTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCS
T ss_pred ccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEeCcCCCcccccCCccccc
Confidence 999999999965 3567899999999999999999999999 99999999999999999999999999975432
Q ss_pred --CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHH
Q 010932 214 --GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291 (497)
Q Consensus 214 --~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (497)
.....+|+.|+|||.+.+..++.++|||||||++|+|++|..||...... ......+........+...+..+.
T Consensus 183 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~ 258 (298)
T 3pls_A 183 QQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP----FDLTHFLAQGRRLPQPEYCPDSLY 258 (298)
T ss_dssp CCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG----GGHHHHHHTTCCCCCCTTCCHHHH
T ss_pred ccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH----HHHHHHhhcCCCCCCCccchHHHH
Confidence 22345678999999999999999999999999999999977765432111 111111222222334455677899
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 292 ELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
+|+.+||+.||.+|||+.++++.|+.+...
T Consensus 259 ~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 259 QVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 999999999999999999999999998754
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=362.49 Aligned_cols=254 Identities=18% Similarity=0.159 Sum_probs=205.7
Q ss_pred HhcCCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC---CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCc
Q 010932 57 ATNGFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132 (497)
Q Consensus 57 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 132 (497)
..-..+.+.+++.||+|+||+||+++.+ +|+.||||++++.. ....+.+.+|..+|..++||||+++++++.+.+.
T Consensus 56 ~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~ 135 (412)
T 2vd5_A 56 VRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENY 135 (412)
T ss_dssp HSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSE
T ss_pred ccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCE
Confidence 3344566788889999999999999986 59999999996421 1123458899999999999999999999999999
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
.++||||++||+|.+++... +..+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++...
T Consensus 136 ~~lVmE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILld~~g~vkL~DFGla~~~~ 213 (412)
T 2vd5_A 136 LYLVMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRLG-YVHRDIKPDNILLDRCGHIRLADFGSCLKLR 213 (412)
T ss_dssp EEEEECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEEcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccCHHHeeecCCCCEEEeechhheecc
Confidence 99999999999999999652 357999999999999999999999999 9999999999999999999999999998654
Q ss_pred CC-----CccccCCCCCCccccc-------cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCC
Q 010932 213 DG-----KSYSTNLAYTPPEFLR-------TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEG 280 (497)
Q Consensus 213 ~~-----~~~~gt~~y~aPE~~~-------~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (497)
.. ....||+.|+|||++. +..++.++|||||||++|||++|+.||............... .......
T Consensus 214 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~-~~~~~~p 292 (412)
T 2vd5_A 214 ADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHY-KEHLSLP 292 (412)
T ss_dssp TTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTH-HHHCCCC
T ss_pred CCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhc-ccCcCCC
Confidence 43 2357899999999997 356899999999999999999999998765433222111110 0000011
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCC---CCHHHHHHH
Q 010932 281 QYANEDATQLVELASKCLQYEAKDR---PDVKFLLSA 314 (497)
Q Consensus 281 ~~~~~~~~~l~~li~~cl~~dp~~R---ps~~~ll~~ 314 (497)
..+...+..+.+||.+||+ +|.+| |+++++++|
T Consensus 293 ~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 293 LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp ----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 1224467789999999999 99998 599999886
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=374.31 Aligned_cols=251 Identities=19% Similarity=0.273 Sum_probs=209.9
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCC---CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQ---SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
.+.+.+++.||+|+||.||+|.++ +|+.||||++... .......+.+|+.+|+.++|||||++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 345778888999999999999986 5999999998643 223456789999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 214 (497)
|||++||+|.+++.......+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g-IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~ 341 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCchheEEEeCCCCeEEEecccceecccCcc
Confidence 99999999999997755566999999999999999999999999 999999999999999999999999999865543
Q ss_pred -CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHH
Q 010932 215 -KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVEL 293 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 293 (497)
....||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+...+. .....++...+..+.+|
T Consensus 342 ~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~-~~i~~~i~-~~~~~~p~~~s~~~~dL 419 (576)
T 2acx_A 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-EEVERLVK-EVPEEYSERFSPQARSL 419 (576)
T ss_dssp EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCH-HHHHHHHH-HCCCCCCTTSCHHHHHH
T ss_pred ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhH-HHHHHHhh-cccccCCccCCHHHHHH
Confidence 3457899999999999989999999999999999999999988653211000 00000010 11223455677889999
Q ss_pred HHHhcccCCCCCC-----CHHHHHHH
Q 010932 294 ASKCLQYEAKDRP-----DVKFLLSA 314 (497)
Q Consensus 294 i~~cl~~dp~~Rp-----s~~~ll~~ 314 (497)
|.+||+.||.+|| ++.+|++|
T Consensus 420 I~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 420 CSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp HHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred HHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 9999999999999 78999886
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-44 Score=357.84 Aligned_cols=245 Identities=19% Similarity=0.261 Sum_probs=200.8
Q ss_pred cccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCC--ChhHHHHHHHHhccCC--CCcceeeeeeeeeCCceEEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVR--HKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e 138 (497)
.|.+++.||+|+||+||++...+++.||||++...... ..+.+.+|+.+|+.++ ||||+++++++...+..++|||
T Consensus 57 ~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E 136 (390)
T 2zmd_A 57 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 136 (390)
T ss_dssp EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe
Confidence 47888999999999999999888999999999754332 2467899999999996 5999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---- 214 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 214 (497)
+.+++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 137 -~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~ 211 (390)
T 2zmd_A 137 -CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV 211 (390)
T ss_dssp -CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCCGGGEEES-SSCEEECCCSSSCCC-------
T ss_pred -cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEEE-CCeEEEEecCccccccCCCccc
Confidence 568899999976 458899999999999999999999999 99999999999996 589999999999865432
Q ss_pred --CccccCCCCCCcccccc-----------CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCC
Q 010932 215 --KSYSTNLAYTPPEFLRT-----------GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQ 281 (497)
Q Consensus 215 --~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (497)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..+..+++......
T Consensus 212 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~---~~~~~~~~~~~~~~ 288 (390)
T 2zmd_A 212 VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHEIE 288 (390)
T ss_dssp --CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH---HHHHHHHCTTSCCC
T ss_pred cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH---HHHHHHhCccccCC
Confidence 24578999999999875 368899999999999999999999886432111 11122233333333
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010932 282 YANEDATQLVELASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 282 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l 315 (497)
++...+..+.+||.+||+.||++|||+.+++++-
T Consensus 289 ~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 289 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 322 (390)
T ss_dssp CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred CCccchHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence 4444567899999999999999999999999863
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-44 Score=364.31 Aligned_cols=249 Identities=17% Similarity=0.194 Sum_probs=184.2
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeC-----Cce
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEG-----DER 133 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~ 133 (497)
+.|.+++.||+|+||+||+|.++ +|+.||||++...... ..+.+.+|+.+|+.++|||||++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 46788999999999999999976 5999999999754322 245789999999999999999999998543 568
Q ss_pred EEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC
Q 010932 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD 213 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 213 (497)
++||||+ +++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+||||+.++.+||+|||+++....
T Consensus 133 ~lv~e~~-~~~L~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~-iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRT--PVYLTELHIKTLLYNLLVGVKYVHSAG-ILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp EEEECCC-SEEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred EEEEecc-ccchhhhccc--CCCCCHHHHHHHHHHHHHHHHHHHhCC-cCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 9999998 5789998865 567999999999999999999999999 99999999999999999999999999986432
Q ss_pred -------------------------------CCccccCCCCCCccccc-cCCCCcccceeehhhhHHHHhh---------
Q 010932 214 -------------------------------GKSYSTNLAYTPPEFLR-TGRVIPESVIYSYGTVLLDLLS--------- 252 (497)
Q Consensus 214 -------------------------------~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slG~~l~ellt--------- 252 (497)
.....||+.|+|||++. +..++.++|||||||+||||++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~ 288 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH 288 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSG
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccc
Confidence 12346799999999864 5679999999999999999999
Q ss_pred --CCCCCCchhhHHHhc----------------c---ccc-----------------------ccccccc---CCCCCHH
Q 010932 253 --GKHIPPSHALDVIRG----------------K---NLL-----------------------LLMDSSL---EGQYANE 285 (497)
Q Consensus 253 --g~~~~~~~~~~~~~~----------------~---~~~-----------------------~~~~~~~---~~~~~~~ 285 (497)
|+.+|++...-.... . .+. ..+.... .....+.
T Consensus 289 ~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (458)
T 3rp9_A 289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPA 368 (458)
T ss_dssp GGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTT
T ss_pred ccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCC
Confidence 555554421100000 0 000 0000000 0011123
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 286 DATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 286 ~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+..+.+||.+||+.||++|||+.++|+|
T Consensus 369 ~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 369 SSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 46789999999999999999999999996
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-44 Score=355.57 Aligned_cols=251 Identities=20% Similarity=0.287 Sum_probs=195.4
Q ss_pred ccccccCCCCCCcEEEEEEEcC----CcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeee-CCceEEEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLKN----NRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAE-GDERLLVA 137 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~ 137 (497)
+.+.+.||+|+||+||+|.+.+ +..||||.++.... ...+.|.+|+.++++++||||+++++++.. .+..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 4556789999999999999642 24689999875432 234679999999999999999999998754 56789999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 214 (497)
||+++++|.+++.. ....+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 171 e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 248 (373)
T 3c1x_A 171 PYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 248 (373)
T ss_dssp ECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred ECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCccchheEEECCCCCEEEeeccccccccccccc
Confidence 99999999999965 3567899999999999999999999999 999999999999999999999999999754322
Q ss_pred -----CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCC-CCCchhhHHHhccccccccccccCCCCCHHHHH
Q 010932 215 -----KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKH-IPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288 (497)
Q Consensus 215 -----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (497)
....+|+.|+|||++.+..++.++|||||||++|||+||.. |+...... .....+........+..++.
T Consensus 249 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~-----~~~~~~~~~~~~~~p~~~~~ 323 (373)
T 3c1x_A 249 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-----DITVYLLQGRRLLQPEYCPD 323 (373)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS-----CHHHHHHTTCCCCCCTTCCH
T ss_pred cccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCH
Confidence 22345678999999999999999999999999999999554 44322111 11111111112233455677
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
.+.+++.+||+.||++|||+.++++.|+.+...
T Consensus 324 ~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~ 356 (373)
T 3c1x_A 324 PLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 356 (373)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 899999999999999999999999999988754
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-44 Score=344.13 Aligned_cols=243 Identities=12% Similarity=0.138 Sum_probs=203.5
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 138 (497)
.+.+++.||+|+||+||+|.+. +++.||||++....... ...+.+|+..+..+ +||||+++++++.+.+..++|||
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e 91 (289)
T 1x8b_A 12 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNE 91 (289)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEE
Confidence 4677888999999999999986 59999999998653333 45788999999999 89999999999999999999999
Q ss_pred cCCCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC-------------------
Q 010932 139 YMPNDTLSKHLFHWD--KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED------------------- 197 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~------------------- 197 (497)
|+++++|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.+
T Consensus 92 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~ 170 (289)
T 1x8b_A 92 YCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS-LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNK 170 (289)
T ss_dssp CCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEC--------------------C
T ss_pred ecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeecCCCHHHEEEcCCCCCcccccccccccccCCc
Confidence 999999999996532 267999999999999999999999999 9999999999999844
Q ss_pred CCeeEcccCCccccCCCCccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccccccc
Q 010932 198 GDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDS 276 (497)
Q Consensus 198 ~~~kl~Dfgla~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~ 276 (497)
+.+||+|||++..........||+.|+|||++.+. .++.++|||||||++|+|++|..++....... . +..
T Consensus 171 ~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~-------~-~~~ 242 (289)
T 1x8b_A 171 VMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWH-------E-IRQ 242 (289)
T ss_dssp CCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHH-------H-HHT
T ss_pred eEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHH-------H-HHc
Confidence 47999999999987777777899999999999865 56789999999999999999997654322111 0 111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 277 SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 277 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
......+...+..+.+|+.+||+.||++|||+.+++++
T Consensus 243 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 243 GRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp TCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 11223445567789999999999999999999999986
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=338.57 Aligned_cols=242 Identities=19% Similarity=0.189 Sum_probs=205.1
Q ss_pred cccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
.+.+.+.||+|+||+||+|.+.. +..||+|++........+.+.+|+++++.++||||+++++++.+....++||||++
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (277)
T 3f3z_A 10 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCT 89 (277)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred hEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccC
Confidence 46778889999999999999865 78999999987666677889999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEe---CCCCCeeEcccCCccccCCC---C
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF---DEDGDPRLSSFGLMKNSRDG---K 215 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~---~ 215 (497)
+++|.+++.. ...+++..+..++.|++.||.|||+++ ++|+||||+|||+ +.++.+||+|||++...... .
T Consensus 90 ~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~ 166 (277)
T 3f3z_A 90 GGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKLN-VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 166 (277)
T ss_dssp SCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBC
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchh
Confidence 9999998865 467999999999999999999999999 9999999999999 78899999999999765433 3
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCH----HHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYAN----EDATQLV 291 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~ 291 (497)
...+|+.|+|||++.+ .++.++||||||+++|+|++|+.||............ ... ....+. ..++.+.
T Consensus 167 ~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~ 239 (277)
T 3f3z_A 167 TKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKI----REG--TFTFPEKDWLNVSPQAE 239 (277)
T ss_dssp CCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----HHC--CCCCCHHHHTTSCHHHH
T ss_pred ccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHH----HhC--CCCCCchhhhcCCHHHH
Confidence 4578999999999875 4999999999999999999999988654332221111 110 011122 3467899
Q ss_pred HHHHHhcccCCCCCCCHHHHHHH
Q 010932 292 ELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+|+.+||+.||++|||+.+++++
T Consensus 240 ~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 240 SLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp HHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHHHHccCChhhCcCHHHHhcC
Confidence 99999999999999999999975
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-44 Score=349.50 Aligned_cols=254 Identities=19% Similarity=0.272 Sum_probs=207.7
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcE--EEEEEccCCC-CCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRL--VAIKRFSRQS-WPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~--vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 136 (497)
+.+.+++.||+|+||.||+|.+. +|.. ||||.+.... ....+.+.+|+.+++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 46678888999999999999975 4664 4999987532 23456799999999999 899999999999999999999
Q ss_pred EEcCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeE
Q 010932 137 AQYMPNDTLSKHLFHWD--------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRL 202 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl 202 (497)
|||+++++|.+++.... ...+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kL 183 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKI 183 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCccceEEEcCCCeEEE
Confidence 99999999999997532 247999999999999999999999999 999999999999999999999
Q ss_pred cccCCccccCC---CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhcccccccccccc
Q 010932 203 SSFGLMKNSRD---GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSL 278 (497)
Q Consensus 203 ~Dfgla~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (497)
+|||+++.... .....+|+.|+|||++.+..++.++|||||||++|+|+| |+.||.......... .+....
T Consensus 184 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~-----~~~~~~ 258 (327)
T 1fvr_A 184 ADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE-----KLPQGY 258 (327)
T ss_dssp CCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH-----HGGGTC
T ss_pred cccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHH-----HhhcCC
Confidence 99999874332 223456789999999998889999999999999999998 988876543322211 111122
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 279 EGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 279 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
....+...+..+.+|+.+||+.||.+|||+.+++++|+.+...
T Consensus 259 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 259 RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 2334455678899999999999999999999999999988754
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=344.27 Aligned_cols=257 Identities=18% Similarity=0.197 Sum_probs=204.4
Q ss_pred cCCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC---hhHHHHHHHHhccCCCCcceeeeeeeeeCCceE
Q 010932 59 NGFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 59 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 134 (497)
..+..|.+++.||+|+||.||++.+. +++.||||++....... .+.+.+|+.+++.++||||+++++++...+..+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 2h34_A 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY 110 (309)
T ss_dssp ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence 34678899999999999999999976 58999999997643322 367899999999999999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
+||||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++|+||||+|||++.++.+||+|||++......
T Consensus 111 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRR--QGPLAPPRAVAIVRQIGSALDAAHAAG-ATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EEEECCCCEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCc-CCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 99999999999999975 457999999999999999999999999 999999999999999999999999998754432
Q ss_pred -----CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHH
Q 010932 215 -----KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQ 289 (497)
Q Consensus 215 -----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (497)
....+|+.|+|||++.+..++.++||||||+++|+|++|+.||........... +.... ......+...+..
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~ 264 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAH-INQAI--PRPSTVRPGIPVA 264 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHH-HHSCC--CCGGGTSTTCCTH
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHH-hccCC--CCccccCCCCCHH
Confidence 245688999999999989999999999999999999999998876544322111 11100 0111233456677
Q ss_pred HHHHHHHhcccCCCCCC-CHHHHHHHhhhhhcc
Q 010932 290 LVELASKCLQYEAKDRP-DVKFLLSAVAPLQKQ 321 (497)
Q Consensus 290 l~~li~~cl~~dp~~Rp-s~~~ll~~l~~~~~~ 321 (497)
+.+|+.+||+.||++|| |++++++.|+.....
T Consensus 265 l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 265 FDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp HHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred HHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 99999999999999999 999999999887544
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-44 Score=341.15 Aligned_cols=248 Identities=18% Similarity=0.179 Sum_probs=206.2
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
+.|.+++.||+|+||+||+|.++. |+.||+|++...... ..+.+.+|+.++++++||||+++++++......++|||
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 85 (284)
T 3kk8_A 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 85 (284)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 567888899999999999999864 899999999754332 24578899999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCC---eeEcccCCccccCCCC
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGD---PRLSSFGLMKNSRDGK 215 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfgla~~~~~~~ 215 (497)
|+++++|.+.+.. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++. +||+|||++.......
T Consensus 86 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~ 162 (284)
T 3kk8_A 86 LVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 162 (284)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC
T ss_pred cCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc
Confidence 9999999998865 467999999999999999999999999 999999999999986655 9999999997655432
Q ss_pred ---ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 216 ---SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 216 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
...||+.|+|||++.+..++.++||||||+++|+|++|+.||.................. .........++.+.+
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 240 (284)
T 3kk8_A 163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD--YPSPEWDTVTPEAKS 240 (284)
T ss_dssp BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCTTTTTTSCHHHHH
T ss_pred cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcccc--CCchhhcccCHHHHH
Confidence 357899999999999999999999999999999999999988655333222211111110 111112345678999
Q ss_pred HHHHhcccCCCCCCCHHHHHHH
Q 010932 293 LASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~ 314 (497)
|+.+||+.||++|||+.+++++
T Consensus 241 li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 241 LIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHHHHcccChhhCCCHHHHhcC
Confidence 9999999999999999999986
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-44 Score=348.01 Aligned_cols=256 Identities=18% Similarity=0.272 Sum_probs=205.5
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeee----CCceEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE----GDERLLV 136 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv 136 (497)
..+.+++.||+|+||.||++... +|+.||||++........+.+.+|+.+++.++||||+++++++.. ....++|
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 46788899999999999999974 599999999876544446789999999999999999999999863 3478999
Q ss_pred EEcCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 137 AQYMPNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
|||+++++|.+++... ....+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++......
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 187 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG-YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIH 187 (317)
T ss_dssp EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCSSCEESCEE
T ss_pred EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCCEEEEecCcchhcccc
Confidence 9999999999988642 3567999999999999999999999999 999999999999999999999999998754321
Q ss_pred -------------CccccCCCCCCccccccCC---CCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccccccccc
Q 010932 215 -------------KSYSTNLAYTPPEFLRTGR---VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSL 278 (497)
Q Consensus 215 -------------~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (497)
....||+.|+|||++.+.. ++.++|||||||++|+|++|+.||..... .............
T Consensus 188 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~~ 264 (317)
T 2buj_A 188 VEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ---KGDSVALAVQNQL 264 (317)
T ss_dssp EESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHH---TTSCHHHHHHCC-
T ss_pred cccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhc---ccchhhHHhhccC
Confidence 1234689999999997554 68899999999999999999988743211 0111111111112
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 279 EGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 279 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
....+...+..+.+|+.+||+.||.+|||+.+++++|+.+...
T Consensus 265 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 265 SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 2223345677899999999999999999999999999988643
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-44 Score=344.02 Aligned_cols=254 Identities=20% Similarity=0.277 Sum_probs=203.5
Q ss_pred CcccccccCCCCCCcEEEEEEEcC----CcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeee-eCCceEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN----NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCA-EGDERLL 135 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~l 135 (497)
..+.+.+.||+|+||+||+|.+.+ +..||+|.+...... ..+.+.+|+.++++++||||+++++++. ..+..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 356777889999999999999643 336899998754322 2467899999999999999999999864 4567899
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG- 214 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 214 (497)
||||+++++|.+++.. ....+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 105 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 182 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 182 (298)
T ss_dssp EEECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGG
T ss_pred EEeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEECCCCCEEECcccccccccccc
Confidence 9999999999999965 3567899999999999999999999999 999999999999999999999999999754332
Q ss_pred -------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHH
Q 010932 215 -------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287 (497)
Q Consensus 215 -------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (497)
....+|+.|+|||.+.+..++.++|||||||++|+|++|..|+...... ...............+..++
T Consensus 183 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 258 (298)
T 3f66_A 183 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT----FDITVYLLQGRRLLQPEYCP 258 (298)
T ss_dssp GCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT----TTHHHHHHTTCCCCCCTTCC
T ss_pred hhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH----HHHHHHHhcCCCCCCCccCC
Confidence 2345678899999999999999999999999999999966554322111 01111111111222344566
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 288 TQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 288 ~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
..+.+++.+||+.||++|||+.++++.|+.+...
T Consensus 259 ~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 259 DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 7899999999999999999999999999988754
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-44 Score=356.52 Aligned_cols=256 Identities=11% Similarity=0.118 Sum_probs=201.9
Q ss_pred CcccccccCCCCCCcEEEEEEEcC------CcEEEEEEccCCCCCC-----------hhHHHHHHHHhccCCCCcceeee
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQSWPD-----------PHQFVTEAAGLGNVRHKRLVNLI 124 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~~~ 124 (497)
..+.+++.||+|+||+||+|.+++ ++.||||++....... ...+..|+..+..++||||++++
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~ 114 (364)
T 3op5_A 35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW 114 (364)
T ss_dssp CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence 467888999999999999999764 4789999987543110 12344566677788899999999
Q ss_pred eeeeeC----CceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC--CCC
Q 010932 125 GCCAEG----DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD--EDG 198 (497)
Q Consensus 125 ~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~--~~~ 198 (497)
+++... ...+|||||+ +++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++ .++
T Consensus 115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~-iiHrDlkp~Nill~~~~~~ 191 (364)
T 3op5_A 115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEHE-YVHGDIKASNLLLNYKNPD 191 (364)
T ss_dssp EEEEEEETTEEEEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEESSCTT
T ss_pred eeeeeccCCcceEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eEEecCCHHHEEEecCCCC
Confidence 998775 4589999999 9999999976 3467999999999999999999999999 99999999999999 889
Q ss_pred CeeEcccCCccccCCC-----------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHh-
Q 010932 199 DPRLSSFGLMKNSRDG-----------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIR- 266 (497)
Q Consensus 199 ~~kl~Dfgla~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~- 266 (497)
.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||+||+.||.........
T Consensus 192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~ 271 (364)
T 3op5_A 192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYV 271 (364)
T ss_dssp CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHH
Confidence 9999999999754321 2345899999999999999999999999999999999999988643111110
Q ss_pred -------ccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcccc
Q 010932 267 -------GKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323 (497)
Q Consensus 267 -------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~ 323 (497)
...+..+++..+. ...++..+.+|+..||+.||.+|||+.+|++.|+.+.....
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~ 332 (364)
T 3op5_A 272 RDSKIRYRENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG 332 (364)
T ss_dssp HHHHHHHHHCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhhhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 0111111111111 12346779999999999999999999999999988875433
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=351.34 Aligned_cols=250 Identities=19% Similarity=0.161 Sum_probs=201.6
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCC-----CCcceeeeeeeeeCCceEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR-----HKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~~~~~~~~~~~~~l 135 (497)
..|.+++.||+|+||+||+|.+. +|+.||||++.... ...+.+..|+.+++.++ ||||+++++++...+..++
T Consensus 35 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~l 113 (360)
T 3llt_A 35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCL 113 (360)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEE
T ss_pred CEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEE
Confidence 35688889999999999999985 58999999997422 22456788999999886 9999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC-------------------
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE------------------- 196 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~------------------- 196 (497)
||||+ +++|.+++.......+++..+..++.||+.||.|||+++ |+||||||+|||++.
T Consensus 114 v~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~ 191 (360)
T 3llt_A 114 IFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS-LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKI 191 (360)
T ss_dssp EECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEE
T ss_pred EEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCcccEEEccccccccccchhcccccccc
Confidence 99999 999999998765567999999999999999999999999 999999999999975
Q ss_pred ------CCCeeEcccCCccccCC-CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc-
Q 010932 197 ------DGDPRLSSFGLMKNSRD-GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK- 268 (497)
Q Consensus 197 ------~~~~kl~Dfgla~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~- 268 (497)
++.+||+|||+++.... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...........
T Consensus 192 ~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~ 271 (360)
T 3llt_A 192 QIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMM 271 (360)
T ss_dssp EEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHH
Confidence 78999999999986543 3456789999999999999999999999999999999999998865322111000
Q ss_pred ------------------ccccccc-cccCCCCC--------------------HHHHHHHHHHHHHhcccCCCCCCCHH
Q 010932 269 ------------------NLLLLMD-SSLEGQYA--------------------NEDATQLVELASKCLQYEAKDRPDVK 309 (497)
Q Consensus 269 ------------------~~~~~~~-~~~~~~~~--------------------~~~~~~l~~li~~cl~~dp~~Rps~~ 309 (497)
....... ......++ ...++.+.+|+.+||+.||++|||+.
T Consensus 272 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~ 351 (360)
T 3llt_A 272 ESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPA 351 (360)
T ss_dssp HHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred HHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHH
Confidence 0000000 00000000 01126688999999999999999999
Q ss_pred HHHHH
Q 010932 310 FLLSA 314 (497)
Q Consensus 310 ~ll~~ 314 (497)
++|++
T Consensus 352 elL~h 356 (360)
T 3llt_A 352 ELLKH 356 (360)
T ss_dssp HHTTS
T ss_pred HHhcC
Confidence 99875
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-44 Score=350.40 Aligned_cols=258 Identities=18% Similarity=0.299 Sum_probs=210.5
Q ss_pred CcccccccCCCCCCcEEEEEEE-----cCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCC--ceE
Q 010932 62 SSELIVSESGDKAPNVVYRGRL-----KNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD--ERL 134 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~ 134 (497)
..+.+++.||+|+||.||++.+ .+|+.||||++........+.+.+|+.+++.++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 3567889999999999999984 358999999998765444678999999999999999999999986643 789
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
+||||+++++|.+++... ...+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||+++.....
T Consensus 121 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~ 198 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQD 198 (326)
T ss_dssp EEECCCTTCBHHHHHHHS-TTSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCSS
T ss_pred EEEECCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEEcCCCcEEEecCcchhhcccc
Confidence 999999999999999763 456999999999999999999999999 999999999999999999999999999865443
Q ss_pred C-------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHh---c--------ccccccccc
Q 010932 215 K-------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIR---G--------KNLLLLMDS 276 (497)
Q Consensus 215 ~-------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~---~--------~~~~~~~~~ 276 (497)
. ...+|+.|+|||++.+..++.++|||||||++|+|+||..|+......... . ..+...+..
T Consensus 199 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (326)
T 2w1i_A 199 KEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 278 (326)
T ss_dssp CSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred ccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhc
Confidence 2 234567799999999889999999999999999999999776432211110 0 011112222
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 277 SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 277 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
......+..++..+.+|+.+||+.||++|||+.++++.|+.+..+
T Consensus 279 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 279 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 222334566778899999999999999999999999999988653
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-44 Score=369.58 Aligned_cols=252 Identities=19% Similarity=0.258 Sum_probs=208.1
Q ss_pred CCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC---CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
..+.+.+++.||+|+||+||+++++ +|+.||||++.... ....+.+.+|+.+|+.++||||+++++++.+....++
T Consensus 183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 262 (543)
T 3c4z_A 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL 262 (543)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence 3466778888999999999999986 49999999996432 2345678999999999999999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC
Q 010932 136 VAQYMPNDTLSKHLFHWD--KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD 213 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 213 (497)
||||++||+|..++.... ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g-IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC-CcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 999999999999987543 457999999999999999999999999 99999999999999999999999999986543
Q ss_pred C----CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHH
Q 010932 214 G----KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQ 289 (497)
Q Consensus 214 ~----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (497)
. ....||+.|+|||++.+..++.++|||||||++|||++|+.||...............+... ...++...+..
T Consensus 342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~--~~~~p~~~s~~ 419 (543)
T 3c4z_A 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ--AVTYPDKFSPA 419 (543)
T ss_dssp TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC--CCCCCTTSCHH
T ss_pred CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc--ccCCCcccCHH
Confidence 3 23589999999999999999999999999999999999999886542110000000111111 12345667788
Q ss_pred HHHHHHHhcccCCCCCCCH-----HHHHHH
Q 010932 290 LVELASKCLQYEAKDRPDV-----KFLLSA 314 (497)
Q Consensus 290 l~~li~~cl~~dp~~Rps~-----~~ll~~ 314 (497)
+.+||.+||+.||++||++ .+|+++
T Consensus 420 ~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 420 SKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp HHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred HHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 9999999999999999965 667764
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=343.79 Aligned_cols=248 Identities=17% Similarity=0.195 Sum_probs=204.5
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
..+.+++.||+|+||.||++... +|+.||||++........+.+.+|+.+++.++||||+++++++.+....++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence 35677888999999999999986 59999999998665445567999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEe---CCCCCeeEcccCCccccCCC--C
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF---DEDGDPRLSSFGLMKNSRDG--K 215 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~--~ 215 (497)
++++|.+++.. .+.+++..+..++.||+.||.|||+.+ ++|+||||+|||+ +.++.+||+|||+++..... .
T Consensus 89 ~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 165 (304)
T 2jam_A 89 SGGELFDRILE--RGVYTEKDASLVIQQVLSAVKYLHENG-IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS 165 (304)
T ss_dssp CSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTH
T ss_pred CCccHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccc
Confidence 99999999865 457999999999999999999999999 9999999999999 78899999999998765433 2
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||................. ..........+..+.+|+.
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~li~ 243 (304)
T 2jam_A 166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYY--EFESPFWDDISESAKDFIC 243 (304)
T ss_dssp HHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCC--CCCTTTTTTSCHHHHHHHH
T ss_pred cccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC--CCCccccccCCHHHHHHHH
Confidence 34689999999999999999999999999999999999998865433222111100000 1112233456778999999
Q ss_pred HhcccCCCCCCCHHHHHHH
Q 010932 296 KCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~ 314 (497)
+||+.||++|||+.+++++
T Consensus 244 ~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 244 HLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp HHHCSSTTTSCCHHHHHTS
T ss_pred HHcCCChhHCcCHHHHhcC
Confidence 9999999999999999985
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-44 Score=347.11 Aligned_cols=247 Identities=18% Similarity=0.165 Sum_probs=197.8
Q ss_pred ccccc-ccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEEEc
Q 010932 63 SELIV-SESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 63 ~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
.|.++ +.||+|+||+||+|... +|+.||||++........+.+.+|+.+|.++ +||||+++++++.+.+..++||||
T Consensus 13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 92 (316)
T 2ac3_A 13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK 92 (316)
T ss_dssp SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEc
Confidence 45554 56899999999999965 5999999999876655678899999999885 799999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCC---eeEcccCCccccCCC--
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGD---PRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfgla~~~~~~-- 214 (497)
+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++. +||+|||++......
T Consensus 93 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 169 (316)
T 2ac3_A 93 MRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNKG-IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169 (316)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------
T ss_pred CCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCc
Confidence 999999999976 467999999999999999999999999 999999999999998776 999999998754321
Q ss_pred ---------CccccCCCCCCcccccc-----CCCCcccceeehhhhHHHHhhCCCCCCchhhHHH-----------hccc
Q 010932 215 ---------KSYSTNLAYTPPEFLRT-----GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVI-----------RGKN 269 (497)
Q Consensus 215 ---------~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~-----------~~~~ 269 (497)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........ ....
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 249 (316)
T 2ac3_A 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML 249 (316)
T ss_dssp ------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHH
T ss_pred cccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHH
Confidence 13458999999999975 5588999999999999999999998864321000 0000
Q ss_pred cccccccccCCCCCH----HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 270 LLLLMDSSLEGQYAN----EDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 270 ~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
...+... ...++. ..+..+.+|+.+||+.||++|||+.+++++
T Consensus 250 ~~~i~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 250 FESIQEG--KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHC--CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHhcc--CcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0000011 111221 246789999999999999999999999986
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=373.96 Aligned_cols=245 Identities=21% Similarity=0.291 Sum_probs=204.5
Q ss_pred cCCCCCCcEEEEEEEc---CCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCC
Q 010932 69 ESGDKAPNVVYRGRLK---NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDT 144 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 144 (497)
+||+|+||+||+|.++ ++..||||+++.... ...+.|.+|+.+|++++|||||++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6899999999999874 366899999986533 346789999999999999999999999976 56899999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-------cc
Q 010932 145 LSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK-------SY 217 (497)
Q Consensus 145 L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-------~~ 217 (497)
|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ..
T Consensus 422 L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~ 499 (613)
T 2ozo_A 422 LHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 499 (613)
T ss_dssp HHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCSTTTTCC------------
T ss_pred HHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCC
Confidence 9999965 3567999999999999999999999999 9999999999999999999999999998654321 12
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
.+|+.|+|||++.+..++.++|||||||+||||+| |+.||.......+ ...+........+..++..+.+||.+
T Consensus 500 ~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~-----~~~i~~~~~~~~p~~~~~~l~~li~~ 574 (613)
T 2ozo_A 500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV-----MAFIEQGKRMECPPECPPELYALMSD 574 (613)
T ss_dssp --CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHH-----HHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred CCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH-----HHHHHcCCCCCCCCcCCHHHHHHHHH
Confidence 34578999999999999999999999999999998 9988865432221 12222223344566778899999999
Q ss_pred hcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 297 CLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
||+.||++|||+.+|++.|+.+...
T Consensus 575 cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 575 CWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp TTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HcCCChhHCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999887543
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=345.33 Aligned_cols=250 Identities=19% Similarity=0.253 Sum_probs=199.2
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
..|.+++.||+|+||+||+|.+.. |+.||||++....... .+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 467888999999999999999864 9999999987654322 3568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---- 214 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 214 (497)
|+++++|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 83 ~~~~~~l~~~~~~--~~~~~~~~~~~i~~~l~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (311)
T 4agu_A 83 YCDHTVLHELDRY--QRGVPEHLVKSITWQTLQAVNFCHKHN-CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY 159 (311)
T ss_dssp CCSEEHHHHHHHT--SSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred eCCCchHHHHHhh--hcCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCChhhEEEcCCCCEEEeeCCCchhccCccccc
Confidence 9999999988764 567999999999999999999999999 999999999999999999999999999865432
Q ss_pred CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc----------------ccccc-
Q 010932 215 KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL----------------LLMDS- 276 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~----------------~~~~~- 276 (497)
....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.............. .....
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (311)
T 4agu_A 160 DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGV 239 (311)
T ss_dssp ------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTC
T ss_pred CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccC
Confidence 34568899999999976 5689999999999999999999998865432211100000 00000
Q ss_pred ccC--CCC------CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 277 SLE--GQY------ANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 277 ~~~--~~~------~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
... ... .+..+..+.+|+.+||+.||++|||+++++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 240 KIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000 000 12356679999999999999999999999986
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-44 Score=342.30 Aligned_cols=253 Identities=17% Similarity=0.248 Sum_probs=207.1
Q ss_pred Ccccccc-cCCCCCCcEEEEEEEc---CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 62 SSELIVS-ESGDKAPNVVYRGRLK---NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 62 ~~~~~~~-~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
..+.+.+ .||+|+||+||+|.+. +++.||||+++...... .+.+.+|+.+++.++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 3456666 7999999999999643 37899999997654332 46799999999999999999999999 5677899
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK 215 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 215 (497)
||||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++|+||||+|||++.++.+||+|||++.......
T Consensus 95 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 171 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 171 (291)
T ss_dssp EEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred EEEeCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhCC-eEcCCCCcceEEEeCCCcEEEccCCcceeeccCC
Confidence 9999999999999976 467999999999999999999999999 9999999999999999999999999998654332
Q ss_pred -------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHH
Q 010932 216 -------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287 (497)
Q Consensus 216 -------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (497)
...+|+.|+|||++.+..++.++||||||+++|+|++ |+.||......... ..+........+..++
T Consensus 172 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 246 (291)
T 1xbb_A 172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-----AMLEKGERMGCPAGCP 246 (291)
T ss_dssp SEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-----HHHHTTCCCCCCTTCC
T ss_pred CcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH-----HHHHcCCCCCCCCCCC
Confidence 2234678999999998899999999999999999999 98887654332221 1111222234455677
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcccc
Q 010932 288 TQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323 (497)
Q Consensus 288 ~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~ 323 (497)
..+.+++.+||+.||++|||+.++++.|+.+.....
T Consensus 247 ~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 282 (291)
T 1xbb_A 247 REMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 282 (291)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 889999999999999999999999999999875433
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-44 Score=363.77 Aligned_cols=247 Identities=21% Similarity=0.231 Sum_probs=193.1
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeC------Cc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG------DE 132 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~ 132 (497)
..|.+++.||+|+||+||+|.+. +|+.||||++..... ...+.+.+|+.+|+.++||||+++++++... .+
T Consensus 62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 141 (464)
T 3ttj_A 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 141 (464)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCe
Confidence 56788899999999999999976 489999999975421 2246789999999999999999999999654 35
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
.++||||++++ |.+.+. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 142 ~~lv~E~~~~~-l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 215 (464)
T 3ttj_A 142 VYLVMELMDAN-LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215 (464)
T ss_dssp EEEEEECCSEE-HHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred EEEEEeCCCCC-HHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence 69999999765 666663 35999999999999999999999999 9999999999999999999999999998655
Q ss_pred CC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc------------------
Q 010932 213 DG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL------------------ 271 (497)
Q Consensus 213 ~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~------------------ 271 (497)
.. ....||+.|+|||++.+..++.++|||||||++|||++|+.||.+..........+.
T Consensus 216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~ 295 (464)
T 3ttj_A 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 295 (464)
T ss_dssp -CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHH
T ss_pred CCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhh
Confidence 43 346789999999999999999999999999999999999999876432111000000
Q ss_pred cccc---------------cccCCC---CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 272 LLMD---------------SSLEGQ---YANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 272 ~~~~---------------~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..+. ...... .....+..+.+|+.+||+.||++|||+.++++|
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 000000 001226789999999999999999999999986
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-44 Score=348.38 Aligned_cols=251 Identities=19% Similarity=0.237 Sum_probs=194.6
Q ss_pred CCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
.++.|.+++.||+|+||+||+|.+. +|+.||||++....... .+.+.+|+.+|+.++||||+++++++.+....++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 3457888999999999999999975 59999999997543322 45688999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC-----CCCCeeEcccCCcccc
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD-----EDGDPRLSSFGLMKNS 211 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~-----~~~~~kl~Dfgla~~~ 211 (497)
|||++ ++|.+++.. .+.+++..+..++.||+.||.|||+++ ++||||||+|||++ .++.+||+|||+++..
T Consensus 112 ~e~~~-~~L~~~~~~--~~~~~~~~~~~i~~ql~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~ 187 (329)
T 3gbz_A 112 FEYAE-NDLKKYMDK--NPDVSMRVIKSFLYQLINGVNFCHSRR-CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187 (329)
T ss_dssp EECCS-EEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred EecCC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence 99997 589999876 457999999999999999999999999 99999999999994 4556999999999754
Q ss_pred CCC----CccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccc--cc---------
Q 010932 212 RDG----KSYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLL--MD--------- 275 (497)
Q Consensus 212 ~~~----~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~--~~--------- 275 (497)
... ....+|+.|+|||++.+. .++.++|||||||++|+|++|+.||................ .+
T Consensus 188 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (329)
T 3gbz_A 188 GIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTA 267 (329)
T ss_dssp C-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred CCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhh
Confidence 322 345679999999999874 48999999999999999999999886543221111100000 00
Q ss_pred -cccCCC------------CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 276 -SSLEGQ------------YANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 276 -~~~~~~------------~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+..... .+...+..+.+|+.+||+.||++|||+.+++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 268 LPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp STTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 000000 011245789999999999999999999999985
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-44 Score=354.37 Aligned_cols=250 Identities=12% Similarity=0.111 Sum_probs=197.1
Q ss_pred CcccccccCCCCCCcEEEEEEEc----CCcEEEEEEccCCCCC-----------ChhHHHHHHHHhccCCCCcceeeeee
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK----NNRLVAIKRFSRQSWP-----------DPHQFVTEAAGLGNVRHKRLVNLIGC 126 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~~~~~ 126 (497)
..+.+++.||+|+||+||+|.+. ++..||||++...... ....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 46788899999999999999975 4789999998765321 12346788899999999999999999
Q ss_pred eee----CCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC--Ce
Q 010932 127 CAE----GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG--DP 200 (497)
Q Consensus 127 ~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~--~~ 200 (497)
+.. ....++||||+ +++|.+++.. .+.+++..++.++.||+.||.|||+++ ++||||||+|||++.++ .+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~ 192 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQ--NGTFKKSTVLQLGIRMLDVLEYIHENE-YVHGDIKAANLLLGYKNPDQV 192 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBG--GGBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEESSSTTSE
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCcCHHHEEEccCCCCcE
Confidence 988 67899999999 9999999965 348999999999999999999999999 99999999999998877 99
Q ss_pred eEcccCCccccCCC-----------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccc
Q 010932 201 RLSSFGLMKNSRDG-----------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKN 269 (497)
Q Consensus 201 kl~Dfgla~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~ 269 (497)
||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||++|+.||............
T Consensus 193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~ 272 (345)
T 2v62_A 193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQT 272 (345)
T ss_dssp EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHH
T ss_pred EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHH
Confidence 99999999754221 2346899999999999989999999999999999999999988542111110000
Q ss_pred cccccccccCCCCCH---------HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 270 LLLLMDSSLEGQYAN---------EDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 270 ~~~~~~~~~~~~~~~---------~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
.... .....+. ..+..+.+|+.+||+.||++|||+.+|++.|+.+.
T Consensus 273 ~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 273 AKTN----LLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHH----HHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred HHHh----hcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 0000 0011111 45668999999999999999999999999998865
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-44 Score=349.03 Aligned_cols=253 Identities=21% Similarity=0.281 Sum_probs=207.9
Q ss_pred CcccccccCCCCCCcEEEEEEEc------CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK------NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 134 (497)
..+.+.+.||+|+||.||+|.+. +++.||||++...... ....+.+|+.+++.++||||+++++++.+.+..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 104 (322)
T 1p4o_A 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 104 (322)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred hheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccE
Confidence 34677888999999999999864 3788999999754322 2346899999999999999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccC
Q 010932 135 LVAQYMPNDTLSKHLFHWD--------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFG 206 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~--------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg 206 (497)
+||||+++++|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||
T Consensus 105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~NIli~~~~~~kl~Dfg 183 (322)
T 1p4o_A 105 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFG 183 (322)
T ss_dssp EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTT
T ss_pred EEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-CccCCCccceEEEcCCCeEEECcCc
Confidence 9999999999999986421 246799999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccC
Q 010932 207 LMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLE 279 (497)
Q Consensus 207 la~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (497)
+++..... ....+|+.|+|||++.+..++.++|||||||++|+|++ |..|+........... +.....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~-----~~~~~~ 258 (322)
T 1p4o_A 184 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF-----VMEGGL 258 (322)
T ss_dssp CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHH-----HHTTCC
T ss_pred cccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHH-----HHcCCc
Confidence 98754322 23345788999999999999999999999999999999 7776654332221111 111111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 280 GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 280 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
...+..++..+.+|+.+||+.||.+|||+.+++++|+.+..
T Consensus 259 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 259 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 23345567789999999999999999999999999988765
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=344.26 Aligned_cols=254 Identities=19% Similarity=0.292 Sum_probs=198.9
Q ss_pred CcccccccCCCCCCcEEEEEEEc----CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCC----
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK----NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGD---- 131 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---- 131 (497)
+.+.+.+.||+|+||+||+|.+. ++..||||+++...... .+.+.+|+.++++++||||+++++++....
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 113 (313)
T 3brb_A 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI 113 (313)
T ss_dssp GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------
T ss_pred HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCC
Confidence 45677888999999999999864 24589999997653322 357899999999999999999999997754
Q ss_pred -ceEEEEEcCCCCChhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccC
Q 010932 132 -ERLLVAQYMPNDTLSKHLFHW----DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFG 206 (497)
Q Consensus 132 -~~~lv~e~~~~~~L~~~l~~~----~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg 206 (497)
..++||||+++++|.+++... ....+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||
T Consensus 114 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kl~Dfg 192 (313)
T 3brb_A 114 PKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-FLHRDLAARNCMLRDDMTVCVADFG 192 (313)
T ss_dssp -CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCSGGGEEECTTSCEEECSCS
T ss_pred cccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEEeecC
Confidence 359999999999999998431 2467999999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccC
Q 010932 207 LMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLE 279 (497)
Q Consensus 207 la~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (497)
+++..... ....+++.|+|||.+.+..++.++|||||||++|+|++ |..|+.......... .+.....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~-----~~~~~~~ 267 (313)
T 3brb_A 193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYD-----YLLHGHR 267 (313)
T ss_dssp CC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH-----HHHTTCC
T ss_pred cceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHH-----HHHcCCC
Confidence 99764332 23456788999999999999999999999999999999 776665432221111 1111112
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 280 GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 280 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
...+..++..+.+|+.+||+.||.+|||+.+++++|+.+...
T Consensus 268 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 268 LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 234455677899999999999999999999999999998754
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=352.39 Aligned_cols=240 Identities=18% Similarity=0.249 Sum_probs=180.8
Q ss_pred ccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCC-CCcceeeeeeeeeCCceEEEEEcCCCCCh
Q 010932 68 SESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDERLLVAQYMPNDTL 145 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L 145 (497)
+.||+|+||+||+|.++ +|+.||||++... ....+.+|+.+++.+. ||||+++++++.+....++||||+++++|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 67899999999999986 4899999999643 3467889999999997 99999999999999999999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC---CeeEcccCCccccCCC----Cccc
Q 010932 146 SKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG---DPRLSSFGLMKNSRDG----KSYS 218 (497)
Q Consensus 146 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~---~~kl~Dfgla~~~~~~----~~~~ 218 (497)
.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++ .+||+|||+++..... ....
T Consensus 94 ~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 170 (325)
T 3kn6_A 94 FERIKK--KKHFSETEASYIMRKLVSAVSHMHDVG-VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC 170 (325)
T ss_dssp HHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccC
Confidence 999976 568999999999999999999999999 99999999999998665 7999999999865433 3456
Q ss_pred cCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCC--CCC----HHHHHHHHH
Q 010932 219 TNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEG--QYA----NEDATQLVE 292 (497)
Q Consensus 219 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~l~~ 292 (497)
+|+.|+|||++.+..++.++|||||||++|+|++|+.||......... ............. .++ ...++.+.+
T Consensus 171 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 249 (325)
T 3kn6_A 171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC-TSAVEIMKKIKKGDFSFEGEAWKNVSQEAKD 249 (325)
T ss_dssp -------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------C-CCHHHHHHHHTTTCCCCCSHHHHTSCHHHHH
T ss_pred CCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccccc-ccHHHHHHHHHcCCCCCCcccccCCCHHHHH
Confidence 799999999999999999999999999999999999988654221110 0001111111111 111 235778999
Q ss_pred HHHHhcccCCCCCCCHHHHHHH
Q 010932 293 LASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~ 314 (497)
|+.+||+.||.+|||+.+++++
T Consensus 250 li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 250 LIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHHHHCCCTTTCCCTTTSTTC
T ss_pred HHHHHCCCChhHCCCHHHHhcC
Confidence 9999999999999999999875
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=340.32 Aligned_cols=246 Identities=18% Similarity=0.245 Sum_probs=208.3
Q ss_pred CCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCC---CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQ---SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
..+.+.+++.||+|+||.||+|... ++..||||++... .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 91 (284)
T 2vgo_A 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYL 91 (284)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEE
Confidence 4467788899999999999999986 4889999998643 12235679999999999999999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG- 214 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 214 (497)
||||+++++|.+++.. .+.+++..+..++.||+.||.|||+++ ++|+||||+||+++.++.+||+|||++......
T Consensus 92 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 92 MLEFAPRGELYKELQK--HGRFDEQRSATFMEELADALHYCHERK-VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp EECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred EEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 9999999999999975 457999999999999999999999999 999999999999999999999999998754432
Q ss_pred -CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHH
Q 010932 215 -KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVEL 293 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 293 (497)
....||+.|+|||++.+..++.++||||||+++|+|++|..||........... +... ...++...+..+.+|
T Consensus 169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~l 242 (284)
T 2vgo_A 169 RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR----IVNV--DLKFPPFLSDGSKDL 242 (284)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HHTT--CCCCCTTSCHHHHHH
T ss_pred cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHH----Hhcc--ccCCCCcCCHHHHHH
Confidence 345789999999999998999999999999999999999998865432222111 1111 123445567789999
Q ss_pred HHHhcccCCCCCCCHHHHHHH
Q 010932 294 ASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 294 i~~cl~~dp~~Rps~~~ll~~ 314 (497)
+.+||+.||.+|||+.+++++
T Consensus 243 i~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 243 ISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp HHHHSCSSGGGSCCHHHHHTC
T ss_pred HHHHhhcCHhhCCCHHHHhhC
Confidence 999999999999999999985
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=338.50 Aligned_cols=247 Identities=17% Similarity=0.192 Sum_probs=199.7
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC-CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
.+.+.+.||+|+||+||++..+ +|..||+|++.... ....+.+.+|+++|+.++||||+++++++.+....++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 102 (285)
T 3is5_A 23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETC 102 (285)
T ss_dssp HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeC
Confidence 4677888999999999999976 48999999987643 334678999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEe---CCCCCeeEcccCCccccCCC-
Q 010932 141 PNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF---DEDGDPRLSSFGLMKNSRDG- 214 (497)
Q Consensus 141 ~~~~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~- 214 (497)
++++|.+++... ....+++..+..++.||+.||.|||+++ ++||||||+|||+ +.++.+||+|||++......
T Consensus 103 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 103 EGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH-VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp SCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred CCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 999999988542 2467999999999999999999999999 9999999999999 45688999999999764432
Q ss_pred --CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 215 --KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 215 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
....+|+.|+|||++. +.++.++|||||||++|+|++|+.||............... ..... ......++.+.+
T Consensus 182 ~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~ 257 (285)
T 3is5_A 182 HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYK--EPNYA-VECRPLTPQAVD 257 (285)
T ss_dssp -----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCC-C--CCCCHHHHH
T ss_pred cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccC--Ccccc-cccCcCCHHHHH
Confidence 3456899999999986 57899999999999999999999998765433322211110 01010 011124567899
Q ss_pred HHHHhcccCCCCCCCHHHHHHH
Q 010932 293 LASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~ 314 (497)
|+.+||+.||++|||+.+++++
T Consensus 258 li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 258 LLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp HHHHHTCSCTTTSCCHHHHHTS
T ss_pred HHHHHccCChhhCcCHHHHhcC
Confidence 9999999999999999999975
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-44 Score=350.99 Aligned_cols=246 Identities=20% Similarity=0.240 Sum_probs=199.6
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEEEc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
+.|.+++.||+|+||+||++.++ +|+.||||++..... .+.+|+++|.++ +||||+++++++.+....++||||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 97 (342)
T 2qr7_A 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97 (342)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence 35678889999999999999986 489999999976542 245788888887 799999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC----CCeeEcccCCccccCCC-
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED----GDPRLSSFGLMKNSRDG- 214 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~----~~~kl~Dfgla~~~~~~- 214 (497)
++||+|.+++.. .+.+++..+..++.||+.||.|||++| ++||||||+|||+... +.+||+|||+++.....
T Consensus 98 ~~gg~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~g-ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~ 174 (342)
T 2qr7_A 98 MKGGELLDKILR--QKFFSEREASAVLFTITKTVEYLHAQG-VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174 (342)
T ss_dssp CCSCBHHHHHHT--CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence 999999999865 567999999999999999999999999 9999999999998533 35999999999864332
Q ss_pred ---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccccc--ccccCCCCCHHHHHH
Q 010932 215 ---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLM--DSSLEGQYANEDATQ 289 (497)
Q Consensus 215 ---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 289 (497)
....||+.|+|||++.+..++.++|||||||++|+|++|..||......... .....+. ........+...+..
T Consensus 175 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~ 253 (342)
T 2qr7_A 175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPE-EILARIGSGKFSLSGGYWNSVSDT 253 (342)
T ss_dssp CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHH-HHHHHHHHCCCCCCSTTTTTSCHH
T ss_pred CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHH-HHHHHHccCCcccCccccccCCHH
Confidence 3457899999999999888999999999999999999999988642110000 0000000 011112233456788
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHh
Q 010932 290 LVELASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 290 l~~li~~cl~~dp~~Rps~~~ll~~l 315 (497)
+.+|+.+||+.||++|||+.+++++-
T Consensus 254 ~~~li~~~L~~dP~~R~t~~~il~hp 279 (342)
T 2qr7_A 254 AKDLVSKMLHVDPHQRLTAALVLRHP 279 (342)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred HHHHHHHHCCCChhHCcCHHHHhcCC
Confidence 99999999999999999999999863
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-44 Score=353.05 Aligned_cols=256 Identities=18% Similarity=0.265 Sum_probs=209.1
Q ss_pred CCcccccccCCCCCCcEEEEEEEcC-C-----cEEEEEEccCCCCC-ChhHHHHHHHHhccC-CCCcceeeeeeeeeCCc
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKN-N-----RLVAIKRFSRQSWP-DPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDE 132 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~-~-----~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 132 (497)
.+.+.+.+.||+|+||+||+|.+.. + ..||||++...... ..+.+.+|+.+++.+ +||||+++++++...+.
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 4567888889999999999999753 3 47999999765322 246789999999999 89999999999999999
Q ss_pred eEEEEEcCCCCChhhhhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCe
Q 010932 133 RLLVAQYMPNDTLSKHLFHWD------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDP 200 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~ 200 (497)
.++||||+++|+|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~ 203 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN-CIHRDVAARNVLLTNGHVA 203 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGCEEEGGGEE
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCcccceEEECCCCeE
Confidence 999999999999999986431 346899999999999999999999999 9999999999999999999
Q ss_pred eEcccCCccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccc
Q 010932 201 RLSSFGLMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLL 273 (497)
Q Consensus 201 kl~Dfgla~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~ 273 (497)
||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|+|+| |..||........ ....
T Consensus 204 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~----~~~~ 279 (333)
T 2i1m_A 204 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK----FYKL 279 (333)
T ss_dssp EBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH----HHHH
T ss_pred EECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH----HHHH
Confidence 99999999854322 23445778999999999999999999999999999999 7777754321111 1111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 274 MDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 274 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
.........+...+..+.+|+.+||+.||.+|||+.++++.|+.+...
T Consensus 280 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 280 VKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 112222233445567899999999999999999999999999887643
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=346.56 Aligned_cols=253 Identities=18% Similarity=0.266 Sum_probs=199.1
Q ss_pred cccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccC--CCCcceeeeeeeeeC----CceEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNV--RHKRLVNLIGCCAEG----DERLLV 136 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~~~~----~~~~lv 136 (497)
.+.+++.||+|+||.||+|.+. |+.||||++... ....+.+|.+++..+ +||||+++++++... ...++|
T Consensus 38 ~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 113 (337)
T 3mdy_A 38 QIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLI 113 (337)
T ss_dssp HCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEE
T ss_pred ceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEE
Confidence 5678888999999999999985 899999998643 234556666666555 899999999999887 678999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC--------CCcccccCCCcceEeCCCCCeeEcccCCc
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQ--------NRKLYHDLNAYRVLFDEDGDPRLSSFGLM 208 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~--------~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 208 (497)
|||+++++|.+++.. ..+++..+..++.|++.||.|||+. + ++||||||+|||++.++.+||+|||++
T Consensus 114 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kl~Dfg~a 189 (337)
T 3mdy_A 114 TDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA 189 (337)
T ss_dssp ECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-EEecccchHHEEECCCCCEEEEeCCCc
Confidence 999999999999964 4799999999999999999999998 8 999999999999999999999999999
Q ss_pred cccCCC--------CccccCCCCCCccccccCCCCcc------cceeehhhhHHHHhhC----------CCCCCchhhHH
Q 010932 209 KNSRDG--------KSYSTNLAYTPPEFLRTGRVIPE------SVIYSYGTVLLDLLSG----------KHIPPSHALDV 264 (497)
Q Consensus 209 ~~~~~~--------~~~~gt~~y~aPE~~~~~~~~~~------~Dv~slG~~l~elltg----------~~~~~~~~~~~ 264 (497)
+..... ....||+.|+|||++.+...+.+ +|||||||++|||+|| ..|+.......
T Consensus 190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 269 (337)
T 3mdy_A 190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD 269 (337)
T ss_dssp EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC
Confidence 754332 23478999999999987766665 9999999999999999 44442211000
Q ss_pred Hhcccccc-ccccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcccc
Q 010932 265 IRGKNLLL-LMDSSLEGQYA-----NEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323 (497)
Q Consensus 265 ~~~~~~~~-~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~ 323 (497)
........ ..........+ ..++..+.+|+.+||+.||.+|||+.+|+++|+.+.....
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 270 PSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred CchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 00000000 01111122222 3678889999999999999999999999999999876543
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-44 Score=352.98 Aligned_cols=251 Identities=18% Similarity=0.238 Sum_probs=204.4
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
..+.+++.||+|+||+||++.+. +|..||+|++...... ..+.+.+|+.+|+.++||||+++++++...+..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 46788899999999999999986 5899999999765322 246789999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCcccccCCCcceEeCCCCCeeEcccCCccccC--CCCc
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQ-NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR--DGKS 216 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~--~~~~ 216 (497)
+++++|.+++.. .+.+++..+..++.+++.||.|||+. + ++||||||+|||++.++.+||+|||++.... ....
T Consensus 113 ~~~~~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 189 (360)
T 3eqc_A 113 MDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 189 (360)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEcCCccHHHEEECCCCCEEEEECCCCcccccccccC
Confidence 999999999975 45799999999999999999999996 7 9999999999999999999999999986432 2344
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccc---------------------------
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKN--------------------------- 269 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~--------------------------- 269 (497)
..||+.|+|||++.+..++.++|||||||++|+|++|+.||............
T Consensus 190 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (360)
T 3eqc_A 190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGM 269 (360)
T ss_dssp -CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------------
T ss_pred CCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccccc
Confidence 67899999999999999999999999999999999999988654322211000
Q ss_pred -------c----ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010932 270 -------L----LLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 270 -------~----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l 315 (497)
. ............+...+..+.+|+.+||+.||++|||+.+++++-
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 326 (360)
T 3eqc_A 270 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 326 (360)
T ss_dssp ----CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred CCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence 0 000000001111223567899999999999999999999999863
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-44 Score=357.69 Aligned_cols=247 Identities=20% Similarity=0.275 Sum_probs=189.8
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCC-CCcceeeeeeeeeCC--ceEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVR-HKRLVNLIGCCAEGD--ERLL 135 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~--~~~l 135 (497)
..|.+++.||+|+||+||+|.+. +|+.||||++...... ..+.+.+|+.+|..+. ||||+++++++...+ ..++
T Consensus 9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~l 88 (388)
T 3oz6_A 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL 88 (388)
T ss_dssp TTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEE
T ss_pred CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEE
Confidence 46788899999999999999975 5999999998654222 2456889999999997 999999999997644 6899
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC--
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD-- 213 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 213 (497)
||||++ ++|..++.. ..+++..+..++.||+.||.|||+.| |+||||||+|||++.++.+||+|||+++....
T Consensus 89 v~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 89 VFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGG-LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp EEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred EecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 999997 589988864 57999999999999999999999999 99999999999999999999999999975422
Q ss_pred -----------------------CCccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccc
Q 010932 214 -----------------------GKSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKN 269 (497)
Q Consensus 214 -----------------------~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~ 269 (497)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||++..........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i 243 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI 243 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 123578999999999986 67899999999999999999999988764322111100
Q ss_pred cccccc------------------------------cccCC------------CCCHHHHHHHHHHHHHhcccCCCCCCC
Q 010932 270 LLLLMD------------------------------SSLEG------------QYANEDATQLVELASKCLQYEAKDRPD 307 (497)
Q Consensus 270 ~~~~~~------------------------------~~~~~------------~~~~~~~~~l~~li~~cl~~dp~~Rps 307 (497)
+ ..+. ..... ..+...++.+.+|+.+||+.||++|||
T Consensus 244 ~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t 322 (388)
T 3oz6_A 244 I-GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRIS 322 (388)
T ss_dssp H-HHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCC
T ss_pred H-HhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCC
Confidence 0 0000 00000 001134567999999999999999999
Q ss_pred HHHHHHH
Q 010932 308 VKFLLSA 314 (497)
Q Consensus 308 ~~~ll~~ 314 (497)
+.++++|
T Consensus 323 ~~e~l~H 329 (388)
T 3oz6_A 323 ANDALKH 329 (388)
T ss_dssp HHHHTTS
T ss_pred HHHHhCC
Confidence 9999987
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=338.57 Aligned_cols=248 Identities=16% Similarity=0.167 Sum_probs=188.2
Q ss_pred cCCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC---CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceE
Q 010932 59 NGFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 59 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 134 (497)
..+..+.+++.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 8 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 87 (278)
T 3cok_A 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVY 87 (278)
T ss_dssp SSGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEE
T ss_pred cccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEE
Confidence 34567888899999999999999974 59999999986431 223567999999999999999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
+||||+++++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++......
T Consensus 88 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 88 LVLEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSHG-ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEEECCTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEEecCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 99999999999999865 2467999999999999999999999999 999999999999999999999999999865422
Q ss_pred ----CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHH
Q 010932 215 ----KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290 (497)
Q Consensus 215 ----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (497)
....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.......... ..... ....+...+..+
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~ 239 (278)
T 3cok_A 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN----KVVLA--DYEMPSFLSIEA 239 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------CCSS--CCCCCTTSCHHH
T ss_pred CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH----HHhhc--ccCCccccCHHH
Confidence 24568999999999998889999999999999999999998875432111111 11111 112344567789
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHH
Q 010932 291 VELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 291 ~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+|+.+||+.||++|||+.+++++
T Consensus 240 ~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 240 KDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHcccCHhhCCCHHHHhcC
Confidence 999999999999999999999985
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=339.85 Aligned_cols=252 Identities=20% Similarity=0.272 Sum_probs=205.3
Q ss_pred CcccccccCCCCCCcEEEEEEEcC----CcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN----NRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
+.+.+.+.||+|+||+||+|.+.+ +..||||++..... ...+.+.+|+.+++.++||||+++++++.+ +..++|
T Consensus 12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v 90 (281)
T 3cc6_A 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWII 90 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEE
T ss_pred cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEE
Confidence 456778889999999999998643 34699999976532 235679999999999999999999999865 457899
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 214 (497)
|||+++++|.+++... ...+++..+..++.||+.||.|||+++ ++|+||||+|||++.++.+||+|||++......
T Consensus 91 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 168 (281)
T 3cc6_A 91 MELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 168 (281)
T ss_dssp EECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEEETTEEEECCCCGGGCC-----
T ss_pred EecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEECCCCcEEeCccCCCcccccccc
Confidence 9999999999999652 456999999999999999999999999 999999999999999999999999999865432
Q ss_pred ---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHH
Q 010932 215 ---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290 (497)
Q Consensus 215 ---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (497)
....+|+.|+|||++.+..++.++|||||||++|+|+| |+.||......... ..+........+..+++.+
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l 243 (281)
T 3cc6_A 169 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI-----GVLEKGDRLPKPDLCPPVL 243 (281)
T ss_dssp ----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHH-----HHHHHTCCCCCCTTCCHHH
T ss_pred cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHH-----HHHhcCCCCCCCCCCCHHH
Confidence 23345778999999998999999999999999999998 99887543222111 1111111223344567789
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 291 VELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 291 ~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
.+++.+||+.||++|||+.+++++|+.+...
T Consensus 244 ~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 244 YTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999988643
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-44 Score=348.85 Aligned_cols=250 Identities=19% Similarity=0.297 Sum_probs=196.2
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC-hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
+.|.+++.||+|+||+||+|... +|+.||||++....... ...+.+|+.+|+.++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 56788999999999999999986 58999999997543222 23466899999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----C
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----K 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 215 (497)
++ ++|.+++... ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~ 158 (324)
T 3mtl_A 82 LD-KDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYD 158 (324)
T ss_dssp CS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCCGGGEEECTTCCEEECSSSEEECC--------
T ss_pred cc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCcCHHHEEECCCCCEEEccCcccccccCCccccc
Confidence 97 5888888653 557999999999999999999999999 999999999999999999999999998754432 2
Q ss_pred ccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccc-------cccc-----------
Q 010932 216 SYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLL-------LMDS----------- 276 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~-------~~~~----------- 276 (497)
...+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||............... ....
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (324)
T 3mtl_A 159 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYN 238 (324)
T ss_dssp ----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTC
T ss_pred cccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccc
Confidence 3467999999999976 56899999999999999999999988765322211110000 0000
Q ss_pred --ccC----CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 277 --SLE----GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 277 --~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
... ....+..+..+.+|+.+||+.||++|||+.+++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 239 YPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp CCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000 00112346778999999999999999999999985
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-44 Score=349.21 Aligned_cols=251 Identities=20% Similarity=0.303 Sum_probs=200.9
Q ss_pred CCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
++.|.+++.||+|+||.||+|.+.. |+.||||++....... .+.+.+|+.+++.++||||+++++++......++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 4578888999999999999999865 9999999987554322 346889999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 214 (497)
||+++++|..++.. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 104 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 180 (331)
T 4aaa_A 104 EFVDHTILDDLELF--PNGLDYQVVQKYLFQIINGIGFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV 180 (331)
T ss_dssp ECCSEEHHHHHHHS--TTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred ecCCcchHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHHCC-EEccCcChheEEEcCCCcEEEEeCCCceeecCCccc
Confidence 99999999887654 567999999999999999999999999 999999999999999999999999999764332
Q ss_pred -CccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccc--------------------cc
Q 010932 215 -KSYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNL--------------------LL 272 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~--------------------~~ 272 (497)
....+|+.|+|||++.+. .++.++|||||||++|+|++|+.||............. ..
T Consensus 181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (331)
T 4aaa_A 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG 260 (331)
T ss_dssp ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTT
T ss_pred cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccccc
Confidence 345689999999999875 68999999999999999999999886543221110000 00
Q ss_pred ccccccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 273 LMDSSLEGQY-----ANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 273 ~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
...+...... .+..++.+.+|+.+||+.||++|||+.+++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp CCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000001111 12356789999999999999999999999985
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-44 Score=351.38 Aligned_cols=247 Identities=19% Similarity=0.154 Sum_probs=197.8
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCC-----CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQ-----SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
.+.+++.||+|+||+||+|... ++..||||++... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 27 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 106 (345)
T 3hko_A 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLV 106 (345)
T ss_dssp HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred heeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEE
Confidence 4577888899999999999975 4889999998643 233457899999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCC--------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHc
Q 010932 137 AQYMPNDTLSKHLFHWD--------------------------------------KQPLPWEMRVRVAYYIAQALDHCNS 178 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~--------------------------------------~~~l~~~~~~~i~~~i~~~L~~lh~ 178 (497)
|||+++++|.+++.... ...+++..+..++.||+.||.|||+
T Consensus 107 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~ 186 (345)
T 3hko_A 107 MELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN 186 (345)
T ss_dssp EECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999884210 1124677888999999999999999
Q ss_pred CCCcccccCCCcceEeCCCC--CeeEcccCCccccCC--------CCccccCCCCCCcccccc--CCCCcccceeehhhh
Q 010932 179 QNRKLYHDLNAYRVLFDEDG--DPRLSSFGLMKNSRD--------GKSYSTNLAYTPPEFLRT--GRVIPESVIYSYGTV 246 (497)
Q Consensus 179 ~~~iiH~Dlkp~Nill~~~~--~~kl~Dfgla~~~~~--------~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~ 246 (497)
.+ ++||||||+|||++.++ .+||+|||+++.... .....||+.|+|||++.+ ..++.++|||||||+
T Consensus 187 ~~-ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~i 265 (345)
T 3hko_A 187 QG-ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265 (345)
T ss_dssp TT-EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHH
T ss_pred CC-ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHH
Confidence 99 99999999999998776 899999999975322 134568999999999975 678999999999999
Q ss_pred HHHHhhCCCCCCchhhHHHhccccccccccccC--CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 247 LLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLE--GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 247 l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+|+|++|+.||........... +...... .......++.+.+|+.+||+.||.+|||+.+++++
T Consensus 266 l~el~~g~~pf~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 266 LHLLLMGAVPFPGVNDADTISQ----VLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHH----HHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred HHHHHHCCCCCCCCChHHHHHH----HHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 9999999998865433222111 1111111 11122356789999999999999999999999985
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=349.81 Aligned_cols=248 Identities=19% Similarity=0.217 Sum_probs=195.7
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCC------c
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGD------E 132 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~ 132 (497)
..|.+++.||+|+||+||+|.+. +|+.||||++....... .+.+.+|+.+|+.++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 45788889999999999999985 59999999996543222 457889999999999999999999997653 4
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
.++||||+ +++|.+++.. ..+++..+..++.||+.||.|||+.| ++||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp CEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 69999999 8899999864 57999999999999999999999999 9999999999999999999999999998654
Q ss_pred CC-CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccc-------c------------
Q 010932 213 DG-KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNL-------L------------ 271 (497)
Q Consensus 213 ~~-~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~-------~------------ 271 (497)
.. ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+........... .
T Consensus 180 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~ 259 (367)
T 1cm8_A 180 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 259 (367)
T ss_dssp SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred cccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHH
Confidence 43 45678999999999987 679999999999999999999999887543211100000 0
Q ss_pred ---cccc---cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 272 ---LLMD---SSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 272 ---~~~~---~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..+. ...........++.+.+|+.+||+.||++|||+.+++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 260 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 0000 000111223456789999999999999999999999986
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-44 Score=354.18 Aligned_cols=254 Identities=14% Similarity=0.145 Sum_probs=204.5
Q ss_pred CcccccccCCCCCCcEEEEEEEcC---------CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCccee----------
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN---------NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVN---------- 122 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~---------- 122 (497)
..|.+++.||+|+||.||+|.+.. ++.||||++... +.+.+|+.++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 467888999999999999999763 789999999754 46899999999999999998
Q ss_pred -----eeeeeee-CCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC
Q 010932 123 -----LIGCCAE-GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE 196 (497)
Q Consensus 123 -----~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~ 196 (497)
+++++.. ....++||||+ +++|.+++.......+++..+..++.||+.||.|||+++ ++||||||+|||++.
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE-YVHGNVTAENIFVDP 194 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCGGGEEEET
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEEcC
Confidence 5667766 67889999999 999999997644578999999999999999999999999 999999999999999
Q ss_pred CC--CeeEcccCCccccCCC-----------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchh--
Q 010932 197 DG--DPRLSSFGLMKNSRDG-----------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA-- 261 (497)
Q Consensus 197 ~~--~~kl~Dfgla~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~-- 261 (497)
++ .+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|+|++|+.||....
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 274 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN 274 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence 98 8999999999754321 23478999999999999899999999999999999999999886542
Q ss_pred hHHHhccccccccc--cccCC--CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcccc
Q 010932 262 LDVIRGKNLLLLMD--SSLEG--QYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323 (497)
Q Consensus 262 ~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~ 323 (497)
...+... ...... ..... ......+..+.+|+.+||+.||++|||+.+|++.|+.+.....
T Consensus 275 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 275 TEDIMKQ-KQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp HHHHHHH-HHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHH-HHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 1111100 000000 00000 0012346789999999999999999999999999999876544
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=338.88 Aligned_cols=249 Identities=18% Similarity=0.185 Sum_probs=202.3
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
..+.....||+|+||.||+|.+. +++.||||++........+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 33444456799999999999975 58899999998766555678999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC-CCCeeEcccCCccccCCC----
Q 010932 141 PNDTLSKHLFHWD-KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE-DGDPRLSSFGLMKNSRDG---- 214 (497)
Q Consensus 141 ~~~~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~~~~~~---- 214 (497)
++++|.+++.... ...+++..+..++.||+.||.|||+++ ++|+||||+|||++. ++.+||+|||++......
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~ 180 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT 180 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC-EEccCCChhhEEEECCCCCEEEeecccccccCCCCCcc
Confidence 9999999997642 235779999999999999999999999 999999999999987 899999999999765432
Q ss_pred CccccCCCCCCccccccCC--CCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 215 KSYSTNLAYTPPEFLRTGR--VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
....||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.......... ............+...+..+.+
T Consensus 181 ~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 257 (295)
T 2clq_A 181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM---FKVGMFKVHPEIPESMSAEAKA 257 (295)
T ss_dssp CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHH---HHHHHHCCCCCCCTTSCHHHHH
T ss_pred cccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHH---HhhccccccccccccCCHHHHH
Confidence 3456899999999997654 7899999999999999999998875432111100 0000111223445567788999
Q ss_pred HHHHhcccCCCCCCCHHHHHHH
Q 010932 293 LASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~ 314 (497)
|+.+||+.||++|||+.+++++
T Consensus 258 li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 258 FILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp HHHHTTCSSTTTSCCHHHHHTS
T ss_pred HHHHHccCChhhCCCHHHHhcC
Confidence 9999999999999999999975
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-44 Score=348.09 Aligned_cols=257 Identities=18% Similarity=0.262 Sum_probs=208.4
Q ss_pred CCCcccccccCCCCCCcEEEEEEE------cCCcEEEEEEccCCCCC-ChhHHHHHHHHhccC-CCCcceeeeeeeeeCC
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRL------KNNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGD 131 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 131 (497)
..+.+.+++.||+|+||+||+|.+ .+++.||||++...... ..+.+.+|+.++.++ +||||+++++++...+
T Consensus 25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 104 (316)
T 2xir_A 25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 104 (316)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCC
Confidence 345678888999999999999985 24689999999765322 235789999999999 7999999999987754
Q ss_pred -ceEEEEEcCCCCChhhhhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC
Q 010932 132 -ERLLVAQYMPNDTLSKHLFHWDK--------------QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE 196 (497)
Q Consensus 132 -~~~lv~e~~~~~~L~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~ 196 (497)
..++||||+++++|.+++..... ..+++..+..++.||+.||.|||+.+ ++||||||+|||++.
T Consensus 105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~ 183 (316)
T 2xir_A 105 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSE 183 (316)
T ss_dssp SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECG
T ss_pred CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECC
Confidence 58999999999999999976322 12899999999999999999999999 999999999999999
Q ss_pred CCCeeEcccCCccccCCCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccc
Q 010932 197 DGDPRLSSFGLMKNSRDGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKN 269 (497)
Q Consensus 197 ~~~~kl~Dfgla~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~ 269 (497)
++.+||+|||+++...... ...+|+.|+|||++.+..++.++|||||||++|+|+| |..||........
T Consensus 184 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~---- 259 (316)
T 2xir_A 184 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---- 259 (316)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH----
T ss_pred CCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH----
Confidence 9999999999998654332 3456788999999999999999999999999999998 8887754321111
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 270 LLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
....+........+...++.+.+++.+||+.||.+|||+.+++++|+.+.+.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 260 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 1111111112233445677899999999999999999999999999988643
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-44 Score=348.06 Aligned_cols=257 Identities=19% Similarity=0.297 Sum_probs=207.0
Q ss_pred CcccccccCCCCCCcEEEEEEEc------CCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK------NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 134 (497)
..+.+++.||+|+||.||+|.+. ++..||||++..... .....+.+|+.++++++||||+++++++......+
T Consensus 30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (327)
T 2yfx_A 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 109 (327)
T ss_dssp GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcE
Confidence 45678889999999999999842 477999999975432 22457899999999999999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCCC-----CCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC---CCCeeEcccC
Q 010932 135 LVAQYMPNDTLSKHLFHWDK-----QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE---DGDPRLSSFG 206 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~-----~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfg 206 (497)
+||||+++++|.+++..... ..+++..++.++.||+.||.|||+.+ ++||||||+|||++. +..+||+|||
T Consensus 110 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-i~H~dlkp~NIli~~~~~~~~~kl~Dfg 188 (327)
T 2yfx_A 110 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFG 188 (327)
T ss_dssp EEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eecCcCCHhHEEEecCCCcceEEECccc
Confidence 99999999999999976422 45899999999999999999999999 999999999999984 4569999999
Q ss_pred CccccC------CCCccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccC
Q 010932 207 LMKNSR------DGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLE 279 (497)
Q Consensus 207 la~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (497)
+++... ......+|+.|+|||++.+..++.++|||||||++|+|+| |..||.......... .+.....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~-----~~~~~~~ 263 (327)
T 2yfx_A 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-----FVTSGGR 263 (327)
T ss_dssp HHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH-----HHHTTCC
T ss_pred cccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHH-----HHhcCCC
Confidence 987432 1233456889999999998999999999999999999998 877775443222111 1111112
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhccccc
Q 010932 280 GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEV 324 (497)
Q Consensus 280 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~~ 324 (497)
...+..++..+.+|+.+||+.||.+|||+.+++++|+.+......
T Consensus 264 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~~ 308 (327)
T 2yfx_A 264 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 308 (327)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHH
T ss_pred CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHHH
Confidence 233455677899999999999999999999999999988765543
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=375.87 Aligned_cols=246 Identities=18% Similarity=0.223 Sum_probs=209.7
Q ss_pred CCCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCC---CCCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQ---SWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 134 (497)
..+++.+++.||+|+||+||++.++. ++.||||+++.. .....+.+..|..+|..+ +||||+.+++++.+.+..+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 45678899999999999999999764 889999998743 233456788999999988 7999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC-
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD- 213 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~- 213 (497)
|||||++||+|..++.. .+.+++..++.++.||+.||.|||+++ |+||||||+||||+.+|.+||+|||+++....
T Consensus 419 lV~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTS-EECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred EEEeCcCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 99999999999999976 467999999999999999999999999 99999999999999999999999999985322
Q ss_pred ---CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHH
Q 010932 214 ---GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290 (497)
Q Consensus 214 ---~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (497)
.....||+.|+|||++.+..++.++|||||||+||||++|+.||.......+... ++.. ...+|...+.++
T Consensus 496 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~s~~~ 569 (674)
T 3pfq_A 496 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS----IMEH--NVAYPKSMSKEA 569 (674)
T ss_dssp TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHSS--CCCCCTTSCHHH
T ss_pred CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHH----HHhC--CCCCCccCCHHH
Confidence 2356799999999999999999999999999999999999999876543332222 1111 123556678889
Q ss_pred HHHHHHhcccCCCCCCCH-----HHHHHH
Q 010932 291 VELASKCLQYEAKDRPDV-----KFLLSA 314 (497)
Q Consensus 291 ~~li~~cl~~dp~~Rps~-----~~ll~~ 314 (497)
.+||.+||+.||++||++ ++|+++
T Consensus 570 ~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 570 VAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp HHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred HHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 999999999999999987 777764
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-43 Score=362.63 Aligned_cols=246 Identities=19% Similarity=0.177 Sum_probs=199.9
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC--CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS--WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
.|.+++.||+|+||+||+|.++ ++..||||++.... ......+.+|+.+|+.++||||+++++++.+....++||||
T Consensus 38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 117 (494)
T 3lij_A 38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMEC 117 (494)
T ss_dssp HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 4788899999999999999986 58999999997643 23357899999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC---CCCeeEcccCCccccCCC--
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE---DGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~~~-- 214 (497)
+++|+|.+.+.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 118 ~~~g~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~ 194 (494)
T 3lij_A 118 YKGGELFDEIIH--RMKFNEVDAAVIIKQVLSGVTYLHKHN-IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK 194 (494)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc
Confidence 999999998865 467999999999999999999999999 999999999999975 455999999999865433
Q ss_pred -CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHH
Q 010932 215 -KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVEL 293 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 293 (497)
....||+.|+|||++. +.++.++|||||||++|+|++|..||.......+......... ..........++.+.+|
T Consensus 195 ~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~l 271 (494)
T 3lij_A 195 MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKY--TFDSPEWKNVSEGAKDL 271 (494)
T ss_dssp BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCSGGGTTSCHHHHHH
T ss_pred ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCchhcccCCHHHHHH
Confidence 3457899999999986 5799999999999999999999999876543322211111000 00111112456789999
Q ss_pred HHHhcccCCCCCCCHHHHHHH
Q 010932 294 ASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 294 i~~cl~~dp~~Rps~~~ll~~ 314 (497)
+.+||+.||.+|||+.+++++
T Consensus 272 i~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 272 IKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp HHHHTCSSTTTSCCHHHHHTC
T ss_pred HHHHCCCChhhCccHHHHhcC
Confidence 999999999999999999986
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-43 Score=362.44 Aligned_cols=246 Identities=17% Similarity=0.178 Sum_probs=204.1
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCC--CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQ--SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
.|.+++.||+|+||+||+|.++ +|+.||||++... .......+.+|+.+|++++||||+++++++.+....++||||
T Consensus 23 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 102 (486)
T 3mwu_A 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL 102 (486)
T ss_dssp HEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred ceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEc
Confidence 5788899999999999999986 5999999998642 233467899999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC---CCCCeeEcccCCccccCCC--
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD---EDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfgla~~~~~~-- 214 (497)
+++++|.+.+.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 103 ~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 179 (486)
T 3mwu_A 103 YTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179 (486)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--
T ss_pred CCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCc
Confidence 999999998865 467999999999999999999999999 99999999999995 4567999999999865443
Q ss_pred -CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHH
Q 010932 215 -KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVEL 293 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 293 (497)
....||+.|+|||++.+ .++.++|||||||++|+|++|+.||................. ....+.....++.+.+|
T Consensus 180 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~l 256 (486)
T 3mwu_A 180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKY--AFDLPQWRTISDDAKDL 256 (486)
T ss_dssp --CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CSCSGGGGGSCHHHHHH
T ss_pred cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCCcccCCCCHHHHHH
Confidence 34578999999999975 699999999999999999999999876533322111110000 01111123467789999
Q ss_pred HHHhcccCCCCCCCHHHHHHH
Q 010932 294 ASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 294 i~~cl~~dp~~Rps~~~ll~~ 314 (497)
|.+||+.||.+|||+.+++++
T Consensus 257 i~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 257 IRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp HHHHTCSSTTTSCCHHHHHHC
T ss_pred HHHHcCCChhhCcCHHHHhcC
Confidence 999999999999999999986
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=356.20 Aligned_cols=259 Identities=17% Similarity=0.190 Sum_probs=209.2
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCC-CCChhHHHHHHHHhccCCCCcceeeeeeeeeCC--ceEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD--ERLLVA 137 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv~ 137 (497)
..|.+.+.||+|+||+||+|.+.. |+.||||++.... ....+.+.+|+++|++++||||+++++++.... ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 357788899999999999999865 9999999997543 233577889999999999999999999998765 779999
Q ss_pred EcCCCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEe----CCCCCeeEcccCCccccC
Q 010932 138 QYMPNDTLSKHLFHWD-KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF----DEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfgla~~~~ 212 (497)
||+++++|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+|||+ +.++.+||+|||+++...
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC-EEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 9999999999996532 234999999999999999999999999 9999999999999 777889999999998654
Q ss_pred CC---CccccCCCCCCcccccc--------CCCCcccceeehhhhHHHHhhCCCCCCchhh-----HHHh---cccccc-
Q 010932 213 DG---KSYSTNLAYTPPEFLRT--------GRVIPESVIYSYGTVLLDLLSGKHIPPSHAL-----DVIR---GKNLLL- 272 (497)
Q Consensus 213 ~~---~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~slG~~l~elltg~~~~~~~~~-----~~~~---~~~~~~- 272 (497)
.. ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ..+. ......
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~ 247 (396)
T 4eut_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247 (396)
T ss_dssp CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTC
T ss_pred CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCccc
Confidence 43 34568999999999875 5678899999999999999999988743211 1000 000000
Q ss_pred ------c------c--ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 273 ------L------M--DSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 273 ------~------~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
. . ........+...+..+.+++.+||+.||++|||+.++++.++.+...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred chhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 0 0 00111234467888999999999999999999999999999887654
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-43 Score=338.11 Aligned_cols=247 Identities=16% Similarity=0.196 Sum_probs=202.5
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC------ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP------DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
.+.+++.||+|+||+||++... +|+.||||+++..... ..+.+.+|+.++++++||||+++++++......++
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 85 (283)
T 3bhy_A 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL 85 (283)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEE
Confidence 4677888999999999999986 5999999998754322 25679999999999999999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC----CeeEcccCCcccc
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG----DPRLSSFGLMKNS 211 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfgla~~~ 211 (497)
||||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++|+||||+||+++.++ .+||+|||++...
T Consensus 86 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~ 162 (283)
T 3bhy_A 86 ILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSKR-IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162 (283)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence 9999999999999965 467999999999999999999999999 99999999999998877 8999999999865
Q ss_pred CCC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHH
Q 010932 212 RDG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288 (497)
Q Consensus 212 ~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (497)
... ....+|+.|+|||++.+..++.++||||||+++|+|++|+.||.............. .............+.
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 240 (283)
T 3bhy_A 163 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISA--VNYDFDEEYFSNTSE 240 (283)
T ss_dssp C--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT--TCCCCCHHHHTTCCH
T ss_pred cCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHh--cccCCcchhcccCCH
Confidence 433 345688999999999989999999999999999999999998865433221111000 000000011123456
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+.+|+.+||+.||++|||+.+++++
T Consensus 241 ~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 241 LAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred HHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 79999999999999999999999985
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-44 Score=353.29 Aligned_cols=252 Identities=19% Similarity=0.235 Sum_probs=204.6
Q ss_pred CCcccccccCCCCCCcEEEEEEE----cCCcEEEEEEccCCC----CCChhHHHHHHHHhccC-CCCcceeeeeeeeeCC
Q 010932 61 FSSELIVSESGDKAPNVVYRGRL----KNNRLVAIKRFSRQS----WPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGD 131 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 131 (497)
...+.+++.||+|+||+||++.. .+|+.||||+++... ....+.+.+|+++|+.+ +||||+++++++....
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35678889999999999999997 358999999987532 22346688899999999 6999999999999999
Q ss_pred ceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcccc
Q 010932 132 ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS 211 (497)
Q Consensus 132 ~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 211 (497)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred eEEEEeecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 99999999999999999975 457999999999999999999999999 999999999999999999999999998754
Q ss_pred CCC-----CccccCCCCCCccccccC--CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCH
Q 010932 212 RDG-----KSYSTNLAYTPPEFLRTG--RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYAN 284 (497)
Q Consensus 212 ~~~-----~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (497)
... ....||+.|+|||++.+. .++.++|||||||++|+|++|+.||................. .....++.
T Consensus 210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~ 287 (355)
T 1vzo_A 210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL--KSEPPYPQ 287 (355)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH--HCCCCCCT
T ss_pred ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHh--ccCCCCCc
Confidence 322 235789999999999863 478899999999999999999998854321100000000011 01223455
Q ss_pred HHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhhh
Q 010932 285 EDATQLVELASKCLQYEAKDRP-----DVKFLLSAVAP 317 (497)
Q Consensus 285 ~~~~~l~~li~~cl~~dp~~Rp-----s~~~ll~~l~~ 317 (497)
..+..+.+||.+||+.||++|| |+.+++++..-
T Consensus 288 ~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f 325 (355)
T 1vzo_A 288 EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 325 (355)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcch
Confidence 6677899999999999999999 99999987544
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-43 Score=334.39 Aligned_cols=247 Identities=17% Similarity=0.142 Sum_probs=203.5
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
+.+.+++.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 35678888999999999999986 589999999875433 2356799999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC------
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD------ 213 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------ 213 (497)
+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++|+||||+||+++.++.+||+|||++.....
T Consensus 87 ~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 163 (276)
T 2yex_A 87 CSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (276)
T ss_dssp CTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred cCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence 999999999864 567999999999999999999999999 99999999999999999999999999875422
Q ss_pred CCccccCCCCCCccccccCCC-CcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 214 GKSYSTNLAYTPPEFLRTGRV-IPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 214 ~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
.....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.......... ................+..+.+
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 240 (276)
T 2yex_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY---SDWKEKKTYLNPWKKIDSAPLA 240 (276)
T ss_dssp BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHH---HHHHTTCTTSTTGGGSCHHHHH
T ss_pred ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHH---HHhhhcccccCchhhcCHHHHH
Confidence 234568899999999987665 789999999999999999999885432211100 0011111111122345678999
Q ss_pred HHHHhcccCCCCCCCHHHHHHH
Q 010932 293 LASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~ 314 (497)
|+.+||+.||++|||+.+++++
T Consensus 241 li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 241 LLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHCCCCchhCCCHHHHhcC
Confidence 9999999999999999999985
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-43 Score=340.03 Aligned_cols=245 Identities=19% Similarity=0.249 Sum_probs=206.6
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
.+.+++.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.+++.++||||+++++++......++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 102 (303)
T 3a7i_A 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 102 (303)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeC
Confidence 3577888999999999999975 589999999976543 34578999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----Cc
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KS 216 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 216 (497)
++++|.+++. ...+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... ..
T Consensus 103 ~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 178 (303)
T 3a7i_A 103 GGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 178 (303)
T ss_dssp TTEEHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCC
T ss_pred CCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChheEEECCCCCEEEeecccceecCccccccCc
Confidence 9999999985 467999999999999999999999999 999999999999999999999999999764432 34
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
..||+.|+|||++.+..++.++|||||||++|+|++|+.|+.......... .+........+...+..+.+|+.+
T Consensus 179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~ 253 (303)
T 3a7i_A 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF-----LIPKNNPPTLEGNYSKPLKEFVEA 253 (303)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-----HHHHSCCCCCCSSCCHHHHHHHHH
T ss_pred cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHH-----HhhcCCCCCCccccCHHHHHHHHH
Confidence 568899999999999999999999999999999999998875432221111 111111223344566779999999
Q ss_pred hcccCCCCCCCHHHHHHHhh
Q 010932 297 CLQYEAKDRPDVKFLLSAVA 316 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~l~ 316 (497)
||+.||++|||+.+++++..
T Consensus 254 ~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 254 CLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp HCCSSGGGSCCHHHHTTCHH
T ss_pred HcCCChhhCcCHHHHhhChh
Confidence 99999999999999998643
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=363.25 Aligned_cols=246 Identities=18% Similarity=0.146 Sum_probs=205.5
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC---CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
.|.+++.||+|+||+||+|..+ +|+.||||++.... ....+.+.+|+.+|++++||||+++++++.+....++|||
T Consensus 27 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 106 (484)
T 3nyv_A 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE 106 (484)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 5678888999999999999986 59999999996543 2346789999999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEe---CCCCCeeEcccCCccccCCCC
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF---DEDGDPRLSSFGLMKNSRDGK 215 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~~ 215 (497)
|+.+++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||+ +.++.+||+|||+++......
T Consensus 107 ~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 183 (484)
T 3nyv_A 107 VYTGGELFDEIIS--RKRFSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183 (484)
T ss_dssp CCCSCBHHHHHHT--CSCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC
T ss_pred cCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc
Confidence 9999999998865 567999999999999999999999999 9999999999999 567899999999998655443
Q ss_pred ---ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 216 ---SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 216 ---~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
...||+.|+|||++.+ .++.++|||||||++|+|++|..||................. ....+.....++.+.+
T Consensus 184 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~ 260 (484)
T 3nyv_A 184 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKY--TFELPQWKKVSESAKD 260 (484)
T ss_dssp SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--CCCSGGGGGSCHHHHH
T ss_pred ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC--CCCCcccccCCHHHHH
Confidence 3568999999999875 799999999999999999999999876533222111100000 0111112346778999
Q ss_pred HHHHhcccCCCCCCCHHHHHHH
Q 010932 293 LASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~ 314 (497)
||.+||+.||.+|||+.+++++
T Consensus 261 li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 261 LIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp HHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHCCCChhHCcCHHHHhhC
Confidence 9999999999999999999986
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-43 Score=354.65 Aligned_cols=245 Identities=18% Similarity=0.177 Sum_probs=191.2
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCC--------CChhHHHHHHHHhccCCCCcceeeeeeeeeCCc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSW--------PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 132 (497)
+.|.+++.||+|+||+||+|..+. ++.||||++..... .....+.+|+.+|++++||||+++++++.. +.
T Consensus 135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~ 213 (419)
T 3i6u_A 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-ED 213 (419)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SE
T ss_pred ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-Cc
Confidence 356788889999999999999764 89999999864321 112358999999999999999999999854 56
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC---CCeeEcccCCcc
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED---GDPRLSSFGLMK 209 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfgla~ 209 (497)
.++||||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.+ +.+||+|||+++
T Consensus 214 ~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~ 290 (419)
T 3i6u_A 214 YYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290 (419)
T ss_dssp EEEEEECCTTCBGGGGTSS--SCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred eEEEEEcCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCCCcceEEEeecccce
Confidence 8999999999999998865 567999999999999999999999999 9999999999999754 459999999998
Q ss_pred ccCCC---CccccCCCCCCcccccc---CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCC-
Q 010932 210 NSRDG---KSYSTNLAYTPPEFLRT---GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY- 282 (497)
Q Consensus 210 ~~~~~---~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 282 (497)
..... ....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... .....+........
T Consensus 291 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~----~~~~~i~~~~~~~~~ 366 (419)
T 3i6u_A 291 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV----SLKDQITSGKYNFIP 366 (419)
T ss_dssp SCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC----CHHHHHHTTCCCCCH
T ss_pred ecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH----HHHHHHhcCCCCCCc
Confidence 75543 34678999999999863 668899999999999999999999886431110 00011111101111
Q ss_pred --CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 283 --ANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 283 --~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
....+..+.+|+.+||+.||++|||+.+++++
T Consensus 367 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 367 EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 12346789999999999999999999999986
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-43 Score=344.42 Aligned_cols=248 Identities=15% Similarity=0.157 Sum_probs=203.4
Q ss_pred cccc-ccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC--CChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEEE
Q 010932 64 ELIV-SESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 64 ~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 138 (497)
+.+. +.||+|+||+||+|... +|+.||||++..... .....+.+|+.++..+ +||||+++++++......++|||
T Consensus 30 y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e 109 (327)
T 3lm5_A 30 YILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILE 109 (327)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred EeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEE
Confidence 4555 67899999999999986 499999999975432 2356899999999999 46999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC---CCCeeEcccCCccccCCC-
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE---DGDPRLSSFGLMKNSRDG- 214 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~~~- 214 (497)
|+++++|.+++.......+++..+..++.||+.||.|||+++ ++||||||+|||++. ++.+||+|||+++.....
T Consensus 110 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g-ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~ 188 (327)
T 3lm5_A 110 YAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN-IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC 188 (327)
T ss_dssp CCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC----
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc
Confidence 999999999986655678999999999999999999999999 999999999999997 789999999999865443
Q ss_pred --CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 215 --KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 215 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||.............. .............+..+.+
T Consensus 189 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~ 266 (327)
T 3lm5_A 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQ--VNVDYSEETFSSVSQLATD 266 (327)
T ss_dssp -----CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--TCCCCCTTTTTTSCHHHHH
T ss_pred ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHh--cccccCchhhcccCHHHHH
Confidence 345789999999999999999999999999999999999998865433322111110 1111122233456778999
Q ss_pred HHHHhcccCCCCCCCHHHHHHH
Q 010932 293 LASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~ 314 (497)
|+.+||+.||.+|||+.+++++
T Consensus 267 li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 267 FIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHHHHcCCChhhCcCHHHHhCC
Confidence 9999999999999999999986
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-43 Score=343.11 Aligned_cols=244 Identities=17% Similarity=0.158 Sum_probs=206.4
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCC---ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWP---DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
..|.+++.||+|+||.||++.+.+ ++.||+|++...... ..+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 467788889999999999999865 889999998754322 2457899999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 214 (497)
||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 121 e~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 197 (335)
T 2owb_A 121 ELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 197 (335)
T ss_dssp CCCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred ecCCCCCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CEecCCCchhEEEcCCCCEEEeeccCceecccCccc
Confidence 99999999998865 467999999999999999999999999 999999999999999999999999999865422
Q ss_pred -CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHH
Q 010932 215 -KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVEL 293 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 293 (497)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||........... +... ....+...+..+.+|
T Consensus 198 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~l 271 (335)
T 2owb_A 198 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR----IKKN--EYSIPKHINPVAASL 271 (335)
T ss_dssp BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HHHT--CCCCCTTSCHHHHHH
T ss_pred ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHH----HhcC--CCCCCccCCHHHHHH
Confidence 345689999999999988899999999999999999999998865432221111 0000 112344566789999
Q ss_pred HHHhcccCCCCCCCHHHHHHH
Q 010932 294 ASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 294 i~~cl~~dp~~Rps~~~ll~~ 314 (497)
+.+||+.||++|||+.+++++
T Consensus 272 i~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 272 IQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp HHHHTCSSGGGSCCGGGGGGS
T ss_pred HHHHccCChhHCcCHHHHhcC
Confidence 999999999999999999985
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-43 Score=336.20 Aligned_cols=244 Identities=17% Similarity=0.157 Sum_probs=206.2
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCC---hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
..|.+.+.||+|+||.||++.+.+ ++.||+|++....... .+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 467788889999999999999864 8899999987543322 457889999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 214 (497)
||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++|+||||+|||++.++.+||+|||++......
T Consensus 95 e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 171 (294)
T 2rku_A 95 ELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 171 (294)
T ss_dssp ECCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred ecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEcCCCCEEEEeccCceecccCccc
Confidence 99999999998865 467999999999999999999999999 999999999999999999999999999764322
Q ss_pred -CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHH
Q 010932 215 -KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVEL 293 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 293 (497)
....||+.|+|||++.+..++.++||||||+++|+|++|+.||........... +... ....+...+..+.+|
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~l 245 (294)
T 2rku_A 172 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR----IKKN--EYSIPKHINPVAASL 245 (294)
T ss_dssp BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HHTT--CCCCCTTSCHHHHHH
T ss_pred cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----Hhhc--cCCCccccCHHHHHH
Confidence 335689999999999988899999999999999999999998865432221111 1111 112344566789999
Q ss_pred HHHhcccCCCCCCCHHHHHHH
Q 010932 294 ASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 294 i~~cl~~dp~~Rps~~~ll~~ 314 (497)
+.+||+.||++|||+.+++++
T Consensus 246 i~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 246 IQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp HHHHTCSSGGGSCCGGGGGGS
T ss_pred HHHHcccChhhCcCHHHHhhC
Confidence 999999999999999999986
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=357.09 Aligned_cols=249 Identities=18% Similarity=0.218 Sum_probs=194.0
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeC-----Cce
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEG-----DER 133 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~ 133 (497)
+.|.+++.||+|+||+||+|.+.. |+.||||++...... ..+.+.+|+.+|+.++||||+++++++... ...
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 467888899999999999999764 899999999754322 246789999999999999999999999776 568
Q ss_pred EEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC
Q 010932 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD 213 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 213 (497)
++||||+. ++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 106 ~lv~e~~~-~~L~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~g-ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 181 (432)
T 3n9x_A 106 YIVLEIAD-SDLKKLFKT--PIFLTEEHIKTILYNLLLGENFIHESG-IIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181 (432)
T ss_dssp EEEEECCS-EEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred EEEEecCC-cCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence 99999986 699999865 567999999999999999999999999 99999999999999999999999999986432
Q ss_pred C--------------------------CccccCCCCCCcccc-ccCCCCcccceeehhhhHHHHhhCCCCC---------
Q 010932 214 G--------------------------KSYSTNLAYTPPEFL-RTGRVIPESVIYSYGTVLLDLLSGKHIP--------- 257 (497)
Q Consensus 214 ~--------------------------~~~~gt~~y~aPE~~-~~~~~~~~~Dv~slG~~l~elltg~~~~--------- 257 (497)
. ....||+.|+|||++ ....++.++|||||||++|||++|..|+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p 261 (432)
T 3n9x_A 182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFP 261 (432)
T ss_dssp -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCC
T ss_pred cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccc
Confidence 2 345789999999986 4566999999999999999999854332
Q ss_pred --Cchhh------------------HHH------------------hcccccccccc-ccCCCC-----CHHHHHHHHHH
Q 010932 258 --PSHAL------------------DVI------------------RGKNLLLLMDS-SLEGQY-----ANEDATQLVEL 293 (497)
Q Consensus 258 --~~~~~------------------~~~------------------~~~~~~~~~~~-~~~~~~-----~~~~~~~l~~l 293 (497)
++... +.+ ........+.. ...... .+..++.+.+|
T Consensus 262 ~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dL 341 (432)
T 3n9x_A 262 LFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINL 341 (432)
T ss_dssp SCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHH
T ss_pred cCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHH
Confidence 22100 000 00000000000 000000 12356789999
Q ss_pred HHHhcccCCCCCCCHHHHHHH
Q 010932 294 ASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 294 i~~cl~~dp~~Rps~~~ll~~ 314 (497)
+.+||+.||++|||+.+++++
T Consensus 342 l~~mL~~dP~~R~ta~e~L~H 362 (432)
T 3n9x_A 342 LESMLKFNPNKRITIDQALDH 362 (432)
T ss_dssp HHHHSCSSTTTSCCHHHHHTC
T ss_pred HHHHhcCCcccCCCHHHHhcC
Confidence 999999999999999999986
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=344.06 Aligned_cols=251 Identities=20% Similarity=0.215 Sum_probs=197.6
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeee--------
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAE-------- 129 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~-------- 129 (497)
.+.|.+++.||+|+||+||+|.+. +|+.||||++...... ....+.+|+.+|+.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 467889999999999999999985 5999999998654332 24578899999999999999999999977
Q ss_pred CCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 130 GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 130 ~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
.+..++||||+++ +|.+.+... ...+++..+..++.||+.||.|||++| ++||||||+|||++.++.+||+|||+++
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CceEEEEEeccCC-CHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 3468999999975 677777542 457999999999999999999999999 9999999999999999999999999997
Q ss_pred ccCCC--------CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc--ccccccc
Q 010932 210 NSRDG--------KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL--LLMDSSL 278 (497)
Q Consensus 210 ~~~~~--------~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~--~~~~~~~ 278 (497)
..... ....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.............. .......
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 252 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 252 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhh
Confidence 54321 23467899999999976 4579999999999999999999988865432211110000 0000000
Q ss_pred -----------------CCCCC--H-----HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 279 -----------------EGQYA--N-----EDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 279 -----------------~~~~~--~-----~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..... . ..++.+.+|+.+||+.||++|||+.+++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 253 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp STTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 00000 0 014568999999999999999999999986
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-43 Score=336.11 Aligned_cols=247 Identities=16% Similarity=0.223 Sum_probs=199.6
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeee----CCceE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAE----GDERL 134 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~ 134 (497)
..+.+.+.||+|+||+||+|.+. ++..||+|++...... ..+.+.+|+.+|+.++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 34667778999999999999975 4889999998754322 24678999999999999999999999865 35589
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CcccccCCCcceEeC-CCCCeeEcccCCccccC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQN-RKLYHDLNAYRVLFD-EDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~-~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~ 212 (497)
+||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ +++|+||||+|||++ .++.+||+|||++....
T Consensus 106 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEEEecCCCCHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 99999999999999965 467999999999999999999999985 499999999999998 88999999999997654
Q ss_pred CC--CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHH
Q 010932 213 DG--KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290 (497)
Q Consensus 213 ~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (497)
.. ....||+.|+|||++. +.++.++|||||||++|+|++|+.||............. .........+...++.+
T Consensus 184 ~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l 259 (290)
T 1t4h_A 184 ASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRV---TSGVKPASFDKVAIPEV 259 (290)
T ss_dssp TTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHH---TTTCCCGGGGGCCCHHH
T ss_pred ccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHH---hccCCccccCCCCCHHH
Confidence 43 2456899999999887 569999999999999999999999886532211111111 11111112223345679
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHH
Q 010932 291 VELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 291 ~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+|+.+||+.||.+|||+.+++++
T Consensus 260 ~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 260 KEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHccCChhhCCCHHHHhhC
Confidence 999999999999999999999985
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-43 Score=363.07 Aligned_cols=245 Identities=17% Similarity=0.180 Sum_probs=201.5
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCC-------------CChhHHHHHHHHhccCCCCcceeeeeee
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSW-------------PDPHQFVTEAAGLGNVRHKRLVNLIGCC 127 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~~~~~~ 127 (497)
..|.+++.||+|+||+||+|.++. ++.||||++..... ...+.+.+|+.+|+.++||||+++++++
T Consensus 36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 115 (504)
T 3q5i_A 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF 115 (504)
T ss_dssp GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 457888999999999999999864 88999999975432 2346799999999999999999999999
Q ss_pred eeCCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC---CeeEcc
Q 010932 128 AEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG---DPRLSS 204 (497)
Q Consensus 128 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~---~~kl~D 204 (497)
.+....++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++ .+||+|
T Consensus 116 ~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 116 EDKKYFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLHKHN-IVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESSTTCCSSEEECC
T ss_pred EcCCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCcHHHEEEecCCCCccEEEEE
Confidence 999999999999999999998865 467999999999999999999999999 99999999999998776 699999
Q ss_pred cCCccccCCC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCC
Q 010932 205 FGLMKNSRDG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQ 281 (497)
Q Consensus 205 fgla~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (497)
||+++..... ....||+.|+|||++. +.++.++|||||||++|+|++|..||.......+..... .......
T Consensus 193 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~----~~~~~~~ 267 (504)
T 3q5i_A 193 FGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVE----KGKYYFD 267 (504)
T ss_dssp CTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH----HCCCCCC
T ss_pred CCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH----cCCCCCC
Confidence 9999865443 3467899999999987 569999999999999999999999987654332221111 1100000
Q ss_pred --CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 282 --YANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 282 --~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.....+..+.+|+.+||+.||.+|||+.+++++
T Consensus 268 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 268 FNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 012356789999999999999999999999986
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=374.18 Aligned_cols=244 Identities=17% Similarity=0.254 Sum_probs=203.2
Q ss_pred ccCCCCCCcEEEEEEEc---CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCC
Q 010932 68 SESGDKAPNVVYRGRLK---NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 142 (497)
+.||+|+||+||+|.+. .++.||||+++..... ..+.+.+|+.+|++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 36899999999999753 3689999999764322 24689999999999999999999999964 568999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-------
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK------- 215 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------- 215 (497)
|+|.+++.. ...+++..+..|+.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++......
T Consensus 454 g~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~yLH~~~-iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 530 (635)
T 4fl3_A 454 GPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530 (635)
T ss_dssp EEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred CCHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHHHHCC-EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccccc
Confidence 999999965 567999999999999999999999999 9999999999999999999999999998654322
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 294 (497)
...+|+.|+|||++.+..++.++|||||||+||||++ |+.||.......+ ...+........+..++..+.+||
T Consensus 531 ~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~-----~~~i~~~~~~~~p~~~~~~l~~li 605 (635)
T 4fl3_A 531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-----TAMLEKGERMGCPAGCPREMYDLM 605 (635)
T ss_dssp ----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH-----HHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred CCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHcCCCCCCCCCCCHHHHHHH
Confidence 2345678999999999999999999999999999998 9988865433322 122222233445666788899999
Q ss_pred HHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 295 SKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 295 ~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
.+||+.||++|||+.+|++.|+.+..
T Consensus 606 ~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 606 NLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp HHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 99999999999999999999987753
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-43 Score=339.99 Aligned_cols=248 Identities=20% Similarity=0.235 Sum_probs=200.3
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
..+.+++.||+|+||.||+|.+.. |+.||+|++........+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (302)
T 2j7t_A 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFC 98 (302)
T ss_dssp GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECC
T ss_pred cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeC
Confidence 456788899999999999999864 8999999998776666788999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcccc----CCCCc
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS----RDGKS 216 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~----~~~~~ 216 (497)
++++|.+++... ...+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||++... .....
T Consensus 99 ~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 176 (302)
T 2j7t_A 99 PGGAVDAIMLEL-DRGLTEPQIQVVCRQMLEALNFLHSKR-IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS 176 (302)
T ss_dssp TTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC---
T ss_pred CCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEECCCCCEEEEECCCCcccccccccccc
Confidence 999999988642 457999999999999999999999999 999999999999999999999999987532 12234
Q ss_pred cccCCCCCCccccc-----cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLR-----TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291 (497)
Q Consensus 217 ~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (497)
..||+.|+|||++. +..++.++|||||||++|+|++|..|+.............. ........+..++..+.
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~ 253 (302)
T 2j7t_A 177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK---SDPPTLLTPSKWSVEFR 253 (302)
T ss_dssp --CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---SCCCCCSSGGGSCHHHH
T ss_pred ccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhc---cCCcccCCccccCHHHH
Confidence 57899999999984 56789999999999999999999988765432211110000 00011122345677899
Q ss_pred HHHHHhcccCCCCCCCHHHHHHH
Q 010932 292 ELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+|+.+||+.||++|||+.+++++
T Consensus 254 ~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 254 DFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp HHHHHHSCSCTTTSCCHHHHTTS
T ss_pred HHHHHHcccChhhCCCHHHHhcC
Confidence 99999999999999999999875
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-43 Score=343.79 Aligned_cols=258 Identities=21% Similarity=0.267 Sum_probs=198.7
Q ss_pred cCCCcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHH--hccCCCCcceeeeeeeee-----CC
Q 010932 59 NGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAG--LGNVRHKRLVNLIGCCAE-----GD 131 (497)
Q Consensus 59 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~~~~~~~~-----~~ 131 (497)
-+++.+.+++.||+|+||+||+|.. +++.||||++.... ...+..|.++ +..++||||+++++.+.. ..
T Consensus 10 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 10 LDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred cChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 3467788999999999999999987 68999999996432 3445555544 556899999999986543 23
Q ss_pred ceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---------CCcccccCCCcceEeCCCCCeeE
Q 010932 132 ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQ---------NRKLYHDLNAYRVLFDEDGDPRL 202 (497)
Q Consensus 132 ~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~---------~~iiH~Dlkp~Nill~~~~~~kl 202 (497)
..++||||+++|+|.+++.. ...++..+..++.||+.||.|||+. + ++||||||+|||++.++.+||
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA-ISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC-EECSSCSGGGEEECTTSCEEE
T ss_pred eEEEEEecCCCCcHHHHHhh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccc-eeecccccceEEEcCCCcEEE
Confidence 56899999999999999964 4558999999999999999999999 8 999999999999999999999
Q ss_pred cccCCccccCCC------------CccccCCCCCCcccccc-------CCCCcccceeehhhhHHHHhhCCCCCCchhhH
Q 010932 203 SSFGLMKNSRDG------------KSYSTNLAYTPPEFLRT-------GRVIPESVIYSYGTVLLDLLSGKHIPPSHALD 263 (497)
Q Consensus 203 ~Dfgla~~~~~~------------~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~ 263 (497)
+|||+++..... ....||+.|+|||++.+ ..++.++|||||||++|||++|..||......
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 999999754321 13468999999999986 45678999999999999999998765332110
Q ss_pred HHhcc-------------cccc-ccccccCCCC------CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcccc
Q 010932 264 VIRGK-------------NLLL-LMDSSLEGQY------ANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323 (497)
Q Consensus 264 ~~~~~-------------~~~~-~~~~~~~~~~------~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~ 323 (497)
..... .... .........+ ....+..+.+||.+||+.||++|||+.++++.|+.+.....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~ 321 (336)
T 3g2f_A 242 PEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321 (336)
T ss_dssp CCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred hHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence 00000 0000 0011111111 23467789999999999999999999999999999876554
Q ss_pred c
Q 010932 324 V 324 (497)
Q Consensus 324 ~ 324 (497)
.
T Consensus 322 ~ 322 (336)
T 3g2f_A 322 R 322 (336)
T ss_dssp C
T ss_pred h
Confidence 3
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-43 Score=345.62 Aligned_cols=252 Identities=19% Similarity=0.179 Sum_probs=196.7
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC-----hhHHHHHHHHhccCCCCcceeeeeeeeeCCceE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD-----PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 134 (497)
...|.+++.||+|+||+||+|.+. +|+.||||++....... .+.+.+|+.+++.++||||+++++++.+....+
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS 88 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence 356678888999999999999976 48999999997533211 357889999999999999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
+||||+++ +|..++.. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 89 lv~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 89 LVFDFMET-DLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp EEEECCSE-EHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred EEEEcCCC-CHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 99999975 78888854 3457899999999999999999999999 999999999999999999999999999865332
Q ss_pred ----CccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccc----------------
Q 010932 215 ----KSYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLL---------------- 273 (497)
Q Consensus 215 ----~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~---------------- 273 (497)
....+|+.|+|||++.+. .++.++|||||||++|+|++|..||................
T Consensus 166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 245 (346)
T 1ua2_A 166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD 245 (346)
T ss_dssp CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTT
T ss_pred cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcc
Confidence 345789999999999764 48899999999999999999998876543221111000000
Q ss_pred -cccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010932 274 -MDSSLEGQYA-----NEDATQLVELASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 274 -~~~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l 315 (497)
.........+ ...+..+.+||.+||+.||++|||+.+++++-
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 246 YVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp CCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred cccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 0000000111 33457899999999999999999999999863
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-44 Score=358.32 Aligned_cols=240 Identities=12% Similarity=0.090 Sum_probs=189.0
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC---CCChhHHHHHH---HHhccCCCCcceeee-------eee
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS---WPDPHQFVTEA---AGLGNVRHKRLVNLI-------GCC 127 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~---~~l~~l~h~niv~~~-------~~~ 127 (497)
..+.+++.||+|+||+||+|.+. +|+.||||++.... ....+.+.+|+ ++|+.++|||||+++ +++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 45677889999999999999964 59999999997432 22356799999 556666899999998 555
Q ss_pred eeCC-----------------ceEEEEEcCCCCChhhhhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccc
Q 010932 128 AEGD-----------------ERLLVAQYMPNDTLSKHLFHWD-----KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH 185 (497)
Q Consensus 128 ~~~~-----------------~~~lv~e~~~~~~L~~~l~~~~-----~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~ 185 (497)
...+ ..++||||+ +|+|.+++.... ...+++..+..|+.||+.||.|||+++ |+||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHr 230 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHT 230 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT-EECS
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC-eecC
Confidence 5443 378999999 689999997521 123345888899999999999999999 9999
Q ss_pred cCCCcceEeCCCCCeeEcccCCccccCCC-CccccCCCCCCccccccC-----------CCCcccceeehhhhHHHHhhC
Q 010932 186 DLNAYRVLFDEDGDPRLSSFGLMKNSRDG-KSYSTNLAYTPPEFLRTG-----------RVIPESVIYSYGTVLLDLLSG 253 (497)
Q Consensus 186 Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~slG~~l~elltg 253 (497)
||||+|||++.++.+||+|||+++..... ....| +.|+|||++.+. .++.++|||||||++|||++|
T Consensus 231 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg 309 (377)
T 3byv_A 231 YLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCA 309 (377)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHS
T ss_pred CCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHC
Confidence 99999999999999999999999865443 34566 999999999887 899999999999999999999
Q ss_pred CCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 254 KHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+.||....... ....+.. ....+++.+.+|+.+||+.||++|||+.+++++
T Consensus 310 ~~Pf~~~~~~~----~~~~~~~------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 310 DLPITKDAALG----GSEWIFR------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp SCCC------C----CSGGGGS------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred CCCCccccccc----chhhhhh------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 98885432111 1111111 113356779999999999999999999999984
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-42 Score=336.32 Aligned_cols=246 Identities=16% Similarity=0.210 Sum_probs=201.7
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
+.+.+++.||.|+||.||+|.+.. |+.||||++.... ..+.+.+|+.+++.++||||+++++++......++||||+
T Consensus 29 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 106 (314)
T 3com_A 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYC 106 (314)
T ss_dssp -CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecC
Confidence 456788899999999999999864 9999999997643 4578999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----Cc
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KS 216 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 216 (497)
++++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... ..
T Consensus 107 ~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 184 (314)
T 3com_A 107 GAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFMR-KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 184 (314)
T ss_dssp TTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCC
T ss_pred CCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCc
Confidence 99999999863 2567999999999999999999999999 999999999999999999999999999754432 34
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
..+|+.|+|||++.+..++.++|||||||++|+|++|+.||........... ... ........+...+..+.+|+.+
T Consensus 185 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~l~~li~~ 261 (314)
T 3com_A 185 VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFM-IPT--NPPPTFRKPELWSDNFTDFVKQ 261 (314)
T ss_dssp CCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-HHH--SCCCCCSSGGGSCHHHHHHHHH
T ss_pred cCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHH-Hhc--CCCcccCCcccCCHHHHHHHHH
Confidence 5688999999999988999999999999999999999988764322111100 000 0011112234457789999999
Q ss_pred hcccCCCCCCCHHHHHHH
Q 010932 297 CLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~ 314 (497)
||+.||.+|||+.+++++
T Consensus 262 ~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 262 CLVKSPEQRATATQLLQH 279 (314)
T ss_dssp HTCSCTTTSCCHHHHTTS
T ss_pred HccCChhhCcCHHHHHhC
Confidence 999999999999999985
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-43 Score=347.59 Aligned_cols=247 Identities=21% Similarity=0.232 Sum_probs=191.6
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeCC------c
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD------E 132 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~ 132 (497)
..|.+++.||+|+||+||+|... +|+.||||++...... ..+.+.+|+.+++.++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 56788899999999999999975 4899999999754322 2356889999999999999999999997654 6
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
.++||||++ ++|.+.+. ..+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 105 VYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178 (371)
T ss_dssp EEEEEECCS-EEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred eEEEEEcCC-CCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence 899999997 47888874 46899999999999999999999999 9999999999999999999999999998654
Q ss_pred CC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccc-----------------
Q 010932 213 DG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLL----------------- 272 (497)
Q Consensus 213 ~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~----------------- 272 (497)
.. ....||+.|+|||++.+..++.++|||||||++|+|++|+.||...............
T Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 258 (371)
T 2xrw_A 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 258 (371)
T ss_dssp -----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHH
T ss_pred cccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHH
Confidence 33 3457899999999999999999999999999999999999988654322111000000
Q ss_pred ----------------ccccccCC---CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 273 ----------------LMDSSLEG---QYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 273 ----------------~~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.......+ ..+...+..+.+|+.+||+.||++|||+.+++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 00000000 0012346789999999999999999999999986
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=338.78 Aligned_cols=254 Identities=19% Similarity=0.263 Sum_probs=206.3
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeee--CCceEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAE--GDERLL 135 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~l 135 (497)
.+.+.+++.||+|+||.||++... +|+.||+|++...... ..+.+.+|+.++++++||||+++++++.. ....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 456788899999999999999986 5999999999765432 24578999999999999999999998854 567899
Q ss_pred EEEcCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCC----cccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 136 VAQYMPNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNSQNR----KLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lh~~~~----iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
||||+++++|.+++... ....+++..+..++.||+.||.|||+.+. ++|+||||+|||++.++.+||+|||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999998653 23459999999999999999999998763 9999999999999999999999999988
Q ss_pred ccCCCC----ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHH
Q 010932 210 NSRDGK----SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANE 285 (497)
Q Consensus 210 ~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (497)
...... ...+|+.|+|||++.+..++.++||||||+++|+|++|+.||........... +........+..
T Consensus 165 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-----i~~~~~~~~~~~ 239 (279)
T 2w5a_A 165 ILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK-----IREGKFRRIPYR 239 (279)
T ss_dssp HC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-----HHHTCCCCCCTT
T ss_pred eeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHH-----HhhcccccCCcc
Confidence 655432 34678999999999988999999999999999999999988865433222111 111112234455
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 286 DATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 286 ~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
.+..+.+++.+||+.||++|||+.+|++++....
T Consensus 240 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 273 (279)
T 2w5a_A 240 YSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273 (279)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred cCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence 6788999999999999999999999999766543
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-43 Score=333.20 Aligned_cols=245 Identities=20% Similarity=0.232 Sum_probs=199.5
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCC---CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQ---SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
...+.+.+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|+.+++.++||||+++++++......++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 356788889999999999999986 5999999998643 223456799999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 214 (497)
|||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++|+||||+|||++.++.+||+|||++......
T Consensus 90 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 166 (276)
T 2h6d_A 90 MEYVSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166 (276)
T ss_dssp EECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHC-SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred EeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChhhEEECCCCCEEEeecccccccCCCcc
Confidence 999999999999975 457999999999999999999999999 999999999999999999999999999865443
Q ss_pred -CccccCCCCCCccccccCCC-CcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 215 -KSYSTNLAYTPPEFLRTGRV-IPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
....+|+.|+|||.+.+..+ +.++||||||+++|+|++|+.||............ ... ....+...+..+.+
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~----~~~--~~~~~~~~~~~l~~ 240 (276)
T 2h6d_A 167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI----RGG--VFYIPEYLNRSVAT 240 (276)
T ss_dssp ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----HHC--CCCCCTTSCHHHHH
T ss_pred eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHh----hcC--cccCchhcCHHHHH
Confidence 24567899999999987665 68999999999999999999988654332221110 000 11234445678999
Q ss_pred HHHHhcccCCCCCCCHHHHHHH
Q 010932 293 LASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~ 314 (497)
++.+||+.||++|||+.+++++
T Consensus 241 li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 241 LLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHccCChhhCCCHHHHHhC
Confidence 9999999999999999999985
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-43 Score=339.06 Aligned_cols=254 Identities=18% Similarity=0.235 Sum_probs=187.4
Q ss_pred CCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC-CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
..+.+.+++.||+|+||+||+|.+. +++.||||++.... ....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 3467788899999999999999965 58999999987543 223567899999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhc------CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcccc
Q 010932 138 QYMPNDTLSKHLFH------WDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS 211 (497)
Q Consensus 138 e~~~~~~L~~~l~~------~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 211 (497)
||+++++|.+++.. .....+++..+..++.||+.||.|||+++ ++|+||||+|||++.++.+||+|||++...
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 171 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG-QIHRDVKAGNILLGEDGSVQIADFGVSAFL 171 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence 99999999999863 12456999999999999999999999999 999999999999999999999999998754
Q ss_pred CCC---------CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhc----cccccccccc
Q 010932 212 RDG---------KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRG----KNLLLLMDSS 277 (497)
Q Consensus 212 ~~~---------~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~----~~~~~~~~~~ 277 (497)
... ....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.......... ..........
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 251 (303)
T 2vwi_A 172 ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGV 251 (303)
T ss_dssp C---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC--
T ss_pred ccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcccccc
Confidence 322 23468999999999976 568999999999999999999999886532211110 0000000000
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 278 LEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 278 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.........+..+.+|+.+||+.||.+|||+.+++++
T Consensus 252 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 252 QDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp ---CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 1112223456779999999999999999999999985
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-43 Score=345.74 Aligned_cols=250 Identities=17% Similarity=0.215 Sum_probs=188.7
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCC-CCcceeeeeeeee--------CCc
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR-HKRLVNLIGCCAE--------GDE 132 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~--------~~~ 132 (497)
.+.+++.||+|+||.||++.+. +|+.||||++........+.+.+|+.++.++. ||||+++++++.. ...
T Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 108 (337)
T 3ll6_A 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAE 108 (337)
T ss_dssp EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEE
T ss_pred eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCce
Confidence 5678889999999999999975 58999999986654444567899999999996 9999999999843 345
Q ss_pred eEEEEEcCCCCChhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CcccccCCCcceEeCCCCCeeEcccCCccc
Q 010932 133 RLLVAQYMPNDTLSKHLFH-WDKQPLPWEMRVRVAYYIAQALDHCNSQN-RKLYHDLNAYRVLFDEDGDPRLSSFGLMKN 210 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~-~~~~~l~~~~~~~i~~~i~~~L~~lh~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 210 (497)
.++||||+. |+|.+++.. ...+.+++..+..++.||+.||.|||+++ +++||||||+|||++.++.+||+|||+++.
T Consensus 109 ~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 187 (337)
T 3ll6_A 109 FLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATT 187 (337)
T ss_dssp EEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBC
T ss_pred EEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCcccee
Confidence 799999995 789888754 23457999999999999999999999875 499999999999999999999999999986
Q ss_pred cCCCC----------------ccccCCCCCCcccc---ccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc
Q 010932 211 SRDGK----------------SYSTNLAYTPPEFL---RTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL 271 (497)
Q Consensus 211 ~~~~~----------------~~~gt~~y~aPE~~---~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~ 271 (497)
..... ...+|+.|+|||++ .+..++.++|||||||++|+|++|+.||.......
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------- 260 (337)
T 3ll6_A 188 ISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR------- 260 (337)
T ss_dssp CSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------------
T ss_pred ccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-------
Confidence 54321 34578999999998 56678999999999999999999999885432211
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 272 LLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
..........+...+..+.+|+.+||+.||.+|||+.+++++|+.+...
T Consensus 261 -~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~ 309 (337)
T 3ll6_A 261 -IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA 309 (337)
T ss_dssp ------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -hhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 1111111122233445688999999999999999999999999988754
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-44 Score=360.05 Aligned_cols=250 Identities=16% Similarity=0.180 Sum_probs=200.5
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCC--------CCcceeeeeeee----
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR--------HKRLVNLIGCCA---- 128 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~~~~~~~---- 128 (497)
..|.+++.||+|+||+||+|.+. +|+.||||++.... ...+.+.+|+.+|+.++ |+||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 56788999999999999999975 48999999997432 23467889999999985 788999999987
Q ss_pred eCCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCcccccCCCcceEeCCCC---------
Q 010932 129 EGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQ-NRKLYHDLNAYRVLFDEDG--------- 198 (497)
Q Consensus 129 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~-~~iiH~Dlkp~Nill~~~~--------- 198 (497)
.....++||||+ +++|.+.+.......+++..+..++.||+.||.|||++ + |+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g-ivHrDikp~NIll~~~~~~~~~~~~~ 193 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR-IIHTDIKPENILLSVNEQYIRRLAAE 193 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECCCCSGGGEEECCCHHHHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHeeEeccchhhhhhhhh
Confidence 456789999999 66677776654456799999999999999999999998 8 99999999999999775
Q ss_pred ----------------------------------------CeeEcccCCccccCCC-CccccCCCCCCccccccCCCCcc
Q 010932 199 ----------------------------------------DPRLSSFGLMKNSRDG-KSYSTNLAYTPPEFLRTGRVIPE 237 (497)
Q Consensus 199 ----------------------------------------~~kl~Dfgla~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~ 237 (497)
.+||+|||+++..... ....||+.|+|||++.+..++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 273 (397)
T 1wak_A 194 ATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTP 273 (397)
T ss_dssp HC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTH
T ss_pred hHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcH
Confidence 8999999999865433 44678999999999999999999
Q ss_pred cceeehhhhHHHHhhCCCCCCchhhHH-------Hh------cc---------c-ccccccc------------------
Q 010932 238 SVIYSYGTVLLDLLSGKHIPPSHALDV-------IR------GK---------N-LLLLMDS------------------ 276 (497)
Q Consensus 238 ~Dv~slG~~l~elltg~~~~~~~~~~~-------~~------~~---------~-~~~~~~~------------------ 276 (497)
+|||||||++|+|+||+.||....... .. .. . .......
T Consensus 274 ~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (397)
T 1wak_A 274 ADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEV 353 (397)
T ss_dssp HHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHh
Confidence 999999999999999999886421100 00 00 0 0000000
Q ss_pred -ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 277 -SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 277 -~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
......+...+..+.+||.+||+.||++|||+.+++++
T Consensus 354 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 354 LVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp HHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred hhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 00112456778899999999999999999999999985
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=353.12 Aligned_cols=248 Identities=12% Similarity=0.010 Sum_probs=184.2
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC---hhHHHHHH---HHhccCCCCcceeee-------eeee
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD---PHQFVTEA---AGLGNVRHKRLVNLI-------GCCA 128 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~---~~l~~l~h~niv~~~-------~~~~ 128 (497)
.+.+++.||+|+||+||+|.+. +|+.||||++....... .+.+.+|+ .+|+. +||||++++ +++.
T Consensus 63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEE
T ss_pred eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhee
Confidence 3677888999999999999976 59999999998754322 34677784 55555 799988755 4443
Q ss_pred eC-----------------CceEEEEEcCCCCChhhhhhcCCCCCCCHHHH------HHHHHHHHHHHHHHHcCCCcccc
Q 010932 129 EG-----------------DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR------VRVAYYIAQALDHCNSQNRKLYH 185 (497)
Q Consensus 129 ~~-----------------~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~------~~i~~~i~~~L~~lh~~~~iiH~ 185 (497)
.. ...++||||++ ++|.+++... +..+++..+ ..++.||+.||.|||+++ |+||
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~-ivHr 218 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL-DFVYVFRGDEGILALHILTAQLIRLAANLQSKG-LVHG 218 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH-HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT-EEET
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh-ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC-CccC
Confidence 32 23799999998 8999999753 234455555 778899999999999999 9999
Q ss_pred cCCCcceEeCCCCCeeEcccCCccccCCCC-ccccCCCCCCcccccc--CCCCcccceeehhhhHHHHhhCCCCCCchhh
Q 010932 186 DLNAYRVLFDEDGDPRLSSFGLMKNSRDGK-SYSTNLAYTPPEFLRT--GRVIPESVIYSYGTVLLDLLSGKHIPPSHAL 262 (497)
Q Consensus 186 Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~~~~~~~~ 262 (497)
||||+|||++.++.+||+|||+++...... ...+|+.|+|||++.+ ..++.++|||||||++|||+||+.||.....
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 298 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP 298 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence 999999999999999999999998766554 5567799999999987 6799999999999999999999998865422
Q ss_pred HHHhcccc---ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 263 DVIRGKNL---LLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 263 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
........ ................+..+.+|+.+||+.||++|||+.+++++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 299 GIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp TCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred ccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 21111110 11111111112223567889999999999999999999999874
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-43 Score=348.21 Aligned_cols=248 Identities=20% Similarity=0.221 Sum_probs=183.0
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeC------Cc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEG------DE 132 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~ 132 (497)
..|.+++.||+|+||+||+|.+. +|+.||||++...... ..+.+.+|+.+|+.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 46788899999999999999975 5999999999754322 245788999999999999999999998654 56
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
.++|+|++ +++|.+++. ...+++..+..++.||+.||.|||+.| ++||||||+|||++.++.+||+|||+++...
T Consensus 109 ~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp CEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECC--------
T ss_pred EEEEeccc-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 79999999 789998885 357999999999999999999999999 9999999999999999999999999998654
Q ss_pred CC-CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc-------------------
Q 010932 213 DG-KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL------------------- 271 (497)
Q Consensus 213 ~~-~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~------------------- 271 (497)
.. ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||++............
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~ 263 (367)
T 2fst_X 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263 (367)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHH
T ss_pred ccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence 33 45678999999999987 6789999999999999999999999876432211100000
Q ss_pred ccccccc-CCC-----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 272 LLMDSSL-EGQ-----YANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 272 ~~~~~~~-~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..+.... ... .....++.+.+|+.+||+.||++|||+.+++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000000 000 011245679999999999999999999999986
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-43 Score=355.75 Aligned_cols=249 Identities=16% Similarity=0.180 Sum_probs=200.5
Q ss_pred cccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccC------CCCcceeeeeeeeeCCceEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNV------RHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~~~~~~~~~~~~~l 135 (497)
.|.+++.||+|+||+||+|.+.. ++.||||++.... ...+.+.+|+.+++.+ +|+||+++++++....+.++
T Consensus 98 ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l 176 (429)
T 3kvw_A 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICM 176 (429)
T ss_dssp TEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEE
T ss_pred cEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEE
Confidence 47888899999999999999764 8999999997532 1235677888888776 57899999999999999999
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCC--eeEcccCCccccCC
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGD--PRLSSFGLMKNSRD 213 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~--~kl~Dfgla~~~~~ 213 (497)
||||+. ++|.+++.......+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||+++....
T Consensus 177 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~ 254 (429)
T 3kvw_A 177 TFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR-IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ 254 (429)
T ss_dssp EECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT-EECSCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred EEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEccCCCcceEEeecccceecCC
Confidence 999995 68999987765667999999999999999999999999 999999999999999887 99999999976544
Q ss_pred C-CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccc-----------------cccccc
Q 010932 214 G-KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKN-----------------LLLLMD 275 (497)
Q Consensus 214 ~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~-----------------~~~~~~ 275 (497)
. ....||+.|+|||++.+..++.++|||||||++|||+||..||............ ....++
T Consensus 255 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~ 334 (429)
T 3kvw_A 255 RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVS 334 (429)
T ss_dssp CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBC
T ss_pred cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccC
Confidence 3 4567899999999999999999999999999999999999888654322110000 000000
Q ss_pred cc---------------------------c-----C----CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 276 SS---------------------------L-----E----GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 276 ~~---------------------------~-----~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.. . . ...+...++.+.+||.+||+.||++|||+.++|++
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~H 409 (429)
T 3kvw_A 335 SKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRH 409 (429)
T ss_dssp TTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCC
Confidence 00 0 0 00011225679999999999999999999999986
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-43 Score=337.23 Aligned_cols=256 Identities=16% Similarity=0.159 Sum_probs=204.1
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeee-eeCCceEEEEEc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCC-AEGDERLLVAQY 139 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~ 139 (497)
+.+.+++.||+|+||+||+|.+. +|+.||||++.... ..+.+.+|+.+++.++|++++..+..+ ......++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 3uzp_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence 45678888999999999999974 69999999987543 235799999999999988877666655 556778999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEe---CCCCCeeEcccCCccccCCC--
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF---DEDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~-- 214 (497)
+ +++|.+++... ...+++..+..++.||+.||.|||+++ ++||||||+|||+ +.++.+||+|||+++.....
T Consensus 87 ~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (296)
T 3uzp_A 87 L-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp C-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred c-CCCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence 9 99999999642 467999999999999999999999999 9999999999999 48899999999998754332
Q ss_pred ---------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCC---CC
Q 010932 215 ---------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEG---QY 282 (497)
Q Consensus 215 ---------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 282 (497)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||........ ......+....... ..
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 242 (296)
T 3uzp_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK-RQKYERISEKKMSTPIEVL 242 (296)
T ss_dssp CCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS-SSHHHHHHHHHHHSCHHHH
T ss_pred ccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhh-hhhhhhhcccccCCchHHH
Confidence 345689999999999999999999999999999999999998864211000 00000000000000 01
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcccc
Q 010932 283 ANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323 (497)
Q Consensus 283 ~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~ 323 (497)
+..+++.+.+|+.+||+.||++|||+.++++.|+.+.....
T Consensus 243 ~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 243 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 13356779999999999999999999999999998875443
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=345.35 Aligned_cols=246 Identities=11% Similarity=0.145 Sum_probs=202.5
Q ss_pred CcccccccCCCCCCcEEEEEE------EcCCcEEEEEEccCCCCCChhHHHHHHHHhccCC---CCcceeeeeeeeeCCc
Q 010932 62 SSELIVSESGDKAPNVVYRGR------LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR---HKRLVNLIGCCAEGDE 132 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~------~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~ 132 (497)
..+.+++.||+|+||+||+|. ..+++.||||++... ....+.+|++++..++ |+||+.+++++...+.
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~ 141 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG 141 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC
Confidence 557788889999999999994 345899999999754 3567888888888886 9999999999999999
Q ss_pred eEEEEEcCCCCChhhhhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC-----------CC
Q 010932 133 RLLVAQYMPNDTLSKHLFHW---DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE-----------DG 198 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~---~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~-----------~~ 198 (497)
.++||||+++|+|.+++... ....+++..+..|+.||+.||.|||+++ |+||||||+|||++. ++
T Consensus 142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-ivHrDiKp~NIll~~~~~~~~~~~~~~~ 220 (365)
T 3e7e_A 142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE-IIHGDIKPDNFILGNGFLEQDDEDDLSA 220 (365)
T ss_dssp EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECGGGTCC------CT
T ss_pred cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEecccccCccccccccC
Confidence 99999999999999999642 2567999999999999999999999999 999999999999998 89
Q ss_pred CeeEcccCCccccC---CC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccc
Q 010932 199 DPRLSSFGLMKNSR---DG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLL 272 (497)
Q Consensus 199 ~~kl~Dfgla~~~~---~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~ 272 (497)
.+||+|||+++... .. ....||+.|+|||++.+..++.++|||||||++|||+||+.||....... .
T Consensus 221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-------~ 293 (365)
T 3e7e_A 221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-------C 293 (365)
T ss_dssp TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-------E
T ss_pred CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-------e
Confidence 99999999996432 11 34568999999999999999999999999999999999998875432111 0
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHhhhhhcc
Q 010932 273 LMDSSLEGQYANEDATQLVELASKCLQYEAKDR-PDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 273 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R-ps~~~ll~~l~~~~~~ 321 (497)
...... ... ..++.+.+++..||+.+|.+| |++.++.+.|+.+...
T Consensus 294 ~~~~~~-~~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 294 KPEGLF-RRL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp EECSCC-TTC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred eechhc-ccc--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 111111 111 135678899999999999999 5888888888777543
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=344.85 Aligned_cols=246 Identities=20% Similarity=0.207 Sum_probs=201.6
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--------hhHHHHHHHHhccC-CCCcceeeeeeeeeCC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--------PHQFVTEAAGLGNV-RHKRLVNLIGCCAEGD 131 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--------~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 131 (497)
..|.+++.||.|+||.||+|.++ +|+.||||++....... .+.+.+|+.+++++ +||||+++++++....
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 34677788899999999999986 59999999987643221 34678999999999 7999999999999999
Q ss_pred ceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcccc
Q 010932 132 ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS 211 (497)
Q Consensus 132 ~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 211 (497)
..++||||++|++|.+++.. ...+++..+..++.||+.||.|||+.| ++|+||||+|||++.+|.+||+|||++...
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~g-i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHANN-IVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 99999999999999999965 467999999999999999999999999 999999999999999999999999998865
Q ss_pred CCC---CccccCCCCCCcccccc------CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCC
Q 010932 212 RDG---KSYSTNLAYTPPEFLRT------GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282 (497)
Q Consensus 212 ~~~---~~~~gt~~y~aPE~~~~------~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (497)
... ....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........... +.........
T Consensus 251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~----i~~~~~~~~~ 326 (365)
T 2y7j_A 251 EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRM----IMEGQYQFSS 326 (365)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHTCCCCCH
T ss_pred CCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHH----HHhCCCCCCC
Confidence 433 34578999999999863 3588899999999999999999998865432221111 0111000000
Q ss_pred --CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 283 --ANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 283 --~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
....+..+.+|+.+||+.||++|||+.+++++
T Consensus 327 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 327 PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 01245679999999999999999999999985
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-42 Score=338.22 Aligned_cols=244 Identities=18% Similarity=0.178 Sum_probs=198.6
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCC-CCcceeeeeeeee--CCceEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR-HKRLVNLIGCCAE--GDERLLVA 137 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~--~~~~~lv~ 137 (497)
+.+.+++.||+|+||+||+|.+. +|+.||||+++.. ..+.+.+|+.+|+.++ ||||+++++++.. ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 56788899999999999999975 5899999999743 3578999999999997 9999999999987 56789999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC-CeeEcccCCccccCCC--
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG-DPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~~-- 214 (497)
||+++++|.+++. .+++..+..++.||+.||.|||+++ ++||||||+|||++.++ .+||+|||+++.....
T Consensus 113 e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~ 186 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 186 (330)
T ss_dssp ECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC
T ss_pred eccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc
Confidence 9999999999883 4899999999999999999999999 99999999999999776 8999999999864433
Q ss_pred -CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHH--H----------------hccc-----
Q 010932 215 -KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDV--I----------------RGKN----- 269 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~--~----------------~~~~----- 269 (497)
....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... . ....
T Consensus 187 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (330)
T 3nsz_A 187 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 266 (330)
T ss_dssp CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCT
T ss_pred cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcccccc
Confidence 34568899999999987 668999999999999999999999874321100 0 0000
Q ss_pred ---------cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 270 ---------LLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 270 ---------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.............+...+..+.+||.+||+.||++|||+.+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 267 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred chhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000000011112223357889999999999999999999999985
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-43 Score=344.68 Aligned_cols=251 Identities=18% Similarity=0.213 Sum_probs=203.8
Q ss_pred CcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCC---h--------------hHHHHHHHHhccCCCCcceeee
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD---P--------------HQFVTEAAGLGNVRHKRLVNLI 124 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~--------------~~~~~e~~~l~~l~h~niv~~~ 124 (497)
..+.+++.||+|+||.||+|.. +|+.||||++....... . +.+.+|+.+++.++||||++++
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 5778889999999999999999 89999999986432111 1 7899999999999999999999
Q ss_pred eeeeeCCceEEEEEcCCCCChhhh------hhcCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCcccccCCCcceEeCCC
Q 010932 125 GCCAEGDERLLVAQYMPNDTLSKH------LFHWDKQPLPWEMRVRVAYYIAQALDHCNS-QNRKLYHDLNAYRVLFDED 197 (497)
Q Consensus 125 ~~~~~~~~~~lv~e~~~~~~L~~~------l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~-~~~iiH~Dlkp~Nill~~~ 197 (497)
+++.+.+..++||||+++++|.++ +.......+++..+..++.||+.||.|||+ ++ ++|+||||+|||++.+
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dl~p~Nil~~~~ 188 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN-ICHRDVKPSNILMDKN 188 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC-EECCCCCGGGEEECTT
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC-EeecCCChHhEEEcCC
Confidence 999999999999999999999998 654446789999999999999999999999 88 9999999999999999
Q ss_pred CCeeEcccCCccccCCC--CccccCCCCCCccccccC-CCCc-ccceeehhhhHHHHhhCCCCCCchhh-HHH----hcc
Q 010932 198 GDPRLSSFGLMKNSRDG--KSYSTNLAYTPPEFLRTG-RVIP-ESVIYSYGTVLLDLLSGKHIPPSHAL-DVI----RGK 268 (497)
Q Consensus 198 ~~~kl~Dfgla~~~~~~--~~~~gt~~y~aPE~~~~~-~~~~-~~Dv~slG~~l~elltg~~~~~~~~~-~~~----~~~ 268 (497)
+.+||+|||++...... ....+|+.|+|||++.+. .++. ++|||||||++|+|++|+.||..... ... ...
T Consensus 189 ~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~ 268 (348)
T 2pml_X 189 GRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTK 268 (348)
T ss_dssp SCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSC
T ss_pred CcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhcc
Confidence 99999999999864333 345789999999999877 6666 99999999999999999998865322 111 111
Q ss_pred ccccccccc-c--------CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 269 NLLLLMDSS-L--------EGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 269 ~~~~~~~~~-~--------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
......... . ........+..+.+|+.+||+.||.+|||+.+++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 269 NIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp CCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000000000 0 000114466789999999999999999999999985
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=334.58 Aligned_cols=245 Identities=16% Similarity=0.159 Sum_probs=200.1
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC----CCChhHHHHHHHHhccCCCCcceeeeeeee--eCCceE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS----WPDPHQFVTEAAGLGNVRHKRLVNLIGCCA--EGDERL 134 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~ 134 (497)
..|.+++.||+|+||.||++... +++.||||++.... ....+.+.+|+.+++.++||||+++++++. +....+
T Consensus 5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (305)
T 2wtk_C 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY 84 (305)
T ss_dssp CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence 56788889999999999999975 58999999996532 233567999999999999999999999984 456789
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
+||||++++ |.+++.......+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++......
T Consensus 85 lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 162 (305)
T 2wtk_C 85 MVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG-IVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162 (305)
T ss_dssp EEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred EEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence 999999876 777776655678999999999999999999999999 999999999999999999999999999765322
Q ss_pred ------CccccCCCCCCccccccCC--CCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHH
Q 010932 215 ------KSYSTNLAYTPPEFLRTGR--VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANED 286 (497)
Q Consensus 215 ------~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (497)
....||+.|+|||++.+.. .+.++|||||||++|+|++|+.||........... +... ....+..+
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----i~~~--~~~~~~~~ 236 (305)
T 2wtk_C 163 AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFEN----IGKG--SYAIPGDC 236 (305)
T ss_dssp CSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH----HHHC--CCCCCSSS
T ss_pred ccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH----HhcC--CCCCCCcc
Confidence 2346789999999998644 47799999999999999999998865433222111 0000 11234456
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 287 ATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 287 ~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+..+.+|+.+||+.||.+|||+.+++++
T Consensus 237 ~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 237 GPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 6789999999999999999999999986
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-43 Score=343.17 Aligned_cols=253 Identities=17% Similarity=0.256 Sum_probs=202.3
Q ss_pred cccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhcc--CCCCcceeeeeeeeeCC----ceEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGN--VRHKRLVNLIGCCAEGD----ERLLV 136 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~----~~~lv 136 (497)
.+.+.+.||+|+||+||+|.+ +|+.||||++... ....+.+|++++.. ++||||+++++++.... ..++|
T Consensus 43 ~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv 118 (342)
T 1b6c_B 43 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 118 (342)
T ss_dssp HCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEE
T ss_pred cEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEE
Confidence 456778889999999999998 5899999999643 34678889998877 78999999999998875 78999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHH--------cCCCcccccCCCcceEeCCCCCeeEcccCCc
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCN--------SQNRKLYHDLNAYRVLFDEDGDPRLSSFGLM 208 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh--------~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 208 (497)
|||+++++|.+++.. ..+++..+..++.||+.||.||| +.+ ++||||||+|||++.++.+||+|||++
T Consensus 119 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 194 (342)
T 1b6c_B 119 SDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA 194 (342)
T ss_dssp ECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred EeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC-eeeCCCCHHHEEECCCCCEEEEECCCc
Confidence 999999999999964 46999999999999999999999 788 999999999999999999999999999
Q ss_pred cccCCC--------CccccCCCCCCccccccC------CCCcccceeehhhhHHHHhhC----------CCCCCchhhHH
Q 010932 209 KNSRDG--------KSYSTNLAYTPPEFLRTG------RVIPESVIYSYGTVLLDLLSG----------KHIPPSHALDV 264 (497)
Q Consensus 209 ~~~~~~--------~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~~l~elltg----------~~~~~~~~~~~ 264 (497)
+..... ....||+.|+|||++.+. .++.++|||||||++|||+|| ..||.......
T Consensus 195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 274 (342)
T 1b6c_B 195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 274 (342)
T ss_dssp EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc
Confidence 754332 334689999999999865 344789999999999999999 55553321000
Q ss_pred Hhcccc-ccccccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcccc
Q 010932 265 IRGKNL-LLLMDSSLEGQYA-----NEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323 (497)
Q Consensus 265 ~~~~~~-~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~ 323 (497)
.....+ ..+.........+ ..++..+.+|+.+||+.||++|||+.+|+++|+.+.++..
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~~ 339 (342)
T 1b6c_B 275 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 339 (342)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHhc
Confidence 000000 0111112222222 3567889999999999999999999999999999976543
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=336.95 Aligned_cols=255 Identities=19% Similarity=0.244 Sum_probs=201.1
Q ss_pred CCCcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
.++.+.+++.||+|+||.||+|.+++ .||+|+++.... ...+.+.+|+.+++.++||||+++++++......++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 35677888999999999999999853 499999875432 23456889999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC----
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD---- 213 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 213 (497)
||+++++|.+++.. ....+++..+..++.||+.||.|||+++ ++||||||+|||++ ++.+||+|||+++....
T Consensus 109 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 109 SLCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAKG-ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp BCCCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHTT-CCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred ecccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 99999999999965 2457999999999999999999999999 99999999999998 78999999999775321
Q ss_pred -----CCccccCCCCCCcccccc---------CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccC
Q 010932 214 -----GKSYSTNLAYTPPEFLRT---------GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLE 279 (497)
Q Consensus 214 -----~~~~~gt~~y~aPE~~~~---------~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (497)
.....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.............. ....
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~----~~~~ 261 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGT----GMKP 261 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHT----TCCC
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcc----CCCC
Confidence 123457899999999874 3578899999999999999999998865433322111100 0011
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcccc
Q 010932 280 GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323 (497)
Q Consensus 280 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~ 323 (497)
...+...+..+.+|+.+||+.||++|||+.++++.|+.+.....
T Consensus 262 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~ 305 (319)
T 2y4i_B 262 NLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305 (319)
T ss_dssp CCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred CCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence 11112345669999999999999999999999999999876543
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=347.68 Aligned_cols=247 Identities=17% Similarity=0.200 Sum_probs=195.0
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeC----------
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG---------- 130 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~---------- 130 (497)
..|.+++.||+|+||+||+|.+. +|+.||||++.... ....+|+.+|+.++||||+++++++...
T Consensus 7 ~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 82 (383)
T 3eb0_A 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP 82 (383)
T ss_dssp TTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred ceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence 45688889999999999999975 59999999986543 2234799999999999999999998543
Q ss_pred ----------------------------CceEEEEEcCCCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHHcCC
Q 010932 131 ----------------------------DERLLVAQYMPNDTLSKHLFH--WDKQPLPWEMRVRVAYYIAQALDHCNSQN 180 (497)
Q Consensus 131 ----------------------------~~~~lv~e~~~~~~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~lh~~~ 180 (497)
...++||||++ ++|.+.+.. .....+++..+..++.||+.||.|||++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g 161 (383)
T 3eb0_A 83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG 161 (383)
T ss_dssp ---------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence 34789999997 577777653 23578999999999999999999999999
Q ss_pred CcccccCCCcceEeC-CCCCeeEcccCCccccCCC---CccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCC
Q 010932 181 RKLYHDLNAYRVLFD-EDGDPRLSSFGLMKNSRDG---KSYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKH 255 (497)
Q Consensus 181 ~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~ 255 (497)
++||||||+|||++ .++.+||+|||+++..... ....+|+.|+|||++.+. .++.++|||||||++|+|++|+.
T Consensus 162 -i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~ 240 (383)
T 3eb0_A 162 -ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP 240 (383)
T ss_dssp -EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred -CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCC
Confidence 99999999999997 6899999999999864333 345779999999998865 48999999999999999999999
Q ss_pred CCCchhhHHHhcccc-----------------------ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 010932 256 IPPSHALDVIRGKNL-----------------------LLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLL 312 (497)
Q Consensus 256 ~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll 312 (497)
||............+ .......+...++...+..+.+|+.+||+.||++|||+.+++
T Consensus 241 pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 320 (383)
T 3eb0_A 241 LFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAM 320 (383)
T ss_dssp SSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred CCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 887543221111000 000001111113344677899999999999999999999999
Q ss_pred HH
Q 010932 313 SA 314 (497)
Q Consensus 313 ~~ 314 (497)
++
T Consensus 321 ~h 322 (383)
T 3eb0_A 321 AH 322 (383)
T ss_dssp TS
T ss_pred cC
Confidence 85
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-42 Score=332.84 Aligned_cols=256 Identities=16% Similarity=0.161 Sum_probs=201.6
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeee-eeCCceEEEEEc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCC-AEGDERLLVAQY 139 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~ 139 (497)
+.+.+++.||+|+||+||+|.+. +++.||||++.... ..+.+.+|+.+++.++|++++..+..+ ......++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 4hgt_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence 34677888899999999999974 58999999876543 234689999999999988877776665 566788999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEe---CCCCCeeEcccCCccccCCC--
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF---DEDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~-- 214 (497)
+ +++|.+++... ...+++..+..++.||+.||.|||+++ ++||||||+|||+ +.++.+||+|||+++.....
T Consensus 87 ~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 163 (296)
T 4hgt_A 87 L-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp C-CCBHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred c-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence 9 99999998642 457999999999999999999999999 9999999999999 78899999999999754332
Q ss_pred ---------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCC---C
Q 010932 215 ---------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQ---Y 282 (497)
Q Consensus 215 ---------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 282 (497)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||........ ............... .
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 242 (296)
T 4hgt_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK-RQKYERISEKKMSTPIEVL 242 (296)
T ss_dssp CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS-SSHHHHHHHHHHHSCHHHH
T ss_pred CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhh-hhhhhhhhcccccchhhhh
Confidence 245689999999999999999999999999999999999998864311100 000000000000000 1
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcccc
Q 010932 283 ANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323 (497)
Q Consensus 283 ~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~~ 323 (497)
....++.+.+|+.+||+.||++|||+.++++.|+.+.....
T Consensus 243 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 243 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 12346789999999999999999999999999998875443
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-43 Score=336.10 Aligned_cols=253 Identities=19% Similarity=0.263 Sum_probs=197.9
Q ss_pred CcccccccCCCCCCcEEEEEEEc--CCc--EEEEEEccCCCCC---ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK--NNR--LVAIKRFSRQSWP---DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~--~~~--~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 134 (497)
..+.+++.||+|+||+||+|.+. ++. .||||+++..... ..+.+.+|+.+++.++||||+++++++.... .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 46788899999999999999863 233 6999999764322 2467899999999999999999999998754 89
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
+||||+++++|.+++... ...+++..+..++.||+.||.|||+++ ++|+||||+|||++.++.+||+|||++......
T Consensus 97 ~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 174 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174 (291)
T ss_dssp EEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred eeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEEcCCCCEEEcccccccccccc
Confidence 999999999999998653 356999999999999999999999999 999999999999999999999999998865433
Q ss_pred C-------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHH
Q 010932 215 K-------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANED 286 (497)
Q Consensus 215 ~-------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (497)
. ...+|+.|+|||++.+..++.++||||||+++|+|++ |+.||........... +.........+..+
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~ 250 (291)
T 1u46_A 175 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK----IDKEGERLPRPEDC 250 (291)
T ss_dssp CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH----HHTSCCCCCCCTTC
T ss_pred ccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHH----HHccCCCCCCCcCc
Confidence 2 2345778999999998889999999999999999999 8888765433222111 11111122334556
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 287 ATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 287 ~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
+..+.+++.+||+.||++|||+.++++.|+.+.+.
T Consensus 251 ~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 251 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 78899999999999999999999999999988653
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-42 Score=337.33 Aligned_cols=248 Identities=17% Similarity=0.227 Sum_probs=198.5
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccC-CCCcceeeeeeeee------CCc
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAE------GDE 132 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~------~~~ 132 (497)
...+.+++.||+|+||.||+|.+. +|+.||||++.... ...+.+.+|+.+++++ +||||+++++++.. ...
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 101 (326)
T 2x7f_A 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 101 (326)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence 345678888999999999999985 58999999997543 3457899999999999 79999999999977 457
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
.++||||+++++|.+++.......+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||++....
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 180 (326)
T 2x7f_A 102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180 (326)
T ss_dssp EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCTTTC---
T ss_pred EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCcHHHEEEcCCCCEEEeeCcCceecC
Confidence 899999999999999997655568999999999999999999999999 9999999999999999999999999987643
Q ss_pred CC----CccccCCCCCCccccc-----cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCC
Q 010932 213 DG----KSYSTNLAYTPPEFLR-----TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA 283 (497)
Q Consensus 213 ~~----~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (497)
.. ....||+.|+|||++. +..++.++|||||||++|+|++|+.||.......... .+.........+
T Consensus 181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~ 256 (326)
T 2x7f_A 181 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF----LIPRNPAPRLKS 256 (326)
T ss_dssp ----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH----HHHHSCCCCCSC
T ss_pred cCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH----HhhcCccccCCc
Confidence 32 3456899999999997 5678999999999999999999998875432221111 011111111122
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 284 NEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 284 ~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
...+..+.+|+.+||+.||.+|||+.+++++
T Consensus 257 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 257 KKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp SCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 3456789999999999999999999999985
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-43 Score=335.46 Aligned_cols=248 Identities=19% Similarity=0.243 Sum_probs=188.2
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
+.+.+++.||+|+||+||++.+. +|+.||||++....... .+.+.++...++.++||||+++++++.+.+..++|||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 86 (290)
T 3fme_A 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 86 (290)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEE
T ss_pred HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEe
Confidence 46788899999999999999975 59999999997543222 2234555556888899999999999999999999999
Q ss_pred cCCCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCcccccCCCcceEeCCCCCeeEcccCCccccCCC-
Q 010932 139 YMPNDTLSKHLFH--WDKQPLPWEMRVRVAYYIAQALDHCNSQ-NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG- 214 (497)
Q Consensus 139 ~~~~~~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~lh~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 214 (497)
|++ ++|.+++.. .....+++..+..++.||+.||.|||++ + ++||||||+|||++.++.+||+|||+++.....
T Consensus 87 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 164 (290)
T 3fme_A 87 LMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV 164 (290)
T ss_dssp CCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC-CCCCCCSGGGCEECTTCCEEBCCC----------
T ss_pred hhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecCCcccccccc
Confidence 997 588777643 1356899999999999999999999998 8 999999999999999999999999999765433
Q ss_pred --CccccCCCCCCcccc----ccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHH
Q 010932 215 --KSYSTNLAYTPPEFL----RTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288 (497)
Q Consensus 215 --~~~~gt~~y~aPE~~----~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (497)
....||+.|+|||++ .+..++.++|||||||++|+|++|+.||.......... ............+...+.
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 241 (290)
T 3fme_A 165 AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL---KQVVEEPSPQLPADKFSA 241 (290)
T ss_dssp -----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHH---HHHHHSCCCCCCTTTSCH
T ss_pred cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHH---HHHhccCCCCcccccCCH
Confidence 234689999999996 45678999999999999999999999886432111111 111111111122334667
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+.+|+.+||+.||++|||+.+++++
T Consensus 242 ~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 242 EFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 89999999999999999999999984
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=334.42 Aligned_cols=251 Identities=17% Similarity=0.158 Sum_probs=205.6
Q ss_pred cCCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC---------hhHHHHHHHHhccCC-CCcceeeeeee
Q 010932 59 NGFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD---------PHQFVTEAAGLGNVR-HKRLVNLIGCC 127 (497)
Q Consensus 59 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---------~~~~~~e~~~l~~l~-h~niv~~~~~~ 127 (497)
.-+..+.+++.||+|+||.||+|.++ +|+.||||++....... .+.+.+|+.++++++ ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34567888899999999999999986 48999999997543211 346889999999996 99999999999
Q ss_pred eeCCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCC
Q 010932 128 AEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGL 207 (497)
Q Consensus 128 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 207 (497)
......++||||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++|+||||+||+++.++.+||+|||+
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEcCCCcEEEecccc
Confidence 999999999999999999999975 467999999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCC---CccccCCCCCCccccc------cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccccccccc
Q 010932 208 MKNSRDG---KSYSTNLAYTPPEFLR------TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSL 278 (497)
Q Consensus 208 a~~~~~~---~~~~gt~~y~aPE~~~------~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (497)
+...... ....+|+.|+|||++. ...++.++||||||+++|+|++|+.||............... ....
T Consensus 171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~ 248 (298)
T 1phk_A 171 SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG--NYQF 248 (298)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--CCCC
T ss_pred hhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcC--Cccc
Confidence 9865433 3456889999999985 456889999999999999999999988654332221110000 0011
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 279 EGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 279 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
........+..+.+|+.+||+.||++|||+.+++++
T Consensus 249 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 249 GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred CcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 111223567789999999999999999999999974
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=344.85 Aligned_cols=258 Identities=17% Similarity=0.202 Sum_probs=196.7
Q ss_pred HHHHHHHhcCCCcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCC-----------hhHHHHHHHHhccCCCCc
Q 010932 51 LADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD-----------PHQFVTEAAGLGNVRHKR 119 (497)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~n 119 (497)
..++....+.| .+++.||+|+||.||+|...+|..||||++....... .+.+.+|+.+|+.++|||
T Consensus 14 ~~~~~~~~~~y---~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 90 (362)
T 3pg1_A 14 IAELHAMQSPY---TVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPN 90 (362)
T ss_dssp HHHHHHTTCSC---EEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTT
T ss_pred HHHHHHhccce---EEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcC
Confidence 45555555554 6777889999999999998889999999986543222 267999999999999999
Q ss_pred ceeeeeeeeeC-----CceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEe
Q 010932 120 LVNLIGCCAEG-----DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194 (497)
Q Consensus 120 iv~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill 194 (497)
|+++++++... ...++||||+. ++|.+++.. ....+++..+..++.||+.||.|||+++ ++||||||+|||+
T Consensus 91 iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 91 ILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEAG-VVHRDLHPGNILL 167 (362)
T ss_dssp BCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEE
T ss_pred ccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCc-CEecCCChHHEEE
Confidence 99999998543 35799999997 678888764 3557999999999999999999999999 9999999999999
Q ss_pred CCCCCeeEcccCCccccCCC---CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccc
Q 010932 195 DEDGDPRLSSFGLMKNSRDG---KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNL 270 (497)
Q Consensus 195 ~~~~~~kl~Dfgla~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~ 270 (497)
+.++.+||+|||+++..... ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.............
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~ 247 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247 (362)
T ss_dssp CTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred cCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99999999999999754332 34568899999999987 678999999999999999999999886543211111000
Q ss_pred -------------------ccccccccC-------CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 271 -------------------LLLMDSSLE-------GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 271 -------------------~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
......... ...++..++.+.+|+.+||+.||++|||+.+++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 000000000 01122346679999999999999999999999985
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=344.04 Aligned_cols=247 Identities=19% Similarity=0.239 Sum_probs=195.9
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCce-----
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER----- 133 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~----- 133 (497)
..|.+++.||+|+||+||+|.+. +|+.||||++....... .+.+.+|+.+++.++||||+++++++...+..
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 35677888999999999999976 49999999997643322 46788999999999999999999999877654
Q ss_pred -EEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 134 -LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 134 -~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
++||||+. ++|.+.+ ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++...
T Consensus 122 ~~lv~e~~~-~~l~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIM----GMEFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp CEEEEECCC-EEHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred EEEEEcccc-ccHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 99999996 6888877 446999999999999999999999999 9999999999999999999999999998654
Q ss_pred CC-CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc-------------------
Q 010932 213 DG-KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL------------------- 271 (497)
Q Consensus 213 ~~-~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~------------------- 271 (497)
.. ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||..............
T Consensus 196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 275 (371)
T 4exu_A 196 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 275 (371)
T ss_dssp ----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHH
T ss_pred cCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhh
Confidence 43 44678999999999987 6789999999999999999999998865432111110000
Q ss_pred ---cccccccCC---CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 272 ---LLMDSSLEG---QYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 272 ---~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..+...... ...+..++.+.+|+.+||+.||++|||+.+++++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 276 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 000000000 0112346789999999999999999999999986
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-42 Score=337.56 Aligned_cols=251 Identities=22% Similarity=0.269 Sum_probs=201.1
Q ss_pred CcccccccCCCCCCcEEEEEEEc--CCcEEEEEEccCCCC--CChhHHHHHHHHhccC---CCCcceeeeeeee-----e
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK--NNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNV---RHKRLVNLIGCCA-----E 129 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~~~~~~~-----~ 129 (497)
..|.+++.||+|+||+||+|.+. +|+.||||++..... .....+.+|+.+++.+ +||||+++++++. .
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~ 90 (326)
T 1blx_A 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 90 (326)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCC
Confidence 35678889999999999999983 588999999864322 2234677888887766 8999999999987 4
Q ss_pred CCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 130 GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 130 ~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
....++||||++ ++|.+++.......+++..+..++.||+.||.|||++| ++|+||||+|||++.++.+||+|||+++
T Consensus 91 ~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g-i~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 91 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred CceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 567899999997 69999997765667999999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc---------------
Q 010932 210 NSRDG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL--------------- 271 (497)
Q Consensus 210 ~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~--------------- 271 (497)
..... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||..............
T Consensus 169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 248 (326)
T 1blx_A 169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248 (326)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccc
Confidence 65432 345679999999999999999999999999999999999998865432211100000
Q ss_pred ---ccc---ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 272 ---LLM---DSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 272 ---~~~---~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
... ............+..+.+|+.+||+.||++|||+.+++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000 0000111234466789999999999999999999999975
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=337.42 Aligned_cols=244 Identities=20% Similarity=0.183 Sum_probs=195.0
Q ss_pred cccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCC--------CChhHHHHHHHHhccCCCCcceeeeeeeeeCCce
Q 010932 63 SELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSW--------PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 133 (497)
.|.+++.||+|+||.||+|.+.. |+.||||++..... .....+.+|+.+|+.++||||+++++++.... .
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~ 89 (322)
T 2ycf_A 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-Y 89 (322)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-E
T ss_pred ceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-e
Confidence 46788889999999999999764 89999999875421 12345889999999999999999999987654 8
Q ss_pred EEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCC---eeEcccCCccc
Q 010932 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGD---PRLSSFGLMKN 210 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfgla~~ 210 (497)
++||||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++. +||+|||+++.
T Consensus 90 ~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 166 (322)
T 2ycf_A 90 YIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166 (322)
T ss_dssp EEEEECCTTEETHHHHST--TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSSSCCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEecCCCCCeEEEccCcccee
Confidence 999999999999998864 568999999999999999999999999 999999999999987654 99999999987
Q ss_pred cCCCC---ccccCCCCCCccccc---cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCC---
Q 010932 211 SRDGK---SYSTNLAYTPPEFLR---TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQ--- 281 (497)
Q Consensus 211 ~~~~~---~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 281 (497)
..... ...||+.|+|||++. ...++.++|||||||++|+|++|..||....... .+...+.......
T Consensus 167 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~ 242 (322)
T 2ycf_A 167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV----SLKDQITSGKYNFIPE 242 (322)
T ss_dssp CCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS----CHHHHHHHTCCCCCHH
T ss_pred cccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH----HHHHHHHhCccccCch
Confidence 65442 346899999999974 4668999999999999999999999885432110 0000010000000
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 282 YANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 282 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.....+..+.+|+.+||+.||++|||+.+++++
T Consensus 243 ~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 112346789999999999999999999999985
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-42 Score=352.33 Aligned_cols=253 Identities=17% Similarity=0.168 Sum_probs=202.4
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCC-CcceeeeeeeeeCCceEEEEEc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRH-KRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~ 139 (497)
..|.+++.||+|+||.||+|.+. +|+.||||++..... ..++.+|+++++.++| ++|+.+..++......+|||||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 45688889999999999999974 599999999875432 3468999999999986 5566666667778889999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEe---CCCCCeeEcccCCccccCCC--
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF---DEDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~-- 214 (497)
+ +++|.+++... ...+++..++.|+.||+.||.|||+++ |+||||||+|||| +.++.+||+|||+++.....
T Consensus 85 ~-g~sL~~ll~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (483)
T 3sv0_A 85 L-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST 161 (483)
T ss_dssp C-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred C-CCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence 9 99999999642 567999999999999999999999999 9999999999999 58899999999999854332
Q ss_pred ---------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccC---CCC
Q 010932 215 ---------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLE---GQY 282 (497)
Q Consensus 215 ---------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 282 (497)
....||+.|+|||++.+..++.++|||||||+||||++|+.||.......... .+..+...... ...
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~-~~~~i~~~~~~~~~~~l 240 (483)
T 3sv0_A 162 HQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQ-KYEKISEKKVATSIEAL 240 (483)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHH-HHHHHHHHHHHSCHHHH
T ss_pred ccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHH-HHHHHhhccccccHHHH
Confidence 24578999999999999999999999999999999999999886532110000 00000000000 011
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 283 ANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 283 ~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
...++.++.+|+.+||+.||++||++.+|++.|+.+..
T Consensus 241 ~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 241 CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 12345679999999999999999999999999988854
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-42 Score=349.06 Aligned_cols=246 Identities=23% Similarity=0.238 Sum_probs=191.8
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeC------CceEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG------DERLL 135 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~l 135 (497)
.|.+++.||+|+||+||+|.+. +|+.||||++.... ..+.+|+++|+.++|||||++++++... ...++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 4677888999999999999986 49999999986532 2245799999999999999999998542 13679
Q ss_pred EEEcCCCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC-CCeeEcccCCccccC
Q 010932 136 VAQYMPNDTLSKHLFH--WDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED-GDPRLSSFGLMKNSR 212 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~ 212 (497)
||||+++ +|.+.+.. .....+++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++...
T Consensus 131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 9999975 56655532 23568999999999999999999999999 9999999999999965 568999999998643
Q ss_pred CC---CccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc----------ccccc--
Q 010932 213 DG---KSYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL----------LLMDS-- 276 (497)
Q Consensus 213 ~~---~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~----------~~~~~-- 276 (497)
.. ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||............+. ....+
T Consensus 209 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~ 288 (420)
T 1j1b_A 209 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 288 (420)
T ss_dssp TTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCC
T ss_pred cCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhh
Confidence 32 346789999999999765 689999999999999999999999876432111000000 00000
Q ss_pred ------cc-----CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 277 ------SL-----EGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 277 ------~~-----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.. ...++...+.++.+||.+||+.||.+|||+.+++++
T Consensus 289 ~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 289 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp CCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 00 001223456789999999999999999999999986
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=344.40 Aligned_cols=247 Identities=21% Similarity=0.248 Sum_probs=197.2
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC-hhHHHHHHHHhccCCCCcceeeeeeeeeC-----CceEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEG-----DERLL 135 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~l 135 (497)
.|.+++.||+|+||+||++.+. +++.||||++....... .+.+.+|+++|++++||||+++++++... ...++
T Consensus 28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i 107 (364)
T 3qyz_A 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107 (364)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence 5788889999999999999976 58899999997543222 36789999999999999999999999765 36899
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG- 214 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 214 (497)
||||+. ++|.+++.. ..+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 108 v~e~~~-~~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 182 (364)
T 3qyz_A 108 VQDLME-TDLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182 (364)
T ss_dssp EEECCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred EEcccC-cCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence 999996 589998854 56999999999999999999999999 999999999999999999999999999854422
Q ss_pred ------CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccc---------------
Q 010932 215 ------KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLL--------------- 272 (497)
Q Consensus 215 ------~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~--------------- 272 (497)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...............
T Consensus 183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 262 (364)
T 3qyz_A 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262 (364)
T ss_dssp CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCH
T ss_pred CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhh
Confidence 34578999999998764 45899999999999999999999988654221111000000
Q ss_pred ----c-cccccCCC-----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 273 ----L-MDSSLEGQ-----YANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 273 ----~-~~~~~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
. ........ ..+..+..+.+|+.+||+.||++|||+.+++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 00000000 112346779999999999999999999999986
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-42 Score=338.90 Aligned_cols=247 Identities=15% Similarity=0.138 Sum_probs=174.6
Q ss_pred cccccc-cCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeee----CCceEEE
Q 010932 63 SELIVS-ESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE----GDERLLV 136 (497)
Q Consensus 63 ~~~~~~-~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv 136 (497)
.|.+++ .||+|+||+||+|.++ +|+.||||++... ..........++.+.||||+++++++.. ....++|
T Consensus 29 ~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 104 (336)
T 3fhr_A 29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLII 104 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred eeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEE
Confidence 456655 4899999999999986 5999999999642 1222233334566789999999999976 4458999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC---CCCeeEcccCCccccCC
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE---DGDPRLSSFGLMKNSRD 213 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~~ 213 (497)
|||+++|+|.+++.......+++..+..++.||+.||.|||+++ ++||||||+|||++. ++.+||+|||+++....
T Consensus 105 ~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~-ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~ 183 (336)
T 3fhr_A 105 MECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN-IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ 183 (336)
T ss_dssp EECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred EeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence 99999999999998755568999999999999999999999999 999999999999986 45699999999986543
Q ss_pred C--CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccc--cccCCCCCHHHHHH
Q 010932 214 G--KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMD--SSLEGQYANEDATQ 289 (497)
Q Consensus 214 ~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 289 (497)
. ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.................. ...........+..
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (336)
T 3fhr_A 184 NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSED 263 (336)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHH
T ss_pred cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHH
Confidence 3 3456799999999999889999999999999999999999988654332221111111111 11111222356778
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 290 LVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 290 l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+.+|+.+||+.||++|||+.+++++
T Consensus 264 ~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 264 AKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHCCCChhHCcCHHHHhcC
Confidence 9999999999999999999999985
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-42 Score=337.41 Aligned_cols=247 Identities=19% Similarity=0.235 Sum_probs=196.0
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCc------
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE------ 132 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~------ 132 (497)
..|.+.+.||+|+||.||+|.+. +|+.||||++....... .+.+.+|+.+++.++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 45677888999999999999976 59999999997643222 3578899999999999999999999987654
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
.++||||+. ++|.+++ ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++...
T Consensus 104 ~~lv~e~~~-~~l~~~~----~~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIM----GLKFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp CEEEEECCS-EEGGGTT----TSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred EEEEecccc-CCHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 499999997 6888877 346999999999999999999999999 9999999999999999999999999998654
Q ss_pred CC-CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccc--------------------
Q 010932 213 DG-KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNL-------------------- 270 (497)
Q Consensus 213 ~~-~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~-------------------- 270 (497)
.. ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.............
T Consensus 178 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 257 (353)
T 3coi_A 178 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 257 (353)
T ss_dssp ------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHH
T ss_pred CCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHH
Confidence 33 34578999999999987 678999999999999999999999886543211100000
Q ss_pred --ccccccc---cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 271 --LLLMDSS---LEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 271 --~~~~~~~---~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
...+... .........+..+.+|+.+||+.||++|||+.+++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 258 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000000 0112234567889999999999999999999999986
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-42 Score=337.32 Aligned_cols=249 Identities=17% Similarity=0.191 Sum_probs=203.4
Q ss_pred CcccccccCCCCCCcEEEEEEE-c-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCc------ceeeeeeeeeCCce
Q 010932 62 SSELIVSESGDKAPNVVYRGRL-K-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKR------LVNLIGCCAEGDER 133 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~-~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~~~ 133 (497)
..|.+++.||+|+||+||++.+ . +|+.||||+++... ...+.+.+|+.+++.++|++ |+++++++...+..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 4678889999999999999997 3 58899999997432 22467889999999887654 99999999999999
Q ss_pred EEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC-----------------
Q 010932 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE----------------- 196 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~----------------- 196 (497)
++||||+ +++|.+++.......+++..+..++.||+.||.|||+++ ++||||||+|||++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK-LTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 9999999 899999997755567999999999999999999999999 999999999999987
Q ss_pred --CCCeeEcccCCccccCCC-CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccc
Q 010932 197 --DGDPRLSSFGLMKNSRDG-KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLL 273 (497)
Q Consensus 197 --~~~~kl~Dfgla~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~ 273 (497)
++.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||++|..||+.......... +...
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~-~~~~ 249 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAM-MERI 249 (339)
T ss_dssp ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHH-HHHH
T ss_pred ccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHH-HHHH
Confidence 678999999999865443 456789999999999998999999999999999999999998875432211100 0000
Q ss_pred c--------------------------------------cc-ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 274 M--------------------------------------DS-SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 274 ~--------------------------------------~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
. .. ......+...++.+.+|+.+||+.||.+|||+.+++++
T Consensus 250 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 250 LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp HCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred hCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcC
Confidence 0 00 00011234567889999999999999999999999975
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=346.54 Aligned_cols=247 Identities=21% Similarity=0.240 Sum_probs=192.4
Q ss_pred cccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCc------eEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE------RLLV 136 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~------~~lv 136 (497)
.|.+++.||+|+||+||+|.+..+..||+|++..... ...+|+++|+.++||||+++++++..... .++|
T Consensus 41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv 116 (394)
T 4e7w_A 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116 (394)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred eEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence 5778889999999999999997766799998864322 23479999999999999999999965443 7899
Q ss_pred EEcCCCCChhhhhh-cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC-CCCCeeEcccCCccccCCC
Q 010932 137 AQYMPNDTLSKHLF-HWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD-EDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 137 ~e~~~~~~L~~~l~-~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~~ 214 (497)
|||++++.+..... ......+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 117 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~ 195 (394)
T 4e7w_A 117 LEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG-ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG 195 (394)
T ss_dssp EECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred eeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC
Confidence 99998654433321 112568999999999999999999999999 99999999999999 7999999999999864332
Q ss_pred ---CccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc---------------cccc
Q 010932 215 ---KSYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL---------------LLMD 275 (497)
Q Consensus 215 ---~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~---------------~~~~ 275 (497)
....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.............. ....
T Consensus 196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~ 275 (394)
T 4e7w_A 196 EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYME 275 (394)
T ss_dssp CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSS
T ss_pred CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhh
Confidence 356789999999999765 589999999999999999999999876432111100000 0000
Q ss_pred c--------ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 276 S--------SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 276 ~--------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
. .+...++...++++.+|+.+||+.||.+|||+.++++|
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 276 HKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp SCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 0 00011223356789999999999999999999999986
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-42 Score=336.42 Aligned_cols=252 Identities=18% Similarity=0.235 Sum_probs=181.4
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHH-HhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAA-GLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
...+.+++.||+|+||.||+|.+. +|+.||||++...... ....+..|+. +++.++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 356788889999999999999986 5999999999764322 2345666666 778889999999999999999999999
Q ss_pred EcCCCCChhhhhhc---CCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCcccccCCCcceEeCCCCCeeEcccCCccccCC
Q 010932 138 QYMPNDTLSKHLFH---WDKQPLPWEMRVRVAYYIAQALDHCNSQ-NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD 213 (497)
Q Consensus 138 e~~~~~~L~~~l~~---~~~~~l~~~~~~~i~~~i~~~L~~lh~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 213 (497)
||+++ +|.+++.. .....+++..+..++.|++.||.|||+. + ++||||||+|||++.++.+||+|||+++....
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS-CCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC-EeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 99975 77777642 2356899999999999999999999998 8 99999999999999999999999999986543
Q ss_pred C---CccccCCCCCCcccc----ccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHH
Q 010932 214 G---KSYSTNLAYTPPEFL----RTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANED 286 (497)
Q Consensus 214 ~---~~~~gt~~y~aPE~~----~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (497)
. ....||+.|+|||++ .+..++.++|||||||++|+|++|+.||..................+..........
T Consensus 179 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (327)
T 3aln_A 179 SIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREF 258 (327)
T ss_dssp ---------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCC
T ss_pred ccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccC
Confidence 3 234689999999998 456789999999999999999999998865322111111111111111111122346
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 287 ATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 287 ~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+..+.+|+.+||+.||++|||+.+++++
T Consensus 259 ~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 259 SPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 6789999999999999999999999985
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=337.06 Aligned_cols=248 Identities=19% Similarity=0.227 Sum_probs=197.2
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeC-----CceE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEG-----DERL 134 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~ 134 (497)
+.+.+++.||+|+||+||+|.+. +|+.||||++...... ....+.+|+.+++.++||||+++++++... ...+
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 45678888999999999999986 5899999999654321 235688999999999999999999988664 6789
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 214 (497)
+||||+. ++|.+++.. ..+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 91 lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (353)
T 2b9h_A 91 IIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSN-VIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165 (353)
T ss_dssp EEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEcCCCcEEEEecccccccccc
Confidence 9999996 689998864 57999999999999999999999999 999999999999999999999999999754321
Q ss_pred --------------CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccc---------
Q 010932 215 --------------KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNL--------- 270 (497)
Q Consensus 215 --------------~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~--------- 270 (497)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.............
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
T 2b9h_A 166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245 (353)
T ss_dssp --------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCST
T ss_pred cccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchh
Confidence 12467899999998765 678999999999999999999999886543221100000
Q ss_pred -----------ccccccc-cCC-----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 271 -----------LLLMDSS-LEG-----QYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 271 -----------~~~~~~~-~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
....... ... ...+..+..+.+|+.+||+.||++|||+.+++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp TTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000000 000 0112456789999999999999999999999985
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-42 Score=366.83 Aligned_cols=251 Identities=20% Similarity=0.255 Sum_probs=206.1
Q ss_pred CcccccccCCCCCCcEEEEEEEcC----CcEEEEEEccCCCCCC-hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN----NRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
..+.+.+.||+|+||+||+|.+.. +..||||++....... .+.+.+|+.+|++++||||+++++++. .+..++|
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv 468 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 468 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEE
Confidence 456778889999999999999743 5689999987543222 367999999999999999999999985 4678999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK- 215 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 215 (497)
|||+++|+|.+++... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++......
T Consensus 469 ~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~ 546 (656)
T 2j0j_A 469 MELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 546 (656)
T ss_dssp EECCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---
T ss_pred EEcCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchHhEEEeCCCCEEEEecCCCeecCCCcc
Confidence 9999999999999753 457999999999999999999999999 9999999999999999999999999998654432
Q ss_pred ----ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHH
Q 010932 216 ----SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290 (497)
Q Consensus 216 ----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (497)
...+|+.|+|||++.+..++.++|||||||++|||++ |..||.......... .+........+..++..+
T Consensus 547 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~-----~i~~~~~~~~~~~~~~~l 621 (656)
T 2j0j_A 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-----RIENGERLPMPPNCPPTL 621 (656)
T ss_dssp -------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH-----HHHHTCCCCCCTTCCHHH
T ss_pred eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHH-----HHHcCCCCCCCccccHHH
Confidence 2345678999999998999999999999999999997 887776543222111 111112233456677889
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 291 VELASKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 291 ~~li~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
.+|+.+||+.||++|||+.++++.|+.+..
T Consensus 622 ~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 622 YSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999998864
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-42 Score=330.95 Aligned_cols=245 Identities=19% Similarity=0.242 Sum_probs=193.4
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeee------------
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE------------ 129 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------------ 129 (497)
.+.+++.||+|+||+||+|... +|+.||||++.... ...+.+.+|+.+++.++||||+++++++.+
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 85 (303)
T 1zy4_A 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK 85 (303)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------
T ss_pred cchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccc
Confidence 4577888899999999999975 59999999996432 234678999999999999999999998865
Q ss_pred -CCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCc
Q 010932 130 -GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLM 208 (497)
Q Consensus 130 -~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 208 (497)
....++||||+++++|.+++.. ....+++..+..++.||+.||.|||+++ ++|+||||+|||++.++.+||+|||++
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~ 163 (303)
T 1zy4_A 86 KKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDFGLA 163 (303)
T ss_dssp CEEEEEEEEECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCCC
T ss_pred cCCceEEEEecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhCC-eecccCCHHhEEEcCCCCEEEeeCcch
Confidence 3467999999999999999975 2457889999999999999999999999 999999999999999999999999998
Q ss_pred cccCCC------------------CccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccc
Q 010932 209 KNSRDG------------------KSYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKN 269 (497)
Q Consensus 209 ~~~~~~------------------~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~ 269 (497)
...... ....||+.|+|||++.+. .++.++|||||||++|+|++ |+............
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~ 240 (303)
T 1zy4_A 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKK 240 (303)
T ss_dssp SCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHH
T ss_pred hhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHh
Confidence 754321 234578999999999864 68999999999999999998 33322111100000
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 270 LLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+ ..........++...+..+.+|+.+||+.||.+|||+.+++++
T Consensus 241 ~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 241 L-RSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp H-HSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred c-cccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 1 0111122333455567789999999999999999999999986
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-42 Score=344.18 Aligned_cols=243 Identities=17% Similarity=0.233 Sum_probs=178.9
Q ss_pred ccCCCCCCcEEEEEEEc---CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeee--CCceEEEEEcCCC
Q 010932 68 SESGDKAPNVVYRGRLK---NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE--GDERLLVAQYMPN 142 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~ 142 (497)
++||+|+||+||+|.++ +++.||||++.... ....+.+|+.+|+.++||||+++++++.. ....++||||+.
T Consensus 27 ~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~- 103 (405)
T 3rgf_A 27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE- 103 (405)
T ss_dssp CCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS-
T ss_pred cEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC-
Confidence 36899999999999975 47899999997543 34578999999999999999999999955 668999999996
Q ss_pred CChhhhhhcC-------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEe----CCCCCeeEcccCCcccc
Q 010932 143 DTLSKHLFHW-------DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF----DEDGDPRLSSFGLMKNS 211 (497)
Q Consensus 143 ~~L~~~l~~~-------~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfgla~~~ 211 (497)
++|.+++... ....+++..++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++..
T Consensus 104 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~ 182 (405)
T 3rgf_A 104 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182 (405)
T ss_dssp EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECCSSTTTTCEEECCTTCCC--
T ss_pred CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeCCCcCHHHeEEecCCCCCCcEEEEECCCceec
Confidence 5787777521 1235999999999999999999999999 9999999999999 67899999999999865
Q ss_pred CCC-------CccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc--------ccccccc
Q 010932 212 RDG-------KSYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK--------NLLLLMD 275 (497)
Q Consensus 212 ~~~-------~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~--------~~~~~~~ 275 (497)
... ....||+.|+|||++.+. .++.++|||||||++|+|++|+.||........... .+...+.
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g 262 (405)
T 3rgf_A 183 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 262 (405)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHC
T ss_pred CCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhC
Confidence 432 345789999999999874 589999999999999999999998854322110000 0000000
Q ss_pred ------------------------cccCCCC---------CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 276 ------------------------SSLEGQY---------ANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 276 ------------------------~~~~~~~---------~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
....... ....+..+.+||.+||+.||.+|||+.++|++
T Consensus 263 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 263 FPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp CCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000 00114578899999999999999999999986
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-42 Score=335.21 Aligned_cols=248 Identities=19% Similarity=0.212 Sum_probs=192.3
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeee------------
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA------------ 128 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~------------ 128 (497)
+.|.+++.||+|+||.||+|.+.. |+.||||++........+.+.+|+.+++.++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 467888999999999999999865 9999999997654444567999999999999999999999873
Q ss_pred --eCCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC-CCCCeeEccc
Q 010932 129 --EGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD-EDGDPRLSSF 205 (497)
Q Consensus 129 --~~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~-~~~~~kl~Df 205 (497)
.....++||||++ ++|.+++. .+.+++..+..++.||+.||.|||+++ ++||||||+|||++ .++.+||+||
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTTEEEECCC
T ss_pred ccccCceeEEeeccC-CCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCeEEEccC
Confidence 3467899999997 69999984 467999999999999999999999999 99999999999997 5679999999
Q ss_pred CCccccCCC-------CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccc-----
Q 010932 206 GLMKNSRDG-------KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLL----- 272 (497)
Q Consensus 206 gla~~~~~~-------~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~----- 272 (497)
|+++..... ....+|+.|+|||.+.+ ..++.++|||||||++|+|++|+.||...............
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (320)
T 2i6l_A 166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVH 245 (320)
T ss_dssp TTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCC
T ss_pred ccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCc
Confidence 999865321 23456889999998875 67899999999999999999999988654322111000000
Q ss_pred -------------ccccccC-C-----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 273 -------------LMDSSLE-G-----QYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 273 -------------~~~~~~~-~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+..... . ...+..+..+.+|+.+||+.||++|||+.+++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 246 EEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 0000000 0 0112356789999999999999999999999985
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=337.23 Aligned_cols=250 Identities=20% Similarity=0.221 Sum_probs=186.2
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCc-------e
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE-------R 133 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-------~ 133 (497)
+.+.+++.||+|+||+||+|.+. +|+.||||++.... .....+.++++.+..++||||+++++++..... .
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~ 101 (360)
T 3e3p_A 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYL 101 (360)
T ss_dssp TTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEE
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeE
Confidence 45678888999999999999986 58999999986543 234567888999999999999999999976443 7
Q ss_pred EEEEEcCCCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHH--cCCCcccccCCCcceEeCC-CCCeeEcccCCc
Q 010932 134 LLVAQYMPNDTLSKHLFH--WDKQPLPWEMRVRVAYYIAQALDHCN--SQNRKLYHDLNAYRVLFDE-DGDPRLSSFGLM 208 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~lh--~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla 208 (497)
++||||++++ |...+.. .....+++..+..++.||+.||.||| +++ ++||||||+|||++. ++.+||+|||++
T Consensus 102 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~-ivH~Dlkp~NIll~~~~~~~kl~Dfg~a 179 (360)
T 3e3p_A 102 NVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSA 179 (360)
T ss_dssp EEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC-CBCSCCCGGGEEEETTTTEEEECCCTTC
T ss_pred EEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC-eecCcCCHHHEEEeCCCCcEEEeeCCCc
Confidence 8999999764 5444332 23567899999999999999999999 888 999999999999996 899999999999
Q ss_pred cccCCC---CccccCCCCCCccccccCC-CCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccc----------cc
Q 010932 209 KNSRDG---KSYSTNLAYTPPEFLRTGR-VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLL----------LM 274 (497)
Q Consensus 209 ~~~~~~---~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~----------~~ 274 (497)
+..... ....||+.|+|||++.+.. ++.++|||||||++|+|++|+.||............... .+
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (360)
T 3e3p_A 180 KKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKL 259 (360)
T ss_dssp BCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred eecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhc
Confidence 865443 3456799999999997654 899999999999999999999988654322111110000 00
Q ss_pred c----------------cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 275 D----------------SSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 275 ~----------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
. .......+...+..+.+|+.+||+.||.+|||+.+++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp CTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0 000111222357789999999999999999999999985
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-42 Score=332.63 Aligned_cols=246 Identities=19% Similarity=0.258 Sum_probs=199.1
Q ss_pred CcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCC--ChhHHHHHHHHhccCC--CCcceeeeeeeeeCCceEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVR--HKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv~ 137 (497)
..|.+++.||+|+||.||++...+|+.||||++...... ..+.+.+|+.++++++ ||||+++++++......++||
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 107 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 107 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEE
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEE
Confidence 457888899999999999999888999999999754332 2467899999999997 599999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 214 (497)
| +.+++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++ ++.+||+|||+++.....
T Consensus 108 e-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~ 182 (313)
T 3cek_A 108 E-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 182 (313)
T ss_dssp C-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEE-TTEEEECCCSSSCC-------
T ss_pred e-cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEEE-CCeEEEeeccccccccCcccc
Confidence 9 568899999976 467999999999999999999999999 99999999999996 489999999999865432
Q ss_pred ---CccccCCCCCCcccccc-----------CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCC
Q 010932 215 ---KSYSTNLAYTPPEFLRT-----------GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEG 280 (497)
Q Consensus 215 ---~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (497)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........ ......+.....
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~ 259 (313)
T 3cek_A 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAIIDPNHEI 259 (313)
T ss_dssp -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---HHHHHHCTTSCC
T ss_pred ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH---HHHHHHhccccc
Confidence 23468999999999875 4688899999999999999999998854321111 111222333333
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010932 281 QYANEDATQLVELASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 281 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l 315 (497)
.++...+..+.+|+.+||+.||++|||+.+++++-
T Consensus 260 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 260 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred CCcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 34444567899999999999999999999999863
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-42 Score=334.92 Aligned_cols=240 Identities=21% Similarity=0.304 Sum_probs=201.8
Q ss_pred CCCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC------ChhHHHHHHHHhccCC--CCcceeeeeeeeeC
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP------DPHQFVTEAAGLGNVR--HKRLVNLIGCCAEG 130 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~ 130 (497)
-.+.+.+++.||+|+||+||+|... +|+.||||++...... ..+.+.+|+.++++++ ||||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 3456788899999999999999975 5899999999754322 2356788999999996 59999999999999
Q ss_pred CceEEEEEcCCC-CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC-CCCCeeEcccCCc
Q 010932 131 DERLLVAQYMPN-DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD-EDGDPRLSSFGLM 208 (497)
Q Consensus 131 ~~~~lv~e~~~~-~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfgla 208 (497)
+..++|||++.+ ++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++ .++.+||+|||++
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~kL~Dfg~~ 197 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSG 197 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred CcEEEEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence 999999999976 899999875 467999999999999999999999999 99999999999999 7899999999999
Q ss_pred cccCCC--CccccCCCCCCccccccCCC-CcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHH
Q 010932 209 KNSRDG--KSYSTNLAYTPPEFLRTGRV-IPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANE 285 (497)
Q Consensus 209 ~~~~~~--~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (497)
+..... ....||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... .... ...+..
T Consensus 198 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~-----------~~~~~~ 265 (320)
T 3a99_A 198 ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IRGQ-----------VFFRQR 265 (320)
T ss_dssp EECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH-HHCC-----------CCCSSC
T ss_pred cccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh-hccc-----------cccccc
Confidence 865443 34568999999999987765 78899999999999999999888654211 1110 112234
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 286 DATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 286 ~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+..+.+|+.+||+.||++|||+.+++++
T Consensus 266 ~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 266 VSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 56779999999999999999999999986
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=326.64 Aligned_cols=245 Identities=17% Similarity=0.187 Sum_probs=201.9
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC--CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS--WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
..|.+++.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++......++|||
T Consensus 22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 101 (287)
T 2wei_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (287)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence 35678889999999999999986 58999999986532 2346789999999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC---CCeeEcccCCccccCCC-
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED---GDPRLSSFGLMKNSRDG- 214 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfgla~~~~~~- 214 (497)
|+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++|+||||+||+++.+ +.+||+|||++......
T Consensus 102 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~ 178 (287)
T 2wei_A 102 LYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178 (287)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS
T ss_pred ccCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChhhEEEecCCCcccEEEeccCcceeecCCC
Confidence 9999999998865 457999999999999999999999999 9999999999999754 47999999998865443
Q ss_pred --CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCC--CHHHHHHH
Q 010932 215 --KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY--ANEDATQL 290 (497)
Q Consensus 215 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l 290 (497)
....+|+.|+|||++.+ .++.++||||||+++|+|++|..||........... +......... ....+..+
T Consensus 179 ~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 253 (287)
T 2wei_A 179 KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR----VETGKYAFDLPQWRTISDDA 253 (287)
T ss_dssp SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHCCCCCCSGGGTTSCHHH
T ss_pred ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHH----HHcCCCCCCchhhhhcCHHH
Confidence 23457899999999875 589999999999999999999998865433222111 1111111111 12356789
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHH
Q 010932 291 VELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 291 ~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+|+.+||+.||++|||+.+++++
T Consensus 254 ~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 254 KDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHcccChhhCcCHHHHhcC
Confidence 999999999999999999999985
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=338.26 Aligned_cols=196 Identities=18% Similarity=0.143 Sum_probs=169.4
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCC-CC-----cceeeeeeeeeCCceE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR-HK-----RLVNLIGCCAEGDERL 134 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~~~~~~~~~~~~~ 134 (497)
+.|.+++.||+|+||+||+|.+. +|+.||||+++... .....+.+|+.+++.++ |+ +|+.+++++...+..+
T Consensus 54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 132 (382)
T 2vx3_A 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLC 132 (382)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEE
T ss_pred eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceE
Confidence 56788889999999999999976 48899999997432 12456778888888874 44 4999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc--CCCcccccCCCcceEeC--CCCCeeEcccCCccc
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNS--QNRKLYHDLNAYRVLFD--EDGDPRLSSFGLMKN 210 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~--~~~iiH~Dlkp~Nill~--~~~~~kl~Dfgla~~ 210 (497)
+||||+. ++|.+++.......+++..+..++.||+.||.|||+ .+ |+||||||+|||++ .++.+||+|||+++.
T Consensus 133 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~-ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~ 210 (382)
T 2vx3_A 133 LVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSSCQ 210 (382)
T ss_dssp EEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTC-EECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCC-EEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence 9999996 599999977555679999999999999999999995 56 99999999999995 578899999999986
Q ss_pred cCCC-CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCch
Q 010932 211 SRDG-KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSH 260 (497)
Q Consensus 211 ~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~ 260 (497)
.... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 211 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 211 LGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 5443 4567899999999999999999999999999999999999988754
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-42 Score=342.56 Aligned_cols=250 Identities=14% Similarity=0.201 Sum_probs=200.8
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCC-----------CCcceeeeeeeee
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR-----------HKRLVNLIGCCAE 129 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~~~~~~~~ 129 (497)
..|.+++.||+|+||+||+|.+. +|+.||||++.... ...+.+.+|+.++++++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 46788899999999999999975 58999999997432 23467889999999886 8999999999976
Q ss_pred CC----ceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCcccccCCCcceEeC------CCC
Q 010932 130 GD----ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQ-NRKLYHDLNAYRVLFD------EDG 198 (497)
Q Consensus 130 ~~----~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~-~~iiH~Dlkp~Nill~------~~~ 198 (497)
.. ..++||||+ +++|.+++.......+++..+..++.||+.||.|||++ + ++||||||+|||++ ..+
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~-ivH~Dikp~NIll~~~~~~~~~~ 175 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLI 175 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEE
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC-EEecCCChHHeEEeccCCCcCcc
Confidence 54 789999999 89999999876567799999999999999999999998 8 99999999999994 445
Q ss_pred CeeEcccCCccccCCC-CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhc-----ccccc
Q 010932 199 DPRLSSFGLMKNSRDG-KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRG-----KNLLL 272 (497)
Q Consensus 199 ~~kl~Dfgla~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~-----~~~~~ 272 (497)
.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||.......... ..+..
T Consensus 176 ~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (373)
T 1q8y_A 176 QIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255 (373)
T ss_dssp EEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHH
T ss_pred eEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHH
Confidence 7999999999865443 45678999999999999999999999999999999999999886432110000 00000
Q ss_pred ------------------ccc---------c----------ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 273 ------------------LMD---------S----------SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 273 ------------------~~~---------~----------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+. . .....++...+..+.+||.+||+.||++|||+.+++++
T Consensus 256 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 256 LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred hcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence 000 0 00123456788999999999999999999999999986
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-42 Score=331.94 Aligned_cols=239 Identities=21% Similarity=0.288 Sum_probs=194.7
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC------ChhHHHHHHHHhccC----CCCcceeeeeeeeeC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP------DPHQFVTEAAGLGNV----RHKRLVNLIGCCAEG 130 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l----~h~niv~~~~~~~~~ 130 (497)
+.|.+++.||+|+||.||+|.+. +|+.||||++...... ....+.+|+.++.++ +||||+++++++...
T Consensus 31 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~ 110 (312)
T 2iwi_A 31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQ 110 (312)
T ss_dssp --CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC---
T ss_pred hceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecC
Confidence 34677888899999999999975 5899999999765332 234567899999888 899999999999999
Q ss_pred CceEEEEEc-CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC-CCCCeeEcccCCc
Q 010932 131 DERLLVAQY-MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD-EDGDPRLSSFGLM 208 (497)
Q Consensus 131 ~~~~lv~e~-~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfgla 208 (497)
+..++|+|+ +.+++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++ .++.+||+|||++
T Consensus 111 ~~~~~v~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~dfg~~ 187 (312)
T 2iwi_A 111 EGFMLVLERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSRG-VVHRDIKDENILIDLRRGCAKLIDFGSG 187 (312)
T ss_dssp --CEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT-EECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred CeEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChhhEEEeCCCCeEEEEEcchh
Confidence 999999999 789999999976 457999999999999999999999999 99999999999999 8899999999999
Q ss_pred cccCCC--CccccCCCCCCccccccCCC-CcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHH
Q 010932 209 KNSRDG--KSYSTNLAYTPPEFLRTGRV-IPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANE 285 (497)
Q Consensus 209 ~~~~~~--~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (497)
+..... ....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||....... .. ...++..
T Consensus 188 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~----------~~~~~~~ 255 (312)
T 2iwi_A 188 ALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEIL--EA----------ELHFPAH 255 (312)
T ss_dssp EECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH--HT----------CCCCCTT
T ss_pred hhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHh--hh----------ccCCccc
Confidence 865443 34568999999999987666 458999999999999999998886532111 10 1123445
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 010932 286 DATQLVELASKCLQYEAKDRPDVKFLLSAV 315 (497)
Q Consensus 286 ~~~~l~~li~~cl~~dp~~Rps~~~ll~~l 315 (497)
.+..+.+|+.+||+.||++|||+.+++++-
T Consensus 256 ~~~~~~~li~~~l~~~p~~Rps~~e~l~~~ 285 (312)
T 2iwi_A 256 VSPDCCALIRRCLAPKPSSRPSLEEILLDP 285 (312)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHHST
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 667899999999999999999999999863
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-41 Score=332.24 Aligned_cols=250 Identities=16% Similarity=0.154 Sum_probs=200.2
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-C-cEEEEEEccCCCCCChhHHHHHHHHhccCCCCc------ceeeeeeeeeCCce
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-N-RLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKR------LVNLIGCCAEGDER 133 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~~~ 133 (497)
..|.+++.||+|+||+||+|.... + +.||||+++... ...+.+.+|+.+++.++|++ ++.+++++......
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 467888999999999999999753 4 789999997432 23467889999999997666 89999999999999
Q ss_pred EEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEe-------------------
Q 010932 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF------------------- 194 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill------------------- 194 (497)
++||||+ +++|.+++.......+++..+..++.||+.||.|||+++ ++||||||+|||+
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ-LTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecccccccccccccccccc
Confidence 9999999 667777776655567999999999999999999999999 9999999999999
Q ss_pred CCCCCeeEcccCCccccCCC-CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc-----
Q 010932 195 DEDGDPRLSSFGLMKNSRDG-KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK----- 268 (497)
Q Consensus 195 ~~~~~~kl~Dfgla~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~----- 268 (497)
+.++.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...........
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 255 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKIL 255 (355)
T ss_dssp ESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred cCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence 56789999999999865443 456789999999999999999999999999999999999998865432211000
Q ss_pred -cc-c---------cc-ccc---------------------ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 269 -NL-L---------LL-MDS---------------------SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 269 -~~-~---------~~-~~~---------------------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.. . .. ... ..........+..+.+|+.+||+.||++|||+.+++++
T Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 334 (355)
T 2eu9_A 256 GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLH 334 (355)
T ss_dssp CCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred CCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00 0 00 000 00001123456789999999999999999999999975
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-41 Score=320.82 Aligned_cols=231 Identities=15% Similarity=0.111 Sum_probs=185.4
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCC---hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
..|.+++.||+|+||.||+|.+.. |+.||||++....... .+.+.+|+.++..++||||+++++++...+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 357788899999999999999865 8999999998664433 367999999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCcc
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSY 217 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~ 217 (497)
||++|++|.+++.. ......+..|+.||+.||.|||++| ++||||||+|||++.+|.+||+++|
T Consensus 111 e~~~g~~L~~~l~~----~~~~~~~~~i~~ql~~aL~~lH~~g-ivH~Dikp~NIll~~~g~~kl~~~~----------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADT----SPSPVGAIRAMQSLAAAADAAHRAG-VALSIDHPSRVRVSIDGDVVLAYPA----------- 174 (286)
T ss_dssp ECCCEEEHHHHHTT----CCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred EecCCCCHHHHHhc----CCChHHHHHHHHHHHHHHHHHHHCC-CccCCCCcccEEEcCCCCEEEEecc-----------
Confidence 99999999999943 2456678999999999999999999 9999999999999999999998543
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccC--CCCCHHHHHHHHHHHH
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLE--GQYANEDATQLVELAS 295 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~ 295 (497)
|++ .++.++|||||||++|+|+||+.||........... .......... .......+..+.+|+.
T Consensus 175 -----~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~ 241 (286)
T 3uqc_A 175 -----TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP-AERDTAGQPIEPADIDRDIPFQISAVAA 241 (286)
T ss_dssp -----CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE-CCBCTTSCBCCHHHHCTTSCHHHHHHHH
T ss_pred -----ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH-HHHHhccCCCChhhcccCCCHHHHHHHH
Confidence 443 368899999999999999999998865421110000 0000011000 0112346678999999
Q ss_pred HhcccCCCCCCCHHHHHHHhhhhhccc
Q 010932 296 KCLQYEAKDRPDVKFLLSAVAPLQKQT 322 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~l~~~~~~~ 322 (497)
+||+.||++| |+.++++.|+.+....
T Consensus 242 ~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 242 RSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp HHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred HHcccCCccC-CHHHHHHHHHHHhccC
Confidence 9999999999 9999999999987543
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-41 Score=340.75 Aligned_cols=242 Identities=18% Similarity=0.136 Sum_probs=185.3
Q ss_pred ccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEEEcCCCCC
Q 010932 66 IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVAQYMPNDT 144 (497)
Q Consensus 66 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 144 (497)
+.+.||+|+||+||.+...+|+.||||++... ..+.+.+|+.+|.++ +|||||++++++.+....++||||+. |+
T Consensus 19 ~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gs 94 (434)
T 2rio_A 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LN 94 (434)
T ss_dssp EEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EE
T ss_pred ccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CC
Confidence 34668999999998776667999999998653 245688999999876 89999999999999999999999995 69
Q ss_pred hhhhhhcCCCCC-----CCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC-------------CCeeEcccC
Q 010932 145 LSKHLFHWDKQP-----LPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED-------------GDPRLSSFG 206 (497)
Q Consensus 145 L~~~l~~~~~~~-----l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~-------------~~~kl~Dfg 206 (497)
|.+++....... .++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||
T Consensus 95 L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG 173 (434)
T 2rio_A 95 LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK-IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173 (434)
T ss_dssp HHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCT
T ss_pred HHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCcccccccccCCCceEEEEcccc
Confidence 999997532211 123345789999999999999999 9999999999999754 479999999
Q ss_pred CccccCCC--------CccccCCCCCCcccccc-------CCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhcccc
Q 010932 207 LMKNSRDG--------KSYSTNLAYTPPEFLRT-------GRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNL 270 (497)
Q Consensus 207 la~~~~~~--------~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~ 270 (497)
+++..... ....||+.|+|||++.+ ..++.++|||||||++|||+| |+.||.......... .
T Consensus 174 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i--~ 251 (434)
T 2rio_A 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI--I 251 (434)
T ss_dssp TCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHH--H
T ss_pred cceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHH--h
Confidence 99865432 23468999999999975 568999999999999999999 887775432211100 0
Q ss_pred ccccc-cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 271 LLLMD-SSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 271 ~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..... .......+...+..+.+|+.+||+.||.+|||+.+++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 252 RGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp HTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 00111 111112245678899999999999999999999999985
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-41 Score=326.01 Aligned_cols=249 Identities=17% Similarity=0.223 Sum_probs=181.1
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
++.+.+++.||+|+||.||+|.+. +|+.||||++....... .+.+..+..+++.++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 456788899999999999999986 59999999997653222 223445556788889999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCcccccCCCcceEeCCCCCeeEcccCCccccCCC--
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQ-NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 214 (497)
||+ ++.+..+... ....+++..+..++.||+.||.|||++ + ++|+||||+|||++.++.+||+|||++......
T Consensus 104 e~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (318)
T 2dyl_A 104 ELM-GTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKHG-VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180 (318)
T ss_dssp CCC-SEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecc-CCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhhCC-EEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc
Confidence 999 5555554432 356799999999999999999999995 8 999999999999999999999999998754432
Q ss_pred -CccccCCCCCCccccc-----cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHH
Q 010932 215 -KSYSTNLAYTPPEFLR-----TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (497)
....+|+.|+|||++. ...++.++|||||||++|+|++|+.||................... ........+.
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 258 (318)
T 2dyl_A 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPP--LLPGHMGFSG 258 (318)
T ss_dssp ------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCC--CCCSSSCCCH
T ss_pred ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCC--CCCccCCCCH
Confidence 2356899999999994 4568899999999999999999998886422111100000000000 0011123567
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+.+|+.+||+.||.+|||+.+++++
T Consensus 259 ~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 259 DFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp HHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred HHHHHHHHHccCChhHCcCHHHHhhC
Confidence 79999999999999999999999985
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-41 Score=352.14 Aligned_cols=251 Identities=17% Similarity=0.156 Sum_probs=197.3
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeee------CCc
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAE------GDE 132 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~ 132 (497)
+..|.+++.||+|+||+||+|.+. +|+.||||++..... ...+.+.+|+.+|+.++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 456788999999999999999975 589999999876422 224578999999999999999999998755 667
Q ss_pred eEEEEEcCCCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCC---eeEcccCCc
Q 010932 133 RLLVAQYMPNDTLSKHLFHWD-KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGD---PRLSSFGLM 208 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfgla 208 (497)
.++||||++|++|.+++.... ...+++..+..++.||+.||.|||+.| ++||||||+|||++.++. +||+|||++
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g-IVHrDLKP~NILl~~~g~~~~vKL~DFG~a 171 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR-IIHRDLKPENIVLQPGPQRLIHKIIDLGYA 171 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT-BCCCCCCSTTEEEECCSSSCEEEECSCCCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEeecCCCceeEEEcccccc
Confidence 899999999999999997632 236999999999999999999999999 999999999999997765 899999999
Q ss_pred cccCCC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhc--------------cccc
Q 010932 209 KNSRDG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRG--------------KNLL 271 (497)
Q Consensus 209 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~--------------~~~~ 271 (497)
...... ....||+.|+|||++.+..++.++|||||||++|+|++|..||.......... ....
T Consensus 172 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 251 (676)
T 3qa8_A 172 KELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLT 251 (676)
T ss_dssp CBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCS
T ss_pred cccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhc
Confidence 865443 34578999999999999999999999999999999999999886432111100 0000
Q ss_pred ccc--cc--ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 010932 272 LLM--DS--SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLL 312 (497)
Q Consensus 272 ~~~--~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll 312 (497)
... .. ......+...+..+.+|+.+||+.||++|||+.+++
T Consensus 252 g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 252 GAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp SSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred cccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 000 00 011224456789999999999999999999997744
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=336.18 Aligned_cols=243 Identities=19% Similarity=0.135 Sum_probs=185.9
Q ss_pred cccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
.+.+.+.||+|+||+|+.....+|+.||||++.... ...+.+|+.+|+.+ +|||||++++++.+....++||||+.
T Consensus 25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~ 101 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA 101 (432)
T ss_dssp EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence 355667789999999765555679999999996533 34577899999999 79999999999999999999999996
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC-----CCCeeEcccCCccccCCC--
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE-----DGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~-----~~~~kl~Dfgla~~~~~~-- 214 (497)
|+|.+++... ...+++..+..++.||+.||.|||+++ |+||||||+|||++. ...+||+|||+++.....
T Consensus 102 -g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~ 178 (432)
T 3p23_A 102 -ATLQEYVEQK-DFAHLGLEPITLLQQTTSGLAHLHSLN-IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178 (432)
T ss_dssp -EEHHHHHHSS-SCCCCSSCHHHHHHHHHHHHHHHHHTT-CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred -CCHHHHHHhc-CCCccchhHHHHHHHHHHHHHHHHHCc-CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence 6999998753 334555567899999999999999999 999999999999953 235789999999865432
Q ss_pred -----CccccCCCCCCccccc---cCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHH
Q 010932 215 -----KSYSTNLAYTPPEFLR---TGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANE 285 (497)
Q Consensus 215 -----~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (497)
....||+.|+|||++. ...++.++|||||||++|||+| |..||........... ..... ......+..
T Consensus 179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~--~~~~~-~~~~~~~~~ 255 (432)
T 3p23_A 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL--LGACS-LDCLHPEKH 255 (432)
T ss_dssp -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHH--TTCCC-CTTSCTTCH
T ss_pred ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHH--hccCC-ccccCcccc
Confidence 2356899999999997 4567889999999999999999 7766643322111110 00000 001112344
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 286 DATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 286 ~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+..+.+||.+||+.||.+|||+.+++++
T Consensus 256 ~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 256 EDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp HHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 56778999999999999999999999976
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=315.06 Aligned_cols=226 Identities=15% Similarity=0.119 Sum_probs=182.0
Q ss_pred ccccc-ccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHh-ccCCCCcceeeeeeeee----CCceEE
Q 010932 63 SELIV-SESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGL-GNVRHKRLVNLIGCCAE----GDERLL 135 (497)
Q Consensus 63 ~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~----~~~~~l 135 (497)
.+.++ +.||+|+||.||++... +|+.||||++.. ...+.+|+.++ +.++||||+++++++.. ....++
T Consensus 18 ~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 92 (299)
T 3m2w_A 18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 92 (299)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred chhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEE
Confidence 45566 56899999999999975 589999999963 35688899988 66689999999999977 667899
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC---CCCeeEcccCCccccC
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE---DGDPRLSSFGLMKNSR 212 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~ 212 (497)
||||+++++|.+++.......+++..+..++.||+.||.|||+++ ++||||||+|||++. ++.+||+|||++....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 171 (299)
T 3m2w_A 93 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171 (299)
T ss_dssp EECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECT
T ss_pred EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEecCCCCCcEEEeccccccccc
Confidence 999999999999998755568999999999999999999999999 999999999999997 7899999999986432
Q ss_pred CCCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCC----HHHHH
Q 010932 213 DGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA----NEDAT 288 (497)
Q Consensus 213 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 288 (497)
+..++.++|||||||++|+|++|+.||................... ....+ ...+.
T Consensus 172 ------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 231 (299)
T 3m2w_A 172 ------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG--QYEFPNPEWSEVSE 231 (299)
T ss_dssp ------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTT--CCSSCHHHHTTSCH
T ss_pred ------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhc--cccCCchhcccCCH
Confidence 3567889999999999999999999886543222211111111111 11122 23577
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+.+|+.+||+.||++|||+.+++++
T Consensus 232 ~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 232 EVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHcccChhhCCCHHHHhcC
Confidence 89999999999999999999999985
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-40 Score=333.88 Aligned_cols=238 Identities=13% Similarity=0.076 Sum_probs=180.4
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC---ChhHHHHHHHHhccCCC-Ccceeee--------------
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP---DPHQFVTEAAGLGNVRH-KRLVNLI-------------- 124 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h-~niv~~~-------------- 124 (497)
+.+.+.||+|+||+||+|.+. +|+.||||++...... ..+.+.+|+.+++.++| +|+..+.
T Consensus 80 ~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 159 (413)
T 3dzo_A 80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD 159 (413)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEEC
T ss_pred EEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhccc
Confidence 445567899999999999975 5999999998743322 35789999999999977 3221111
Q ss_pred -------eeeee-----CCceEEEEEcCCCCChhhhhh-----cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccC
Q 010932 125 -------GCCAE-----GDERLLVAQYMPNDTLSKHLF-----HWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDL 187 (497)
Q Consensus 125 -------~~~~~-----~~~~~lv~e~~~~~~L~~~l~-----~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dl 187 (497)
.++.. ....+++|+++ +++|.+++. ......+++..+..++.||+.||.|||+++ |+||||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-iiHrDi 237 (413)
T 3dzo_A 160 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHTYL 237 (413)
T ss_dssp CC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EECSCC
T ss_pred CCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCc
Confidence 11111 12456677765 789998884 222456888899999999999999999999 999999
Q ss_pred CCcceEeCCCCCeeEcccCCccccCCC-CccccCCCCCCcccc----------ccCCCCcccceeehhhhHHHHhhCCCC
Q 010932 188 NAYRVLFDEDGDPRLSSFGLMKNSRDG-KSYSTNLAYTPPEFL----------RTGRVIPESVIYSYGTVLLDLLSGKHI 256 (497)
Q Consensus 188 kp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~gt~~y~aPE~~----------~~~~~~~~~Dv~slG~~l~elltg~~~ 256 (497)
||+|||++.++.+||+|||+++..... ....| +.|+|||++ .+..++.++|||||||++|||+||+.|
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P 316 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP 316 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred ccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence 999999999999999999998865433 34566 999999999 555688899999999999999999998
Q ss_pred CCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 257 PPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
|........ ....+.. ....++.+.+|+.+||+.||++|||+.+++++
T Consensus 317 f~~~~~~~~----~~~~~~~------~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 317 NTDDAALGG----SEWIFRS------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp CCTTGGGSC----SGGGGSS------CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCcchhhh----HHHHHhh------cccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 865432111 1111110 11345779999999999999999999888765
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-40 Score=323.21 Aligned_cols=241 Identities=12% Similarity=0.051 Sum_probs=185.2
Q ss_pred CcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCC--------CChhHHHHHHHHhccCC---------CCcceeee
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSW--------PDPHQFVTEAAGLGNVR---------HKRLVNLI 124 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~---------h~niv~~~ 124 (497)
..+.+++.||+|+||+||+|++ +|+.||||++..... ...+.+.+|+.+|+.++ |||||++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 4567888999999999999998 689999999976532 12367899999988886 55555554
Q ss_pred e-----------------eeee-------------CCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 010932 125 G-----------------CCAE-------------GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALD 174 (497)
Q Consensus 125 ~-----------------~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~ 174 (497)
+ ++.+ ....++||||+++|++.+.+. ...+++..++.++.||+.||.
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~---~~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR---TKLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT---TTCCCHHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH---hcCCCHHHHHHHHHHHHHHHH
Confidence 4 4443 678999999999997766663 367899999999999999999
Q ss_pred HHH-cCCCcccccCCCcceEeCCCC--------------------CeeEcccCCccccCCCCccccCCCCCCccccccCC
Q 010932 175 HCN-SQNRKLYHDLNAYRVLFDEDG--------------------DPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGR 233 (497)
Q Consensus 175 ~lh-~~~~iiH~Dlkp~Nill~~~~--------------------~~kl~Dfgla~~~~~~~~~~gt~~y~aPE~~~~~~ 233 (497)
||| +++ |+||||||+|||++.++ .+||+|||+++..... ...||+.|+|||++.+..
T Consensus 176 ~lH~~~~-ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g~~ 253 (336)
T 2vuw_A 176 VAEASLR-FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFTGDG 253 (336)
T ss_dssp HHHHHHC-CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGCCCS
T ss_pred HHHHhCC-EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhcCCC
Confidence 999 898 99999999999999887 8999999999865543 457899999999998665
Q ss_pred CCcccceeehhhh-HHHHhhCCCCCCchhhHHHhccccc-c-ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 010932 234 VIPESVIYSYGTV-LLDLLSGKHIPPSHALDVIRGKNLL-L-LMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310 (497)
Q Consensus 234 ~~~~~Dv~slG~~-l~elltg~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ 310 (497)
+.++||||||++ .+++++|..||....+.......+. . ..........+...++++.+||.+||+.| |+.+
T Consensus 254 -~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e 327 (336)
T 2vuw_A 254 -DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATD 327 (336)
T ss_dssp -SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHH
T ss_pred -ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHH
Confidence 889999998777 7888999987744221110000111 0 01111111223567899999999999976 9999
Q ss_pred HH-HH
Q 010932 311 LL-SA 314 (497)
Q Consensus 311 ll-~~ 314 (497)
++ ++
T Consensus 328 ~l~~H 332 (336)
T 2vuw_A 328 LLCQH 332 (336)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 98 64
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-32 Score=283.01 Aligned_cols=180 Identities=14% Similarity=0.067 Sum_probs=130.2
Q ss_pred cCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC----------hhHHHHHHHHhccC-CCCcceeeeeeeeeCCceEEE
Q 010932 69 ESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD----------PHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~----------~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 136 (497)
..+.|++|.+..++.. -|+.||||++....... .++|.+|+++|+++ .|+||+++++++.++...|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 3466777766665533 38999999997543211 24699999999999 699999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 214 (497)
|||++|++|.++|.. .+.++.. .|+.||+.||.|+|++| ||||||||+|||++.+|++||+|||+|+.....
T Consensus 321 MEyv~G~~L~d~i~~--~~~l~~~---~I~~QIl~AL~ylH~~G-IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~ 394 (569)
T 4azs_A 321 MEKLPGRLLSDMLAA--GEEIDRE---KILGSLLRSLAALEKQG-FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS 394 (569)
T ss_dssp EECCCSEEHHHHHHT--TCCCCHH---HHHHHHHHHHHHHHHTT-CEESCCCGGGEEECTTSCEEECCCTTEESCC---C
T ss_pred EecCCCCcHHHHHHh--CCCCCHH---HHHHHHHHHHHHHHHCC-ceeccCchHhEEECCCCCEEEeecccCeeCCCCCc
Confidence 999999999999975 5667654 58999999999999999 999999999999999999999999999865443
Q ss_pred --CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCC
Q 010932 215 --KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKH 255 (497)
Q Consensus 215 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~ 255 (497)
.+.+||+.|||||++.+ .+..++|+||+|++++++.++..
T Consensus 395 ~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~ 436 (569)
T 4azs_A 395 WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWS 436 (569)
T ss_dssp CSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccc
Confidence 24578999999999974 57778999999999999887753
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.7e-28 Score=251.17 Aligned_cols=175 Identities=17% Similarity=0.134 Sum_probs=144.3
Q ss_pred ccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCC--------hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 68 SESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD--------PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
+.||+|+||+||++.. .+..+++|+........ .+++.+|+++|++++||||+++..++...+..+|||||
T Consensus 342 ~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~ 420 (540)
T 3en9_A 342 HLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSY 420 (540)
T ss_dssp ------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEEC
T ss_pred CEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEEC
Confidence 3579999999999954 57889999875533222 23589999999999999999777777777888999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-----
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----- 214 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 214 (497)
++|++|.+++.. +..++.||+.||.|||+++ |+||||||+|||++. ++||+|||+++.....
T Consensus 421 ~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g-IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~ 487 (540)
T 3en9_A 421 INGKLAKDVIED----------NLDIAYKIGEIVGKLHKND-VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV 487 (540)
T ss_dssp CCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT-EECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHH
T ss_pred CCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc-CccCCCCHHHEEECC--eEEEEECccCEECCCcccccc
Confidence 999999999853 5689999999999999999 999999999999998 9999999999976553
Q ss_pred ------CccccCCCCCCcccccc--CCCCcccceeehhhhHHHHhhCCCC
Q 010932 215 ------KSYSTNLAYTPPEFLRT--GRVIPESVIYSYGTVLLDLLSGKHI 256 (497)
Q Consensus 215 ------~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~~ 256 (497)
....||+.|||||++.. ..|+..+|+||..+-..+-+.++.+
T Consensus 488 ~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~r 537 (540)
T 3en9_A 488 DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRAR 537 (540)
T ss_dssp HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSC
T ss_pred chhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccc
Confidence 24578999999999986 5688899999999988888777654
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-25 Score=211.81 Aligned_cols=153 Identities=12% Similarity=0.047 Sum_probs=122.1
Q ss_pred HHHhcCCCcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCC------------------ChhHHHHHHHHhccCC
Q 010932 55 RAATNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWP------------------DPHQFVTEAAGLGNVR 116 (497)
Q Consensus 55 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~------------------~~~~~~~e~~~l~~l~ 116 (497)
....+.-..+.+.+.||+|+||.||+|.+.+|+.||||+++..... ....+.+|+.+|++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 3344444455666889999999999999977999999999643211 1346899999999998
Q ss_pred CCcceeeeeeeeeCCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC
Q 010932 117 HKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE 196 (497)
Q Consensus 117 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~ 196 (497)
| +++.+++.. +..++||||++|++|.+ +.. .....++.||+.||.|||+.| ++||||||+|||++
T Consensus 163 --~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~g-iiHrDlkp~NILl~- 227 (282)
T 1zar_A 163 --G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLVS- 227 (282)
T ss_dssp --T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEE-
T ss_pred --C-CCcCeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCC-CEeCCCCHHHEEEE-
Confidence 5 677776544 55699999999999988 521 234579999999999999999 99999999999999
Q ss_pred CCCeeEcccCCccccCCCCccccCCCCCCcccccc
Q 010932 197 DGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRT 231 (497)
Q Consensus 197 ~~~~kl~Dfgla~~~~~~~~~~gt~~y~aPE~~~~ 231 (497)
++.+||+|||+++. +..++|||++..
T Consensus 228 ~~~vkl~DFG~a~~---------~~~~~a~e~l~r 253 (282)
T 1zar_A 228 EEGIWIIDFPQSVE---------VGEEGWREILER 253 (282)
T ss_dssp TTEEEECCCTTCEE---------TTSTTHHHHHHH
T ss_pred CCcEEEEECCCCeE---------CCCCCHHHHHHH
Confidence 99999999999873 456789998853
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-21 Score=162.20 Aligned_cols=108 Identities=16% Similarity=0.200 Sum_probs=105.0
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQAL 466 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 466 (497)
+.+++++++|+.+++.|+|++|+..|++||+ ++|+++.+|+++|.+|..+|++++|+.+|++||+++|+++.+|+++|.
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~-~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~ 89 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVK-RDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAA 89 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHH
Confidence 5688999999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 467 ALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 467 ~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
+|..+|++++|+++|++|++++|++..++
T Consensus 90 ~~~~~~~~~~A~~~~~~al~l~P~~~~a~ 118 (126)
T 4gco_A 90 CLVAMREWSKAQRAYEDALQVDPSNEEAR 118 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHCcCCHHHH
Confidence 99999999999999999999999988765
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.7e-21 Score=166.14 Aligned_cols=132 Identities=13% Similarity=0.104 Sum_probs=121.0
Q ss_pred HhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhc
Q 010932 364 KTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQ 439 (497)
Q Consensus 364 ~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~ 439 (497)
.+|..+..+++.+.|++.+.+++ +++..++.+|.+|+..|+|++|+..|+++|+ ++|+++.+|+++|.+|..+|+
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~-~~p~~~~a~~~lg~~~~~~~~ 80 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYIN-VQERDPKAHRFLGLLYELEEN 80 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTC
T ss_pred HhHHHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHcCc
Confidence 36788889999999999999988 7788899999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHH-HHHhhcCccccccCCC
Q 010932 440 AELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDM-LNDGASFEAKKQNSWR 496 (497)
Q Consensus 440 ~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~-~~~a~~l~~~~~~~~~ 496 (497)
+++|+..|++|++++|+++.+|+++|.+|..+|++++|.+. +++|++++|+++.+|+
T Consensus 81 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~ 138 (150)
T 4ga2_A 81 TDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYK 138 (150)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHH
Confidence 99999999999999999999999999999999999988776 5999999999987764
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=5.2e-21 Score=179.76 Aligned_cols=150 Identities=10% Similarity=0.030 Sum_probs=113.7
Q ss_pred CHHHHHHHhcCCCcccccccCCCCCCcEEEEEEE-cCCcE--EEEEEccCCCCCC------------------------h
Q 010932 50 VLADLRAATNGFSSELIVSESGDKAPNVVYRGRL-KNNRL--VAIKRFSRQSWPD------------------------P 102 (497)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~--vavK~~~~~~~~~------------------------~ 102 (497)
+...+....+.-..+.+.+.||+|+||.||+|.+ .+|+. ||||+++...... .
T Consensus 35 ~~~~l~~~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (258)
T 1zth_A 35 TLKTLYKLSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVF 114 (258)
T ss_dssp HHHHHHHHHHTTSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHH
T ss_pred HHHHHHHHHhCCCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHH
Confidence 3444445555555567888999999999999998 67988 9999976432110 1
Q ss_pred hHHHHHHHHhccCCCCcc--eeeeeeeeeCCceEEEEEcCCC-C----ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHH
Q 010932 103 HQFVTEAAGLGNVRHKRL--VNLIGCCAEGDERLLVAQYMPN-D----TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDH 175 (497)
Q Consensus 103 ~~~~~e~~~l~~l~h~ni--v~~~~~~~~~~~~~lv~e~~~~-~----~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~ 175 (497)
..+.+|+.+|..++|++| +.+++. ...+|||||+.+ | +|.++... .++..+..++.||+.||.|
T Consensus 115 ~~~~~E~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~ 185 (258)
T 1zth_A 115 IWTEKEFRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKR 185 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHH
Confidence 258899999999988764 333332 356899999942 3 66665422 2345678899999999999
Q ss_pred HH-cCCCcccccCCCcceEeCCCCCeeEcccCCcccc
Q 010932 176 CN-SQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS 211 (497)
Q Consensus 176 lh-~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 211 (497)
|| +.| ++||||||+|||++. .++|+|||++...
T Consensus 186 lH~~~g-ivHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 186 LYQEAE-LVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp HHHTSC-EECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred HHHHCC-EEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 99 888 999999999999998 9999999999754
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.83 E-value=2.4e-20 Score=158.23 Aligned_cols=109 Identities=15% Similarity=0.108 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCC-------cHH-----HHHHHHHHHHhhhcHHHHHHHHHHHHHh
Q 010932 386 VQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVP-------SGT-----VFVRRALSYLMIEQAELALRDAMQAQVC 453 (497)
Q Consensus 386 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~-------~~~-----~~~~~g~~~~~~~~~~~A~~~~~~al~l 453 (497)
+..+..+.++|+.++..|+|++|+.+|++||+ ++|+ +.. +|+|+|.++.++|+|++|+.+|++||++
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~-l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAME-ISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHh-hCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 45788899999999999999999999999999 9999 444 9999999999999999999999999999
Q ss_pred -------CCCChHHH----HHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 454 -------LPEWPTAF----YMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 454 -------~p~~~~a~----~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
+|+++++| |++|.+|..+|++++|+.+|++|++++|++.-.+
T Consensus 87 ~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~ 139 (159)
T 2hr2_A 87 FNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGET 139 (159)
T ss_dssp HHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCC
T ss_pred hhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 99999999 9999999999999999999999999999876543
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.81 E-value=7.1e-20 Score=156.93 Aligned_cols=105 Identities=11% Similarity=0.001 Sum_probs=102.4
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQAL 466 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 466 (497)
+++.+++.+|..+++.|+|++|+..|++++. ++|+++.+|+++|.+|..+|+|++|+..|++|++++|+++.+|+++|.
T Consensus 34 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~-~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~ 112 (151)
T 3gyz_A 34 DMMDDIYSYAYDFYNKGRIEEAEVFFRFLCI-YDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQ 112 (151)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHH
Confidence 7888999999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhcCccccc
Q 010932 467 ALNKLGMETDAQDMLNDGASFEAKKQ 492 (497)
Q Consensus 467 ~~~~~~~~~~A~~~~~~a~~l~~~~~ 492 (497)
+|..+|++++|+.+|++|+++.|+..
T Consensus 113 ~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 113 CQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999998753
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-19 Score=193.67 Aligned_cols=139 Identities=11% Similarity=0.096 Sum_probs=133.9
Q ss_pred hHHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHH
Q 010932 356 TAVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRA 431 (497)
Q Consensus 356 ~~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g 431 (497)
+...+++.++|..+.++|++++|++.|++++ +++.+++++|.++.++|++++|+.+|++||+ ++|+++.+|+|+|
T Consensus 6 P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~-l~P~~~~a~~nLg 84 (723)
T 4gyw_A 6 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIR-ISPTFADAYSNMG 84 (723)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCCCHHHHHHHH
Confidence 4667899999999999999999999999999 5799999999999999999999999999999 9999999999999
Q ss_pred HHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 432 LSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 432 ~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
.+|..+|++++|++.|++|++++|+++.+|+++|.+|..+|++++|+++|++|++++|++..+|
T Consensus 85 ~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~ 148 (723)
T 4gyw_A 85 NTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAY 148 (723)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 9999999999999999999999999999999999999999999999999999999999987765
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.78 E-value=1.4e-19 Score=179.51 Aligned_cols=140 Identities=6% Similarity=0.036 Sum_probs=133.0
Q ss_pred hHHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhccc-HHHHHHHHHHHhhcCCCCcHHHHHHH
Q 010932 356 TAVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKD-FKNAIEYYSKLVSMMSVPSGTVFVRR 430 (497)
Q Consensus 356 ~~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~-~~~Ai~~~~~ai~~~~p~~~~~~~~~ 430 (497)
+...+.+..+|..+...+.+++|++.|++++ +++.+|+++|.++..+|+ +++|+.+|++||+ ++|+++.+|+++
T Consensus 94 p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~-l~P~~~~a~~~~ 172 (382)
T 2h6f_A 94 DKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIE-EQPKNYQVWHHR 172 (382)
T ss_dssp HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH-HCTTCHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHH-HCCCCHHHHHHH
Confidence 4677889999999999999999999999998 678999999999999996 9999999999999 999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCCC
Q 010932 431 ALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSWR 496 (497)
Q Consensus 431 g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~~ 496 (497)
|.++..+|++++|+..|++||+++|+++.+|+++|.++..+|++++|+.+|++|++++|++..+|+
T Consensus 173 g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~ 238 (382)
T 2h6f_A 173 RVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWN 238 (382)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999988885
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.78 E-value=8.1e-19 Score=145.98 Aligned_cols=103 Identities=18% Similarity=0.166 Sum_probs=98.2
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCC-------hH
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEW-------PT 459 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~-------~~ 459 (497)
+.+.++.++|+.+++.|+|++|+.+|++||+ ++|+++.+|+|+|.+|..+|+|++|+.+|++||+++|++ +.
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~-~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~ 84 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIE-LDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAK 84 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHH
Confidence 6678899999999999999999999999999 999999999999999999999999999999999999887 36
Q ss_pred HHHHHHHHHHHCCChHHHHHHHHHhhcCccc
Q 010932 460 AFYMQALALNKLGMETDAQDMLNDGASFEAK 490 (497)
Q Consensus 460 a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~ 490 (497)
+|+++|.++..+|++++|+++|++|++++|+
T Consensus 85 ~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 85 AMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC
Confidence 8999999999999999999999999988775
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.77 E-value=7.2e-19 Score=160.73 Aligned_cols=132 Identities=11% Similarity=0.023 Sum_probs=71.0
Q ss_pred HHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhc-----------ccHHHHHHHHHHHhhcCCCCcH
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRD-----------KDFKNAIEYYSKLVSMMSVPSG 424 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~-----------~~~~~Ai~~~~~ai~~~~p~~~ 424 (497)
..+...|..+...|++++|+..|++++ +++.+++.+|.++... |++++|+..|+++++ ++|+++
T Consensus 40 ~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~-~~P~~~ 118 (217)
T 2pl2_A 40 EALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAER-VNPRYA 118 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHH-HCTTCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHH-hCcccH
Confidence 444455555555555555555555544 3444555555555555 555555555555555 555555
Q ss_pred HHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccccc
Q 010932 425 TVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQN 493 (497)
Q Consensus 425 ~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~ 493 (497)
.+|+++|.++..+|++++|+..|++|++++ +++.+++++|.+|..+|++++|+..|++|++++|++..
T Consensus 119 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~ 186 (217)
T 2pl2_A 119 PLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLD 186 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChH
Confidence 555555555555555555555555555555 55555555555555555555555555555555555443
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2.1e-18 Score=147.50 Aligned_cols=113 Identities=12% Similarity=0.068 Sum_probs=106.3
Q ss_pred HHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCC
Q 010932 381 EWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPE 456 (497)
Q Consensus 381 ~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 456 (497)
.|++++ +++..++.+|..++..|+|++|+..|++++. ++|+++.+|+++|.++..+|+|++|+..|++|++++|+
T Consensus 9 ~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~-~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~ 87 (148)
T 2vgx_A 9 TIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCV-LDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIX 87 (148)
T ss_dssp SHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred hHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHH-cCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 345544 6888999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccC
Q 010932 457 WPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 457 ~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
++.+|+++|.+|..+|++++|+++|++|++++|+++..
T Consensus 88 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 125 (148)
T 2vgx_A 88 EPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEF 125 (148)
T ss_dssp CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGG
T ss_pred CchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcc
Confidence 99999999999999999999999999999999886654
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.9e-18 Score=142.03 Aligned_cols=106 Identities=16% Similarity=0.192 Sum_probs=101.6
Q ss_pred HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q 010932 388 DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALA 467 (497)
Q Consensus 388 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 467 (497)
.+..++.+|..++..|+|++|+..|+++++ ++|+++.+|+++|.++..+|++++|+.+|+++++++|+++.+|+++|.+
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~-~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIK-RAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATA 81 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHH-hCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 578899999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhhcCc------cccccC
Q 010932 468 LNKLGMETDAQDMLNDGASFE------AKKQNS 494 (497)
Q Consensus 468 ~~~~~~~~~A~~~~~~a~~l~------~~~~~~ 494 (497)
+..+|++++|+.+|++|++++ |++...
T Consensus 82 ~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~ 114 (126)
T 3upv_A 82 QIAVKEYASALETLDAARTKDAEVNNGSSAREI 114 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHH
T ss_pred HHHHhCHHHHHHHHHHHHHhCcccCCchhHHHH
Confidence 999999999999999999999 665543
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.76 E-value=2.4e-18 Score=152.40 Aligned_cols=135 Identities=16% Similarity=0.173 Sum_probs=124.8
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
.+.+..+|..+...|+++.|+..+.+++ .++..+...|..+...++++.|+..+.+++. ++|++..+++.+|.+|
T Consensus 39 ~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~-~~~~~~~~~~~lg~~~ 117 (184)
T 3vtx_A 39 VETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQRAIA-LNTVYADAYYKLGLVY 117 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCccchHHHHHHHHHH
Confidence 4567788888888899999999888877 5678888899999999999999999999999 9999999999999999
Q ss_pred HhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccC
Q 010932 435 LMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
..+|++++|+..|+++++++|+++.+|+++|.+|..+|++++|+++|++|++++|+++..
T Consensus 118 ~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~a~~ 177 (184)
T 3vtx_A 118 DSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEKKAKY 177 (184)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHHHHHH
T ss_pred HHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCccCHHH
Confidence 999999999999999999999999999999999999999999999999999999987654
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.76 E-value=5.5e-18 Score=153.74 Aligned_cols=132 Identities=12% Similarity=-0.017 Sum_probs=122.3
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHH----------------HHhHHhhcccHHHHHHHHHHHhhc
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKK----------------FGDIAFRDKDFKNAIEYYSKLVSM 418 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~----------------~g~~~~~~~~~~~Ai~~~~~ai~~ 418 (497)
.+.+...|..+...|++++|+..|++++ +++.+++. +|.++...|+|++|+..|+++++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~- 82 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQ- 82 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-
Confidence 4667888999999999999999999988 67888888 99999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHC---------------------------
Q 010932 419 MSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKL--------------------------- 471 (497)
Q Consensus 419 ~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~--------------------------- 471 (497)
++|+++.+|+++|.++..+|++++|+..|+++++++|+++.+|+++|.+|+.+
T Consensus 83 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 162 (208)
T 3urz_A 83 KAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYR 162 (208)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHH
T ss_pred HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHH
Confidence 99999999999999999999999999999999999999999999988876443
Q ss_pred --------CChHHHHHHHHHhhcCcccc
Q 010932 472 --------GMETDAQDMLNDGASFEAKK 491 (497)
Q Consensus 472 --------~~~~~A~~~~~~a~~l~~~~ 491 (497)
|+|++|+.+|++|++++|+.
T Consensus 163 ~g~~~~~~~~~~~A~~~~~~al~l~P~~ 190 (208)
T 3urz_A 163 DGLSKLFTTRYEKARNSLQKVILRFPST 190 (208)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTTTSCCH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhCCCH
Confidence 46899999999999999974
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.2e-18 Score=147.87 Aligned_cols=106 Identities=16% Similarity=0.124 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcC------------------CCCcHHHHHHHHHHHHhhhcHHHHHHHH
Q 010932 386 VQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMM------------------SVPSGTVFVRRALSYLMIEQAELALRDA 447 (497)
Q Consensus 386 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~------------------~p~~~~~~~~~g~~~~~~~~~~~A~~~~ 447 (497)
++.+..+..+|+.+++.|+|++|+..|++||+ + +|.++.+|+|+|.||.++|+|++|+.+|
T Consensus 8 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~ 86 (162)
T 3rkv_A 8 LKSVEALRQKGNELFVQKDYKEAIDAYRDALT-RLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETS 86 (162)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-HHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 46788999999999999999999999999999 7 7778899999999999999999999999
Q ss_pred HHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccc
Q 010932 448 MQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQ 492 (497)
Q Consensus 448 ~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~ 492 (497)
++||+++|+++.+|+++|.+|..+|++++|+.+|++|++++|++.
T Consensus 87 ~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 87 SEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCH
Confidence 999999999999999999999999999999999999999999976
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.1e-18 Score=156.48 Aligned_cols=136 Identities=15% Similarity=0.110 Sum_probs=124.8
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHH
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALS 433 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~ 433 (497)
..+.+...|..+...|++++|+..|++++ +++.+++.+|.++...|++++|+..|+++++ ++|+++.+|+++|.+
T Consensus 4 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~-~~P~~~~a~~~lg~~ 82 (217)
T 2pl2_A 4 AEQNPLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVA-RTPRYLGGYMVLSEA 82 (217)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCCcHHHHHHHHHH
Confidence 34567888999999999999999999988 6789999999999999999999999999999 999999999999999
Q ss_pred HHhh-----------hcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 434 YLMI-----------EQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 434 ~~~~-----------~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
+..+ |++++|+..|++|++++|+++.+|+++|.+|..+|++++|+..|++|++++ ++..+|
T Consensus 83 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~ 154 (217)
T 2pl2_A 83 YVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIR 154 (217)
T ss_dssp HHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHH
T ss_pred HHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHH
Confidence 9999 999999999999999999999999999999999999999999999999988 655443
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.75 E-value=5.3e-18 Score=140.77 Aligned_cols=112 Identities=11% Similarity=0.064 Sum_probs=107.3
Q ss_pred hHHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHH
Q 010932 356 TAVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRA 431 (497)
Q Consensus 356 ~~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g 431 (497)
+...+.+.++|..++..|++++|++.|++++ .++..++++|.+++.+|++++|+..|++||+ ++|+++.+|+++|
T Consensus 10 P~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~-~~p~~~~a~~~lg 88 (126)
T 4gco_A 10 PELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIR-LDSKFIKGYIRKA 88 (126)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHH-hhhhhhHHHHHHH
Confidence 4667889999999999999999999999999 6789999999999999999999999999999 9999999999999
Q ss_pred HHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Q 010932 432 LSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALAL 468 (497)
Q Consensus 432 ~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 468 (497)
.+|..+|++++|+.+|++|++++|++.+++..++.++
T Consensus 89 ~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 89 ACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 9999999999999999999999999999999999875
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.74 E-value=6.5e-19 Score=171.92 Aligned_cols=148 Identities=9% Similarity=0.015 Sum_probs=104.6
Q ss_pred HHHHhcCCCcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCC--------------ChhH--------HHHHHHH
Q 010932 54 LRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWP--------------DPHQ--------FVTEAAG 111 (497)
Q Consensus 54 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--------------~~~~--------~~~e~~~ 111 (497)
+....+.-.-|.+.+.||.|+||.||+|...+|+.||||+++..... .... ..+|...
T Consensus 87 L~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~n 166 (397)
T 4gyi_A 87 LHTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAF 166 (397)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHH
Confidence 34444554567888999999999999999988999999997642110 0011 1345555
Q ss_pred hccCCCCcceeeeeeeeeCCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcc
Q 010932 112 LGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYR 191 (497)
Q Consensus 112 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~N 191 (497)
|.++.+.++....-+... ..+|||||++|++|..+... .....++.||+.+|.+||..| +|||||||.|
T Consensus 167 L~rL~~~gv~vp~p~~~~--~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~g-IVHrDLKp~N 235 (397)
T 4gyi_A 167 MKALYEEGFPVPEPIAQS--RHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKHG-LIHGDFNEFN 235 (397)
T ss_dssp HHHHHHTTCSCCCEEEEE--TTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHTT-EECSCCSTTS
T ss_pred HHHHHhcCCCCCeeeecc--CceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHH
Confidence 555544333221111111 23799999999988765421 234578899999999999999 9999999999
Q ss_pred eEeCCCC----------CeeEcccCCccccC
Q 010932 192 VLFDEDG----------DPRLSSFGLMKNSR 212 (497)
Q Consensus 192 ill~~~~----------~~kl~Dfgla~~~~ 212 (497)
||++++| .+.|+||+.+....
T Consensus 236 ILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 236 ILIREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EEEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred EEEeCCCCcccccccccceEEEEeCCcccCC
Confidence 9998776 38999999877543
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.3e-18 Score=146.29 Aligned_cols=108 Identities=23% Similarity=0.274 Sum_probs=104.4
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQAL 466 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 466 (497)
.++..++.+|..++..|+|++|+..|+++++ ++|+++.+|+++|.+|..+|+|++|+..|++|++++|+++.+|+++|.
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~-~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 87 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALS-IAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGL 87 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 5678899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 467 ALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 467 ~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
+|..+|++++|+.+|++|++++|++..+|
T Consensus 88 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 116 (164)
T 3sz7_A 88 ARFDMADYKGAKEAYEKGIEAEGNGGSDA 116 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHSSSCCHH
T ss_pred HHHHccCHHHHHHHHHHHHHhCCCchHHH
Confidence 99999999999999999999999988765
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-17 Score=148.17 Aligned_cols=137 Identities=15% Similarity=0.224 Sum_probs=132.1
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHH
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALS 433 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~ 433 (497)
....+.++|..+...|++++|++.|++++ +++.+++.+|.++...|++++|+..+.+++. .+|+++.++.++|.+
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~ 82 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVV-LDTTSAEAYYILGSA 82 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHh-cCchhHHHHHHHHHH
Confidence 45678999999999999999999999999 6789999999999999999999999999999 999999999999999
Q ss_pred HHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 434 YLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 434 ~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
+...++++.|+..+.++++++|++..+++.+|.+|..+|++++|+++|+++++++|.+..+|
T Consensus 83 ~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~ 144 (184)
T 3vtx_A 83 NFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAY 144 (184)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999988776
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.4e-17 Score=152.92 Aligned_cols=135 Identities=12% Similarity=0.245 Sum_probs=128.1
Q ss_pred HHHHHhccccccccchhhhhhHHHHHHH-----HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQVQ-----DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~~-----~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
+.++..|..+...|++++|+..|+++++ +...++.+|.+++..|+|++|+..|+++++ ++|+++.+|+++|.+|
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~-~~p~~~~~~~~l~~~~ 86 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIK-KNYNLANAYIGKSAAY 86 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-TTCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHH-hCcchHHHHHHHHHHH
Confidence 6789999999999999999999999883 457888899999999999999999999999 9999999999999999
Q ss_pred HhhhcHHHHHHHHHHHHHhCCCCh-------HHHHHHHHHHHHCCChHHHHHHHHHhhcCccc--cccCC
Q 010932 435 LMIEQAELALRDAMQAQVCLPEWP-------TAFYMQALALNKLGMETDAQDMLNDGASFEAK--KQNSW 495 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~~~-------~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~--~~~~~ 495 (497)
..+|++++|+..|+++++++|+++ .+|+++|.++..+|++++|++.|++|++++|+ ...+|
T Consensus 87 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 156 (228)
T 4i17_A 87 RDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDAL 156 (228)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHH
T ss_pred HHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHH
Confidence 999999999999999999999999 77999999999999999999999999999998 76655
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.73 E-value=2.1e-17 Score=140.16 Aligned_cols=108 Identities=12% Similarity=0.071 Sum_probs=103.8
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQAL 466 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 466 (497)
+++..++.+|..++..|+|++|+..|++++. ++|+++.+|+++|.++..+|+|++|+..|++|++++|+++.+|+++|.
T Consensus 16 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~-~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 94 (142)
T 2xcb_A 16 DTLEQLYALGFNQYQAGKWDDAQKIFQALCM-LDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAE 94 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHH-hCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHH
Confidence 5778899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 467 ALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 467 ~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
+|..+|++++|+.+|++|++++|+++..+
T Consensus 95 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 123 (142)
T 2xcb_A 95 CHLQLGDLDGAESGFYSARALAAAQPAHE 123 (142)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTCGGGH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCcchH
Confidence 99999999999999999999999876543
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.73 E-value=2.4e-18 Score=170.57 Aligned_cols=138 Identities=7% Similarity=-0.013 Sum_probs=129.9
Q ss_pred HHHHHHHhccccccccc-hhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 010932 358 VHDILLKTGYKDEEGAE-NELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRAL 432 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~-~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~ 432 (497)
....+..+|..+...|. +++|+..|++++ +++.+|+++|.++...|+|++|+.+|++||+ ++|+++.+|+++|.
T Consensus 130 ~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~-ldP~~~~a~~~lg~ 208 (382)
T 2h6f_A 130 NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILN-QDAKNYHAWQHRQW 208 (382)
T ss_dssp CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHH-HCTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH-hCccCHHHHHHHHH
Confidence 45678899999999997 999999999999 6899999999999999999999999999999 99999999999999
Q ss_pred HHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-CCChHHH-----HHHHHHhhcCccccccCCC
Q 010932 433 SYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNK-LGMETDA-----QDMLNDGASFEAKKQNSWR 496 (497)
Q Consensus 433 ~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~-~~~~~~A-----~~~~~~a~~l~~~~~~~~~ 496 (497)
++..+|++++|+..|+++|+++|++..+|+++|.+|.. .|.+++| +++|++|++++|++..+|.
T Consensus 209 ~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l~P~~~~a~~ 278 (382)
T 2h6f_A 209 VIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWN 278 (382)
T ss_dssp HHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHCCCCHHHHH
Confidence 99999999999999999999999999999999999999 5555888 5999999999999988874
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.72 E-value=3e-17 Score=135.16 Aligned_cols=102 Identities=12% Similarity=0.009 Sum_probs=93.2
Q ss_pred HHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Q 010932 391 NTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNK 470 (497)
Q Consensus 391 ~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 470 (497)
.++.+|..+++.|++++|+..|+++++ ++|+++.+|+++|.++..+|++++|+..|++|++++|+++.+|+++|.+|..
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~-~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~ 97 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQ-KEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 97 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHH-HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhhcCcccccc
Q 010932 471 LGMETDAQDMLNDGASFEAKKQN 493 (497)
Q Consensus 471 ~~~~~~A~~~~~~a~~l~~~~~~ 493 (497)
+|++++|+..|+++++++|+...
T Consensus 98 ~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 98 EHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHHC-------
T ss_pred cCCHHHHHHHHHHHHHhCcCCCC
Confidence 99999999999999999998754
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.3e-17 Score=178.11 Aligned_cols=135 Identities=12% Similarity=0.076 Sum_probs=128.9
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHH
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALS 433 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~ 433 (497)
....+.++|..+...|++++|++.|++++ +++.+++++|.++..+|++++|+++|++||+ ++|+++.+|+++|.+
T Consensus 42 ~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~-l~P~~~~a~~~Lg~~ 120 (723)
T 4gyw_A 42 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQ-INPAFADAHSNLASI 120 (723)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCCCHHHHHHHHHH
Confidence 35678899999999999999999999999 6799999999999999999999999999999 999999999999999
Q ss_pred HHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccccc
Q 010932 434 YLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQN 493 (497)
Q Consensus 434 ~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~ 493 (497)
|..+|++++|+..|++|++++|+++.+|+++|.+|..+|++++|.+.|++++++.++...
T Consensus 121 ~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~~~~~ 180 (723)
T 4gyw_A 121 HKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLE 180 (723)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHHHHHHHHHHHHhChhHHh
Confidence 999999999999999999999999999999999999999999999999999998877543
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.69 E-value=3.5e-17 Score=159.90 Aligned_cols=123 Identities=14% Similarity=0.082 Sum_probs=77.5
Q ss_pred ccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc---------------HHHHHHHHH
Q 010932 372 GAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS---------------GTVFVRRAL 432 (497)
Q Consensus 372 ~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~---------------~~~~~~~g~ 432 (497)
...++.|+..|++++ +.+..++.+|..++..|+|++|+..|++|++ ++|++ +.+|+++|.
T Consensus 126 L~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~-~~p~~~~~~~~~~~~~~~~~~~~~~nla~ 204 (336)
T 1p5q_A 126 LKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVS-WLEYESSFSNEEAQKAQALRLASHLNLAM 204 (336)
T ss_dssp EEEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HTTTCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred EeecccccchhcCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HhhccccCChHHHHHHHHHHHHHHHHHHH
Confidence 344455555555443 4556666666666666666666666666666 66665 466666666
Q ss_pred HHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 433 SYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 433 ~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
||.++|+|++|+..|++|++++|+++.+|+++|.+|..+|++++|+.+|++|++++|++..+|
T Consensus 205 ~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~ 267 (336)
T 1p5q_A 205 CHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAK 267 (336)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH
Confidence 666666666666666666666666666666666666666666666666666666666655443
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.8e-17 Score=140.28 Aligned_cols=97 Identities=11% Similarity=0.002 Sum_probs=90.1
Q ss_pred HhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcH----------HHHHHHHHHHHHhCCCChHHHHHHHHHH
Q 010932 399 AFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQA----------ELALRDAMQAQVCLPEWPTAFYMQALAL 468 (497)
Q Consensus 399 ~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~----------~~A~~~~~~al~l~p~~~~a~~~~g~~~ 468 (497)
.-+.+.|++|+..|++|++ ++|+++++|+++|.++..++++ ++|+..|++||+++|+++++||++|.+|
T Consensus 12 ~~r~~~feeA~~~~~~Ai~-l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay 90 (158)
T 1zu2_A 12 FDRILLFEQIRQDAENTYK-SNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAY 90 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHH
Confidence 3467889999999999999 9999999999999999999886 5999999999999999999999999999
Q ss_pred HHCC-----------ChHHHHHHHHHhhcCccccccCCC
Q 010932 469 NKLG-----------METDAQDMLNDGASFEAKKQNSWR 496 (497)
Q Consensus 469 ~~~~-----------~~~~A~~~~~~a~~l~~~~~~~~~ 496 (497)
..+| ++++|+++|++|++++|++..+|+
T Consensus 91 ~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~ 129 (158)
T 1zu2_A 91 TSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLK 129 (158)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHH
Confidence 9985 899999999999999999876653
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.69 E-value=1e-16 Score=145.25 Aligned_cols=132 Identities=14% Similarity=0.160 Sum_probs=124.8
Q ss_pred HHHHHhccccccccchhhhhhHHHHHH-HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhh
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQV-QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIE 438 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~ 438 (497)
..++..|..+...|++++|+..|++++ .++..++++|.+++..|+|++|+..|+++++ ++|+++.+|+++|.+|..+|
T Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~-~~~~~~~~~~~lg~~~~~~~ 85 (213)
T 1hh8_A 7 ISLWNEGVLAADKKDWKGALDAFSAVQDPHSRICFNIGCMYTILKNMTEAEKAFTRSIN-RDKHLAVAYFQRGMLYYQTE 85 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTSSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCccchHHHHHHHHHHHHcc
Confidence 456788999999999999999999988 4678999999999999999999999999999 99999999999999999999
Q ss_pred cHHHHHHHHHHHHHhCCCCh----------------HHHHHHHHHHHHCCChHHHHHHHHHhhcCccccc
Q 010932 439 QAELALRDAMQAQVCLPEWP----------------TAFYMQALALNKLGMETDAQDMLNDGASFEAKKQ 492 (497)
Q Consensus 439 ~~~~A~~~~~~al~l~p~~~----------------~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~ 492 (497)
++++|+..|++++++.|++. .+++++|.+|..+|++++|+++|++|++++|+..
T Consensus 86 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 155 (213)
T 1hh8_A 86 KYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 155 (213)
T ss_dssp CHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred cHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccc
Confidence 99999999999999998877 9999999999999999999999999999999754
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.68 E-value=7.6e-17 Score=164.28 Aligned_cols=124 Identities=15% Similarity=0.150 Sum_probs=104.4
Q ss_pred cccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc---------------HHHHHHHH
Q 010932 371 EGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS---------------GTVFVRRA 431 (497)
Q Consensus 371 ~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~---------------~~~~~~~g 431 (497)
....++.|+..|+.++ +.+..++++|+.+++.|+|++|+..|++||+ ++|++ ..+|+|+|
T Consensus 246 ~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~-~~p~~~~~~~~~~~~~~~~~~~~~~nla 324 (457)
T 1kt0_A 246 TLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVS-WLEMEYGLSEKESKASESFLLAAFLNLA 324 (457)
T ss_dssp EEEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHTTCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH-HhcccccCChHHHHHHHHHHHHHHHHHH
Confidence 4556677777776655 6788888999999999999999999999999 88888 68999999
Q ss_pred HHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 432 LSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 432 ~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
.||+++|+|++|+.+|++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..+|
T Consensus 325 ~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~ 388 (457)
T 1kt0_A 325 MCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAAR 388 (457)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHH
T ss_pred HHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999887665
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.3e-16 Score=143.34 Aligned_cols=127 Identities=16% Similarity=0.131 Sum_probs=92.1
Q ss_pred ccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcH----------------HHH
Q 010932 368 KDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSG----------------TVF 427 (497)
Q Consensus 368 ~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~----------------~~~ 427 (497)
.....+.++.+.+.|+... +.+..+..+|..++..|+|++|+..|+++++ +.|+++ .+|
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~-~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (198)
T 2fbn_A 13 GRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALD-FFIHTEEWDDQILLDKKKNIEISCN 91 (198)
T ss_dssp ---------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-TTTTCTTCCCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-HHhcccccchhhHHHHHHHHHHHHH
Confidence 3344555666666555432 5677778888888888888888888888888 777776 788
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 428 VRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 428 ~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
+++|.++..+|+|++|+..|+++++++|+++.+++++|.+|..+|++++|+.+|++|++++|++..+|
T Consensus 92 ~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 159 (198)
T 2fbn_A 92 LNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIR 159 (198)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHH
Confidence 88888888888888888888888888888888888888888888888888888888888887766544
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=99.67 E-value=5.1e-16 Score=130.04 Aligned_cols=104 Identities=19% Similarity=0.244 Sum_probs=100.6
Q ss_pred HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q 010932 388 DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALA 467 (497)
Q Consensus 388 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 467 (497)
++..++..|..++..|+|++|+..|++++. ++|+++.+|+++|.++..+|++++|+..|+++++++|+++.+|+++|.+
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 86 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAIT-RNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 86 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHh-hCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHH
Confidence 467899999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhhcCccccc
Q 010932 468 LNKLGMETDAQDMLNDGASFEAKKQ 492 (497)
Q Consensus 468 ~~~~~~~~~A~~~~~~a~~l~~~~~ 492 (497)
+..+|++++|+.+|++|++++|+..
T Consensus 87 ~~~~~~~~~A~~~~~~a~~~~p~~~ 111 (137)
T 3q49_B 87 QLEMESYDEAIANLQRAYSLAKEQR 111 (137)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhhHHHHHHHHHHHHHHChhHH
Confidence 9999999999999999999999843
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.66 E-value=9.3e-17 Score=147.41 Aligned_cols=135 Identities=9% Similarity=0.036 Sum_probs=127.5
Q ss_pred HHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcH-------HHHH
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSG-------TVFV 428 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~-------~~~~ 428 (497)
..+..+|..+...|++++|+..|++++ .++..++.+|.++...|++++|+..|+++++ ++|+++ .+|+
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~-~~p~~~~~~~~~~~~~~ 121 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIK-AVPGNATIEKLYAIYYL 121 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHH-HCCCcHHHHHHHHHHHH
Confidence 456668999999999999999999999 6889999999999999999999999999999 999998 7799
Q ss_pred HHHHHHHhhhcHHHHHHHHHHHHHhCCC--ChHHHHHHHHHHHHCCCh---------------------------HHHHH
Q 010932 429 RRALSYLMIEQAELALRDAMQAQVCLPE--WPTAFYMQALALNKLGME---------------------------TDAQD 479 (497)
Q Consensus 429 ~~g~~~~~~~~~~~A~~~~~~al~l~p~--~~~a~~~~g~~~~~~~~~---------------------------~~A~~ 479 (497)
++|.++..+|++++|+..|++|++++|+ ++.+|+++|.+|..+|+. ++|+.
T Consensus 122 ~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~ 201 (228)
T 4i17_A 122 KEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVD 201 (228)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 999999999999999999 99999
Q ss_pred HHHHhhcCccccccCC
Q 010932 480 MLNDGASFEAKKQNSW 495 (497)
Q Consensus 480 ~~~~a~~l~~~~~~~~ 495 (497)
+|++|++++|++..++
T Consensus 202 ~~~~a~~l~p~~~~~~ 217 (228)
T 4i17_A 202 YLGEAVTLSPNRTEIK 217 (228)
T ss_dssp HHHHHHHHCTTCHHHH
T ss_pred HHHHHhhcCCCCHHHH
Confidence 9999999999987653
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.3e-16 Score=144.71 Aligned_cols=107 Identities=15% Similarity=0.076 Sum_probs=103.7
Q ss_pred HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHH----------------HHHHHHhhhcHHHHHHHHHHHH
Q 010932 388 DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVR----------------RALSYLMIEQAELALRDAMQAQ 451 (497)
Q Consensus 388 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~----------------~g~~~~~~~~~~~A~~~~~~al 451 (497)
.+..++.+|..++..|+|++|+..|+++++ ++|+++.+|++ +|.+|..+|++++|+..|++++
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~-~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 81 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIA-LNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELL 81 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-hCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 466789999999999999999999999999 99999999999 9999999999999999999999
Q ss_pred HhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 452 VCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 452 ~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
+++|+++.+|+++|.+|..+|++++|+.+|++|++++|++..+|
T Consensus 82 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~ 125 (208)
T 3urz_A 82 QKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAAN 125 (208)
T ss_dssp HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Confidence 99999999999999999999999999999999999999998776
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.66 E-value=2.8e-16 Score=138.19 Aligned_cols=130 Identities=12% Similarity=0.085 Sum_probs=117.1
Q ss_pred HhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHH-HHhhh
Q 010932 364 KTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALS-YLMIE 438 (497)
Q Consensus 364 ~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~-~~~~~ 438 (497)
..+..+...++++.|+..+++++ .++..++.+|..++..|+|++|+..|+++++ ++|+++.+|+++|.+ +...|
T Consensus 15 ~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~-~~p~~~~~~~~la~~l~~~~~ 93 (177)
T 2e2e_A 15 DPLHQFASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQ-LRGENAELYAALATVLYYQAS 93 (177)
T ss_dssp TTTCCCC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHCSCHHHHHHHHHHHHHHTT
T ss_pred hhhhhhhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-cCCCCHHHHHHHHHHHHHhcC
Confidence 34556777899999999999988 4688999999999999999999999999999 999999999999999 88999
Q ss_pred cH--HHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccC
Q 010932 439 QA--ELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 439 ~~--~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
++ ++|+..|+++++++|+++.+++.+|.+|..+|++++|+..|+++++++|.+...
T Consensus 94 ~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 151 (177)
T 2e2e_A 94 QHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINR 151 (177)
T ss_dssp TCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCH
T ss_pred CcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccH
Confidence 99 999999999999999999999999999999999999999999999999987543
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=6.3e-17 Score=138.67 Aligned_cols=101 Identities=11% Similarity=0.011 Sum_probs=94.0
Q ss_pred HHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCC
Q 010932 394 KFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGM 473 (497)
Q Consensus 394 ~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~ 473 (497)
.+|.++...|++++|+..|.+++. .+|+++.+++++|.+|+++|+|++|+..|++|++++|+++.+|+++|.+|..+|+
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~-~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~ 80 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTP-SPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEEN 80 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSC-SHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HhHHHHHHcChHHHHHHHHHHhcc-cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCc
Confidence 368889999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhcCccccccCC
Q 010932 474 ETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 474 ~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
+++|+.+|++|++++|++..+|
T Consensus 81 ~~~A~~~~~~al~~~p~~~~~~ 102 (150)
T 4ga2_A 81 TDKAVECYRRSVELNPTQKDLV 102 (150)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHH
T ss_pred hHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999988776
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.65 E-value=2.3e-16 Score=161.60 Aligned_cols=137 Identities=11% Similarity=0.070 Sum_probs=130.0
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHH---HHHHHHHHHHhHHhhc---------ccHHHHHHHHHHHhhcCCCCcHH
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQV---QDMLNTKKFGDIAFRD---------KDFKNAIEYYSKLVSMMSVPSGT 425 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~---~~~~~~~~~g~~~~~~---------~~~~~Ai~~~~~ai~~~~p~~~~ 425 (497)
..+.+..+|..+...|++++|++.|++++ .++..+.++|.++... |++++|+..|++|++ ++|+++.
T Consensus 136 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~-~~p~~~~ 214 (474)
T 4abn_A 136 LVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQ-MDVLDGR 214 (474)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCCHHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHH-HCTTCHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHH-hCCCCHH
Confidence 35678899999999999999999999999 3368999999999999 999999999999999 9999999
Q ss_pred HHHHHHHHHHhh--------hcHHHHHHHHHHHHHhCC---CChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccC
Q 010932 426 VFVRRALSYLMI--------EQAELALRDAMQAQVCLP---EWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 426 ~~~~~g~~~~~~--------~~~~~A~~~~~~al~l~p---~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
+|+++|.+|..+ |++++|+..|++|++++| +++.+|+++|.+|..+|++++|+++|++|++++|++..+
T Consensus 215 ~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a 294 (474)
T 4abn_A 215 SWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEP 294 (474)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 999999999999 999999999999999999 999999999999999999999999999999999998776
Q ss_pred C
Q 010932 495 W 495 (497)
Q Consensus 495 ~ 495 (497)
|
T Consensus 295 ~ 295 (474)
T 4abn_A 295 Q 295 (474)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.64 E-value=1.7e-15 Score=122.54 Aligned_cols=108 Identities=19% Similarity=0.296 Sum_probs=103.7
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQAL 466 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 466 (497)
+.+..++..|..++..|+|++|+..|++++. .+|+++.+|+++|.++..+|++++|+..++++++++|+++.+++++|.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 80 (118)
T 1elw_A 2 EQVNELKEKGNKALSVGNIDDALQCYSEAIK-LDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAA 80 (118)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHcccHHHHHHHHHHHHH-HCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 3567899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 467 ALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 467 ~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
++..+|++++|+..|+++++++|++..+|
T Consensus 81 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 109 (118)
T 1elw_A 81 ALEFLNRFEEAKRTYEEGLKHEANNPQLK 109 (118)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHcCCCCHHHH
Confidence 99999999999999999999999887665
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.5e-15 Score=126.00 Aligned_cols=108 Identities=19% Similarity=0.302 Sum_probs=95.3
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQAL 466 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 466 (497)
....+++.+|..++..|+|++|+..|+++++ .+|+++.+|+++|.++..+|++++|+..|+++++++|+++.+++++|.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~-~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~ 92 (133)
T 2lni_A 14 DLALMVKNKGNECFQKGDYPQAMKHYTEAIK-RNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAA 92 (133)
T ss_dssp CHHHHHHHHHHHHHHTTCSHHHHHHHHHHHT-TCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-cCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 3456788889999999999999999999999 889889999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 467 ALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 467 ~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
++..+|++++|+..|+++++++|.+..+|
T Consensus 93 ~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 121 (133)
T 2lni_A 93 ALEAMKDYTKAMDVYQKALDLDSSCKEAA 121 (133)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCGGGTHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHhCCCchHHH
Confidence 99999999999999999998888876554
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.8e-15 Score=139.23 Aligned_cols=137 Identities=13% Similarity=0.166 Sum_probs=124.8
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHHH------------------------------HHHHHHHHHhHHhhcccHHH
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQVQ------------------------------DMLNTKKFGDIAFRDKDFKN 407 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~------------------------------~~~~~~~~g~~~~~~~~~~~ 407 (497)
....+...|..+...+++++|+..|+++++ ++..++.+|..++..|++++
T Consensus 78 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (258)
T 3uq3_A 78 ISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPN 157 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHH
Confidence 356777788888888888888888887664 56788899999999999999
Q ss_pred HHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcC
Q 010932 408 AIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASF 487 (497)
Q Consensus 408 Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l 487 (497)
|+..|+++++ ++|+++.+|+++|.++..+|++++|+..|+++++++|+++.+|+.+|.++..+|++++|+..|++|+++
T Consensus 158 A~~~~~~a~~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 236 (258)
T 3uq3_A 158 AVKAYTEMIK-RAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTK 236 (258)
T ss_dssp HHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-cCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 9999999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c------cccccCC
Q 010932 488 E------AKKQNSW 495 (497)
Q Consensus 488 ~------~~~~~~~ 495 (497)
+ |++...|
T Consensus 237 ~~~~~~~p~~~~~~ 250 (258)
T 3uq3_A 237 DAEVNNGSSAREID 250 (258)
T ss_dssp HHHHHTTTTHHHHH
T ss_pred ChhhcCCCchHHHH
Confidence 9 6655443
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.62 E-value=9.6e-16 Score=156.94 Aligned_cols=136 Identities=10% Similarity=0.066 Sum_probs=129.1
Q ss_pred HHHHHHHhccccccccch-hhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 010932 358 VHDILLKTGYKDEEGAEN-ELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRAL 432 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~-e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~ 432 (497)
....+..+|..+...+++ ++|++.|++++ .++.+++.+|.+++..|++++|+.+|++|++ ++|+ +.+|+++|.
T Consensus 101 ~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~-~~p~-~~~~~~lg~ 178 (474)
T 4abn_A 101 EAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALT-HCKN-KVSLQNLSM 178 (474)
T ss_dssp CHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHT-TCCC-HHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-hCCC-HHHHHHHHH
Confidence 356788999999999999 99999999998 5688999999999999999999999999999 9999 799999999
Q ss_pred HHHhh---------hcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHC--------CChHHHHHHHHHhhcCcc---ccc
Q 010932 433 SYLMI---------EQAELALRDAMQAQVCLPEWPTAFYMQALALNKL--------GMETDAQDMLNDGASFEA---KKQ 492 (497)
Q Consensus 433 ~~~~~---------~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~--------~~~~~A~~~~~~a~~l~~---~~~ 492 (497)
+|..+ |++++|+..|++|++++|+++.+|+++|.+|..+ |++++|+.+|++|++++| .+.
T Consensus 179 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 258 (474)
T 4abn_A 179 VLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNP 258 (474)
T ss_dssp HHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCH
T ss_pred HHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCH
Confidence 99999 9999999999999999999999999999999999 999999999999999999 776
Q ss_pred cCC
Q 010932 493 NSW 495 (497)
Q Consensus 493 ~~~ 495 (497)
.+|
T Consensus 259 ~~~ 261 (474)
T 4abn_A 259 DLH 261 (474)
T ss_dssp HHH
T ss_pred HHH
Confidence 655
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.61 E-value=3.5e-15 Score=126.30 Aligned_cols=107 Identities=23% Similarity=0.219 Sum_probs=101.4
Q ss_pred HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc---HHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHH
Q 010932 388 DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS---GTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQ 464 (497)
Q Consensus 388 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~---~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 464 (497)
++..++.+|..++..|+|++|+..|+++++ ++|++ ..+|+++|.+|..+|++++|+..|+++++++|+++.+|+++
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 105 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALG-LDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRR 105 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-HcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHH
Confidence 456788999999999999999999999999 99998 89999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 465 ALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 465 g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
|.++..+|++++|+..|+++++++|++..+|
T Consensus 106 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 136 (148)
T 2dba_A 106 SQALEKLGRLDQAVLDLQRCVSLEPKNKVFQ 136 (148)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCSSCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCcHHHH
Confidence 9999999999999999999999999887765
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.61 E-value=2.6e-15 Score=139.48 Aligned_cols=139 Identities=12% Similarity=0.084 Sum_probs=121.4
Q ss_pred hHHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHH
Q 010932 356 TAVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRA 431 (497)
Q Consensus 356 ~~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g 431 (497)
......+...|..+...|++++|+..|++++ .++..++..|..+...|++++|+..|+++++ ++|++..+|+++|
T Consensus 34 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~la 112 (252)
T 2ho1_A 34 DEARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALA-SDSRNARVLNNYG 112 (252)
T ss_dssp HHHHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-HCcCcHHHHHHHH
Confidence 3447888889999999999999999999888 4677888999999999999999999999999 8898899999999
Q ss_pred HHHHhhhcHHHHHHHHHHHHH--hCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 432 LSYLMIEQAELALRDAMQAQV--CLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 432 ~~~~~~~~~~~A~~~~~~al~--l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
.++..+|++++|+..|+++++ .+|.++.+++.+|.++..+|++++|+..|+++++++|....+|
T Consensus 113 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~ 178 (252)
T 2ho1_A 113 GFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVA 178 (252)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHH
Confidence 999999999999999999998 8888889999999999999999999999999988888765443
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.61 E-value=5.1e-15 Score=122.48 Aligned_cols=130 Identities=15% Similarity=0.231 Sum_probs=121.7
Q ss_pred HHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHH
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYL 435 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~ 435 (497)
+.+...|..+...|++++|+..|++++ .+...++..|..+...|++++|+..|++++. .+|.++.+|+++|.++.
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~l~~~~~ 80 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALE-LDPRSAEAWYNLGNAYY 80 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHH-HCCCchHHHHHHHHHHH
Confidence 346677788888899999999999987 4677889999999999999999999999999 99999999999999999
Q ss_pred hhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccc
Q 010932 436 MIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAK 490 (497)
Q Consensus 436 ~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~ 490 (497)
..|++++|+..+++++++.|++..+++.+|.++..+|++++|+..|+++++++|+
T Consensus 81 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 81 KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR 135 (136)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTT
T ss_pred HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999999999999999999999999999999998875
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.60 E-value=6.1e-15 Score=127.43 Aligned_cols=131 Identities=14% Similarity=0.025 Sum_probs=115.9
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRAL 432 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~ 432 (497)
.....+...|..+...++++.|+..|.+++ .++..++.+|.+++..|+|++|+..|+++++ ++|+++.+|+++|.
T Consensus 11 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~a~ 89 (166)
T 1a17_A 11 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIE-LDKKYIKGYYRRAA 89 (166)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCcccHHHHHHHHH
Confidence 456778889999999999999999999988 4688899999999999999999999999999 99999999999999
Q ss_pred HHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHH--HHHHCCChHHHHHHHHHhhcCc
Q 010932 433 SYLMIEQAELALRDAMQAQVCLPEWPTAFYMQAL--ALNKLGMETDAQDMLNDGASFE 488 (497)
Q Consensus 433 ~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~--~~~~~~~~~~A~~~~~~a~~l~ 488 (497)
++..+|++++|+..|+++++++|++..++..++. .+..+|++++|++.++++..+-
T Consensus 90 ~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 147 (166)
T 1a17_A 90 SNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVV 147 (166)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHh
Confidence 9999999999999999999999999988855544 4888899999999999887654
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.60 E-value=2.1e-15 Score=147.34 Aligned_cols=135 Identities=13% Similarity=0.052 Sum_probs=67.8
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHH----HHH-----------------HHHHHHHhHHhhcccHHHHHHHHHHH
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQV----QDM-----------------LNTKKFGDIAFRDKDFKNAIEYYSKL 415 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~-----------------~~~~~~g~~~~~~~~~~~Ai~~~~~a 415 (497)
.....+...|..++..++++.|+..|++++ .+. ..++++|.+++++|+|++|+.+|++|
T Consensus 177 ~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~a 256 (338)
T 2if4_A 177 GAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIV 256 (338)
T ss_dssp HHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 345566677777777777777777777766 222 26667777777777777777777777
Q ss_pred hhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHH-HHHCCChHHHHHHHHHhhcCccccc
Q 010932 416 VSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALA-LNKLGMETDAQDMLNDGASFEAKKQ 492 (497)
Q Consensus 416 i~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~-~~~~~~~~~A~~~~~~a~~l~~~~~ 492 (497)
|+ ++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..++..++.+ ....+.+++|...|++++.++|++.
T Consensus 257 l~-~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~ 333 (338)
T 2if4_A 257 LT-EEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGG 333 (338)
T ss_dssp HH-HCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------------------------------------
T ss_pred HH-hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCC
Confidence 77 7777777777777777777777777777777777777777777777766 4445566666777777777766543
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.60 E-value=3.4e-15 Score=137.60 Aligned_cols=132 Identities=14% Similarity=0.112 Sum_probs=68.7
Q ss_pred HHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHH
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYL 435 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~ 435 (497)
..+...|..+...|++++|+..|++++ .+...+...|..+...|++++|+..|+++++ .+|+++.+|+++|.++.
T Consensus 58 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~~a~~~~ 136 (243)
T 2q7f_A 58 IPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALR-AGMENGDLFYMLGTVLV 136 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HTCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHH
Confidence 344444455555555555555555544 2344445555555555555555555555555 55555555555555555
Q ss_pred hhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccc
Q 010932 436 MIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQ 492 (497)
Q Consensus 436 ~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~ 492 (497)
.+|++++|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|+..
T Consensus 137 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 193 (243)
T 2q7f_A 137 KLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHA 193 (243)
T ss_dssp HTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCH
T ss_pred HhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccH
Confidence 555555555555555555555555555555555555555555555555555544443
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.60 E-value=2.8e-15 Score=146.36 Aligned_cols=129 Identities=14% Similarity=0.142 Sum_probs=120.2
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHH----HH---------------HHHHHHHHhHHhhcccHHHHHHHHHHHhh
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQV----QD---------------MLNTKKFGDIAFRDKDFKNAIEYYSKLVS 417 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~---------------~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~ 417 (497)
.....+..+|..+...+++++|+..|++++ .+ +..++++|.++++.|+|++|+.+|++||+
T Consensus 145 ~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 224 (336)
T 1p5q_A 145 EQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALE 224 (336)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 466788999999999999999999999998 23 68999999999999999999999999999
Q ss_pred cCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHH-HHHHHHhhc
Q 010932 418 MMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDA-QDMLNDGAS 486 (497)
Q Consensus 418 ~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A-~~~~~~a~~ 486 (497)
++|+++.+|+++|.+|..+|++++|+.+|++|++++|++..+++++|.++..+|++++| ...|++.+.
T Consensus 225 -~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~ 293 (336)
T 1p5q_A 225 -LDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFE 293 (336)
T ss_dssp -HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -hCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 456666553
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.59 E-value=5.5e-15 Score=141.33 Aligned_cols=137 Identities=15% Similarity=0.055 Sum_probs=118.8
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHHH----------HHHHHHHHHhHHhhc-ccHHHHHHHHHHHhhcCCCCc--
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQVQ----------DMLNTKKFGDIAFRD-KDFKNAIEYYSKLVSMMSVPS-- 423 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~----------~~~~~~~~g~~~~~~-~~~~~Ai~~~~~ai~~~~p~~-- 423 (497)
.....+.+.|..+...|++++|+..|+++++ .+..+.+.|.++... |++++|+.+|++|++ +.|.+
T Consensus 75 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~-~~~~~~~ 153 (292)
T 1qqe_A 75 EAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGE-WYAQDQS 153 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH-HHHHTTC
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH-HHHhCCC
Confidence 4467888999999999999999999999982 256889999999996 999999999999999 87754
Q ss_pred ----HHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChH-------HHHHHHHHHHHCCChHHHHHHHHHhhcCccccc
Q 010932 424 ----GTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPT-------AFYMQALALNKLGMETDAQDMLNDGASFEAKKQ 492 (497)
Q Consensus 424 ----~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~-------a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~ 492 (497)
+.+|.++|.++..+|+|++|+..|++++++.|++.. +|+++|.++..+|++++|+.+|++|++++|...
T Consensus 154 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 233 (292)
T 1qqe_A 154 VALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFA 233 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-----
T ss_pred hHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Confidence 578999999999999999999999999999998754 689999999999999999999999999999876
Q ss_pred cC
Q 010932 493 NS 494 (497)
Q Consensus 493 ~~ 494 (497)
.+
T Consensus 234 ~~ 235 (292)
T 1qqe_A 234 DS 235 (292)
T ss_dssp --
T ss_pred Cc
Confidence 54
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.59 E-value=4.5e-15 Score=139.19 Aligned_cols=134 Identities=8% Similarity=0.021 Sum_probs=124.1
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHHH----H---HHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc---HHHH
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQVQ----D---MLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS---GTVF 427 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~----~---~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~---~~~~ 427 (497)
..+.++..|..+...|++++|+..|++.++ + +.+++.+|.+++..|+|++|+..|+++++ +.|++ +.++
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~-~~p~~~~~~~a~ 92 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQ-IYQIDPRVPQAE 92 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCTTHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHH-HCCCCchhHHHH
Confidence 357789999999999999999999999983 3 88999999999999999999999999999 87754 6799
Q ss_pred HHHHHHHHh--------hhcHHHHHHHHHHHHHhCCCChHHH-----------------HHHHHHHHHCCChHHHHHHHH
Q 010932 428 VRRALSYLM--------IEQAELALRDAMQAQVCLPEWPTAF-----------------YMQALALNKLGMETDAQDMLN 482 (497)
Q Consensus 428 ~~~g~~~~~--------~~~~~~A~~~~~~al~l~p~~~~a~-----------------~~~g~~~~~~~~~~~A~~~~~ 482 (497)
+++|.+++. +|++++|+..|+++++++|++..++ +.+|.+|..+|+|++|+..|+
T Consensus 93 ~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 172 (261)
T 3qky_A 93 YERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYE 172 (261)
T ss_dssp HHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 999999999 9999999999999999999997766 999999999999999999999
Q ss_pred HhhcCccccc
Q 010932 483 DGASFEAKKQ 492 (497)
Q Consensus 483 ~a~~l~~~~~ 492 (497)
++++..|+..
T Consensus 173 ~~l~~~p~~~ 182 (261)
T 3qky_A 173 AVFDAYPDTP 182 (261)
T ss_dssp HHHHHCTTST
T ss_pred HHHHHCCCCc
Confidence 9999998743
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.59 E-value=8.6e-15 Score=120.62 Aligned_cols=108 Identities=19% Similarity=0.306 Sum_probs=96.1
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQAL 466 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 466 (497)
.++..++..|..++..|++++|+..|+++++ .+|+++.+|+++|.++..+|++++|+..++++++++|+++.+++.+|.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 88 (131)
T 2vyi_A 10 AEAERLKTEGNEQMKVENFEAAVHFYGKAIE-LNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGL 88 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHccCHHHHHHHHHHHHH-cCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHH
Confidence 5677888899999999999999999999999 889889999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 467 ALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 467 ~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
++..+|++++|+..|+++++++|++..+|
T Consensus 89 ~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 117 (131)
T 2vyi_A 89 ALSSLNKHVEAVAYYKKALELDPDNETYK 117 (131)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHhcCccchHHH
Confidence 99999999999999999999888776554
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=99.59 E-value=4.4e-15 Score=141.17 Aligned_cols=106 Identities=19% Similarity=0.233 Sum_probs=101.6
Q ss_pred HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q 010932 388 DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALA 467 (497)
Q Consensus 388 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 467 (497)
++..++.+|..++..|+|++|+..|++|++ ++|+++.+|+++|.+|..+|++++|+.+|++|++++|+++.+++++|.+
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~-~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAIT-RNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 356889999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhhcCccccccC
Q 010932 468 LNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 468 ~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
|..+|++++|+..|++|++++|++...
T Consensus 82 ~~~~g~~~~A~~~~~~al~l~p~~~~~ 108 (281)
T 2c2l_A 82 QLEMESYDEAIANLQRAYSLAKEQRLN 108 (281)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHcCCHHHHHHHHHHHHHhCccchhh
Confidence 999999999999999999999987543
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=99.59 E-value=3.8e-15 Score=123.25 Aligned_cols=104 Identities=13% Similarity=0.109 Sum_probs=98.8
Q ss_pred HHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcH---HHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCC---hHHHHH
Q 010932 390 LNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSG---TVFVRRALSYLMIEQAELALRDAMQAQVCLPEW---PTAFYM 463 (497)
Q Consensus 390 ~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~---~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~---~~a~~~ 463 (497)
..++.+|..++..|+|++|+..|+++++ .+|+++ .+++++|.++..+|+|++|+..|+++++++|++ +.+++.
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~-~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~ 81 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLE-LYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLK 81 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHH-HCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHH-HCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHH
Confidence 4578999999999999999999999999 999988 899999999999999999999999999999999 999999
Q ss_pred HHHHHHHCCChHHHHHHHHHhhcCccccccC
Q 010932 464 QALALNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 464 ~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
+|.++..+|++++|+..|+++++..|+...+
T Consensus 82 la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~ 112 (129)
T 2xev_A 82 LGLSQYGEGKNTEAQQTLQQVATQYPGSDAA 112 (129)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTSHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCCCChHH
Confidence 9999999999999999999999999886644
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.59 E-value=7.6e-15 Score=128.80 Aligned_cols=135 Identities=10% Similarity=0.071 Sum_probs=126.5
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
...+...|..+...|++++|+..+++++ .+...+...|..++..|++++|+..|+++++ .+|+++.+++++|.++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~~a~~~ 120 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAE-ANPINFNVRFRLGVAL 120 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHh-cCcHhHHHHHHHHHHH
Confidence 3567778888888999999999999988 4578899999999999999999999999999 9999999999999999
Q ss_pred HhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccC
Q 010932 435 LMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
..+|++++|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|+....
T Consensus 121 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 180 (186)
T 3as5_A 121 DNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALPHFKKANELDEGASVE 180 (186)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCCCGG
T ss_pred HHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchhh
Confidence 999999999999999999999999999999999999999999999999999999887654
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.59 E-value=2.5e-15 Score=148.49 Aligned_cols=113 Identities=15% Similarity=0.173 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhc---------------CCCCcHHHHHHHHHHHHhhhcHHHHHHH
Q 010932 382 WTQQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSM---------------MSVPSGTVFVRRALSYLMIEQAELALRD 446 (497)
Q Consensus 382 ~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~---------------~~p~~~~~~~~~g~~~~~~~~~~~A~~~ 446 (497)
++..++.+..++.+|+.+++.|+|++|+..|++|+++ ++|.++.+|+|+|.+|+++|+|++|+.+
T Consensus 216 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~ 295 (370)
T 1ihg_A 216 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDS 295 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 3444455555666666666666666666666666641 3444455666666666666666666666
Q ss_pred HHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccC
Q 010932 447 AMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 447 ~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
|++|++++|+++.+|+++|.+|..+|++++|+.+|++|++++|++..+
T Consensus 296 ~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~ 343 (370)
T 1ihg_A 296 CLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAI 343 (370)
T ss_dssp HHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHH
Confidence 666666666666666666666666666666666666666666554433
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.58 E-value=5.3e-15 Score=126.45 Aligned_cols=101 Identities=10% Similarity=-0.037 Sum_probs=97.0
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRAL 432 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~ 432 (497)
...+.++..|..+...|++++|+..|++++ .++.+|+++|.++...|+|++|+.+|++|++ ++|+++.+|+++|.
T Consensus 34 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~-l~P~~~~~~~~lg~ 112 (151)
T 3gyz_A 34 DMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFA-LGKNDYTPVFHTGQ 112 (151)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HSSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHh-hCCCCcHHHHHHHH
Confidence 556789999999999999999999999999 6799999999999999999999999999999 99999999999999
Q ss_pred HHHhhhcHHHHHHHHHHHHHhCCCCh
Q 010932 433 SYLMIEQAELALRDAMQAQVCLPEWP 458 (497)
Q Consensus 433 ~~~~~~~~~~A~~~~~~al~l~p~~~ 458 (497)
||..+|++++|+..|++|++++|+..
T Consensus 113 ~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 113 CQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999999875
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.5e-14 Score=135.99 Aligned_cols=127 Identities=13% Similarity=-0.029 Sum_probs=110.1
Q ss_pred hccccccccchhhhhhHHHHHH--------HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHh
Q 010932 365 TGYKDEEGAENELSFQEWTQQV--------QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLM 436 (497)
Q Consensus 365 ~g~~~~~~~~~e~a~~~~~~~~--------~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~ 436 (497)
.+......+++++|+..|++++ .++..++.+|..++..|++++|+..|+++++ ++|+++.+|+++|.++..
T Consensus 11 ~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~-~~~~~~~~~~~la~~~~~ 89 (275)
T 1xnf_A 11 LAVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALA-IRPDMPEVFNYLGIYLTQ 89 (275)
T ss_dssp SCCCCCCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHH
T ss_pred eeeccCccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHH-cCCCcHHHHHHHHHHHHH
Confidence 3445566788888888888877 3577888899999999999999999999999 899999999999999999
Q ss_pred hhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccc
Q 010932 437 IEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQ 492 (497)
Q Consensus 437 ~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~ 492 (497)
+|++++|+..|+++++++|+++.+|+.+|.+|..+|++++|+..|+++++++|+..
T Consensus 90 ~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 145 (275)
T 1xnf_A 90 AGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDP 145 (275)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred ccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCh
Confidence 99999999999999999999999999999999999999999999999998888765
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.5e-15 Score=155.41 Aligned_cols=137 Identities=13% Similarity=0.041 Sum_probs=123.8
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHH
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALS 433 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~ 433 (497)
..+.+..+|..+...+++++|++.|++++ .++..++++|.++++.|+|++|+..|++|++ ++|+++.+|+++|.+
T Consensus 5 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~-l~p~~~~~~~~lg~~ 83 (477)
T 1wao_1 5 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIE-LDKKYIKGYYRRAAS 83 (477)
T ss_dssp HHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-SCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHH-hCCCCHHHHHHHHHH
Confidence 44567789999999999999999999998 5689999999999999999999999999999 999999999999999
Q ss_pred HHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHH--HHHCCChHHHHHHHH-----------HhhcCccccccCC
Q 010932 434 YLMIEQAELALRDAMQAQVCLPEWPTAFYMQALA--LNKLGMETDAQDMLN-----------DGASFEAKKQNSW 495 (497)
Q Consensus 434 ~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~--~~~~~~~~~A~~~~~-----------~a~~l~~~~~~~~ 495 (497)
|..+|++++|+..|++|++++|++..++.++|.+ +..+|++++|++.++ +|++++|+...+|
T Consensus 84 ~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 158 (477)
T 1wao_1 84 NMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPK 158 (477)
T ss_dssp HHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCCSCC
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccccccc
Confidence 9999999999999999999999999999999999 999999999999999 8888888876654
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.58 E-value=4.6e-15 Score=130.19 Aligned_cols=137 Identities=12% Similarity=0.098 Sum_probs=128.4
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHH
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALS 433 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~ 433 (497)
....+...|..+...|++++|+..|++++ .++..++..|..++..|++++|+..|+++++ .+|+++.+|+++|.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~~a~~ 85 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLA-DAPDNVKVATVLGLT 85 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHh-cCCCCHHHHHHHHHH
Confidence 45677888999999999999999999987 5688999999999999999999999999999 999999999999999
Q ss_pred HHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 434 YLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 434 ~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
+...|++++|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|....+|
T Consensus 86 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 147 (186)
T 3as5_A 86 YVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVH 147 (186)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHH
Confidence 99999999999999999999999999999999999999999999999999999988776544
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.57 E-value=8.5e-15 Score=126.49 Aligned_cols=110 Identities=22% Similarity=0.291 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHH
Q 010932 385 QVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQ 464 (497)
Q Consensus 385 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 464 (497)
..+.+..++.+|..++..|+|++|+..|+++++ ++|+++.+|+++|.++..+|++++|+..|+++++++|+++.+|+++
T Consensus 9 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 87 (166)
T 1a17_A 9 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIE-LNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 87 (166)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH-hCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 347788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 465 ALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 465 g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
|.++..+|++++|+..|+++++++|++..+|
T Consensus 88 a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 118 (166)
T 1a17_A 88 AASNMALGKFRAALRDYETVVKVKPHDKDAK 118 (166)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999999877654
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.57 E-value=6.3e-15 Score=118.04 Aligned_cols=103 Identities=12% Similarity=0.119 Sum_probs=98.1
Q ss_pred HHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCC--ChHHHHHHHH
Q 010932 389 MLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPE--WPTAFYMQAL 466 (497)
Q Consensus 389 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~--~~~a~~~~g~ 466 (497)
+..++.+|..++..|++++|+..|+++++ ++|+++.+|+++|.++..+|++++|+..|+++++++|+ +..+++++|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~ 84 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQ-LDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKAD 84 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHH-hCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHH
Confidence 34577899999999999999999999999 99999999999999999999999999999999999999 9999999999
Q ss_pred HHHHC-CChHHHHHHHHHhhcCccccc
Q 010932 467 ALNKL-GMETDAQDMLNDGASFEAKKQ 492 (497)
Q Consensus 467 ~~~~~-~~~~~A~~~~~~a~~l~~~~~ 492 (497)
++..+ |++++|+++|++++...|...
T Consensus 85 ~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 85 ALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 99999 999999999999999988653
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.57 E-value=5e-15 Score=145.78 Aligned_cols=131 Identities=13% Similarity=0.120 Sum_probs=116.7
Q ss_pred HHHHHhccccccccchhhhhhHHHHHHH------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHH
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQVQ------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALS 433 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~ 433 (497)
..+...|..+...|++++|++.|+++++ ++..++.+|..+...|++++|+..|+++++ ++|+++.+|+++|.+
T Consensus 178 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~-~~p~~~~~~~~l~~~ 256 (365)
T 4eqf_A 178 GLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALT-VRPEDYSLWNRLGAT 256 (365)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-hCCCCHHHHHHHHHH
Confidence 3455668899999999999999999983 688999999999999999999999999999 999999999999999
Q ss_pred HHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccc
Q 010932 434 YLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKK 491 (497)
Q Consensus 434 ~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~ 491 (497)
|..+|++++|+..|+++++++|+++.+|+++|.+|..+|++++|+..|++|++++|+.
T Consensus 257 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 257 LANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRKS 314 (365)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC
T ss_pred HHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999999999999999999999999999999999999884
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.57 E-value=6.1e-15 Score=135.87 Aligned_cols=136 Identities=11% Similarity=0.059 Sum_probs=128.0
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
...+...|..+...|++++|++.|++++ .+...+...|..++..|++++|+..|+++++ .+|+++.+++++|.++
T Consensus 91 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~l~~~~ 169 (243)
T 2q7f_A 91 ATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVE-LNENDTEARFQFGMCL 169 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHH-hCCccHHHHHHHHHHH
Confidence 3556777888888999999999999988 4678899999999999999999999999999 9999999999999999
Q ss_pred HhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 435 LMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
..+|++++|+..|+++++++|+++.+++.+|.++..+|++++|+..|+++++++|++..+|
T Consensus 170 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 230 (243)
T 2q7f_A 170 ANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREKALEMLDKAIDIQPDHMLAL 230 (243)
T ss_dssp HHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHCTTCHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHccCcchHHHH
Confidence 9999999999999999999999999999999999999999999999999999999987765
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.57 E-value=1.2e-15 Score=129.35 Aligned_cols=109 Identities=11% Similarity=0.078 Sum_probs=98.3
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHH----H------------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcC--
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQV----Q------------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMM-- 419 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~------------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~-- 419 (497)
..+.+...|..++..|++++|+..|++++ + ++..|.++|.++..+|+|++|+.+|++||+ +
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~-l~n 88 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALH-YFN 88 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-hhh
Confidence 45778899999999999999999999999 2 133999999999999999999999999999 9
Q ss_pred -----CCCcHHHH----HHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q 010932 420 -----SVPSGTVF----VRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALA 467 (497)
Q Consensus 420 -----~p~~~~~~----~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 467 (497)
+|+++.+| +++|.++..+|++++|+.+|++|++++|++..++-.+..+
T Consensus 89 ~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~ 145 (159)
T 2hr2_A 89 RRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERM 145 (159)
T ss_dssp HHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHH
T ss_pred ccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 99999999 9999999999999999999999999999997655444443
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.57 E-value=6.3e-15 Score=146.43 Aligned_cols=136 Identities=12% Similarity=0.044 Sum_probs=118.4
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
...+...|..+...|++++|++.|++++ .++..+..+|..+...|++++|+..|+++++ ++|+++.+|.++|.++
T Consensus 237 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~-~~p~~~~~~~~l~~~~ 315 (388)
T 1w3b_A 237 AVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALR-LCPTHADSLNNLANIK 315 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-hCcccHHHHHHHHHHH
Confidence 3456677888888888999999998888 4577888899999999999999999999999 8898899999999999
Q ss_pred HhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 435 LMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
..+|++++|+..|+++++++|+++.+++++|.+|..+|++++|+..|++|++++|+...+|
T Consensus 316 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~a~ 376 (388)
T 1w3b_A 316 REQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAY 376 (388)
T ss_dssp HTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999988877665
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.57 E-value=1.4e-14 Score=143.97 Aligned_cols=136 Identities=10% Similarity=0.027 Sum_probs=127.6
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
.+.+...|..+...+.+++|+..|.+++ +++..+..+|..+...|++++|+..|+++++ ++|+++.+|+++|.++
T Consensus 203 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~-~~p~~~~~~~~l~~~~ 281 (388)
T 1w3b_A 203 LDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIE-LQPHFPDAYCNLANAL 281 (388)
T ss_dssp HHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-TCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-hCCCCHHHHHHHHHHH
Confidence 4567888999999999999999999988 4688899999999999999999999999999 9999999999999999
Q ss_pred HhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 435 LMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
.++|++++|+..|+++++++|+++.+|+++|.++...|++++|+..|+++++++|+...+|
T Consensus 282 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 342 (388)
T 1w3b_A 282 KEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAH 342 (388)
T ss_dssp HHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHH
T ss_pred HHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 9999999999999999999999999999999999999999999999999999999876554
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.1e-14 Score=120.19 Aligned_cols=113 Identities=12% Similarity=0.018 Sum_probs=107.0
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHH
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALS 433 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~ 433 (497)
..+.+...|..+...|++++|+..|++++ .++..++++|.+++..|+|++|+..|+++++ ++|+++.+|+++|.+
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-~~p~~~~~~~~lg~~ 81 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIE-KDPNFVRAYIRKATA 81 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHH-hCCCcHHHHHHHHHH
Confidence 45678899999999999999999999998 5789999999999999999999999999999 999999999999999
Q ss_pred HHhhhcHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHC
Q 010932 434 YLMIEQAELALRDAMQAQVCL------PEWPTAFYMQALALNKL 471 (497)
Q Consensus 434 ~~~~~~~~~A~~~~~~al~l~------p~~~~a~~~~g~~~~~~ 471 (497)
+..+|++++|+..|+++++++ |++..++..++.+..++
T Consensus 82 ~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 82 QIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred HHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 999999999999999999999 99999999999887664
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.1e-14 Score=135.16 Aligned_cols=136 Identities=18% Similarity=0.146 Sum_probs=125.5
Q ss_pred HHHHHhccccccccchhhhhhHHHHHHH----H-------HHHHHHHHhHHhhcccHHHHHHHHHHHhhc----------
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQVQ----D-------MLNTKKFGDIAFRDKDFKNAIEYYSKLVSM---------- 418 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~~----~-------~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~---------- 418 (497)
..+...|..+...|++++|+..|+++++ . +..++.+|..+...|++++|+..|+++++.
T Consensus 39 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 118 (258)
T 3uq3_A 39 TYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKL 118 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHH
Confidence 4678889999999999999999999882 2 688999999999999999999999999983
Q ss_pred ---------------CCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHH
Q 010932 419 ---------------MSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLND 483 (497)
Q Consensus 419 ---------------~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 483 (497)
.+|.++.+|+++|.++..+|++++|+..|+++++++|+++.+|+.+|.++..+|++++|+..|++
T Consensus 119 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 198 (258)
T 3uq3_A 119 RNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNK 198 (258)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 45667889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCccccccCC
Q 010932 484 GASFEAKKQNSW 495 (497)
Q Consensus 484 a~~l~~~~~~~~ 495 (497)
+++++|+...+|
T Consensus 199 al~~~~~~~~~~ 210 (258)
T 3uq3_A 199 AIEKDPNFVRAY 210 (258)
T ss_dssp HHHHCTTCHHHH
T ss_pred HHHhCHHHHHHH
Confidence 999999877665
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.3e-15 Score=122.87 Aligned_cols=92 Identities=12% Similarity=0.093 Sum_probs=70.4
Q ss_pred hcccHHHHHHHHHHHhhcC---CCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHH
Q 010932 401 RDKDFKNAIEYYSKLVSMM---SVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDA 477 (497)
Q Consensus 401 ~~~~~~~Ai~~~~~ai~~~---~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A 477 (497)
..|++++|+..|++|++ + +|+++.+|+++|.+|..+|+|++|+..|+++++++|+++.+++++|.+|..+|++++|
T Consensus 2 ~~g~~~~A~~~~~~al~-~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIA-SGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp -----CCCHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCcHHHHHHHHHHHHH-cCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHH
Confidence 35778888888888888 7 5777788888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHhhcCcccccc
Q 010932 478 QDMLNDGASFEAKKQN 493 (497)
Q Consensus 478 ~~~~~~a~~l~~~~~~ 493 (497)
+..|++|++++|+++.
T Consensus 81 ~~~~~~al~~~p~~~~ 96 (117)
T 3k9i_A 81 VELLLKIIAETSDDET 96 (117)
T ss_dssp HHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHHhCCCcHH
Confidence 8888888877776543
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.56 E-value=9.8e-15 Score=136.89 Aligned_cols=135 Identities=14% Similarity=-0.007 Sum_probs=124.9
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHHH-------HHHHHHHHHhHHhh--------cccHHHHHHHHHHHhhcCCCC
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQVQ-------DMLNTKKFGDIAFR--------DKDFKNAIEYYSKLVSMMSVP 422 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~-------~~~~~~~~g~~~~~--------~~~~~~Ai~~~~~ai~~~~p~ 422 (497)
..+.++.+|..+...|++++|+..|+++++ .+.+++.+|.+++. .|++++|+..|+++++ ..|+
T Consensus 51 ~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~-~~p~ 129 (261)
T 3qky_A 51 AADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFID-RYPN 129 (261)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHH-HCTT
T ss_pred hHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHH-HCcC
Confidence 357789999999999999999999999984 37789999999999 9999999999999999 9999
Q ss_pred cHHHH-----------------HHHHHHHHhhhcHHHHHHHHHHHHHhCCC---ChHHHHHHHHHHHHC----------C
Q 010932 423 SGTVF-----------------VRRALSYLMIEQAELALRDAMQAQVCLPE---WPTAFYMQALALNKL----------G 472 (497)
Q Consensus 423 ~~~~~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~p~---~~~a~~~~g~~~~~~----------~ 472 (497)
+..++ +++|.+|..+|+|++|+..|+++++..|+ .+.+++.+|.+|..+ |
T Consensus 130 ~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~ 209 (261)
T 3qky_A 130 HELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPE 209 (261)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccc
Confidence 87666 89999999999999999999999999999 578999999999988 9
Q ss_pred ChHHHHHHHHHhhcCcccccc
Q 010932 473 METDAQDMLNDGASFEAKKQN 493 (497)
Q Consensus 473 ~~~~A~~~~~~a~~l~~~~~~ 493 (497)
++++|+..|+++++..|+...
T Consensus 210 ~~~~A~~~~~~~~~~~p~~~~ 230 (261)
T 3qky_A 210 RYRRAVELYERLLQIFPDSPL 230 (261)
T ss_dssp HHHHHHHHHHHHHHHCTTCTH
T ss_pred hHHHHHHHHHHHHHHCCCChH
Confidence 999999999999999998753
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=1.4e-14 Score=151.86 Aligned_cols=136 Identities=10% Similarity=-0.018 Sum_probs=129.0
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
...+...|..+...|++++|++.|++++ +++..++.+|..+...|++++|+..|+++++ ++|+++.+|+++|.+|
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~-~~p~~~~~~~~la~~~ 101 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASD-AAPEHPGIALWLGHAL 101 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHh-cCCCCHHHHHHHHHHH
Confidence 4678888999999999999999999999 6789999999999999999999999999999 9999999999999999
Q ss_pred HhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHC---CChHHHHHHHHHhhcCccccccCC
Q 010932 435 LMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKL---GMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~---~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
..+|++++|++.|+++++++|+++.+++++|.++..+ |++++|++.|+++++++|.....|
T Consensus 102 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 165 (568)
T 2vsy_A 102 EDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVGAVEPF 165 (568)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCCCSCHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCcccChH
Confidence 9999999999999999999999999999999999999 999999999999999999865543
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.1e-14 Score=126.05 Aligned_cols=120 Identities=10% Similarity=0.030 Sum_probs=108.4
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHHHH----------------------HHHHHHHHhHHhhcccHHHHHHHHHH
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQVQD----------------------MLNTKKFGDIAFRDKDFKNAIEYYSK 414 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~~----------------------~~~~~~~g~~~~~~~~~~~Ai~~~~~ 414 (497)
.....+...|..++..|+++.|+..|++++.. +..++++|.+++..|+|++|+..|++
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 45678999999999999999999999999853 46889999999999999999999999
Q ss_pred HhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCCh-HHHHHHHHHHHHCCChHHH
Q 010932 415 LVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWP-TAFYMQALALNKLGMETDA 477 (497)
Q Consensus 415 ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~-~a~~~~g~~~~~~~~~~~A 477 (497)
||+ ++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++. .+...++.+...+++++++
T Consensus 89 al~-~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~~~ 151 (162)
T 3rkv_A 89 VLK-REETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKKAD 151 (162)
T ss_dssp HHH-HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHh-cCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999 9999999999999999999999999999999999999998 6677888877766555433
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.55 E-value=6.3e-15 Score=138.46 Aligned_cols=132 Identities=7% Similarity=-0.095 Sum_probs=72.7
Q ss_pred HHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCC---cHHHHHHHHHHH
Q 010932 362 LLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVP---SGTVFVRRALSY 434 (497)
Q Consensus 362 ~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~---~~~~~~~~g~~~ 434 (497)
+...|..+...|+++.|+..|++++ +++..++.+|..++..|+|++|+..|+++++ ..++ .+.+|+++|.++
T Consensus 6 ~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~ 84 (272)
T 3u4t_A 6 EFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKIL 84 (272)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHH
Confidence 3444555555555555555555555 2344555555555555555555555555555 3211 123355555555
Q ss_pred HhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccC
Q 010932 435 LMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
..+|++++|+..|+++++++|+++.+|+.+|.+|..+|++++|+.+|++|++++|....+
T Consensus 85 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 144 (272)
T 3u4t_A 85 MKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKV 144 (272)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHH
T ss_pred HHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHH
Confidence 555555555555555555555555555555555555555555555555555555554443
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.55 E-value=1.7e-14 Score=132.28 Aligned_cols=133 Identities=11% Similarity=0.049 Sum_probs=120.2
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHHH-------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHH---HHH
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQVQ-------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGT---VFV 428 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~~-------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~---~~~ 428 (497)
.+.++..|..+...|++++|+..|++.++ ...+++.+|.+++..|+|++|+..|+++++ .+|+++. +++
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~-~~P~~~~~~~a~~ 82 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIR-LNPTHPNIDYVMY 82 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCTTHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH-HCcCCCcHHHHHH
Confidence 35678889999999999999999999883 257899999999999999999999999999 9999864 899
Q ss_pred HHHHHHHh------------------hhcHHHHHHHHHHHHHhCCCChHHH-----------------HHHHHHHHHCCC
Q 010932 429 RRALSYLM------------------IEQAELALRDAMQAQVCLPEWPTAF-----------------YMQALALNKLGM 473 (497)
Q Consensus 429 ~~g~~~~~------------------~~~~~~A~~~~~~al~l~p~~~~a~-----------------~~~g~~~~~~~~ 473 (497)
.+|.++.. +|++++|+..|+++++.+|+++.++ +.+|.+|...|+
T Consensus 83 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~ 162 (225)
T 2yhc_A 83 MRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGA 162 (225)
T ss_dssp HHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 99999987 5799999999999999999998665 688999999999
Q ss_pred hHHHHHHHHHhhcCccccc
Q 010932 474 ETDAQDMLNDGASFEAKKQ 492 (497)
Q Consensus 474 ~~~A~~~~~~a~~l~~~~~ 492 (497)
+++|+..|+++++..|+.+
T Consensus 163 ~~~A~~~~~~~l~~~p~~~ 181 (225)
T 2yhc_A 163 WVAVVNRVEGMLRDYPDTQ 181 (225)
T ss_dssp HHHHHHHHHHHHHHSTTSH
T ss_pred HHHHHHHHHHHHHHCcCCC
Confidence 9999999999999988764
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.55 E-value=3e-14 Score=133.85 Aligned_cols=135 Identities=13% Similarity=0.111 Sum_probs=121.6
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRAL 432 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~ 432 (497)
.....+...|..+...|++++|+..|++++ .++..+..+|..+...|++++|+..|+++++ ++|+++.+|+++|.
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~-~~~~~~~~~~~la~ 119 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLE-LDPTYNYAHLNRGI 119 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCTHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHh-cCccccHHHHHHHH
Confidence 456788899999999999999999999988 4688999999999999999999999999999 99999999999999
Q ss_pred HHHhhhcHHHHHHHHHHHHHhCCCCh------------------------------------------------------
Q 010932 433 SYLMIEQAELALRDAMQAQVCLPEWP------------------------------------------------------ 458 (497)
Q Consensus 433 ~~~~~~~~~~A~~~~~~al~l~p~~~------------------------------------------------------ 458 (497)
+|..+|++++|+..|+++++++|++.
T Consensus 120 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 199 (275)
T 1xnf_A 120 ALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMER 199 (275)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHH
Confidence 99999999999999999999999875
Q ss_pred ----------------HHHHHHHHHHHHCCChHHHHHHHHHhhcCccccc
Q 010932 459 ----------------TAFYMQALALNKLGMETDAQDMLNDGASFEAKKQ 492 (497)
Q Consensus 459 ----------------~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~ 492 (497)
.+|+.+|.+|..+|++++|+..|++|++++|++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 249 (275)
T 1xnf_A 200 LKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNF 249 (275)
T ss_dssp HHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTC
T ss_pred HHHHhcccccccccccHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCchhH
Confidence 6677788888888888888888888888877653
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.9e-14 Score=130.69 Aligned_cols=130 Identities=14% Similarity=0.051 Sum_probs=69.8
Q ss_pred HHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhc-ccHHHHHHHHHHHhhc-CCCCcHHHHHHHHHH
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRD-KDFKNAIEYYSKLVSM-MSVPSGTVFVRRALS 433 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~-~~~~~Ai~~~~~ai~~-~~p~~~~~~~~~g~~ 433 (497)
..+...|..+...|++++|+..|++++ .+...+...|..++.. |++++|+..|+++++. .+|.+..+|+++|.+
T Consensus 43 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~ 122 (225)
T 2vq2_A 43 LAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGIC 122 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHH
Confidence 344445555555555555555555554 2344555555555555 5555555555555541 123334555555555
Q ss_pred HHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcc
Q 010932 434 YLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEA 489 (497)
Q Consensus 434 ~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~ 489 (497)
+..+|++++|+..|+++++++|+++.+++.+|.++..+|++++|+..|+++++++|
T Consensus 123 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 178 (225)
T 2vq2_A 123 SAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVE 178 (225)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 55555555555555555555555555555555555555555555555555555555
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.4e-14 Score=125.67 Aligned_cols=113 Identities=12% Similarity=0.004 Sum_probs=107.1
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRAL 432 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~ 432 (497)
...+.+...|..+...+++++|+..|++++ .++..++++|.+++..|+|++|+.+|+++++ ++|+++.+|+++|.
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~-~~p~~~~~~~~lg~ 87 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATV-VDPKYSKAWSRLGL 87 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHH-hCCCCHHHHHHHHH
Confidence 556789999999999999999999999999 5789999999999999999999999999999 99999999999999
Q ss_pred HHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Q 010932 433 SYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNK 470 (497)
Q Consensus 433 ~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 470 (497)
+|..+|++++|+..|+++++++|++..+|+++|.+..+
T Consensus 88 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~ 125 (164)
T 3sz7_A 88 ARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTK 125 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999887554
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.6e-14 Score=139.38 Aligned_cols=135 Identities=15% Similarity=0.156 Sum_probs=124.3
Q ss_pred HHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCC---------CCcHHH
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMS---------VPSGTV 426 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~---------p~~~~~ 426 (497)
..+...|..+...|++++|+..|++++ .++..+...|..+...|++++|+..|+++++ +. |..+.+
T Consensus 160 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~~~~ 238 (330)
T 3hym_B 160 LPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALE-KIKAIGNEVTVDKWEPL 238 (330)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHTTTSCSCTTTTCCHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHH-HhhhccccccccHHHHH
Confidence 345567888888999999999999988 5688999999999999999999999999999 65 777899
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 427 FVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 427 ~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
|+++|.++..+|++++|+..|+++++++|+++.+|+.+|.++..+|++++|++.|++|++++|++..+|
T Consensus 239 ~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 307 (330)
T 3hym_B 239 LNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSV 307 (330)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999887765
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.54 E-value=4.6e-15 Score=158.68 Aligned_cols=124 Identities=9% Similarity=-0.073 Sum_probs=118.5
Q ss_pred ccccchhhhhhHHHHHH------------HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhh
Q 010932 370 EEGAENELSFQEWTQQV------------QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMI 437 (497)
Q Consensus 370 ~~~~~~e~a~~~~~~~~------------~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~ 437 (497)
...+++++|++.+++++ +++.+++.+|..++..|+|++|+..|+++++ ++|+++.+|+++|.+|..+
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~-~~p~~~~a~~~lg~~~~~~ 480 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAE-RVGWRWRLVWYRAVAELLT 480 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhc-cCcchHHHHHHHHHHHHHc
Confidence 66888999999999987 3578899999999999999999999999999 9999999999999999999
Q ss_pred hcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 438 EQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 438 ~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
|++++|+..|++|++++|+++.+|+++|.+|..+|++++ +++|++|++++|++..+|
T Consensus 481 g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~ 537 (681)
T 2pzi_A 481 GDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAA 537 (681)
T ss_dssp TCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHH
Confidence 999999999999999999999999999999999999999 999999999999988776
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.1e-14 Score=143.19 Aligned_cols=136 Identities=8% Similarity=0.017 Sum_probs=118.3
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHHH----------HHHhHHhhcccHHHHHHHHHHHhhcCCCC--
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTK----------KFGDIAFRDKDFKNAIEYYSKLVSMMSVP-- 422 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~----------~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~-- 422 (497)
...+..+|..+...|++++|+..|++++ ++...+. ..|..+...|++++|+..|+++++ ++|+
T Consensus 133 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~-~~p~~~ 211 (365)
T 4eqf_A 133 LKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAH-QNGDMI 211 (365)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHH-HSCSSC
T ss_pred HHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHH-hCcCcc
Confidence 4568888999999999999999999988 3333333 449999999999999999999999 9999
Q ss_pred cHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 423 SGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 423 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
++.+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|.+|..+|++++|+..|++|++++|+...+|
T Consensus 212 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 284 (365)
T 4eqf_A 212 DPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSR 284 (365)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999999999877665
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=99.54 E-value=3.6e-14 Score=116.91 Aligned_cols=103 Identities=19% Similarity=0.171 Sum_probs=98.5
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCC-------hH
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEW-------PT 459 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~-------~~ 459 (497)
+.+..++..|..++..|+|++|+..|+++++ .+|+++.+++++|.++..+|++++|+..|+++++++|++ +.
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 80 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKE-LDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh-cCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHH
Confidence 3567899999999999999999999999999 999999999999999999999999999999999999988 99
Q ss_pred HHHHHHHHHHHCCChHHHHHHHHHhhcCccc
Q 010932 460 AFYMQALALNKLGMETDAQDMLNDGASFEAK 490 (497)
Q Consensus 460 a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~ 490 (497)
+++++|.++..+|++++|+++|+++++++|+
T Consensus 81 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999998874
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.53 E-value=2.8e-14 Score=118.22 Aligned_cols=116 Identities=9% Similarity=-0.016 Sum_probs=110.2
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRAL 432 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~ 432 (497)
.....+...|..+...++++.|+..|++++ .++..++.+|..++..|++++|+..|+++++ ++|+++.+|+++|.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~la~ 92 (133)
T 2lni_A 14 DLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQ-LEPTFIKGYTRKAA 92 (133)
T ss_dssp CHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHH-hCCCchHHHHHHHH
Confidence 456788899999999999999999999998 5788999999999999999999999999999 99999999999999
Q ss_pred HHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCC
Q 010932 433 SYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGM 473 (497)
Q Consensus 433 ~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~ 473 (497)
++..+|++++|+..|+++++++|++..+++.+|.++..+|+
T Consensus 93 ~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 93 ALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred HHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999998774
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=1.7e-14 Score=151.19 Aligned_cols=123 Identities=14% Similarity=0.040 Sum_probs=104.0
Q ss_pred ccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHH
Q 010932 372 GAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDA 447 (497)
Q Consensus 372 ~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~ 447 (497)
.|++++|++.|++++ .++..++.+|..++..|+|++|+..|++|++ ++|+++.+|+++|.+|..+|++++|+..|
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~-~~p~~~~~~~~lg~~~~~~g~~~~A~~~~ 80 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLA-LHPGHPEAVARLGRVRWTQQRHAEAAVLL 80 (568)
T ss_dssp -------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHT-TSTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 367889999999988 4688999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 448 MQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 448 ~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
++|++++|+++.+|+++|.+|..+|++++|++.|++|++++|++..+|
T Consensus 81 ~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 128 (568)
T 2vsy_A 81 QQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYIT 128 (568)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999999999999999999999876654
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.3e-14 Score=141.83 Aligned_cols=113 Identities=13% Similarity=0.192 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcH-----------------HHHHHHHHHHHhhhcHHHHHH
Q 010932 383 TQQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSG-----------------TVFVRRALSYLMIEQAELALR 445 (497)
Q Consensus 383 ~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~-----------------~~~~~~g~~~~~~~~~~~A~~ 445 (497)
...++.+..++.+|+.++..|+|++|+..|++|+. +.|++. .+|+|+|.||.++|+|++|+.
T Consensus 173 ~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~-~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~ 251 (338)
T 2if4_A 173 EERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIA-YMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIG 251 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHH-HSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH-HhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 34557888999999999999999999999999999 999877 499999999999999999999
Q ss_pred HHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCCC
Q 010932 446 DAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSWR 496 (497)
Q Consensus 446 ~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~~ 496 (497)
.|++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..+|+
T Consensus 252 ~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~ 302 (338)
T 2if4_A 252 HCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRR 302 (338)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC----------
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHH
Confidence 999999999999999999999999999999999999999999999888764
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=99.52 E-value=7.6e-14 Score=113.83 Aligned_cols=107 Identities=17% Similarity=0.231 Sum_probs=98.8
Q ss_pred HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q 010932 388 DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALA 467 (497)
Q Consensus 388 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 467 (497)
.+..++..|..++..|++++|+..|+++++ .+|++..+++++|.++...|++++|+..|+++++++|+++.+++.+|.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 86 (125)
T 1na0_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALE-LDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNA 86 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-HCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHH
Confidence 356788999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 468 LNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 468 ~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
+..+|++++|+..|+++++++|....+|
T Consensus 87 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 114 (125)
T 1na0_A 87 YYKQGDYDEAIEYYQKALELDPNNAEAK 114 (125)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHhCCCcHHHH
Confidence 9999999999999999999998876543
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.52 E-value=2.1e-14 Score=146.20 Aligned_cols=123 Identities=13% Similarity=0.141 Sum_probs=112.7
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHHH----H---------------HHHHHHHHhHHhhcccHHHHHHHHHHHhh
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQVQ----D---------------MLNTKKFGDIAFRDKDFKNAIEYYSKLVS 417 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~----~---------------~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~ 417 (497)
.....+..+|..+...++++.|+..|+++++ + +..++++|.+++++|+|++|+.+|++||+
T Consensus 266 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 266 EQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 5667889999999999999999999999983 2 68899999999999999999999999999
Q ss_pred cCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHH
Q 010932 418 MMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDM 480 (497)
Q Consensus 418 ~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~ 480 (497)
++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..+++.+|.++..++++++|...
T Consensus 346 -~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 346 -LDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRR 407 (457)
T ss_dssp -HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998754
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.52 E-value=3.2e-14 Score=139.77 Aligned_cols=120 Identities=13% Similarity=0.099 Sum_probs=111.4
Q ss_pred cccchhhhhhHHHHHH----H--HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHH
Q 010932 371 EGAENELSFQEWTQQV----Q--DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELAL 444 (497)
Q Consensus 371 ~~~~~e~a~~~~~~~~----~--~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~ 444 (497)
..|++++|+..|++++ . ++..+..+|..+...|++++|+..|+++++ ++|+++.+|+++|.++..+|++++|+
T Consensus 193 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~-~~~~~~~~~~~l~~~~~~~g~~~~A~ 271 (368)
T 1fch_A 193 SDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALS-VRPNDYLLWNKLGATLANGNQSEEAV 271 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred hcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCcCCHHHHHHHHHHHHHcCCHHHHH
Confidence 4566677777777766 2 578899999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccc
Q 010932 445 RDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKK 491 (497)
Q Consensus 445 ~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~ 491 (497)
..|+++++++|+++.+|+++|.+|..+|++++|+..|++|++++|+.
T Consensus 272 ~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 272 AAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999887
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.52 E-value=8.4e-15 Score=117.61 Aligned_cols=96 Identities=14% Similarity=0.194 Sum_probs=91.3
Q ss_pred HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCC------hHHH
Q 010932 388 DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEW------PTAF 461 (497)
Q Consensus 388 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~------~~a~ 461 (497)
++..++.+|..++..|+|++|+..|+++++ ++|+++.+|+++|.++..+|++++|+..|+++++++|++ ..++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~-~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 81 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLIT-AQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQ 81 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-cCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHH
Confidence 567899999999999999999999999999 999999999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHCCChHHHHHHHHHh
Q 010932 462 YMQALALNKLGMETDAQDMLNDG 484 (497)
Q Consensus 462 ~~~g~~~~~~~~~~~A~~~~~~a 484 (497)
+++|.++..+|++++|++.|++.
T Consensus 82 ~~~~~~~~~~~~~~~a~~~~~~~ 104 (111)
T 2l6j_A 82 YRLELAQGAVGSVQIPVVEVDEL 104 (111)
T ss_dssp HHHHHHHHHHHCCCCCSSSSSSC
T ss_pred HHHHHHHHHHHhHhhhHhHHHHh
Confidence 99999999999999988777653
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=2.1e-14 Score=122.51 Aligned_cols=111 Identities=14% Similarity=0.049 Sum_probs=101.3
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRAL 432 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~ 432 (497)
...+.++..|..+...|++++|+..|++++ .++..++.+|.++...|+|++|+..|++|+. ++|+++.+|+++|.
T Consensus 19 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~-l~p~~~~~~~~lg~ 97 (148)
T 2vgx_A 19 DTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAV-MDIXEPRFPFHAAE 97 (148)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HSTTCTHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-cCCCCchHHHHHHH
Confidence 456788899999999999999999999988 6789999999999999999999999999999 99999999999999
Q ss_pred HHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Q 010932 433 SYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALAL 468 (497)
Q Consensus 433 ~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 468 (497)
+|..+|++++|+..|+++++++|+++.....+..+.
T Consensus 98 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 133 (148)
T 2vgx_A 98 CLLQXGELAEAESGLFLAQELIANXPEFXELSTRVS 133 (148)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHHH
Confidence 999999999999999999999999876644444433
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.52 E-value=3.9e-14 Score=135.35 Aligned_cols=138 Identities=9% Similarity=-0.086 Sum_probs=123.2
Q ss_pred hhHHHHHHHHhccccccccchhhhhhHHHHHHH----------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc-
Q 010932 355 LTAVHDILLKTGYKDEEGAENELSFQEWTQQVQ----------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS- 423 (497)
Q Consensus 355 ~~~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~----------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~- 423 (497)
..+..+.+...|..+...|++++|+..|.++++ .+..+.+.|.++...|++++|+.+|++|++ +.|..
T Consensus 33 ~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~-l~~~~g 111 (292)
T 1qqe_A 33 FEEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQ-IFTHRG 111 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HHHHcC
Confidence 345566777788888899999999999999883 277899999999999999999999999999 76653
Q ss_pred -----HHHHHHHHHHHHhh-hcHHHHHHHHHHHHHhCCCC------hHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccc
Q 010932 424 -----GTVFVRRALSYLMI-EQAELALRDAMQAQVCLPEW------PTAFYMQALALNKLGMETDAQDMLNDGASFEAKK 491 (497)
Q Consensus 424 -----~~~~~~~g~~~~~~-~~~~~A~~~~~~al~l~p~~------~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~ 491 (497)
+.+|.++|.+|..+ |++++|+..|++|+++.|+. ..++.++|.+|..+|+|++|+.+|++++++.|+.
T Consensus 112 ~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 191 (292)
T 1qqe_A 112 QFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGN 191 (292)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSC
T ss_pred CHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcC
Confidence 56899999999995 99999999999999998865 5789999999999999999999999999999886
Q ss_pred cc
Q 010932 492 QN 493 (497)
Q Consensus 492 ~~ 493 (497)
..
T Consensus 192 ~~ 193 (292)
T 1qqe_A 192 RL 193 (292)
T ss_dssp TT
T ss_pred Cc
Confidence 54
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.51 E-value=2e-14 Score=134.95 Aligned_cols=132 Identities=12% Similarity=0.036 Sum_probs=87.3
Q ss_pred HHHhccccccccchhhhhhHHHHHHH-------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 362 LLKTGYKDEEGAENELSFQEWTQQVQ-------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 362 ~~~~g~~~~~~~~~e~a~~~~~~~~~-------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
+..+|..+...|++++|+..|+++++ .+..++.+|..+...|++++|+..|+++++ ++|+++.+|.++|.+|
T Consensus 40 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~l~~~~ 118 (272)
T 3u4t_A 40 YNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVD-RDTTRLDMYGQIGSYF 118 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HSTTCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHh-cCcccHHHHHHHHHHH
Confidence 44555566666667777777776663 133466677777777777777777777777 7777777777777777
Q ss_pred HhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccC
Q 010932 435 LMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
..+|++++|+..|+++++++|+++.+|+++|...+..+++++|++.|+++++++|+...+
T Consensus 119 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 178 (272)
T 3u4t_A 119 YNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNKEYVKADSSFVKVLELKPNIYIG 178 (272)
T ss_dssp HHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccchHH
Confidence 777777777777777777777777777777733333447777777777777766665443
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.51 E-value=7.2e-14 Score=133.46 Aligned_cols=134 Identities=10% Similarity=0.029 Sum_probs=115.8
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHHHHH--HHHHHHH----hHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQVQDM--LNTKKFG----DIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRAL 432 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~~~~--~~~~~~g----~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~ 432 (497)
.+.+...|..+...|+.++|++.|+++++.. ....+.+ ..+...|++++|+..|+++++ ..|+++.+|+++|.
T Consensus 130 ~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~-~~p~~~~~~~~la~ 208 (291)
T 3mkr_A 130 LECMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAA 208 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHH-HSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH-hCCCcHHHHHHHHH
Confidence 4567778888999999999999999988221 1122322 333456999999999999999 99999999999999
Q ss_pred HHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHH-HHHHHHHhhcCcccccc
Q 010932 433 SYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETD-AQDMLNDGASFEAKKQN 493 (497)
Q Consensus 433 ~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~-A~~~~~~a~~l~~~~~~ 493 (497)
++.++|++++|+..|++|++++|+++++++++|.++..+|++++ |.++++++++++|+++.
T Consensus 209 ~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~ 270 (291)
T 3mkr_A 209 CHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHPF 270 (291)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCChH
Confidence 99999999999999999999999999999999999999999987 56889999999999764
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.51 E-value=1.6e-13 Score=125.63 Aligned_cols=135 Identities=14% Similarity=0.017 Sum_probs=121.4
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHHH-------HHHHHHHHHhHHhh------------------cccHHHHHHHHH
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQVQ-------DMLNTKKFGDIAFR------------------DKDFKNAIEYYS 413 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~~-------~~~~~~~~g~~~~~------------------~~~~~~Ai~~~~ 413 (497)
.+.++.+|..+...|+++.|+..|++.++ ...+++.+|.+++. .|++++|+..|+
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 120 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFS 120 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHH
Confidence 46788899999999999999999999882 23578999998876 689999999999
Q ss_pred HHhhcCCCCcHHHH-----------------HHHHHHHHhhhcHHHHHHHHHHHHHhCCCCh---HHHHHHHHHHHHCCC
Q 010932 414 KLVSMMSVPSGTVF-----------------VRRALSYLMIEQAELALRDAMQAQVCLPEWP---TAFYMQALALNKLGM 473 (497)
Q Consensus 414 ~ai~~~~p~~~~~~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~---~a~~~~g~~~~~~~~ 473 (497)
++|+ ..|++..++ +.+|.+|++.|++++|+..|+++++..|+++ ++++.+|.+|.++|+
T Consensus 121 ~~l~-~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~ 199 (225)
T 2yhc_A 121 KLVR-GYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQM 199 (225)
T ss_dssp HHHT-TCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTC
T ss_pred HHHH-HCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCC
Confidence 9999 999987655 6889999999999999999999999999986 789999999999999
Q ss_pred hHHHHHHHHHhhcCccccccC
Q 010932 474 ETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 474 ~~~A~~~~~~a~~l~~~~~~~ 494 (497)
+++|++.|+++....|+...-
T Consensus 200 ~~~A~~~~~~l~~~~~~~~~~ 220 (225)
T 2yhc_A 200 NAQAEKVAKIIAANSSNTLEH 220 (225)
T ss_dssp HHHHHHHHHHHHHCCSCCCCC
T ss_pred cHHHHHHHHHHHhhCCCchhh
Confidence 999999999999888876543
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.51 E-value=3.5e-14 Score=127.24 Aligned_cols=129 Identities=12% Similarity=0.072 Sum_probs=113.3
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHHH----H----------------HHHHHHHHhHHhhcccHHHHHHHHHHHh
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQVQ----D----------------MLNTKKFGDIAFRDKDFKNAIEYYSKLV 416 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~----~----------------~~~~~~~g~~~~~~~~~~~Ai~~~~~ai 416 (497)
.....+...|..+...+++++|+..|+++++ + ...++++|.+++..|+|++|+.+|++++
T Consensus 36 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al 115 (198)
T 2fbn_A 36 QSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVL 115 (198)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 4667889999999999999999999999984 2 3889999999999999999999999999
Q ss_pred hcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHH-HHHHHhhc
Q 010932 417 SMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQ-DMLNDGAS 486 (497)
Q Consensus 417 ~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~-~~~~~a~~ 486 (497)
+ ++|+++.+|+++|.+|..+|++++|+..|+++++++|++..++..++.++..+++++++. ..|++.+.
T Consensus 116 ~-~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~ 185 (198)
T 2fbn_A 116 K-IDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARKKDKLTFGGMFD 185 (198)
T ss_dssp H-HSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC-----------
T ss_pred H-hCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9 999999999999999999999999999999999999999999999999999999999988 44555443
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.6e-14 Score=126.90 Aligned_cols=131 Identities=15% Similarity=0.020 Sum_probs=109.4
Q ss_pred HHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHH-HH
Q 010932 361 ILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALS-YL 435 (497)
Q Consensus 361 ~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~-~~ 435 (497)
.+...|..+...|++++|+..|++++ +++.+++.+|.++...|++++|+..|++++. .+| ++..+..++.+ +.
T Consensus 8 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~-~~p-~~~~~~~~~~~~~~ 85 (176)
T 2r5s_A 8 QLLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPL-EYQ-DNSYKSLIAKLELH 85 (176)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCG-GGC-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhh-ccC-ChHHHHHHHHHHHH
Confidence 35566777788899999999999877 5678899999999999999999999999999 888 77777666644 33
Q ss_pred hhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccccc
Q 010932 436 MIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQN 493 (497)
Q Consensus 436 ~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~ 493 (497)
..++..+|+..++++++++|+++.+++++|.++..+|++++|+..|+++++++|...+
T Consensus 86 ~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~ 143 (176)
T 2r5s_A 86 QQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQD 143 (176)
T ss_dssp HHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTT
T ss_pred hhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccCh
Confidence 3345556899999999999999999999999999999999999999999999987533
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.51 E-value=6.1e-14 Score=135.22 Aligned_cols=130 Identities=15% Similarity=0.027 Sum_probs=122.5
Q ss_pred HHHHHhcccccccc-chhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 360 DILLKTGYKDEEGA-ENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 360 ~~~~~~g~~~~~~~-~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
..+...|..+...| .+++|++.|++++ .++..+..+|..+...|++++|+..|+++++ +.|++..+++++|.++
T Consensus 91 ~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~l~~~~ 169 (330)
T 3hym_B 91 VSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQ-LMKGCHLPMLYIGLEY 169 (330)
T ss_dssp HHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HTTTCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHH-hccccHHHHHHHHHHH
Confidence 46777888888889 8999999999998 5678899999999999999999999999999 9999999999999999
Q ss_pred HhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccc
Q 010932 435 LMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAK 490 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~ 490 (497)
..+|++++|+..|+++++++|+++.+++.+|.++..+|++++|+..|++++++.++
T Consensus 170 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 225 (330)
T 3hym_B 170 GLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKA 225 (330)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999998643
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=2.2e-14 Score=136.71 Aligned_cols=132 Identities=9% Similarity=-0.006 Sum_probs=123.0
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
.+.+..+|..+...|++++|+..|++++ +++.+++.+|.++...|++++|+..|++++. .+|+....+.+.+..+
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~-~~p~~~~~~~~~~~~l 195 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPL-QDQDTRYQGLVAQIEL 195 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCG-GGCSHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCch-hhcchHHHHHHHHHHH
Confidence 3567788888999999999999999988 5788999999999999999999999999999 9998888888889999
Q ss_pred HhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccc
Q 010932 435 LMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKK 491 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~ 491 (497)
...++.++|+..|+++++++|+++.+++++|.+|...|++++|+..|+++++++|+.
T Consensus 196 ~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 196 LXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred HhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc
Confidence 999999999999999999999999999999999999999999999999999999987
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.50 E-value=9.3e-14 Score=114.30 Aligned_cols=119 Identities=12% Similarity=0.044 Sum_probs=112.1
Q ss_pred hHHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHH
Q 010932 356 TAVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRA 431 (497)
Q Consensus 356 ~~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g 431 (497)
+.....+...|..+...++++.|+..|++++ .++..++.+|..++..|++++|+..|.++++ ++|+++.+|+++|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~~~ 87 (131)
T 2vyi_A 9 SAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAIC-IDPAYSKAYGRMG 87 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHh-cCccCHHHHHHHH
Confidence 3456788889999999999999999999988 4678999999999999999999999999999 9999999999999
Q ss_pred HHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChH
Q 010932 432 LSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMET 475 (497)
Q Consensus 432 ~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~ 475 (497)
.++..+|++++|+..|+++++++|++..+++.+|.++..+|+++
T Consensus 88 ~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~ 131 (131)
T 2vyi_A 88 LALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREAP 131 (131)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999863
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.50 E-value=3.4e-14 Score=120.18 Aligned_cols=117 Identities=14% Similarity=0.033 Sum_probs=105.8
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRAL 432 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~ 432 (497)
...+.++..|..+...|++++|+..|++++ .++..++.+|.++...|+|++|+..|++++. ++|+++.+|+++|.
T Consensus 16 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~-~~p~~~~~~~~lg~ 94 (142)
T 2xcb_A 16 DTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGAL-MDINEPRFPFHAAE 94 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-cCCCCcHHHHHHHH
Confidence 455778889999999999999999999988 6789999999999999999999999999999 99999999999999
Q ss_pred HHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCCh
Q 010932 433 SYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGME 474 (497)
Q Consensus 433 ~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~ 474 (497)
+|..+|++++|+..|+++++++|+++..+..+..+...++..
T Consensus 95 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~l 136 (142)
T 2xcb_A 95 CHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLEAV 136 (142)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHH
Confidence 999999999999999999999999987776666665554433
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.50 E-value=1.1e-14 Score=148.90 Aligned_cols=108 Identities=22% Similarity=0.291 Sum_probs=103.6
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQAL 466 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 466 (497)
+.+..++.+|..++..|+|++|+..|++|++ ++|+++.+|+++|.+|.++|+|++|+..|++|++++|+++.+|+++|.
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~-~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~ 82 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIE-LNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAA 82 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-hCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 4567788899999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 467 ALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 467 ~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
+|..+|++++|+++|++|++++|++..+|
T Consensus 83 ~~~~~g~~~eA~~~~~~al~~~p~~~~~~ 111 (477)
T 1wao_1 83 SNMALGKFRAALRDYETVVKVKPHDKDAK 111 (477)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSTTCTTHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999887765
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.49 E-value=9.7e-14 Score=128.78 Aligned_cols=135 Identities=12% Similarity=-0.044 Sum_probs=125.9
Q ss_pred HHHHHhccccccccchhhhhhHHHHHHH------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHH
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQVQ------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALS 433 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~ 433 (497)
..+...|..+...|++++|+..|+++++ ++..++..|..++..|++++|+..|+++++ .+|.++.+++.+|.+
T Consensus 106 ~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~-~~~~~~~~~~~la~~ 184 (252)
T 2ho1_A 106 RVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLR-LNRNQPSVALEMADL 184 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-cCcccHHHHHHHHHH
Confidence 4567778888889999999999999874 788899999999999999999999999999 999999999999999
Q ss_pred HHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 434 YLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 434 ~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
+..+|++++|+..++++++++|++..+++.++.++..+|++++|...++++++++|++..++
T Consensus 185 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~ 246 (252)
T 2ho1_A 185 LYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFEDRDTAASYGLQLKRLYPGSLEYQ 246 (252)
T ss_dssp HHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999876543
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.1e-13 Score=131.99 Aligned_cols=143 Identities=6% Similarity=-0.022 Sum_probs=126.1
Q ss_pred cchhHHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcc--cHHHHHHHHHHHhhcCCCCcHHH
Q 010932 353 MDLTAVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDK--DFKNAIEYYSKLVSMMSVPSGTV 426 (497)
Q Consensus 353 ~~~~~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~--~~~~Ai~~~~~ai~~~~p~~~~~ 426 (497)
...+++.+.+...........-.++|++.+++++ ++..+|+.+|.++..+| ++++|+..++++|. .+|+++.+
T Consensus 27 ~y~~~y~~~~~~~~a~~~~~e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~-~nPk~y~a 105 (306)
T 3dra_A 27 LYDEDYKQIMGLLLALMKAEEYSERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIAL-DNEKNYQI 105 (306)
T ss_dssp CCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHH-HCTTCCHH
T ss_pred eeCHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHH-HCcccHHH
Confidence 3444555555443333334445579999999988 78899999999999999 99999999999999 99999999
Q ss_pred HHHHHHHH----Hhh---hcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChH--HHHHHHHHhhcCccccccCCC
Q 010932 427 FVRRALSY----LMI---EQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMET--DAQDMLNDGASFEAKKQNSWR 496 (497)
Q Consensus 427 ~~~~g~~~----~~~---~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~--~A~~~~~~a~~l~~~~~~~~~ 496 (497)
|+.|+.++ ..+ +++++++..++++++++|++..+|++++.++..+|.++ +++++++++++++|++-.+|+
T Consensus 106 W~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~ 184 (306)
T 3dra_A 106 WNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWS 184 (306)
T ss_dssp HHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHH
Confidence 99999999 777 78999999999999999999999999999999999999 999999999999999999996
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.49 E-value=1.6e-13 Score=135.51 Aligned_cols=123 Identities=15% Similarity=0.195 Sum_probs=115.7
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHHH--------------------HHHHHHHHHhHHhhcccHHHHHHHHHHHh
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQVQ--------------------DMLNTKKFGDIAFRDKDFKNAIEYYSKLV 416 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~--------------------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai 416 (497)
.....+...|..+...+++++|+..|+++++ ++..++++|.+++++|+|++|+.+|++|+
T Consensus 221 ~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al 300 (370)
T 1ihg_A 221 LISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEAL 300 (370)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 4567788999999999999999999999885 46788999999999999999999999999
Q ss_pred hcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHH
Q 010932 417 SMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDM 480 (497)
Q Consensus 417 ~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~ 480 (497)
+ ++|+++.+|+++|.+|..+|++++|+.+|++|++++|++..++..++.++..++++++|...
T Consensus 301 ~-~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 301 E-IDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp T-TCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred H-hCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9 99999999999999999999999999999999999999999999999999999999988654
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.2e-13 Score=125.36 Aligned_cols=136 Identities=11% Similarity=-0.019 Sum_probs=121.3
Q ss_pred HHHHHHHhccccccc-cchhhhhhHHHHHHH------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHH
Q 010932 358 VHDILLKTGYKDEEG-AENELSFQEWTQQVQ------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRR 430 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~-~~~e~a~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~ 430 (497)
....+...|..+... |++++|+..|+++++ +...++..|..+...|++++|+..|+++++ .+|+++.+++++
T Consensus 75 ~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~l 153 (225)
T 2vq2_A 75 SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLA-AQPQFPPAFKEL 153 (225)
T ss_dssp CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HSTTCHHHHHHH
T ss_pred ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCCCchHHHHH
Confidence 345667788888889 999999999999874 367888999999999999999999999999 999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHHHHhCC-CChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccC
Q 010932 431 ALSYLMIEQAELALRDAMQAQVCLP-EWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 431 g~~~~~~~~~~~A~~~~~~al~l~p-~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
|.++..+|++++|+..++++++++| ++..+++.++.++...|++++|...++.+.+++|++..+
T Consensus 154 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~p~~~~~ 218 (225)
T 2vq2_A 154 ARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQANFPYSEEL 218 (225)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCHHH
Confidence 9999999999999999999999999 999999999999999999999999999998888887654
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.48 E-value=7.4e-14 Score=136.06 Aligned_cols=136 Identities=14% Similarity=0.023 Sum_probs=126.8
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
.+.+...|..+...|++++|+..|++++ .++..++.+|..++..|++++|+..|+++++ ++|++..+|+.+|.++
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~l~~~~ 81 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIA-LKMDFTAARLQRGHLL 81 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHH-hCCCcchHHHHHHHHH
Confidence 4678889999999999999999999988 5688999999999999999999999999999 9999999999999999
Q ss_pred HhhhcHHHHHHHHHHHHHhCC---CChHHHHHH------------HHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 435 LMIEQAELALRDAMQAQVCLP---EWPTAFYMQ------------ALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p---~~~~a~~~~------------g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
..+|++++|+..|+++++++| ++..+++.+ |.++...|++++|++.|+++++++|....+|
T Consensus 82 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 157 (359)
T 3ieg_A 82 LKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELR 157 (359)
T ss_dssp HHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHH
Confidence 999999999999999999999 999999888 7899999999999999999999998876554
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.47 E-value=1.9e-13 Score=134.25 Aligned_cols=135 Identities=10% Similarity=0.012 Sum_probs=103.5
Q ss_pred HHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHH--------------------
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKL-------------------- 415 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~a-------------------- 415 (497)
..+..+|..+...|++++|+..|++++ .++..+..+|..+...|++++|+..|+++
T Consensus 99 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (368)
T 1fch_A 99 EAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGG 178 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC--------
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhh
Confidence 345556666666666666666666665 34556666666666666555555555554
Q ss_pred -----------------------------hhcCCCC--cHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHH
Q 010932 416 -----------------------------VSMMSVP--SGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQ 464 (497)
Q Consensus 416 -----------------------------i~~~~p~--~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 464 (497)
++ ++|+ ++.+|+++|.++..+|++++|+..|+++++++|+++.+|+++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~-~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l 257 (368)
T 1fch_A 179 AGLGPSKRILGSLLSDSLFLEVKELFLAAVR-LDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKL 257 (368)
T ss_dssp -------CTTHHHHHHHHHHHHHHHHHHHHH-HSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hcccHHHHHHHHHhhcccHHHHHHHHHHHHH-hCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHH
Confidence 44 5555 678899999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 465 ALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 465 g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
|.++..+|++++|+..|+++++++|....+|
T Consensus 258 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 288 (368)
T 1fch_A 258 GATLANGNQSEEAVAAYRRALELQPGYIRSR 288 (368)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCcHHHH
Confidence 9999999999999999999999988776554
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.47 E-value=2.4e-13 Score=140.71 Aligned_cols=137 Identities=14% Similarity=0.071 Sum_probs=130.1
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
...+...|..+...|+++.|+..|++++ +++..+..+|..+...|++++|+..|+++++ ++|+++.+|+++|.++
T Consensus 276 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~la~~~ 354 (537)
T 3fp2_A 276 PNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQS-LNPENVYPYIQLACLL 354 (537)
T ss_dssp HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCSHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHH-hCCCCHHHHHHHHHHH
Confidence 4567888999999999999999999988 5688999999999999999999999999999 9999999999999999
Q ss_pred HhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCCC
Q 010932 435 LMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSWR 496 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~~ 496 (497)
..+|++++|+..|+++++++|+++.+++.+|.++..+|++++|+..|++|++++|+....|.
T Consensus 355 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 416 (537)
T 3fp2_A 355 YKQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHV 416 (537)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCSSCSS
T ss_pred HHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcchhhHH
Confidence 99999999999999999999999999999999999999999999999999999998877764
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.1e-13 Score=132.24 Aligned_cols=135 Identities=10% Similarity=-0.071 Sum_probs=119.4
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHH--HHHHh
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRA--LSYLM 436 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g--~~~~~ 436 (497)
...+...|..+...|++++|++.+++ -.+...+..+|.++.+.|++++|+..|+++++ .+|++.......+ ..+..
T Consensus 101 ~~~~~~la~~~~~~g~~~~Al~~l~~-~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~-~~p~~~~~~l~~a~~~l~~~ 178 (291)
T 3mkr_A 101 TTFLLMAASIYFYDQNPDAALRTLHQ-GDSLECMAMTVQILLKLDRLDLARKELKKMQD-QDEDATLTQLATAWVSLAAG 178 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTT-CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHhC-CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHh-hCcCcHHHHHHHHHHHHHhC
Confidence 34578888999999999999999988 46788999999999999999999999999999 9999764443333 22334
Q ss_pred hhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 437 IEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 437 ~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
.|++++|+..|+++++.+|+++.+|+++|.++..+|++++|++.|++|++++|+++.+|
T Consensus 179 ~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l 237 (291)
T 3mkr_A 179 GEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETL 237 (291)
T ss_dssp TTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred chHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 59999999999999999999999999999999999999999999999999999998876
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.9e-13 Score=131.53 Aligned_cols=122 Identities=11% Similarity=0.049 Sum_probs=117.6
Q ss_pred ccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHH
Q 010932 368 KDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELA 443 (497)
Q Consensus 368 ~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A 443 (497)
.+...+++++|+..+++++ .++..+..+|..+...|++++|+..|+++++ .+|+++.+|.++|.++..+|++++|
T Consensus 147 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~A 225 (327)
T 3cv0_A 147 FFAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVE-LRPDDAQLWNKLGATLANGNRPQEA 225 (327)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHH-hCCCcHHHHHHHHHHHHHcCCHHHH
Confidence 5788899999999999988 4688999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccc
Q 010932 444 LRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAK 490 (497)
Q Consensus 444 ~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~ 490 (497)
+..|+++++++|+++.+|+.+|.++..+|++++|++.|+++++++|+
T Consensus 226 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 226 LDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc
Confidence 99999999999999999999999999999999999999999999988
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.46 E-value=2.6e-13 Score=137.17 Aligned_cols=136 Identities=15% Similarity=0.068 Sum_probs=122.5
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHH------------HHHHhHHhhcccHHHHHHHHHHHhhcCCCC
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNT------------KKFGDIAFRDKDFKNAIEYYSKLVSMMSVP 422 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~------------~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~ 422 (497)
...+...|..+...|++++|+..|++++ .+...+ ...|..++..|++++|+..|+++++ ++|+
T Consensus 211 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~-~~p~ 289 (450)
T 2y4t_A 211 TEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMK-TEPS 289 (450)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HCCS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-cCCc
Confidence 4667888889999999999999999987 223333 3449999999999999999999999 9999
Q ss_pred cH----HHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 423 SG----TVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 423 ~~----~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
++ .+|.++|.++.++|++++|+..|+++++++|+++.+|+.+|.++..+|++++|+.+|++|++++|++..+|
T Consensus 290 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 366 (450)
T 2y4t_A 290 IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIR 366 (450)
T ss_dssp SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHH
T ss_pred chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcchHHHH
Confidence 85 48999999999999999999999999999999999999999999999999999999999999999987654
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.46 E-value=2.2e-13 Score=132.69 Aligned_cols=97 Identities=18% Similarity=0.213 Sum_probs=50.1
Q ss_pred HhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChH
Q 010932 396 GDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMET 475 (497)
Q Consensus 396 g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~ 475 (497)
|..++..|++++|+..|+++++ .+|+++.++.++|.++..+|++++|+..++++++++|+++.+++.+|.++..+|+++
T Consensus 127 a~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 205 (359)
T 3ieg_A 127 ALDAFDGADYTAAITFLDKILE-VCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKSDNTEAFYKISTLYYQLGDHE 205 (359)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHccCHHHHHHHHHHHHH-hCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH
Confidence 3444455555555555555555 455555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHHhhcCcccccc
Q 010932 476 DAQDMLNDGASFEAKKQN 493 (497)
Q Consensus 476 ~A~~~~~~a~~l~~~~~~ 493 (497)
+|+..|+++++++|+...
T Consensus 206 ~A~~~~~~a~~~~~~~~~ 223 (359)
T 3ieg_A 206 LSLSEVRECLKLDQDHKR 223 (359)
T ss_dssp HHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHhhCccchH
Confidence 555555555555544433
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.46 E-value=2.8e-13 Score=130.37 Aligned_cols=135 Identities=10% Similarity=0.017 Sum_probs=120.0
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHHH----------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc---
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQVQ----------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS--- 423 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~----------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~--- 423 (497)
.....+.+.|..+...|++++|+..|+++++ .+..+.+.|.++.. |+|++|+.+|++|++ +.|..
T Consensus 74 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~-~~~~~~~~ 151 (307)
T 2ifu_A 74 HAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAA-VFENEERL 151 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHH-HHHHTTCH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHH-HHHhCCCh
Confidence 4567788899999999999999999999882 36788899999999 999999999999999 76543
Q ss_pred ---HHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCC------hHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccC
Q 010932 424 ---GTVFVRRALSYLMIEQAELALRDAMQAQVCLPEW------PTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 424 ---~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~------~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
..++.++|.+|..+|+|++|+..|++++++.|++ ..+++++|.++..+|++++|+.+|++++ ++|....+
T Consensus 152 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~~ 230 (307)
T 2ifu_A 152 RQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSGS 230 (307)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTTS
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCCC
Confidence 6789999999999999999999999999997765 3589999999999999999999999999 99876543
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.44 E-value=2.5e-13 Score=112.54 Aligned_cols=100 Identities=11% Similarity=0.152 Sum_probs=93.0
Q ss_pred hHHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc-------H
Q 010932 356 TAVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS-------G 424 (497)
Q Consensus 356 ~~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~-------~ 424 (497)
......+.++|..++..|++++|+..|++++ +++..+.++|.+++.+|+|++|+..|++||+ ++|++ +
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~-~~~~~~~~~~~~a 83 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVE-VGRETRADYKLIA 83 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHH-hCcccchhhHHHH
Confidence 4566788899999999999999999999999 6789999999999999999999999999999 88876 3
Q ss_pred HHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCC
Q 010932 425 TVFVRRALSYLMIEQAELALRDAMQAQVCLPE 456 (497)
Q Consensus 425 ~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 456 (497)
.+|+++|.++..+|++++|+..|++++++.|+
T Consensus 84 ~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 84 KAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC
Confidence 68999999999999999999999999999986
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=8e-14 Score=145.14 Aligned_cols=138 Identities=6% Similarity=-0.045 Sum_probs=126.2
Q ss_pred HHHHHHHhccccccccc----------hhhhhhHHHHHH----HHHHHHHHHHhHHhhcc--cHHHHHHHHHHHhhcCCC
Q 010932 358 VHDILLKTGYKDEEGAE----------NELSFQEWTQQV----QDMLNTKKFGDIAFRDK--DFKNAIEYYSKLVSMMSV 421 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~----------~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~--~~~~Ai~~~~~ai~~~~p 421 (497)
...+|..+|......+. ++++++.+++++ ++..+|+.++.++.+.+ +|++|+++++++++ ++|
T Consensus 62 ~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~-~d~ 140 (567)
T 1dce_A 62 FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLE-ADE 140 (567)
T ss_dssp CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHH-HCT
T ss_pred hHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHh-hcc
Confidence 34556666666666555 889999999988 78999999999999999 77999999999999 999
Q ss_pred CcHHHHHHHHHHHHhhh-cHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHC--------------CChHHHHHHHHHhhc
Q 010932 422 PSGTVFVRRALSYLMIE-QAELALRDAMQAQVCLPEWPTAFYMQALALNKL--------------GMETDAQDMLNDGAS 486 (497)
Q Consensus 422 ~~~~~~~~~g~~~~~~~-~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~--------------~~~~~A~~~~~~a~~ 486 (497)
.|..||.+|+.++..+| .+++|++.++++|+++|++..||+++|.++..+ +.+++|++++++|+.
T Consensus 141 ~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~ 220 (567)
T 1dce_A 141 RNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFF 220 (567)
T ss_dssp TCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHh
Confidence 99999999999999999 999999999999999999999999999999986 668999999999999
Q ss_pred CccccccCCC
Q 010932 487 FEAKKQNSWR 496 (497)
Q Consensus 487 l~~~~~~~~~ 496 (497)
++|+++.+|.
T Consensus 221 ~~P~~~saW~ 230 (567)
T 1dce_A 221 TDPNDQSAWF 230 (567)
T ss_dssp HCSSCSHHHH
T ss_pred hCCCCccHHH
Confidence 9999999984
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.8e-13 Score=111.03 Aligned_cols=87 Identities=15% Similarity=0.131 Sum_probs=82.3
Q ss_pred HHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhh
Q 010932 406 KNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGA 485 (497)
Q Consensus 406 ~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~ 485 (497)
++|+..|+++++ .+|+++.+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|.+|..+|++++|+..|++|+
T Consensus 2 ~~a~~~~~~al~-~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 2 QAITERLEAMLA-QGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp CCHHHHHHHHHT-TTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH-hCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 368999999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccccc
Q 010932 486 SFEAKKQN 493 (497)
Q Consensus 486 ~l~~~~~~ 493 (497)
+++|...+
T Consensus 81 ~~~~~~~~ 88 (115)
T 2kat_A 81 AAAQSRGD 88 (115)
T ss_dssp HHHHHHTC
T ss_pred Hhcccccc
Confidence 99887543
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.44 E-value=3e-13 Score=114.33 Aligned_cols=87 Identities=16% Similarity=0.085 Sum_probs=80.3
Q ss_pred ccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccH----------HHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhh
Q 010932 372 GAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDF----------KNAIEYYSKLVSMMSVPSGTVFVRRALSYLMI 437 (497)
Q Consensus 372 ~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~----------~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~ 437 (497)
.+.+++|++.+++++ +++++|++.|.++...+++ ++|+..|++||+ ++|+++.+|+++|.+|..+
T Consensus 15 ~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~-ldP~~~~A~~~LG~ay~~l 93 (158)
T 1zu2_A 15 ILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALL-IDPKKDEAVWCIGNAYTSF 93 (158)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHH-hCcCcHHHHHHHHHHHHHh
Confidence 356789999999988 7899999999999999876 599999999999 9999999999999999998
Q ss_pred h-----------cHHHHHHHHHHHHHhCCCChH
Q 010932 438 E-----------QAELALRDAMQAQVCLPEWPT 459 (497)
Q Consensus 438 ~-----------~~~~A~~~~~~al~l~p~~~~ 459 (497)
| ++++|+..|++|++++|++..
T Consensus 94 g~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~ 126 (158)
T 1zu2_A 94 AFLTPDETEAKHNFDLATQFFQQAVDEQPDNTH 126 (158)
T ss_dssp HHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred cccCcchhhhhccHHHHHHHHHHHHHhCCCCHH
Confidence 5 899999999999999999853
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.44 E-value=2.7e-13 Score=137.01 Aligned_cols=138 Identities=14% Similarity=0.030 Sum_probs=127.5
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRAL 432 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~ 432 (497)
.....+...|..+...|++++|+..|++++ .++..++.+|..++..|++++|+..|+++++ ++|+++.+|+++|.
T Consensus 24 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~-~~p~~~~~~~~l~~ 102 (450)
T 2y4t_A 24 ADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQ-LKMDFTAARLQRGH 102 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHh-cCCCcHHHHHHHHH
Confidence 456788899999999999999999999988 4688999999999999999999999999999 99999999999999
Q ss_pred HHHhhhcHHHHHHHHHHHHHhCCCCh---HHHHHH------------HHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 433 SYLMIEQAELALRDAMQAQVCLPEWP---TAFYMQ------------ALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 433 ~~~~~~~~~~A~~~~~~al~l~p~~~---~a~~~~------------g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
+|..+|++++|+..|+++++++|++. .++..+ |.++...|++++|+..|+++++++|.+..+|
T Consensus 103 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 180 (450)
T 2y4t_A 103 LLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELR 180 (450)
T ss_dssp HHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 99999999999999999999999998 776655 7779999999999999999999988876554
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.43 E-value=1.8e-13 Score=112.32 Aligned_cols=97 Identities=12% Similarity=-0.006 Sum_probs=86.3
Q ss_pred HHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhh
Q 010932 362 LLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMI 437 (497)
Q Consensus 362 ~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~ 437 (497)
++..|..+...|++++|+..|++++ +++.+++.+|.++...|++++|+..|++|++ ++|+++.+|+++|.+|..+
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~-l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARM-LDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHc
Confidence 5677888888999999999999998 6899999999999999999999999999999 9999999999999999999
Q ss_pred hcHHHHHHHHHHHHHhCCCChH
Q 010932 438 EQAELALRDAMQAQVCLPEWPT 459 (497)
Q Consensus 438 ~~~~~A~~~~~~al~l~p~~~~ 459 (497)
|++++|+..|+++++++|++..
T Consensus 99 g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 99 HNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHC-------
T ss_pred CCHHHHHHHHHHHHHhCcCCCC
Confidence 9999999999999999999864
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=5.2e-13 Score=139.00 Aligned_cols=124 Identities=7% Similarity=-0.008 Sum_probs=117.6
Q ss_pred ccc-hhhhhhHHHHHH----HHHHHHHHHHhHHhhccc----------HHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHh
Q 010932 372 GAE-NELSFQEWTQQV----QDMLNTKKFGDIAFRDKD----------FKNAIEYYSKLVSMMSVPSGTVFVRRALSYLM 436 (497)
Q Consensus 372 ~~~-~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~----------~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~ 436 (497)
.+. .++|++.+++++ ++..+|+.+|.++...|+ +++|++.|+++++ .+|+++.+|++|+.++.+
T Consensus 41 ~~~~~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~-~~pK~y~aW~hR~w~l~~ 119 (567)
T 1dce_A 41 AGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLR-VNPKSYGTWHHRCWLLSR 119 (567)
T ss_dssp TTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHH
Confidence 344 468899999988 788999999999999998 9999999999999 999999999999999999
Q ss_pred hh--cHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCC-ChHHHHHHHHHhhcCccccccCCC
Q 010932 437 IE--QAELALRDAMQAQVCLPEWPTAFYMQALALNKLG-METDAQDMLNDGASFEAKKQNSWR 496 (497)
Q Consensus 437 ~~--~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~-~~~~A~~~~~~a~~l~~~~~~~~~ 496 (497)
++ ++++|++.++++++++|++..||+++|.++..+| .+++|+++++++++++|.+..+|+
T Consensus 120 l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~ 182 (567)
T 1dce_A 120 LPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWH 182 (567)
T ss_dssp CSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHH
T ss_pred cccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHH
Confidence 99 7799999999999999999999999999999999 999999999999999999999996
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=99.43 E-value=1.2e-13 Score=131.12 Aligned_cols=131 Identities=8% Similarity=-0.059 Sum_probs=115.2
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
...+...|..+...|++++|+..|++++ .++..++++|.+++..|+|++|+..|++|++ ++|+++.+|+++|.+|
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~-~~p~~~~~~~~lg~~~ 82 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALE-LDGQSVKAHFFLGQCQ 82 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTT-SCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHH-hCCCCHHHHHHHHHHH
Confidence 4678889999999999999999999999 5789999999999999999999999999999 9999999999999999
Q ss_pred HhhhcHHHHHHHHHHHHHhCCCCh-----HH--------------------------HHHHHHHHHHCCChHHHHHHHHH
Q 010932 435 LMIEQAELALRDAMQAQVCLPEWP-----TA--------------------------FYMQALALNKLGMETDAQDMLND 483 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~~~-----~a--------------------------~~~~g~~~~~~~~~~~A~~~~~~ 483 (497)
..+|++++|+..|++|++++|++. .+ ...+|.. ..|++++|++.|++
T Consensus 83 ~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l--~~~~~~~A~~~~~~ 160 (281)
T 2c2l_A 83 LEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLTRL--IAAERERELEECQR 160 (281)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHH--HHHHHHHHHTTTSG
T ss_pred HHcCCHHHHHHHHHHHHHhCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH--HHHHHHHHHHHHHh
Confidence 999999999999999999999762 11 1122222 36899999999999
Q ss_pred hhcCccccc
Q 010932 484 GASFEAKKQ 492 (497)
Q Consensus 484 a~~l~~~~~ 492 (497)
|++++|.+.
T Consensus 161 al~~~p~~~ 169 (281)
T 2c2l_A 161 NHEGHEDDG 169 (281)
T ss_dssp GGTTTSCHH
T ss_pred hhccccchh
Confidence 999998653
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.43 E-value=8.3e-13 Score=119.24 Aligned_cols=102 Identities=13% Similarity=0.110 Sum_probs=95.8
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQAL 466 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 466 (497)
..+..++++|..++..|+|++|+..|++++. | ++.+|+++|.+|..+|++++|+..|++|++++|+++.+|+++|.
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~---~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~ 79 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQD---P-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 79 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSSS---C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHcC---C-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 4566789999999999999999999999975 3 68999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHhhcCccccc
Q 010932 467 ALNKLGMETDAQDMLNDGASFEAKKQ 492 (497)
Q Consensus 467 ~~~~~~~~~~A~~~~~~a~~l~~~~~ 492 (497)
+|..+|++++|+++|++|+++.|++.
T Consensus 80 ~~~~~~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 80 LYYQTEKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHHHcccHHHHHHHHHHHHHhCCCcc
Confidence 99999999999999999999888765
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=99.42 E-value=4.9e-13 Score=127.65 Aligned_cols=131 Identities=13% Similarity=0.106 Sum_probs=114.1
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHHH----------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhc------CCCC
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQVQ----------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSM------MSVP 422 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~~----------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~------~~p~ 422 (497)
...+...|..+...++++.|+..|+++++ .+..+.+.|.+++..|+|++|+.+|++|++. ..+.
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 194 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF 194 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhH
Confidence 44555688888889999999999999983 3567999999999999999999999999941 3344
Q ss_pred cHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCC------hHHHHHHHHHHHHCCC-hHHHHHHHHHhhcCcc
Q 010932 423 SGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEW------PTAFYMQALALNKLGM-ETDAQDMLNDGASFEA 489 (497)
Q Consensus 423 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~------~~a~~~~g~~~~~~~~-~~~A~~~~~~a~~l~~ 489 (497)
.+.+|+|+|.+|.++|+|++|+..+++|+++.++. +.+|+++|.+|..+|+ +++|+++|++|+.+..
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~ 268 (293)
T 3u3w_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFD 268 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 46799999999999999999999999999987555 8999999999999995 6999999999997754
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.42 E-value=9.8e-13 Score=107.05 Aligned_cols=91 Identities=8% Similarity=-0.081 Sum_probs=81.3
Q ss_pred cccchhhhhhHHHHHH-------HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHH
Q 010932 371 EGAENELSFQEWTQQV-------QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELA 443 (497)
Q Consensus 371 ~~~~~e~a~~~~~~~~-------~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A 443 (497)
..|++++|+..|++++ .++.+++.+|.+++..|+|++|+..|+++++ ++|+++.+++++|.++..+|++++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~-~~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVK-QFPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCCchHHHHHHHHHHHHcCCHHHH
Confidence 3578899999999987 3578899999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHhCCCChHHHH
Q 010932 444 LRDAMQAQVCLPEWPTAFY 462 (497)
Q Consensus 444 ~~~~~~al~l~p~~~~a~~ 462 (497)
+..|+++++++|+++....
T Consensus 81 ~~~~~~al~~~p~~~~~~~ 99 (117)
T 3k9i_A 81 VELLLKIIAETSDDETIQS 99 (117)
T ss_dssp HHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHHHHHhCCCcHHHHH
Confidence 9999999999999987654
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.41 E-value=4.5e-13 Score=125.79 Aligned_cols=134 Identities=11% Similarity=-0.016 Sum_probs=122.7
Q ss_pred hHHHHHHHHhccccccccchhhhhhHHHHHHH------------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcC----
Q 010932 356 TAVHDILLKTGYKDEEGAENELSFQEWTQQVQ------------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMM---- 419 (497)
Q Consensus 356 ~~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~------------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~---- 419 (497)
+.....+...|..+...|++++|+..|+++++ .+..+..+|.++...|++++|+..|.++++ +
T Consensus 40 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~-~~~~~ 118 (283)
T 3edt_B 40 PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALE-IREKV 118 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH-HHHHH
Confidence 35567888999999999999999999999873 356788999999999999999999999999 6
Q ss_pred ----CCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcC
Q 010932 420 ----SVPSGTVFVRRALSYLMIEQAELALRDAMQAQVC--------LPEWPTAFYMQALALNKLGMETDAQDMLNDGASF 487 (497)
Q Consensus 420 ----~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l--------~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l 487 (497)
+|....+|+++|.++..+|++++|+..|++++++ .|....+++++|.+|..+|++++|+..|++++++
T Consensus 119 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 119 LGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 5777899999999999999999999999999999 8888999999999999999999999999999987
Q ss_pred ccc
Q 010932 488 EAK 490 (497)
Q Consensus 488 ~~~ 490 (497)
.++
T Consensus 199 ~~~ 201 (283)
T 3edt_B 199 AHE 201 (283)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.41 E-value=4.4e-13 Score=140.75 Aligned_cols=135 Identities=13% Similarity=0.095 Sum_probs=115.7
Q ss_pred HHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcC------CCCc-HHHHH
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMM------SVPS-GTVFV 428 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~------~p~~-~~~~~ 428 (497)
..+...|..+...|++++|++.|++++ .++..+...|..+.+.|++++|+..|+++++ + +|++ ..+|.
T Consensus 442 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~-~~~~~~~~p~~~~~~~~ 520 (597)
T 2xpi_A 442 LPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNALL-LVKKTQSNEKPWAATWA 520 (597)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHHHSCCCSGGGHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHH-hhhccccchhhHHHHHH
Confidence 455667777777888888888888877 3577888899999999999999999999988 6 6665 78899
Q ss_pred HHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 429 RRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 429 ~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
++|.+|.+.|++++|+..|+++++++|+++.+|+.+|.+|...|++++|++.|+++++++|++..+|
T Consensus 521 ~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~ 587 (597)
T 2xpi_A 521 NLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLAITHLHESLAISPNEIMAS 587 (597)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999887655
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.41 E-value=3.6e-13 Score=129.57 Aligned_cols=132 Identities=14% Similarity=0.102 Sum_probs=124.2
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
...+...|..+...|++++|+..+++++ .++..+...|..+...|++++|+..|+++++ ++|+++.+|+++|.++
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~l~~~~ 250 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALD-INPGYVRVMYNMAVSY 250 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-cCCCCHHHHHHHHHHH
Confidence 4667788889999999999999999988 4578899999999999999999999999999 9999999999999999
Q ss_pred HhhhcHHHHHHHHHHHHHhCCC------------ChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccc
Q 010932 435 LMIEQAELALRDAMQAQVCLPE------------WPTAFYMQALALNKLGMETDAQDMLNDGASFEAKK 491 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~------------~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~ 491 (497)
..+|++++|+..|+++++++|+ +..+|+.+|.++..+|++++|...++++++..++.
T Consensus 251 ~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~~~~ 319 (327)
T 3cv0_A 251 SNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVELTYAQNVEPFAKE 319 (327)
T ss_dssp HHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHHHHTTCCSHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcchh
Confidence 9999999999999999999999 89999999999999999999999999999876654
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.41 E-value=2.6e-13 Score=129.50 Aligned_cols=138 Identities=8% Similarity=-0.088 Sum_probs=126.5
Q ss_pred HHHHHHHhcccccccc--chhhhhhHHHHHH----HHHHHHHHHHhHH----hhc---ccHHHHHHHHHHHhhcCCCCcH
Q 010932 358 VHDILLKTGYKDEEGA--ENELSFQEWTQQV----QDMLNTKKFGDIA----FRD---KDFKNAIEYYSKLVSMMSVPSG 424 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~--~~e~a~~~~~~~~----~~~~~~~~~g~~~----~~~---~~~~~Ai~~~~~ai~~~~p~~~ 424 (497)
...+|..+|......+ .++++++.++.++ ++..+|+.++.++ ... +++++++..++++++ .+|.|.
T Consensus 66 ~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~-~~pkny 144 (306)
T 3dra_A 66 HYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLS-SDPKNH 144 (306)
T ss_dssp CHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHH-HCTTCH
T ss_pred HHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHH-hCCCCH
Confidence 4456777777777777 8999999999988 7788999999999 666 799999999999999 999999
Q ss_pred HHHHHHHHHHHhhhcHH--HHHHHHHHHHHhCCCChHHHHHHHHHHHHCCC------hHHHHHHHHHhhcCccccccCCC
Q 010932 425 TVFVRRALSYLMIEQAE--LALRDAMQAQVCLPEWPTAFYMQALALNKLGM------ETDAQDMLNDGASFEAKKQNSWR 496 (497)
Q Consensus 425 ~~~~~~g~~~~~~~~~~--~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~------~~~A~~~~~~a~~l~~~~~~~~~ 496 (497)
.+|++|+.++..+|.++ ++++.++++|+++|.|..||++++.++..+++ ++++++++++++.++|.+..+|+
T Consensus 145 ~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~ 224 (306)
T 3dra_A 145 HVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWN 224 (306)
T ss_dssp HHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHH
T ss_pred HHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHH
Confidence 99999999999999999 99999999999999999999999999999998 99999999999999999999995
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.41 E-value=1e-12 Score=108.35 Aligned_cols=105 Identities=19% Similarity=0.300 Sum_probs=99.7
Q ss_pred HHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Q 010932 390 LNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALN 469 (497)
Q Consensus 390 ~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 469 (497)
.+++..|..++..|++++|+..|+++++ .+|++..+|+++|.++...|++++|+..++++++++|++..+++.+|.++.
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALE-LDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY 80 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHH-cCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 4678999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HCCChHHHHHHHHHhhcCccccccCC
Q 010932 470 KLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 470 ~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
..|++++|+..|++++++.|+....|
T Consensus 81 ~~~~~~~A~~~~~~~~~~~~~~~~~~ 106 (136)
T 2fo7_A 81 KQGDYDEAIEYYQKALELDPRSAEAW 106 (136)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCChHHH
Confidence 99999999999999999988765544
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.41 E-value=5.2e-13 Score=138.15 Aligned_cols=137 Identities=14% Similarity=0.043 Sum_probs=129.0
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHH---HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQV---QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
....+...|..+...++++.|+..|++++ .+...+..+|..+...|++++|+..|+++++ ++|+++.+|+++|.++
T Consensus 242 ~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~l~~~~ 320 (537)
T 3fp2_A 242 AALALCYTGIFHFLKNNLLDAQVLLQESINLHPTPNSYIFLALTLADKENSQEFFKFFQKAVD-LNPEYPPTYYHRGQMY 320 (537)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHH-HCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCCchHHHHHHHHHHHhcCHHHHHHHHHHHhc-cCCCCHHHHHHHHHHH
Confidence 45678888999999999999999999988 2378899999999999999999999999999 9999999999999999
Q ss_pred HhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 435 LMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
..+|++++|+..|+++++++|+++.+|+.+|.++..+|++++|+..|+++++++|++..+|
T Consensus 321 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~ 381 (537)
T 3fp2_A 321 FILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVP 381 (537)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHH
T ss_pred HhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 9999999999999999999999999999999999999999999999999999999877654
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.41 E-value=1.1e-12 Score=105.64 Aligned_cols=110 Identities=15% Similarity=0.068 Sum_probs=103.4
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
...+...|..+...++++.|+..|++++ .++..++.+|..++..|++++|+..|+++++ ++|+++.+|+++|.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~~a~~~ 82 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVD-LKPDWGKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHH-hCcccHHHHHHHHHHH
Confidence 4667888999999999999999999988 4688999999999999999999999999999 9999999999999999
Q ss_pred HhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Q 010932 435 LMIEQAELALRDAMQAQVCLPEWPTAFYMQALALN 469 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 469 (497)
..+|++++|+..|+++++++|+++.++..++.+..
T Consensus 83 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 83 EFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 99999999999999999999999999999988753
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.40 E-value=3.1e-13 Score=138.83 Aligned_cols=136 Identities=12% Similarity=0.022 Sum_probs=126.1
Q ss_pred HHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHH------HHHH
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGT------VFVR 429 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~------~~~~ 429 (497)
..+...|..+...|++++|+..|++++ .++..++.+|..+...|++++|+..|+++++ ++|+++. +|++
T Consensus 339 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~~~~ 417 (514)
T 2gw1_A 339 FPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYDLAIE-LENKLDGIYVGIAPLVG 417 (514)
T ss_dssp HHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHHTSSSCSSCSHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-hhhccchHHHHHHHHHH
Confidence 467778899999999999999999988 3578899999999999999999999999999 8888855 9999
Q ss_pred HHHHHHh---hhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCCC
Q 010932 430 RALSYLM---IEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSWR 496 (497)
Q Consensus 430 ~g~~~~~---~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~~ 496 (497)
+|.++.. +|++++|+..|+++++++|+++.+++.+|.+|..+|++++|++.|++|++++|++..+|+
T Consensus 418 l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 487 (514)
T 2gw1_A 418 KATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQ 487 (514)
T ss_dssp HHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHHH
T ss_pred HHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHHH
Confidence 9999999 999999999999999999999999999999999999999999999999999999877663
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=5.6e-13 Score=128.47 Aligned_cols=147 Identities=9% Similarity=0.014 Sum_probs=132.6
Q ss_pred hhhccchhHHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcc-cHHHHHHHHHHHhhcCCCCc
Q 010932 349 ACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDK-DFKNAIEYYSKLVSMMSVPS 423 (497)
Q Consensus 349 ~~~~~~~~~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~-~~~~Ai~~~~~ai~~~~p~~ 423 (497)
.|.-...+.+.+.+.............++|++.+++++ ++..+|+.++.++...| ++++++..++++|. .+|++
T Consensus 44 ~~~i~y~~~y~~~~~~~r~~~~~~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~-~nPKn 122 (349)
T 3q7a_A 44 VVPIMYSEEYKDAMDYFRAIAAKEEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAV-QNLKS 122 (349)
T ss_dssp SSCBCCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH-TTCCC
T ss_pred eeeeeeCHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH-hCCCc
Confidence 34444556777777666666666667789999999988 78899999999999999 59999999999999 99999
Q ss_pred HHHHHHHHHHHHhh-h-cHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChH--------HHHHHHHHhhcCcccccc
Q 010932 424 GTVFVRRALSYLMI-E-QAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMET--------DAQDMLNDGASFEAKKQN 493 (497)
Q Consensus 424 ~~~~~~~g~~~~~~-~-~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~--------~A~~~~~~a~~l~~~~~~ 493 (497)
+.+|+.|+.++..+ + +++++++.++++++++|++..||+.++.++..++.++ +++++++++++++|.+..
T Consensus 123 y~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~S 202 (349)
T 3q7a_A 123 YQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNS 202 (349)
T ss_dssp HHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHH
Confidence 99999999999999 8 9999999999999999999999999999999999998 999999999999999999
Q ss_pred CCC
Q 010932 494 SWR 496 (497)
Q Consensus 494 ~~~ 496 (497)
||+
T Consensus 203 AW~ 205 (349)
T 3q7a_A 203 AWG 205 (349)
T ss_dssp HHH
T ss_pred HHH
Confidence 996
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.2e-12 Score=135.43 Aligned_cols=130 Identities=8% Similarity=-0.057 Sum_probs=122.7
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
...+...|..+...|++++|++.|++++ .+...+..+|..+.+.|++++|++.|+++++ ..|++..+|+++|.+|
T Consensus 373 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~-~~~~~~~~~~~l~~~~ 451 (597)
T 2xpi_A 373 AVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAAR-LFQGTHLPYLFLGMQH 451 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-TTTTCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCccchHHHHHHHHHH
Confidence 4567778888999999999999999987 4688999999999999999999999999999 9999999999999999
Q ss_pred HhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcc
Q 010932 435 LMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEA 489 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~ 489 (497)
.+.|++++|+..|+++++++|+++.+|+.+|.+|...|++++|++.|++++++.|
T Consensus 452 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~ 506 (597)
T 2xpi_A 452 MQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVK 506 (597)
T ss_dssp HHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999999998843
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=8.2e-13 Score=124.05 Aligned_cols=138 Identities=10% Similarity=-0.015 Sum_probs=109.1
Q ss_pred cccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCC-CCcceeeeeeeeeCCceEEEEEcCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
.+.+....+.|+.+.||++... |..+++|+...........+.+|+.+|+.+. +..+.++++++...+..++||||++
T Consensus 15 ~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~ 93 (263)
T 3tm0_A 15 KYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEAD 93 (263)
T ss_dssp TSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCS
T ss_pred cceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecC
Confidence 3456666788888999999864 6889999987532233456999999999884 6778899999988888999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc-------------------------------------------
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNS------------------------------------------- 178 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~------------------------------------------- 178 (497)
|.+|.+.+. +......++.+++.+|..||+
T Consensus 94 G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (263)
T 3tm0_A 94 GVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKD 166 (263)
T ss_dssp SEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSS
T ss_pred CeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCC
Confidence 999987641 112234788899999999998
Q ss_pred ----------------CCCcccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 179 ----------------QNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 179 ----------------~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
.. ++|+|++|.|||+++++.+.|+||+.+.
T Consensus 167 ~~~l~~~l~~~~~~~~~~-l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 167 PRELYDFLKTEKPEEELV-FSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHHCCCCCCEE-EECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHhcCCCCCce-EECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 23 7899999999999876666799999764
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=99.39 E-value=2e-12 Score=105.27 Aligned_cols=113 Identities=15% Similarity=0.189 Sum_probs=106.0
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
...+...|..+...++++.|++.|.+++ .+...++..|..++..|++++|+..|+++++ .+|+++.+++++|.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~la~~~ 87 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALE-LDPNNAEAWYNLGNAY 87 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-hCCccHHHHHHHHHHH
Confidence 4667888889999999999999999988 3578899999999999999999999999999 9999999999999999
Q ss_pred HhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCC
Q 010932 435 LMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLG 472 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~ 472 (497)
..+|++++|+..|+++++++|+++.++..+|.++..+|
T Consensus 88 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 88 YKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999988765
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.39 E-value=6.1e-13 Score=104.51 Aligned_cols=93 Identities=14% Similarity=0.102 Sum_probs=86.5
Q ss_pred HHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHH-HHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Q 010932 392 TKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGT-VFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNK 470 (497)
Q Consensus 392 ~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~-~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 470 (497)
.+++|..++..|+|++|+..|+++++ .+|+++. +|+++|.+|..+|++++|+..|+++++++|++..++++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~-~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~------- 74 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQ-TEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR------- 74 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHH-HCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH-------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH-HCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH-------
Confidence 46789999999999999999999999 9999999 99999999999999999999999999999999998866
Q ss_pred CCChHHHHHHHHHhhcCcccccc
Q 010932 471 LGMETDAQDMLNDGASFEAKKQN 493 (497)
Q Consensus 471 ~~~~~~A~~~~~~a~~l~~~~~~ 493 (497)
+.+.+|+..|+++..++|....
T Consensus 75 -~~~~~a~~~~~~~~~~~p~~~~ 96 (99)
T 2kc7_A 75 -KMVMDILNFYNKDMYNQLEHHH 96 (99)
T ss_dssp -HHHHHHHHHHCCTTHHHHCCSS
T ss_pred -HHHHHHHHHHHHHhccCccccc
Confidence 6788999999999998887654
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.39 E-value=5.7e-13 Score=135.71 Aligned_cols=135 Identities=14% Similarity=0.073 Sum_probs=111.3
Q ss_pred HHHHHhccccccccchhhhhhHHHHHHH-------------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcC-------
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQVQ-------------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMM------- 419 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~~-------------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~------- 419 (497)
..+..+|..+...|++++|++.|+++++ .+..+.++|.+++.+|+|++|+.+|+++++ +
T Consensus 52 ~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~-i~~~~~~~ 130 (472)
T 4g1t_A 52 TMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKH-VCEKFSSP 130 (472)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHHHSCCS
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH-HhHhcccc
Confidence 4566788888889999999999998873 255678899999999999999999999987 4
Q ss_pred -CCCcHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHhCCCChHHHHHHHHHHH---HCCChHHHHHHHHHhhcCcccccc
Q 010932 420 -SVPSGTVFVRRALSYLMI--EQAELALRDAMQAQVCLPEWPTAFYMQALALN---KLGMETDAQDMLNDGASFEAKKQN 493 (497)
Q Consensus 420 -~p~~~~~~~~~g~~~~~~--~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~---~~~~~~~A~~~~~~a~~l~~~~~~ 493 (497)
.+..+.++.++|.++..+ ++|++|+..|++|++++|+++++++.+|.++. ..+++++|++.|++|++++|++..
T Consensus 131 ~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~ 210 (472)
T 4g1t_A 131 YRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQY 210 (472)
T ss_dssp SCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHH
T ss_pred cchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchH
Confidence 345678899998887765 47999999999999999999999999988754 467788899999999999888765
Q ss_pred CC
Q 010932 494 SW 495 (497)
Q Consensus 494 ~~ 495 (497)
+|
T Consensus 211 ~~ 212 (472)
T 4g1t_A 211 LK 212 (472)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.39 E-value=2.8e-12 Score=98.66 Aligned_cols=85 Identities=19% Similarity=0.207 Sum_probs=80.8
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQAL 466 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 466 (497)
.++..++.+|..++..|+|++|+..|+++++ ++|+++.+|+++|.++..+|++++|+..|+++++++|+++.+++++|.
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 85 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALE-LDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 85 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHh-cCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 3567889999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHCC
Q 010932 467 ALNKLG 472 (497)
Q Consensus 467 ~~~~~~ 472 (497)
++..+|
T Consensus 86 ~~~~~g 91 (91)
T 1na3_A 86 AKQKQG 91 (91)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 998765
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=99.38 E-value=5.8e-13 Score=111.15 Aligned_cols=115 Identities=10% Similarity=-0.049 Sum_probs=104.8
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHH
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALS 433 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~ 433 (497)
....+...|..+...++++.|+..|++++ .++..++.+|.+++..|+|++|+..|+++++ ++|+++.+|+++|.+
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~-~~p~~~~~~~~l~~~ 86 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALE-LDGQSVKAHFFLGQC 86 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHH-hCchhHHHHHHHHHH
Confidence 35678899999999999999999999998 5688999999999999999999999999999 999999999999999
Q ss_pred HHhhhcHHHHHHHHHHHHHhCCC-----ChHHHHHHHHHHHHCCC
Q 010932 434 YLMIEQAELALRDAMQAQVCLPE-----WPTAFYMQALALNKLGM 473 (497)
Q Consensus 434 ~~~~~~~~~A~~~~~~al~l~p~-----~~~a~~~~g~~~~~~~~ 473 (497)
+..+|++++|+..|+++++++|+ +..++..+..+..+...
T Consensus 87 ~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~~ 131 (137)
T 3q49_B 87 QLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWN 131 (137)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 77777777776655543
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.8e-12 Score=123.75 Aligned_cols=131 Identities=14% Similarity=0.111 Sum_probs=112.9
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----------HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhc--CCCCc---
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----------QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSM--MSVPS--- 423 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----------~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~--~~p~~--- 423 (497)
...+...|..+...|++++|+..|++++ ..+..+++.|..++..|+|++|+.+|++|++. ..|++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~ 194 (293)
T 2qfc_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF 194 (293)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccc
Confidence 3445567788888999999999999988 23778999999999999999999999999941 44553
Q ss_pred -HHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCC------ChHHHHHHHHHHHHCCChHHH-HHHHHHhhcCcc
Q 010932 424 -GTVFVRRALSYLMIEQAELALRDAMQAQVCLPE------WPTAFYMQALALNKLGMETDA-QDMLNDGASFEA 489 (497)
Q Consensus 424 -~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~------~~~a~~~~g~~~~~~~~~~~A-~~~~~~a~~l~~ 489 (497)
..+++|+|.+|..+|+|++|+..|++|+++.++ .+.+|+++|.+|..+|++++| ..+|++|+.+..
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~ 268 (293)
T 2qfc_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFD 268 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 269999999999999999999999999998654 278999999999999999999 888999987653
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=99.38 E-value=6.8e-13 Score=104.82 Aligned_cols=76 Identities=16% Similarity=0.097 Sum_probs=66.1
Q ss_pred CCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccC
Q 010932 419 MSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 419 ~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
.+|+++.+|+++|.+|..+|+|++|+..|+++++++|+++.+|+++|.+|..+|++++|++.|++|+++.++..+.
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~ 77 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQ 77 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCH
T ss_pred CCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCch
Confidence 5788999999999999999999999999999999999999999999999999999999999999999888776543
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.5e-12 Score=111.14 Aligned_cols=134 Identities=14% Similarity=0.103 Sum_probs=116.9
Q ss_pred hHHHHHHHHhccccccccchhhhhhHHHHHHHH----------HHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc--
Q 010932 356 TAVHDILLKTGYKDEEGAENELSFQEWTQQVQD----------MLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS-- 423 (497)
Q Consensus 356 ~~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~~----------~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~-- 423 (497)
......+...|..+...+++++|+..+.++++. +..+...|..++..|++++|+..|+++++ +.+..
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~-~~~~~~~ 84 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLL-LARQLKD 84 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-HHHHhCC
Confidence 355678889999999999999999999998822 34788999999999999999999999998 64442
Q ss_pred ----HHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCC------ChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccc
Q 010932 424 ----GTVFVRRALSYLMIEQAELALRDAMQAQVCLPE------WPTAFYMQALALNKLGMETDAQDMLNDGASFEAK 490 (497)
Q Consensus 424 ----~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~------~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~ 490 (497)
..+++++|.++..+|++++|+..+++++++.+. ...+++.+|.++..+|++++|++.+++|+++..+
T Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 85 RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 678999999999999999999999999988432 3678999999999999999999999999987544
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.37 E-value=2.4e-12 Score=120.79 Aligned_cols=132 Identities=10% Similarity=-0.009 Sum_probs=119.7
Q ss_pred hHHHHHHHHhccccccccchhhhhhHHHHHHH------------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcC----
Q 010932 356 TAVHDILLKTGYKDEEGAENELSFQEWTQQVQ------------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMM---- 419 (497)
Q Consensus 356 ~~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~------------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~---- 419 (497)
+.....+...|..+...|++++|+..|.++++ .+..+..+|.+++..|++++|+..|+++++ +
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~-~~~~~ 160 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALE-IYATR 160 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH-HHHHH
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-HHHHh
Confidence 34567889999999999999999999999873 366788999999999999999999999999 7
Q ss_pred ----CCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHh------------------------------------------
Q 010932 420 ----SVPSGTVFVRRALSYLMIEQAELALRDAMQAQVC------------------------------------------ 453 (497)
Q Consensus 420 ----~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l------------------------------------------ 453 (497)
.|....++.++|.++..+|++++|+..+++++++
T Consensus 161 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (283)
T 3edt_B 161 LGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSW 240 (283)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC----------
T ss_pred cCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 7777899999999999999999999999999987
Q ss_pred -------CCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCc
Q 010932 454 -------LPEWPTAFYMQALALNKLGMETDAQDMLNDGASFE 488 (497)
Q Consensus 454 -------~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~ 488 (497)
.|..+.+++.+|.+|..+|++++|+..|++|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 282 (283)
T 3edt_B 241 YKACKVDSPTVNTTLRSLGALYRRQGKLEAAHTLEDCASRNR 282 (283)
T ss_dssp --CCCCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Confidence 25667899999999999999999999999999763
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.37 E-value=2.9e-12 Score=108.04 Aligned_cols=112 Identities=13% Similarity=0.036 Sum_probs=104.4
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHH----HH---HHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHH
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQV----QD---MLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRR 430 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~---~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~ 430 (497)
....+...|..+...++++.|++.|++++ ++ ...++.+|..++..|+|++|+..|+++++ ++|+++.+|+++
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~~ 105 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIE-KDGGDVKALYRR 105 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHh-hCccCHHHHHHH
Confidence 45778889999999999999999999998 33 88999999999999999999999999999 999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Q 010932 431 ALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNK 470 (497)
Q Consensus 431 g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 470 (497)
|.++..+|++++|+..|+++++++|++..++..++.+...
T Consensus 106 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 145 (148)
T 2dba_A 106 SQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNISGP 145 (148)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHCS
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999988877544
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.37 E-value=9.6e-13 Score=125.59 Aligned_cols=132 Identities=11% Similarity=0.028 Sum_probs=120.6
Q ss_pred hhHHHHHHHHhccccccccchhhhhhHHHHHHH------------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcC---
Q 010932 355 LTAVHDILLKTGYKDEEGAENELSFQEWTQQVQ------------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMM--- 419 (497)
Q Consensus 355 ~~~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~------------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~--- 419 (497)
.+.....+...|..+...|++++|+..|+++++ .+..+..+|..++..|++++|+..|+++++ +
T Consensus 23 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~-~~~~ 101 (311)
T 3nf1_A 23 IPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALA-IREK 101 (311)
T ss_dssp SCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHHH
T ss_pred chHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HHHH
Confidence 346678899999999999999999999999874 356788999999999999999999999998 5
Q ss_pred -----CCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhC--------CCChHHHHHHHHHHHHCCChHHHHHHHHHhhc
Q 010932 420 -----SVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCL--------PEWPTAFYMQALALNKLGMETDAQDMLNDGAS 486 (497)
Q Consensus 420 -----~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~--------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~ 486 (497)
.|....+++++|.++..+|++++|+..|++++++. |....+++++|.++..+|++++|++.|+++++
T Consensus 102 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 181 (311)
T 3nf1_A 102 TLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALE 181 (311)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 46678899999999999999999999999999984 77789999999999999999999999999998
Q ss_pred C
Q 010932 487 F 487 (497)
Q Consensus 487 l 487 (497)
+
T Consensus 182 ~ 182 (311)
T 3nf1_A 182 I 182 (311)
T ss_dssp H
T ss_pred H
Confidence 7
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.5e-12 Score=129.10 Aligned_cols=134 Identities=19% Similarity=0.189 Sum_probs=120.2
Q ss_pred hHHHHHHHHhccccccccchhhhhhHHHHHHH-----------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc-
Q 010932 356 TAVHDILLKTGYKDEEGAENELSFQEWTQQVQ-----------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS- 423 (497)
Q Consensus 356 ~~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~-----------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~- 423 (497)
......+...|..+...|+++.|+..+.++++ .+..+...|.++...|+|++|+..|++|++ +.+..
T Consensus 140 ~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~-~~~~~~ 218 (383)
T 3ulq_A 140 IEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYS-MAEAEK 218 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH-HHHHcC
Confidence 34678899999999999999999999999883 356788999999999999999999999998 64433
Q ss_pred -----HHHHHHHHHHHHhhhcHHHHHHHHHHHHH-----hC-CCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccc
Q 010932 424 -----GTVFVRRALSYLMIEQAELALRDAMQAQV-----CL-PEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAK 490 (497)
Q Consensus 424 -----~~~~~~~g~~~~~~~~~~~A~~~~~~al~-----l~-p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~ 490 (497)
+.+++++|.+|..+|++++|+..|++|++ .+ |..+.+++++|.++..+|++++|++.|++|+++.++
T Consensus 219 ~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 296 (383)
T 3ulq_A 219 QPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQK 296 (383)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999 46 888999999999999999999999999999988544
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=99.37 E-value=3.8e-12 Score=119.86 Aligned_cols=122 Identities=9% Similarity=0.004 Sum_probs=60.0
Q ss_pred HHHHhcccccc----ccchhhhhhHHHHHH--HHHHHHHHHHhHHhh----cccHHHHHHHHHHHhhcCCCCcHHHHHHH
Q 010932 361 ILLKTGYKDEE----GAENELSFQEWTQQV--QDMLNTKKFGDIAFR----DKDFKNAIEYYSKLVSMMSVPSGTVFVRR 430 (497)
Q Consensus 361 ~~~~~g~~~~~----~~~~e~a~~~~~~~~--~~~~~~~~~g~~~~~----~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~ 430 (497)
.+..+|..+.. .+++++|+..|++++ .++.+++.+|..+.. .+++++|+..|++|++ . +++.+++++
T Consensus 40 a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~-~--~~~~a~~~l 116 (273)
T 1ouv_A 40 GCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACD-L--KYAEGCASL 116 (273)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH-T--TCHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHH-c--CCccHHHHH
Confidence 33444444444 444555555555444 334444555555554 5555555555555555 3 244555555
Q ss_pred HHHHHh----hhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH----CCChHHHHHHHHHhhcC
Q 010932 431 ALSYLM----IEQAELALRDAMQAQVCLPEWPTAFYMQALALNK----LGMETDAQDMLNDGASF 487 (497)
Q Consensus 431 g~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~~~~~~A~~~~~~a~~l 487 (497)
|.+|.. .+++++|+..|++|++++ ++.+++++|.+|.. .+++++|+..|++|+++
T Consensus 117 g~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~ 179 (273)
T 1ouv_A 117 GGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL 179 (273)
T ss_dssp HHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 555555 555555555555555443 34445555555554 55555555555555444
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.36 E-value=8.4e-13 Score=115.87 Aligned_cols=128 Identities=10% Similarity=-0.049 Sum_probs=108.8
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHHHH---HHHHHHHHhHHh-hcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHH
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQVQD---MLNTKKFGDIAF-RDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALS 433 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~~---~~~~~~~g~~~~-~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~ 433 (497)
....+...|..+...|++++|+..|++++.. +..+...+...+ ..++..+|+..|+++++ ++|+++.+++++|.+
T Consensus 39 ~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~-~~P~~~~~~~~la~~ 117 (176)
T 2r5s_A 39 RGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQAAESPELKRLEQELA-ANPDNFELACELAVQ 117 (176)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHHTSCHHHHHHHHHHH-HSTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhhcccchHHHHHHHHHH-hCCCCHHHHHHHHHH
Confidence 4567888899999999999999999987632 333333443322 33445568999999999 999999999999999
Q ss_pred HHhhhcHHHHHHHHHHHHHhCCCC--hHHHHHHHHHHHHCCChHHHHHHHHHhhc
Q 010932 434 YLMIEQAELALRDAMQAQVCLPEW--PTAFYMQALALNKLGMETDAQDMLNDGAS 486 (497)
Q Consensus 434 ~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~~~~~~~~~~A~~~~~~a~~ 486 (497)
+..+|++++|+..|+++++++|++ +.+++++|.++..+|++++|+..|++++.
T Consensus 118 ~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 118 YNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 999999999999999999999986 66999999999999999999999999874
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.36 E-value=7.8e-12 Score=119.26 Aligned_cols=132 Identities=10% Similarity=-0.036 Sum_probs=113.1
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHHH----------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc----
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQVQ----------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS---- 423 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~----------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~---- 423 (497)
....+...+..+...+++++|++.+.++++ ....++..|..+...|+|++|+..|++|++ +.+..
T Consensus 74 ~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~-~~~~~~~~~ 152 (293)
T 2qfc_A 74 RKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLN-QQLTGIDVY 152 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHT-TCCCSSCTT
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HHhcCCchH
Confidence 345566777888889999999999988772 335567789999999999999999999998 65443
Q ss_pred --HHHHHHHHHHHHhhhcHHHHHHHHHHHH---HhCCCCh----HHHHHHHHHHHHCCChHHHHHHHHHhhcCccc
Q 010932 424 --GTVFVRRALSYLMIEQAELALRDAMQAQ---VCLPEWP----TAFYMQALALNKLGMETDAQDMLNDGASFEAK 490 (497)
Q Consensus 424 --~~~~~~~g~~~~~~~~~~~A~~~~~~al---~l~p~~~----~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~ 490 (497)
+.+|+++|.+|..+|+|++|+..|++|+ +..|++. .+++++|.+|..+|+|++|+.+|++|+++.++
T Consensus 153 ~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 153 QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 6799999999999999999999999999 5566643 69999999999999999999999999988754
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.8e-12 Score=123.66 Aligned_cols=133 Identities=10% Similarity=0.016 Sum_probs=120.5
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHHH------------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcC-----
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQVQ------------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMM----- 419 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~------------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~----- 419 (497)
.....+...|..+...|++++|+..|+++++ .+..+..+|..+...|++++|+..|+++++ +
T Consensus 109 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~-~~~~~~ 187 (311)
T 3nf1_A 109 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALE-IYQTKL 187 (311)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH-HHHHTS
T ss_pred HHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-HHHHHh
Confidence 4567788899999999999999999999873 356688999999999999999999999999 7
Q ss_pred ---CCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHh-------------------------------------------
Q 010932 420 ---SVPSGTVFVRRALSYLMIEQAELALRDAMQAQVC------------------------------------------- 453 (497)
Q Consensus 420 ---~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l------------------------------------------- 453 (497)
+|....+++++|.+|..+|++++|+..|++++++
T Consensus 188 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 267 (311)
T 3nf1_A 188 GPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWY 267 (311)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHH
Confidence 7777889999999999999999999999999985
Q ss_pred ------CCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccc
Q 010932 454 ------LPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAK 490 (497)
Q Consensus 454 ------~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~ 490 (497)
+|..+.+++.+|.+|..+|++++|+++|++|+++.|+
T Consensus 268 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 268 KACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp ------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC-
T ss_pred hhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc
Confidence 5777899999999999999999999999999998765
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.36 E-value=2.4e-12 Score=123.79 Aligned_cols=129 Identities=12% Similarity=0.043 Sum_probs=96.2
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHH----HHHH-HHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQV----QDML-NTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRAL 432 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~-~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~ 432 (497)
....+...|..+...|+++.|.+.|++++ .++. .|...|..+.+.|++++|+..|++|++ .+|.++.+|...+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~-~~p~~~~~~~~~a~ 176 (308)
T 2ond_A 98 NMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARE-DARTRHHVYVTAAL 176 (308)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHT-STTCCTHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHh-cCCCCHHHHHHHHH
Confidence 34556666666667777777777777777 2343 677777777777888888888888887 77777777776665
Q ss_pred HHH-hhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcC
Q 010932 433 SYL-MIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASF 487 (497)
Q Consensus 433 ~~~-~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l 487 (497)
... .+|++++|+..|++|++++|+++.+|..+|..+..+|++++|+..|++|++.
T Consensus 177 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 177 MEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHS
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 543 3678888888888888888888888888888888888888888888888874
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.3e-12 Score=134.26 Aligned_cols=134 Identities=10% Similarity=0.034 Sum_probs=127.2
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
...+...|..+...|+++.|+..|++++ .+...+..+|..++..|++++|+..|+++++ ++|+++.+|+++|.++
T Consensus 270 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~l~~~~ 348 (514)
T 2gw1_A 270 VNSYIYMALIMADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDFDKAKE-LDPENIFPYIQLACLA 348 (514)
T ss_dssp HHHHHHHHHHHHTSSCCTTGGGHHHHHHTTCTTCTHHHHHHHHHHHHTTCTTHHHHHHHHHHH-TCSSCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHhhcCcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-hChhhHHHHHHHHHHH
Confidence 5667888899999999999999999988 5678899999999999999999999999999 9999999999999999
Q ss_pred HhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccccc
Q 010932 435 LMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQN 493 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~ 493 (497)
..+|++++|+..|+++++++|+++.+|+.+|.++..+|++++|+..|+++++++|+...
T Consensus 349 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 407 (514)
T 2gw1_A 349 YRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDG 407 (514)
T ss_dssp TTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSS
T ss_pred HHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccch
Confidence 99999999999999999999999999999999999999999999999999999988765
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=1.2e-12 Score=126.20 Aligned_cols=137 Identities=8% Similarity=-0.139 Sum_probs=126.7
Q ss_pred HHHHHHhcccccccc-chhhhhhHHHHHH----HHHHHHHHHHhHHhhc-c-cHHHHHHHHHHHhhcCCCCcHHHHHHHH
Q 010932 359 HDILLKTGYKDEEGA-ENELSFQEWTQQV----QDMLNTKKFGDIAFRD-K-DFKNAIEYYSKLVSMMSVPSGTVFVRRA 431 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~-~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~-~-~~~~Ai~~~~~ai~~~~p~~~~~~~~~g 431 (497)
..+|..++......+ .++++++.+++++ ++..+|..++.++... + +++++++.+.++++ .+|.|..+|++|+
T Consensus 88 ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~-~dpkNy~AW~~R~ 166 (349)
T 3q7a_A 88 YTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLL-PDPKNYHTWAYLH 166 (349)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTS-SCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH-hCCCCHHHHHHHH
Confidence 456666666666666 4899999999988 7899999999999998 8 99999999999999 9999999999999
Q ss_pred HHHHhhhcHH--------HHHHHHHHHHHhCCCChHHHHHHHHHHHHCCC-------hHHHHHHHHHhhcCccccccCCC
Q 010932 432 LSYLMIEQAE--------LALRDAMQAQVCLPEWPTAFYMQALALNKLGM-------ETDAQDMLNDGASFEAKKQNSWR 496 (497)
Q Consensus 432 ~~~~~~~~~~--------~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~-------~~~A~~~~~~a~~l~~~~~~~~~ 496 (497)
.++.++|.++ ++++.++++|+++|.|..||++++.++..+++ ++++++++++|+.++|++..+|+
T Consensus 167 wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~~P~n~SaW~ 246 (349)
T 3q7a_A 167 WLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLIPHNVSAWN 246 (349)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 9999999998 99999999999999999999999999999997 79999999999999999999995
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=1.4e-12 Score=125.23 Aligned_cols=121 Identities=7% Similarity=-0.011 Sum_probs=114.0
Q ss_pred hhhhhhHHHHHH----HHHHHHHHHHhHHhhcc--cHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhc-HHHHHHHH
Q 010932 375 NELSFQEWTQQV----QDMLNTKKFGDIAFRDK--DFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQ-AELALRDA 447 (497)
Q Consensus 375 ~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~--~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~-~~~A~~~~ 447 (497)
++.++..++.++ ++..+|..++.++...+ ++++++.+++++++ .+|.|..+|.+|+.++..+|. ++++++.+
T Consensus 90 l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~-~dprNy~AW~~R~~vl~~l~~~~~eel~~~ 168 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLE-ADERNFHCWDYRRFVAAQAAVAPAEELAFT 168 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 577888888877 78999999999999999 49999999999999 999999999999999999999 69999999
Q ss_pred HHHHHhCCCChHHHHHHHHHHHHC--------------CChHHHHHHHHHhhcCccccccCCC
Q 010932 448 MQAQVCLPEWPTAFYMQALALNKL--------------GMETDAQDMLNDGASFEAKKQNSWR 496 (497)
Q Consensus 448 ~~al~l~p~~~~a~~~~g~~~~~~--------------~~~~~A~~~~~~a~~l~~~~~~~~~ 496 (497)
+++|+++|.|..||++++.++..+ +.++++++++++|+.++|+++.+|+
T Consensus 169 ~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~ 231 (331)
T 3dss_A 169 DSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWF 231 (331)
T ss_dssp HHHHHHCSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 999999999999999999999998 5699999999999999999999994
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.35 E-value=9.9e-13 Score=126.51 Aligned_cols=137 Identities=13% Similarity=0.038 Sum_probs=119.7
Q ss_pred chhHHHHHHHHhccccccccchhhhhhHHHHHHH----------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCC-
Q 010932 354 DLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQ----------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVP- 422 (497)
Q Consensus 354 ~~~~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~----------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~- 422 (497)
+.......+...|..+...+++++|+..|.++++ .+..+.+.|.++...|+|++|+.+|++|++ +.+.
T Consensus 31 ~~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~-l~~~~ 109 (307)
T 2ifu_A 31 DYDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASV-MYVEN 109 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHH-HHHTT
T ss_pred CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH-HHHHc
Confidence 3455667777788888899999999999999882 366888999999999999999999999998 6332
Q ss_pred -----cHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCC------hHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccc
Q 010932 423 -----SGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEW------PTAFYMQALALNKLGMETDAQDMLNDGASFEAKK 491 (497)
Q Consensus 423 -----~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~------~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~ 491 (497)
.+.+|.++|.+|.. |++++|+..|++|+++.|.. ..++.++|.+|..+|+|++|+.+|++|+++.++.
T Consensus 110 g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 110 GTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp TCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 25789999999999 99999999999999998764 6899999999999999999999999999987765
Q ss_pred c
Q 010932 492 Q 492 (497)
Q Consensus 492 ~ 492 (497)
.
T Consensus 189 ~ 189 (307)
T 2ifu_A 189 E 189 (307)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=1.1e-12 Score=124.98 Aligned_cols=127 Identities=10% Similarity=-0.124 Sum_probs=118.1
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
.+.+..+|..+...|++++|+..+++++ +........+..+...+++++|+..|+++++ .+|+++.+++++|.+|
T Consensus 151 ~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~-~~P~~~~~~~~la~~l 229 (287)
T 3qou_A 151 GEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVA-ENPEDAALATQLALQL 229 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHH-HCTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHh-cCCccHHHHHHHHHHH
Confidence 4678888999999999999999999876 4556667778888899999999999999999 9999999999999999
Q ss_pred HhhhcHHHHHHHHHHHHHhCCCC--hHHHHHHHHHHHHCCChHHHHHHHHHhhc
Q 010932 435 LMIEQAELALRDAMQAQVCLPEW--PTAFYMQALALNKLGMETDAQDMLNDGAS 486 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~~~~~~~~~~A~~~~~~a~~ 486 (497)
..+|++++|+..|.++++++|++ ..++.++|.+|..+|+.++|...|++++.
T Consensus 230 ~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 230 HQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 99999999999999999999999 99999999999999999999999999874
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.1e-12 Score=117.16 Aligned_cols=127 Identities=13% Similarity=-0.026 Sum_probs=77.8
Q ss_pred HHHHHHhcccccccc----chhhhhhHHHHHH--HHHHHHHHHHhHHhh----cccHHHHHHHHHHHhhcCCC--CcHHH
Q 010932 359 HDILLKTGYKDEEGA----ENELSFQEWTQQV--QDMLNTKKFGDIAFR----DKDFKNAIEYYSKLVSMMSV--PSGTV 426 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~----~~e~a~~~~~~~~--~~~~~~~~~g~~~~~----~~~~~~Ai~~~~~ai~~~~p--~~~~~ 426 (497)
...+..+|..+.. + ++++|+..|++++ .++.+++++|..+.. .+++++|+..|++|++ ..+ .++.+
T Consensus 50 ~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~-~~~~~~~~~a 127 (212)
T 3rjv_A 50 GDALALLAQLKIR-NPQQADYPQARQLAEKAVEAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAAR-DSESDAAVDA 127 (212)
T ss_dssp HHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTS-STTSHHHHHH
T ss_pred HHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHH-cCCCcchHHH
Confidence 3445555555555 4 5666666666655 455666666666665 5666666666666666 555 23666
Q ss_pred HHHHHHHHHh----hhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHC-C-----ChHHHHHHHHHhhcCc
Q 010932 427 FVRRALSYLM----IEQAELALRDAMQAQVCLPEWPTAFYMQALALNKL-G-----METDAQDMLNDGASFE 488 (497)
Q Consensus 427 ~~~~g~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~-~-----~~~~A~~~~~~a~~l~ 488 (497)
++++|.+|.. .+++++|+..|++|+++ |.++.+++++|.+|... | ++++|+..|++|.+..
T Consensus 128 ~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g 198 (212)
T 3rjv_A 128 QMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEG 198 (212)
T ss_dssp HHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcC
Confidence 6666666666 56666666666666666 55556666666666554 2 5666666666666544
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=99.32 E-value=3.7e-12 Score=119.88 Aligned_cols=130 Identities=15% Similarity=0.079 Sum_probs=114.7
Q ss_pred HHHHHHhcccccc----ccchhhhhhHHHHHH--HHHHHHHHHHhHHhh----cccHHHHHHHHHHHhhcCCCCcHHHHH
Q 010932 359 HDILLKTGYKDEE----GAENELSFQEWTQQV--QDMLNTKKFGDIAFR----DKDFKNAIEYYSKLVSMMSVPSGTVFV 428 (497)
Q Consensus 359 ~~~~~~~g~~~~~----~~~~e~a~~~~~~~~--~~~~~~~~~g~~~~~----~~~~~~Ai~~~~~ai~~~~p~~~~~~~ 428 (497)
...+...|..+.. .+++++|+..|++++ .++.++++.|..+.. .+++++|+..|+++++ . .++.+++
T Consensus 110 ~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~-~--~~~~a~~ 186 (273)
T 1ouv_A 110 AEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACD-L--KDSPGCF 186 (273)
T ss_dssp HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH-T--TCHHHHH
T ss_pred ccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH-C--CCHHHHH
Confidence 4566777777777 889999999999988 567888999999998 9999999999999999 6 4588999
Q ss_pred HHHHHHHh----hhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH----CCChHHHHHHHHHhhcCcccccc
Q 010932 429 RRALSYLM----IEQAELALRDAMQAQVCLPEWPTAFYMQALALNK----LGMETDAQDMLNDGASFEAKKQN 493 (497)
Q Consensus 429 ~~g~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~~~~~~A~~~~~~a~~l~~~~~~ 493 (497)
++|.+|.. .+++++|+..|+++++++| +.+++++|.+|.. .+++++|+++|++|++++|....
T Consensus 187 ~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~--~~a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~ 257 (273)
T 1ouv_A 187 NAGNMYHHGEGATKNFKEALARYSKACELEN--GGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGAC 257 (273)
T ss_dssp HHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHcCCCCCccHHHHHHHHHHHHhCCC--HHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHcCCHHHH
Confidence 99999999 9999999999999999876 8899999999999 99999999999999999887654
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.32 E-value=4.2e-12 Score=122.08 Aligned_cols=131 Identities=5% Similarity=-0.132 Sum_probs=102.9
Q ss_pred HHHHhccccccccchhhhhhHHHHHHH----HHHHHHHHHhHHhh-cccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHH
Q 010932 361 ILLKTGYKDEEGAENELSFQEWTQQVQ----DMLNTKKFGDIAFR-DKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYL 435 (497)
Q Consensus 361 ~~~~~g~~~~~~~~~e~a~~~~~~~~~----~~~~~~~~g~~~~~-~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~ 435 (497)
.+...|..+...|.+++|.+.|+++++ ....+...|...+. .|++++|+..|+++++ .+|+++.+|.++|..+.
T Consensus 136 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~-~~p~~~~~~~~~~~~~~ 214 (308)
T 2ond_A 136 VYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLK-KYGDIPEYVLAYIDYLS 214 (308)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCCcHHHHHHHHHHHH
Confidence 566666666677888888888888872 34455555544433 6888888888888888 88888888888888888
Q ss_pred hhhcHHHHHHHHHHHHHh---CCC-ChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccc
Q 010932 436 MIEQAELALRDAMQAQVC---LPE-WPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQ 492 (497)
Q Consensus 436 ~~~~~~~A~~~~~~al~l---~p~-~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~ 492 (497)
.+|++++|+..|++|++. +|+ ...+|...+..+...|++++|...+++|+++.|+..
T Consensus 215 ~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~~g~~~~a~~~~~~a~~~~p~~~ 275 (308)
T 2ond_A 215 HLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFREEY 275 (308)
T ss_dssp TTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTTTT
T ss_pred HCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHccccc
Confidence 888888888888888885 554 677888888888888888888888888888888754
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.32 E-value=4.7e-12 Score=125.39 Aligned_cols=134 Identities=12% Similarity=0.087 Sum_probs=120.6
Q ss_pred hHHHHHHHHhccccccccchhhhhhHHHHHHH-----------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCC---
Q 010932 356 TAVHDILLKTGYKDEEGAENELSFQEWTQQVQ-----------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSV--- 421 (497)
Q Consensus 356 ~~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~-----------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p--- 421 (497)
......+...|..+...|+++.|+..+.++++ .+..+...|.++...|+|++|+..|.+|++ +.+
T Consensus 138 ~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~-~~~~~~ 216 (378)
T 3q15_A 138 IEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALE-LAMDIQ 216 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-HHHHcC
Confidence 45678889999999999999999999999882 366788999999999999999999999998 532
Q ss_pred ---CcHHHHHHHHHHHHhhhcHHHHHHHHHHHHH-----hCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccc
Q 010932 422 ---PSGTVFVRRALSYLMIEQAELALRDAMQAQV-----CLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAK 490 (497)
Q Consensus 422 ---~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~-----l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~ 490 (497)
..+.+++++|.+|..+|++++|+..|++|++ .+|..+.+++++|.++..+|++++|+..|++|+++.++
T Consensus 217 ~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 217 NDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 2356899999999999999999999999999 78889999999999999999999999999999988654
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=99.32 E-value=4.8e-12 Score=104.30 Aligned_cols=112 Identities=13% Similarity=0.031 Sum_probs=98.8
Q ss_pred HHHHhccccccccchhhhhhHHHHHHH----HH---HHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc---HHHHHHH
Q 010932 361 ILLKTGYKDEEGAENELSFQEWTQQVQ----DM---LNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS---GTVFVRR 430 (497)
Q Consensus 361 ~~~~~g~~~~~~~~~e~a~~~~~~~~~----~~---~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~---~~~~~~~ 430 (497)
.++..|..+...|++++|+..|+++++ +. ..++.+|.+++..|+|++|+..|+++++ .+|++ +.+++++
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~-~~p~~~~~~~~~~~l 82 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVS-RYPTHDKAAGGLLKL 82 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHH-HCCCCcccHHHHHHH
Confidence 456778888999999999999999883 23 7899999999999999999999999999 99999 8999999
Q ss_pred HHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCC
Q 010932 431 ALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGM 473 (497)
Q Consensus 431 g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~ 473 (497)
|.++..+|++++|+..|+++++..|+++.+...+..+-...++
T Consensus 83 a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l~~~ 125 (129)
T 2xev_A 83 GLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSIRLG 125 (129)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHC--
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999998887766665544443
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.4e-12 Score=127.61 Aligned_cols=126 Identities=13% Similarity=0.036 Sum_probs=113.5
Q ss_pred HHHHhccccccccchhhhhhHHHHHH----------HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCC-------Cc
Q 010932 361 ILLKTGYKDEEGAENELSFQEWTQQV----------QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSV-------PS 423 (497)
Q Consensus 361 ~~~~~g~~~~~~~~~e~a~~~~~~~~----------~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p-------~~ 423 (497)
.++..|..+...|+++.|+..|++++ ..+..++..|..++..|++++|+.+|.+|++ +.+ ..
T Consensus 105 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~-~~~~~~~~~~~~ 183 (383)
T 3ulq_A 105 FNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYE-IYKEHEAYNIRL 183 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHHTCSTTHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-HHHhCccchHHH
Confidence 44558999999999999999999987 3678999999999999999999999999998 633 33
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCCh------HHHHHHHHHHHHCCChHHHHHHHHHhhcC
Q 010932 424 GTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWP------TAFYMQALALNKLGMETDAQDMLNDGASF 487 (497)
Q Consensus 424 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~------~a~~~~g~~~~~~~~~~~A~~~~~~a~~l 487 (497)
+.++.++|.+|..+|+|++|+..|++|+++.+... .+++++|.+|..+|++++|+.+|++|+++
T Consensus 184 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 253 (383)
T 3ulq_A 184 LQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAV 253 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 56999999999999999999999999999966543 69999999999999999999999999985
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=9.7e-12 Score=119.30 Aligned_cols=124 Identities=7% Similarity=-0.013 Sum_probs=115.5
Q ss_pred ccch-hhhhhHHHHHH----HHHHHHHHHHhHHhhccc----------HHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHh
Q 010932 372 GAEN-ELSFQEWTQQV----QDMLNTKKFGDIAFRDKD----------FKNAIEYYSKLVSMMSVPSGTVFVRRALSYLM 436 (497)
Q Consensus 372 ~~~~-e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~----------~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~ 436 (497)
.+.+ ++|++.+++++ ++..+|+.++.++...+. +++++..+++++. .+|.++.+|++|+.++..
T Consensus 42 ~~e~s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~-~~PKny~aW~hR~wlL~~ 120 (331)
T 3dss_A 42 AGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLR-VNPKSYGTWHHRCWLLSR 120 (331)
T ss_dssp TTCCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHhc
Confidence 3444 57899999988 788999999999988876 7999999999999 999999999999999999
Q ss_pred hhc--HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCC-hHHHHHHHHHhhcCccccccCCC
Q 010932 437 IEQ--AELALRDAMQAQVCLPEWPTAFYMQALALNKLGM-ETDAQDMLNDGASFEAKKQNSWR 496 (497)
Q Consensus 437 ~~~--~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~-~~~A~~~~~~a~~l~~~~~~~~~ 496 (497)
+++ +++++..++++++++|.|..||++++.++..+|. +++++++++++++++|.+..+|+
T Consensus 121 l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~ 183 (331)
T 3dss_A 121 LPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWH 183 (331)
T ss_dssp CSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHH
T ss_pred cCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHH
Confidence 995 9999999999999999999999999999999999 59999999999999999999996
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=99.29 E-value=4.7e-12 Score=103.99 Aligned_cols=114 Identities=12% Similarity=0.091 Sum_probs=104.2
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc-------HHH
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS-------GTV 426 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~-------~~~ 426 (497)
....+...|..+...++++.|+..|++++ .++..++..|..++..|+|++|+..|++++. +.|++ +.+
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~~~~~ 81 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIE-VGRENREDYRQIAKA 81 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HHHHSTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHh-hccccchhHHHHHHH
Confidence 45678889999999999999999999988 4678899999999999999999999999999 88877 899
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCC
Q 010932 427 FVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGM 473 (497)
Q Consensus 427 ~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~ 473 (497)
|+++|.++..+|++++|+..|+++++++| ++..+..++.++..+++
T Consensus 82 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 82 YARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKE 127 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 68999999988776654
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.1e-12 Score=115.10 Aligned_cols=100 Identities=8% Similarity=0.018 Sum_probs=89.4
Q ss_pred HHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHH-HHHCCC
Q 010932 395 FGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALA-LNKLGM 473 (497)
Q Consensus 395 ~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~-~~~~~~ 473 (497)
.+..+...|+|++|+..|+++++ .+|+++.+|+.+|.+|..+|++++|+..|+++++++|+++.+++.+|.+ +...|+
T Consensus 16 ~~~~~~~~~~~~~A~~~~~~al~-~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~ 94 (177)
T 2e2e_A 16 PLHQFASQQNPEAQLQALQDKIR-ANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQ 94 (177)
T ss_dssp TTCCCC-----CCCCHHHHHHHH-HCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTT
T ss_pred hhhhhhhccCHHHHHHHHHHHHH-hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCC
Confidence 34556788999999999999999 9999999999999999999999999999999999999999999999999 889999
Q ss_pred h--HHHHHHHHHhhcCccccccCC
Q 010932 474 E--TDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 474 ~--~~A~~~~~~a~~l~~~~~~~~ 495 (497)
+ ++|+..|+++++++|++..+|
T Consensus 95 ~~~~~A~~~~~~al~~~p~~~~~~ 118 (177)
T 2e2e_A 95 HMTAQTRAMIDKALALDSNEITAL 118 (177)
T ss_dssp CCCHHHHHHHHHHHHHCTTCHHHH
T ss_pred cchHHHHHHHHHHHHhCCCcHHHH
Confidence 9 999999999999999887665
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.28 E-value=3.9e-12 Score=118.71 Aligned_cols=135 Identities=10% Similarity=-0.037 Sum_probs=116.8
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCC-CCc-HHHHHHHH
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMS-VPS-GTVFVRRA 431 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~-p~~-~~~~~~~g 431 (497)
-.+.....+..+...|++++|.+.|+..+ .+. ..+.+|..+++.|+|++|+..|++++. .. |.. ..+++++|
T Consensus 101 r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~-~~d~~~~~~a~~~LG 178 (282)
T 4f3v_A 101 PLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGK-WPDKFLAGAAGVAHG 178 (282)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGG-CSCHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhc-cCCcccHHHHHHHHH
Confidence 34555666777888899999999998876 556 899999999999999999999999988 53 322 45899999
Q ss_pred HHHHhhhcHHHHHHHHHHHHHhC--CC-ChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 432 LSYLMIEQAELALRDAMQAQVCL--PE-WPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 432 ~~~~~~~~~~~A~~~~~~al~l~--p~-~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
.++..+|++++|+..|++++.-. |. .+++++++|.++.++|+.++|...|++++..+|+ ..+|
T Consensus 179 ~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~ 244 (282)
T 4f3v_A 179 VAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVA 244 (282)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHH
T ss_pred HHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHH
Confidence 99999999999999999998654 66 6789999999999999999999999999999998 5543
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.28 E-value=2e-11 Score=110.64 Aligned_cols=127 Identities=11% Similarity=-0.031 Sum_probs=118.0
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHH--HHHHHHHHHHhHHhhcc----cHHHHHHHHHHHhhcCCCCcHHHHHHH
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQV--QDMLNTKKFGDIAFRDK----DFKNAIEYYSKLVSMMSVPSGTVFVRR 430 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~--~~~~~~~~~g~~~~~~~----~~~~Ai~~~~~ai~~~~p~~~~~~~~~ 430 (497)
...+.++.+|..+...+++++|+..|++++ .++.+++++|..+.. + ++++|+..|++|++ +.++.+++++
T Consensus 16 g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~---~g~~~a~~~L 91 (212)
T 3rjv_A 16 GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIR-NPQQADYPQARQLAEKAVE---AGSKSGEIVL 91 (212)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH---TTCHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH---CCCHHHHHHH
Confidence 345778888999999999999999999988 578999999999998 7 99999999999998 5789999999
Q ss_pred HHHHHh----hhcHHHHHHHHHHHHHhCC--CChHHHHHHHHHHHH----CCChHHHHHHHHHhhcC
Q 010932 431 ALSYLM----IEQAELALRDAMQAQVCLP--EWPTAFYMQALALNK----LGMETDAQDMLNDGASF 487 (497)
Q Consensus 431 g~~~~~----~~~~~~A~~~~~~al~l~p--~~~~a~~~~g~~~~~----~~~~~~A~~~~~~a~~l 487 (497)
|.+|.. .+++++|+..|++|++..| +++.+++++|.+|.. .+++++|+..|++|+++
T Consensus 92 g~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 92 ARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 999998 8999999999999999999 469999999999999 99999999999999988
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.27 E-value=7.1e-12 Score=111.86 Aligned_cols=134 Identities=10% Similarity=-0.037 Sum_probs=116.0
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHHH----------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcC---CC---
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQVQ----------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMM---SV--- 421 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~----------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~---~p--- 421 (497)
....+...|..+...|+++.|+..|++++. .+..+.+.|..+...|++++|+..|.++++ + .+
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~-~~~~~~~~~ 103 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERE-LLASLPEDP 103 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHHHSCCCH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-HHHHcCccH
Confidence 456788899999999999999999999883 567889999999999999999999999999 6 33
Q ss_pred -CcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCC--C----hHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccc
Q 010932 422 -PSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPE--W----PTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQ 492 (497)
Q Consensus 422 -~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~--~----~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~ 492 (497)
....+++++|.++..+|++++|+..+++++++.+. + ..++.++|.++..+|++++|+.+|++|+++-.+..
T Consensus 104 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 181 (203)
T 3gw4_A 104 LAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELE 181 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcC
Confidence 33678999999999999999999999999987432 2 34578999999999999999999999998765443
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.27 E-value=8.6e-12 Score=116.73 Aligned_cols=126 Identities=13% Similarity=0.117 Sum_probs=97.0
Q ss_pred CCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCc--ceeeeeeeeeCCceEEEEEcCCCCChhhh
Q 010932 71 GDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKR--LVNLIGCCAEGDERLLVAQYMPNDTLSKH 148 (497)
Q Consensus 71 g~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 148 (497)
+.|..+.||++...+|..+++|+.... ....+.+|+.+++.+.+.+ +.+++++...++..++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 466679999998777888999997654 2356889999999886444 566888888777889999999998884
Q ss_pred hhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC------------------------------------------------
Q 010932 149 LFHWDKQPLPWEMRVRVAYYIAQALDHCNSQN------------------------------------------------ 180 (497)
Q Consensus 149 l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~------------------------------------------------ 180 (497)
... .+ ...++.+++..|..||+..
T Consensus 104 ~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (264)
T 1nd4_A 104 SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK 175 (264)
T ss_dssp TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHH
Confidence 211 12 2356777888888888643
Q ss_pred ---------CcccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 181 ---------RKLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 181 ---------~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
.++|+|++|.|||++.++.+.|+||+.+.
T Consensus 176 ~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 176 ARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 18999999999999877667799999865
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=99.25 E-value=1.9e-11 Score=116.51 Aligned_cols=132 Identities=9% Similarity=-0.064 Sum_probs=109.0
Q ss_pred HHHHHhccccccccchhhhhhHHHHHHH------H----HHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc------
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQVQ------D----MLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS------ 423 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~~------~----~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~------ 423 (497)
..+......+...++++.|+..++++++ + ...++..|..+...|+|++|+.+|++|++ +.+..
T Consensus 76 ~~l~~~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~-~~~~~~~~~~~ 154 (293)
T 3u3w_A 76 KQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLN-QQLTGIDVYQN 154 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH-TCCCCSCTTHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHH-HhcccccHHHH
Confidence 3444555667778999999999999771 1 33445689999999999999999999998 64443
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHHh-------CCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccc
Q 010932 424 GTVFVRRALSYLMIEQAELALRDAMQAQVC-------LPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQ 492 (497)
Q Consensus 424 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~l-------~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~ 492 (497)
..++.++|.+|..+|+|++|+..|++|+++ .+....+++++|.+|..+|+|++|++++++|+++.++..
T Consensus 155 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~ 230 (293)
T 3u3w_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRIN 230 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcC
Confidence 347999999999999999999999999953 233467999999999999999999999999999876653
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.6e-11 Score=121.54 Aligned_cols=127 Identities=11% Similarity=0.011 Sum_probs=113.1
Q ss_pred HHHHHhccccccccchhhhhhHHHHHH----------HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCC-------C
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQV----------QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSV-------P 422 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~----------~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p-------~ 422 (497)
..++..|..+...|+++.|+..|.+++ ..+..++..|..++..|++++|+.+|.+|++ +.+ .
T Consensus 102 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~-~~~~~~~~~~~ 180 (378)
T 3q15_A 102 YSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALD-IYQNHPLYSIR 180 (378)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHHTSTTCHHH
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH-HHHhCCCchhh
Confidence 356778999999999999999999987 4688999999999999999999999999998 533 2
Q ss_pred cHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCC------ChHHHHHHHHHHHHCCChHHHHHHHHHhhcC
Q 010932 423 SGTVFVRRALSYLMIEQAELALRDAMQAQVCLPE------WPTAFYMQALALNKLGMETDAQDMLNDGASF 487 (497)
Q Consensus 423 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~------~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l 487 (497)
.+.++.++|.+|..+|+|++|+..|++|+++.+. ...+++++|.+|..+|++++|+.+|++|+++
T Consensus 181 ~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~ 251 (378)
T 3q15_A 181 TIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKV 251 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3668999999999999999999999999998432 3578999999999999999999999999983
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.23 E-value=4.2e-11 Score=121.78 Aligned_cols=123 Identities=14% Similarity=0.003 Sum_probs=91.2
Q ss_pred ccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhh------
Q 010932 368 KDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMI------ 437 (497)
Q Consensus 368 ~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~------ 437 (497)
.....+.+++|++.+++++ ..+..+..+|..+...|++++|+..|++|++ ++|+++.+|+++|.+|...
T Consensus 222 ~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~-~~p~~~~~~~~lg~~y~~~~~~~~~ 300 (472)
T 4g1t_A 222 MREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALE-YIPNNAYLHCQIGCCYRAKVFQVMN 300 (472)
T ss_dssp CC------CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HSTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchHHHHHHHHHHHH-hCCChHHHHHHHHHHHHHHHHHhhh
Confidence 3445566777888887776 4567777888888888888888888888888 8888888888888877543
Q ss_pred -------------hcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccc
Q 010932 438 -------------EQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKK 491 (497)
Q Consensus 438 -------------~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~ 491 (497)
+.+++|+..|+++++++|++..+++++|.++..+|++++|+++|++|++++++.
T Consensus 301 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~ 367 (472)
T 4g1t_A 301 LRENGMYGKRKLLELIGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTP 367 (472)
T ss_dssp C------CHHHHHHHHHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCC
Confidence 446778888888888888888888888888888888888888888888776654
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.22 E-value=5.5e-11 Score=116.94 Aligned_cols=145 Identities=9% Similarity=0.149 Sum_probs=109.0
Q ss_pred CCcccccccCCCCCCcEEEEEEEcCCcEEEEEEcc--CCCC-CChhHHHHHHHHhccCC--CCcceeeeeeeeeC---Cc
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFS--RQSW-PDPHQFVTEAAGLGNVR--HKRLVNLIGCCAEG---DE 132 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~--~~~~-~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~---~~ 132 (497)
+.....+..++.|.++.||+.... +..+++|+.. .... .....+.+|+.+++.+. +..+++++.++.+. +.
T Consensus 37 ~~~~~~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~ 115 (359)
T 3dxp_A 37 FAGPLSVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGR 115 (359)
T ss_dssp CCCCCEEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSS
T ss_pred CCCCceEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCC
Confidence 344445677899999999999875 4678889876 3321 22456889999999886 45578888888776 34
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---------------------------------
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQ--------------------------------- 179 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~--------------------------------- 179 (497)
.++||||++|.++.+.. ...++...+..++.+++..|..||..
T Consensus 116 ~~~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (359)
T 3dxp_A 116 AFYIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSET 191 (359)
T ss_dssp CEEEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCC
T ss_pred eEEEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCC
Confidence 79999999998875432 24578888999999999999999972
Q ss_pred ------------------------CCcccccCCCcceEeCCCCC--eeEcccCCccc
Q 010932 180 ------------------------NRKLYHDLNAYRVLFDEDGD--PRLSSFGLMKN 210 (497)
Q Consensus 180 ------------------------~~iiH~Dlkp~Nill~~~~~--~kl~Dfgla~~ 210 (497)
..++|+|++|.|||++.++. +.|+||+.+..
T Consensus 192 ~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 192 ESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp SCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred cCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 23899999999999997753 68999998763
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.8e-11 Score=121.39 Aligned_cols=134 Identities=11% Similarity=0.092 Sum_probs=115.8
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHHH----------HHHHHHHHHhHHhhccc--------------------HH
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQVQ----------DMLNTKKFGDIAFRDKD--------------------FK 406 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~----------~~~~~~~~g~~~~~~~~--------------------~~ 406 (497)
.....+...|..+...|++++|+..+.++++ .+..+..+|..+...|+ |+
T Consensus 85 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~ 164 (406)
T 3sf4_A 85 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQ 164 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHH
Confidence 4567788889999999999999999999872 25588899999999999 99
Q ss_pred HHHHHHHHHhhcC------CCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChH------HHHHHHHHHHHCCCh
Q 010932 407 NAIEYYSKLVSMM------SVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPT------AFYMQALALNKLGME 474 (497)
Q Consensus 407 ~Ai~~~~~ai~~~------~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~------a~~~~g~~~~~~~~~ 474 (497)
+|+..|.++++ + .|..+.++.++|.++..+|++++|+..+++++++.|+... +++++|.+|..+|++
T Consensus 165 ~A~~~~~~al~-~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 243 (406)
T 3sf4_A 165 AAVDFYEENLS-LVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEF 243 (406)
T ss_dssp HHHHHHHHHHH-HHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHH-HHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCh
Confidence 99999999987 5 4445678999999999999999999999999998776644 999999999999999
Q ss_pred HHHHHHHHHhhcCcccc
Q 010932 475 TDAQDMLNDGASFEAKK 491 (497)
Q Consensus 475 ~~A~~~~~~a~~l~~~~ 491 (497)
++|+..|++|+++.++.
T Consensus 244 ~~A~~~~~~al~~~~~~ 260 (406)
T 3sf4_A 244 ETASEYYKKTLLLARQL 260 (406)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 99999999999887654
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.20 E-value=2.9e-11 Score=119.93 Aligned_cols=133 Identities=14% Similarity=0.114 Sum_probs=119.3
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHHH----------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc---
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQVQ----------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS--- 423 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~----------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~--- 423 (497)
.....+...|..+...|++++|+..|+++++ .+..+..+|.+++..|++++|+..|+++++ +.+..
T Consensus 185 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~-~~~~~~~~ 263 (406)
T 3sf4_A 185 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLL-LARQLKDR 263 (406)
T ss_dssp HHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHHHTTCH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH-HHHhCcCc
Confidence 4556788899999999999999999999882 234889999999999999999999999998 76665
Q ss_pred ---HHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCC------hHHHHHHHHHHHHCCChHHHHHHHHHhhcCccc
Q 010932 424 ---GTVFVRRALSYLMIEQAELALRDAMQAQVCLPEW------PTAFYMQALALNKLGMETDAQDMLNDGASFEAK 490 (497)
Q Consensus 424 ---~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~------~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~ 490 (497)
+.++.++|.++..+|++++|+..|++++++.+.. ..++..+|.+|..+|++++|+.+|++|+++.+.
T Consensus 264 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 339 (406)
T 3sf4_A 264 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 339 (406)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999996655 789999999999999999999999999988544
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.19 E-value=4.1e-11 Score=115.06 Aligned_cols=134 Identities=14% Similarity=0.109 Sum_probs=116.5
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHHH----------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc---
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQVQ----------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS--- 423 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~----------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~--- 423 (497)
.....+...|..+...|++++|+..++++++ .+..+...|..+...|++++|+..|+++++ +.+..
T Consensus 181 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~-~~~~~~~~ 259 (338)
T 3ro2_A 181 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLL-LARQLKDR 259 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HHHHTTCH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-HHHhhcch
Confidence 4456788889999999999999999999882 234889999999999999999999999998 76555
Q ss_pred ---HHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCC------hHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccc
Q 010932 424 ---GTVFVRRALSYLMIEQAELALRDAMQAQVCLPEW------PTAFYMQALALNKLGMETDAQDMLNDGASFEAKK 491 (497)
Q Consensus 424 ---~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~------~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~ 491 (497)
..++.++|.++..+|++++|+..+++++++.+.. ..+++.+|.+|..+|++++|..+|++|+++.++.
T Consensus 260 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 336 (338)
T 3ro2_A 260 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREV 336 (338)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC----
T ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhh
Confidence 7899999999999999999999999999986654 5699999999999999999999999999987653
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.19 E-value=2.1e-11 Score=121.58 Aligned_cols=130 Identities=14% Similarity=0.076 Sum_probs=75.1
Q ss_pred HHHHHHhccccccccc-----------------hhhhhhHHHHHHH----------HHHHHHHHHhHHhhcccHHHHHHH
Q 010932 359 HDILLKTGYKDEEGAE-----------------NELSFQEWTQQVQ----------DMLNTKKFGDIAFRDKDFKNAIEY 411 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~-----------------~e~a~~~~~~~~~----------~~~~~~~~g~~~~~~~~~~~Ai~~ 411 (497)
...+...|..+...|+ ++.|+..|.++++ .+..+..+|..++..|+|++|+..
T Consensus 166 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 245 (411)
T 4a1s_A 166 GRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEH 245 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHH
Confidence 3445555555555565 5555555555442 233555666666666666666666
Q ss_pred HHHHhhcCCCCcHH------HHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCC------hHHHHHHHHHHHHCCChHHHHH
Q 010932 412 YSKLVSMMSVPSGT------VFVRRALSYLMIEQAELALRDAMQAQVCLPEW------PTAFYMQALALNKLGMETDAQD 479 (497)
Q Consensus 412 ~~~ai~~~~p~~~~------~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~------~~a~~~~g~~~~~~~~~~~A~~ 479 (497)
|+++++ +.+.... +++++|.+|..+|++++|+..|++++++.|+. ..+++.+|.+|..+|++++|+.
T Consensus 246 ~~~al~-~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 324 (411)
T 4a1s_A 246 HQERLR-IAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIE 324 (411)
T ss_dssp HHHHHH-HHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHH-HHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 666665 4443322 56666666666666666666666666665543 4556666666666666666666
Q ss_pred HHHHhhcCcc
Q 010932 480 MLNDGASFEA 489 (497)
Q Consensus 480 ~~~~a~~l~~ 489 (497)
+|++|+++.+
T Consensus 325 ~~~~al~~~~ 334 (411)
T 4a1s_A 325 YHNRHLAIAQ 334 (411)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666665543
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=99.19 E-value=5.2e-11 Score=96.21 Aligned_cols=96 Identities=8% Similarity=0.014 Sum_probs=83.5
Q ss_pred hhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHH
Q 010932 376 ELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQ 451 (497)
Q Consensus 376 e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al 451 (497)
+.++..|++++ .++..++.+|..++..|++++|+..|+++++ ++|+++.+|+++|.+|..+|++++|+..|++++
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~-~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALD-FDPTYSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHH-HCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 46777888877 5788999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HhCCCC--hHHHHHHHHHHHHCC
Q 010932 452 VCLPEW--PTAFYMQALALNKLG 472 (497)
Q Consensus 452 ~l~p~~--~~a~~~~g~~~~~~~ 472 (497)
+++|+. ..+...+...+..++
T Consensus 81 ~~~~~~~~~~~~~~l~~~l~~l~ 103 (115)
T 2kat_A 81 AAAQSRGDQQVVKELQVFLRRLA 103 (115)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HhccccccHHHHHHHHHHHHHhc
Confidence 999854 455555555555544
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.17 E-value=2.1e-11 Score=121.58 Aligned_cols=133 Identities=11% Similarity=0.044 Sum_probs=120.5
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHHH--------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcC------CCC
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQVQ--------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMM------SVP 422 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~--------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~------~p~ 422 (497)
.....+...|..+...|++++|+..|+++++ .+..++.+|..++..|++++|+..|+++++ + .|.
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~-~~~~~~~~~~ 124 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLT-LAKSMNDRLG 124 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HHHHccCchH
Confidence 4456777899999999999999999999882 246889999999999999999999999998 6 577
Q ss_pred cHHHHHHHHHHHHhhhcHHHHHHHHHHHHHh------CCCChHHHHHHHHHHHHCCC-----------------hHHHHH
Q 010932 423 SGTVFVRRALSYLMIEQAELALRDAMQAQVC------LPEWPTAFYMQALALNKLGM-----------------ETDAQD 479 (497)
Q Consensus 423 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l------~p~~~~a~~~~g~~~~~~~~-----------------~~~A~~ 479 (497)
.+.+|+++|.+|..+|++++|+..|++++++ .|....+++++|.+|..+|+ +++|++
T Consensus 125 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~ 204 (411)
T 4a1s_A 125 EAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVE 204 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHH
Confidence 7899999999999999999999999999999 67788999999999999999 999999
Q ss_pred HHHHhhcCccc
Q 010932 480 MLNDGASFEAK 490 (497)
Q Consensus 480 ~~~~a~~l~~~ 490 (497)
.|++|+++.+.
T Consensus 205 ~~~~al~~~~~ 215 (411)
T 4a1s_A 205 FYQENLKLMRD 215 (411)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999887543
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.16 E-value=7.5e-11 Score=94.09 Aligned_cols=69 Identities=22% Similarity=0.154 Sum_probs=67.3
Q ss_pred cHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccc
Q 010932 423 SGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKK 491 (497)
Q Consensus 423 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~ 491 (497)
++.+|+++|.+++.+|+|++|+..|++|++++|+++.+|+++|.++..+|++++|+++|++|++++|++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 478999999999999999999999999999999999999999999999999999999999999999987
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.16 E-value=3.4e-11 Score=95.88 Aligned_cols=98 Identities=10% Similarity=0.111 Sum_probs=90.7
Q ss_pred HHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCC--cHHHHHHHHHH
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVP--SGTVFVRRALS 433 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~--~~~~~~~~g~~ 433 (497)
..+...|..+...+++++|+..|++++ .+...++.+|..++..|+|++|+..|+++++ ++|+ +..+|+++|.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~l~~~ 85 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVIN-VIEDEYNKDVWAAKADA 85 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-TSCCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH-hCcccchHHHHHHHHHH
Confidence 345667888888999999999999988 4678899999999999999999999999999 9999 99999999999
Q ss_pred HHhh-hcHHHHHHHHHHHHHhCCCCh
Q 010932 434 YLMI-EQAELALRDAMQAQVCLPEWP 458 (497)
Q Consensus 434 ~~~~-~~~~~A~~~~~~al~l~p~~~ 458 (497)
+..+ |++++|+..+++++...|..+
T Consensus 86 ~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 86 LRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 9999 999999999999999999863
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=99.14 E-value=9.4e-11 Score=92.31 Aligned_cols=85 Identities=12% Similarity=0.050 Sum_probs=73.7
Q ss_pred HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCC--hHHHHHHH
Q 010932 388 DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEW--PTAFYMQA 465 (497)
Q Consensus 388 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~g 465 (497)
++..++.+|.+++..|+|++|+..|+++++ ++|+++.+|+++|.+|..+|++++|+..|++++++.|+. ..+...+.
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~-~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l~ 84 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVE-TDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSELQ 84 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHHH
Confidence 567899999999999999999999999999 999999999999999999999999999999999998754 44445555
Q ss_pred HHHHHCCC
Q 010932 466 LALNKLGM 473 (497)
Q Consensus 466 ~~~~~~~~ 473 (497)
.++...+.
T Consensus 85 ~~l~~~~~ 92 (100)
T 3ma5_A 85 DAKLKAEG 92 (100)
T ss_dssp HHHHHHHT
T ss_pred HHHHHccc
Confidence 55554443
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.13 E-value=5.9e-11 Score=113.91 Aligned_cols=134 Identities=9% Similarity=0.064 Sum_probs=116.8
Q ss_pred HHHHHHHHhccccccccc--------------------hhhhhhHHHHHH----------HHHHHHHHHHhHHhhcccHH
Q 010932 357 AVHDILLKTGYKDEEGAE--------------------NELSFQEWTQQV----------QDMLNTKKFGDIAFRDKDFK 406 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~--------------------~e~a~~~~~~~~----------~~~~~~~~~g~~~~~~~~~~ 406 (497)
.....+...|..+...|+ ++.|+..+++++ ..+..+...|..++..|+++
T Consensus 121 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 200 (338)
T 3ro2_A 121 GEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFR 200 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Confidence 345677788888888888 889998888876 23567889999999999999
Q ss_pred HHHHHHHHHhhcCCCCc------HHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCC------hHHHHHHHHHHHHCCCh
Q 010932 407 NAIEYYSKLVSMMSVPS------GTVFVRRALSYLMIEQAELALRDAMQAQVCLPEW------PTAFYMQALALNKLGME 474 (497)
Q Consensus 407 ~Ai~~~~~ai~~~~p~~------~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~------~~a~~~~g~~~~~~~~~ 474 (497)
+|+..|+++++ +.+.. ..+++++|.++..+|++++|+..+++++++.++. ..+++.+|.++..+|++
T Consensus 201 ~A~~~~~~a~~-~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 279 (338)
T 3ro2_A 201 DAVIAHEQRLL-IAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDY 279 (338)
T ss_dssp HHHHHHHHHHH-HHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHH-HHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCH
Confidence 99999999998 65443 3499999999999999999999999999998776 88999999999999999
Q ss_pred HHHHHHHHHhhcCcccc
Q 010932 475 TDAQDMLNDGASFEAKK 491 (497)
Q Consensus 475 ~~A~~~~~~a~~l~~~~ 491 (497)
++|+..|++|+++.+..
T Consensus 280 ~~A~~~~~~a~~~~~~~ 296 (338)
T 3ro2_A 280 EKAIDYHLKHLAIAQEL 296 (338)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999886654
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.13 E-value=8.6e-11 Score=90.10 Aligned_cols=75 Identities=15% Similarity=0.100 Sum_probs=70.8
Q ss_pred CCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 421 VPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 421 p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
|.++.+|+++|.++...|++++|+..|+++++++|+++.+++++|.++..+|++++|+..|+++++++|++..+|
T Consensus 6 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 80 (91)
T 1na3_A 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAK 80 (91)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred cccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHH
Confidence 346889999999999999999999999999999999999999999999999999999999999999999877654
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.7e-10 Score=102.72 Aligned_cols=121 Identities=12% Similarity=0.050 Sum_probs=98.7
Q ss_pred ccccchhhhhh---HHHHHH-HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhc-----CCCCcHHHHHHHHHHHHhhhcH
Q 010932 370 EEGAENELSFQ---EWTQQV-QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSM-----MSVPSGTVFVRRALSYLMIEQA 440 (497)
Q Consensus 370 ~~~~~~e~a~~---~~~~~~-~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~-----~~p~~~~~~~~~g~~~~~~~~~ 440 (497)
...|++++|.+ .+...- ..+..+...|..+...|+|++|+..|+++++. ..+..+.++.++|.++..+|++
T Consensus 3 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 82 (203)
T 3gw4_A 3 FEAHDYALAERQAQALLAHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNW 82 (203)
T ss_dssp ----CHHHHHHHHHHHHTSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred cccccHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCH
Confidence 34677777777 333222 56788999999999999999999999999982 1234477899999999999999
Q ss_pred HHHHHHHHHHHHh---CC----CChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccc
Q 010932 441 ELALRDAMQAQVC---LP----EWPTAFYMQALALNKLGMETDAQDMLNDGASFEAK 490 (497)
Q Consensus 441 ~~A~~~~~~al~l---~p----~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~ 490 (497)
++|+..+++++++ .+ ....+++++|.++..+|++++|+..|++|+++...
T Consensus 83 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 139 (203)
T 3gw4_A 83 DAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQ 139 (203)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999 44 33678999999999999999999999999977543
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.05 E-value=3.3e-10 Score=96.32 Aligned_cols=103 Identities=10% Similarity=0.066 Sum_probs=91.5
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc------HHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCC---
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS------GTVFVRRALSYLMIEQAELALRDAMQAQVCLPEW--- 457 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~------~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~--- 457 (497)
..+..+..+|..++..|++++|+..|+++++ +.+.. ..++.++|.++..+|++++|+..+++++++.+..
T Consensus 7 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~-~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 85 (164)
T 3ro3_A 7 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLL-IAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 85 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH-HHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Confidence 3466889999999999999999999999998 65443 2589999999999999999999999999987654
Q ss_pred ---hHHHHHHHHHHHHCCChHHHHHHHHHhhcCccc
Q 010932 458 ---PTAFYMQALALNKLGMETDAQDMLNDGASFEAK 490 (497)
Q Consensus 458 ---~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~ 490 (497)
..+++++|.++..+|++++|++.|++|+++.++
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 121 (164)
T 3ro3_A 86 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 121 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 678999999999999999999999999987543
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=99.04 E-value=1.1e-09 Score=91.80 Aligned_cols=110 Identities=11% Similarity=0.057 Sum_probs=99.5
Q ss_pred cchhhhhhHHHHHH--HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHh----hhcHHHHHHH
Q 010932 373 AENELSFQEWTQQV--QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLM----IEQAELALRD 446 (497)
Q Consensus 373 ~~~e~a~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~----~~~~~~A~~~ 446 (497)
.++++|+..|+++. .++.+. +|..+...+.+++|+..|++|++ . .++.+++++|.+|.. .+++++|+..
T Consensus 9 ~d~~~A~~~~~~aa~~g~~~a~--lg~~y~~g~~~~~A~~~~~~Aa~-~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~ 83 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEMFGC--LSLVSNSQINKQKLFQYLSKACE-L--NSGNGCRFLGDFYENGKYVKKDLRKAAQY 83 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCTTHH--HHHHTCTTSCHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHCSSSCCCHHHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCHhhh--HHHHHHcCCCHHHHHHHHHHHHc-C--CCHHHHHHHHHHHHcCCCCCccHHHHHHH
Confidence 45788999999887 345555 99999999999999999999999 5 679999999999999 8999999999
Q ss_pred HHHHHHhCCCChHHHHHHHHHHHH----CCChHHHHHHHHHhhcCcc
Q 010932 447 AMQAQVCLPEWPTAFYMQALALNK----LGMETDAQDMLNDGASFEA 489 (497)
Q Consensus 447 ~~~al~l~p~~~~a~~~~g~~~~~----~~~~~~A~~~~~~a~~l~~ 489 (497)
|++|.+. .++.+++++|.+|.. .+++++|++.|++|.++..
T Consensus 84 ~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~ 128 (138)
T 1klx_A 84 YSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGS 128 (138)
T ss_dssp HHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCCC
Confidence 9999987 789999999999999 9999999999999998754
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.03 E-value=3.2e-10 Score=88.67 Aligned_cols=69 Identities=16% Similarity=0.103 Sum_probs=66.0
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChH-HHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 427 FVRRALSYLMIEQAELALRDAMQAQVCLPEWPT-AFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 427 ~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~-a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
.+++|.+++..|++++|+..|+++++++|+++. +|+++|.+|..+|++++|+++|++|++++|++..+|
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 478999999999999999999999999999999 999999999999999999999999999999987765
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.02 E-value=6.7e-10 Score=115.10 Aligned_cols=129 Identities=13% Similarity=0.102 Sum_probs=72.2
Q ss_pred HHHHHhccccccccchhhhhhHHHHHHH----H-HHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHH-
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQVQ----D-MLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALS- 433 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~~----~-~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~- 433 (497)
..+...|..+...|+++.|.+.|+++++ + ...|...|..+.+.|++++|+..|++|++ ..|.++..|...+..
T Consensus 322 ~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~-~~~~~~~~~~~~a~~~ 400 (530)
T 2ooe_A 322 LLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARE-DARTRHHVYVTAALME 400 (530)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CTTCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHh-ccCCchHHHHHHHHHH
Confidence 3344444444445555555555555551 1 23555555555555555555555555555 555555555544433
Q ss_pred HHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcc
Q 010932 434 YLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEA 489 (497)
Q Consensus 434 ~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~ 489 (497)
+..+|++++|...|+++++++|+++.+|..+|..+..+|++++|...|++|+...|
T Consensus 401 ~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~ 456 (530)
T 2ooe_A 401 YYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGS 456 (530)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHSCC
T ss_pred HHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhccC
Confidence 33456666666666666666666666666666666666666666666666665543
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=99.02 E-value=4.6e-11 Score=114.63 Aligned_cols=181 Identities=14% Similarity=0.123 Sum_probs=120.9
Q ss_pred cccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCC-CCc--ceeeeeeeeeCC---ceEEEEEcC
Q 010932 67 VSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR-HKR--LVNLIGCCAEGD---ERLLVAQYM 140 (497)
Q Consensus 67 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~~~~~~~~~~---~~~lv~e~~ 140 (497)
+..++.|....||+.. ..+++|+.... .....+.+|+.+|+.+. +.. +..++....... ..++||+++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4457889999999763 45888986532 22467899999998873 333 344444443332 348999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-----------------------------------------
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQ----------------------------------------- 179 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~----------------------------------------- 179 (497)
+|.+|..... ..++...+..++.+++..|..||+.
T Consensus 99 ~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 99 KGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 9998875432 3567777888888888888888851
Q ss_pred ----------------CCcccccCCCcceEeCC--CCCeeEcccCCccccCCCCccccCCCC---CCcccccc-----CC
Q 010932 180 ----------------NRKLYHDLNAYRVLFDE--DGDPRLSSFGLMKNSRDGKSYSTNLAY---TPPEFLRT-----GR 233 (497)
Q Consensus 180 ----------------~~iiH~Dlkp~Nill~~--~~~~kl~Dfgla~~~~~~~~~~gt~~y---~aPE~~~~-----~~ 233 (497)
..++|+|++|.||+++. .+.+.|+||+.+..............+ ..|+.... +.
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 12699999999999997 456789999988754432222111111 23332211 11
Q ss_pred ---------CCcccceeehhhhHHHHhhCCCCC
Q 010932 234 ---------VIPESVIYSYGTVLLDLLSGKHIP 257 (497)
Q Consensus 234 ---------~~~~~Dv~slG~~l~elltg~~~~ 257 (497)
.....+.|++|.++|.+.+|..++
T Consensus 255 ~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 255 KDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 112257899999999999998654
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.2e-09 Score=84.53 Aligned_cols=71 Identities=13% Similarity=-0.106 Sum_probs=67.3
Q ss_pred CCCcHHHHHHHHHHHHhhhc---HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccc
Q 010932 420 SVPSGTVFVRRALSYLMIEQ---AELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAK 490 (497)
Q Consensus 420 ~p~~~~~~~~~g~~~~~~~~---~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~ 490 (497)
+|+++++++.+|.+++..++ .++|...+++|++++|+++.+++.+|.++++.|+|++|+.+|+++++.+|.
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 68999999999999987766 799999999999999999999999999999999999999999999999988
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.99 E-value=1.6e-09 Score=112.32 Aligned_cols=106 Identities=11% Similarity=0.003 Sum_probs=56.8
Q ss_pred HHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcH-HHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q 010932 389 MLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSG-TVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALA 467 (497)
Q Consensus 389 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~-~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 467 (497)
...|...|..+...|++++|...|+++++ ++|.++ .+|.++|.++.++|++++|+..|++|++..|.....+...+.+
T Consensus 321 ~~l~~~~~~~~~~~g~~~~A~~~~~~al~-~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~ 399 (530)
T 2ooe_A 321 MLLYFAYADYEESRMKYEKVHSIYNRLLA-IEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALM 399 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-SSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhC-ccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHH
Confidence 44555555555555555555555555555 555543 3555555555555555555555555555555555555444433
Q ss_pred -HHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 468 -LNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 468 -~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
+..+|++++|...|++|++++|++...|
T Consensus 400 ~~~~~~~~~~A~~~~e~al~~~p~~~~~~ 428 (530)
T 2ooe_A 400 EYYCSKDKSVAFKIFELGLKKYGDIPEYV 428 (530)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHcCChhHHHHHHHHHHHHCCCCHHHH
Confidence 2345555555555555555555554444
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.4e-09 Score=111.43 Aligned_cols=126 Identities=14% Similarity=0.066 Sum_probs=109.8
Q ss_pred HHHHHHhccccccc-----cchhhhhhHHHHHH--HHHHHHHHHHhHHhhcc---cHHHHHHHHHHHhhcCCCCcHHHHH
Q 010932 359 HDILLKTGYKDEEG-----AENELSFQEWTQQV--QDMLNTKKFGDIAFRDK---DFKNAIEYYSKLVSMMSVPSGTVFV 428 (497)
Q Consensus 359 ~~~~~~~g~~~~~~-----~~~e~a~~~~~~~~--~~~~~~~~~g~~~~~~~---~~~~Ai~~~~~ai~~~~p~~~~~~~ 428 (497)
.+....+|..+... +++++|+..|++++ .++.+++++|..++..| ++++|+..|++|++ . .++.+++
T Consensus 291 ~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~-~--~~~~a~~ 367 (490)
T 2xm6_A 291 SDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQGDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAA-K--GEKAAQF 367 (490)
T ss_dssp HHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHH-T--TCHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHH-C--CCHHHHH
Confidence 34556666666665 88999999999988 56788999999998866 89999999999999 5 6799999
Q ss_pred HHHHHHHh----hhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH----CCChHHHHHHHHHhhcCcc
Q 010932 429 RRALSYLM----IEQAELALRDAMQAQVCLPEWPTAFYMQALALNK----LGMETDAQDMLNDGASFEA 489 (497)
Q Consensus 429 ~~g~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~~~~~~A~~~~~~a~~l~~ 489 (497)
++|.+|.. .+++++|+..|++|++. .++.+++++|.+|.. .+++++|+..|++|++.++
T Consensus 368 ~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~ 434 (490)
T 2xm6_A 368 NLGNALLQGKGVKKDEQQAAIWMRKAAEQ--GLSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDM 434 (490)
T ss_dssp HHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 99999999 89999999999999986 468999999999999 8999999999999999884
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.97 E-value=2.1e-09 Score=105.72 Aligned_cols=130 Identities=15% Similarity=-0.007 Sum_probs=113.3
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHHH----------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCC--------
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQVQ----------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMS-------- 420 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~~----------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~-------- 420 (497)
...+...|..+...|+++.|...+++++. .+..+..+|..+...|+|++|+..|+++++ +.
T Consensus 53 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~-~~~~~~~~~~ 131 (373)
T 1hz4_A 53 IVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQ-LINEQHLEQL 131 (373)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHHHTTCTTS
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HHHHhccccC
Confidence 45677788888889999999999999873 234478899999999999999999999998 53
Q ss_pred CCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCC-----hHHHHHHHHHHHHCCChHHHHHHHHHhhcCcc
Q 010932 421 VPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEW-----PTAFYMQALALNKLGMETDAQDMLNDGASFEA 489 (497)
Q Consensus 421 p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~-----~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~ 489 (497)
|....++.++|.++..+|++++|+..+++++++.|.. ..+++.+|.++...|++++|...+++++.+.+
T Consensus 132 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~ 205 (373)
T 1hz4_A 132 PMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLG 205 (373)
T ss_dssp THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh
Confidence 4456788999999999999999999999999998763 57899999999999999999999999987743
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.94 E-value=1.4e-09 Score=110.65 Aligned_cols=125 Identities=12% Similarity=0.013 Sum_probs=107.3
Q ss_pred HHHhccccccccchhhhhhHHHHHH------------HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhc----CCCCc--
Q 010932 362 LLKTGYKDEEGAENELSFQEWTQQV------------QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSM----MSVPS-- 423 (497)
Q Consensus 362 ~~~~g~~~~~~~~~e~a~~~~~~~~------------~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~----~~p~~-- 423 (497)
..+....+..+|.+++|+..+++++ ..+..+.++|.+|..+|+|++|+.+|+++++. +.|++
T Consensus 312 ~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~ 391 (490)
T 3n71_A 312 TLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQ 391 (490)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHH
Confidence 3344455667899999999999988 46788999999999999999999999999972 35555
Q ss_pred -HHHHHHHHHHHHhhhcHHHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHHCCChHHHHHHHHHhhc
Q 010932 424 -GTVFVRRALSYLMIEQAELALRDAMQAQVC-----LPEW---PTAFYMQALALNKLGMETDAQDMLNDGAS 486 (497)
Q Consensus 424 -~~~~~~~g~~~~~~~~~~~A~~~~~~al~l-----~p~~---~~a~~~~g~~~~~~~~~~~A~~~~~~a~~ 486 (497)
+..++|+|.+|..+|+|++|+..|++|+++ .|+. .+..-+++.++.++++|++|...|++|.+
T Consensus 392 ~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~ 463 (490)
T 3n71_A 392 LGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMRE 463 (490)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567999999999999999999999999986 4555 56778999999999999999999998864
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.91 E-value=2.6e-09 Score=89.14 Aligned_cols=91 Identities=9% Similarity=-0.039 Sum_probs=62.5
Q ss_pred ccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHhC-C-CChHHHHHHHHHHHHCCChHHH
Q 010932 403 KDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIE---QAELALRDAMQAQVCL-P-EWPTAFYMQALALNKLGMETDA 477 (497)
Q Consensus 403 ~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~---~~~~A~~~~~~al~l~-p-~~~~a~~~~g~~~~~~~~~~~A 477 (497)
.....+.+.|.+++. .++.+.++.|++|.|+.+.+ +.++|+..++..++.+ | +..+++|++|.+++++|+|++|
T Consensus 12 ~~l~~~~~~y~~e~~-~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A 90 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKA-AGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKA 90 (152)
T ss_dssp HHHHHHHHHHHHHHH-TTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHHHc-cCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHH
Confidence 345566666666666 66666777777777777766 5667777777777776 5 4567777777777777777777
Q ss_pred HHHHHHhhcCccccccC
Q 010932 478 QDMLNDGASFEAKKQNS 494 (497)
Q Consensus 478 ~~~~~~a~~l~~~~~~~ 494 (497)
+++++++++++|++..+
T Consensus 91 ~~y~~~lL~ieP~n~QA 107 (152)
T 1pc2_A 91 LKYVRGLLQTEPQNNQA 107 (152)
T ss_dssp HHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHhcCCCCHHH
Confidence 77777777777765443
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.91 E-value=2.6e-09 Score=105.09 Aligned_cols=132 Identities=8% Similarity=0.024 Sum_probs=113.5
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHHH---------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc------
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQVQ---------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS------ 423 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~~---------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~------ 423 (497)
.+.....|..+...|+++.|+..+++++. .+..+...|..+...|++++|+..|++++. +.|..
T Consensus 14 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~-~~~~~~~~~~~ 92 (373)
T 1hz4_A 14 AEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQ-MARQHDVWHYA 92 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH-HHHhcCcHHHH
Confidence 45666778888889999999999999872 234678999999999999999999999998 65543
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHHhC--------CCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccc
Q 010932 424 GTVFVRRALSYLMIEQAELALRDAMQAQVCL--------PEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKK 491 (497)
Q Consensus 424 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~--------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~ 491 (497)
..+++++|.++..+|++++|+..|++++++. |....++.++|.++..+|++++|...+++|+.+.+..
T Consensus 93 ~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 168 (373)
T 1hz4_A 93 LWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSY 168 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcc
Confidence 2457899999999999999999999999985 4456788999999999999999999999999887653
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.88 E-value=1e-08 Score=81.12 Aligned_cols=78 Identities=12% Similarity=0.087 Sum_probs=70.8
Q ss_pred HHHHHHHHhHHhhcccHHHHHHHHHHHhhcC------CCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHH
Q 010932 389 MLNTKKFGDIAFRDKDFKNAIEYYSKLVSMM------SVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFY 462 (497)
Q Consensus 389 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~------~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 462 (497)
+...+..|..++..|+|..|+..|++|++.. .+..+.++.++|.|++++|++++|+..+++|++++|++..+..
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 84 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHh
Confidence 5678899999999999999999999999832 2356889999999999999999999999999999999999999
Q ss_pred HHHH
Q 010932 463 MQAL 466 (497)
Q Consensus 463 ~~g~ 466 (497)
+++.
T Consensus 85 n~~~ 88 (104)
T 2v5f_A 85 NLKY 88 (104)
T ss_dssp HHHH
T ss_pred hHHH
Confidence 8873
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.88 E-value=1.2e-08 Score=104.57 Aligned_cols=123 Identities=13% Similarity=0.035 Sum_probs=78.5
Q ss_pred HHHHHhcccccc----ccchhhhhhHHHHHH--HHHHHHHHHHhHHhh----cccHHHHHHHHHHHhhcCCCCcHHHHHH
Q 010932 360 DILLKTGYKDEE----GAENELSFQEWTQQV--QDMLNTKKFGDIAFR----DKDFKNAIEYYSKLVSMMSVPSGTVFVR 429 (497)
Q Consensus 360 ~~~~~~g~~~~~----~~~~e~a~~~~~~~~--~~~~~~~~~g~~~~~----~~~~~~Ai~~~~~ai~~~~p~~~~~~~~ 429 (497)
.....+|..+.. .+++++|+..|++++ .++.+++.+|..+.. .+++++|+..|++|++ . .++.++++
T Consensus 112 ~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~-~--~~~~a~~~ 188 (490)
T 2xm6_A 112 QAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQGRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAE-Q--GNVWSCNQ 188 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH-T--TCHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH-C--CCHHHHHH
Confidence 444455555555 556666666666655 456666666666665 5666666666666666 3 35666666
Q ss_pred HHHHHHh----hhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH----CCChHHHHHHHHHhhcC
Q 010932 430 RALSYLM----IEQAELALRDAMQAQVCLPEWPTAFYMQALALNK----LGMETDAQDMLNDGASF 487 (497)
Q Consensus 430 ~g~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~~~~~~A~~~~~~a~~l 487 (497)
+|.+|.. .+++++|+..|+++++. +++.+++.+|.+|.. .+++++|+..|++|++.
T Consensus 189 Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~g~g~~~~~~~A~~~~~~a~~~ 252 (490)
T 2xm6_A 189 LGYMYSRGLGVERNDAISAQWYRKSATS--GDELGQLHLADMYYFGIGVTQDYTQSRVLFSQSAEQ 252 (490)
T ss_dssp HHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHTT
T ss_pred HHHHHhcCCCCCcCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 6666666 66666666666666654 356666666666665 66677777777666654
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.83 E-value=9.5e-10 Score=102.58 Aligned_cols=90 Identities=14% Similarity=0.077 Sum_probs=68.3
Q ss_pred hHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCC--hHHHHHHHHHHHHCCCh
Q 010932 397 DIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEW--PTAFYMQALALNKLGME 474 (497)
Q Consensus 397 ~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~~~~~~~~ 474 (497)
..+...|+|++|.+.|..++. ..|++. ++|.+|.++++.++|++|+..|++++...++. ..+++++|.++..+|++
T Consensus 110 ~~L~~~g~y~eA~~~l~~~~~-~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~ 187 (282)
T 4f3v_A 110 ACEAAQGNYADAMEALEAAPV-AGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALF 187 (282)
T ss_dssp HHHHHHTCHHHHHHHHTSSCC-TTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHCCCHHHHHHHHHHHHh-cCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCH
Confidence 455667777777777777777 777767 77788888888888888888887776653221 45889999999999999
Q ss_pred HHHHHHHHHhhcCc
Q 010932 475 TDAQDMLNDGASFE 488 (497)
Q Consensus 475 ~~A~~~~~~a~~l~ 488 (497)
++|+..|++|+.-.
T Consensus 188 ~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 188 TEAERRLTEANDSP 201 (282)
T ss_dssp HHHHHHHHHHHTST
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999887543
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=98.82 E-value=9.4e-09 Score=113.03 Aligned_cols=118 Identities=9% Similarity=-0.013 Sum_probs=92.6
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCC---------------
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVP--------------- 422 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~--------------- 422 (497)
....|++.|..+...|.+++|+.+|.++ +++..+.+.|..+.+.|+|++|+++|..|++ ..++
T Consensus 1104 ~p~vWsqLAKAql~~G~~kEAIdsYiKA-dD~say~eVa~~~~~lGkyEEAIeyL~mArk-~~~e~~Idt~LafaYAKl~ 1181 (1630)
T 1xi4_A 1104 EPAVWSQLAKAQLQKGMVKEAIDSYIKA-DDPSSYMEVVQAANTSGNWEELVKYLQMARK-KARESYVETELIFALAKTN 1181 (1630)
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHhc-CChHHHHHHHHHHHHcCCHHHHHHHHHHHHh-hcccccccHHHHHHHHhhc
Confidence 4677889999999999999999999887 8899999999999999999999999988876 4432
Q ss_pred ------------cHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhh
Q 010932 423 ------------SGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGA 485 (497)
Q Consensus 423 ------------~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~ 485 (497)
+...|.++|.++...|+|++|+..|.+| ..|..+|.+|.++|++++|++++++|.
T Consensus 1182 rleele~fI~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA--------~ny~rLA~tLvkLge~q~AIEaarKA~ 1248 (1630)
T 1xi4_A 1182 RLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKAN 1248 (1630)
T ss_pred CHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhh--------hHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 2335666777777777777777777775 356667777777777777777777664
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.82 E-value=1.1e-08 Score=104.05 Aligned_cols=107 Identities=10% Similarity=-0.035 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhc----CCCCc---HHHHHHHHHHHHhhhcHHHHHHHHHHHHHh
Q 010932 381 EWTQQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSM----MSVPS---GTVFVRRALSYLMIEQAELALRDAMQAQVC 453 (497)
Q Consensus 381 ~~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~----~~p~~---~~~~~~~g~~~~~~~~~~~A~~~~~~al~l 453 (497)
.+...++.+....+.+..+..+|+|++|+..|+++++. +.|++ +..+.|+|.+|..+|+|++|+..++++|++
T Consensus 301 ~v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i 380 (490)
T 3n71_A 301 VVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDG 380 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 33444566667777888888999999999999999972 45555 568999999999999999999999999987
Q ss_pred -----CCC---ChHHHHHHHHHHHHCCChHHHHHHHHHhhcC
Q 010932 454 -----LPE---WPTAFYMQALALNKLGMETDAQDMLNDGASF 487 (497)
Q Consensus 454 -----~p~---~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l 487 (497)
.|+ -+..++++|.+|..+|+|++|+..|++|+++
T Consensus 381 ~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i 422 (490)
T 3n71_A 381 YMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAI 422 (490)
T ss_dssp HHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 344 4678999999999999999999999999965
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=3.5e-08 Score=98.69 Aligned_cols=98 Identities=10% Similarity=-0.050 Sum_probs=82.1
Q ss_pred HHHHHHhHHhhcccHHHHHHHHHHHhh----cCCCCc---HHHHHHHHHHHHhhhcHHHHHHHHHHHHHh--------CC
Q 010932 391 NTKKFGDIAFRDKDFKNAIEYYSKLVS----MMSVPS---GTVFVRRALSYLMIEQAELALRDAMQAQVC--------LP 455 (497)
Q Consensus 391 ~~~~~g~~~~~~~~~~~Ai~~~~~ai~----~~~p~~---~~~~~~~g~~~~~~~~~~~A~~~~~~al~l--------~p 455 (497)
.....+......|+|++|+..|+++++ .+.|++ +..+.|+|.+|..+|+|++|+..++++|++ .|
T Consensus 300 ~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp 379 (433)
T 3qww_A 300 NVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSL 379 (433)
T ss_dssp HHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCH
T ss_pred HHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCCh
Confidence 334444455577999999999999987 245666 467899999999999999999999999987 34
Q ss_pred CChHHHHHHHHHHHHCCChHHHHHHHHHhhcCc
Q 010932 456 EWPTAFYMQALALNKLGMETDAQDMLNDGASFE 488 (497)
Q Consensus 456 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~ 488 (497)
+-+..++++|.+|..+|+|++|+..|++|+++-
T Consensus 380 ~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 380 NVASMWLKLGRLYMGLENKAAGEKALKKAIAIM 412 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 446789999999999999999999999999763
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.77 E-value=1.7e-08 Score=102.32 Aligned_cols=118 Identities=10% Similarity=-0.063 Sum_probs=78.5
Q ss_pred HHhccccccc----cchhhhhhHHHHHH-HHHHHHHHHHhH-H--hhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 363 LKTGYKDEEG----AENELSFQEWTQQV-QDMLNTKKFGDI-A--FRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 363 ~~~g~~~~~~----~~~e~a~~~~~~~~-~~~~~~~~~g~~-~--~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
+..|..+... .++++|+..|+++. .++.+++++|.. + ...+++++|+..|++|++ . .++.+++++|.+|
T Consensus 217 ~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~-~--g~~~A~~~Lg~~y 293 (452)
T 3e4b_A 217 DSVARVLGDATLGTPDEKTAQALLEKIAPGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRA-A--DQPRAELLLGKLY 293 (452)
T ss_dssp HHHHHHHTCGGGSSCCHHHHHHHHHHHGGGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHH-T--TCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHH-C--CCHHHHHHHHHHH
Confidence 3444444433 45666666666655 456666777776 3 456777777777777776 3 3677777777777
Q ss_pred Hhhh-----cHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH----CCChHHHHHHHHHhhcC
Q 010932 435 LMIE-----QAELALRDAMQAQVCLPEWPTAFYMQALALNK----LGMETDAQDMLNDGASF 487 (497)
Q Consensus 435 ~~~~-----~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~~~~~~A~~~~~~a~~l 487 (497)
. .| ++++|+..|++|+ |.++.+++++|.+|.. ..++++|+..|++|.+.
T Consensus 294 ~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 351 (452)
T 3e4b_A 294 Y-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARN 351 (452)
T ss_dssp H-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTT
T ss_pred H-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhh
Confidence 6 45 7777777777777 7777777777777666 34777777777777654
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=98.73 E-value=6.8e-08 Score=92.86 Aligned_cols=119 Identities=8% Similarity=-0.019 Sum_probs=94.6
Q ss_pred ccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccH-------HHHHH-HHH--HHhhcCCCCcHHHHHHHHHHHHhh
Q 010932 372 GAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDF-------KNAIE-YYS--KLVSMMSVPSGTVFVRRALSYLMI 437 (497)
Q Consensus 372 ~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~-------~~Ai~-~~~--~ai~~~~p~~~~~~~~~g~~~~~~ 437 (497)
.....+|+..|++++ +.+.++..++.++.....+ ..++. .+. .++. ++|.++.+|.-+|.++...
T Consensus 212 ~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~-~~~~~a~~~~alal~~l~~ 290 (372)
T 3ly7_A 212 DKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLP-ELNNLSIIYQIKAVSALVK 290 (372)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCG-GGTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcc-cCCcCHHHHHHHHHHHHhC
Confidence 455689999999999 5566777777766422111 11111 222 2345 7899999999999999999
Q ss_pred hcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccc
Q 010932 438 EQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQ 492 (497)
Q Consensus 438 ~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~ 492 (497)
|++++|+..+++|++++|+ +.+|..+|.++...|++++|++.|++|+.++|..+
T Consensus 291 gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 291 GKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp TCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred CCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 9999999999999999986 67899999999999999999999999999999754
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.72 E-value=2.5e-08 Score=101.04 Aligned_cols=118 Identities=11% Similarity=0.059 Sum_probs=78.3
Q ss_pred HHHHhcccccccc---chhhhhhHHHHHH----HHHHHHHHHHhHHhhc----ccHHHHHHHHHHHhhcCCCCcHHHHHH
Q 010932 361 ILLKTGYKDEEGA---ENELSFQEWTQQV----QDMLNTKKFGDIAFRD----KDFKNAIEYYSKLVSMMSVPSGTVFVR 429 (497)
Q Consensus 361 ~~~~~g~~~~~~~---~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~----~~~~~Ai~~~~~ai~~~~p~~~~~~~~ 429 (497)
.++.+|..+...| ++++|+..|++++ ..+..++++|..+... +++++|+..|++++ |.++.++++
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa----~g~~~a~~~ 253 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA----PGYPASWVS 253 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG----GGSTHHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc----CCCHHHHHH
Confidence 4555666666666 6667777777666 2344446677776555 57777777777765 566777777
Q ss_pred HHHH-H--HhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCC-----ChHHHHHHHHHhh
Q 010932 430 RALS-Y--LMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLG-----METDAQDMLNDGA 485 (497)
Q Consensus 430 ~g~~-~--~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~-----~~~~A~~~~~~a~ 485 (497)
+|.+ + ...+++++|+..|++|++. +++.+++++|.+|. .| ++++|+..|++|.
T Consensus 254 Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa 314 (452)
T 3e4b_A 254 LAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV 314 (452)
T ss_dssp HHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh
Confidence 7776 3 4567777777777777654 36777777777776 44 7777777777776
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=98.65 E-value=5.5e-09 Score=103.11 Aligned_cols=116 Identities=10% Similarity=0.022 Sum_probs=36.0
Q ss_pred HHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhc---------------------
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSM--------------------- 418 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~--------------------- 418 (497)
+.|..+|..+.+.+.+++|++.|.++ ++...+...+..+...|+|++|+.+|+.+++.
T Consensus 33 ~vWs~La~A~l~~g~~~eAIdsfika-~D~~~y~~V~~~ae~~g~~EeAi~yl~~ark~~~~~~i~~~Li~~Y~Klg~l~ 111 (449)
T 1b89_A 33 AVWSQLAKAQLQKGMVKEAIDSYIKA-DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLA 111 (449)
T ss_dssp -----------------------------------------------------------------------------CHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHcC-CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCccchhHHHHHHHHHHhCCHH
Confidence 57888888888888888888888775 66668888888888888888888888777641
Q ss_pred -----CCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHh
Q 010932 419 -----MSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDG 484 (497)
Q Consensus 419 -----~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a 484 (497)
+++.+..+|.++|.+++..|+|++|+..|.++ ..|.++|.+|.++|+|++|+++|++|
T Consensus 112 e~e~f~~~pn~~a~~~IGd~~~~~g~yeeA~~~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~KA 174 (449)
T 1b89_A 112 ELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKA 174 (449)
T ss_dssp HHTTTTTCC----------------CTTTHHHHHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHcCCHHHHHHHHHHh--------hhHHHHHHHHHHhccHHHHHHHHHHc
Confidence 11223458999999999999999999999988 46889999999999999999999999
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.65 E-value=1e-07 Score=79.51 Aligned_cols=93 Identities=13% Similarity=0.060 Sum_probs=78.7
Q ss_pred hhhhHHHHHH----HHHHHHHHHHhHHhhcc---cHHHHHHHHHHHhhcCC-C-CcHHHHHHHHHHHHhhhcHHHHHHHH
Q 010932 377 LSFQEWTQQV----QDMLNTKKFGDIAFRDK---DFKNAIEYYSKLVSMMS-V-PSGTVFVRRALSYLMIEQAELALRDA 447 (497)
Q Consensus 377 ~a~~~~~~~~----~~~~~~~~~g~~~~~~~---~~~~Ai~~~~~ai~~~~-p-~~~~~~~~~g~~~~~~~~~~~A~~~~ 447 (497)
.+.+.|.+++ .+.+..++.|..+.+.+ ++++||..++..++ .+ | ++.+++|++|.+++++|+|++|+..+
T Consensus 16 ~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~-~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~ 94 (152)
T 1pc2_A 16 KFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLP-KGSKEEQRDYVFYLAVGNYRLKEYEKALKYV 94 (152)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHH-HSCHHHHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh-cCCccchHHHHHHHHHHHHHccCHHHHHHHH
Confidence 3444555544 35788999999999987 88899999999999 77 7 56999999999999999999999999
Q ss_pred HHHHHhCCCChHHHHHHHHHHHH
Q 010932 448 MQAQVCLPEWPTAFYMQALALNK 470 (497)
Q Consensus 448 ~~al~l~p~~~~a~~~~g~~~~~ 470 (497)
+++|+++|+|.+|..-+-.+-.+
T Consensus 95 ~~lL~ieP~n~QA~~Lk~~ie~~ 117 (152)
T 1pc2_A 95 RGLLQTEPQNNQAKELERLIDKA 117 (152)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCHHHHHHHHHHHHH
Confidence 99999999999988776655433
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=2.1e-07 Score=85.91 Aligned_cols=104 Identities=13% Similarity=0.050 Sum_probs=91.5
Q ss_pred HHHHHHHHHHhHHh-----------hcccHHHHHHHHHHHhhcCCCC--cHHHHHHHHHHHHhh-----hcHHHHHHHHH
Q 010932 387 QDMLNTKKFGDIAF-----------RDKDFKNAIEYYSKLVSMMSVP--SGTVFVRRALSYLMI-----EQAELALRDAM 448 (497)
Q Consensus 387 ~~~~~~~~~g~~~~-----------~~~~~~~Ai~~~~~ai~~~~p~--~~~~~~~~g~~~~~~-----~~~~~A~~~~~ 448 (497)
++++.++..|.... ..+....|...+++||+ ++|+ +..+|.-+|..|.+. |+.++|...|+
T Consensus 150 ~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAle-LDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~fe 228 (301)
T 3u64_A 150 VDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACD-LWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFE 228 (301)
T ss_dssp GGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHH-HCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHH-hCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHH
Confidence 56777776666553 22367899999999999 9999 677999999999995 99999999999
Q ss_pred HHHHhCCCC-hHHHHHHHHHHHH-CCChHHHHHHHHHhhcCcccc
Q 010932 449 QAQVCLPEW-PTAFYMQALALNK-LGMETDAQDMLNDGASFEAKK 491 (497)
Q Consensus 449 ~al~l~p~~-~~a~~~~g~~~~~-~~~~~~A~~~~~~a~~l~~~~ 491 (497)
+||+++|+. ..+++..|..|.. +|++++|..++++|++.+|..
T Consensus 229 rAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 229 HLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred HHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 999999985 9999999999988 599999999999999999885
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=8e-08 Score=96.21 Aligned_cols=99 Identities=10% Similarity=-0.070 Sum_probs=83.6
Q ss_pred HHHHHHHHhHHhhcccHHHHHHHHHHHhhc----CCCCc---HHHHHHHHHHHHhhhcHHHHHHHHHHHHHh-----CCC
Q 010932 389 MLNTKKFGDIAFRDKDFKNAIEYYSKLVSM----MSVPS---GTVFVRRALSYLMIEQAELALRDAMQAQVC-----LPE 456 (497)
Q Consensus 389 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~----~~p~~---~~~~~~~g~~~~~~~~~~~A~~~~~~al~l-----~p~ 456 (497)
+.........+...|+|++|+..|+++++. +.|++ +..+.|+|.+|..+|+|++|+..++++|++ -|+
T Consensus 287 ~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~ 366 (429)
T 3qwp_A 287 VQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS 366 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC
Confidence 334455566677889999999999999962 45665 568999999999999999999999999986 233
Q ss_pred ---ChHHHHHHHHHHHHCCChHHHHHHHHHhhcC
Q 010932 457 ---WPTAFYMQALALNKLGMETDAQDMLNDGASF 487 (497)
Q Consensus 457 ---~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l 487 (497)
-+..++++|.+|..+|+|++|+..|++|+++
T Consensus 367 Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 367 HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999965
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=98.61 E-value=8.6e-08 Score=94.63 Aligned_cols=119 Identities=10% Similarity=0.038 Sum_probs=91.7
Q ss_pred HHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcH
Q 010932 361 ILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQA 440 (497)
Q Consensus 361 ~~~~~g~~~~~~~~~e~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~ 440 (497)
.+...|..+...|.+++|...|+++ ..|..+|.++.++|+|++|+++|.+|. ++..|...+.++...|++
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a----~n~~~LA~~L~~Lg~yq~AVea~~KA~------~~~~Wk~v~~aCv~~~ef 193 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV----SNFGRLASTLVHLGEYQAAVDGARKAN------STRTWKEVCFACVDGKEF 193 (449)
T ss_dssp -------------CTTTHHHHHHHT----TCHHHHHHHHHTTTCHHHHHHHHHHHT------CHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh----hhHHHHHHHHHHhccHHHHHHHHHHcC------CchhHHHHHHHHHHcCcH
Confidence 8899999999999999999999765 789999999999999999999999993 489999999999999999
Q ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccccc
Q 010932 441 ELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQN 493 (497)
Q Consensus 441 ~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~ 493 (497)
+.|.....+ |...|++ ...+...|.+.|++++|+..|++|+.+++....
T Consensus 194 ~lA~~~~l~-L~~~ad~---l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~ 242 (449)
T 1b89_A 194 RLAQMCGLH-IVVHADE---LEELINYYQDRGYFEELITMLEAALGLERAHMG 242 (449)
T ss_dssp HHHHHTTTT-TTTCHHH---HHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHH
T ss_pred HHHHHHHHH-HHhCHhh---HHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHH
Confidence 999777765 4466655 446888899999999999999999999866543
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.60 E-value=7.6e-08 Score=96.39 Aligned_cols=134 Identities=8% Similarity=-0.026 Sum_probs=113.1
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHHH----------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcC------C
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQVQ----------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMM------S 420 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~----------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~------~ 420 (497)
....++.++|..+...|++++|++.+.++++ ........|..+...|++++|+..|++++. . .
T Consensus 53 ~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~ 131 (434)
T 4b4t_Q 53 EQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIE-FAKREKRV 131 (434)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHH-HHHHSSCC
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HHHHhCcc
Confidence 4456788899999999999999999998762 123445678888889999999999999987 4 2
Q ss_pred CCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHh------CCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccc
Q 010932 421 VPSGTVFVRRALSYLMIEQAELALRDAMQAQVC------LPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKK 491 (497)
Q Consensus 421 p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l------~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~ 491 (497)
+..+.++.++|.+|..+|+|++|+..+++++.. .+...+++..+|.+|..+|+|++|...|++|+.+.+..
T Consensus 132 ~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~ 208 (434)
T 4b4t_Q 132 FLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSI 208 (434)
T ss_dssp SSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcC
Confidence 334789999999999999999999999999876 44557899999999999999999999999999876543
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.55 E-value=1.6e-07 Score=74.20 Aligned_cols=72 Identities=10% Similarity=-0.102 Sum_probs=65.3
Q ss_pred cHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhC-------CCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccC
Q 010932 423 SGTVFVRRALSYLMIEQAELALRDAMQAQVCL-------PEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 423 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~-------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
++.-.+.+|..+++.|+|+.|+..|++|++.. +..+.++.++|.+++++|++++|+..+++|++++|++..+
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~ 82 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRA 82 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHH
Confidence 36678999999999999999999999999873 4568999999999999999999999999999999987654
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=1.4e-07 Score=90.33 Aligned_cols=134 Identities=13% Similarity=0.068 Sum_probs=90.6
Q ss_pred cccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCC---cceeeeeeee-eCCceEEEEEcCCC
Q 010932 67 VSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHK---RLVNLIGCCA-EGDERLLVAQYMPN 142 (497)
Q Consensus 67 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~~~~ 142 (497)
+..++.|....||+. |..+++|+-.. ......+.+|+.+|+.+.+. .|.+++.++. ..+..++|||+++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 345678888899988 56688898432 11245789999999998642 3556666664 34557899999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC------------------------------------------
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQN------------------------------------------ 180 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~------------------------------------------ 180 (497)
.+|..... ..++......++.++...|..||+..
T Consensus 98 ~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 98 QILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp EECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred eECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 88876321 12344444455555555555444321
Q ss_pred -----------------CcccccCCCcceEeCC---CCC-eeEcccCCccc
Q 010932 181 -----------------RKLYHDLNAYRVLFDE---DGD-PRLSSFGLMKN 210 (497)
Q Consensus 181 -----------------~iiH~Dlkp~Nill~~---~~~-~kl~Dfgla~~ 210 (497)
.++|+|++|.|||++. ++. +.|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1589999999999987 455 48999998763
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=98.51 E-value=2.3e-07 Score=102.29 Aligned_cols=111 Identities=13% Similarity=0.066 Sum_probs=91.4
Q ss_pred hccccccccchhhhhhHHHHHHHHHHHHHHHHhHHh-hcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHH
Q 010932 365 TGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAF-RDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELA 443 (497)
Q Consensus 365 ~g~~~~~~~~~e~a~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A 443 (497)
.|..+...+.+++|+..|+++-....+ ..+++ ..|+|++|++.+.++. ++.+|+++|.++...|++++|
T Consensus 1055 IA~Iai~lglyEEAf~IYkKa~~~~~A----~~VLie~i~nldrAiE~Aervn------~p~vWsqLAKAql~~G~~kEA 1124 (1630)
T 1xi4_A 1055 IANIAISNELFEEAFAIFRKFDVNTSA----VQVLIEHIGNLDRAYEFAERCN------EPAVWSQLAKAQLQKGMVKEA 1124 (1630)
T ss_pred HHHHHHhCCCHHHHHHHHHHcCCHHHH----HHHHHHHHhhHHHHHHHHHhcC------CHHHHHHHHHHHHhCCCHHHH
Confidence 577888899999999999886422111 13333 7788888888888653 389999999999999999999
Q ss_pred HHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccc
Q 010932 444 LRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAK 490 (497)
Q Consensus 444 ~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~ 490 (497)
++.|.+| +++.+|+++|.++.++|+|++|+++|..|.+.++.
T Consensus 1125 IdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1125 IDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred HHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 9999887 88999999999999999999999999999887743
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.51 E-value=2.1e-07 Score=71.63 Aligned_cols=69 Identities=3% Similarity=-0.154 Sum_probs=64.2
Q ss_pred HHHHHHHHHhHHhhccc---HHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCC
Q 010932 388 DMLNTKKFGDIAFRDKD---FKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEW 457 (497)
Q Consensus 388 ~~~~~~~~g~~~~~~~~---~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 457 (497)
+++.+...|.+++..++ .++|...+++|++ ++|+++.+++.+|..+++.|+|++|+..++++++.+|..
T Consensus 5 ~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~-~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 5 TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQ-LEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHH-HCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 56788899999976655 7999999999999 999999999999999999999999999999999999994
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.48 E-value=5.4e-07 Score=75.10 Aligned_cols=97 Identities=14% Similarity=0.119 Sum_probs=84.9
Q ss_pred hccccccccchhhhhhHHHHHH--HHHHHHHHHHhHHhh----cccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHh--
Q 010932 365 TGYKDEEGAENELSFQEWTQQV--QDMLNTKKFGDIAFR----DKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLM-- 436 (497)
Q Consensus 365 ~g~~~~~~~~~e~a~~~~~~~~--~~~~~~~~~g~~~~~----~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~-- 436 (497)
+|..+......+.|++.|+++. .++.+++++|..+.. .+++++|+..|++|.+ . .++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~-~--g~~~a~~~Lg~~y~~G~ 107 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACELNSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACG-L--NDQDGCLILGYKQYAGK 107 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHTS
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHc-C--CCHHHHHHHHHHHHCCC
Confidence 6677777777788999999988 679999999999998 8999999999999999 5 679999999999999
Q ss_pred --hhcHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 010932 437 --IEQAELALRDAMQAQVCLPEWPTAFYMQAL 466 (497)
Q Consensus 437 --~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 466 (497)
.+++++|+..|++|.+. .++.+.+++|.
T Consensus 108 g~~~d~~~A~~~~~~Aa~~--g~~~A~~~l~~ 137 (138)
T 1klx_A 108 GVVKNEKQAVKTFEKACRL--GSEDACGILNN 137 (138)
T ss_dssp SSCCCHHHHHHHHHHHHHT--TCHHHHHHC--
T ss_pred CCCcCHHHHHHHHHHHHHC--CCHHHHHHHhh
Confidence 99999999999999998 56677776653
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=4.1e-07 Score=88.96 Aligned_cols=81 Identities=5% Similarity=-0.081 Sum_probs=56.7
Q ss_pred cccC-CCCCCcEEEEEEEc-------CCcEEEEEEccCCC---CCChhHHHHHHHHhccCC-C--CcceeeeeeeeeC--
Q 010932 67 VSES-GDKAPNVVYRGRLK-------NNRLVAIKRFSRQS---WPDPHQFVTEAAGLGNVR-H--KRLVNLIGCCAEG-- 130 (497)
Q Consensus 67 ~~~l-g~G~~g~V~~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h--~niv~~~~~~~~~-- 130 (497)
+..+ +.|....+|+.... ++..+++|+..... ......+.+|+.+|+.+. + -.+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3556 78888999998764 26789999875432 112356888999888884 2 3467778777654
Q ss_pred -CceEEEEEcCCCCChhh
Q 010932 131 -DERLLVAQYMPNDTLSK 147 (497)
Q Consensus 131 -~~~~lv~e~~~~~~L~~ 147 (497)
...++|||+++|.++.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 34689999999877653
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.37 E-value=1.1e-06 Score=87.80 Aligned_cols=128 Identities=7% Similarity=-0.002 Sum_probs=107.9
Q ss_pred HHHHHhccccccccchhhhhhHHHHHHH----------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcC-----CCCcH
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQVQ----------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMM-----SVPSG 424 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~~----------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~-----~p~~~ 424 (497)
......|..+...+.++.|+..+++++. .+..+.++|..++..|+|++|+..+.+++... .+...
T Consensus 96 ~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~ 175 (434)
T 4b4t_Q 96 VLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLV 175 (434)
T ss_dssp HHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHH
Confidence 3455567788888999999999999873 35678899999999999999999999998621 34457
Q ss_pred HHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCC---C----hHHHHHHHHHHHHCCChHHHHHHHHHhhcC
Q 010932 425 TVFVRRALSYLMIEQAELALRDAMQAQVCLPE---W----PTAFYMQALALNKLGMETDAQDMLNDGASF 487 (497)
Q Consensus 425 ~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~---~----~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l 487 (497)
.++.+.|.+|..+|+|++|...+++++.+.+. . ...+...|..+...++|++|..+|.++++.
T Consensus 176 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~ 245 (434)
T 4b4t_Q 176 DVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFES 245 (434)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 89999999999999999999999999987532 2 466788899999999999999999998864
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=1.7e-06 Score=81.06 Aligned_cols=125 Identities=16% Similarity=0.068 Sum_probs=88.6
Q ss_pred cEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCC-CCcceeeeeeeeeCCceEEEEEcCCCCChhhhhhcCC
Q 010932 76 NVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWD 153 (497)
Q Consensus 76 g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~ 153 (497)
..||+..... +..+++|+-... ....+.+|...|+.+. +--|.++++++.+.+..++|||+++|.++.+....
T Consensus 39 ~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~-- 113 (272)
T 4gkh_A 39 ATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEE-- 113 (272)
T ss_dssp CEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHH--
T ss_pred CeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccC--
Confidence 4799887654 678999986533 2456888999988774 33477888888888899999999999887765422
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcC------------------------------------------------------
Q 010932 154 KQPLPWEMRVRVAYYIAQALDHCNSQ------------------------------------------------------ 179 (497)
Q Consensus 154 ~~~l~~~~~~~i~~~i~~~L~~lh~~------------------------------------------------------ 179 (497)
.......+..+++..|..||..
T Consensus 114 ----~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 189 (272)
T 4gkh_A 114 ----YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPF 189 (272)
T ss_dssp ----CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCC
T ss_pred ----CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccc
Confidence 1112233444455555544431
Q ss_pred -C--CcccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 180 -N--RKLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 180 -~--~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
. .++|+|+.+.|||++.++.+-|+||+.+.
T Consensus 190 ~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 190 SPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp CCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred cCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 0 15899999999999987777899999865
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=98.35 E-value=1.3e-06 Score=82.46 Aligned_cols=129 Identities=12% Similarity=0.032 Sum_probs=96.6
Q ss_pred HHHHHHHhccccccccchhhhhhHHHHHH---H-----HHHHHHHHHhH--Hhhcc--cHHHHHHHHHHHhhcCCCC--c
Q 010932 358 VHDILLKTGYKDEEGAENELSFQEWTQQV---Q-----DMLNTKKFGDI--AFRDK--DFKNAIEYYSKLVSMMSVP--S 423 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~~e~a~~~~~~~~---~-----~~~~~~~~g~~--~~~~~--~~~~Ai~~~~~ai~~~~p~--~ 423 (497)
..+.+...+..+...++.+.|.+.+++.. . +-..+.+.+.. .+..| ++++|+..|+++.+ ..|+ .
T Consensus 135 ~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~-~~p~~~~ 213 (310)
T 3mv2_B 135 TTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQ-TFPTWKT 213 (310)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHT-TSCSHHH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-hCCCccc
Confidence 34555556666777888888888886533 1 12334444433 55555 89999999999888 7776 4
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHHh----------CCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccc
Q 010932 424 GTVFVRRALSYLMIEQAELALRDAMQAQVC----------LPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQ 492 (497)
Q Consensus 424 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~l----------~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~ 492 (497)
...++| ++..+|++++|..++++++++ +|++++++.++..+...+|+ +|.+.+.++.+++|+++
T Consensus 214 ~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp 287 (310)
T 3mv2_B 214 QLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLDHEHA 287 (310)
T ss_dssp HHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCH
T ss_pred HHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCCh
Confidence 556666 899999999999999988777 58899999898888888887 88899999998888865
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=98.31 E-value=1.2e-06 Score=82.77 Aligned_cols=123 Identities=9% Similarity=0.010 Sum_probs=101.9
Q ss_pred HHHhccccccccchhhhhhHHHHHH------HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCC----cHHHHHHHH
Q 010932 362 LLKTGYKDEEGAENELSFQEWTQQV------QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVP----SGTVFVRRA 431 (497)
Q Consensus 362 ~~~~g~~~~~~~~~e~a~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~----~~~~~~~~g 431 (497)
+...|..+...|++++|++.+.+.+ .+.+.+...+.++.++|+.+.|.+.+++..+ .+|+ +-....+++
T Consensus 103 ~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~-~~~d~~~~~d~~l~~La 181 (310)
T 3mv2_B 103 LYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTN-AIEDTVSGDNEMILNLA 181 (310)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHh-cCccccccchHHHHHHH
Confidence 3466777788899999999999985 5788889999999999999999999999999 8883 234445554
Q ss_pred --HHHHhhh--cHHHHHHHHHHHHHhCCCC--hHHHHHHHHHHHHCCChHHHHHHHHHhhcCc
Q 010932 432 --LSYLMIE--QAELALRDAMQAQVCLPEW--PTAFYMQALALNKLGMETDAQDMLNDGASFE 488 (497)
Q Consensus 432 --~~~~~~~--~~~~A~~~~~~al~l~p~~--~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~ 488 (497)
.+.+..| ++++|+..|+++.+..|++ ...+++ ++..+|++++|.+.+++.+++.
T Consensus 182 ea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~ 241 (310)
T 3mv2_B 182 ESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDY 241 (310)
T ss_dssp HHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHH
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhc
Confidence 4466667 9999999999998888873 445555 8999999999999999888874
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=1.5e-06 Score=86.93 Aligned_cols=89 Identities=11% Similarity=0.100 Sum_probs=76.9
Q ss_pred cccchhhhhhHHHHHH------------HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhc----CCCCc---HHHHHHHH
Q 010932 371 EGAENELSFQEWTQQV------------QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSM----MSVPS---GTVFVRRA 431 (497)
Q Consensus 371 ~~~~~e~a~~~~~~~~------------~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~----~~p~~---~~~~~~~g 431 (497)
..|++++|+..+++++ ..+..+.++|.+|..+|+|++|+.+|+++++. +.|++ +..++|+|
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 4578999999999987 46788899999999999999999999999962 35555 56799999
Q ss_pred HHHHhhhcHHHHHHHHHHHHHh-----CCCChH
Q 010932 432 LSYLMIEQAELALRDAMQAQVC-----LPEWPT 459 (497)
Q Consensus 432 ~~~~~~~~~~~A~~~~~~al~l-----~p~~~~ 459 (497)
.+|..+|+|++|+..|++|+++ .|+.+.
T Consensus 390 ~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~ 422 (433)
T 3qww_A 390 RLYMGLENKAAGEKALKKAIAIMEVAHGKDHPY 422 (433)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHH
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHcCCCChH
Confidence 9999999999999999999986 466653
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=1.3e-06 Score=87.37 Aligned_cols=101 Identities=9% Similarity=-0.057 Sum_probs=84.1
Q ss_pred cccchhhhhhHHHHHH------------HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhc----CCCCc---HHHHHHHH
Q 010932 371 EGAENELSFQEWTQQV------------QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSM----MSVPS---GTVFVRRA 431 (497)
Q Consensus 371 ~~~~~e~a~~~~~~~~------------~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~----~~p~~---~~~~~~~g 431 (497)
.+|.+++|+..+++++ ..+..+.++|.+|..+|+|++|+.+|.++++. +.|++ +..++|+|
T Consensus 299 ~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa 378 (429)
T 3qwp_A 299 AHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVG 378 (429)
T ss_dssp HTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHH
Confidence 4578899999999987 56888999999999999999999999999962 34555 56799999
Q ss_pred HHHHhhhcHHHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHHC
Q 010932 432 LSYLMIEQAELALRDAMQAQVC-----LPEW---PTAFYMQALALNKL 471 (497)
Q Consensus 432 ~~~~~~~~~~~A~~~~~~al~l-----~p~~---~~a~~~~g~~~~~~ 471 (497)
.+|..+|+|++|+..|++|+++ .|+. .+++.+++.++..+
T Consensus 379 ~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 379 KLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999986 5665 45556676666544
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=4.2e-06 Score=83.02 Aligned_cols=76 Identities=14% Similarity=0.089 Sum_probs=51.1
Q ss_pred ccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC-------CChhHHHHHHHHhccCCC--Cc-ceeeeeeeeeCCceE
Q 010932 66 IVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW-------PDPHQFVTEAAGLGNVRH--KR-LVNLIGCCAEGDERL 134 (497)
Q Consensus 66 ~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~n-iv~~~~~~~~~~~~~ 134 (497)
-+..+|.|.++.||++... +++.|+||....... ...+++..|.++|+.+.. |. +.+++.+ +....+
T Consensus 34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~ 111 (397)
T 2olc_A 34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAV 111 (397)
T ss_dssp EEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTE
T ss_pred EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccE
Confidence 3567899999999999864 478899998653211 234567889999887732 33 4455543 345568
Q ss_pred EEEEcCCCC
Q 010932 135 LVAQYMPND 143 (497)
Q Consensus 135 lv~e~~~~~ 143 (497)
+|||++++.
T Consensus 112 lvmE~l~g~ 120 (397)
T 2olc_A 112 TVMEDLSHL 120 (397)
T ss_dssp EEECCCTTS
T ss_pred EEEEeCCCc
Confidence 999999764
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.18 E-value=9.1e-06 Score=78.70 Aligned_cols=137 Identities=10% Similarity=0.093 Sum_probs=78.5
Q ss_pred cccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCC--Ccceeeee------eeeeCCceEEEEE
Q 010932 67 VSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRH--KRLVNLIG------CCAEGDERLLVAQ 138 (497)
Q Consensus 67 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~------~~~~~~~~~lv~e 138 (497)
+..++.|..+.||+....+| .+++|+... ....+..|+.++..+.. -.+++++. +....+..++||+
T Consensus 37 ~~~l~gG~~n~~~~v~~~~~-~~vlk~~~~----~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTDSG-AVCLKRIHR----PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EEECC----CEEEEEEETTE-EEEEEEECS----CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeeccccccCcEEEEEeCCC-CEEEEecCC----CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 34556677899999988655 488999875 23445556666655531 12333332 1234566799999
Q ss_pred cCCCCChh--------------hhhhcCCC----C--------CCCHHHH------------------------------
Q 010932 139 YMPNDTLS--------------KHLFHWDK----Q--------PLPWEMR------------------------------ 162 (497)
Q Consensus 139 ~~~~~~L~--------------~~l~~~~~----~--------~l~~~~~------------------------------ 162 (497)
|++|.++. ..++.... . .-.|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 01111000 0 0122210
Q ss_pred -HHHHHHHHHHHHHHH-------------cCCCcccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 163 -VRVAYYIAQALDHCN-------------SQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 163 -~~i~~~i~~~L~~lh-------------~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
..+...+..++.+|+ ... ++|+|+++.|||++.++.+.|+||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPN-LCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCC-EECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCc-eecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 011112333455554 244 9999999999999888899999999764
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=98.17 E-value=3.5e-06 Score=67.66 Aligned_cols=74 Identities=12% Similarity=0.026 Sum_probs=35.5
Q ss_pred HHHHHHHHhHHhhcccHHH---HHHHHHHHhhcCC-C-CcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHH
Q 010932 389 MLNTKKFGDIAFRDKDFKN---AIEYYSKLVSMMS-V-PSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYM 463 (497)
Q Consensus 389 ~~~~~~~g~~~~~~~~~~~---Ai~~~~~ai~~~~-p-~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 463 (497)
...-++.|..+.+..+-.. +|..++..+. .+ | ..-+..|.+|..++++|+|++|+..++..|+++|+|.+|.--
T Consensus 35 ~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~-~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~L 113 (126)
T 1nzn_A 35 KSTQFEYAWCLVRTRYNDDIRKGIVLLEELLP-KGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKEL 113 (126)
T ss_dssp HHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTT-TSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh-cCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 3444444444444433332 5555555554 33 3 234455555555555555555555555555555555444433
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=3.8e-05 Score=70.92 Aligned_cols=81 Identities=10% Similarity=0.012 Sum_probs=69.2
Q ss_pred HHHHHhhcCCCCcHHHHHHHHHHHHh-----------hhcHHHHHHHHHHHHHhCCC--ChHHHHHHHHHHHHC-----C
Q 010932 411 YYSKLVSMMSVPSGTVFVRRALSYLM-----------IEQAELALRDAMQAQVCLPE--WPTAFYMQALALNKL-----G 472 (497)
Q Consensus 411 ~~~~ai~~~~p~~~~~~~~~g~~~~~-----------~~~~~~A~~~~~~al~l~p~--~~~a~~~~g~~~~~~-----~ 472 (497)
.+.+++...+|+++++++-.|.+... ++....|...+++|+++||+ +..+|..+|..|... |
T Consensus 139 ~~~~~l~~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gG 218 (301)
T 3u64_A 139 RLHKVLSRCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGG 218 (301)
T ss_dssp HHHHHHTTCCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTC
T ss_pred hHHHHHHHcCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCC
Confidence 45666766899999998888876543 34567899999999999999 567999999999996 9
Q ss_pred ChHHHHHHHHHhhcCcccc
Q 010932 473 METDAQDMLNDGASFEAKK 491 (497)
Q Consensus 473 ~~~~A~~~~~~a~~l~~~~ 491 (497)
+.++|.+.|++|++++|+.
T Consensus 219 d~ekA~~~ferAL~LnP~~ 237 (301)
T 3u64_A 219 GMEKAHTAFEHLTRYCSAH 237 (301)
T ss_dssp CHHHHHHHHHHHHHHCCTT
T ss_pred CHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999964
|
| >3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.91 E-value=4.9e-05 Score=63.72 Aligned_cols=92 Identities=18% Similarity=0.022 Sum_probs=69.1
Q ss_pred HHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc---------HHHHHHHHHHHHhhhcHHHHHHHHHHHHHhC-------
Q 010932 391 NTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS---------GTVFVRRALSYLMIEQAELALRDAMQAQVCL------- 454 (497)
Q Consensus 391 ~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~---------~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~------- 454 (497)
+++.....++..|.|+.|+-.+..++. +..++ +.++..+|.+++..++|..|...|++||++.
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlS-l~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~ 100 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLT-LSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTS 100 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHH-HHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHH-hhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCC
Confidence 566677777788888888888887666 33222 3477778888888888888888888876542
Q ss_pred ------------------CCChHHHHHHHHHHHHCCChHHHHHHHHH
Q 010932 455 ------------------PEWPTAFYMQALALNKLGMETDAQDMLND 483 (497)
Q Consensus 455 ------------------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 483 (497)
+.+.+..|.++.||.+++++++|+..++.
T Consensus 101 s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 101 KVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred CccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 11237889999999999999999999875
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.90 E-value=2.9e-05 Score=73.31 Aligned_cols=76 Identities=20% Similarity=0.246 Sum_probs=56.2
Q ss_pred ccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCC---cceeeeeeeeeCCceEEEEEcCCC
Q 010932 66 IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHK---RLVNLIGCCAEGDERLLVAQYMPN 142 (497)
Q Consensus 66 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~lv~e~~~~ 142 (497)
-+..+|.|..+.||+....+|+.|.+|+-..........|..|+..|+.+.-. -+++++++. ..++||||+++
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~ 94 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecc
Confidence 35667999999999999999999999987655544456788999998887422 244444432 23899999987
Q ss_pred CCh
Q 010932 143 DTL 145 (497)
Q Consensus 143 ~~L 145 (497)
+..
T Consensus 95 ~~~ 97 (288)
T 3f7w_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred cCC
Confidence 654
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.90 E-value=6e-05 Score=71.76 Aligned_cols=75 Identities=13% Similarity=0.040 Sum_probs=59.8
Q ss_pred cccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCC---CCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 67 VSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR---HKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 67 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
+..++.|....+|+... ++..+++|+.... ....+..|+..|+.+. ...+++++.++...+..++||||++|.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 45678899999999986 4677889987643 3567889999998884 356888888887778899999999987
Q ss_pred Ch
Q 010932 144 TL 145 (497)
Q Consensus 144 ~L 145 (497)
.+
T Consensus 117 ~~ 118 (312)
T 3jr1_A 117 KN 118 (312)
T ss_dssp CC
T ss_pred CC
Confidence 65
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=97.83 E-value=0.0001 Score=59.14 Aligned_cols=93 Identities=9% Similarity=-0.054 Sum_probs=82.5
Q ss_pred hcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHH---HHHHHHHHHHhC-C-CChHHHHHHHHHHHHCCChH
Q 010932 401 RDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAEL---ALRDAMQAQVCL-P-EWPTAFYMQALALNKLGMET 475 (497)
Q Consensus 401 ~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~---A~~~~~~al~l~-p-~~~~a~~~~g~~~~~~~~~~ 475 (497)
.......+.+.|.+++. .++.+..+-|++|.++.+..+..+ +|..++..++-+ | ..-+.+|.+|.+++++|+|+
T Consensus 13 ~~~~l~~~~~~y~~e~~-~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~ 91 (126)
T 1nzn_A 13 SVEDLLKFEKKFQSEKA-AGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYE 91 (126)
T ss_dssp HHHHHHHHHHHHHHHHH-HSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred CHHHHHHHHHHHHHHhc-cCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHH
Confidence 34456778888888888 788889999999999999888877 999999999987 5 57899999999999999999
Q ss_pred HHHHHHHHhhcCccccccC
Q 010932 476 DAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 476 ~A~~~~~~a~~l~~~~~~~ 494 (497)
+|+.+++..++.+|.+..|
T Consensus 92 ~A~~~~~~lL~~eP~n~QA 110 (126)
T 1nzn_A 92 KALKYVRGLLQTEPQNNQA 110 (126)
T ss_dssp HHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHhCCCCHHH
Confidence 9999999999999988655
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.80 E-value=7.2e-05 Score=71.70 Aligned_cols=159 Identities=11% Similarity=0.081 Sum_probs=89.5
Q ss_pred cccCHHHHHHHhcCCCccc--ccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCc--cee
Q 010932 47 KEFVLADLRAATNGFSSEL--IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKR--LVN 122 (497)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~--~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~ 122 (497)
..++.+++......|.... -++.++.|....+|+....+| .+++|+..... ..+.+..|+.++..+...+ +.+
T Consensus 5 ~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~ 81 (322)
T 2ppq_A 5 TDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPL 81 (322)
T ss_dssp CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred ccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCc
Confidence 3456677777776665422 345677888889999987656 58889887531 2345667888777664212 233
Q ss_pred eeee------eeeCCceEEEEEcCCCCChhh--------------hhhcC----CCC---CCC---HHHHHH--------
Q 010932 123 LIGC------CAEGDERLLVAQYMPNDTLSK--------------HLFHW----DKQ---PLP---WEMRVR-------- 164 (497)
Q Consensus 123 ~~~~------~~~~~~~~lv~e~~~~~~L~~--------------~l~~~----~~~---~l~---~~~~~~-------- 164 (497)
++.. ....+..+++++|++|..+.. .++.. ... ... |.....
T Consensus 82 ~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 161 (322)
T 2ppq_A 82 PLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE 161 (322)
T ss_dssp BCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred ccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHh
Confidence 3321 122355789999999865421 01110 000 011 221100
Q ss_pred ----HHHHHHHHHHHHHc-------CCCcccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 165 ----VAYYIAQALDHCNS-------QNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 165 ----i~~~i~~~L~~lh~-------~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
+...+...+..+.. .+ ++|+|+.+.|||++.++.+.|+||+.+.
T Consensus 162 ~~~~l~~~l~~~~~~l~~~~~~~~~~~-liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 162 VEKGLREEIRPEIDYLAAHWPKDLPAG-VIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TSTTHHHHHHHHHHHHHHHCCCSSCEE-EECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhHHHHHHHHHHHHhhCcccCCcc-cCCCCCCccCEEEeCCceEEEecchhcc
Confidence 00113334444442 23 8999999999999977666899999765
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=97.76 E-value=0.0001 Score=65.01 Aligned_cols=144 Identities=15% Similarity=0.067 Sum_probs=94.3
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCccccC
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNS-QNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN 220 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~gt 220 (497)
.-||.++|.. .+.++++.+++.++.|.+.+|.-+-. .. -..+=+.|..|++..+|.|.+.+ +.+. ...
T Consensus 32 ~vSL~eIL~~-~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~~~~i~~~~~i~l~~dG~V~f~~-~~s~--------~~~ 100 (229)
T 2yle_A 32 ALSLEEILRL-YNQPINEEQAWAVCYQCCGSLRAAARRRQ-PRHRVRSAAQIRVWRDGAVTLAP-AADD--------AGE 100 (229)
T ss_dssp EEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred cccHHHHHHH-cCCCcCHHHHHHHHHHHHHHHHhhhhccc-CCceecCCcceEEecCCceeccc-cccc--------ccc
Confidence 3468888865 37799999999999999999887621 12 12233457999999999997764 1111 122
Q ss_pred CCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHhccc
Q 010932 221 LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQY 300 (497)
Q Consensus 221 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 300 (497)
..+.+||... ...+.+.-|||||++||.-+--..|. .-+...++.|.+||..|...
T Consensus 101 ~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e-----------------------~eE~eLS~~LE~LL~~Mt~~ 156 (229)
T 2yle_A 101 PPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKE-----------------------NEERELSPPLEQLIDHMANT 156 (229)
T ss_dssp ------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCT-----------------------TEEECCCHHHHHHHHHHTTC
T ss_pred cCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCc-----------------------ccchhhCHHHHHHHHHHHhc
Confidence 3567888764 34456778999999999888654322 11233556688888888765
Q ss_pred -------------------------CCCCCCCHHHHHHHhhhhhc
Q 010932 301 -------------------------EAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 301 -------------------------dp~~Rps~~~ll~~l~~~~~ 320 (497)
.+..|+|.++|++....-.+
T Consensus 157 ~~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~~hl~ 201 (229)
T 2yle_A 157 VEADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLCAAHLP 201 (229)
T ss_dssp CC--------------------CCSCCCCCCSHHHHHHHHHTTSS
T ss_pred ccccccccccccccccccccccccccccCcCCHHHHHHHHHhhcc
Confidence 34688899999987766544
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00016 Score=72.06 Aligned_cols=75 Identities=16% Similarity=0.140 Sum_probs=45.7
Q ss_pred cccccCCCCCCcEEEEEEEcCCcEEEEEEccCCC----C---C--ChhHHHHHHHHhcc-CCCCcceeeeeeeeeCCceE
Q 010932 65 LIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQS----W---P--DPHQFVTEAAGLGN-VRHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~----~---~--~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~ 134 (497)
.-+..+|.|..+.||++.. ++..++||...... . . ....+..|+..+.. .....+.+++.+. ....+
T Consensus 37 ~~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~ 113 (420)
T 2pyw_A 37 LVIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMAL 113 (420)
T ss_dssp CEEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTE
T ss_pred eEEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccE
Confidence 3456789999999999965 46789999532211 0 1 22233334333221 1234566666655 46679
Q ss_pred EEEEcC-CC
Q 010932 135 LVAQYM-PN 142 (497)
Q Consensus 135 lv~e~~-~~ 142 (497)
+||||+ +|
T Consensus 114 lv~e~l~~g 122 (420)
T 2pyw_A 114 IGMRYLEPP 122 (420)
T ss_dssp EEECCCCTT
T ss_pred EEEeecCCc
Confidence 999999 76
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=97.68 E-value=7.9e-05 Score=71.65 Aligned_cols=77 Identities=10% Similarity=0.001 Sum_probs=66.7
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHH
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQA 465 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 465 (497)
.++..+...|..+...|++++|+..+++|+. ++|+ +.+|..+|.++...|++++|++.|++|+.++|....-++..+
T Consensus 275 ~~a~~~~alal~~l~~gd~d~A~~~l~rAl~-Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~~~~~~ 351 (372)
T 3ly7_A 275 NLSIIYQIKAVSALVKGKTDESYQAINTGID-LEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYWIEN 351 (372)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhCCCHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChHHHHhC
Confidence 4566677778888888999999999999999 8975 888999999999999999999999999999999865444433
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.59 E-value=0.001 Score=63.71 Aligned_cols=159 Identities=11% Similarity=0.064 Sum_probs=90.3
Q ss_pred ccccCHHHHHHHhcCCCcc--cccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCc--ce
Q 010932 46 FKEFVLADLRAATNGFSSE--LIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKR--LV 121 (497)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~--~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv 121 (497)
+...+.+++......+.-. .-+..++ |....||+....+|+.+++|+..... .....+..|..++..+...+ ++
T Consensus 8 ~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp 85 (328)
T 1zyl_A 8 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVA 85 (328)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBC
T ss_pred CCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeec
Confidence 4445556665555444221 1233456 77789999887677789999986432 24567778888887774222 34
Q ss_pred eeeee-----eeeCCceEEEEEcCCCCChhh-----------h---hhc----CC---CCCCCHHHH-------------
Q 010932 122 NLIGC-----CAEGDERLLVAQYMPNDTLSK-----------H---LFH----WD---KQPLPWEMR------------- 162 (497)
Q Consensus 122 ~~~~~-----~~~~~~~~lv~e~~~~~~L~~-----------~---l~~----~~---~~~l~~~~~------------- 162 (497)
+++.. ....+..++||++++|.++.. . ++. .. ....++...
T Consensus 86 ~~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (328)
T 1zyl_A 86 APVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATL 165 (328)
T ss_dssp CCCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSS
T ss_pred ceeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCc
Confidence 44432 122445678999998754321 0 110 00 111222111
Q ss_pred ---------HHHHHHHHHHHHHH----HcCCCcccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 163 ---------VRVAYYIAQALDHC----NSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 163 ---------~~i~~~i~~~L~~l----h~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
...+..++..+.-+ .... ++|+|+++.|||++ + .+.|+||+.+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 166 IPSGLKAAFLKATDELIAAVTAHWREDFTVL-RLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp SCTTTHHHHHHHHHHHHHHHHHHCCSCSCCE-ECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhcCCee-eeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 11112222222222 1223 79999999999999 4 89999998765
|
| >4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00042 Score=73.14 Aligned_cols=120 Identities=7% Similarity=-0.040 Sum_probs=99.2
Q ss_pred cccccchhhhhhHHHHHHHH--------------------------HHHHHHHHhHHhhcccHHHHHHHHHHHhhcC-CC
Q 010932 369 DEEGAENELSFQEWTQQVQD--------------------------MLNTKKFGDIAFRDKDFKNAIEYYSKLVSMM-SV 421 (497)
Q Consensus 369 ~~~~~~~e~a~~~~~~~~~~--------------------------~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~-~p 421 (497)
....++.+.|.+.|+++++. +..|...+....+.|+.+.|...|.+|++ . .+
T Consensus 388 ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~-~~~~ 466 (679)
T 4e6h_A 388 YELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRR-LKKL 466 (679)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH-TGGG
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hcCC
Confidence 33456677777777777642 23566777777788999999999999999 6 55
Q ss_pred CcHHHHHHHHHHHHhhhc-HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcc
Q 010932 422 PSGTVFVRRALSYLMIEQ-AELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEA 489 (497)
Q Consensus 422 ~~~~~~~~~g~~~~~~~~-~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~ 489 (497)
....+|...|....+.++ ++.|...|+++++..|+++..|...+..+...|+.+.|...|++|+...+
T Consensus 467 ~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~ 535 (679)
T 4e6h_A 467 VTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIYVNEESQVKSLFESSIDKIS 535 (679)
T ss_dssp SCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSS
T ss_pred CChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcC
Confidence 567888888888777765 89999999999999999999988888888899999999999999999877
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00025 Score=67.26 Aligned_cols=71 Identities=13% Similarity=0.129 Sum_probs=44.3
Q ss_pred cccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcc-eeeeeeeeeCCceEEEEEcC-CCCC
Q 010932 67 VSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRL-VNLIGCCAEGDERLLVAQYM-PNDT 144 (497)
Q Consensus 67 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~-~~~~ 144 (497)
+..++.|....+|+. ..+++|+....... .....+|+.+++.+...++ .++++++ ...-++|+||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence 556678888999998 45888988653211 1224567777776642222 4555443 33458999999 6655
Q ss_pred h
Q 010932 145 L 145 (497)
Q Consensus 145 L 145 (497)
|
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00074 Score=54.96 Aligned_cols=80 Identities=4% Similarity=-0.046 Sum_probs=59.7
Q ss_pred HHHHHHHHHhHHhhcc---cHHHHHHHHHHHhhcCCC-CcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHH
Q 010932 388 DMLNTKKFGDIAFRDK---DFKNAIEYYSKLVSMMSV-PSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYM 463 (497)
Q Consensus 388 ~~~~~~~~g~~~~~~~---~~~~Ai~~~~~ai~~~~p-~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 463 (497)
....-++.|..+.+.. +-.++|..++..+. .+| ..-+..|.+|..++++|+|++|...++..|+++|+|.+|.--
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~-~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~L 116 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYK-EAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGAL 116 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHH-HCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh-cCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 4566677777776554 45678888888888 777 356788888888888888888888888888888888776655
Q ss_pred HHHHH
Q 010932 464 QALAL 468 (497)
Q Consensus 464 ~g~~~ 468 (497)
+..+-
T Consensus 117 k~~Ie 121 (144)
T 1y8m_A 117 KSMVE 121 (144)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00031 Score=70.11 Aligned_cols=73 Identities=16% Similarity=0.260 Sum_probs=50.8
Q ss_pred cccCCCCCCcEEEEEEEcC--------CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCc-ceeeeeeeeeCCceEEEE
Q 010932 67 VSESGDKAPNVVYRGRLKN--------NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKR-LVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 67 ~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~ 137 (497)
+..++.|....||++...+ +..+++|+.... ...+.+.+|..+++.+...+ .+++++.+.+ .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 4567888889999998753 578999998432 12256678999988885333 3566665542 3899
Q ss_pred EcCCCCCh
Q 010932 138 QYMPNDTL 145 (497)
Q Consensus 138 e~~~~~~L 145 (497)
||++|.+|
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99987554
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00073 Score=64.96 Aligned_cols=138 Identities=10% Similarity=-0.008 Sum_probs=71.3
Q ss_pred cccCCCCCCcE-EEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCC--CcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 67 VSESGDKAPNV-VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRH--KRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 67 ~~~lg~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
+..++.|.... +|+....+|..+++|....... ..+..|+.+++.+.. -.+.+++.+.... -+++||++.+.
T Consensus 23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~ 97 (333)
T 3csv_A 23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDA 97 (333)
T ss_dssp ECC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSC
T ss_pred eeECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCc
Confidence 34455554444 6677654467788887554321 234556666666632 2345566553332 37899999776
Q ss_pred Chhhhhhc---------------------CCC---CCCCHHHHH-------HHH-------------HHHHHHHHHH---
Q 010932 144 TLSKHLFH---------------------WDK---QPLPWEMRV-------RVA-------------YYIAQALDHC--- 176 (497)
Q Consensus 144 ~L~~~l~~---------------------~~~---~~l~~~~~~-------~i~-------------~~i~~~L~~l--- 176 (497)
++.+++.. ... +.+...... .+. ..+...+..+
T Consensus 98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~ 177 (333)
T 3csv_A 98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA 177 (333)
T ss_dssp BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 66543321 001 112211100 000 0111112222
Q ss_pred ---HcCCCcccccCCCcceEeCCC----CCeeEcccCCccc
Q 010932 177 ---NSQNRKLYHDLNAYRVLFDED----GDPRLSSFGLMKN 210 (497)
Q Consensus 177 ---h~~~~iiH~Dlkp~Nill~~~----~~~kl~Dfgla~~ 210 (497)
+... ++|+|+.+.|||++.+ +.+.|+||+.+..
T Consensus 178 ~~~~~~~-lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 178 QLEGDMV-FVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HCCSCCE-EECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cccCCCe-eEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1234 8999999999999874 6789999998764
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00095 Score=53.61 Aligned_cols=79 Identities=5% Similarity=-0.019 Sum_probs=63.1
Q ss_pred HHHHHHhHHhhc---ccHHHHHHHHHHHhhcCCCC-cHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 010932 391 NTKKFGDIAFRD---KDFKNAIEYYSKLVSMMSVP-SGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQAL 466 (497)
Q Consensus 391 ~~~~~g~~~~~~---~~~~~Ai~~~~~ai~~~~p~-~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 466 (497)
.-++.|..+.+. .+...+|..++..+. .+|. .-+.+|.+|..++++|+|++|...++..|+++|+|.+|.--+..
T Consensus 42 t~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~-~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~ 120 (134)
T 3o48_A 42 SRFNYAWGLIKSTDVNDERLGVKILTDIYK-EAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 120 (134)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHH-HCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHcCCCHHHHHHHHHHHHHHHh-cCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHH
Confidence 444555445433 366789999999998 7884 47899999999999999999999999999999999888776665
Q ss_pred HHHH
Q 010932 467 ALNK 470 (497)
Q Consensus 467 ~~~~ 470 (497)
+-.+
T Consensus 121 Ie~k 124 (134)
T 3o48_A 121 VEDK 124 (134)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00088 Score=53.82 Aligned_cols=88 Identities=9% Similarity=-0.005 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcH---HHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHCCChHHHHHH
Q 010932 405 FKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQA---ELALRDAMQAQVCLPE-WPTAFYMQALALNKLGMETDAQDM 480 (497)
Q Consensus 405 ~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~---~~A~~~~~~al~l~p~-~~~a~~~~g~~~~~~~~~~~A~~~ 480 (497)
+....+-|.+-+. -.|. +.+-|+.|.++.+..+. .++|..++..++-+|. .-+.+|.+|.+++++|+|++|+.+
T Consensus 23 L~~l~~qy~~E~~-~~vs-~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y 100 (134)
T 3o48_A 23 LEILRQQVVSEGG-PTAT-IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRY 100 (134)
T ss_dssp HHHHHHHHHHTTG-GGSC-HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHhC-CCCC-hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHH
Confidence 3334444444323 3344 78899999998887654 5799999999999994 589999999999999999999999
Q ss_pred HHHhhcCccccccC
Q 010932 481 LNDGASFEAKKQNS 494 (497)
Q Consensus 481 ~~~a~~l~~~~~~~ 494 (497)
.+..++.+|.+..|
T Consensus 101 ~d~lL~~eP~N~QA 114 (134)
T 3o48_A 101 VDTLFEHERNNKQV 114 (134)
T ss_dssp HHHHHTTCTTCHHH
T ss_pred HHHHHhhCCCCHHH
Confidence 99999999998654
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0019 Score=52.56 Aligned_cols=88 Identities=9% Similarity=0.006 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcH---HHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHCCChHHHHHH
Q 010932 405 FKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQA---ELALRDAMQAQVCLPE-WPTAFYMQALALNKLGMETDAQDM 480 (497)
Q Consensus 405 ~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~---~~A~~~~~~al~l~p~-~~~a~~~~g~~~~~~~~~~~A~~~ 480 (497)
.+...+-|.+-+. +.-+..+-|+.|.++.+..+. .++|..++..++-+|. .-+.+|.+|.+++++|+|++|+.+
T Consensus 22 L~~lr~qY~~E~~--~~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y 99 (144)
T 1y8m_A 22 LEILRQQVVSEGG--PTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRY 99 (144)
T ss_dssp HHHHHHHHHHTTS--TTSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHH
T ss_pred HHHHHHHHHHhcc--CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHH
Confidence 3344444544333 244589999999999887655 4799999999999984 579999999999999999999999
Q ss_pred HHHhhcCccccccC
Q 010932 481 LNDGASFEAKKQNS 494 (497)
Q Consensus 481 ~~~a~~l~~~~~~~ 494 (497)
.+..++.+|.+..+
T Consensus 100 ~d~lL~~eP~n~QA 113 (144)
T 1y8m_A 100 VDTLFEHERNNKQV 113 (144)
T ss_dssp HHHHHHTCCCCHHH
T ss_pred HHHHHhcCCCcHHH
Confidence 99999999987644
|
| >4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00054 Score=72.31 Aligned_cols=107 Identities=6% Similarity=-0.039 Sum_probs=55.1
Q ss_pred hHHHHHH----HHHHHHHHHHhHHhhcccHHHHH-HHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHh-
Q 010932 380 QEWTQQV----QDMLNTKKFGDIAFRDKDFKNAI-EYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVC- 453 (497)
Q Consensus 380 ~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai-~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l- 453 (497)
..|++++ ..+..|+..|.-+...|+.++|+ ..|.+|+. ..|.+...|+..+......|+++.|-..|++++..
T Consensus 330 ~~Ye~aL~~~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~-~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l 408 (679)
T 4e6h_A 330 YVYMQAAQHVCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQ-CIPNSAVLAFSLSEQYELNTKIPEIETTILSCIDRI 408 (679)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 3444444 33455555555555555555554 55555555 55555555555555555555555555555555543
Q ss_pred ----------CCC-----------ChHHHHHHHHHHHHCCChHHHHHHHHHhhcC
Q 010932 454 ----------LPE-----------WPTAFYMQALALNKLGMETDAQDMLNDGASF 487 (497)
Q Consensus 454 ----------~p~-----------~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l 487 (497)
.|. ...+|...+....+.|..+.|...|.+|++.
T Consensus 409 ~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~ 463 (679)
T 4e6h_A 409 HLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRL 463 (679)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHT
T ss_pred HHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 132 2334555555555555555555555555543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 497 | ||||
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 2e-42 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 4e-40 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 5e-40 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 3e-39 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 1e-38 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 3e-38 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 3e-37 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 2e-36 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 4e-36 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 1e-35 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 4e-35 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 7e-34 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 9e-34 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 3e-33 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 4e-33 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 5e-33 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 5e-33 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 9e-33 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 1e-32 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 1e-32 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 2e-32 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 4e-32 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 6e-32 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 3e-31 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 1e-30 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 1e-30 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-30 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 2e-30 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 8e-30 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 1e-29 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 2e-29 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 3e-29 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 3e-29 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 5e-29 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 1e-28 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 1e-27 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 2e-27 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 3e-27 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 2e-26 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 4e-26 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 6e-26 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 2e-25 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 2e-25 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 1e-24 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-24 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 6e-24 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 1e-23 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 6e-23 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 2e-22 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 4e-22 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 7e-22 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 9e-22 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 1e-21 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-21 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 2e-21 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 2e-19 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 2e-19 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 1e-17 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 1e-16 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 4e-16 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 2e-14 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 3e-14 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 1e-06 |
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 149 bits (378), Expect = 2e-42
Identities = 55/242 (22%), Positives = 108/242 (44%), Gaps = 12/242 (4%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136
VV G+ + VAIK S + +F+ EA + N+ H++LV L G C + ++
Sbjct: 19 VVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 77
Query: 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE 196
+YM N L +L + + + + + +A+++ S+ L+ DL A L ++
Sbjct: 78 TEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQF-LHRDLAARNCLVND 135
Query: 197 DGDPRLSSFGLMKNSRDGKSYSTN-----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
G ++S FGL + D + S+ + ++PPE L + +S I+++G ++ ++
Sbjct: 136 QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 195
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFL 311
S +P + L + + ++ + C +A +RP K L
Sbjct: 196 SLGKMPYER----FTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 251
Query: 312 LS 313
LS
Sbjct: 252 LS 253
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 144 bits (363), Expect = 4e-40
Identities = 52/258 (20%), Positives = 114/258 (44%), Gaps = 12/258 (4%)
Query: 77 VVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
VY G K + VA+K + + +F+ EAA + ++H LV L+G C +
Sbjct: 32 EVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 90
Query: 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD 195
+ ++M L +L ++Q + + + +A I+ A+++ +N ++ DL A L
Sbjct: 91 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVG 149
Query: 196 EDGDPRLSSFGLMKNSRDGKSYST-----NLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
E+ +++ FGL + + + +T PE L + +S ++++G +L ++
Sbjct: 150 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 209
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
+ P +D+ + L++ + ++ EL C Q+ DRP
Sbjct: 210 ATYGM-SPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 265
Query: 311 LLSAVAPLQKQTEVASHV 328
+ A + +++ ++ V
Sbjct: 266 IHQAFETMFQESSISDEV 283
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 143 bits (361), Expect = 5e-40
Identities = 50/249 (20%), Positives = 104/249 (41%), Gaps = 12/249 (4%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136
+V+ G N VAIK + + F+ EA + + H +LV L G C E LV
Sbjct: 20 LVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 78
Query: 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE 196
++M + LS + + E + + + + + + ++ DL A L E
Sbjct: 79 FEFMEHGCLSDY-LRTQRGLFAAETLLGMCLDVCEGMAYLEEACV-IHRDLAARNCLVGE 136
Query: 197 DGDPRLSSFGLMKNSRDGKSYSTN-----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+ ++S FG+ + D + S+ + + PE R +S ++S+G ++ ++
Sbjct: 137 NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 196
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFL 311
S IP + + ++ + + +T + ++ + C + +DRP L
Sbjct: 197 SEGKIPYENRSN----SEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRL 252
Query: 312 LSAVAPLQK 320
L +A + +
Sbjct: 253 LRQLAEIAE 261
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 141 bits (357), Expect = 3e-39
Identities = 53/252 (21%), Positives = 107/252 (42%), Gaps = 12/252 (4%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136
V+ G + VA+K + S P F+ EA + ++H+RLV L + + ++
Sbjct: 28 EVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85
Query: 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE 196
+YM N +L L L + +A IA+ + +N ++ DL A +L +
Sbjct: 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-IHRDLRAANILVSD 144
Query: 197 DGDPRLSSFGLMKNSRDGKSYSTN-----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+++ FGL + D + + + +T PE + G +S ++S+G +L +++
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFL 311
+ IP + ++ ++ + +L +L C + +DRP +L
Sbjct: 205 THGRIPYPGMTN----PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 260
Query: 312 LSAVAPLQKQTE 323
S + TE
Sbjct: 261 RSVLEDFFTATE 272
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 140 bits (354), Expect = 1e-38
Identities = 55/292 (18%), Positives = 113/292 (38%), Gaps = 26/292 (8%)
Query: 49 FVLADLRAATNGFSSELIVSES------GDKAPNVVYRGRLK----NNRLVAIKRFSRQS 98
F D A F+ E+ +S G V G LK VAIK
Sbjct: 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66
Query: 99 WPDPH-QFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPL 157
F++EA+ +G H +++L G + +++ ++M N +L +
Sbjct: 67 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQF 125
Query: 158 PWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSY 217
V + IA + + + ++ DL A +L + + ++S FGL + D S
Sbjct: 126 TVIQLVGMLRGIAAGMKYL-ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 184
Query: 218 STN---------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK 268
T + +T PE ++ + S ++SYG V+ +++S P + +
Sbjct: 185 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD----MTNQ 240
Query: 269 NLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQK 320
+++ ++ + + L +L C Q + RP +++ + + +
Sbjct: 241 DVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 292
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (349), Expect = 3e-38
Identities = 56/247 (22%), Positives = 107/247 (43%), Gaps = 10/247 (4%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL-L 135
V G + VA+K + F+ EA+ + +RH LV L+G E L +
Sbjct: 22 DVMLGDYRG-NKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 78
Query: 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD 195
V +YM +L +L + L + ++ + + +A+++ N ++ DL A VL
Sbjct: 79 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVS 137
Query: 196 EDGDPRLSSFGLMKN-SRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGK 254
ED ++S FGL K S + + +T PE LR + +S ++S+G +L ++ S
Sbjct: 138 EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 197
Query: 255 HIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314
+P I K+++ ++ + + + E+ C +A RP L
Sbjct: 198 RVPYPR----IPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 253
Query: 315 VAPLQKQ 321
+ ++
Sbjct: 254 LEHIKTH 260
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 136 bits (343), Expect = 3e-37
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 12/252 (4%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136
V+ G VAIK + P F+ EA + +RH++LV L + +V
Sbjct: 32 EVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 89
Query: 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE 196
+YM +L L + L V +A IA + + N ++ DL A +L E
Sbjct: 90 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGE 148
Query: 197 DGDPRLSSFGLMKNSRDGKSYSTN-----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+ +++ FGL + D + + + +T PE GR +S ++S+G +L +L
Sbjct: 149 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 208
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFL 311
+ +P ++ + +L ++ E L +L +C + E ++RP ++L
Sbjct: 209 TKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 264
Query: 312 LSAVAPLQKQTE 323
+ + TE
Sbjct: 265 QAFLEDYFTSTE 276
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 135 bits (340), Expect = 2e-36
Identities = 47/279 (16%), Positives = 102/279 (36%), Gaps = 44/279 (15%)
Query: 77 VVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134
VV++ K + ++A K + P +Q + E L +V G E
Sbjct: 21 VVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 80
Query: 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194
+ ++M +L + L +P ++ +V+ + + L + +++ ++ D+ +L
Sbjct: 81 ICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 138
Query: 195 DEDGDPRLSSFGLMKNSRDGKSYST--NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
+ G+ +L FG+ D + S +Y PE L+ +S I+S G L+++
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
Query: 253 GKH----------------------------------IPPSHALDVIRGKNLLLLMDSSL 278
G++ S+ +D + L+D +
Sbjct: 199 GRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIV 258
Query: 279 EGQYANEDAT----QLVELASKCLQYEAKDRPDVKFLLS 313
+ + + +KCL +R D+K L+
Sbjct: 259 NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 133 bits (337), Expect = 4e-36
Identities = 55/244 (22%), Positives = 92/244 (37%), Gaps = 14/244 (5%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPDP---HQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
VY R ++N+ +VAIK+ S + E L +RH + GC
Sbjct: 30 AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT 89
Query: 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRV 192
LV +Y H K+PL V + Q L + +S N ++ D+ A +
Sbjct: 90 AWLVMEYCLGSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHNM-IHRDVKAGNI 146
Query: 193 LFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRT---GRVIPESVIYSYGTVLLD 249
L E G +L FG S+ + PE + G+ + ++S G ++
Sbjct: 147 LLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 206
Query: 250 LLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVK 309
L K P + + ++ +L+ + +E V CLQ +DRP +
Sbjct: 207 LAERKP-PLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFV---DSCLQKIPQDRPTSE 262
Query: 310 FLLS 313
LL
Sbjct: 263 VLLK 266
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (332), Expect = 1e-35
Identities = 48/257 (18%), Positives = 104/257 (40%), Gaps = 20/257 (7%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136
VY+G+ + V + + + F E L RH ++ +G + +V
Sbjct: 23 TVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIV 81
Query: 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE 196
Q+ +L HL H + + +A AQ +D+ ++++ ++ DL + + E
Sbjct: 82 TQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKSI-IHRDLKSNNIFLHE 139
Query: 197 DGDPRLSSFGLMKNSRDGKSYST------NLAYTPPEFLRT---GRVIPESVIYSYGTVL 247
D ++ FGL ++ + PE +R +S +Y++G VL
Sbjct: 140 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 248 LDLLSGK----HIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAK 303
+L++G+ +I + + G+ L S + + L ++CL+ +
Sbjct: 200 YELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA----MKRLMAECLKKKRD 255
Query: 304 DRPDVKFLLSAVAPLQK 320
+RP +L+++ L +
Sbjct: 256 ERPLFPQILASIELLAR 272
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (326), Expect = 4e-35
Identities = 49/243 (20%), Positives = 96/243 (39%), Gaps = 15/243 (6%)
Query: 77 VVYRGRLK-NNRLVAIKRFSRQSWPDP---HQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
VY R K + ++A+K + HQ E ++RH ++ L G +
Sbjct: 21 NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR 80
Query: 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRV 192
L+ +Y P T+ + L + +A AL +C+S+ ++ D+ +
Sbjct: 81 VYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENL 137
Query: 193 LFDEDGDPRLSSFGLMKNSRDGKSYSTN--LAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
L G+ +++ FG ++ + + L Y PPE + + ++S G + +
Sbjct: 138 LLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 197
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
L GK PP A S +E + + +L S+ L++ RP ++
Sbjct: 198 LVGK--PPFEANTYQE----TYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLRE 251
Query: 311 LLS 313
+L
Sbjct: 252 VLE 254
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (318), Expect = 7e-34
Identities = 42/250 (16%), Positives = 103/250 (41%), Gaps = 20/250 (8%)
Query: 77 VVYRGRLKN---NRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGD 131
V +G + + VA+K ++ + + EA + + + +V +IG C E +
Sbjct: 22 TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE 80
Query: 132 ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYR 191
+LV + L+K+L + + + + + + ++ + + ++ ++ DL A
Sbjct: 81 SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLE-ESNFVHRDLAARN 137
Query: 192 VLFDEDGDPRLSSFGLMKNSRDGKSYSTN-------LAYTPPEFLRTGRVIPESVIYSYG 244
VL ++S FGL K R ++Y + + PE + + +S ++S+G
Sbjct: 138 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 197
Query: 245 TVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKD 304
++ + S P ++G + +++ ++ +L + C Y+ ++
Sbjct: 198 VLMWEAFSYGQKPYRG----MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVEN 253
Query: 305 RPDVKFLLSA 314
RP +
Sbjct: 254 RPGFAAVELR 263
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (319), Expect = 9e-34
Identities = 45/247 (18%), Positives = 92/247 (37%), Gaps = 15/247 (6%)
Query: 77 VVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
VY+ + K + L A K +S + ++ E L + H +V L+ + +
Sbjct: 27 KVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWI 86
Query: 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD 195
+ ++ + + ++ PL V AL++ + ++ DL A +LF
Sbjct: 87 LIEFCAGGAVDAVMLELER-PLTESQIQVVCKQTLDALNYLHDNK-IIHRDLKAGNILFT 144
Query: 196 EDGDPRLSSFGLMKNSRDGKSYST----NLAYTPPEFLRT-----GRVIPESVIYSYGTV 246
DGD +L+ FG+ + + PE + ++ ++S G
Sbjct: 145 LDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 204
Query: 247 LLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306
L+++ + PP H L+ +R + + Q + + + KCL+ R
Sbjct: 205 LIEMAEIE--PPHHELNPMRVLLKIAKSEPPTLAQPSRWSS-NFKDFLKKCLEKNVDARW 261
Query: 307 DVKFLLS 313
LL
Sbjct: 262 TTSQLLQ 268
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (317), Expect = 3e-33
Identities = 55/259 (21%), Positives = 114/259 (44%), Gaps = 20/259 (7%)
Query: 77 VVYRGRLKNNR----LVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD 131
VY G L +N A+K +R + + QF+TE + + H +++L+G C +
Sbjct: 42 CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE 101
Query: 132 ER-LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
L+V YM + L ++ + + + +A+ + + + ++ DL A
Sbjct: 102 GSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGM-KFLASKKFVHRDLAAR 159
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN--------LAYTPPEFLRTGRVIPESVIYS 242
+ DE +++ FGL ++ D + S + + + E L+T + +S ++S
Sbjct: 160 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 219
Query: 243 YGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302
+G +L +L++ PP ++ LL L+ +Y + L E+ KC +A
Sbjct: 220 FGVLLWELMTRGA-PPYPDVNTFDITVYLLQGRRLLQPEYCPDP---LYEVMLKCWHPKA 275
Query: 303 KDRPDVKFLLSAVAPLQKQ 321
+ RP L+S ++ +
Sbjct: 276 EMRPSFSELVSRISAIFST 294
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (314), Expect = 4e-33
Identities = 55/249 (22%), Positives = 101/249 (40%), Gaps = 18/249 (7%)
Query: 77 VVYRGRLK---NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
V +G + VAIK + + D + + EA + + + +V LIG C + +
Sbjct: 24 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEA 82
Query: 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRV 192
+LV + L K L ++ +P + + ++ + + +N ++ DL A V
Sbjct: 83 LMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNF-VHRDLAARNV 140
Query: 193 LFDEDGDPRLSSFGLMKNSRDGKSYSTN-------LAYTPPEFLRTGRVIPESVIYSYGT 245
L ++S FGL K SY T L + PE + + S ++SYG
Sbjct: 141 LLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGV 200
Query: 246 VLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDR 305
+ + LS P ++G ++ ++ + E +L L S C Y+ +DR
Sbjct: 201 TMWEALSYGQKPYKK----MKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDR 256
Query: 306 PDVKFLLSA 314
PD +
Sbjct: 257 PDFLTVEQR 265
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (314), Expect = 5e-33
Identities = 48/242 (19%), Positives = 100/242 (41%), Gaps = 12/242 (4%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
VY + + VAI++ + Q P + E + ++ +VN + GDE +
Sbjct: 35 TVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 94
Query: 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD 195
V +Y+ +L+ + + + V QAL+ +S ++ D+ + +L
Sbjct: 95 VMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLG 150
Query: 196 EDGDPRLSSFGLMKNSRDGKSYSTN----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
DG +L+ FG +S + + PE + P+ I+S G + ++++
Sbjct: 151 MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFL 311
G+ PP + +R L+ + + E Q + + + ++CL + + R K L
Sbjct: 211 EGE--PPYLNENPLRALY-LIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL 267
Query: 312 LS 313
L
Sbjct: 268 LQ 269
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (312), Expect = 5e-33
Identities = 54/254 (21%), Positives = 95/254 (37%), Gaps = 26/254 (10%)
Query: 77 VVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
+ R K + +++ K S + V+E L ++H +V +
Sbjct: 19 RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNT 78
Query: 134 LL--VAQYMPNDTLSKHLFHWDK--QPLPWEMRVRVAYYIAQALDHCNSQNR---KLYH- 185
L V +Y L+ + K Q L E +RV + AL C+ ++ + H
Sbjct: 79 TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHR 138
Query: 186 DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIY 241
DL V D + +L FGL + S++ TP PE + +S I+
Sbjct: 139 DLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIW 198
Query: 242 SYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT---QLVELASKCL 298
S G +L +L + PP + L EG++ +L E+ ++ L
Sbjct: 199 SLGCLLYELCALM--PPFT------AFSQKELAGKIREGKFRRIPYRYSDELNEIITRML 250
Query: 299 QYEAKDRPDVKFLL 312
+ RP V+ +L
Sbjct: 251 NLKDYHRPSVEEIL 264
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (312), Expect = 9e-33
Identities = 56/264 (21%), Positives = 102/264 (38%), Gaps = 36/264 (13%)
Query: 77 VVYRGRLKN------NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAE 129
+VY G K VAIK + + + +F+ EA+ + +V L+G ++
Sbjct: 35 MVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 94
Query: 130 GDERLLVAQYMPNDTLSKHLFHWDK--------QPLPWEMRVRVAYYIAQALDHCNSQNR 181
G L++ + M L +L P +++A IA + + N+
Sbjct: 95 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF 154
Query: 182 KLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVI 235
++ DL A + ED ++ FG+ ++ + Y + + PE L+ G
Sbjct: 155 -VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 213
Query: 236 PESVIYSYGTVLLDLLSGKHIP-----PSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290
S ++S+G VL ++ + P L + LL D+ + L
Sbjct: 214 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD---------ML 264
Query: 291 VELASKCLQYEAKDRPDVKFLLSA 314
EL C QY K RP ++S+
Sbjct: 265 FELMRMCWQYNPKMRPSFLEIISS 288
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (310), Expect = 1e-32
Identities = 53/260 (20%), Positives = 104/260 (40%), Gaps = 19/260 (7%)
Query: 77 VVYRGRLKNN-----RLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEG 130
VY+G LK + VAIK F+ EA +G H ++ L G ++
Sbjct: 22 EVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY 81
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
+++ +YM N L K L D + V + IA + + + N + DL A
Sbjct: 82 KPMMIITEYMENGALDKFLREKDGE-FSVLQLVGMLRGIAAGMKYLANMNYV-HRDLAAR 139
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN-------LAYTPPEFLRTGRVIPESVIYSY 243
+L + + ++S FGL + D + + +T PE + + S ++S+
Sbjct: 140 NILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSF 199
Query: 244 GTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAK 303
G V+ ++++ P L ++ ++ + + + +L +C Q E
Sbjct: 200 GIVMWEVMTYGE-RPYWELSN---HEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERA 255
Query: 304 DRPDVKFLLSAVAPLQKQTE 323
RP ++S + L + +
Sbjct: 256 RRPKFADIVSILDKLIRAPD 275
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (311), Expect = 1e-32
Identities = 49/267 (18%), Positives = 102/267 (38%), Gaps = 27/267 (10%)
Query: 77 VVYRGRLKNN---RLVAIKRFSRQSWPDPHQ-FVTEAAGLGNV-RHKRLVNLIGCCAEGD 131
V + R+K + AIKR + D H+ F E L + H ++NL+G C
Sbjct: 25 QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 84
Query: 132 ERLLVAQYMPNDTLSKHL--------------FHWDKQPLPWEMRVRVAYYIAQALDHCN 177
L +Y P+ L L + L + + A +A+ +D+ +
Sbjct: 85 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 144
Query: 178 SQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN---LAYTPPEFLRTGRV 234
+ ++ DL A +L E+ +++ FGL + + + + E L
Sbjct: 145 QKQ-FIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVY 203
Query: 235 IPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294
S ++SYG +L +++S P + L + + ++ +L
Sbjct: 204 TTNSDVWSYGVLLWEIVSLGG-TPYCGMTC---AELYEKLPQGYRLEKPLNCDDEVYDLM 259
Query: 295 SKCLQYEAKDRPDVKFLLSAVAPLQKQ 321
+C + + +RP +L ++ + ++
Sbjct: 260 RQCWREKPYERPSFAQILVSLNRMLEE 286
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (309), Expect = 2e-32
Identities = 44/286 (15%), Positives = 98/286 (34%), Gaps = 46/286 (16%)
Query: 77 VVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD----E 132
V+RG+ + VA+K FS + E +RH+ ++ I + + +
Sbjct: 18 EVWRGKWRG-EEVAVKIFSSREERS-WFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75
Query: 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH------- 185
LV+ Y + +L +L ++ + E +++A A L H + +
Sbjct: 76 LWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 132
Query: 186 DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYST--------NLAYTPPEFLRT------ 231
DL + +L ++G ++ GL Y PE L
Sbjct: 133 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 192
Query: 232 GRVIPESVIYSYGTVLLDLLSGKHIPPSH---------------ALDVIRGKNLLLLMDS 276
+ IY+ G V ++ I H +++ +R +
Sbjct: 193 FESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRP 252
Query: 277 SLEGQYANEDATQ-LVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321
++ ++ + +A + + ++ +C R + ++ L +Q
Sbjct: 253 NIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 124 bits (311), Expect = 4e-32
Identities = 43/243 (17%), Positives = 84/243 (34%), Gaps = 10/243 (4%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
VV+R A K D E + +RH LVNL + +E ++
Sbjct: 41 VVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM 100
Query: 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF- 194
+ ++M L + + + + + V + + L H + N ++ DL ++F
Sbjct: 101 IYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFT 158
Query: 195 -DEDGDPRLSSFGLMKNSRDGKSYST---NLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+ +L FGL + +S + PE V + ++S G + L
Sbjct: 159 TKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL 218
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
LSG P + + D +++ + + + K L + R +
Sbjct: 219 LSGL--SPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQ 276
Query: 311 LLS 313
L
Sbjct: 277 ALE 279
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (304), Expect = 6e-32
Identities = 43/246 (17%), Positives = 78/246 (31%), Gaps = 15/246 (6%)
Query: 77 VVYRGRLK-NNRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134
V + VA+K + D P E + H+ +V G EG+ +
Sbjct: 20 EVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 79
Query: 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194
L +Y L + +P R + + + + + + D+ +L
Sbjct: 80 LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIGI-THRDIKPENLLL 136
Query: 195 DEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESV-IYSYGTVL 247
DE + ++S FGL R L Y PE L+ E V ++S G VL
Sbjct: 137 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 196
Query: 248 LDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPD 307
+L+G+ + + + + L+ K L R
Sbjct: 197 TAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL---HKILVENPSARIT 253
Query: 308 VKFLLS 313
+ +
Sbjct: 254 IPDIKK 259
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 119 bits (299), Expect = 3e-31
Identities = 39/248 (15%), Positives = 89/248 (35%), Gaps = 17/248 (6%)
Query: 77 VVYRGRLK-NNRLVAIKRFS--RQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
VY+G VA + + + +F EA L ++H +V +
Sbjct: 24 TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKG 83
Query: 134 ----LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLN 188
+LV + M + TL +L + + ++ I + L +++ + H DL
Sbjct: 84 KKCIVLVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLK 141
Query: 189 AYRVLF-DEDGDPRLSSFGLMKNSRDGKSYST--NLAYTPPEFLRTGRVIPESVIYSYGT 245
+ G ++ GL R + + + PE + +Y++G
Sbjct: 142 CDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGM 200
Query: 246 VLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDR 305
+L++ + ++ P S + + + + ++ E+ C++ +R
Sbjct: 201 CMLEMATSEY-PYSECQNA--AQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDER 257
Query: 306 PDVKFLLS 313
+K LL+
Sbjct: 258 YSIKDLLN 265
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 118 bits (297), Expect = 1e-30
Identities = 46/244 (18%), Positives = 83/244 (34%), Gaps = 11/244 (4%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134
V + +LVAIK ++++ E A L ++H +V L G
Sbjct: 24 EVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLY 83
Query: 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQN--RKLYHDLNAYRV 192
L+ Q + L + K R+ + + A+ + + + N
Sbjct: 84 LIMQLVSGGELFDRIVE--KGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYY 141
Query: 193 LFDEDGDPRLSSFGLMKNSRDGKSYST---NLAYTPPEFLRTGRVIPESVIYSYGTVLLD 249
DED +S FGL K G ST Y PE L +S G +
Sbjct: 142 SLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 201
Query: 250 LLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVK 309
LL G PP + + + +L + + Y ++ + + ++ + + R +
Sbjct: 202 LLCGY--PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCE 259
Query: 310 FLLS 313
L
Sbjct: 260 QALQ 263
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 118 bits (296), Expect = 1e-30
Identities = 55/277 (19%), Positives = 100/277 (36%), Gaps = 50/277 (18%)
Query: 77 VVYRGRLKN------NRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAE 129
V++ R +VA+K ++ D F EAA + + +V L+G CA
Sbjct: 28 RVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 87
Query: 130 GDERLLVAQYMPNDTLSKHLFHWDK----------------------QPLPWEMRVRVAY 167
G L+ +YM L++ L PL ++ +A
Sbjct: 88 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIAR 147
Query: 168 YIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------L 221
+A + + + + ++ DL L E+ +++ FGL +N Y + +
Sbjct: 148 QVAAGMAYLSERKF-VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPI 206
Query: 222 AYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP-----PSHALDVIRGKNLLLLMDS 276
+ PPE + R ES +++YG VL ++ S P + +R N+L ++
Sbjct: 207 RWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPEN 266
Query: 277 SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLS 313
+L L C DRP +
Sbjct: 267 CPL---------ELYNLMRLCWSKLPADRPSFCSIHR 294
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (297), Expect = 2e-30
Identities = 49/272 (18%), Positives = 97/272 (35%), Gaps = 39/272 (14%)
Query: 77 VVYRGRLKNNR------LVAIKRFSRQSWP-DPHQFVTEAAGLGNV-RHKRLVNLIGCCA 128
V VA+K ++ + ++E + + H+ +VNL+G C
Sbjct: 52 KVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 111
Query: 129 EGDERLLVAQYMPNDTLSKHLF---------------------HWDKQPLPWEMRVRVAY 167
L+ +Y L +L D L +E + AY
Sbjct: 112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAY 171
Query: 168 YIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------L 221
+A+ ++ ++ ++ DL A VL ++ FGL ++ +Y +
Sbjct: 172 QVAKGMEFLEFKS-CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPV 230
Query: 222 AYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQ 281
+ PE L G +S ++SYG +L ++ S P + V N L+ + +
Sbjct: 231 KWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGV-NPYPGIPVD--ANFYKLIQNGFKMD 287
Query: 282 YANEDATQLVELASKCLQYEAKDRPDVKFLLS 313
++ + C ++++ RP L S
Sbjct: 288 QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTS 319
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 119 bits (298), Expect = 2e-30
Identities = 37/243 (15%), Positives = 83/243 (34%), Gaps = 10/243 (4%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
VV+R R+ K + D + E + + + H +L+NL + E +L
Sbjct: 44 VVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 103
Query: 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD 195
+ +++ L + + + + + L H + + ++ D+ ++ +
Sbjct: 104 ILEFLSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMHEHSI-VHLDIKPENIMCE 161
Query: 196 EDGDPR--LSSFGLMKNSRDGKS---YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+ FGL + + + PE + V + +++ G + L
Sbjct: 162 TKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVL 221
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
LSG P D + + D + + + + + LQ E + R V
Sbjct: 222 LSGL--SPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHD 279
Query: 311 LLS 313
L
Sbjct: 280 ALE 282
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (291), Expect = 8e-30
Identities = 49/275 (17%), Positives = 94/275 (34%), Gaps = 37/275 (13%)
Query: 77 VVYRGRLK------NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNV-RHKRLVNLIGCCA 128
V VA+K + + ++E L + H +VNL+G C
Sbjct: 38 KVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT 97
Query: 129 EGDERLLVAQYMPNDTLSKHLFHW----------------DKQPLPWEMRVRVAYYIAQA 172
G L++ +Y L L D+ L E + +Y +A+
Sbjct: 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKG 157
Query: 173 LDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPP 226
+ S+N ++ DL A +L ++ FGL ++ ++ +Y + + P
Sbjct: 158 MAFLASKNC-IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 216
Query: 227 EFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANED 286
E + ES ++SYG L +L S P ++
Sbjct: 217 ESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD---SKFYKMIKEGFRMLSPEHA 273
Query: 287 ATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321
++ ++ C + RP K ++ ++KQ
Sbjct: 274 PAEMYDIMKTCWDADPLKRPTFKQIVQL---IEKQ 305
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 115 bits (289), Expect = 1e-29
Identities = 46/255 (18%), Positives = 87/255 (34%), Gaps = 23/255 (9%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPDPHQ---FVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
V R L +R AIK ++ ++ E + + H V L + ++
Sbjct: 23 TVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEK 82
Query: 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRV 192
Y N L K++ I AL++ + + ++ DL +
Sbjct: 83 LYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENI 139
Query: 193 LFDEDGDPRLSSFGLMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTV 246
L +ED +++ FG K S+ Y PE L S +++ G +
Sbjct: 140 LLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCI 199
Query: 247 LLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT--QLVELASKCLQYEAKD 304
+ L++G PP R N L+ ++ +Y + + +L K L +A
Sbjct: 200 IYQLVAGL--PP------FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 251
Query: 305 RPDVKFLLSAVAPLQ 319
R + +
Sbjct: 252 RLGCEEMEGYGPLKA 266
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 115 bits (290), Expect = 2e-29
Identities = 39/242 (16%), Positives = 92/242 (38%), Gaps = 11/242 (4%)
Query: 77 VVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
+V+R + + K + D E + L RH+ +++L +E ++
Sbjct: 20 IVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVM 78
Query: 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD 195
+ +++ + + + + L V + + +AL +S N + D+ +++
Sbjct: 79 IFEFISGLDIFERI-NTSAFELNEREIVSYVHQVCEALQFLHSHNI-GHFDIRPENIIYQ 136
Query: 196 EDGDPR--LSSFGLMKNSRDGKSYSTN---LAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+ FG + + G ++ Y PE + V + ++S GT++ L
Sbjct: 137 TRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVL 196
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
LSG P A + ++ + + + + E + + ++ + L E K R
Sbjct: 197 LSGI--NPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASE 254
Query: 311 LL 312
L
Sbjct: 255 AL 256
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 114 bits (285), Expect = 3e-29
Identities = 50/261 (19%), Positives = 88/261 (33%), Gaps = 34/261 (13%)
Query: 77 VVYRGRLK----NNRLVAIKRFSRQSWPDP---HQFVTEAAGLGNVRHKRLVNLIGCCAE 129
VV RG VA+K P F+ E + ++ H+ L+ L G
Sbjct: 23 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT 82
Query: 130 GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNA 189
+ +V + P +L + R A +A+ + + S+ ++ DL A
Sbjct: 83 PPMK-MVTELAPLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-IHRDLAA 139
Query: 190 YRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN-------LAYTPPEFLRTGRVIPESVIYS 242
+L ++ FGLM+ + A+ PE L+T S +
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 243 YGTVLLDLLSGKHIP-----PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKC 297
+G L ++ + P S L I + L + + +C
Sbjct: 200 FGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC--------PQDIYNVMVQC 251
Query: 298 LQYEAKDRPD----VKFLLSA 314
++ +DRP FLL A
Sbjct: 252 WAHKPEDRPTFVALRDFLLEA 272
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 114 bits (287), Expect = 3e-29
Identities = 46/259 (17%), Positives = 95/259 (36%), Gaps = 19/259 (7%)
Query: 77 VVYRGRLKNN-----RLVAIKRFSRQSWPDPH-QFVTEAAGLGNVRHKRLVNLIGCCAEG 130
VY+G VAIK + P + + + EA + +V + + L+G C
Sbjct: 24 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS 83
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
+L+ Q MP L + K + + + IA+ +++ R ++ DL A
Sbjct: 84 TVQLIT-QLMPFGCLLDY-VREHKDNIGSQYLLNWCVQIAKGMNYLE-DRRLVHRDLAAR 140
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYG 244
VL +++ FGL K + + + E + +S ++SYG
Sbjct: 141 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 200
Query: 245 TVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKD 304
+ +L++ P I + +++ + + KC +A
Sbjct: 201 VTVWELMTFGSKPYDG----IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADS 256
Query: 305 RPDVKFLLSAVAPLQKQTE 323
RP + L+ + + + +
Sbjct: 257 RPKFRELIIEFSKMARDPQ 275
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 113 bits (283), Expect = 5e-29
Identities = 48/258 (18%), Positives = 99/258 (38%), Gaps = 17/258 (6%)
Query: 77 VVYRGRLKNN----RLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGD 131
V++G + VAIK + +F+ EA + H +V LIG E +
Sbjct: 22 DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N 80
Query: 132 ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYR 191
++ + L + K L + AY ++ AL + S+ ++ D+ A
Sbjct: 81 PVWIIMELCTLGEL-RSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF-VHRDIAARN 138
Query: 192 VLFDEDGDPRLSSFGLMKNSRDGKSYSTN-----LAYTPPEFLRTGRVIPESVIYSYGTV 246
VL + +L FGL + D Y + + + PE + R S ++ +G
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 198
Query: 247 LLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306
+ ++L P ++ +++ +++ L L +KC Y+ RP
Sbjct: 199 MWEILMHGVKPFQG----VKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRP 254
Query: 307 DVKFLLSAVAPLQKQTEV 324
L + ++ + ++ +
Sbjct: 255 RFTELKAQLSTILEEEKA 272
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 112 bits (281), Expect = 1e-28
Identities = 49/245 (20%), Positives = 87/245 (35%), Gaps = 20/245 (8%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPDP---HQFVTEAAGLGNVRHKRLVNLIGCCAE--- 129
V+ R L+ +R VA+K DP +F EA + H +V +
Sbjct: 22 EVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP 81
Query: 130 -GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLN 188
G +V +Y+ TL + P+ + + V QAL+ + ++ D+
Sbjct: 82 AGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGI-IHRDVK 138
Query: 189 AYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNL-------AYTPPEFLRTGRVIPESVIY 241
++ ++ FG+ + D + T Y PE R V S +Y
Sbjct: 139 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 198
Query: 242 SYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYE 301
S G VL ++L+G+ PP + + D + L + K L
Sbjct: 199 SLGCVLYEVLTGE--PPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKN 256
Query: 302 AKDRP 306
++R
Sbjct: 257 PENRY 261
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 109 bits (274), Expect = 1e-27
Identities = 38/251 (15%), Positives = 82/251 (32%), Gaps = 19/251 (7%)
Query: 77 VVYRGRLK-NNRLVAIKRFSRQSWPDPHQ------FVTEAAGLGNVRHKRLVNLIGCCAE 129
VV + R K A K ++ + E + L ++H ++ L
Sbjct: 25 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 84
Query: 130 GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNA 189
+ +L+ + + L +K+ L E I + + + + DL
Sbjct: 85 KTDVILILELVAGGELFDF--LAEKESLTEEEATEFLKQILNGV-YYLHSLQIAHFDLKP 141
Query: 190 YRVLFDEDGDPR----LSSFGLMKNSRDGKSYSTNL---AYTPPEFLRTGRVIPESVIYS 242
++ + P+ + FGL G + + PE + + E+ ++S
Sbjct: 142 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 201
Query: 243 YGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302
G + LLSG + ++ E +Y + + + + L +
Sbjct: 202 IGVITYILLSGASPFLGDTKQETLAN--VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDP 259
Query: 303 KDRPDVKFLLS 313
K R ++ L
Sbjct: 260 KKRMTIQDSLQ 270
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 109 bits (272), Expect = 2e-27
Identities = 52/250 (20%), Positives = 98/250 (39%), Gaps = 27/250 (10%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPDPH------QFVTEAAGLGNVR--HKRLVNLIGCC 127
VY G + +N VAIK + D + E L V ++ L+
Sbjct: 19 SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 78
Query: 128 AEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDL 187
D +L+ + ++ L E+ + + +A+ HC++ L+ D+
Sbjct: 79 ERPDSFVLILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEAVRHCHNCG-VLHRDI 136
Query: 188 NAYRVLFDED-GDPRLSSFGLMKNSRDG--KSYSTNLAYTPPEFLRTGRVIPESV-IYSY 243
+L D + G+ +L FG +D + Y+PPE++R R S ++S
Sbjct: 137 KDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196
Query: 244 GTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAK 303
G +L D++ G P H ++IRG+ + + +++ L CL
Sbjct: 197 GILLYDMVCGDI-PFEHDEEIIRGQ---VFFRQRV--------SSECQHLIRWCLALRPS 244
Query: 304 DRPDVKFLLS 313
DRP + + +
Sbjct: 245 DRPTFEEIQN 254
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 108 bits (271), Expect = 3e-27
Identities = 43/257 (16%), Positives = 86/257 (33%), Gaps = 25/257 (9%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPDP---------HQFVTEAAGLGNVR-HKRLVNLIG 125
VV R + A+K + E L V H ++ L
Sbjct: 18 VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD 77
Query: 126 CCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH 185
LV M L +L K L + ++ + + + + N ++
Sbjct: 78 TYETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN-IVHR 134
Query: 186 DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYST---NLAYTPPEFLRTGRVI------P 236
DL +L D+D + +L+ FG G+ +Y PE +
Sbjct: 135 DLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGK 194
Query: 237 ESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296
E ++S G ++ LL+G PP + +++ + ++ + + +L S+
Sbjct: 195 EVDMWSTGVIMYTLLAGS--PPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR 252
Query: 297 CLQYEAKDRPDVKFLLS 313
L + + R + L+
Sbjct: 253 FLVVQPQKRYTAEEALA 269
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 108 bits (270), Expect = 2e-26
Identities = 47/240 (19%), Positives = 82/240 (34%), Gaps = 16/240 (6%)
Query: 77 VVYRGRLK-NNRLVAIKRFSRQSWPDPHQ------FVTEAAGLGNVRHKRLVNLIGCCAE 129
VY R ++ A+K ++ + + +V +
Sbjct: 19 EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT 78
Query: 130 GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNA 189
D+ + M L HL A I L+H +++ +Y DL
Sbjct: 79 PDKLSFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRFV-VYRDLKP 135
Query: 190 YRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN--LAYTPPEFLRTGRVIPESV-IYSYGTV 246
+L DE G R+S GL + K +++ Y PE L+ G S +S G +
Sbjct: 136 ANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCM 195
Query: 247 LLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306
L LL G H + K+ + M ++ + + + +L L LQ + R
Sbjct: 196 LFKLLRGHSPFRQHKT---KDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRL 252
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 106 bits (265), Expect = 4e-26
Identities = 46/244 (18%), Positives = 81/244 (33%), Gaps = 22/244 (9%)
Query: 77 VVYRGRLK-NNRLVAIKRFSRQSWPDP---HQFVTEAAGLG-NVRHKRLVNLIGCCAEGD 131
V+ K N+ AIK + + E L H L ++ +
Sbjct: 17 KVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE 76
Query: 132 ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYR 191
V +Y+ L H+ A I L +S+ +Y DL
Sbjct: 77 NLFFVMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKGI-VYRDLKLDN 133
Query: 192 VLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA----YTPPEFLRTGRVIPESVIYSYGTVL 247
+L D+DG +++ FG+ K + G + + Y PE L + +S+G +L
Sbjct: 134 ILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLL 193
Query: 248 LDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANED--ATQLVELASKCLQYEAKDR 305
++L G+ G++ L S + +L K E + R
Sbjct: 194 YEMLIGQSPFH--------GQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKR 245
Query: 306 PDVK 309
V+
Sbjct: 246 LGVR 249
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (262), Expect = 6e-26
Identities = 47/271 (17%), Positives = 96/271 (35%), Gaps = 33/271 (12%)
Query: 77 VVYRGRLK------NNRLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHKR-LVNLIGCCA 128
V R VA+K + H+ ++E L ++ H +VNL+G C
Sbjct: 28 QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 87
Query: 129 E-GDERLLVAQYMPNDTLSKHLFH--------------WDKQPLPWEMRVRVAYYIAQAL 173
+ G +++ ++ LS +L K L E + ++ +A+ +
Sbjct: 88 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGM 147
Query: 174 DHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPE 227
+ S+ ++ DL A +L E ++ FGL ++ Y L + PE
Sbjct: 148 EFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 206
Query: 228 FLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287
+ +S ++S+G +L ++ S P + + + +
Sbjct: 207 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID---EEFCRRLKEGTRMRAPDYTT 263
Query: 288 TQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318
++ + C E RP L+ + L
Sbjct: 264 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 294
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (261), Expect = 2e-25
Identities = 50/273 (18%), Positives = 94/273 (34%), Gaps = 37/273 (13%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134
+V N VAIK+ S + + E L RH+ ++ +
Sbjct: 23 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 82
Query: 135 LVAQYMPNDTLSKHLFHW-DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVL 193
+ Y+ + L+ Q L + Y I + L + +S N L+ DL +L
Sbjct: 83 MKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV-LHRDLKPSNLL 141
Query: 194 FDEDGDPRLSSFGLMKNSRDGKSYST-------NLAYTPPEFLRTGRVIPESV-IYSYGT 245
+ D ++ FGL + + ++ Y PE + + +S+ I+S G
Sbjct: 142 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 201
Query: 246 VLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA------------------ 287
+L ++LS + I P L +L S E +
Sbjct: 202 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWN 261
Query: 288 -------TQLVELASKCLQYEAKDRPDVKFLLS 313
++ ++L K L + R +V+ L+
Sbjct: 262 RLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 294
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 104 bits (259), Expect = 2e-25
Identities = 43/237 (18%), Positives = 87/237 (36%), Gaps = 18/237 (7%)
Query: 77 VVYRGRLK-NNRLVAIKRFSRQSWPDPHQ---FVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
V+ R + N R A+K ++ Q E L V H ++ + G + +
Sbjct: 19 RVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQ 78
Query: 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRV 192
++ Y+ L Q P + A + AL++ +S++ +Y DL +
Sbjct: 79 IFMIMDYIEGGEL--FSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENI 135
Query: 193 LFDEDGDPRLSSFGLMKNSRD-GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
L D++G +++ FG K D + Y PE + T +S+G ++ ++L
Sbjct: 136 LLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEML 195
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT--QLVELASKCLQYEAKDRP 306
+G N + + L + + +L S+ + + R
Sbjct: 196 AGYTPFY--------DSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRL 244
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 101 bits (252), Expect = 1e-24
Identities = 49/266 (18%), Positives = 98/266 (36%), Gaps = 35/266 (13%)
Query: 77 VVYRGRLK--------NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNV-RHKRLVNLIGC 126
V VA+K + D ++E + + +HK ++NL+G
Sbjct: 28 QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA 87
Query: 127 CAEGDERLLVAQYMPNDTLSKHLFHW--------------DKQPLPWEMRVRVAYYIAQA 172
C + ++ +Y L ++L ++ L + V AY +A+
Sbjct: 88 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARG 147
Query: 173 LDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPP 226
+++ S+ ++ DL A VL ED +++ FGL ++ Y + + P
Sbjct: 148 MEYLASKK-CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 206
Query: 227 EFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANED 286
E L +S ++S+G +L ++ + P + V + L L+ +
Sbjct: 207 EALFDRIYTHQSDVWSFGVLLWEIFTLGG-SPYPGVPV---EELFKLLKEGHRMDKPSNC 262
Query: 287 ATQLVELASKCLQYEAKDRPDVKFLL 312
+L + C RP K L+
Sbjct: 263 TNELYMMMRDCWHAVPSQRPTFKQLV 288
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 100 bits (249), Expect = 2e-24
Identities = 42/267 (15%), Positives = 93/267 (34%), Gaps = 33/267 (12%)
Query: 77 VVYRGRLKNNRLVAIK--RFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134
VVY+ + A+K R ++ P + E + L ++H +V L +
Sbjct: 17 VVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLV 76
Query: 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194
LV +++ D L + L + + +C+ + L+ DL +L
Sbjct: 77 LVFEHLDQDLK--KLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLI 133
Query: 195 DEDGDPRLSSFGLMKNSRDG----KSYSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLLD 249
+ +G+ +++ FGL + L Y P+ L + ++ I+S G + +
Sbjct: 134 NREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAE 193
Query: 250 LLSGKHIPPS-----------------------HALDVIRGKNLLLLMDSSLEGQYANED 286
+++G + P + ++ + + + +
Sbjct: 194 MVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGL 253
Query: 287 ATQLVELASKCLQYEAKDRPDVKFLLS 313
++L SK L+ + R K L
Sbjct: 254 DESGIDLLSKMLKLDPNQRITAKQALE 280
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 99.5 bits (247), Expect = 6e-24
Identities = 41/260 (15%), Positives = 81/260 (31%), Gaps = 33/260 (12%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIG-CCAEGDERL 134
+Y G + VAIK ++ Q E+ ++ + I C AEGD +
Sbjct: 22 DIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 79
Query: 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194
+V + + LF++ + + + +A + +++ +S+N ++ D+ L
Sbjct: 80 MVMELLGPSLE--DLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLM 136
Query: 195 DEDGDPRL---SSFGLMKNSRDGKSYSTN-----------LAYTPPEFLRTGRVIPESVI 240
L FGL K RD +++ Y +
Sbjct: 137 GLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDL 196
Query: 241 YSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT-------QLVEL 293
S G VL+ G + + E + + +
Sbjct: 197 ESLGYVLMYFNLGSLPWQGL-----KAATKRQKYERISEKKMSTPIEVLCKGYPSEFATY 251
Query: 294 ASKCLQYEAKDRPDVKFLLS 313
+ C D+PD +L
Sbjct: 252 LNFCRSLRFDDKPDYSYLRQ 271
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.8 bits (245), Expect = 1e-23
Identities = 51/269 (18%), Positives = 87/269 (32%), Gaps = 36/269 (13%)
Query: 77 VVYRGRLKN-NRLVAIKRFSRQSWPD-----PHQFVTEAAGLGNVRHKRLVNLIGCCAEG 130
VY+ R KN N++VAIK+ + + E L + H ++ L+
Sbjct: 13 TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK 72
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
LV +M D + + L Q L++ + L+ DL
Sbjct: 73 SNISLVFDFMETDLE--VIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWI-LHRDLKPN 129
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA----YTPPEFLRTGRVIPESV-IYSYGT 245
+L DE+G +L+ FGL K+ T+ Y PE L R+ V +++ G
Sbjct: 130 NLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGC 189
Query: 246 VLLDLLSGKHIPPSHA--------LDVIRGKNLLLLMDSSLEGQYANEDAT--------- 288
+L +LL P + + + D Y +
Sbjct: 190 ILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIF 249
Query: 289 -----QLVELASKCLQYEAKDRPDVKFLL 312
L++L + R L
Sbjct: 250 SAAGDDLLDLIQGLFLFNPCARITATQAL 278
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.9 bits (240), Expect = 6e-23
Identities = 56/268 (20%), Positives = 104/268 (38%), Gaps = 33/268 (12%)
Query: 77 VVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
VVY+ R K +VA+K+ + + P + E + L + H +V L+ ++
Sbjct: 17 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 76
Query: 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVL 193
LV +++ D L K + +P + + + Q L C+S +R L+ DL +L
Sbjct: 77 YLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-HRVLHRDLKPQNLL 134
Query: 194 FDEDGDPRLSSFGLMK----NSRDGKSYSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLL 248
+ +G +L+ FGL + R L Y PE L + +V I+S G +
Sbjct: 135 INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 194
Query: 249 DLLSGKHI-PPSHALDVIR--GKNLLLLMDSSLEGQYANED------------------- 286
++++ + + P +D + + L + G + D
Sbjct: 195 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 254
Query: 287 -ATQLVELASKCLQYEAKDRPDVKFLLS 313
L S+ L Y+ R K L+
Sbjct: 255 LDEDGRSLLSQMLHYDPNKRISAKAALA 282
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.9 bits (238), Expect = 2e-22
Identities = 42/251 (16%), Positives = 84/251 (33%), Gaps = 20/251 (7%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCC----AEG 130
V + + A+K D + E + +V ++ A
Sbjct: 27 KVLQIFNKRTQEKFALKMLQ-----DCPKARREVELHWRASQCPHIVRIVDVYENLYAGR 81
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
L+V + + L + Q + I +A+ + +S N + D+
Sbjct: 82 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI-AHRDVKPE 140
Query: 191 RVLFD---EDGDPRLSSFGLMKNSRDGKSYSTN---LAYTPPEFLRTGRVIPESVIYSYG 244
+L+ + +L+ FG K + S +T Y PE L + ++S G
Sbjct: 141 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 200
Query: 245 TVLLDLLSGKHIPPS-HALDVIRG-KNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302
++ LL G S H L + G K + + +E + ++ L L+ E
Sbjct: 201 VIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEP 260
Query: 303 KDRPDVKFLLS 313
R + ++
Sbjct: 261 TQRMTITEFMN 271
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.6 bits (234), Expect = 4e-22
Identities = 47/272 (17%), Positives = 87/272 (31%), Gaps = 36/272 (13%)
Query: 77 VVYRGRLK--NNRLVAIKRFSRQSWPD--PHQFVTEAA---GLGNVRHKRLVNLIGCCAE 129
V++ R R VA+KR Q+ + P + E A L H +V L C
Sbjct: 22 KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTV 81
Query: 130 GDERLLVAQYMPNDTLS----KHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH 185
+ + + +L + +P E + + + + LD +S ++
Sbjct: 82 SRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRV-VHR 140
Query: 186 DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN---LAYTPPEFLRTGRVIPESVIYS 242
DL +L G +L+ FGL + + ++ L Y PE L ++S
Sbjct: 141 DLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWS 200
Query: 243 YGTVLLDLLSGKHI---------------------PPSHALDVIRGKNLLLLMDSSLEGQ 281
G + ++ K + DV + + +
Sbjct: 201 VGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEK 260
Query: 282 YANEDATQLVELASKCLQYEAKDRPDVKFLLS 313
+ + +L KCL + R LS
Sbjct: 261 FVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 93.7 bits (232), Expect = 7e-22
Identities = 39/257 (15%), Positives = 70/257 (27%), Gaps = 25/257 (9%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKR-LVNLIGCCAEGDERL 134
V++ G L NN+ VAIK R+S D Q E + + N+ EG +
Sbjct: 20 VIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV 77
Query: 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194
LV + L + + A + + + ++ +Y D+ L
Sbjct: 78 LVIDLLGPSLE--DLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSL-VYRDIKPDNFLI 134
Query: 195 DE-----DGDPRLSSFGLMKNSRDGKSYSTN-----------LAYTPPEFLRTGRVIPES 238
+ FG++K RD + Y
Sbjct: 135 GRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRD 194
Query: 239 VIYSYGTVLLDLLSGKHIPP-SHALDVIRGKNLLLLMDSSLEGQYANED-ATQLVELASK 296
+ + G V + L G A + + S + + +
Sbjct: 195 DLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHY 254
Query: 297 CLQYEAKDRPDVKFLLS 313
PD +L
Sbjct: 255 ARNLAFDATPDYDYLQG 271
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.1 bits (233), Expect = 9e-22
Identities = 44/269 (16%), Positives = 90/269 (33%), Gaps = 33/269 (12%)
Query: 77 VVYRGR-LKNNRLVAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
V + VAIK+ R QS + E L ++RH+ ++ L+ +
Sbjct: 33 AVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL 92
Query: 134 LLVAQYMPNDTLSKHLFH--WDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYR 191
+ + L + + Y + + L + ++ + DL
Sbjct: 93 DDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGII-HRDLKPGN 151
Query: 192 VLFDEDGDPRLSSFGLMKNSRDG-KSYSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLLD 249
+ +ED + ++ FGL + + Y Y PE + ++V I+S G ++ +
Sbjct: 152 LAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAE 211
Query: 250 LLSGKHI-------------------PPSHALDVIRGKNLLLLMDSSLE------GQYAN 284
+++GK + PP+ + ++ M E
Sbjct: 212 MITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILT 271
Query: 285 EDATQLVELASKCLQYEAKDRPDVKFLLS 313
+ V L K L +A+ R L+
Sbjct: 272 NASPLAVNLLEKMLVLDAEQRVTAGEALA 300
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.7 bits (232), Expect = 1e-21
Identities = 52/274 (18%), Positives = 89/274 (32%), Gaps = 43/274 (15%)
Query: 77 VVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER-- 133
VVY+ +L + LVAIK+ + D E + + H +V L E+
Sbjct: 35 VVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKD 90
Query: 134 ----LLVAQYMPNDTLSKHLFHW-DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DL 187
LV Y+P + KQ LP Y + ++L + +S + H D+
Sbjct: 91 EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDI 148
Query: 188 NAYRVLFDEDG-DPRLSSFGLMKNSRDGKSYSTNLAYT----PPEFLRTGRVIPESVIYS 242
+L D D +L FG K G+ + + P ++S
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 243 YGTVLLDLLSGKHIPPSHALDVIRGKNLLLL-----------------------MDSSLE 279
G VL +LL G+ I P + + + +L
Sbjct: 209 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 268
Query: 280 GQYANEDATQLVELASKCLQYEAKDRPDVKFLLS 313
+ + + L S+ L+Y R +
Sbjct: 269 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.9 bits (230), Expect = 2e-21
Identities = 48/240 (20%), Positives = 82/240 (34%), Gaps = 21/240 (8%)
Query: 77 VVYRGRLK-NNRLVAIKRFSRQSWPDP---HQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
V R K R A+K ++ VTE+ L N RH L L D
Sbjct: 20 KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDR 79
Query: 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRV 192
V +Y L HL + E I AL++ +S++ +Y D+ +
Sbjct: 80 LCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDV-VYRDIKLENL 136
Query: 193 LFDEDGDPRLSSFGLMKNSRDGKSYSTNLA----YTPPEFLRTGRVIPESVIYSYGTVLL 248
+ D+DG +++ FGL K + Y PE L + G V+
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 196
Query: 249 DLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA--TQLVELASKCLQYEAKDRP 306
+++ G+ ++ L + L + + L + L+ + K R
Sbjct: 197 EMMCGRLPFY--------NQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRL 248
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.7 bits (229), Expect = 2e-21
Identities = 52/283 (18%), Positives = 93/283 (32%), Gaps = 49/283 (17%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
V++ R K + VA+K+ ++ + P + E L ++H+ +VNLI C
Sbjct: 25 EVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASP 84
Query: 134 --------LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH 185
LV + +D L RV + L + + L+
Sbjct: 85 YNRCKGSIYLVFDFCEHDLA--GLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHR 141
Query: 186 DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN--------LAYTPPEFLRTGRVIPE 237
D+ A VL DG +L+ FGL + K+ N L Y PPE L R
Sbjct: 142 DMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGP 201
Query: 238 SV-IYSYGTVLLDLLSGKHI-------------------PPSHALDVIRGKNLLLLMDSS 277
+ ++ G ++ ++ + I + L ++
Sbjct: 202 PIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELV 261
Query: 278 LEGQYANEDA-------TQLVELASKCLQYEAKDRPDVKFLLS 313
+ +D ++L K L + R D L+
Sbjct: 262 KGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 304
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.5 bits (213), Expect = 2e-19
Identities = 45/269 (16%), Positives = 93/269 (34%), Gaps = 35/269 (13%)
Query: 77 VVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
V++ + + + +VA+KR + P + E L ++HK +V L +
Sbjct: 17 TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKL 76
Query: 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVL 193
LV ++ D F L E+ + + + L C+S+N L+ DL +L
Sbjct: 77 TLVFEFCDQDLK--KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV-LHRDLKPQNLL 133
Query: 194 FDEDGDPRLSSFGLMKNSRDGKSYSTN----LAYTPPEFLRTGRVIPESV-IYSYGTVLL 248
+ +G+ +L++FGL + + L Y PP+ L ++ S+ ++S G +
Sbjct: 134 INRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA 193
Query: 249 DLLSGKHIP------------------------PSHALDVIRGKNLLLLMDSSLEGQYAN 284
+L + + K + ++
Sbjct: 194 ELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVP 253
Query: 285 EDATQLVELASKCLQYEAKDRPDVKFLLS 313
+ +L L+ R + L
Sbjct: 254 KLNATGRDLLQNLLKCNPVQRISAEEALQ 282
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 87.6 bits (216), Expect = 2e-19
Identities = 40/235 (17%), Positives = 82/235 (34%), Gaps = 14/235 (5%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPDP---HQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
V + ++ A+K +Q + E L V LV L +
Sbjct: 56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 115
Query: 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRV 192
+V +Y+ + HL A I ++ +S + +Y DL +
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENL 172
Query: 193 LFDEDGDPRLSSFGLMKNSRD-GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
L D+ G +++ FG K + + PE + + ++ G ++ ++
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306
+G PP A I+ + S + ++ + ++ L +L LQ + R
Sbjct: 233 AGY--PPFFADQPIQ----IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 281
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.8 bits (201), Expect = 1e-17
Identities = 48/246 (19%), Positives = 82/246 (33%), Gaps = 21/246 (8%)
Query: 77 VVYRGRL----KNNRLVAIKRFSRQSWPD----PHQFVTEAAGLGNVRHKR-LVNLIGCC 127
V+ R +L A+K + + TE L ++R LV L
Sbjct: 39 KVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF 98
Query: 128 AEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDL 187
+ L+ Y+ L HL + I AL+H + +Y D+
Sbjct: 99 QTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDI 155
Query: 188 NAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN-----LAYTPPEFLRTGR--VIPESVI 240
+L D +G L+ FGL K ++ + Y P+ +R G
Sbjct: 156 KLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDW 215
Query: 241 YSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQY 300
+S G ++ +LL+G P + + E Y E + +L + L
Sbjct: 216 WSLGVLMYELLTGA--SPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMK 273
Query: 301 EAKDRP 306
+ K R
Sbjct: 274 DPKKRL 279
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.2 bits (194), Expect = 1e-16
Identities = 48/270 (17%), Positives = 92/270 (34%), Gaps = 35/270 (12%)
Query: 77 VVYRGR-LKNNRLVAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
V K VA+K+ SR QS + E L +++H+ ++ L+
Sbjct: 33 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL 92
Query: 134 LLVAQYMPNDTLSKHLFH--WDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYR 191
L + Q L + + Y I + L + +S + + DL
Sbjct: 93 EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII-HRDLKPSN 151
Query: 192 VLFDEDGDPRLSSFGL-MKNSRDGKSYSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLLD 249
+ +ED + ++ FGL + Y Y PE + ++V I+S G ++ +
Sbjct: 152 LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 211
Query: 250 LLSGKH-------------------IPPSHALDVIRGKNLLLLMDS-------SLEGQYA 283
LL+G+ P + L I ++ + S + +
Sbjct: 212 LLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFI 271
Query: 284 NEDATQLVELASKCLQYEAKDRPDVKFLLS 313
+ V+L K L ++ R L+
Sbjct: 272 GANP-LAVDLLEKMLVLDSDKRITAAQALA 300
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 77.2 bits (189), Expect = 4e-16
Identities = 48/278 (17%), Positives = 96/278 (34%), Gaps = 50/278 (17%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDERL 134
V+ + NN V +K + E L N+R ++ L + R
Sbjct: 50 EVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 106
Query: 135 --LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRV 192
LV +++ N + Q L Y I +ALD+C+S + D+ + V
Sbjct: 107 PALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIM-HRDVKPHNV 160
Query: 193 LFD-EDGDPRLSSFGLMKNSRDGKSYSTN---LAYTPPEFLRTGRVIPESV-IYSYGTVL 247
+ D E RL +GL + G+ Y+ + PE L ++ S+ ++S G +L
Sbjct: 161 MIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 220
Query: 248 LDLLSGKH--------------------------------IPPSHALDVIRGKNLLLLMD 275
++ K I + I G++ +
Sbjct: 221 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 280
Query: 276 SSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLS 313
+ + + + + ++ K L+Y+ + R + +
Sbjct: 281 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 72.4 bits (176), Expect = 2e-14
Identities = 42/300 (14%), Positives = 93/300 (31%), Gaps = 65/300 (21%)
Query: 77 VVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
V+ + + NN VA+K R E L V A +LL
Sbjct: 28 TVWLAKDMVNNTHVAMKIV-RGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLL 86
Query: 136 VAQYMPNDTLSKHLFHW--------------DKQPLPWEMRVRVAYYIAQALDHCNSQNR 181
+ + + + +P +++ + LD+ + +
Sbjct: 87 DHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG 146
Query: 182 KLYHDLNAYRVLFDEDGDP------RLSSFGLMKNSRDGKSYS-TNLAYTPPEFLRTGRV 234
++ D+ VL + P +++ G + + S Y PE L
Sbjct: 147 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPW 206
Query: 235 IPESVIYSYGTVLLDLLSGKHI-------------------------PPSHAL------- 262
+ I+S ++ +L++G + PS+ L
Sbjct: 207 GCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTR 266
Query: 263 ----------DVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLL 312
++ + K L + + +++ ++A ++ + S LQ + + R D L+
Sbjct: 267 TFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLV 326
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.9 bits (175), Expect = 3e-14
Identities = 45/285 (15%), Positives = 87/285 (30%), Gaps = 54/285 (18%)
Query: 77 VVYRGR-LKNNRLVAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA----- 128
+V +R VAIK+ SR Q+ + E + V HK +++L+
Sbjct: 32 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 91
Query: 129 -EGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDL 187
E + LV + M + E + Y + + H +S ++ DL
Sbjct: 92 EEFQDVYLVMELMDANLCQVIQMEL-----DHERMSYLLYQMLCGIKHLHSAGI-IHRDL 145
Query: 188 NAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN---LAYTPPEFLRTGRVIPESVIYSYG 244
++ D ++ FGL + + + Y PE + I+S G
Sbjct: 146 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 205
Query: 245 TVLLDLLSGKHI----PPSHALDVI--------------------------------RGK 268
++ +++ K + + +
Sbjct: 206 CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFP 265
Query: 269 NLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLS 313
L + ++ A+Q +L SK L + R V L
Sbjct: 266 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 310
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 47.1 bits (111), Expect = 1e-06
Identities = 19/147 (12%), Positives = 37/147 (25%), Gaps = 25/147 (17%)
Query: 77 VVYRGRLKNNRLVAIK--RFSRQS--------WPDPHQFVTEAAGLGNVRHKRLVNLIGC 126
V+ + +K + S F A + L L G
Sbjct: 15 AVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGL 74
Query: 127 CA----EGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRK 182
+ ++ + + L + V I + +
Sbjct: 75 AVPKVYAWEGNAVLMELIDAKELYRVRVENPD---------EVLDMILEEVAKFY-HRGI 124
Query: 183 LYHDLNAYRVLFDEDGDPRLSSFGLMK 209
++ DL+ Y VL E+G + F
Sbjct: 125 VHGDLSQYNVLVSEEG-IWIIDFPQSV 150
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 497 | |||
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.9 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.84 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.81 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.8 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.77 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.75 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.75 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.74 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.73 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.72 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.71 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.71 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.69 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.68 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.67 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.66 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.66 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.64 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 99.64 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.63 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.63 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.62 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.62 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.61 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.6 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.59 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 99.58 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.58 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.56 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.53 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.48 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.47 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 99.42 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.35 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.28 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 99.26 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 99.26 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.22 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 99.22 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 99.21 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 99.19 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 99.19 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 99.15 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 99.05 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.94 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.77 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.75 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 98.72 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.71 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.64 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.57 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.56 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.55 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.54 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 98.49 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 98.23 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.19 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 98.1 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.92 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 97.28 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.23 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 96.98 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 96.94 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 84.59 | |
| d1wfda_ | 93 | Hypothetical protein 1500032H18Rik {Mouse (Mus mus | 84.01 | |
| d1qsaa1 | 450 | 70 KDa soluble lytic transglycosylase (SLT70), sup | 80.91 |
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.2e-56 Score=423.27 Aligned_cols=257 Identities=20% Similarity=0.309 Sum_probs=219.9
Q ss_pred CCcccccccCCCCCCcEEEEEEEcC-CcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
.+++.+.++||+|+||+||+|.+++ |+.||||+++... ...++|.+|+++|++++|||||+++++|.+++..++||||
T Consensus 16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~ 94 (287)
T d1opja_ 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 94 (287)
T ss_dssp GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeec
Confidence 3456778889999999999999864 8999999997543 3567899999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC----
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK---- 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 215 (497)
+++|+|.+++.......+++..+..|+.||+.||.|||+++ |+||||||+||||+.++++||+|||+++......
T Consensus 95 ~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~-iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~ 173 (287)
T d1opja_ 95 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 173 (287)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEE
T ss_pred ccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCC-cccCccccCeEEECCCCcEEEccccceeecCCCCceee
Confidence 99999999998766788999999999999999999999999 9999999999999999999999999998755432
Q ss_pred -ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHH
Q 010932 216 -SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 216 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 294 (497)
...||+.|+|||++.+..++.++|||||||++|||++|+.||....... .+...+........+..+++.+.+|+
T Consensus 174 ~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~l~~li 249 (287)
T d1opja_ 174 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----QVYELLEKDYRMERPEGCPEKVYELM 249 (287)
T ss_dssp TTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----HHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred ccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHH----HHHHHHhcCCCCCCCccchHHHHHHH
Confidence 2346889999999999999999999999999999999877664322111 11222333344556677888999999
Q ss_pred HHhcccCCCCCCCHHHHHHHhhhhhcccc
Q 010932 295 SKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323 (497)
Q Consensus 295 ~~cl~~dp~~Rps~~~ll~~l~~~~~~~~ 323 (497)
.+||+.||++|||+.+|++.|+.+.+...
T Consensus 250 ~~cl~~dP~~Rps~~ei~~~L~~~~~~~~ 278 (287)
T d1opja_ 250 RACWQWNPSDRPSFAEIHQAFETMFQESS 278 (287)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHTTSSSC
T ss_pred HHHcCCCHhHCcCHHHHHHHHHHHHHhCC
Confidence 99999999999999999999988865543
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.8e-56 Score=427.10 Aligned_cols=269 Identities=20% Similarity=0.296 Sum_probs=214.1
Q ss_pred cccCHHHHHHHhcCCC------cccccccCCCCCCcEEEEEEEcC-C---cEEEEEEccCCCCC-ChhHHHHHHHHhccC
Q 010932 47 KEFVLADLRAATNGFS------SELIVSESGDKAPNVVYRGRLKN-N---RLVAIKRFSRQSWP-DPHQFVTEAAGLGNV 115 (497)
Q Consensus 47 ~~~~~~~~~~~~~~~~------~~~~~~~lg~G~~g~V~~~~~~~-~---~~vavK~~~~~~~~-~~~~~~~e~~~l~~l 115 (497)
..++++++..++.+|+ .+.+.+.||+|+||+||+|.++. | ..||||++...... ..+.|.+|+++|+++
T Consensus 5 d~~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l 84 (299)
T d1jpaa_ 5 DPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF 84 (299)
T ss_dssp CGGGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhC
Confidence 3456777777776664 34556789999999999999753 3 36899998754332 246799999999999
Q ss_pred CCCcceeeeeeeeeCCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC
Q 010932 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD 195 (497)
Q Consensus 116 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~ 195 (497)
+|||||+++|++...+..++||||+++|+|.+++.. ..+.+++..+..++.||+.||.|||+++ ++||||||+||||+
T Consensus 85 ~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~-~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHrDlKp~NILl~ 162 (299)
T d1jpaa_ 85 DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLADMN-YVHRDLAARNILVN 162 (299)
T ss_dssp CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEC
T ss_pred CCCCCccEEEEEeeCCEEEEEEEecCCCcceeeecc-ccCCCCHHHHHHHHHHHHHHHHHHhhCC-CccCccccceEEEC
Confidence 999999999999999999999999999999998865 3567999999999999999999999999 99999999999999
Q ss_pred CCCCeeEcccCCccccCCCC---------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHH
Q 010932 196 EDGDPRLSSFGLMKNSRDGK---------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVI 265 (497)
Q Consensus 196 ~~~~~kl~Dfgla~~~~~~~---------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~ 265 (497)
.++++||+|||+++...... ...+|+.|||||++.++.++.++|||||||+||||+| |+.||.......+
T Consensus 163 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~ 242 (299)
T d1jpaa_ 163 SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV 242 (299)
T ss_dssp TTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH
T ss_pred CCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999999998654321 1346889999999999999999999999999999998 7877765433222
Q ss_pred hccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhccc
Q 010932 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQT 322 (497)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~ 322 (497)
...+....+.+.+..++..+.+|+.+||+.||++|||+.+|++.|+.+.+.+
T Consensus 243 -----~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~p 294 (299)
T d1jpaa_ 243 -----INAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNP 294 (299)
T ss_dssp -----HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred -----HHHHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcCh
Confidence 1122223334456667888999999999999999999999999999886543
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-56 Score=417.71 Aligned_cols=251 Identities=22% Similarity=0.315 Sum_probs=206.7
Q ss_pred CcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
+++.+++.||+|+||+||+|.+++++.||||+++... ...++|.+|++++++++|||||+++|++..++..++||||++
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~ 83 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 83 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence 4677889999999999999999888999999997643 346789999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-----Cc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-----KS 216 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 216 (497)
+|+|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++..... ..
T Consensus 84 ~g~L~~~l~~-~~~~~~~~~~~~i~~qia~gl~~lH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~ 161 (263)
T d1sm2a_ 84 HGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 161 (263)
T ss_dssp TCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCTTCSGGGEEECGGGCEEECSCC---------------
T ss_pred CCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHhhhccc-eeecccchhheeecCCCCeEecccchheeccCCCceeecc
Confidence 9999999865 3567999999999999999999999999 999999999999999999999999999865432 23
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCch-hhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSH-ALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
..||+.|+|||++.+..++.++|||||||++|||+|+..||... ....+ ...+........|..+++++.+|+.
T Consensus 162 ~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~-----~~~i~~~~~~~~p~~~~~~l~~li~ 236 (263)
T d1sm2a_ 162 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV-----VEDISTGFRLYKPRLASTHVYQIMN 236 (263)
T ss_dssp ---CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHH-----HHHHHHTCCCCCCTTSCHHHHHHHH
T ss_pred eecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHH-----HHHHHhcCCCCCccccCHHHHHHHH
Confidence 56789999999999999999999999999999999966555432 21111 1112222333455667788999999
Q ss_pred HhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 296 KCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
+||+.||++|||+++|+++|+.+.+
T Consensus 237 ~cl~~~p~~Rps~~~il~~L~~i~e 261 (263)
T d1sm2a_ 237 HCWKERPEDRPAFSRLLRQLAEIAE 261 (263)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHccCCHhHCcCHHHHHHHHHHHHh
Confidence 9999999999999999999998854
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-55 Score=417.98 Aligned_cols=256 Identities=19% Similarity=0.250 Sum_probs=205.6
Q ss_pred CCcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
.+.+.+++.||+|+||+||+|+++ ..||||+++.... ...+.|.+|+.+|++++|||||++++++.. +..++|||
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~E 83 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQ 83 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred cccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEe
Confidence 456778888999999999999874 3599999975432 235689999999999999999999998754 56899999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---- 214 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 214 (497)
|+++|+|.+++... ...+++..+..++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+|+.....
T Consensus 84 y~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~gl~yLH~~~-ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~ 161 (276)
T d1uwha_ 84 WCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 161 (276)
T ss_dssp CCCEEEHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTSSEEECCCCCSCC--------
T ss_pred cCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHhcCC-EeccccCHHHEEEcCCCCEEEccccceeeccccCCcc
Confidence 99999999999653 467999999999999999999999999 999999999999999999999999999764322
Q ss_pred --CccccCCCCCCcccccc---CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHH
Q 010932 215 --KSYSTNLAYTPPEFLRT---GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQ 289 (497)
Q Consensus 215 --~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (497)
....||+.|||||++.+ ..++.++|||||||+||||+||+.||............+..-.........+..+++.
T Consensus 162 ~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 241 (276)
T d1uwha_ 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 241 (276)
T ss_dssp ----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHH
T ss_pred cccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHH
Confidence 34578999999999964 3589999999999999999999998865321111111111101111112344556788
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 290 LVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 290 l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
+.+|+.+||+.||++|||+.+|+++|+.+.+.
T Consensus 242 l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~ 273 (276)
T d1uwha_ 242 MKRLMAECLKKKRDERPLFPQILASIELLARS 273 (276)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence 99999999999999999999999999988753
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-55 Score=416.67 Aligned_cols=245 Identities=18% Similarity=0.245 Sum_probs=210.8
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
.|.++++||+|+||+||+|.++ +|+.||||+++.......+.+.+|+.+|++++|||||++++++.+.+..+|||||++
T Consensus 21 ~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~ 100 (293)
T d1yhwa1 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100 (293)
T ss_dssp TBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred ccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecC
Confidence 5788999999999999999975 599999999987666667889999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----Ccc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----KSY 217 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 217 (497)
||+|.+++.. +.+++..+..++.||+.||.|||++| |+||||||+|||++.+|++||+|||+++..... ...
T Consensus 101 gg~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 176 (293)
T d1yhwa1 101 GGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 176 (293)
T ss_dssp TCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCC
T ss_pred CCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCcHHHeEECCCCcEeeccchhheeecccccccccc
Confidence 9999998854 47999999999999999999999999 999999999999999999999999999865432 345
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHh
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKC 297 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 297 (497)
.||+.|||||++.+..++.++|||||||++|+|+||+.||............. .........+...++.+.+||.+|
T Consensus 177 ~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~---~~~~~~~~~~~~~s~~~~~li~~~ 253 (293)
T d1yhwa1 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA---TNGTPELQNPEKLSAIFRDFLNRC 253 (293)
T ss_dssp CSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH---HHCSCCCSSGGGSCHHHHHHHHHH
T ss_pred ccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHH---hCCCCCCCCcccCCHHHHHHHHHH
Confidence 79999999999999999999999999999999999999886543222111110 011112233456778899999999
Q ss_pred cccCCCCCCCHHHHHHH
Q 010932 298 LQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 298 l~~dp~~Rps~~~ll~~ 314 (497)
|+.||++|||+.++++|
T Consensus 254 L~~dP~~R~s~~eil~H 270 (293)
T d1yhwa1 254 LDMDVEKRGSAKELLQH 270 (293)
T ss_dssp TCSSTTTSCCHHHHTTC
T ss_pred ccCChhHCcCHHHHhcC
Confidence 99999999999999875
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-55 Score=414.64 Aligned_cols=244 Identities=19% Similarity=0.278 Sum_probs=211.0
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCC---CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQ---SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
++|.+++.||+|+||+||+|+++ +|+.||||++... .....+.+.+|+++|+.++|||||++++++.+.+..++||
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm 85 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 85 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence 46788899999999999999986 4899999998642 2334678999999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--C
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--K 215 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~ 215 (497)
||+++|+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 86 Ey~~~g~L~~~l~~--~~~l~e~~~~~i~~qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 162 (263)
T d2j4za1 86 EYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 162 (263)
T ss_dssp ECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCE
T ss_pred eecCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeeeeccccceecCCCCEeecccceeeecCCCccc
Confidence 99999999999975 567999999999999999999999999 999999999999999999999999999865544 3
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
...||+.|||||++.+..++.++|||||||+||||+||+.||........... +.. ....+|...++++.+|+.
T Consensus 163 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~----i~~--~~~~~p~~~s~~~~~li~ 236 (263)
T d2j4za1 163 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR----ISR--VEFTFPDFVTEGARDLIS 236 (263)
T ss_dssp ETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HHT--TCCCCCTTSCHHHHHHHH
T ss_pred ccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHH----HHc--CCCCCCccCCHHHHHHHH
Confidence 46799999999999999999999999999999999999999876543322211 111 112345567788999999
Q ss_pred HhcccCCCCCCCHHHHHHH
Q 010932 296 KCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~ 314 (497)
+||+.||++|||+++++++
T Consensus 237 ~~L~~dp~~R~t~~eil~h 255 (263)
T d2j4za1 237 RLLKHNPSQRPMLREVLEH 255 (263)
T ss_dssp HHTCSSGGGSCCHHHHHTC
T ss_pred HHccCCHhHCcCHHHHHcC
Confidence 9999999999999999975
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.3e-56 Score=418.08 Aligned_cols=253 Identities=21% Similarity=0.338 Sum_probs=212.7
Q ss_pred CCcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
++.+.+++.||+|+||+||+|.++++..||||+++... ...+.|.+|+++|++++|||||+++|++.+ +..++||||+
T Consensus 12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~ 89 (272)
T d1qpca_ 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM 89 (272)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeC
Confidence 35667888999999999999999888999999997543 356789999999999999999999998754 5679999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-----C
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-----K 215 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~ 215 (497)
++|+|.+++.......+++..++.|+.||+.||.|||+++ |+||||||+||||+.++.+||+|||+|+..... .
T Consensus 90 ~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~-ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~ 168 (272)
T d1qpca_ 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168 (272)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred CCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccchhheeeecccceeeccccceEEccCCcccccc
Confidence 9999999886544557999999999999999999999999 999999999999999999999999999865433 2
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
...||+.|||||++.++.++.++|||||||++|||+||..|+....... .+...+........|..+++.+.+|+.
T Consensus 169 ~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~----~~~~~i~~~~~~~~p~~~~~~l~~li~ 244 (272)
T d1qpca_ 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQNLERGYRMVRPDNCPEELYQLMR 244 (272)
T ss_dssp TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred ccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHH----HHHHHHHhcCCCCCcccChHHHHHHHH
Confidence 3567899999999999999999999999999999999776654322111 111112222334456667888999999
Q ss_pred HhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 296 KCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
+||+.||++|||+.+|++.|+.+..
T Consensus 245 ~cl~~~P~~Rpt~~ei~~~L~~~ft 269 (272)
T d1qpca_ 245 LCWKERPEDRPTFDYLRSVLEDFFT 269 (272)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHcCCCHhHCcCHHHHHHHhhhhhh
Confidence 9999999999999999999987653
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-55 Score=415.29 Aligned_cols=247 Identities=17% Similarity=0.142 Sum_probs=204.2
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
++|.+++.||+|+||+||+|+++ +|+.||||++..... ...+.+.+|+.+|++++|||||++++++.+++..+|||||
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy 84 (271)
T d1nvra_ 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 84 (271)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence 45788899999999999999986 599999999975433 2346799999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC------
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD------ 213 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------ 213 (497)
++||+|.+++.. ...+++..+..++.||+.||.|||++| |+||||||+|||++.++.+||+|||+|+....
T Consensus 85 ~~gg~L~~~l~~--~~~l~e~~~~~i~~qi~~al~ylH~~~-IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~ 161 (271)
T d1nvra_ 85 CSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 161 (271)
T ss_dssp CTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred cCCCcHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHcC-CccCcccHHHEEECCCCCEEEccchhheeeccCCcccc
Confidence 999999999964 568999999999999999999999999 99999999999999999999999999985432
Q ss_pred CCccccCCCCCCccccccCCC-CcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 214 GKSYSTNLAYTPPEFLRTGRV-IPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 214 ~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
.....||+.|||||++.+..+ +.++|||||||++|||+||+.||.......... ................++++.+
T Consensus 162 ~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~s~~~~~ 238 (271)
T d1nvra_ 162 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY---SDWKEKKTYLNPWKKIDSAPLA 238 (271)
T ss_dssp BCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHH---HHHHTTCTTSTTGGGSCHHHHH
T ss_pred ccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHH---HHHhcCCCCCCccccCCHHHHH
Confidence 234679999999999988776 678999999999999999999885432211111 1111111112223456788999
Q ss_pred HHHHhcccCCCCCCCHHHHHHH
Q 010932 293 LASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~ 314 (497)
|+.+||+.||++|||+++++++
T Consensus 239 li~~~L~~dP~~R~t~~eil~h 260 (271)
T d1nvra_ 239 LLHKILVENPSARITIPDIKKD 260 (271)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHcCCChhHCcCHHHHhcC
Confidence 9999999999999999999875
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-55 Score=415.64 Aligned_cols=246 Identities=18% Similarity=0.226 Sum_probs=208.5
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
.|.+++.||+|+||+||+|.++ +|+.||||+++.......+.+.+|+++|++++|||||++++++.+.+..+|||||++
T Consensus 13 ~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~ 92 (288)
T d2jfla1 13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 92 (288)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred CeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCC
Confidence 4688899999999999999986 599999999987666667889999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC----CCcc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD----GKSY 217 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~ 217 (497)
||+|.+++... ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+|+.... ....
T Consensus 93 ~g~L~~~~~~~-~~~l~e~~~~~i~~qi~~gL~ylH~~~-ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~ 170 (288)
T d2jfla1 93 GGAVDAVMLEL-ERPLTESQIQVVCKQTLDALNYLHDNK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF 170 (288)
T ss_dssp TEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCC
T ss_pred CCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-EEEeecChhheeECCCCCEEEEechhhhccCCCccccccc
Confidence 99999987642 467999999999999999999999999 99999999999999999999999999975432 2356
Q ss_pred ccCCCCCCccccc-----cCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccc-cccCCCCCHHHHHHHH
Q 010932 218 STNLAYTPPEFLR-----TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMD-SSLEGQYANEDATQLV 291 (497)
Q Consensus 218 ~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~ 291 (497)
.||+.|||||++. +..++.++|||||||++|||+||+.||.......... .+.. .......+...++++.
T Consensus 171 ~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~----~i~~~~~~~~~~~~~~s~~~~ 246 (288)
T d2jfla1 171 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL----KIAKSEPPTLAQPSRWSSNFK 246 (288)
T ss_dssp CSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHH----HHHHSCCCCCSSGGGSCHHHH
T ss_pred ccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHH----HHHcCCCCCCCccccCCHHHH
Confidence 7999999999984 4568899999999999999999999886543221111 1111 1111233456788899
Q ss_pred HHHHHhcccCCCCCCCHHHHHHH
Q 010932 292 ELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+||.+||+.||++|||+.+++++
T Consensus 247 ~li~~~L~~dp~~R~t~~ell~h 269 (288)
T d2jfla1 247 DFLKKCLEKNVDARWTTSQLLQH 269 (288)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHHHHHccCChhHCcCHHHHhcC
Confidence 99999999999999999999875
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.1e-54 Score=417.11 Aligned_cols=244 Identities=22% Similarity=0.233 Sum_probs=207.9
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC---hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
|.++++||+|+||+||+|++. +|+.||||++....... .+.+.+|+++|++++|||||++++++.+++..++||||
T Consensus 17 y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~ 96 (309)
T d1u5ra_ 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (309)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEe
Confidence 678899999999999999975 58999999997654333 34689999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCCcccc
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYST 219 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~g 219 (497)
|++|+|..++.. ...+++..+..++.||+.||.|||++| |+||||||+|||++.++++||+|||+++.........|
T Consensus 97 ~~~g~l~~~~~~--~~~l~e~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~G 173 (309)
T d1u5ra_ 97 CLGSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG 173 (309)
T ss_dssp CSEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred cCCCchHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEECCCCCEEEeecccccccCCCCcccc
Confidence 999999776654 568999999999999999999999999 99999999999999999999999999998877778899
Q ss_pred CCCCCCcccccc---CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 220 NLAYTPPEFLRT---GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 220 t~~y~aPE~~~~---~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
|+.|||||++.+ +.++.++|||||||++|||++|+.||.......... .+.........+..+++.+.+||.+
T Consensus 174 T~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~----~i~~~~~~~~~~~~~s~~~~~li~~ 249 (309)
T d1u5ra_ 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY----HIAQNESPALQSGHWSEYFRNFVDS 249 (309)
T ss_dssp CGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH----HHHHSCCCCCSCTTSCHHHHHHHHH
T ss_pred CccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHH----HHHhCCCCCCCCCCCCHHHHHHHHH
Confidence 999999999864 458999999999999999999999886543222111 1111111112234567889999999
Q ss_pred hcccCCCCCCCHHHHHHH
Q 010932 297 CLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~ 314 (497)
||+.||++|||+.++++|
T Consensus 250 ~L~~dP~~Rpt~~ell~H 267 (309)
T d1u5ra_ 250 CLQKIPQDRPTSEVLLKH 267 (309)
T ss_dssp HTCSSGGGSCCHHHHTTC
T ss_pred HCcCChhHCcCHHHHHhC
Confidence 999999999999999885
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-54 Score=402.94 Aligned_cols=248 Identities=23% Similarity=0.351 Sum_probs=213.1
Q ss_pred CcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
+++.+++.||+|+||+||+|++++++.||||+++.... ..+.|.+|+.++++++|||||+++|++.+.+..++||||++
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~ 82 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 82 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence 45578889999999999999998888999999986543 46789999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-----Cc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-----KS 216 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 216 (497)
+|+|..++.. ....+++..+..++.||++||.|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 83 ~g~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~~LH~~~-iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 160 (258)
T d1k2pa_ 83 NGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 160 (258)
T ss_dssp TEEHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTT-BCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCC
T ss_pred CCcHHHhhhc-cccCCcHHHHHHHHHHHHHHHHHHhhcC-cccccccceeEEEcCCCcEEECcchhheeccCCCceeecc
Confidence 9999998755 3567899999999999999999999999 999999999999999999999999999754332 23
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
..+|+.|+|||++.+..++.++|||||||++|||+| |+.||.......+.. .+....+...|...++.+.+|+.
T Consensus 161 ~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~-----~i~~~~~~~~p~~~~~~l~~li~ 235 (258)
T d1k2pa_ 161 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE-----HIAQGLRLYRPHLASEKVYTIMY 235 (258)
T ss_dssp SCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHH-----HHHTTCCCCCCTTCCHHHHHHHH
T ss_pred cCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHH-----HHHhCCCCCCcccccHHHHHHHH
Confidence 567889999999999999999999999999999998 777776543332221 12222334556677788999999
Q ss_pred HhcccCCCCCCCHHHHHHHhhh
Q 010932 296 KCLQYEAKDRPDVKFLLSAVAP 317 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~l~~ 317 (497)
+||+.||++|||+++|+++|..
T Consensus 236 ~cl~~dP~~RPt~~eil~~L~d 257 (258)
T d1k2pa_ 236 SCWHEKADERPTFKILLSNILD 257 (258)
T ss_dssp HTTCSSGGGSCCHHHHHHHHHC
T ss_pred HHccCCHhHCcCHHHHHHHhhC
Confidence 9999999999999999999864
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-55 Score=412.07 Aligned_cols=248 Identities=20% Similarity=0.276 Sum_probs=198.6
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeee--CCceEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAE--GDERLLV 136 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv 136 (497)
++|.+++.||+|+||+||+|+++ +|+.||||++....... .+.+.+|+++|++++|||||++++++.+ .+..++|
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv 83 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 83 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence 46788999999999999999976 59999999997654332 4568999999999999999999999865 4568999
Q ss_pred EEcCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCC----CcccccCCCcceEeCCCCCeeEcccCCccc
Q 010932 137 AQYMPNDTLSKHLFHW--DKQPLPWEMRVRVAYYIAQALDHCNSQN----RKLYHDLNAYRVLFDEDGDPRLSSFGLMKN 210 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~lh~~~----~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 210 (497)
|||+++|+|.+++... ....+++..++.++.||+.||.|||+++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~ 163 (269)
T d2java1 84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 163 (269)
T ss_dssp EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence 9999999999998642 2567999999999999999999999854 399999999999999999999999999986
Q ss_pred cCCC----CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHH
Q 010932 211 SRDG----KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANED 286 (497)
Q Consensus 211 ~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (497)
.... ....||+.|||||++.+..++.++|||||||++|||+||+.||.......+... +........+..+
T Consensus 164 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~-----i~~~~~~~~~~~~ 238 (269)
T d2java1 164 LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK-----IREGKFRRIPYRY 238 (269)
T ss_dssp C-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-----HHHTCCCCCCTTS
T ss_pred cccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHH-----HHcCCCCCCCccc
Confidence 5433 346789999999999999999999999999999999999999876543332111 1111122345567
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 287 ATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 287 ~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
++++.+|+.+||+.||++|||+.+++++
T Consensus 239 s~~l~~li~~~L~~dp~~Rps~~ell~h 266 (269)
T d2java1 239 SDELNEIITRMLNLKDYHRPSVEEILEN 266 (269)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 7889999999999999999999999874
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-54 Score=419.25 Aligned_cols=249 Identities=19% Similarity=0.246 Sum_probs=204.1
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC-hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
+|.+++.||+|+||+||+|.++ +|+.||||+++...... .+++.+|+.+|++++|||||+++++|.+..+.++||||+
T Consensus 7 ~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~ 86 (322)
T d1s9ja_ 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 86 (322)
T ss_dssp GEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred CCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 5678899999999999999976 59999999997653333 467999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCcccccCCCcceEeCCCCCeeEcccCCccccC--CCCcc
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQ-NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR--DGKSY 217 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~--~~~~~ 217 (497)
+||+|.+++.+ .+.+++..+..++.||+.||.|||++ + |+||||||+|||++.+|++||+|||+|+... ...+.
T Consensus 87 ~gg~L~~~l~~--~~~l~~~~~~~~~~qil~aL~yLH~~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~ 163 (322)
T d1s9ja_ 87 DGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 163 (322)
T ss_dssp TTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---
T ss_pred CCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEccccCHHHeeECCCCCEEEeeCCCccccCCCccccc
Confidence 99999999975 46799999999999999999999975 7 9999999999999999999999999998543 23467
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccc-------------------------
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLL------------------------- 272 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~------------------------- 272 (497)
.||+.|||||++.+..++.++|||||||++|||++|+.||...............
T Consensus 164 ~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (322)
T d1s9ja_ 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMD 243 (322)
T ss_dssp CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC----------------------------
T ss_pred cCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccc
Confidence 8999999999999999999999999999999999999998654221110000000
Q ss_pred ---------cccc---ccCCCCC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 273 ---------LMDS---SLEGQYA-NEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 273 ---------~~~~---~~~~~~~-~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..+. ......+ ...+.++.+|+.+||+.||++|||++++|+|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H 298 (322)
T d1s9ja_ 244 SRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298 (322)
T ss_dssp --CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 0000 0000011 1245789999999999999999999999986
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.5e-54 Score=412.09 Aligned_cols=247 Identities=19% Similarity=0.197 Sum_probs=194.7
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
.|.+++.||+|+||+||+|.++ +|+.||||++...... ....+.+|+.+|+.++|||||++++++.+++..+|||||+
T Consensus 10 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~ 89 (307)
T d1a06a_ 10 IYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV 89 (307)
T ss_dssp TEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 3688889999999999999986 5899999999765432 3456889999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC---CCCCeeEcccCCccccCCC---
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD---EDGDPRLSSFGLMKNSRDG--- 214 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfgla~~~~~~--- 214 (497)
+||+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||+. .++.+||+|||+++.....
T Consensus 90 ~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~ 166 (307)
T d1a06a_ 90 SGGELFDRIVE--KGFYTERDASRLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL 166 (307)
T ss_dssp CSCBHHHHHHT--CSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCC------------
T ss_pred CCCcHHHhhhc--ccCCCHHHHHHHHHHHHHHHHhhhhce-eeeEEecccceeecccCCCceEEEeccceeEEccCCCee
Confidence 99999999965 568999999999999999999999999 99999999999995 5789999999999865443
Q ss_pred CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHH
Q 010932 215 KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 294 (497)
.+..||+.|||||++.+..++.++|||||||++|||++|+.||.............. .........+...++++.+|+
T Consensus 167 ~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~s~~~~~li 244 (307)
T d1a06a_ 167 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK--AEYEFDSPYWDDISDSAKDFI 244 (307)
T ss_dssp ------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHT--TCCCCCTTTTTTSCHHHHHHH
T ss_pred eeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhc--cCCCCCCccccCCCHHHHHHH
Confidence 346799999999999999999999999999999999999999876543332211111 111122233455778899999
Q ss_pred HHhcccCCCCCCCHHHHHHH
Q 010932 295 SKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 295 ~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+||+.||++|||+.+++++
T Consensus 245 ~~~L~~dP~~R~s~~eil~h 264 (307)
T d1a06a_ 245 RHLMEKDPEKRFTCEQALQH 264 (307)
T ss_dssp HHHSCSSGGGSCCHHHHHHS
T ss_pred HHHccCCHhHCcCHHHHhcC
Confidence 99999999999999999986
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.8e-54 Score=406.72 Aligned_cols=253 Identities=21% Similarity=0.282 Sum_probs=206.1
Q ss_pred ccccccCCCCCCcEEEEEEEcC-C----cEEEEEEccCCCCCC-hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLKN-N----RLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~~-~----~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
+.+.+.||+|+||+||+|.+++ + ..||||+++...... ...|.+|+.+|++++|||||+++|++.+.+..++||
T Consensus 9 ~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~ 88 (283)
T d1mqba_ 9 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIIT 88 (283)
T ss_dssp EEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred eEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEE
Confidence 4455667999999999999764 2 479999997543322 457999999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 214 (497)
||+.+++|.+.+.. ....+++..+..++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.....
T Consensus 89 e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~lH~~~-iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~ 166 (283)
T d1mqba_ 89 EYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 166 (283)
T ss_dssp ECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC----------
T ss_pred EecccCcchhhhhc-ccccccHHHHHHHHHHHHHhhhhccccc-cccCccccceEEECCCCeEEEcccchhhcccCCCcc
Confidence 99999999988765 3568999999999999999999999999 999999999999999999999999999864332
Q ss_pred ----CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHH
Q 010932 215 ----KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290 (497)
Q Consensus 215 ----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (497)
....||+.|||||++.++.++.++|||||||++|||+||..|+...... ..+...+....+.+.+..++..+
T Consensus 167 ~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~l 242 (283)
T d1mqba_ 167 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN----HEVMKAINDGFRLPTPMDCPSAI 242 (283)
T ss_dssp -------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHHHHHHHTTCCCCCCTTCBHHH
T ss_pred ceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH----HHHHHHHhccCCCCCchhhHHHH
Confidence 1245788999999999999999999999999999999987766443211 11122233334455666788899
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHhhhhhccc
Q 010932 291 VELASKCLQYEAKDRPDVKFLLSAVAPLQKQT 322 (497)
Q Consensus 291 ~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~ 322 (497)
.+|+.+||+.||++|||+.+|++.|+.+.+.+
T Consensus 243 ~~li~~cl~~~p~~RPt~~eil~~L~~l~~~p 274 (283)
T d1mqba_ 243 YQLMMQCWQQERARRPKFADIVSILDKLIRAP 274 (283)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred HHHHHHHCcCCHhHCcCHHHHHHHHHHHhhCc
Confidence 99999999999999999999999999887643
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-54 Score=406.75 Aligned_cols=243 Identities=17% Similarity=0.262 Sum_probs=202.0
Q ss_pred ccCCCCCCcEEEEEEEcC---CcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCC
Q 010932 68 SESGDKAPNVVYRGRLKN---NRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 142 (497)
++||+|+||+||+|.+++ ++.||||+++...... .+.|.+|+++|++++|||||+++|+|.+ +..+|||||+++
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~ 91 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 91 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence 358999999999998653 5689999997543332 4679999999999999999999999965 567899999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC-------
Q 010932 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK------- 215 (497)
Q Consensus 143 ~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------- 215 (497)
|+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 92 g~L~~~l~~--~~~l~~~~~~~i~~qi~~gl~ylH~~~-iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~ 168 (277)
T d1xbba_ 92 GPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 168 (277)
T ss_dssp EEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC--
T ss_pred CcHHHHHhh--ccCCCHHHHHHHHHHHHHHHhhHHhCC-cccCCCcchhhcccccCcccccchhhhhhcccccccccccc
Confidence 999999975 567999999999999999999999999 9999999999999999999999999998654331
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 294 (497)
...||+.|||||++.+..++.++|||||||++|||+| |+.||.......+ ...+....+...|..++.++.+|+
T Consensus 169 ~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~-----~~~i~~~~~~~~p~~~~~~~~~li 243 (277)
T d1xbba_ 169 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-----TAMLEKGERMGCPAGCPREMYDLM 243 (277)
T ss_dssp --CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH-----HHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred ccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHH-----HHHHHcCCCCCCCcccCHHHHHHH
Confidence 3457899999999999999999999999999999998 7888765432221 122222334456677888999999
Q ss_pred HHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 295 SKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 295 ~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
.+||+.||++|||+++|++.|+...
T Consensus 244 ~~cl~~dp~~RPs~~~i~~~L~~~~ 268 (277)
T d1xbba_ 244 NLCWTYDVENRPGFAAVELRLRNYY 268 (277)
T ss_dssp HHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHhhCHH
Confidence 9999999999999999998887653
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-54 Score=410.61 Aligned_cols=244 Identities=18% Similarity=0.172 Sum_probs=208.6
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCC---CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQ---SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
++|.+++.||+|+||+||+|.++ +|+.||||++... .....+.+.+|+++|++++|||||++++++.+.+..++||
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 87 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 87 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence 45788999999999999999985 5999999998642 2334578999999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC---
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--- 214 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 214 (497)
||++||+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.....
T Consensus 88 Ey~~gg~L~~~~~~--~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~ 164 (288)
T d1uu3a_ 88 SYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 164 (288)
T ss_dssp CCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EccCCCCHHHhhhc--cCCCCHHHHHHHHHHHHHHHHhhcccc-EEcCcCCccccccCCCceEEecccccceecccCCcc
Confidence 99999999998875 568999999999999999999999999 999999999999999999999999999865422
Q ss_pred ---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHH
Q 010932 215 ---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291 (497)
Q Consensus 215 ---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (497)
....||+.|||||++.+..++.++|||||||++|||+||+.||.......+... +... ...+|...++++.
T Consensus 165 ~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~s~~~~ 238 (288)
T d1uu3a_ 165 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKL--EYDFPEKFFPKAR 238 (288)
T ss_dssp -----CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHTT--CCCCCTTCCHHHH
T ss_pred cccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHH----HHcC--CCCCCccCCHHHH
Confidence 245799999999999999999999999999999999999999876543332211 1111 1234556778899
Q ss_pred HHHHHhcccCCCCCCCHHHHHHH
Q 010932 292 ELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 292 ~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+||.+||+.||++|||+++++.+
T Consensus 239 ~li~~~L~~dP~~R~t~~e~~~~ 261 (288)
T d1uu3a_ 239 DLVEKLLVLDATKRLGCEEMEGY 261 (288)
T ss_dssp HHHHTTSCSSGGGSTTSGGGTCH
T ss_pred HHHHHHccCCHhHCcCHHHHcCC
Confidence 99999999999999999997665
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8e-54 Score=406.53 Aligned_cols=243 Identities=22% Similarity=0.297 Sum_probs=204.4
Q ss_pred cCCCCCCcEEEEEEEc---CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCCCCC
Q 010932 69 ESGDKAPNVVYRGRLK---NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDT 144 (497)
Q Consensus 69 ~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 144 (497)
+||+|+||+||+|.++ ++..||||+++..... ..+.|.+|+++|++++|||||+++|++.+ +..+|||||+++|+
T Consensus 16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~ 94 (285)
T d1u59a_ 16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 94 (285)
T ss_dssp EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEE
T ss_pred EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCCc
Confidence 4899999999999864 2558999999764322 25679999999999999999999999865 56899999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-------Ccc
Q 010932 145 LSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-------KSY 217 (497)
Q Consensus 145 L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-------~~~ 217 (497)
|.+++.. .+..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 95 L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~ylH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~ 172 (285)
T d1u59a_ 95 LHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 172 (285)
T ss_dssp HHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSS
T ss_pred HHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCcCchhheeeccCCceeeccchhhhccccccccccccccc
Confidence 9998754 3567999999999999999999999999 999999999999999999999999999865432 234
Q ss_pred ccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 218 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
.||+.|||||++.++.++.++|||||||++|||+| |+.||.......+ ...+....+.+.|..+++++.+|+.+
T Consensus 173 ~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~-----~~~i~~~~~~~~p~~~~~~l~~li~~ 247 (285)
T d1u59a_ 173 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV-----MAFIEQGKRMECPPECPPELYALMSD 247 (285)
T ss_dssp CCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHH-----HHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred ccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHH-----HHHHHcCCCCCCCCcCCHHHHHHHHH
Confidence 57889999999999999999999999999999998 8888765432221 12222333445667788899999999
Q ss_pred hcccCCCCCCCHHHHHHHhhhhh
Q 010932 297 CLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
||+.||++|||+.+|++.|+...
T Consensus 248 cl~~~p~~RPs~~~i~~~L~~~~ 270 (285)
T d1u59a_ 248 CWIYKWEDRPDFLTVEQRMRACY 270 (285)
T ss_dssp TTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HcCCCHhHCcCHHHHHHHHHHHH
Confidence 99999999999999999887653
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-53 Score=401.64 Aligned_cols=245 Identities=16% Similarity=0.230 Sum_probs=199.0
Q ss_pred ccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeee----CCceEEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAE----GDERLLV 136 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv 136 (497)
+++..+||+|+||+||+|.++ +++.||+|++...... ..+.|.+|+++|++++|||||++++++.+ ....++|
T Consensus 11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv 90 (270)
T d1t4ha_ 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 90 (270)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence 355567899999999999986 4889999998754322 24579999999999999999999999865 3457999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CcccccCCCcceEeC-CCCCeeEcccCCccccCCC
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQN-RKLYHDLNAYRVLFD-EDGDPRLSSFGLMKNSRDG 214 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~-~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~~ 214 (497)
|||+++|+|.+++.. ...+++..+..++.||+.||.|||+++ +|+||||||+|||++ .++.+||+|||+++.....
T Consensus 91 mE~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~ 168 (270)
T d1t4ha_ 91 TELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 168 (270)
T ss_dssp EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred EeCCCCCcHHHHHhc--cccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCC
Confidence 999999999999975 468999999999999999999999875 399999999999997 5899999999999865443
Q ss_pred --CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 215 --KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 215 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
....||+.|||||++.+ .++.++|||||||++|||++|+.||............+ ........++...++++.+
T Consensus 169 ~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i---~~~~~~~~~~~~~~~~~~~ 244 (270)
T d1t4ha_ 169 FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRV---TSGVKPASFDKVAIPEVKE 244 (270)
T ss_dssp SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHH---TTTCCCGGGGGCCCHHHHH
T ss_pred ccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHH---HcCCCCcccCccCCHHHHH
Confidence 35689999999999874 69999999999999999999999986432111111111 1111111223345667999
Q ss_pred HHHHhcccCCCCCCCHHHHHHH
Q 010932 293 LASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~ 314 (497)
|+.+||+.||++|||+.|+++|
T Consensus 245 li~~~l~~dp~~R~s~~ell~H 266 (270)
T d1t4ha_ 245 IIEGCIRQNKDERYSIKDLLNH 266 (270)
T ss_dssp HHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHccCCHhHCcCHHHHhCC
Confidence 9999999999999999999875
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-53 Score=404.95 Aligned_cols=252 Identities=23% Similarity=0.325 Sum_probs=209.4
Q ss_pred CcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcCC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMP 141 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 141 (497)
+++++.+.||+|+||+||+|+++++..||||+++... ...+.|.+|+.+|++++|||||+++|++.+ +..++||||++
T Consensus 17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~~ 94 (285)
T d1fmka3 17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 94 (285)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEecC
Confidence 4678888999999999999999888889999997543 356789999999999999999999999854 56899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-----Cc
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-----KS 216 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 216 (497)
+|+|..++.......+++..++.++.||+.||.|||+++ ++||||||+||||+.++++||+|||+++..... ..
T Consensus 95 ~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~-ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 173 (285)
T d1fmka3 95 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 173 (285)
T ss_dssp TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred CCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhh-eecccccceEEEECCCCcEEEcccchhhhccCCCceeecc
Confidence 999999887654567999999999999999999999999 999999999999999999999999999865332 23
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
..||+.|+|||++.++.++.++|||||||++|||+||+.|+........ +...+......+.+..+++++.+||.+
T Consensus 174 ~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~l~~li~~ 249 (285)
T d1fmka3 174 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE----VLDQVERGYRMPCPPECPESLHDLMCQ 249 (285)
T ss_dssp --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH----HHHHHHTTCCCCCCTTSCHHHHHHHHH
T ss_pred ccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHH----HHHHHHhcCCCCCCcccCHHHHHHHHH
Confidence 5678999999999999999999999999999999998776644321111 111122223345666778899999999
Q ss_pred hcccCCCCCCCHHHHHHHhhhhhc
Q 010932 297 CLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 297 cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
||+.||++|||+.+|++.|+....
T Consensus 250 cl~~dP~~Rps~~~i~~~L~~~~~ 273 (285)
T d1fmka3 250 CWRKEPEERPTFEYLQAFLEDYFT 273 (285)
T ss_dssp HTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred HcccCHhHCcCHHHHHHHHhhhhc
Confidence 999999999999999999887653
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-53 Score=414.30 Aligned_cols=251 Identities=20% Similarity=0.292 Sum_probs=207.4
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-C-----cEEEEEEccCCC-CCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCce
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-N-----RLVAIKRFSRQS-WPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDER 133 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 133 (497)
+++.+++.||+|+||+||+|++.. + ..||||++.... ......+.+|+.+|.++ +|||||++++++.+.+..
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~ 116 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI 116 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE
Confidence 456788899999999999999753 2 369999986543 33456899999999998 899999999999999999
Q ss_pred EEEEEcCCCCChhhhhhcCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcce
Q 010932 134 LLVAQYMPNDTLSKHLFHWD---------------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRV 192 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~---------------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Ni 192 (497)
++||||+++|+|.++|.... ...+++..++.++.||+.||.|||+++ ||||||||+||
T Consensus 117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~-IiHRDlKp~Ni 195 (325)
T d1rjba_ 117 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNV 195 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGE
T ss_pred EEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCchhcc
Confidence 99999999999999997532 235899999999999999999999999 99999999999
Q ss_pred EeCCCCCeeEcccCCccccCCCC------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHH
Q 010932 193 LFDEDGDPRLSSFGLMKNSRDGK------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVI 265 (497)
Q Consensus 193 ll~~~~~~kl~Dfgla~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~ 265 (497)
|++.++++||+|||+|+...... ...||+.|||||++.++.++.++|||||||+||||+| |+.||.......
T Consensus 196 ll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~- 274 (325)
T d1rjba_ 196 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA- 274 (325)
T ss_dssp EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-
T ss_pred ccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHH-
Confidence 99999999999999998644332 3457899999999999999999999999999999998 788775432211
Q ss_pred hccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhh
Q 010932 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAP 317 (497)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~ 317 (497)
.+..++....+.+.|..+++++.+||.+||+.||++|||+++|+++|..
T Consensus 275 ---~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~ 323 (325)
T d1rjba_ 275 ---NFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC 323 (325)
T ss_dssp ---HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---HHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence 1122233334445667788899999999999999999999999999863
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-53 Score=400.33 Aligned_cols=252 Identities=21% Similarity=0.337 Sum_probs=205.0
Q ss_pred CCcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeee-CCceEEEEEc
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE-GDERLLVAQY 139 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~ 139 (497)
.+++.+++.||+|+||.||+|.++ |..||||+++... ..+.|.+|+++|++++|||||+++|++.+ .+..++||||
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey 82 (262)
T d1byga_ 6 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 82 (262)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred HHHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEec
Confidence 345678888999999999999984 7889999997543 45789999999999999999999999865 4568999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-Cccc
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-KSYS 218 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~ 218 (497)
+++|+|.++|.......+++..++.|+.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++..... ....
T Consensus 83 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~ 161 (262)
T d1byga_ 83 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 161 (262)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCc-eeccccchHhheecCCCCEeecccccceecCCCCcccc
Confidence 99999999997643456999999999999999999999999 999999999999999999999999999865443 3456
Q ss_pred cCCCCCCccccccCCCCcccceeehhhhHHHHhhC-CCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHHh
Q 010932 219 TNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSG-KHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKC 297 (497)
Q Consensus 219 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 297 (497)
+|+.|+|||++.++.++.++|||||||++|||+|+ +.|+...... .+...+....+.+.+..+++.+.+|+.+|
T Consensus 162 ~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~li~~c 236 (262)
T d1byga_ 162 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPRVEKGYKMDAPDGCPPAVYEVMKNC 236 (262)
T ss_dssp CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-----GHHHHHTTTCCCCCCTTCCHHHHHHHHHH
T ss_pred ccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHH-----HHHHHHHcCCCCCCCccCCHHHHHHHHHH
Confidence 78899999999999999999999999999999994 5554432221 12222333345566777888999999999
Q ss_pred cccCCCCCCCHHHHHHHhhhhhcc
Q 010932 298 LQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 298 l~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
|+.||++|||+.+|+++|+.++..
T Consensus 237 l~~dP~~Rps~~~l~~~L~~i~~~ 260 (262)
T d1byga_ 237 WHLDAAMRPSFLQLREQLEHIKTH 260 (262)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cccCHhHCcCHHHHHHHHHHHHhC
Confidence 999999999999999999988643
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=2.4e-53 Score=414.90 Aligned_cols=250 Identities=16% Similarity=0.168 Sum_probs=212.2
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
|+.|.+++.||+|+||+||+|.++ +|+.||||+++.....+.+.+.+|+.+|++++|||||++++++.+++..+|||||
T Consensus 28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~ 107 (352)
T d1koba_ 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 107 (352)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 456889999999999999999975 5999999999865544456789999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC--CCCCeeEcccCCccccCCCC--
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD--EDGDPRLSSFGLMKNSRDGK-- 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~--~~~~~kl~Dfgla~~~~~~~-- 215 (497)
|+||+|.+++.. ....+++..++.|+.||+.||.|||++| |+||||||+||||+ .++.+||+|||+++......
T Consensus 108 ~~gg~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~-iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~ 185 (352)
T d1koba_ 108 LSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 185 (352)
T ss_dssp CCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred CCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccccccccccccCCCeEEEeecccceecCCCCce
Confidence 999999988754 2457999999999999999999999999 99999999999998 67899999999998765443
Q ss_pred -ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHH
Q 010932 216 -SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294 (497)
Q Consensus 216 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 294 (497)
...||+.|||||++.+..++.++|||||||++|+|+||+.||.+........... ..............++++.+||
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~s~~~~~li 263 (352)
T d1koba_ 186 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVK--RCDWEFDEDAFSSVSPEAKDFI 263 (352)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH--HCCCCCCSSTTTTSCHHHHHHH
T ss_pred eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--hCCCCCCcccccCCCHHHHHHH
Confidence 4578999999999999999999999999999999999999987654332211111 1111122233455778899999
Q ss_pred HHhcccCCCCCCCHHHHHHH
Q 010932 295 SKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 295 ~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+||+.||.+|||+.++++|
T Consensus 264 ~~~L~~dp~~R~s~~eil~H 283 (352)
T d1koba_ 264 KNLLQKEPRKRLTVHDALEH 283 (352)
T ss_dssp HTTSCSSGGGSCCHHHHHTS
T ss_pred HHHccCChhHCcCHHHHhcC
Confidence 99999999999999999986
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=3e-53 Score=413.88 Aligned_cols=249 Identities=18% Similarity=0.180 Sum_probs=210.1
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEcC
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
+.|.+++.||+|+||+||+|.++ +|+.||||++........+.+.+|+.+|++++|||||++++++.+.+..+|||||+
T Consensus 26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~ 105 (350)
T d1koaa2 26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 105 (350)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 35788899999999999999985 59999999997665445678999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC--CCCCeeEcccCCccccCCCC---
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD--EDGDPRLSSFGLMKNSRDGK--- 215 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~--~~~~~kl~Dfgla~~~~~~~--- 215 (497)
+||+|.+++.. ..+.+++..+..|+.||+.||.|||++| +|||||||+|||++ .++.+||+|||+++......
T Consensus 106 ~gg~L~~~l~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~-iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~ 183 (350)
T d1koaa2 106 SGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 183 (350)
T ss_dssp CSCBHHHHHTC-TTSCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEE
T ss_pred CCCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhcC-CeeeeechhHeeeccCCCCeEEEeecchheecccccccc
Confidence 99999999854 2457999999999999999999999999 99999999999996 46889999999998765443
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
...||+.|||||++.+..++.++|||||||++|+|+||+.||.............. .............++.+.+||.
T Consensus 184 ~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~s~~~~~li~ 261 (350)
T d1koaa2 184 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKS--CDWNMDDSAFSGISEDGKDFIR 261 (350)
T ss_dssp EECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--TCCCSCCGGGGGCCHHHHHHHH
T ss_pred eecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHh--CCCCCCcccccCCCHHHHHHHH
Confidence 46789999999999999999999999999999999999999875533322111100 0111111223456778999999
Q ss_pred HhcccCCCCCCCHHHHHHH
Q 010932 296 KCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 296 ~cl~~dp~~Rps~~~ll~~ 314 (497)
+||+.||++|||++++++|
T Consensus 262 ~~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 262 KLLLADPNTRMTIHQALEH 280 (350)
T ss_dssp HHCCSSGGGSCCHHHHHHS
T ss_pred HHccCChhHCcCHHHHhcC
Confidence 9999999999999999986
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-52 Score=407.70 Aligned_cols=245 Identities=21% Similarity=0.244 Sum_probs=212.4
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCC---CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQ---SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
.++|.+++.||+|+||+||+|+.+ +|+.||||++++. .....+.+.+|+.+|+.++|||||++++++.+.+..++|
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence 356788999999999999999975 5999999999743 233467899999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 214 (497)
|||++||+|.+++.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+|+.....
T Consensus 84 ~ey~~gg~L~~~~~~--~~~~~e~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~ 160 (337)
T d1o6la_ 84 MEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred eeccCCCchhhhhhc--ccCCcHHHHHHHHHHHhhhhhhhhhcC-ccccccCHHHeEecCCCCEEEeecccccccccCCc
Confidence 999999999999876 568999999999999999999999999 999999999999999999999999999864332
Q ss_pred --CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 215 --KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 215 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
...+||+.|||||++.+..++.++|||||||++|||++|+.||.......+...... . ...+|...++++.+
T Consensus 161 ~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~----~--~~~~p~~~s~~~~d 234 (337)
T d1o6la_ 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM----E--EIRFPRTLSPEAKS 234 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH----C--CCCCCTTSCHHHHH
T ss_pred ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhc----C--CCCCCccCCHHHHH
Confidence 356899999999999999999999999999999999999999877654433222111 1 12456667888999
Q ss_pred HHHHhcccCCCCCCC-----HHHHHHH
Q 010932 293 LASKCLQYEAKDRPD-----VKFLLSA 314 (497)
Q Consensus 293 li~~cl~~dp~~Rps-----~~~ll~~ 314 (497)
||.+||+.||.+||+ +.++++|
T Consensus 235 li~~~L~~dP~~R~~~~~~~~~eil~H 261 (337)
T d1o6la_ 235 LLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp HHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHHhhccCCchhhcccccccHHHHHcC
Confidence 999999999999994 8888875
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.7e-53 Score=402.09 Aligned_cols=247 Identities=17% Similarity=0.164 Sum_probs=206.7
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC------ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP------DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
.|.+++.||+|+||+||+|+++ +|+.||||+++..... ..+.+.+|+.+|++++|||||++++++.+.+..+|
T Consensus 11 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i 90 (293)
T d1jksa_ 11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL 90 (293)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 4788899999999999999985 5999999998654221 24679999999999999999999999999999999
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC----CeeEcccCCcccc
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG----DPRLSSFGLMKNS 211 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfgla~~~ 211 (497)
|||||+||+|.+++.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++..
T Consensus 91 v~E~~~gg~L~~~i~~--~~~l~~~~~~~~~~qi~~al~yLH~~~-ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~ 167 (293)
T d1jksa_ 91 ILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167 (293)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCccccchhcc--ccccchhHHHHHHHHHHHHHHhhhhcc-eeecccccceEEEecCCCcccceEecchhhhhhc
Confidence 9999999999999976 467999999999999999999999999 99999999999998776 5999999999865
Q ss_pred CCC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHH
Q 010932 212 RDG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288 (497)
Q Consensus 212 ~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (497)
... ....||+.|+|||++.+..++.++|||||||++|||+||+.||.+............ .........+...+.
T Consensus 168 ~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~s~ 245 (293)
T d1jksa_ 168 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSA--VNYEFEDEYFSNTSA 245 (293)
T ss_dssp TTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHT--TCCCCCHHHHTTSCH
T ss_pred CCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHh--cCCCCCchhcCCCCH
Confidence 443 346789999999999999999999999999999999999999876533322111000 000111111234567
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.+.+||.+||+.||++|||+++++++
T Consensus 246 ~~~~li~~~L~~dP~~R~s~~eil~h 271 (293)
T d1jksa_ 246 LAKDFIRRLLVKDPKKRMTIQDSLQH 271 (293)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHHccCChhHCcCHHHHhcC
Confidence 89999999999999999999999985
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.1e-52 Score=402.73 Aligned_cols=244 Identities=18% Similarity=0.243 Sum_probs=211.4
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCC---CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQ---SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 137 (497)
++|.+++.||+|+||+||+|+++ +|+.||||+++.. .....+.+.+|+.+|+.++|||||++++++.+.+..++||
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm 83 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 83 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence 46789999999999999999985 5999999998642 2334678999999999999999999999999999999999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-Cc
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-KS 216 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~ 216 (497)
||++||+|..++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... .+
T Consensus 84 E~~~gg~l~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 160 (316)
T d1fota_ 84 DYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYT 160 (316)
T ss_dssp CCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCC
T ss_pred eecCCccccccccc--cccccccHHHHHHHHHHHhhhhhccCc-EEccccCchheeEcCCCCEEEecCccceEecccccc
Confidence 99999999998876 677899999999999999999999999 999999999999999999999999999876544 45
Q ss_pred cccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHHH
Q 010932 217 YSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASK 296 (497)
Q Consensus 217 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 296 (497)
..||+.|||||++.+..++.++|||||||++|||+||+.||........... +... ...+|...++++.+++.+
T Consensus 161 ~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~s~~~~~li~~ 234 (316)
T d1fota_ 161 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEK----ILNA--ELRFPPFFNEDVKDLLSR 234 (316)
T ss_dssp CCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HHHC--CCCCCTTSCHHHHHHHHH
T ss_pred ccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHH----HHcC--CCCCCCCCCHHHHHHHHH
Confidence 7899999999999999999999999999999999999999876543332221 1111 123455677889999999
Q ss_pred hcccCCCCCC-----CHHHHHHH
Q 010932 297 CLQYEAKDRP-----DVKFLLSA 314 (497)
Q Consensus 297 cl~~dp~~Rp-----s~~~ll~~ 314 (497)
||+.||.+|| |++++++|
T Consensus 235 ~L~~dp~~R~~~~r~t~~~il~H 257 (316)
T d1fota_ 235 LITRDLSQRLGNLQNGTEDVKNH 257 (316)
T ss_dssp HTCSCTTTCTTSSTTTTHHHHTS
T ss_pred HhhhCHHhccccchhhHHHHHcC
Confidence 9999999996 89999986
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-52 Score=394.19 Aligned_cols=252 Identities=19% Similarity=0.251 Sum_probs=201.1
Q ss_pred CcccccccCCCCCCcEEEEEEEcC----CcEEEEEEccCCCCCC-hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN----NRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
+.+++.+.||+|+||+||+|.+.. +..||||+++...... .+.|.+|+.+|++++|||||++++++. .+..++|
T Consensus 7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv 85 (273)
T d1mp8a_ 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 85 (273)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEE
Confidence 467788899999999999999743 4579999987543322 457999999999999999999999996 4678999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 214 (497)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 86 ~E~~~~g~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~ 163 (273)
T d1mp8a_ 86 MELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 163 (273)
T ss_dssp EECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC------------
T ss_pred EEeccCCcHHhhhhc-cCCCCCHHHHHHHHHHHHHHhhhhcccC-eeccccchhheeecCCCcEEEccchhheeccCCcc
Confidence 999999999998765 3567999999999999999999999999 999999999999999999999999999865432
Q ss_pred ---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHHHH
Q 010932 215 ---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290 (497)
Q Consensus 215 ---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (497)
....||+.|+|||++.+..++.++|||||||++|||+| |..|+.......+ ...+......+.++.+++.+
T Consensus 164 ~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~ 238 (273)
T d1mp8a_ 164 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-----IGRIENGERLPMPPNCPPTL 238 (273)
T ss_dssp -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-----HHHHHTTCCCCCCTTCCHHH
T ss_pred eeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHH-----HHHHHcCCCCCCCCCCCHHH
Confidence 23457899999999999999999999999999999998 6766654322221 11111222335566788899
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 291 VELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 291 ~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
.+||.+||+.||++|||+.+|+++|+.+.+.
T Consensus 239 ~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~ 269 (273)
T d1mp8a_ 239 YSLMTKCWAYDPSRRPRFTELKAQLSTILEE 269 (273)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999887643
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.2e-52 Score=400.35 Aligned_cols=252 Identities=18% Similarity=0.242 Sum_probs=207.4
Q ss_pred CcccccccCCCCCCcEEEEEEEcC-Cc----EEEEEEccCCC-CCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKN-NR----LVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~-~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 135 (497)
+++++++.||+|+||+||+|.+.. |+ .||||.++... ....+.|.+|+.+|++++|||||+++|+|.++ ..++
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~ 87 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 87 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence 457889999999999999999753 44 68999887543 33467899999999999999999999999864 5688
Q ss_pred EEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC
Q 010932 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK 215 (497)
Q Consensus 136 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 215 (497)
++||+.+++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 88 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~-iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~ 165 (317)
T d1xkka_ 88 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 165 (317)
T ss_dssp EEECCTTCBHHHHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTC
T ss_pred EEEeccCCcccccccc-cccCCCHHHHHHHHHHHHHHHHHHHHcC-cccCcchhhcceeCCCCCeEeeccccceeccccc
Confidence 8999999999998865 3678999999999999999999999999 9999999999999999999999999998654321
Q ss_pred ------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHHHHH
Q 010932 216 ------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288 (497)
Q Consensus 216 ------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (497)
...||+.|||||++.++.++.++|||||||++|||+| |..||....... +...+....+...|..+++
T Consensus 166 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~-----~~~~i~~~~~~~~p~~~~~ 240 (317)
T d1xkka_ 166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----ISSILEKGERLPQPPICTI 240 (317)
T ss_dssp C--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGG-----HHHHHHHTCCCCCCTTBCH
T ss_pred ccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHH-----HHHHHHcCCCCCCCcccCH
Confidence 2357899999999999999999999999999999999 565554432221 2222333334456677888
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 289 QLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 289 ~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
.+.+|+.+||+.||++|||+.+|+++|..+...
T Consensus 241 ~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~~ 273 (317)
T d1xkka_ 241 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 273 (317)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhCCCChhhCcCHHHHHHHHHHHHhC
Confidence 999999999999999999999999999887654
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.4e-52 Score=398.42 Aligned_cols=252 Identities=21% Similarity=0.295 Sum_probs=209.3
Q ss_pred CcccccccCCCCCCcEEEEEEEc------CCcEEEEEEccCCCCCC-hhHHHHHHHHhccCCCCcceeeeeeeeeCCceE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK------NNRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 134 (497)
+.+.+++.||+|+||+||+|+++ +++.||||+++...... .++|.+|+++|++++||||+++++++......+
T Consensus 13 ~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~ 92 (301)
T d1lufa_ 13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC 92 (301)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred HHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceE
Confidence 45688899999999999999974 35789999997544332 457999999999999999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcce
Q 010932 135 LVAQYMPNDTLSKHLFHWD----------------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRV 192 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Ni 192 (497)
+||||+++|+|.+++.... ...+++..++.|+.||+.||.|||+++ +|||||||+||
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~-ivHrDlKp~NI 171 (301)
T d1lufa_ 93 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRNC 171 (301)
T ss_dssp EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGE
T ss_pred EEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC-eEeeEEcccce
Confidence 9999999999999986421 235899999999999999999999999 99999999999
Q ss_pred EeCCCCCeeEcccCCccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCC-CCchhhHHH
Q 010932 193 LFDEDGDPRLSSFGLMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHI-PPSHALDVI 265 (497)
Q Consensus 193 ll~~~~~~kl~Dfgla~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~-~~~~~~~~~ 265 (497)
|++.++.+||+|||+++..... ....+|+.|+|||.+.+..++.++|||||||++|||++|..| |.......+
T Consensus 172 Lld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~ 251 (301)
T d1lufa_ 172 LVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV 251 (301)
T ss_dssp EECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH
T ss_pred EECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHH
Confidence 9999999999999999754322 245678899999999999999999999999999999999754 443322221
Q ss_pred hccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
. ..+........+..+++++.+|+.+||+.||++|||+.+|++.|+++.
T Consensus 252 ~-----~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~ 300 (301)
T d1lufa_ 252 I-----YYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 300 (301)
T ss_dssp H-----HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred H-----HHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 1 111122233456667888999999999999999999999999999875
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=9.8e-52 Score=403.47 Aligned_cols=245 Identities=16% Similarity=0.158 Sum_probs=211.5
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCC---CCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQ---SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 136 (497)
++.|.+++.||+|+||+||+|.++ +|+.||||++... .....+.+.+|+++|+.++|||||++++++.+....++|
T Consensus 40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v 119 (350)
T d1rdqe_ 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccc
Confidence 457899999999999999999986 5999999998642 233457899999999999999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-C
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-K 215 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~ 215 (497)
|||+.+|+|..++.. .+.+++..+..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... .
T Consensus 120 ~e~~~~g~l~~~l~~--~~~l~e~~~~~i~~qi~~aL~yLH~~~-iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~ 196 (350)
T d1rdqe_ 120 MEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp EECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred cccccccchhhhHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCcCCHHHcccCCCCCEEeeeceeeeecccccc
Confidence 999999999999976 467999999999999999999999999 999999999999999999999999999876543 4
Q ss_pred ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHHHH
Q 010932 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELAS 295 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 295 (497)
...||+.|||||++.+..++.++|||||||++|||+||+.||............ ... ....+...++++.+||.
T Consensus 197 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i----~~~--~~~~p~~~s~~~~~li~ 270 (350)
T d1rdqe_ 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI----VSG--KVRFPSHFSSDLKDLLR 270 (350)
T ss_dssp CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----HHC--CCCCCTTCCHHHHHHHH
T ss_pred cccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHH----hcC--CCCCCccCCHHHHHHHH
Confidence 578999999999999999999999999999999999999998765433222111 111 12345567788999999
Q ss_pred HhcccCCCCCC-----CHHHHHHH
Q 010932 296 KCLQYEAKDRP-----DVKFLLSA 314 (497)
Q Consensus 296 ~cl~~dp~~Rp-----s~~~ll~~ 314 (497)
+||+.||.+|+ |++++++|
T Consensus 271 ~~L~~dP~kR~~~~r~t~~ell~H 294 (350)
T d1rdqe_ 271 NLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp HHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHhhhCHHhccccccccHHHHHcC
Confidence 99999999994 89999985
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.3e-51 Score=389.66 Aligned_cols=249 Identities=17% Similarity=0.165 Sum_probs=209.4
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC---------hhHHHHHHHHhccCC-CCcceeeeeeeee
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD---------PHQFVTEAAGLGNVR-HKRLVNLIGCCAE 129 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---------~~~~~~e~~~l~~l~-h~niv~~~~~~~~ 129 (497)
+++|.+++.||+|+||+||+|++. +|+.||||+++...... .+.+.+|+.+|++++ |||||++++++.+
T Consensus 2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 81 (277)
T d1phka_ 2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 81 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence 567889999999999999999975 59999999997654322 135889999999997 9999999999999
Q ss_pred CCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 130 GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 130 ~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
+++.||||||++||+|.++|.. .+.+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++
T Consensus 82 ~~~~~ivmE~~~~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~ 158 (277)
T d1phka_ 82 NTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGFSC 158 (277)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CcceEEEEEcCCCchHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcC-CcccccccceEEEcCCCCeEEccchhee
Confidence 9999999999999999999976 568999999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCC---CccccCCCCCCcccccc------CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCC
Q 010932 210 NSRDG---KSYSTNLAYTPPEFLRT------GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEG 280 (497)
Q Consensus 210 ~~~~~---~~~~gt~~y~aPE~~~~------~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (497)
..... ....||+.|+|||++.+ ..++.++||||+||++|||+||+.||............... ......
T Consensus 159 ~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~--~~~~~~ 236 (277)
T d1phka_ 159 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG--NYQFGS 236 (277)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--CCCCCT
T ss_pred EccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhC--CCCCCC
Confidence 65543 34678999999999863 34688999999999999999999998765433322111111 111122
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 281 QYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 281 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
......++++.+|+.+||+.||++|||+.+|+++
T Consensus 237 ~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h 270 (277)
T d1phka_ 237 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 270 (277)
T ss_dssp TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred cccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 2334678899999999999999999999999875
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-51 Score=397.64 Aligned_cols=256 Identities=19% Similarity=0.269 Sum_probs=210.0
Q ss_pred CCCcccccccCCCCCCcEEEEEEEcC-Cc--EEEEEEccCC-CCCChhHHHHHHHHhccC-CCCcceeeeeeeeeCCceE
Q 010932 60 GFSSELIVSESGDKAPNVVYRGRLKN-NR--LVAIKRFSRQ-SWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 60 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~--~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 134 (497)
+|+++.+.+.||+|+||+||+|.+++ |. .||||+++.. .....+.|.+|+++|.++ +|||||+++|++.+.+..+
T Consensus 8 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~ 87 (309)
T d1fvra_ 8 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 87 (309)
T ss_dssp CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred CHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence 45667778889999999999999764 44 5788888644 333466899999999998 7999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcC--------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCe
Q 010932 135 LVAQYMPNDTLSKHLFHW--------------DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDP 200 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~ 200 (497)
+||||+++|+|.++|... ....+++..+..++.||+.||.|+|+++ ++||||||+|||++.++.+
T Consensus 88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~-iiHrDlkp~NIL~~~~~~~ 166 (309)
T d1fvra_ 88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVA 166 (309)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCE
T ss_pred EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC-ccccccccceEEEcCCCce
Confidence 999999999999999653 2467999999999999999999999999 9999999999999999999
Q ss_pred eEcccCCccccCCC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCC-CchhhHHHhcccccccccc
Q 010932 201 RLSSFGLMKNSRDG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP-PSHALDVIRGKNLLLLMDS 276 (497)
Q Consensus 201 kl~Dfgla~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~-~~~~~~~~~~~~~~~~~~~ 276 (497)
||+|||+++..... ....||+.|+|||.+.++.++.++|||||||++|||++|..|| .......+ ...+..
T Consensus 167 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~-----~~~i~~ 241 (309)
T d1fvra_ 167 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL-----YEKLPQ 241 (309)
T ss_dssp EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-----HHHGGG
T ss_pred EEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHH-----HHHHHh
Confidence 99999999754432 3456889999999999999999999999999999999987654 33222221 111222
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 277 SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 277 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
..+.+.+..+++++.+||.+||+.||++|||+.+|+++|+.+.+.
T Consensus 242 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~ 286 (309)
T d1fvra_ 242 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 286 (309)
T ss_dssp TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred cCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 334455667888999999999999999999999999999988653
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=2.2e-51 Score=389.68 Aligned_cols=253 Identities=17% Similarity=0.185 Sum_probs=204.5
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC---hhHHHHHHHHhccCCCCcceeeeeeeeeCCc----e
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE----R 133 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----~ 133 (497)
++|.+++.||+|+||+||+|.+. +|+.||||+++.....+ .+.|.+|+++|+.++|||||++++++...+. .
T Consensus 7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~ 86 (277)
T d1o6ya_ 7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 86 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence 35788899999999999999975 59999999998655443 3468999999999999999999999977543 7
Q ss_pred EEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC
Q 010932 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD 213 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 213 (497)
||||||++|++|..++.. .+.+++..++.++.||+.||.|||++| ++||||||+|||++.++.++|+|||.+.....
T Consensus 87 ~lvmE~~~g~~L~~~~~~--~~~l~~~~~~~i~~qi~~al~~lH~~~-iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~ 163 (277)
T d1o6ya_ 87 YIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIAD 163 (277)
T ss_dssp EEEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTSCEEECCCTTCEECC-
T ss_pred EEEEECCCCCEehhhhcc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCccccCcccccCccccceeehhhhhhhhcc
Confidence 899999999999998865 568999999999999999999999999 99999999999999999999999998864332
Q ss_pred C-------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHH
Q 010932 214 G-------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANED 286 (497)
Q Consensus 214 ~-------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (497)
. ....||+.|||||++.+..++.++|||||||++|||+||+.||............+.. +...........
T Consensus 164 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 241 (277)
T d1o6ya_ 164 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE--DPIPPSARHEGL 241 (277)
T ss_dssp ---------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC--CCCCGGGTSSSC
T ss_pred ccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhc--CCCCCchhccCC
Confidence 2 3457899999999999999999999999999999999999998765333222111111 011111223346
Q ss_pred HHHHHHHHHHhcccCCCCCC-CHHHHHHHhhhhh
Q 010932 287 ATQLVELASKCLQYEAKDRP-DVKFLLSAVAPLQ 319 (497)
Q Consensus 287 ~~~l~~li~~cl~~dp~~Rp-s~~~ll~~l~~~~ 319 (497)
++.+.+||.+||+.||++|| |++++++.|.++.
T Consensus 242 s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~ 275 (277)
T d1o6ya_ 242 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 275 (277)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence 77899999999999999999 8999999888764
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-51 Score=398.01 Aligned_cols=247 Identities=16% Similarity=0.127 Sum_probs=200.1
Q ss_pred Cccccccc-CCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccC-CCCcceeeeeeeee----CCceE
Q 010932 62 SSELIVSE-SGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNV-RHKRLVNLIGCCAE----GDERL 134 (497)
Q Consensus 62 ~~~~~~~~-lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~----~~~~~ 134 (497)
+.|.++++ ||+|+||+||+|.+. +|+.||||+++. ...+.+|+.++.++ +|||||++++++.+ ....|
T Consensus 11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ 85 (335)
T d2ozaa1 11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 85 (335)
T ss_dssp GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence 35677765 899999999999975 599999999863 35688999987554 89999999999875 35689
Q ss_pred EEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC---CCCeeEcccCCcccc
Q 010932 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE---DGDPRLSSFGLMKNS 211 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~ 211 (497)
||||||+||+|.+++.......+++..+..|+.||+.||.|||++| |+||||||+|||++. ++.+||+|||+++..
T Consensus 86 ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~-iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~ 164 (335)
T d2ozaa1 86 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 164 (335)
T ss_dssp EEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcC-Cccccccccccccccccccccccccccceeeec
Confidence 9999999999999997655568999999999999999999999999 999999999999985 567999999999865
Q ss_pred CCC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccC--CCCCHHH
Q 010932 212 RDG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLE--GQYANED 286 (497)
Q Consensus 212 ~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 286 (497)
... ....||+.|||||++.+..++.++|||||||++|+|+||+.||...............+...... .......
T Consensus 165 ~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 244 (335)
T d2ozaa1 165 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 244 (335)
T ss_dssp CCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHS
T ss_pred cCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccC
Confidence 433 35679999999999999999999999999999999999999986543221111111111111111 1112356
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 287 ATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 287 ~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
++++.+||.+||+.||++|||+.+++++
T Consensus 245 s~~~~~li~~~L~~dP~~R~s~~eil~h 272 (335)
T d2ozaa1 245 SEEVKMLIRNLLKTEPTQRMTITEFMNH 272 (335)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 7889999999999999999999999986
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-51 Score=388.08 Aligned_cols=251 Identities=18% Similarity=0.245 Sum_probs=199.3
Q ss_pred CCcccccccCCCCCCcEEEEEEEcC--C--cEEEEEEccCCCCCC---hhHHHHHHHHhccCCCCcceeeeeeeeeCCce
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKN--N--RLVAIKRFSRQSWPD---PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~--~--~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 133 (497)
..++.++++||+|+||.||+|++.. + ..||||+++...... .+.|.+|+.+|++++|||||+++|++.+ ...
T Consensus 7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~ 85 (273)
T d1u46a_ 7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPM 85 (273)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cch
Confidence 3567889999999999999998642 3 378999997643322 4579999999999999999999999976 467
Q ss_pred EEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC
Q 010932 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD 213 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 213 (497)
++||||+++|+|.+.+... .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 86 ~lv~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~ 163 (273)
T d1u46a_ 86 KMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163 (273)
T ss_dssp EEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred heeeeeecCcchhhhhhcc-cCCCCHHHHHHHHHHHHHHHHHhhhCC-EeeeeecHHHhccccccceeeccchhhhhccc
Confidence 8999999999999887653 457999999999999999999999999 99999999999999999999999999986544
Q ss_pred CC-------ccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccccccccccccCCCCCHH
Q 010932 214 GK-------SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANE 285 (497)
Q Consensus 214 ~~-------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (497)
.. ...+|+.|+|||++.+..++.++|||||||++|||+| |+.||......... ..+.......+.+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~ 239 (273)
T d1u46a_ 164 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL----HKIDKEGERLPRPED 239 (273)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH----HHHHTSCCCCCCCTT
T ss_pred CCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHH----HHHHhCCCCCCCccc
Confidence 32 2356789999999999999999999999999999998 78887654333321 112222333345566
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhh
Q 010932 286 DATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318 (497)
Q Consensus 286 ~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~ 318 (497)
++..+.+|+.+||+.||++|||+.+|++.|+..
T Consensus 240 ~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 240 CPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 778899999999999999999999999988764
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-51 Score=396.33 Aligned_cols=257 Identities=18% Similarity=0.247 Sum_probs=200.3
Q ss_pred cCCCcccccccCCCCCCcEEEEEEEcC------CcEEEEEEccCCCCC-ChhHHHHHHHHhccC-CCCcceeeeeeeeeC
Q 010932 59 NGFSSELIVSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNV-RHKRLVNLIGCCAEG 130 (497)
Q Consensus 59 ~~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 130 (497)
-..+++.+++.||+|+||+||+|.+.. ++.||||+++..... ..+.+.+|+..+.++ +|+|||.+++++...
T Consensus 10 i~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~ 89 (299)
T d1ywna1 10 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 89 (299)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred ccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccC
Confidence 344678889999999999999999642 468999999754332 245688888888777 689999999998664
Q ss_pred -CceEEEEEcCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC
Q 010932 131 -DERLLVAQYMPNDTLSKHLFHWD--------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD 195 (497)
Q Consensus 131 -~~~~lv~e~~~~~~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~ 195 (497)
...++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ ||||||||+||||+
T Consensus 90 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~-ivHrDlKp~NILl~ 168 (299)
T d1ywna1 90 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLS 168 (299)
T ss_dssp TSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEC
T ss_pred CCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC-CcCCcCCccceeEC
Confidence 46899999999999999996431 245899999999999999999999999 99999999999999
Q ss_pred CCCCeeEcccCCccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCC-CCchhhHHHhcc
Q 010932 196 EDGDPRLSSFGLMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHI-PPSHALDVIRGK 268 (497)
Q Consensus 196 ~~~~~kl~Dfgla~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~-~~~~~~~~~~~~ 268 (497)
.++++||+|||+|+..... ....||+.|||||++.+..++.++|||||||++|||+||..| |.......
T Consensus 169 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~---- 244 (299)
T d1ywna1 169 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE---- 244 (299)
T ss_dssp GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH----
T ss_pred CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHH----
Confidence 9999999999999754322 235689999999999999999999999999999999998654 43321111
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 269 NLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
.+...+........+..+++++.+|+.+||+.||++|||+.+|+++|+.+.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq 296 (299)
T d1ywna1 245 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 296 (299)
T ss_dssp HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 1112222233445566678889999999999999999999999999998754
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-51 Score=395.27 Aligned_cols=247 Identities=17% Similarity=0.201 Sum_probs=207.8
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
|+.|.+++.||+|+||+||+|.++ +|+.||||+++... .+...+.+|+++|+.++|||||++++++.+.+..||||||
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~ 82 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence 677899999999999999999986 58999999997643 2345688999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC--CCCeeEcccCCccccCCCC--
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE--DGDPRLSSFGLMKNSRDGK-- 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~--~~~~kl~Dfgla~~~~~~~-- 215 (497)
|+||+|.+++... +..+++..+..++.||+.||.|||++| |+||||||+|||++. .+.+||+|||+++......
T Consensus 83 ~~gg~L~~~i~~~-~~~l~e~~~~~i~~qi~~al~yLH~~~-iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~ 160 (321)
T d1tkia_ 83 ISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF 160 (321)
T ss_dssp CCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred CCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHcC-CCcccccccceeecCCCceEEEEcccchhhccccCCcc
Confidence 9999999999652 447999999999999999999999999 999999999999985 4589999999998765443
Q ss_pred -ccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccC--CCCCHHHHHHHHH
Q 010932 216 -SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLE--GQYANEDATQLVE 292 (497)
Q Consensus 216 -~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~ 292 (497)
...+|+.|+|||.+.+..++.++|||||||++|+|++|..||........... +...... .......++++.+
T Consensus 161 ~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~----i~~~~~~~~~~~~~~~s~~~~~ 236 (321)
T d1tkia_ 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIEN----IMNAEYTFDEEAFKEISIEAMD 236 (321)
T ss_dssp EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HHHTCCCCCHHHHTTSCHHHHH
T ss_pred cccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHH----HHhCCCCCChhhccCCCHHHHH
Confidence 45688999999999999999999999999999999999999876543322211 1111110 0111235678999
Q ss_pred HHHHhcccCCCCCCCHHHHHHH
Q 010932 293 LASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~~ll~~ 314 (497)
|+.+||+.||++|||+.++++|
T Consensus 237 li~~~L~~dp~~R~s~~eil~h 258 (321)
T d1tkia_ 237 FVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHccCChhHCcCHHHHhcC
Confidence 9999999999999999999985
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=6.2e-51 Score=399.89 Aligned_cols=248 Identities=18% Similarity=0.176 Sum_probs=203.3
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCC---CCChhHHHH---HHHHhccCCCCcceeeeeeeeeCCce
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQS---WPDPHQFVT---EAAGLGNVRHKRLVNLIGCCAEGDER 133 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~---e~~~l~~l~h~niv~~~~~~~~~~~~ 133 (497)
.++|.+++.||+|+||+||+|+++ +|+.||||++.... ......+.+ ++.+++.++|||||++++++.+.+..
T Consensus 3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~ 82 (364)
T d1omwa3 3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 82 (364)
T ss_dssp STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence 356788999999999999999986 59999999986421 122233444 47778888999999999999999999
Q ss_pred EEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC
Q 010932 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD 213 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 213 (497)
|+||||++||+|.+++.. ...+++..+..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+|+....
T Consensus 83 ~ivmE~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~ylH~~~-iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~ 159 (364)
T d1omwa3 83 SFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSK 159 (364)
T ss_dssp EEEECCCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSSSCEEECCCTTCEECSS
T ss_pred EEEEEecCCCcHHHHHHh--cccccHHHHHHHHHHHHHHHHHHHHCC-ccceeeccceeEEcCCCcEEEeeeceeeecCC
Confidence 999999999999999976 567899999999999999999999999 99999999999999999999999999986544
Q ss_pred C--CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHH
Q 010932 214 G--KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290 (497)
Q Consensus 214 ~--~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (497)
. ....||+.|||||++.. ..++.++|||||||+||||+||+.||.......... +.. .........+...++++
T Consensus 160 ~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~--~~~-~~~~~~~~~~~~~s~~~ 236 (364)
T d1omwa3 160 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--IDR-MTLTMAVELPDSFSPEL 236 (364)
T ss_dssp SCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHH--HHH-HSSSCCCCCCSSSCHHH
T ss_pred CcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHH--HHH-hcccCCCCCCCCCCHHH
Confidence 3 45679999999999975 468999999999999999999999986532111100 000 01111223455677889
Q ss_pred HHHHHHhcccCCCCCCC-----HHHHHHH
Q 010932 291 VELASKCLQYEAKDRPD-----VKFLLSA 314 (497)
Q Consensus 291 ~~li~~cl~~dp~~Rps-----~~~ll~~ 314 (497)
.+||.+||+.||++||| ++++++|
T Consensus 237 ~~li~~~L~~dP~~R~t~~~~~a~eil~H 265 (364)
T d1omwa3 237 RSLLEGLLQRDVNRRLGCLGRGAQEVKES 265 (364)
T ss_dssp HHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred HHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence 99999999999999999 6888876
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-51 Score=394.89 Aligned_cols=244 Identities=19% Similarity=0.235 Sum_probs=206.5
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCC---CCCChhHHHHHHHHhc-cCCCCcceeeeeeeeeCCceEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQ---SWPDPHQFVTEAAGLG-NVRHKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~-~l~h~niv~~~~~~~~~~~~~lv 136 (497)
++|.+++.||+|+||+||+|.++ +|+.||||++++. .....+.+..|+.++. .++|||||++++++.+++..|||
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 46788899999999999999986 5999999999643 2234566778877765 68999999999999999999999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC--
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG-- 214 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 214 (497)
|||+++|+|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 82 mEy~~~g~L~~~i~~--~~~~~e~~~~~~~~qi~~al~ylH~~~-iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~ 158 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 158 (320)
T ss_dssp EECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred EeecCCCcHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCcccceeecCCCceeccccchhhhcccccc
Confidence 999999999999975 567999999999999999999999999 999999999999999999999999999854332
Q ss_pred --CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHH
Q 010932 215 --KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292 (497)
Q Consensus 215 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (497)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.+.....+..... . ....+|...++.+.+
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~----~--~~~~~p~~~s~~~~d 232 (320)
T d1xjda_ 159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR----M--DNPFYPRWLEKEAKD 232 (320)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH----H--CCCCCCTTSCHHHHH
T ss_pred cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHH----c--CCCCCCccCCHHHHH
Confidence 34678999999999999999999999999999999999999987654333222111 1 122445567788999
Q ss_pred HHHHhcccCCCCCCCHH-HHHHH
Q 010932 293 LASKCLQYEAKDRPDVK-FLLSA 314 (497)
Q Consensus 293 li~~cl~~dp~~Rps~~-~ll~~ 314 (497)
||.+||+.||++|||+. ++++|
T Consensus 233 li~~~L~~dP~~R~s~~~~l~~h 255 (320)
T d1xjda_ 233 LLVKLFVREPEKRLGVRGDIRQH 255 (320)
T ss_dssp HHHHHSCSSGGGSBTTBSCGGGS
T ss_pred HHHHhcccCCCCCcCHHHHHHhC
Confidence 99999999999999985 67653
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-50 Score=389.06 Aligned_cols=248 Identities=20% Similarity=0.301 Sum_probs=203.7
Q ss_pred ccCCCCCCcEEEEEEEcC--C--cEEEEEEccCCCC-CChhHHHHHHHHhccCCCCcceeeeeeeeeC-CceEEEEEcCC
Q 010932 68 SESGDKAPNVVYRGRLKN--N--RLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG-DERLLVAQYMP 141 (497)
Q Consensus 68 ~~lg~G~~g~V~~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~~~ 141 (497)
..||+|+||+||+|.+.+ + ..||||+++.... ...++|.+|+++|++++|||||+++|++... ...++||||++
T Consensus 33 ~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~ 112 (311)
T d1r0pa_ 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 112 (311)
T ss_dssp EEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCT
T ss_pred eEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEee
Confidence 357999999999999754 2 3699999975332 2346799999999999999999999998764 57899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC-------
Q 010932 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG------- 214 (497)
Q Consensus 142 ~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------- 214 (497)
+|+|.+++.. ....+++..++.++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 113 ~g~l~~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~~-iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~ 190 (311)
T d1r0pa_ 113 HGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN 190 (311)
T ss_dssp TCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTC
T ss_pred cCchhhhhcc-ccccchHHHHHHHHHHHHHhhhhhcccC-cccCCccHHhEeECCCCCEEEecccchhhcccccccccee
Confidence 9999998865 3567889999999999999999999999 999999999999999999999999999864332
Q ss_pred -CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHHHHHHHH
Q 010932 215 -KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVEL 293 (497)
Q Consensus 215 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 293 (497)
....||+.|+|||.+.++.++.++|||||||++|||+||+.||...... ..+...+....+...|..+++.+.+|
T Consensus 191 ~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~----~~~~~~i~~g~~~~~p~~~~~~l~~l 266 (311)
T d1r0pa_ 191 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT----FDITVYLLQGRRLLQPEYCPDPLYEV 266 (311)
T ss_dssp TTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC----------CHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred cccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCH----HHHHHHHHcCCCCCCcccCcHHHHHH
Confidence 1245788999999999999999999999999999999988887643211 11111111222334556677889999
Q ss_pred HHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 294 ASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 294 i~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
+.+||+.||++|||+.+|+++|+.+...
T Consensus 267 i~~cl~~dP~~RPs~~ei~~~L~~i~~~ 294 (311)
T d1r0pa_ 267 MLKCWHPKAEMRPSFSELVSRISAIFST 294 (311)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999998754
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-50 Score=386.09 Aligned_cols=254 Identities=19% Similarity=0.307 Sum_probs=207.5
Q ss_pred CCcccccccCCCCCCcEEEEEEEcC--------CcEEEEEEccCCCCC-ChhHHHHHHHHhccC-CCCcceeeeeeeeeC
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLKN--------NRLVAIKRFSRQSWP-DPHQFVTEAAGLGNV-RHKRLVNLIGCCAEG 130 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 130 (497)
.+++.+++.||+|+||.||+|+... +..||||+++..... ....+.+|+..+.++ +|||||+++++|.++
T Consensus 12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~ 91 (299)
T d1fgka_ 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 91 (299)
T ss_dssp GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence 3577888999999999999998632 247999999765432 246788999999888 799999999999999
Q ss_pred CceEEEEEcCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC
Q 010932 131 DERLLVAQYMPNDTLSKHLFHWD--------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE 196 (497)
Q Consensus 131 ~~~~lv~e~~~~~~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~ 196 (497)
...++||||+++|+|.++|.... ...+++..++.++.||+.||.|||+++ +|||||||+|||++.
T Consensus 92 ~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~-ivHrDiKp~NiLl~~ 170 (299)
T d1fgka_ 92 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTE 170 (299)
T ss_dssp SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECT
T ss_pred CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC-EEeeeecccceeecC
Confidence 99999999999999999997542 246899999999999999999999999 999999999999999
Q ss_pred CCCeeEcccCCccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhh-CCCCCCchhhHHHhccc
Q 010932 197 DGDPRLSSFGLMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGKN 269 (497)
Q Consensus 197 ~~~~kl~Dfgla~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~ 269 (497)
++.+||+|||+++..... ....+|+.|+|||.+.++.++.++|||||||++|||+| |..||.......+
T Consensus 171 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~---- 246 (299)
T d1fgka_ 171 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL---- 246 (299)
T ss_dssp TCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH----
T ss_pred CCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHH----
Confidence 999999999999854332 23567899999999999999999999999999999998 5655544333222
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 270 LLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
...+........+..+++++.+||.+||+.||++|||+.+|++.|+.+..
T Consensus 247 -~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a 296 (299)
T d1fgka_ 247 -FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296 (299)
T ss_dssp -HHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -HHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence 12233334445566778889999999999999999999999999988753
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-50 Score=387.86 Aligned_cols=246 Identities=20% Similarity=0.179 Sum_probs=195.0
Q ss_pred ccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC-----hhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 66 IVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD-----PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 66 ~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
.++.||+|+||+||+|.++ +|+.||||+++...... .+.+.+|+.+|++++|||||++++++.+.++.+|||||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~ 81 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 81 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence 3567899999999999975 59999999997543221 35789999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----C
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----K 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 215 (497)
+.++++..++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~~~~~~~~~~~--~~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~ 158 (299)
T d1ua2a_ 82 METDLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYT 158 (299)
T ss_dssp CSEEHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCC
T ss_pred hcchHHhhhhhc--ccCCCHHHHHHHHHHHHHHHHHhhccc-eecccCCcceEEecCCCccccccCccccccCCCccccc
Confidence 998877766543 567999999999999999999999999 999999999999999999999999999765432 3
Q ss_pred ccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccc--------------cccccc---c
Q 010932 216 SYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNL--------------LLLMDS---S 277 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~--------------~~~~~~---~ 277 (497)
...||+.|+|||++.+. .++.++|||||||++|||+||..||............. ...... .
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T d1ua2a_ 159 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK 238 (299)
T ss_dssp CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCC
T ss_pred ceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhc
Confidence 45789999999998754 57999999999999999999998886543221110000 000000 0
Q ss_pred cCCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 278 LEGQY-----ANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 278 ~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..... ....++++.+|+.+||+.||++|||++|+|+|
T Consensus 239 ~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H 280 (299)
T d1ua2a_ 239 SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 280 (299)
T ss_dssp CCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence 00011 12346789999999999999999999999975
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-50 Score=387.09 Aligned_cols=253 Identities=21% Similarity=0.298 Sum_probs=209.2
Q ss_pred CcccccccCCCCCCcEEEEEEEc------CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK------NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL 134 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 134 (497)
+++.+++.||+|+||+||+|.++ +++.||||+++..... ....|.+|++++++++|||||++++++......+
T Consensus 20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~ 99 (308)
T d1p4oa_ 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 99 (308)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence 45678888999999999999874 2578999999754322 2346899999999999999999999999999999
Q ss_pred EEEEcCCCCChhhhhhcC--------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccC
Q 010932 135 LVAQYMPNDTLSKHLFHW--------DKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFG 206 (497)
Q Consensus 135 lv~e~~~~~~L~~~l~~~--------~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg 206 (497)
+||||+++|+|.+++... ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++++||+|||
T Consensus 100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~-ivHrDlk~~NiLld~~~~~Kl~DFG 178 (308)
T d1p4oa_ 100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFG 178 (308)
T ss_dssp EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTT
T ss_pred EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeeceEcCCceeecCCceEEEeecc
Confidence 999999999999988642 1245799999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCC-CchhhHHHhccccccccccccC
Q 010932 207 LMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP-PSHALDVIRGKNLLLLMDSSLE 279 (497)
Q Consensus 207 la~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~-~~~~~~~~~~~~~~~~~~~~~~ 279 (497)
+++..... ....+|+.|+|||.+.+..++.++|||||||++|||+||..+| .......+. ..+. ....
T Consensus 179 la~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~----~~i~-~~~~ 253 (308)
T d1p4oa_ 179 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL----RFVM-EGGL 253 (308)
T ss_dssp CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHH----HHHH-TTCC
T ss_pred cceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHH----HHHH-hCCC
Confidence 99854332 2345789999999999999999999999999999999997544 332222111 1111 2223
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 280 GQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 280 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
...+..+++.+.+|+.+||+.||++|||+.+|+++|+....
T Consensus 254 ~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~ 294 (308)
T d1p4oa_ 254 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 294 (308)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 34556677889999999999999999999999999987754
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-49 Score=381.57 Aligned_cols=251 Identities=20% Similarity=0.272 Sum_probs=199.8
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
+.|.+++.||+|+||+||+|.+. +|+.||||+++.... ...+++.+|+++|++++|||||++++++.++.+.++|||
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e 81 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence 46788999999999999999975 599999999965432 235789999999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---- 214 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 214 (497)
|+.++ +..++.......+++..+..++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~~~-~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~-IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~ 159 (298)
T d1gz8a_ 82 FLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159 (298)
T ss_dssp CCSEE-HHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCT
T ss_pred ecCCc-hhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCC-EEccccCchheeecccCcceeccCCcceeccCCcccc
Confidence 99654 555554445678999999999999999999999999 999999999999999999999999999765432
Q ss_pred CccccCCCCCCccccccCC-CCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccc-----------cccc-ccccCCC
Q 010932 215 KSYSTNLAYTPPEFLRTGR-VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNL-----------LLLM-DSSLEGQ 281 (497)
Q Consensus 215 ~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~-----------~~~~-~~~~~~~ 281 (497)
....||+.|+|||.+.... ++.++|||||||++|+|++|+.||............. .... .......
T Consensus 160 ~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 239 (298)
T d1gz8a_ 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239 (298)
T ss_dssp TCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred eeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccc
Confidence 3457899999999987665 5789999999999999999999986543221110000 0000 0000000
Q ss_pred -----------CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 282 -----------YANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 282 -----------~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.....+.++.+|+.+||+.||++|||+.+++++
T Consensus 240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H 283 (298)
T d1gz8a_ 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283 (298)
T ss_dssp SCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 012345789999999999999999999999986
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-50 Score=387.52 Aligned_cols=254 Identities=19% Similarity=0.291 Sum_probs=211.0
Q ss_pred CcccccccCCCCCCcEEEEEEEc------CCcEEEEEEccCCCCC-ChhHHHHHHHHhccC-CCCcceeeeeeeeeCCce
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK------NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNV-RHKRLVNLIGCCAEGDER 133 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 133 (497)
+++.+.+.||+|+||.||+|.++ +++.||||+++..... ....|.+|+.+++++ +|||||++++++.+....
T Consensus 23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~ 102 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (311)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEE
Confidence 45677788999999999999862 3679999999765432 245789999999999 699999999999999999
Q ss_pred EEEEEcCCCCChhhhhhcCC----------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCC
Q 010932 134 LLVAQYMPNDTLSKHLFHWD----------------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~----------------~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~ 197 (497)
++||||+++|+|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.+
T Consensus 103 ~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~-ivHrDLKp~NIl~~~~ 181 (311)
T d1t46a_ 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHG 181 (311)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETT
T ss_pred EEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccccccccccccc
Confidence 99999999999999986532 236899999999999999999999999 9999999999999999
Q ss_pred CCeeEcccCCccccCCC------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCch-hhHHHhcccc
Q 010932 198 GDPRLSSFGLMKNSRDG------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSH-ALDVIRGKNL 270 (497)
Q Consensus 198 ~~~kl~Dfgla~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~-~~~~~~~~~~ 270 (497)
+.+||+|||+++..... ....||+.|+|||++.++.++.++|||||||++|||+|++.|+... ... ..+
T Consensus 182 ~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~----~~~ 257 (311)
T d1t46a_ 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD----SKF 257 (311)
T ss_dssp TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS----HHH
T ss_pred CcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHH----HHH
Confidence 99999999999865443 2356789999999999999999999999999999999966554322 111 111
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhc
Q 010932 271 LLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQK 320 (497)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~ 320 (497)
..++....+...+...+..+.+||.+||+.||++|||+.+|++.|+++..
T Consensus 258 ~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~ 307 (311)
T d1t46a_ 258 YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (311)
T ss_dssp HHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhc
Confidence 22333344445566678889999999999999999999999999987653
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-50 Score=381.21 Aligned_cols=238 Identities=21% Similarity=0.323 Sum_probs=199.6
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC------ChhHHHHHHHHhccCC--CCcceeeeeeeeeCCc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP------DPHQFVTEAAGLGNVR--HKRLVNLIGCCAEGDE 132 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~ 132 (497)
++|.+.+.||+|+||+||+|++. +|+.||||++...... ...++.+|+.+|++++ |||||++++++.+.+.
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~ 83 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 83 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence 35788889999999999999975 5999999998754322 2245789999999986 8999999999999999
Q ss_pred eEEEEEcCCC-CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC-CCCeeEcccCCccc
Q 010932 133 RLLVAQYMPN-DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE-DGDPRLSSFGLMKN 210 (497)
Q Consensus 133 ~~lv~e~~~~-~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~~ 210 (497)
.++||||+.+ +++.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++.
T Consensus 84 ~~lv~e~~~~~~~l~~~~~~--~~~l~e~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NIll~~~~~~vkl~DFG~a~~ 160 (273)
T d1xwsa_ 84 FVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGAL 160 (273)
T ss_dssp EEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEEEeccCcchHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccccCcccceEEecCCCeEEECcccccee
Confidence 9999999976 577777765 568999999999999999999999999 999999999999985 57899999999986
Q ss_pred cCCC--CccccCCCCCCccccccCCC-CcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCHHHH
Q 010932 211 SRDG--KSYSTNLAYTPPEFLRTGRV-IPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287 (497)
Q Consensus 211 ~~~~--~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (497)
.... .+..||+.|+|||++.+..+ +.++|||||||++|||+||+.||..... .... ...++...+
T Consensus 161 ~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~-i~~~-----------~~~~~~~~s 228 (273)
T d1xwsa_ 161 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-IIRG-----------QVFFRQRVS 228 (273)
T ss_dssp CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-HHHC-----------CCCCSSCCC
T ss_pred cccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH-Hhhc-----------ccCCCCCCC
Confidence 5443 45689999999999987765 5679999999999999999998865421 1111 112334466
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 288 TQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 288 ~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
+++.+||.+||+.||++|||+++++++
T Consensus 229 ~~~~~li~~~L~~dp~~R~s~~eil~h 255 (273)
T d1xwsa_ 229 SECQHLIRWCLALRPSDRPTFEEIQNH 255 (273)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence 789999999999999999999999985
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=2e-49 Score=378.16 Aligned_cols=250 Identities=17% Similarity=0.209 Sum_probs=201.3
Q ss_pred CcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEEc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQY 139 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 139 (497)
+.|.++++||+|+||+||+|.+++|+.||||+++.... ...+.+.+|+.+|++++|||||++++++...+..++++|+
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~ 81 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence 46788999999999999999998899999999965432 2357899999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCC----C
Q 010932 140 MPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG----K 215 (497)
Q Consensus 140 ~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 215 (497)
+.++.+..+... .+.+++..+..++.||+.||.|||+.+ ||||||||+|||++.++.+||+|||.+...... .
T Consensus 82 ~~~~~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~-IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 158 (286)
T d1ob3a_ 82 LDQDLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT 158 (286)
T ss_dssp CSEEHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred ehhhhHHHHHhh--cCCcchhhhHHHHHHHHHHHHHhccCc-EEecCCCCceeeEcCCCCEEecccccceecccCccccc
Confidence 987766666543 678999999999999999999999999 999999999999999999999999998764432 3
Q ss_pred ccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccc--------------cccc-------
Q 010932 216 SYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKN--------------LLLL------- 273 (497)
Q Consensus 216 ~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~--------------~~~~------- 273 (497)
...+++.|+|||.+.+. .++.++|||||||++|||++|+.||............ ....
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T d1ob3a_ 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (286)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred eecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhccccc
Confidence 44688999999999764 5689999999999999999999988654221110000 0000
Q ss_pred --cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 274 --MDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 274 --~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.............++.+.+|+.+||+.||++|||++++++|
T Consensus 239 ~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H 281 (286)
T d1ob3a_ 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (286)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00000111233456789999999999999999999999875
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-49 Score=378.12 Aligned_cols=251 Identities=18% Similarity=0.244 Sum_probs=194.6
Q ss_pred ccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHH--HHHHHhccCCCCcceeeeeeeeeCC----ceEEEE
Q 010932 64 ELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFV--TEAAGLGNVRHKRLVNLIGCCAEGD----ERLLVA 137 (497)
Q Consensus 64 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~--~e~~~l~~l~h~niv~~~~~~~~~~----~~~lv~ 137 (497)
+.+.++||+|+||+||+|++ +|+.||||+++... .+.+. .|+..+..++|||||++++++.+.+ ..++||
T Consensus 5 ~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~ 80 (303)
T d1vjya_ 5 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp EEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred EEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEE
Confidence 34556789999999999997 58999999996432 33444 4555667789999999999997654 579999
Q ss_pred EcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc--------CCCcccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNS--------QNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 138 e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~--------~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
||+++|+|.++|.. ..+++..+..++.|++.||.|+|+ ++ |+||||||+||||+.++.+||+|||+++
T Consensus 81 Ey~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~-IvHrDlKp~NILl~~~~~~Kl~DFGl~~ 156 (303)
T d1vjya_ 81 DYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp ECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred ecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-eeccccCccceEEcCCCCeEEEecCccc
Confidence 99999999999964 479999999999999999999997 46 9999999999999999999999999998
Q ss_pred ccCCC--------CccccCCCCCCccccccC------CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc-------
Q 010932 210 NSRDG--------KSYSTNLAYTPPEFLRTG------RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK------- 268 (497)
Q Consensus 210 ~~~~~--------~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~------- 268 (497)
..... ....||+.|||||++.+. .++.++|||||||+||||+||..|+...........
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T d1vjya_ 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp EEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred cccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccc
Confidence 54322 245689999999998754 367799999999999999999876532110000000
Q ss_pred ----ccccccccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhccc
Q 010932 269 ----NLLLLMDSSLEGQYA-----NEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQT 322 (497)
Q Consensus 269 ----~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~~ 322 (497)
......+...++..+ ...+..+.+|+.+||+.||++|||+.+|++.|+.+..+.
T Consensus 237 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~ 299 (303)
T d1vjya_ 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHhc
Confidence 000111222222222 235567999999999999999999999999999887543
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-49 Score=378.50 Aligned_cols=251 Identities=22% Similarity=0.261 Sum_probs=198.8
Q ss_pred CcccccccCCCCCCcEEEEEEEc-C-CcEEEEEEccCCCC--CChhHHHHHHHHhccC---CCCcceeeeeeeee-----
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-N-NRLVAIKRFSRQSW--PDPHQFVTEAAGLGNV---RHKRLVNLIGCCAE----- 129 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~-~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~----- 129 (497)
++|.++++||+|+||+||+|++. + ++.||||+++.... .....+.+|+.+|+.+ +||||++++++|..
T Consensus 7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~ 86 (305)
T d1blxa_ 7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 86 (305)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccccc
Confidence 46789999999999999999974 4 67899999865322 2244677888887766 79999999999853
Q ss_pred CCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 130 GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 130 ~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
....+++|||+.++++.... ......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 87 ~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~-ivHrDiKp~NILi~~~~~~kl~dfg~~~ 164 (305)
T d1blxa_ 87 ETKLTLVFEHVDQDLTTYLD-KVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLAR 164 (305)
T ss_dssp EEEEEEEEECCSCBHHHHHH-HSCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred CceEEEEEEeccCCchhhhh-hccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecCCCccEEEEcCCCCeeecchhhhh
Confidence 24689999999887665443 334678999999999999999999999999 9999999999999999999999999988
Q ss_pred ccCCC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc---------------
Q 010932 210 NSRDG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL--------------- 271 (497)
Q Consensus 210 ~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~--------------- 271 (497)
..... ....||+.|+|||++.+..++.++|||||||++|||+||+.||..............
T Consensus 165 ~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 244 (305)
T d1blxa_ 165 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 244 (305)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred hhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhccccccc
Confidence 65433 456789999999999999999999999999999999999999875432211110000
Q ss_pred ---ccc---ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 272 ---LLM---DSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 272 ---~~~---~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
... .......++...++.+.+|+.+||+.||++|||+.++++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H 293 (305)
T d1blxa_ 245 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 293 (305)
T ss_dssp SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred chhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 000 0000112233456789999999999999999999999986
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-47 Score=373.69 Aligned_cols=248 Identities=18% Similarity=0.215 Sum_probs=194.4
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeCC------c
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEGD------E 132 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~ 132 (497)
+.|.+++.||+|+||+||+|.++ +|+.||||+++...... .+.+.+|+++|+.++|||||+++++|...+ +
T Consensus 18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~ 97 (346)
T d1cm8a_ 18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 97 (346)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred CcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccce
Confidence 46788999999999999999975 59999999997643322 457899999999999999999999997654 5
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
.++||||+ +.+|..++. ...+++..++.++.||+.||.|||++| |+||||||+|||++.++.+||+|||+++...
T Consensus 98 ~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~-IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~ 172 (346)
T d1cm8a_ 98 FYLVMPFM-GTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQAD 172 (346)
T ss_dssp CEEEEECC-SEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEecc-cccHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhCC-CcccccCcchhhcccccccccccccceeccC
Confidence 79999999 677877764 357999999999999999999999999 9999999999999999999999999998765
Q ss_pred CC-CccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccc---------------------
Q 010932 213 DG-KSYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKN--------------------- 269 (497)
Q Consensus 213 ~~-~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~--------------------- 269 (497)
.. ....||+.|+|||++.+. .++.++|||||||++|+|++|+.||............
T Consensus 173 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (346)
T d1cm8a_ 173 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 252 (346)
T ss_dssp SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred CccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhh
Confidence 44 456789999999999864 5689999999999999999999988654211110000
Q ss_pred -ccccc---ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 270 -LLLLM---DSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 270 -~~~~~---~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..... ............++.+.+||.+||+.||++|||+.++|+|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H 301 (346)
T d1cm8a_ 253 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 301 (346)
T ss_dssp HHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000 0000111223456789999999999999999999999986
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-47 Score=368.35 Aligned_cols=251 Identities=19% Similarity=0.181 Sum_probs=195.3
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCC--CChhHHHHHHHHhccCCCCcceeeeeeeee--------
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSW--PDPHQFVTEAAGLGNVRHKRLVNLIGCCAE-------- 129 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-------- 129 (497)
.+.|.++++||+|+||+||+|++. +|+.||||++..... ...+++.+|+.+|++++||||+++++++..
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~ 88 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 88 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence 467889999999999999999975 699999999865432 235679999999999999999999998855
Q ss_pred CCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 130 GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 130 ~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
..+.++||||+.++.+..... ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 89 ~~~~~iv~e~~~~~~~~~~~~--~~~~~~~~~~~~i~~qil~~l~~lH~~~-ivHrDlKp~NILl~~~~~~kl~dfg~~~ 165 (318)
T d3blha1 89 KGSIYLVFDFCEHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLAR 165 (318)
T ss_dssp --CEEEEEECCCEEHHHHHTC--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred CceEEEEEeccCCCccchhhh--cccccccHHHHHHHHHHHHHHHHhccCC-EEecCcCchheeecCCCcEEeeecceee
Confidence 346899999998776665543 3678999999999999999999999999 9999999999999999999999999997
Q ss_pred ccCC--------CCccccCCCCCCccccccC-CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccc--ccccc--
Q 010932 210 NSRD--------GKSYSTNLAYTPPEFLRTG-RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL--LLMDS-- 276 (497)
Q Consensus 210 ~~~~--------~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~--~~~~~-- 276 (497)
.... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.............. .....
T Consensus 166 ~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 245 (318)
T d3blha1 166 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 245 (318)
T ss_dssp ECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred ecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhh
Confidence 5432 1235689999999999865 689999999999999999999988865322211110000 00000
Q ss_pred ---------------ccCCCCC-------HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 277 ---------------SLEGQYA-------NEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 277 ---------------~~~~~~~-------~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
......+ ...++.+.+||.+||+.||++|||++++++|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H 305 (318)
T d3blha1 246 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305 (318)
T ss_dssp STTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence 0000000 0124567899999999999999999999986
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.5e-47 Score=361.72 Aligned_cols=250 Identities=18% Similarity=0.200 Sum_probs=203.2
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC--ChhHHHHHHHHhccCCCCcceeeeeeeeeCCceEEEEE
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQ 138 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 138 (497)
+.|+++++||+|+||+||+|++. +|+.||||+++..... ...++.+|+.+|+.++||||+++++++.+....++|++
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~ 81 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence 46889999999999999999975 5899999999754332 25689999999999999999999999999999999999
Q ss_pred cCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCCCC---
Q 010932 139 YMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--- 215 (497)
Q Consensus 139 ~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 215 (497)
++.+++|..++.. .+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||.++......
T Consensus 82 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~q~~~aL~~lH~~~-IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~ 158 (292)
T d1unla_ 82 FCDQDLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158 (292)
T ss_dssp CCSEEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCC
T ss_pred ecccccccccccc--ccccchhHHHHHHHHHHHHHHHhhcCC-EeeecccCcccccccCCceeeeecchhhcccCCCccc
Confidence 9999998887754 678899999999999999999999999 9999999999999999999999999998654432
Q ss_pred -ccccCCCCCCccccccCC-CCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccc---------------cccc----
Q 010932 216 -SYSTNLAYTPPEFLRTGR-VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNL---------------LLLM---- 274 (497)
Q Consensus 216 -~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~---------------~~~~---- 274 (497)
...+++.|+|||.+.... ++.++|||||||++|||++|+.||............+ ....
T Consensus 159 ~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T d1unla_ 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238 (292)
T ss_dssp CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred eeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccc
Confidence 345678899999988665 6899999999999999999999864321111000000 0000
Q ss_pred -----ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 275 -----DSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 275 -----~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
............++.+.+|+.+||+.||++|||++|+|+|
T Consensus 239 ~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H 283 (292)
T d1unla_ 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0001112234456789999999999999999999999985
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-47 Score=371.29 Aligned_cols=247 Identities=22% Similarity=0.212 Sum_probs=192.6
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceeeeeeeeeC------CceEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG------DERLL 135 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~l 135 (497)
.|..++.||+|+||+||+|++. +|+.||||++..... .+.+|+++|++++|||||+++++|... .+.+|
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l 96 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence 4567778899999999999986 599999999975432 244799999999999999999998543 34789
Q ss_pred EEEcCCCCChhhhhh-cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC-CeeEcccCCccccCC
Q 010932 136 VAQYMPNDTLSKHLF-HWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG-DPRLSSFGLMKNSRD 213 (497)
Q Consensus 136 v~e~~~~~~L~~~l~-~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~ 213 (497)
||||++++.+..+.. ......+++..++.++.||+.||.|||++| |+||||||+|||++.++ .+||+|||+++....
T Consensus 97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~-IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~ 175 (350)
T d1q5ka_ 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175 (350)
T ss_dssp EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTTCCEEECCCTTCEECCT
T ss_pred EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcC-CcccCCCcceEEEecCCCceeEecccchhhccC
Confidence 999998664443332 123568999999999999999999999999 99999999999999775 899999999986543
Q ss_pred C---CccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcc---------------------
Q 010932 214 G---KSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGK--------------------- 268 (497)
Q Consensus 214 ~---~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~--------------------- 268 (497)
. .+..||+.|+|||.+.+ ..++.++|||||||++|||++|+.||...........
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~ 255 (350)
T d1q5ka_ 176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255 (350)
T ss_dssp TSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---
T ss_pred CcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchh
Confidence 3 35678999999998875 4689999999999999999999998865432111100
Q ss_pred --ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 269 --NLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 269 --~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
..................++++.+|+.+||+.||++|||+.|+|+|
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 303 (350)
T d1q5ka_ 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303 (350)
T ss_dssp CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000000001111223457789999999999999999999999986
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-47 Score=371.54 Aligned_cols=248 Identities=21% Similarity=0.231 Sum_probs=192.7
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCC-ChhHHHHHHHHhccCCCCcceeeeeeeeeCC----ceEEE
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGD----ERLLV 136 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~lv 136 (497)
.|.+++.||+|+||+||+|.++ +|+.||||++...... ..+.+.+|+.+|++++||||+++++++.... ..+++
T Consensus 9 rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l 88 (345)
T d1pmea_ 9 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYL 88 (345)
T ss_dssp TEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred CeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEE
Confidence 5789999999999999999975 6999999999754322 2457899999999999999999999987643 23455
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC---
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD--- 213 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 213 (497)
++|+.+|+|.+++.. ..+++..++.++.||+.||.|||++| ||||||||+|||++.++.+||+|||+++....
T Consensus 89 ~~~~~~g~L~~~l~~---~~l~~~~i~~i~~qil~al~yLH~~~-iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~ 164 (345)
T d1pmea_ 89 VTHLMGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 164 (345)
T ss_dssp EEECCCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGGGC
T ss_pred EEeecCCchhhhhhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCcceEEECCCCCEEEcccCceeeccCCCc
Confidence 566779999999964 47999999999999999999999999 99999999999999999999999999875432
Q ss_pred ----CCccccCCCCCCcccccc-CCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccc---------------
Q 010932 214 ----GKSYSTNLAYTPPEFLRT-GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLL--------------- 273 (497)
Q Consensus 214 ----~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~--------------- 273 (497)
.....||+.|+|||++.. ..++.++||||+||++|+|++|+.||................
T Consensus 165 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T d1pmea_ 165 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 244 (345)
T ss_dssp BCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHH
T ss_pred cceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhh
Confidence 234568999999999854 567889999999999999999999886542211111000000
Q ss_pred -----cccccCCC-----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 274 -----MDSSLEGQ-----YANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 274 -----~~~~~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
........ ..+..+.++.+|+.+||+.||.+|||+.++|++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h 295 (345)
T d1pmea_ 245 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 295 (345)
T ss_dssp HHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00000000 112345679999999999999999999999986
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=1.3e-46 Score=365.85 Aligned_cols=245 Identities=18% Similarity=0.181 Sum_probs=196.9
Q ss_pred CCcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCC-CCcceeeeeeeeeC--CceEEE
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR-HKRLVNLIGCCAEG--DERLLV 136 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~--~~~~lv 136 (497)
.++|.+++.||+|+||+||+|++. +|+.||||+++.. ..+++.+|+.+|+.++ ||||+++++++... ...++|
T Consensus 34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v 110 (328)
T d3bqca1 34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 110 (328)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEE
T ss_pred CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEE
Confidence 356889999999999999999985 5999999999753 3578999999999995 99999999999754 568999
Q ss_pred EEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCC-CeeEcccCCccccCCC-
Q 010932 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG-DPRLSSFGLMKNSRDG- 214 (497)
Q Consensus 137 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~~- 214 (497)
|||+.+++|.... ..+++..+..++.||+.||.|||++| |+||||||+|||++.++ .+||+|||+++.....
T Consensus 111 ~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~g-IvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~ 184 (328)
T d3bqca1 111 FEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 184 (328)
T ss_dssp EECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCGGGCEECCTTC
T ss_pred EeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcc-cccccccccceEEcCCCCeeeecccccceeccCCC
Confidence 9999999997764 46999999999999999999999999 99999999999998655 5899999999865433
Q ss_pred --CccccCCCCCCccccccCC-CCcccceeehhhhHHHHhhCCCCCCchhhHHHh------------------cc-----
Q 010932 215 --KSYSTNLAYTPPEFLRTGR-VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIR------------------GK----- 268 (497)
Q Consensus 215 --~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~------------------~~----- 268 (497)
....+|+.|+|||.+.+.. ++.++|||||||++|+|++|+.||......... ..
T Consensus 185 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 264 (328)
T d3bqca1 185 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 264 (328)
T ss_dssp CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCC
T ss_pred cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccC
Confidence 4557899999999988654 799999999999999999999987543211000 00
Q ss_pred -cccccc--------ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 269 -NLLLLM--------DSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 269 -~~~~~~--------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
...... ............++++.+||.+||+.||++|||++++|+|
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H 319 (328)
T d3bqca1 265 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 319 (328)
T ss_dssp GGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000000 0001111223456789999999999999999999999985
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-47 Score=368.28 Aligned_cols=249 Identities=20% Similarity=0.246 Sum_probs=203.3
Q ss_pred CCcccccccCCCCCCcEEEEEEEc----CCcEEEEEEccCCC----CCChhHHHHHHHHhccCCC-CcceeeeeeeeeCC
Q 010932 61 FSSELIVSESGDKAPNVVYRGRLK----NNRLVAIKRFSRQS----WPDPHQFVTEAAGLGNVRH-KRLVNLIGCCAEGD 131 (497)
Q Consensus 61 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~ 131 (497)
.++|.+++.||+|+||+||+|... +|+.||||+++... ....+.+.+|+++|++++| |||+++++++.+..
T Consensus 23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~ 102 (322)
T d1vzoa_ 23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 102 (322)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC
Confidence 356889999999999999999852 38899999986432 2345678999999999976 89999999999999
Q ss_pred ceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCcccc
Q 010932 132 ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS 211 (497)
Q Consensus 132 ~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 211 (497)
..++||||+.+|+|.+++.. .+.+++..+..++.||+.||.|+|+++ ++||||||+|||++.+|.+||+|||+++..
T Consensus 103 ~~~~v~e~~~~~~L~~~i~~--~~~~~e~~~~~~~~Qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~vkL~DFG~a~~~ 179 (322)
T d1vzoa_ 103 KLHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEF 179 (322)
T ss_dssp EEEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred ceeeeeecccccHHHHHHHh--cccccHHHHHHHHHHHHHHHHHhhcCC-EEeccCCccceeecCCCCEEEeeccchhhh
Confidence 99999999999999999976 567889999999999999999999999 999999999999999999999999999754
Q ss_pred CCC-----CccccCCCCCCccccccC--CCCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccccccccCCCCCH
Q 010932 212 RDG-----KSYSTNLAYTPPEFLRTG--RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYAN 284 (497)
Q Consensus 212 ~~~-----~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (497)
... ....|++.|+|||.+.+. .++.++|||||||+||+|+||+.||................. .....++.
T Consensus 180 ~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~--~~~~~~~~ 257 (322)
T d1vzoa_ 180 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL--KSEPPYPQ 257 (322)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH--HCCCCCCT
T ss_pred cccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcc--cCCCCCcc
Confidence 332 345789999999999764 468899999999999999999999865422111111001111 11234456
Q ss_pred HHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 010932 285 EDATQLVELASKCLQYEAKDRP-----DVKFLLSA 314 (497)
Q Consensus 285 ~~~~~l~~li~~cl~~dp~~Rp-----s~~~ll~~ 314 (497)
..++++.+|+.+||+.||++|| |++|+++|
T Consensus 258 ~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H 292 (322)
T d1vzoa_ 258 EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 292 (322)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred cCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcC
Confidence 6788999999999999999999 48899875
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.5e-46 Score=358.96 Aligned_cols=251 Identities=17% Similarity=0.146 Sum_probs=195.8
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcceee-eeeeeeCCceEEEEEcC
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNL-IGCCAEGDERLLVAQYM 140 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~-~~~~~~~~~~~lv~e~~ 140 (497)
.|.+++.||+|+||+||+|++. +|+.||||++.... ..+++..|+++++.++|+|++.. .+++.+.+..++||||+
T Consensus 8 rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~ 85 (299)
T d1ckia_ 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 85 (299)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred EEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc
Confidence 4788899999999999999975 58999999987643 23468899999999987765554 55567778889999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeC---CCCCeeEcccCCccccCCC---
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD---EDGDPRLSSFGLMKNSRDG--- 214 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfgla~~~~~~--- 214 (497)
+++|...+.. ....+++..+..++.|++.||.|||+++ |+||||||+|||++ .+..+||+|||+|+.....
T Consensus 86 -~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~ 162 (299)
T d1ckia_ 86 -GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 162 (299)
T ss_dssp -CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTC
T ss_pred -CCchhhhhhh-ccCCCcHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHhhccccccCCCceeeeeccCcceeccccccc
Confidence 5666666544 3568999999999999999999999999 99999999999986 4567999999999864322
Q ss_pred --------CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccccccccccc---CCCCC
Q 010932 215 --------KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSL---EGQYA 283 (497)
Q Consensus 215 --------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 283 (497)
....||+.|||||++.+..++.++|||||||++|||+||+.||........... ......... .....
T Consensus 163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 241 (299)
T d1ckia_ 163 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK-YERISEKKMSTPIEVLC 241 (299)
T ss_dssp CBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC--------HHHHHHHHHHSCHHHHT
T ss_pred cceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHH-HHHhhcccCCCChhHhc
Confidence 245789999999999998999999999999999999999998865322211110 000000000 01112
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhh
Q 010932 284 NEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQ 319 (497)
Q Consensus 284 ~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~ 319 (497)
..+++++.+|+.+||+.||++||++.++.+.|+.+.
T Consensus 242 ~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~ 277 (299)
T d1ckia_ 242 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 277 (299)
T ss_dssp TTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 345678999999999999999999999988887664
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.8e-46 Score=364.21 Aligned_cols=247 Identities=21% Similarity=0.226 Sum_probs=190.0
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeee------CCc
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAE------GDE 132 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~ 132 (497)
..|++++.||+|+||+||+|++. +|+.||||++....... ..++.+|+.+|++++|||||++++++.. ..+
T Consensus 17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~ 96 (355)
T d2b1pa1 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 96 (355)
T ss_dssp TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence 46889999999999999999986 59999999997654322 3468899999999999999999999964 367
Q ss_pred eEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccC
Q 010932 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR 212 (497)
Q Consensus 133 ~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 212 (497)
.|+||||+.++.+ ..+ ...+++..++.++.||+.||.|||++| |+||||||+|||++.++.+|++|||+++...
T Consensus 97 ~~iv~Ey~~~~l~-~~~----~~~~~~~~i~~~~~qil~gl~~LH~~g-iiHrDlKP~Nil~~~~~~~kl~df~~~~~~~ 170 (355)
T d2b1pa1 97 VYLVMELMDANLC-QVI----QMELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_dssp EEEEEECCSEEHH-HHH----TSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred eEEEEeccchHHH-Hhh----hcCCCHHHHHHHHHHHHHHHHHhhhcc-cccccCCccccccccccceeeechhhhhccc
Confidence 8999999976644 444 346899999999999999999999999 9999999999999999999999999987654
Q ss_pred CC---CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHhcccc-------------------
Q 010932 213 DG---KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNL------------------- 270 (497)
Q Consensus 213 ~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~------------------- 270 (497)
.. ....+|+.|+|||++.+..++.++||||+||++|+|++|+.||.............
T Consensus 171 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 250 (355)
T d2b1pa1 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250 (355)
T ss_dssp ----------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHH
T ss_pred cccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHH
Confidence 43 34578999999999999999999999999999999999998886442111100000
Q ss_pred --------------ccccccccCC---CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 271 --------------LLLMDSSLEG---QYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 271 --------------~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.......... ......+.++.+|+.+||+.||++|||++++|+|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H 311 (355)
T d2b1pa1 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311 (355)
T ss_dssp HHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000000000 0123457789999999999999999999999986
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=6.6e-46 Score=354.29 Aligned_cols=254 Identities=16% Similarity=0.138 Sum_probs=203.0
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCCC-CcceeeeeeeeeCCceEEEEEcC
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRH-KRLVNLIGCCAEGDERLLVAQYM 140 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~ 140 (497)
.|.+++.||+|+||+||+|++. +|+.||||++.... ....+.+|++.++.++| +||+.+++++..+...++||||+
T Consensus 6 ~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~ 83 (293)
T d1csna_ 6 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 83 (293)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence 4678899999999999999976 58999999986543 33468889999999965 89999999999999999999998
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCC-----CCCeeEcccCCccccCC--
Q 010932 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE-----DGDPRLSSFGLMKNSRD-- 213 (497)
Q Consensus 141 ~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~-----~~~~kl~Dfgla~~~~~-- 213 (497)
+++|.+++.. ....+++..+..++.|++.||.|||++| |+||||||+|||++. ++.+||+|||+++....
T Consensus 84 -~~~l~~~~~~-~~~~~~~~~~~~i~~q~~~~l~~lH~~g-iiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~ 160 (293)
T d1csna_ 84 -GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 160 (293)
T ss_dssp -CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred -CCCHHHHHHh-hccchhhHHHHHHHHHHHHHHHHHHHCC-ceeccCCccceeecCcccccCCceEEcccceeEEcccCc
Confidence 7899998865 3567999999999999999999999999 999999999999974 57899999999985432
Q ss_pred ---------CCccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHh--ccccccccccccCCCC
Q 010932 214 ---------GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIR--GKNLLLLMDSSLEGQY 282 (497)
Q Consensus 214 ---------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 282 (497)
.....||+.|||||++.+..++.++|||||||++|||+||+.||......... ...+............
T Consensus 161 ~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (293)
T d1csna_ 161 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLREL 240 (293)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHH
T ss_pred cccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHh
Confidence 22457899999999999999999999999999999999999988643111000 0000000000000111
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhhhhhcc
Q 010932 283 ANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321 (497)
Q Consensus 283 ~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~l~~~~~~ 321 (497)
...+|+++.+++..|++.+|++||+++.+.+.|+.+...
T Consensus 241 ~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~ 279 (293)
T d1csna_ 241 CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 279 (293)
T ss_dssp TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHH
Confidence 233567799999999999999999999998888776543
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-46 Score=364.09 Aligned_cols=249 Identities=19% Similarity=0.199 Sum_probs=194.8
Q ss_pred CcccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCC--hhHHHHHHHHhccCCCCcceeeeeeeeeC-----Cce
Q 010932 62 SSELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCAEG-----DER 133 (497)
Q Consensus 62 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~ 133 (497)
+.|.+++.||+|+||+||+|++. +|+.||||+++...... .+++.+|+++|++++|||||++++++... ...
T Consensus 18 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~ 97 (348)
T d2gfsa1 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 97 (348)
T ss_dssp TTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCC
T ss_pred CCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCce
Confidence 35789999999999999999975 59999999998654322 35789999999999999999999998643 334
Q ss_pred EEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCCccccCC
Q 010932 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD 213 (497)
Q Consensus 134 ~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 213 (497)
+++++|+.+|+|.+++. .+.+++..+..++.||+.||.|||++| |+||||||+|||++.+|.+|++|||++.....
T Consensus 98 ~~i~~~~~gg~L~~~~~---~~~l~e~~~~~i~~qil~aL~~LH~~g-iiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~ 173 (348)
T d2gfsa1 98 VYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173 (348)
T ss_dssp CEEEEECCSEEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCC----CCTG
T ss_pred EEEEEeecCCchhhhcc---cccccHHHHHHHHHHHHHHHHHHHhCC-CcccccCCccccccccccccccccchhcccCc
Confidence 67777888999999985 457999999999999999999999999 99999999999999999999999999876543
Q ss_pred C-CccccCCCCCCccccccCC-CCcccceeehhhhHHHHhhCCCCCCchhhHHHhccccccc------------------
Q 010932 214 G-KSYSTNLAYTPPEFLRTGR-VIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLL------------------ 273 (497)
Q Consensus 214 ~-~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~------------------ 273 (497)
. ....||+.|+|||.+.+.. ++.++|||||||++|+|++|+.||.+..............
T Consensus 174 ~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 253 (348)
T d2gfsa1 174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 253 (348)
T ss_dssp GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHH
T ss_pred ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhh
Confidence 3 4567889999999877654 6889999999999999999999886543221111000000
Q ss_pred -cccc-cCCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 274 -MDSS-LEGQY-----ANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 274 -~~~~-~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
.... ..... ....++.+.+||.+||+.||++|||+.++|+|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H 301 (348)
T d2gfsa1 254 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301 (348)
T ss_dssp HHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence 0000 00000 12346779999999999999999999999985
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.5e-40 Score=327.60 Aligned_cols=250 Identities=15% Similarity=0.174 Sum_probs=190.2
Q ss_pred cccccccCCCCCCcEEEEEEEc-CCcEEEEEEccCCCCCChhHHHHHHHHhccCC-----------CCcceeeeeeeeeC
Q 010932 63 SELIVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR-----------HKRLVNLIGCCAEG 130 (497)
Q Consensus 63 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~~~~~~~~~ 130 (497)
.|.++++||+|+||+||+|+.. +|+.||||+++.... ..+.+.+|+.+|+.++ |+||+++++++...
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~-~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~ 92 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV-YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 92 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecccc-chHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence 4899999999999999999975 599999999975421 2456788999988875 57899999888553
Q ss_pred --CceEEEEEcCCCC-ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCcccccCCCcceEeCCCCC------e
Q 010932 131 --DERLLVAQYMPND-TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNS-QNRKLYHDLNAYRVLFDEDGD------P 200 (497)
Q Consensus 131 --~~~~lv~e~~~~~-~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~-~~~iiH~Dlkp~Nill~~~~~------~ 200 (497)
...+++++++..+ +............+++..+..++.||+.||.|||+ .| |+||||||+|||++.++. +
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~-IvHrDlKp~NIll~~~~~~~~~~~~ 171 (362)
T d1q8ya_ 93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLIQI 171 (362)
T ss_dssp ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEEEE
T ss_pred cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcC-cccccCChhHeeeeccCccccccee
Confidence 4556666665443 33333444456789999999999999999999998 77 999999999999986654 9
Q ss_pred eEcccCCccccCCC-CccccCCCCCCccccccCCCCcccceeehhhhHHHHhhCCCCCCchhhHHHh-------------
Q 010932 201 RLSSFGLMKNSRDG-KSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIR------------- 266 (497)
Q Consensus 201 kl~Dfgla~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~------------- 266 (497)
+++|||.+...... ....||+.|+|||++.+..++.++||||+||++++|++|+.||.........
T Consensus 172 kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~l 251 (362)
T d1q8ya_ 172 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL 251 (362)
T ss_dssp EECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHH
T ss_pred eEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHh
Confidence 99999999854433 4567899999999999999999999999999999999999987533110000
Q ss_pred ---------c-cccccccc---------c----------ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 010932 267 ---------G-KNLLLLMD---------S----------SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSA 314 (497)
Q Consensus 267 ---------~-~~~~~~~~---------~----------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ll~~ 314 (497)
. .......+ . ......+...++.+.+|+.+||+.||.+|||++++|+|
T Consensus 252 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H 328 (362)
T d1q8ya_ 252 GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 328 (362)
T ss_dssp CSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred CCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 00000000 0 00122345678899999999999999999999999975
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.90 E-value=1.1e-24 Score=193.05 Aligned_cols=162 Identities=13% Similarity=0.080 Sum_probs=119.8
Q ss_pred ccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCC-----C-------------hhHHHHHHHHhccCCCCcceeeeeee
Q 010932 66 IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWP-----D-------------PHQFVTEAAGLGNVRHKRLVNLIGCC 127 (497)
Q Consensus 66 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-----~-------------~~~~~~e~~~l~~l~h~niv~~~~~~ 127 (497)
+-++||+|+||+||+|...+|+.||||+++..... . ...+.+|+..+.++.|++++..+++.
T Consensus 4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~ 83 (191)
T d1zara2 4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE 83 (191)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence 45678999999999999888999999997642111 0 12345688899999999999887653
Q ss_pred eeCCceEEEEEcCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCCcceEeCCCCCeeEcccCC
Q 010932 128 AEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGL 207 (497)
Q Consensus 128 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 207 (497)
. .+++|||+++..+.. ++......++.|++.+|.|||++| ++||||||+|||+++++ ++|+|||+
T Consensus 84 ~----~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~g-iiHrDiKP~NILv~~~~-~~liDFG~ 148 (191)
T d1zara2 84 G----NAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLVSEEG-IWIIDFPQ 148 (191)
T ss_dssp T----TEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEETTE-EEECCCTT
T ss_pred C----CEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhCC-EEEccCChhheeeeCCC-EEEEECCC
Confidence 2 389999998765543 334446789999999999999999 99999999999999655 89999999
Q ss_pred ccccCCCCccccCCCCCC------ccccccCCCCcccceeehhhhH
Q 010932 208 MKNSRDGKSYSTNLAYTP------PEFLRTGRVIPESVIYSYGTVL 247 (497)
Q Consensus 208 a~~~~~~~~~~gt~~y~a------PE~~~~~~~~~~~Dv~slG~~l 247 (497)
|+........ .|.. .+.+ ...|+.++|+||..--+
T Consensus 149 a~~~~~~~~~----~~l~rd~~~~~~~f-~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 149 SVEVGEEGWR----EILERDVRNIITYF-SRTYRTEKDINSAIDRI 189 (191)
T ss_dssp CEETTSTTHH----HHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHH
T ss_pred cccCCCCCcH----HHHHHHHHHHHHHH-cCCCCCcccHHHHHHHH
Confidence 9765433211 1111 1122 35678899999976444
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=7.8e-21 Score=153.73 Aligned_cols=107 Identities=19% Similarity=0.294 Sum_probs=103.3
Q ss_pred HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q 010932 388 DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALA 467 (497)
Q Consensus 388 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 467 (497)
.+..++.+|+.++..|+|++|+..|+++|+ .+|+++.+|+++|.+|..+|++++|+.+|+++++++|+++.+|+++|.+
T Consensus 2 ~~~~l~~~g~~~~~~g~~~eAi~~~~~al~-~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 80 (117)
T d1elwa_ 2 QVNELKEKGNKALSVGNIDDALQCYSEAIK-LDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 80 (117)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-cCCcchhhhhcccccccccccccccchhhhhHHHhccchhhHHHHHHHH
Confidence 456788999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 468 LNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 468 ~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
+..+|++++|+.+|++|++++|+++.+|
T Consensus 81 ~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 108 (117)
T d1elwa_ 81 LEFLNRFEEAKRTYEEGLKHEANNPQLK 108 (117)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999988765
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.81 E-value=4.5e-20 Score=164.05 Aligned_cols=107 Identities=19% Similarity=0.242 Sum_probs=103.2
Q ss_pred HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q 010932 388 DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALA 467 (497)
Q Consensus 388 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 467 (497)
++..+.+.|+.+++.|+|++|+..|++||+ ++|+++.+|+++|.||.++|+|++|+.+|++||+++|+++.+|+++|.+
T Consensus 3 ~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~-~~p~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~~~lg~~ 81 (201)
T d2c2la1 3 SAQELKEQGNRLFVGRKYPEAAACYGRAIT-RNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (201)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCCCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHHHHHHHH
Confidence 467889999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 468 LNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 468 ~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
|..+|+|++|+.+|++|++++|+....|
T Consensus 82 ~~~l~~~~~A~~~~~~al~l~p~~~~~~ 109 (201)
T d2c2la1 82 QLEMESYDEAIANLQRAYSLAKEQRLNF 109 (201)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHCCCHHHHHHHHHHHHHhCcccHHHH
Confidence 9999999999999999999999877665
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=1.2e-19 Score=155.33 Aligned_cols=110 Identities=22% Similarity=0.298 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHH
Q 010932 384 QQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYM 463 (497)
Q Consensus 384 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 463 (497)
..++.+..+..+|+.+++.|+|++|+.+|++||+ ++|+++.+|+++|.|+..+|++++|+.+|++||+++|+++.+|++
T Consensus 5 ~~l~~a~~l~~~gn~~~~~~~y~~A~~~~~~al~-~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~~~~a~~~ 83 (159)
T d1a17a_ 5 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIE-LNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYR 83 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHhhhccc-cchhhhhhhhhhHHHHHhccccchHHHHHHHHHHHcccchHHHHH
Confidence 3457788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCChHHHHHHHHHhhcCccccccC
Q 010932 464 QALALNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 464 ~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
+|.++..+|++++|+.+|++|++++|.+..+
T Consensus 84 ~g~~~~~~g~~~eA~~~~~~a~~~~p~~~~~ 114 (159)
T d1a17a_ 84 RAASNMALGKFRAALRDYETVVKVKPHDKDA 114 (159)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCCHHH
Confidence 9999999999999999999999999987654
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=6.2e-19 Score=155.57 Aligned_cols=132 Identities=14% Similarity=0.165 Sum_probs=121.2
Q ss_pred HHHHhccccccccchhhhhhHHHHHH-HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhc
Q 010932 361 ILLKTGYKDEEGAENELSFQEWTQQV-QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQ 439 (497)
Q Consensus 361 ~~~~~g~~~~~~~~~e~a~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~ 439 (497)
.+.+.|..+...++++.|++.|++.. .++..++++|.+++.+|+|++|+++|++||+ ++|+++.+|+++|.++.++|+
T Consensus 7 ~l~~~g~~~~~~~d~~~Al~~~~~i~~~~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~-ldp~~~~a~~~~g~~~~~~g~ 85 (192)
T d1hh8a_ 7 SLWNEGVLAADKKDWKGALDAFSAVQDPHSRICFNIGCMYTILKNMTEAEKAFTRSIN-RDKHLAVAYFQRGMLYYQTEK 85 (192)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTSSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCchhHHHHHHHHHH-HhhhhhhhHHHHHHHHHhhcc
Confidence 45577999999999999999998755 5678899999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCC----------------hHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccccc
Q 010932 440 AELALRDAMQAQVCLPEW----------------PTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQN 493 (497)
Q Consensus 440 ~~~A~~~~~~al~l~p~~----------------~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~ 493 (497)
|++|+.+|++|+...|.+ .++++++|.++..+|++++|++.|++|+++.|+..+
T Consensus 86 ~~~A~~~~~kAl~~~~~n~~~~~~~~~~~~~~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~~~~~~~~ 155 (192)
T d1hh8a_ 86 YDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRH 155 (192)
T ss_dssp HHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGG
T ss_pred HHHHHHHHHHHHHhCccCchHHHHHhhhhcccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcch
Confidence 999999999999876653 488999999999999999999999999999887543
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=5.2e-19 Score=168.91 Aligned_cols=140 Identities=7% Similarity=0.046 Sum_probs=134.5
Q ss_pred hHHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcc-cHHHHHHHHHHHhhcCCCCcHHHHHHH
Q 010932 356 TAVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDK-DFKNAIEYYSKLVSMMSVPSGTVFVRR 430 (497)
Q Consensus 356 ~~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~-~~~~Ai~~~~~ai~~~~p~~~~~~~~~ 430 (497)
+.+.+++...|..+.+.+.+++|++.++++| +++.+|+++|.++...| ++++|+..|+++|+ ++|+++.+|+++
T Consensus 40 p~~~~a~~~~~~~~~~~e~~~~Al~~~~~ai~lnP~~~~a~~~r~~~l~~l~~~~~eal~~~~~al~-~~p~~~~a~~~~ 118 (315)
T d2h6fa1 40 DKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIE-EQPKNYQVWHHR 118 (315)
T ss_dssp HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH-HCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHCCCChHHHHHHHHHHHHhCcCHHHHHHHHHHHHH-HHHhhhhHHHHH
Confidence 5788999999999999999999999999999 78999999999999986 59999999999999 999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCCC
Q 010932 431 ALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSWR 496 (497)
Q Consensus 431 g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~~ 496 (497)
|.++.++|++++|+..+++|++++|++..+|+++|.++..+|++++|+++|++|++++|.+..+|+
T Consensus 119 ~~~~~~l~~~~eAl~~~~kal~~dp~n~~a~~~~~~~~~~~~~~~~Al~~~~~al~~~p~n~~a~~ 184 (315)
T d2h6fa1 119 RVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWN 184 (315)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHH
T ss_pred hHHHHhhccHHHHHHHHhhhhhhhhcchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHCCccHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998885
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.75 E-value=2.9e-18 Score=145.38 Aligned_cols=111 Identities=18% Similarity=0.203 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc----------------HHHHHHHHHHHHhhhcHHHHHHHH
Q 010932 384 QQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS----------------GTVFVRRALSYLMIEQAELALRDA 447 (497)
Q Consensus 384 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~----------------~~~~~~~g~~~~~~~~~~~A~~~~ 447 (497)
..++.+..+...|+.+|+.|+|.+|+..|++||+ .-+.. ..+|.|+|.||+++|+|++|+.+|
T Consensus 12 e~~~~a~~~~~~G~~~f~~~~y~~A~~~Y~~al~-~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Al~~~ 90 (153)
T d2fbna1 12 EKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALD-FFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHA 90 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-TTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-hCcchhhhhhHHHHHhhhhHHHHHHhhHHHHHHHhcccchhhhhh
Confidence 3557888999999999999999999999999998 54432 257899999999999999999999
Q ss_pred HHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 448 MQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 448 ~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
++||+++|++.++|+++|.+|..+|++++|+.+|++|++++|++..++
T Consensus 91 ~~al~~~p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~ 138 (153)
T d2fbna1 91 SKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIR 138 (153)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred hccccccchhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999999999999999999999987654
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.74 E-value=4.4e-18 Score=157.19 Aligned_cols=126 Identities=13% Similarity=-0.035 Sum_probs=115.5
Q ss_pred cccccccchhhhhhHHHHHH--------HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhh
Q 010932 367 YKDEEGAENELSFQEWTQQV--------QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIE 438 (497)
Q Consensus 367 ~~~~~~~~~e~a~~~~~~~~--------~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~ 438 (497)
.......+.+.++..+++.+ +.+..++.+|.++++.|+|++|+..|++||+ ++|+++.+|+++|.+|..+|
T Consensus 7 ~~~~~~~~~e~al~~~~e~l~~~~~~~~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~-l~p~~~~a~~~lg~~~~~~g 85 (259)
T d1xnfa_ 7 VPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALA-IRPDMPEVFNYLGIYLTQAG 85 (259)
T ss_dssp CCCCCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHTT
T ss_pred hcccccHHHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhc-cCCCCHHHHhhhchHHHHHH
Confidence 34455566677777777766 6788999999999999999999999999999 99999999999999999999
Q ss_pred cHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccccc
Q 010932 439 QAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQN 493 (497)
Q Consensus 439 ~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~ 493 (497)
++++|+..|++|++++|+++.+|+++|.+|..+|++++|++.|++|++++|++..
T Consensus 86 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 140 (259)
T d1xnfa_ 86 NFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPF 140 (259)
T ss_dssp CHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHhhhhhhHHHHHHhhhhhhHHHHHHHHHHHhhHHHHHHHHHHHHhhccccHH
Confidence 9999999999999999999999999999999999999999999999999987654
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=1.2e-17 Score=144.09 Aligned_cols=110 Identities=14% Similarity=0.098 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc---------------HHHHHHHHHHHHhhhcHHHHHHHHH
Q 010932 384 QQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS---------------GTVFVRRALSYLMIEQAELALRDAM 448 (497)
Q Consensus 384 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~---------------~~~~~~~g~~~~~~~~~~~A~~~~~ 448 (497)
+.++.+..+.++|+.+|..|+|++|+..|++||+ ..|.. ..+|.|+|.||+++|+|++|+..++
T Consensus 8 ek~~~a~~l~~~G~~~~~~~~~~~Ai~~y~~al~-~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~~~~~ 86 (170)
T d1p5qa1 8 EKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVS-WLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCN 86 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-HhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhcccccchhh
Confidence 3456788888899999999999999999999988 55543 3577889999999999999999999
Q ss_pred HHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccC
Q 010932 449 QAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 449 ~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
+||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..+
T Consensus 87 ~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~ 132 (170)
T d1p5qa1 87 KALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAA 132 (170)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHH
T ss_pred hhhhccccchhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHH
Confidence 9999999999999999999999999999999999999998876543
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.72 E-value=7.4e-18 Score=145.50 Aligned_cols=116 Identities=15% Similarity=0.186 Sum_probs=83.9
Q ss_pred hhHHHHHHHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhc---------------CCCCcHHHHHHHHHHHHhhhcHHHH
Q 010932 379 FQEWTQQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSM---------------MSVPSGTVFVRRALSYLMIEQAELA 443 (497)
Q Consensus 379 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~---------------~~p~~~~~~~~~g~~~~~~~~~~~A 443 (497)
+..+++.++.+..+...|+.++..|+|++|+..|++||+. ++|.+..+|.|+|.|+.++|+|++|
T Consensus 17 l~~~~~~~~~a~~~~~~~~~~~~~~~y~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A 96 (169)
T d1ihga1 17 LKDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGA 96 (169)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhhhhHHHHHhChhhHHHHHHHHHHHHhhcccchh
Confidence 3444445555666677777777777777777777777641 2455666777778888888888888
Q ss_pred HHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccC
Q 010932 444 LRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 444 ~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
+.+|++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..+
T Consensus 97 i~~~~~al~~~p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~ 147 (169)
T d1ihga1 97 VDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAI 147 (169)
T ss_dssp HHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred hhhhhhhhhhhhhhhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHH
Confidence 888888888888888888888888888888888888888888777776543
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.71 E-value=2.2e-17 Score=142.30 Aligned_cols=109 Identities=16% Similarity=0.155 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCC---------------cHHHHHHHHHHHHhhhcHHHHHHHHHH
Q 010932 385 QVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVP---------------SGTVFVRRALSYLMIEQAELALRDAMQ 449 (497)
Q Consensus 385 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~---------------~~~~~~~~g~~~~~~~~~~~A~~~~~~ 449 (497)
.++.+..+..+|+.+++.|+|++|+..|++||. .-+. ...+|.|+|.||+++|+|++|+.+|++
T Consensus 11 ~~~~a~~~~e~G~~~~~~~~~~~A~~~Y~~al~-~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Ai~~~~~ 89 (168)
T d1kt1a1 11 KLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVS-WLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDK 89 (168)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-HHHHhhccchhhhhhcchhHHHHHHhHHHHHHHhhhcccchhhhhh
Confidence 456788888999999999999999999999986 3222 135688899999999999999999999
Q ss_pred HHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccC
Q 010932 450 AQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 450 al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
|++++|++..+|+++|.+|..+|+|++|+++|++|++++|++..+
T Consensus 90 al~l~p~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~ 134 (168)
T d1kt1a1 90 ALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAA 134 (168)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHH
T ss_pred hhhcccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 999999999999999999999999999999999999999887654
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=1.3e-17 Score=136.64 Aligned_cols=103 Identities=19% Similarity=0.167 Sum_probs=96.1
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCCh-------H
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWP-------T 459 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~-------~ 459 (497)
+.+..+.++|+.++..|+|++|+.+|++||+ ++|+++.+|+++|.||.++|+|++|+.+|++||+++|++. .
T Consensus 2 ~~a~~~k~~G~~~~~~~~y~~Ai~~y~~al~-~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~~a~ 80 (128)
T d1elra_ 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKE-LDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (128)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCcccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 3577889999999999999999999999999 9999999999999999999999999999999999999885 4
Q ss_pred HHHHHHHHHHHCCChHHHHHHHHHhhcCccc
Q 010932 460 AFYMQALALNKLGMETDAQDMLNDGASFEAK 490 (497)
Q Consensus 460 a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~ 490 (497)
+|+++|.++..++++++|+++|++++.+++.
T Consensus 81 ~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 111 (128)
T d1elra_ 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (128)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Confidence 7778889999999999999999999987654
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.69 E-value=3.9e-17 Score=130.40 Aligned_cols=94 Identities=13% Similarity=0.014 Sum_probs=91.4
Q ss_pred HHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Q 010932 391 NTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNK 470 (497)
Q Consensus 391 ~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 470 (497)
.+++.|..+++.|++++|+..|+++|. .+|+++.+|+++|.++.++|++++|+..|++|++++|+++.+|+.+|.+|..
T Consensus 18 ~~~~~g~~~~~~g~~~~A~~~~~~al~-~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~la~~y~~ 96 (112)
T d1hxia_ 18 NPMEEGLSMLKLANLAEAALAFEAVCQ-KEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 96 (112)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHH-HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhhhcc-cccccchhhhhhhhhhhhhhhHHHhhcccccccccccccccchHHHHHHHHH
Confidence 457899999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhh
Q 010932 471 LGMETDAQDMLNDGA 485 (497)
Q Consensus 471 ~~~~~~A~~~~~~a~ 485 (497)
+|++++|+++|++++
T Consensus 97 ~g~~~~A~~~l~~~l 111 (112)
T d1hxia_ 97 EHNANAALASLRAWL 111 (112)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHh
Confidence 999999999999976
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=8.4e-17 Score=129.56 Aligned_cols=109 Identities=15% Similarity=0.074 Sum_probs=103.9
Q ss_pred HHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHH
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYL 435 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~ 435 (497)
+.+...|..++..|++++|+..|++++ .++..|+++|.+++..|+|++|+..|+++++ ++|+++.+|+++|.++.
T Consensus 4 ~~l~~~g~~~~~~g~~~eAi~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-~~p~~~~~~~~~g~~~~ 82 (117)
T d1elwa_ 4 NELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVD-LKPDWGKGYSRKAAALE 82 (117)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhcccccccccccccccchhhhhHHH-hccchhhHHHHHHHHHH
Confidence 457788999999999999999999999 6899999999999999999999999999999 99999999999999999
Q ss_pred hhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Q 010932 436 MIEQAELALRDAMQAQVCLPEWPTAFYMQALALN 469 (497)
Q Consensus 436 ~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 469 (497)
.+|++++|+.+|++|++++|+++.++..++.+..
T Consensus 83 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~l~~ 116 (117)
T d1elwa_ 83 FLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA 116 (117)
T ss_dssp HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHhC
Confidence 9999999999999999999999999999988753
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=3e-17 Score=156.51 Aligned_cols=138 Identities=5% Similarity=-0.055 Sum_probs=128.6
Q ss_pred HHHHHHHhccccccccc-hhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 010932 358 VHDILLKTGYKDEEGAE-NELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRAL 432 (497)
Q Consensus 358 ~~~~~~~~g~~~~~~~~-~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~ 432 (497)
...++..+|..+...+. +++|+..+++++ ++..+|..+|.++..+|++++|+..|++||+ ++|++..+|+++|.
T Consensus 76 ~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~~~~a~~~~~~~~~~l~~~~eAl~~~~kal~-~dp~n~~a~~~~~~ 154 (315)
T d2h6fa1 76 NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILN-QDAKNYHAWQHRQW 154 (315)
T ss_dssp CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHH-HCTTCHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhhhHHHHHhHHHHhhccHHHHHHHHhhhhh-hhhcchHHHHHHHH
Confidence 45678888888877664 899999999998 7899999999999999999999999999999 99999999999999
Q ss_pred HHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCC------hHHHHHHHHHhhcCccccccCCC
Q 010932 433 SYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGM------ETDAQDMLNDGASFEAKKQNSWR 496 (497)
Q Consensus 433 ~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~------~~~A~~~~~~a~~l~~~~~~~~~ 496 (497)
++..+|++++|+.+|++||+++|++..||+++|.++..++. +++|++.+.+|++++|++..+|.
T Consensus 155 ~~~~~~~~~~Al~~~~~al~~~p~n~~a~~~r~~~l~~~~~~~~~~~~~~ai~~~~~al~~~P~~~~~~~ 224 (315)
T d2h6fa1 155 VIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWN 224 (315)
T ss_dssp HHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHCCccHHHHHHHHHHHHHccccchhhhhHHhHHHHHHHHHhCCCchHHHH
Confidence 99999999999999999999999999999999999999888 58999999999999999988873
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=2.9e-16 Score=138.21 Aligned_cols=100 Identities=13% Similarity=0.134 Sum_probs=92.0
Q ss_pred HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q 010932 388 DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALA 467 (497)
Q Consensus 388 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 467 (497)
.+..++++|..++..|+|++|++.|+++ .|.++.+|+|+|.+|..+|+|++|+++|++||+++|+++.+|+++|.+
T Consensus 4 ~~~~l~~~g~~~~~~~d~~~Al~~~~~i----~~~~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~~~~a~~~~g~~ 79 (192)
T d1hh8a_ 4 EAISLWNEGVLAADKKDWKGALDAFSAV----QDPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGML 79 (192)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTS----SSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHhc----CCCCHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhhhHHHHHHH
Confidence 4567789999999999999999999853 455789999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHhhcCcccc
Q 010932 468 LNKLGMETDAQDMLNDGASFEAKK 491 (497)
Q Consensus 468 ~~~~~~~~~A~~~~~~a~~l~~~~ 491 (497)
+.++|+|++|+++|++|+...+.+
T Consensus 80 ~~~~g~~~~A~~~~~kAl~~~~~n 103 (192)
T d1hh8a_ 80 YYQTEKYDLAIKDLKEALIQLRGN 103 (192)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTTTC
T ss_pred HHhhccHHHHHHHHHHHHHhCccC
Confidence 999999999999999999876554
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.66 E-value=3.2e-16 Score=144.37 Aligned_cols=134 Identities=13% Similarity=0.110 Sum_probs=122.5
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRAL 432 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~ 432 (497)
.....++.+|..+...|++++|+..|++++ +++.+++.+|.++...|++++|+..|+++++ ++|+++.+|+++|.
T Consensus 35 ~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~-~~p~~~~a~~~lg~ 113 (259)
T d1xnfa_ 35 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLE-LDPTYNYAHLNRGI 113 (259)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCCCHHHHhhhchHHHHHHHHHHhhhhhhHHHH-HHhhhhhhHHHHHH
Confidence 466889999999999999999999999999 6899999999999999999999999999999 99999999999999
Q ss_pred HHHhhhcHHHHHHHHHHHHHhCCCChHH----------------------------------------------------
Q 010932 433 SYLMIEQAELALRDAMQAQVCLPEWPTA---------------------------------------------------- 460 (497)
Q Consensus 433 ~~~~~~~~~~A~~~~~~al~l~p~~~~a---------------------------------------------------- 460 (497)
+|..+|++++|+..|+++++++|++..+
T Consensus 114 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (259)
T d1xnfa_ 114 ALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMER 193 (259)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhhhHHHHHHHHHHhhccchhhhhhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988875443
Q ss_pred ------------------HHHHHHHHHHCCChHHHHHHHHHhhcCcccc
Q 010932 461 ------------------FYMQALALNKLGMETDAQDMLNDGASFEAKK 491 (497)
Q Consensus 461 ------------------~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~ 491 (497)
|+++|.+|..+|++++|+.+|++|++++|++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 242 (259)
T d1xnfa_ 194 LKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHN 242 (259)
T ss_dssp HHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHhhhcCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCC
Confidence 3367888888888888888888888888864
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=2e-16 Score=153.40 Aligned_cols=136 Identities=12% Similarity=0.044 Sum_probs=129.1
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
...+...|..+...|++++|+..|++++ +++..+..+|..+...|++++|+..|++++. ..|.++.++..+|.++
T Consensus 237 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~l~~~~ 315 (388)
T d1w3ba_ 237 AVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALR-LCPTHADSLNNLANIK 315 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHhhhc-cCCccchhhhHHHHHH
Confidence 3556778888889999999999999998 5688999999999999999999999999999 9999999999999999
Q ss_pred HhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 435 LMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
..+|++++|+..|+++++++|+++.+|+++|.+|..+|++++|+++|++|++++|++..+|
T Consensus 316 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~P~~~~a~ 376 (388)
T d1w3ba_ 316 REQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAY 376 (388)
T ss_dssp HTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998876
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=2.1e-16 Score=127.65 Aligned_cols=102 Identities=7% Similarity=-0.081 Sum_probs=94.0
Q ss_pred HHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHh---hhcHHHHHHHHHHHHHhCCCC--hHHHHHHHHH
Q 010932 393 KKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLM---IEQAELALRDAMQAQVCLPEW--PTAFYMQALA 467 (497)
Q Consensus 393 ~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~---~~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~ 467 (497)
-++++.+...++|++|.+.|++|+. ++|+++.+++|+|.++.+ .+++++|+..|+++++.+|+. +++||++|.+
T Consensus 3 ~~l~n~~~~~~~l~~Ae~~Y~~aL~-~~p~~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~ 81 (122)
T d1nzna_ 3 EAVLNELVSVEDLLKFEKKFQSEKA-AGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVG 81 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-HSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHh-hCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Confidence 3577889999999999999999999 999999999999999986 677788999999999999876 5699999999
Q ss_pred HHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 468 LNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 468 ~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
|.++|+|++|+++|++|++++|++..|.
T Consensus 82 y~~~g~~~~A~~~~~~aL~~~P~~~~A~ 109 (122)
T d1nzna_ 82 NYRLKEYEKALKYVRGLLQTEPQNNQAK 109 (122)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHhCcCCHHHH
Confidence 9999999999999999999999987664
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=6.9e-16 Score=131.43 Aligned_cols=125 Identities=14% Similarity=0.016 Sum_probs=113.4
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRAL 432 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~ 432 (497)
+..+.+..+|..++..|+++.|+..|++++ .++..|+++|.+++..|++++|+.+|++||+ ++|+++.+|+++|.
T Consensus 8 ~~a~~l~~~gn~~~~~~~y~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~kal~-~~p~~~~a~~~~g~ 86 (159)
T d1a17a_ 8 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIE-LDKKYIKGYYRRAA 86 (159)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHhhhccccchhhhhhhhhhHHHHHhccccchHHHHHHHHHH-HcccchHHHHHHHH
Confidence 455778899999999999999999999999 7899999999999999999999999999999 99999999999999
Q ss_pred HHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHH--HHCCChHHHHHHHH
Q 010932 433 SYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALAL--NKLGMETDAQDMLN 482 (497)
Q Consensus 433 ~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~--~~~~~~~~A~~~~~ 482 (497)
++..+|+|++|+.+|+++++++|+++.++..++.+. ...+.+++|+....
T Consensus 87 ~~~~~g~~~eA~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~~~~~a~~~~~ 138 (159)
T d1a17a_ 87 SNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDE 138 (159)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 999999999999999999999999999998888764 44555777765433
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.63 E-value=1.4e-15 Score=130.91 Aligned_cols=121 Identities=16% Similarity=0.190 Sum_probs=110.4
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHH--------------------HHHHHHHHHHhHHhhcccHHHHHHHHHHHh
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQV--------------------QDMLNTKKFGDIAFRDKDFKNAIEYYSKLV 416 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~--------------------~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai 416 (497)
...+.+...|..++..++++.|+..|++++ ..+..+.++|.+++++|+|++|+..|++||
T Consensus 25 ~~a~~~~~~~~~~~~~~~y~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al 104 (169)
T d1ihga1 25 LISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEAL 104 (169)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhhhhHHHHHhChhhHHHHHHHHHHHHhhcccchhhhhhhhhh
Confidence 445667788999999999999999999987 245567889999999999999999999999
Q ss_pred hcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHH
Q 010932 417 SMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQ 478 (497)
Q Consensus 417 ~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~ 478 (497)
+ ++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..++..++.++..+..+.++.
T Consensus 105 ~-~~p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~~~l~~~~~~l~~~~~~~ 165 (169)
T d1ihga1 105 E-IDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKE 165 (169)
T ss_dssp T-TCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred h-hhhhhhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9 999999999999999999999999999999999999999999999999998888777664
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=6.1e-16 Score=147.39 Aligned_cols=123 Identities=12% Similarity=0.102 Sum_probs=112.0
Q ss_pred ccchhhhhhHHHHHHH------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHH
Q 010932 372 GAENELSFQEWTQQVQ------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALR 445 (497)
Q Consensus 372 ~~~~e~a~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~ 445 (497)
.+.+..++..|.+++. ++..+...|..+...|++++|+..|++++. .+|+++.+|+++|.+|..+|++++|+.
T Consensus 149 ~~~~~~a~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~-~~p~~~~~~~~lg~~~~~~g~~~~A~~ 227 (323)
T d1fcha_ 149 DSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALS-VRPNDYLLWNKLGATLANGNQSEEAVA 227 (323)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhhhcccccccc-cccccccchhhhhhcccccccchhHHH
Confidence 3556778888888773 467889999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 446 DAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 446 ~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
.|+++++++|+++.+|+++|.+|..+|++++|+++|++|++++|++...+
T Consensus 228 ~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~ 277 (323)
T d1fcha_ 228 AYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPR 277 (323)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCcChhhh
Confidence 99999999999999999999999999999999999999999999877654
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.62 E-value=1.6e-16 Score=133.05 Aligned_cols=99 Identities=10% Similarity=-0.009 Sum_probs=89.8
Q ss_pred HhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhh----------hcHHHHHHHHHHHHHhCCCChHHHHHHH
Q 010932 396 GDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMI----------EQAELALRDAMQAQVCLPEWPTAFYMQA 465 (497)
Q Consensus 396 g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~----------~~~~~A~~~~~~al~l~p~~~~a~~~~g 465 (497)
+..+.+++.|++|+..|++|++ ++|+++++|+++|.++..+ +.+++|+..|++||+++|+++.+|+++|
T Consensus 4 ~~~~~r~~~fe~A~~~~e~al~-~~P~~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~~~~a~~~lG 82 (145)
T d1zu2a1 4 ETEFDRILLFEQIRQDAENTYK-SNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIG 82 (145)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hHHHHHHccHHHHHHHHHHHHh-hCCcchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcchhhHHHhhHH
Confidence 3456788999999999999999 9999999999999999865 5568999999999999999999999999
Q ss_pred HHHHHCCC-----------hHHHHHHHHHhhcCccccccCC
Q 010932 466 LALNKLGM-----------ETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 466 ~~~~~~~~-----------~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
.+|..+|+ |++|+++|++|++++|++..+|
T Consensus 83 ~~y~~~g~~~~~~~~~~~~~~~A~~~~~kal~l~P~~~~~~ 123 (145)
T d1zu2a1 83 NAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYL 123 (145)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHcccchhhHHHHHHhHHHhhhhhhcccccCCCHHHHH
Confidence 99988764 7999999999999999987665
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.61 E-value=2.7e-15 Score=128.94 Aligned_cols=121 Identities=13% Similarity=0.121 Sum_probs=111.0
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHHH-------------------HHHHHHHHHhHHhhcccHHHHHHHHHHHhh
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQVQ-------------------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVS 417 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~-------------------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~ 417 (497)
...+.+...|..++..|.+++|+..|++++. ....+.++|.+++++|+|++|+.+|+++++
T Consensus 13 ~~a~~~~e~G~~~~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Ai~~~~~al~ 92 (168)
T d1kt1a1 13 EQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALG 92 (168)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhccchhhhhhcchhHHHHHHhHHHHHHHhhhcccchhhhhhhhh
Confidence 3467888999999999999999999999882 234567899999999999999999999999
Q ss_pred cCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHH
Q 010932 418 MMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQ 478 (497)
Q Consensus 418 ~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~ 478 (497)
++|++..+|+++|.+|..+|+|++|+.+|++|++++|++..++..++.+...++++.+..
T Consensus 93 -l~p~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~e~~ 152 (168)
T d1kt1a1 93 -LDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMCQKKAKEHNERD 152 (168)
T ss_dssp -HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhHHHHH
Confidence 999999999999999999999999999999999999999999999999998888776543
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=2.1e-15 Score=129.87 Aligned_cols=122 Identities=15% Similarity=0.150 Sum_probs=111.6
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHHH-------------------HHHHHHHHHhHHhhcccHHHHHHHHHHHhh
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQVQ-------------------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVS 417 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~-------------------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~ 417 (497)
.....+...|..++..++++.|+..|++++. ....+.++|.++++.|+|++|+..+++||.
T Consensus 11 ~~a~~l~~~G~~~~~~~~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~~~~~~al~ 90 (170)
T d1p5qa1 11 EQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALE 90 (170)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhcccccchhhhhhh
Confidence 3567788899999999999999999999882 244567899999999999999999999999
Q ss_pred cCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHH
Q 010932 418 MMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQD 479 (497)
Q Consensus 418 ~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~ 479 (497)
++|+++.+|+++|.||+.+|+|++|+.+|++|++++|+++.+...++.++..++.+.+...
T Consensus 91 -~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~ 151 (170)
T d1p5qa1 91 -LDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREK 151 (170)
T ss_dssp -HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -ccccchhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998888876643
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.59 E-value=2.5e-15 Score=126.92 Aligned_cols=116 Identities=14% Similarity=0.107 Sum_probs=105.6
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHHH--------------------HHHHHHHHHhHHhhcccHHHHHHHHHHHh
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQVQ--------------------DMLNTKKFGDIAFRDKDFKNAIEYYSKLV 416 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~--------------------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai 416 (497)
.....+...|..++..|+++.|+..|+++++ ....+.++|.+++++|+|++|+.+|++||
T Consensus 15 ~~a~~~~~~G~~~f~~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Al~~~~~al 94 (153)
T d2fbna1 15 QSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVL 94 (153)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcchhhhhhHHHHHhhhhHHHHHHhhHHHHHHHhcccchhhhhhhccc
Confidence 3456678899999999999999999999882 23466789999999999999999999999
Q ss_pred hcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCC
Q 010932 417 SMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGM 473 (497)
Q Consensus 417 ~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~ 473 (497)
+ ++|++..+|+++|.+|..+|++++|+.+|++|++++|++..+...++.+..++++
T Consensus 95 ~-~~p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~kl~~ 150 (153)
T d2fbna1 95 K-IDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKE 150 (153)
T ss_dssp H-HSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHH
T ss_pred c-ccchhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 9 9999999999999999999999999999999999999999999999998877643
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.58 E-value=2.2e-15 Score=127.77 Aligned_cols=107 Identities=16% Similarity=0.160 Sum_probs=94.3
Q ss_pred HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc------------HHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCC
Q 010932 388 DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS------------GTVFVRRALSYLMIEQAELALRDAMQAQVCLP 455 (497)
Q Consensus 388 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~------------~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p 455 (497)
.+..+...|+.++..|+|++|+..|++||+ +.|+. +.+|.|+|.+|..+|+|++|+.++++++++.|
T Consensus 8 ~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~-i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~ 86 (156)
T d2hr2a1 8 GAYLALSDAQRQLVAGEYDEAAANCRRAME-ISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFN 86 (156)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhccc
Confidence 444556679999999999999999999999 87764 46899999999999999999999999999855
Q ss_pred C-----------ChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 456 E-----------WPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 456 ~-----------~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
. +..+|+++|.+|..+|++++|+++|++|+++.|+....+
T Consensus 87 ~~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~l~~~~~~~~ 137 (156)
T d2hr2a1 87 RRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGET 137 (156)
T ss_dssp HHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCC
T ss_pred ccccccccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHhhchH
Confidence 3 356899999999999999999999999999998876654
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.58 E-value=5.2e-16 Score=137.25 Aligned_cols=123 Identities=9% Similarity=-0.019 Sum_probs=106.9
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
.+.+...|..++..|+++.|+..|++++ .++..|.++|.++.+.|+|++|+.+|++||+ ++|+++.+|+++|.+|
T Consensus 4 a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~-l~p~~~~a~~~lg~~~ 82 (201)
T d2c2la1 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALE-LDGQSVKAHFFLGQCQ 82 (201)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTT-SCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHhhhhhhhhhhHHHHHHHH-hCCCcHHHHHHHHHHH
Confidence 3567889999999999999999999999 6899999999999999999999999999999 9999999999999999
Q ss_pred HhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHH
Q 010932 435 LMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLN 482 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~ 482 (497)
..+|+|++|+.+|++|++++|++...+...+..+...++...+.....
T Consensus 83 ~~l~~~~~A~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~~ 130 (201)
T d2c2la1 83 LEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEE 130 (201)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 999999999999999999999876655555555555544444444333
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=9.1e-15 Score=141.42 Aligned_cols=136 Identities=10% Similarity=0.027 Sum_probs=128.7
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY 434 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~ 434 (497)
.+.+...|..+...+++++|+..|++.+ ..+..+..+|.+++..|++++|+..|+++++ ++|+++.+|+++|.++
T Consensus 203 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~-~~p~~~~~~~~l~~~~ 281 (388)
T d1w3ba_ 203 LDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIE-LQPHFPDAYCNLANAL 281 (388)
T ss_dssp HHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-TCSSCHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhccccHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-hCCCCHHHHHHHHHHH
Confidence 4567788889999999999999999877 5678889999999999999999999999999 9999999999999999
Q ss_pred HhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 435 LMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
..+|++++|+..+++++...|.+..+++.+|.++..+|++++|++.|++|++++|+...+|
T Consensus 282 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 342 (388)
T d1w3ba_ 282 KEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAH 342 (388)
T ss_dssp HHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHH
T ss_pred HHcCCHHHHHHHHHhhhccCCccchhhhHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999987765
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=1.5e-14 Score=137.64 Aligned_cols=136 Identities=9% Similarity=-0.000 Sum_probs=117.7
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCC-------------
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSV------------- 421 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p------------- 421 (497)
.+++..+|..+...|+++.|+..|++++ +++..+..+|..+...|++++|++.|++++. .+|
T Consensus 53 ~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~~~~~~ 131 (323)
T d1fcha_ 53 MEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLR-YTPAYAHLVTPAEEGA 131 (323)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-TSTTTGGGCC------
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHH-hccchHHHHHhhhhhh
Confidence 4567888888888888888888888888 4677888888888888888888877777665 433
Q ss_pred ------------------------------------C--cHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHH
Q 010932 422 ------------------------------------P--SGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYM 463 (497)
Q Consensus 422 ------------------------------------~--~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 463 (497)
+ ++.+++++|.++..+|++++|+..|++++.++|+++.+|++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 211 (323)
T d1fcha_ 132 GGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNK 211 (323)
T ss_dssp ---------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hhcccccchhhHHHHHHhhHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhhhcccccccccccccccchhh
Confidence 3 25678899999999999999999999999999999999999
Q ss_pred HHHHHHHCCChHHHHHHHHHhhcCccccccCC
Q 010932 464 QALALNKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 464 ~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
+|.+|..+|++++|+++|++|++++|++..+|
T Consensus 212 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~ 243 (323)
T d1fcha_ 212 LGATLANGNQSEEAVAAYRRALELQPGYIRSR 243 (323)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hhhcccccccchhHHHHHHHHHHHhhccHHHH
Confidence 99999999999999999999999999988776
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.48 E-value=3.2e-14 Score=118.72 Aligned_cols=110 Identities=13% Similarity=0.048 Sum_probs=97.0
Q ss_pred cccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhh----------cccHHHHHHHHHHHhhcCCCCcHHHHHHHHH
Q 010932 367 YKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFR----------DKDFKNAIEYYSKLVSMMSVPSGTVFVRRAL 432 (497)
Q Consensus 367 ~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~----------~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~ 432 (497)
..+...+.+++|+..|++++ +++.++++.|.++.. .+.+++|+..|++||+ ++|+++.+|+++|.
T Consensus 5 ~~~~r~~~fe~A~~~~e~al~~~P~~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~-l~P~~~~a~~~lG~ 83 (145)
T d1zu2a1 5 TEFDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALL-IDPKKDEAVWCIGN 83 (145)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH-HCTTCHHHHHHHHH
T ss_pred HHHHHHccHHHHHHHHHHHHhhCCcchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHH-hcchhhHHHhhHHH
Confidence 34445677899999999998 789999999999985 4566899999999999 99999999999999
Q ss_pred HHHhhhc-----------HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHH
Q 010932 433 SYLMIEQ-----------AELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDA 477 (497)
Q Consensus 433 ~~~~~~~-----------~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A 477 (497)
+|..+|+ |++|+..|++|++++|++..++..++.+....+.+.++
T Consensus 84 ~y~~~g~~~~~~~~~~~~~~~A~~~~~kal~l~P~~~~~~~~L~~~~ka~~~~~e~ 139 (145)
T d1zu2a1 84 AYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEA 139 (145)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHcccchhhHHHHHHhHHHhhhhhhcccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9998865 79999999999999999999999999998777666655
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=7.1e-14 Score=107.40 Aligned_cols=83 Identities=11% Similarity=0.020 Sum_probs=75.3
Q ss_pred HHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCC-------cHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHH
Q 010932 389 MLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVP-------SGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAF 461 (497)
Q Consensus 389 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~-------~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 461 (497)
++.+++.|.++++.|+|++|+..|++|++ +.|. .+.++.++|.++.++|++++|+..|++||+++|+++.++
T Consensus 5 addc~~lG~~~~~~g~y~~A~~~~~~Al~-~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~ 83 (95)
T d1tjca_ 5 AEDSFELGKVAYTEADYYHTELWMEQALR-QLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (95)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHH
Confidence 56789999999999999999999999998 6443 378999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCC
Q 010932 462 YMQALALNKLG 472 (497)
Q Consensus 462 ~~~g~~~~~~~ 472 (497)
++++.....++
T Consensus 84 ~Nl~~~~~~l~ 94 (95)
T d1tjca_ 84 GNLKYFEYIMA 94 (95)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhC
Confidence 99988766553
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=1e-13 Score=111.60 Aligned_cols=102 Identities=11% Similarity=0.023 Sum_probs=91.3
Q ss_pred cccccchhhhhhHHHHHH----HHHHHHHHHHhHHhh---cccHHHHHHHHHHHhhcCCCCc--HHHHHHHHHHHHhhhc
Q 010932 369 DEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFR---DKDFKNAIEYYSKLVSMMSVPS--GTVFVRRALSYLMIEQ 439 (497)
Q Consensus 369 ~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~---~~~~~~Ai~~~~~ai~~~~p~~--~~~~~~~g~~~~~~~~ 439 (497)
....++++.|.+.|++++ .++..+++.|.++.+ .+++++|+..|++++. .+|.+ ..+|+++|.+|.++|+
T Consensus 9 ~~~~~~l~~Ae~~Y~~aL~~~p~~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~-~~~~~~~~~~~~~Lg~~y~~~g~ 87 (122)
T d1nzna_ 9 LVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLP-KGSKEEQRDYVFYLAVGNYRLKE 87 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTT-TSCHHHHHHHHHHHHHHHHHTTC
T ss_pred hcCHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHh-ccCCchHHHHHHHHHHHHHHHhh
Confidence 445678899999999999 578999999999986 5677889999999999 88765 5699999999999999
Q ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHC
Q 010932 440 AELALRDAMQAQVCLPEWPTAFYMQALALNKL 471 (497)
Q Consensus 440 ~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~ 471 (497)
|++|+..|+++|+++|++.+|...++.+..++
T Consensus 88 ~~~A~~~~~~aL~~~P~~~~A~~l~~~I~~~~ 119 (122)
T d1nzna_ 88 YEKALKYVRGLLQTEPQNNQAKELERLIDKAM 119 (122)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999887664
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.35 E-value=6.9e-13 Score=105.20 Aligned_cols=89 Identities=12% Similarity=-0.056 Sum_probs=85.2
Q ss_pred HHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhh
Q 010932 362 LLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMI 437 (497)
Q Consensus 362 ~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~ 437 (497)
.+..|..+...|++++|+..|++++ +++.+|+.+|.++.+.|++++|+.+|++||+ ++|+++.+|+++|.+|..+
T Consensus 19 ~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~-~~p~~~~a~~~la~~y~~~ 97 (112)
T d1hxia_ 19 PMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARM-LDPKDIAVHAALAVSHTNE 97 (112)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHhhhcccccccchhhhhhhhhhhhhhhHHHhhcccccccc-cccccccchHHHHHHHHHC
Confidence 4677889999999999999999999 6799999999999999999999999999999 9999999999999999999
Q ss_pred hcHHHHHHHHHHHH
Q 010932 438 EQAELALRDAMQAQ 451 (497)
Q Consensus 438 ~~~~~A~~~~~~al 451 (497)
|++++|++.++++|
T Consensus 98 g~~~~A~~~l~~~l 111 (112)
T d1hxia_ 98 HNANAALASLRAWL 111 (112)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHh
Confidence 99999999999986
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.28 E-value=3.8e-12 Score=103.42 Aligned_cols=105 Identities=11% Similarity=0.116 Sum_probs=91.7
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcH-------HHH
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSG-------TVF 427 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~-------~~~ 427 (497)
+..+.+.|..++..+++++|+.+|++++ +++..++++|.++++.|+|++|+.+|++||+ ++|.+. .+|
T Consensus 4 a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-l~~~~~~~~~~~a~~~ 82 (128)
T d1elra_ 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIE-VGRENREDYRQIAKAY 82 (128)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHhHHHHHHHcCchHHHHHHHHHHHH-hCcccHHHHHHHHHHH
Confidence 4567789999999999999999999999 6789999999999999999999999999999 988875 467
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHH
Q 010932 428 VRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQA 465 (497)
Q Consensus 428 ~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 465 (497)
+++|.++..++++++|+..|++++.++|+ ++....+.
T Consensus 83 ~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~ 119 (128)
T d1elra_ 83 ARIGNSYFKEEKYKDAIHFYNKSLAEHRT-PDVLKKCQ 119 (128)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCC-HHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCC-HHHHHHHH
Confidence 77888888889999999999999999876 45544443
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.26 E-value=7.2e-12 Score=117.14 Aligned_cols=136 Identities=9% Similarity=-0.064 Sum_probs=118.6
Q ss_pred hHHHHHHHHhccccccccchhhhhhHHHHHHH----------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc--
Q 010932 356 TAVHDILLKTGYKDEEGAENELSFQEWTQQVQ----------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS-- 423 (497)
Q Consensus 356 ~~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~~----------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~-- 423 (497)
++-.+.+.+.|..+...+++++|+..|.++++ .+..+.+.|.++.+.|++++|+.+|+++++ +.+..
T Consensus 34 ~~Aa~~y~~aa~~y~~~~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~-~~~~~~~ 112 (290)
T d1qqea_ 34 EEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQ-IFTHRGQ 112 (290)
T ss_dssp HHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HHHHTTC
T ss_pred HHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhH-Hhhhccc
Confidence 45577889999999999999999999999883 357789999999999999999999999998 65554
Q ss_pred ----HHHHHHHHHHHHh-hhcHHHHHHHHHHHHHhCCC------ChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccc
Q 010932 424 ----GTVFVRRALSYLM-IEQAELALRDAMQAQVCLPE------WPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQ 492 (497)
Q Consensus 424 ----~~~~~~~g~~~~~-~~~~~~A~~~~~~al~l~p~------~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~ 492 (497)
..++.++|.+|.. +|++++|+..|++|+++.+. ...++.++|.++..+|+|++|+..|++++.+.++..
T Consensus 113 ~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~~~~~~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~~~~~~ 192 (290)
T d1qqea_ 113 FRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNR 192 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCT
T ss_pred chhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHcChHHHHHHHHHHHHHhCccch
Confidence 6788999988855 79999999999999988543 256799999999999999999999999999887654
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.26 E-value=4.4e-11 Score=102.84 Aligned_cols=98 Identities=12% Similarity=-0.004 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc----------------------HHHHHHHHHHHHhhhcHHHH
Q 010932 386 VQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS----------------------GTVFVRRALSYLMIEQAELA 443 (497)
Q Consensus 386 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~----------------------~~~~~~~g~~~~~~~~~~~A 443 (497)
+...+.+...|..+...|++++|++.|++|+. +.+.. ..++.+++.++..+|++++|
T Consensus 8 ~~~f~~~~~~g~~~~~~g~~e~A~~~~~~AL~-l~rG~~l~~~~~~~w~~~~r~~l~~~~~~a~~~la~~~~~~g~~~~A 86 (179)
T d2ff4a2 8 LGRFVAEKTAGVHAAAAGRFEQASRHLSAALR-EWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAV 86 (179)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT-TCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHh-hCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHH
Confidence 35667889999999999999999999999999 76643 26889999999999999999
Q ss_pred HHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHh
Q 010932 444 LRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDG 484 (497)
Q Consensus 444 ~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a 484 (497)
+.+++++++++|.+..+|..++.+|..+|++.+|+..|+++
T Consensus 87 l~~~~~al~~~P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~ 127 (179)
T d2ff4a2 87 IAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRV 127 (179)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999997
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.22 E-value=4.8e-12 Score=96.85 Aligned_cols=73 Identities=11% Similarity=-0.127 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCC-------hHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCCC
Q 010932 424 GTVFVRRALSYLMIEQAELALRDAMQAQVCLPEW-------PTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSWR 496 (497)
Q Consensus 424 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~-------~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~~ 496 (497)
++-+|++|.+++++|+|++|+..|++|+++.|++ +++++++|.++.++|++++|+++|++|++++|++..+++
T Consensus 5 addc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~~ 84 (95)
T d1tjca_ 5 AEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (95)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHHH
Confidence 6678999999999999999999999999996654 689999999999999999999999999999999987753
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.22 E-value=3.8e-11 Score=112.06 Aligned_cols=138 Identities=14% Similarity=0.034 Sum_probs=114.6
Q ss_pred HHHHHHHHhccccccccchhhhhhHHHHHH----------HHHHHHHHHHhHHhh-cccHHHHHHHHHHHhhcCCCC---
Q 010932 357 AVHDILLKTGYKDEEGAENELSFQEWTQQV----------QDMLNTKKFGDIAFR-DKDFKNAIEYYSKLVSMMSVP--- 422 (497)
Q Consensus 357 ~~~~~~~~~g~~~~~~~~~e~a~~~~~~~~----------~~~~~~~~~g~~~~~-~~~~~~Ai~~~~~ai~~~~p~--- 422 (497)
.....+.+.|.++...+.+++|++.|++++ ..+..+.+.|..+.. .|+|++|+..|++|++ +.+.
T Consensus 75 ~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~-l~~~~~~ 153 (290)
T d1qqea_ 75 EAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGE-WYAQDQS 153 (290)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH-HHHHTTC
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHH-HHHhcCc
Confidence 456788999999999999999999999988 336778889988865 6999999999999998 5322
Q ss_pred ---cHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCCh-------HHHHHHHHHHHHCCChHHHHHHHHHhhcCccccc
Q 010932 423 ---SGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWP-------TAFYMQALALNKLGMETDAQDMLNDGASFEAKKQ 492 (497)
Q Consensus 423 ---~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~-------~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~ 492 (497)
...++.++|.++..+|+|++|+..|++++.+.|+.. ..+++.|.++...|+++.|...|+++.+++|...
T Consensus 154 ~~~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~A~~~~~~~~~~~~~~~ 233 (290)
T d1qqea_ 154 VALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFA 233 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-----
T ss_pred hhhhhhHHHHHHHHHHHcChHHHHHHHHHHHHHhCccchhhhhhHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcc
Confidence 256799999999999999999999999999988874 4578899999999999999999999999998766
Q ss_pred cCC
Q 010932 493 NSW 495 (497)
Q Consensus 493 ~~~ 495 (497)
+++
T Consensus 234 ~sr 236 (290)
T d1qqea_ 234 DSR 236 (290)
T ss_dssp ---
T ss_pred chH
Confidence 553
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.21 E-value=5.2e-13 Score=127.66 Aligned_cols=137 Identities=7% Similarity=-0.091 Sum_probs=119.0
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhh
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQVQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIE 438 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~ 438 (497)
...+..+|..+...|+++.|+..++++++-..........+...+.+++|+..|.+++. .+|.+..++.++|.++..++
T Consensus 178 ~~a~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~l~-~~~~~~~~~~~l~~~~~~~~ 256 (334)
T d1dcea1 178 YSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLL-GRAEPLFRCELSVEKSTVLQ 256 (334)
T ss_dssp HHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHH-SCCCCSSSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHhHHhHHHHHHHHHHHHHhcchhHHHHHHHHHHH-hCcchhhHHHHHHHHHHHHh
Confidence 45667777777777777777777777664444444455556667778889999999999 99999999999999999999
Q ss_pred cHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCCC
Q 010932 439 QAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSWR 496 (497)
Q Consensus 439 ~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~~ 496 (497)
++++|+..+.++++.+|++..+|+.+|.+|..+|++++|+++|++|+++||.+.++|+
T Consensus 257 ~~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~eA~~~~~~ai~ldP~~~~y~~ 314 (334)
T d1dcea1 257 SELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD 314 (334)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH
T ss_pred hHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcccHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998885
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.19 E-value=3.9e-11 Score=114.26 Aligned_cols=123 Identities=8% Similarity=-0.020 Sum_probs=105.9
Q ss_pred cchhhhhhHHHHHH----HHHHHHHHHHhH----------HhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhh
Q 010932 373 AENELSFQEWTQQV----QDMLNTKKFGDI----------AFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIE 438 (497)
Q Consensus 373 ~~~e~a~~~~~~~~----~~~~~~~~~g~~----------~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~ 438 (497)
...++|+..+++++ ++..+|..++.. +...|++++|+.+|+++++ .+|+++.+|+++|.++..++
T Consensus 43 ~~~~~al~~~~~~l~~~P~~~~a~~~r~~~l~~l~~~~~~~~~~~~~~~al~~~~~~l~-~~pk~~~~~~~~~~~~~~~~ 121 (334)
T d1dcea1 43 ELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLR-VNPKSYGTWHHRCWLLSRLP 121 (334)
T ss_dssp CCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHTCS
T ss_pred cccHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHhhHHHHHhc
Confidence 33488999999988 455566555544 4455669999999999999 99999999999999998887
Q ss_pred c--HHHHHHHHHHHHHhCCCChHHH-HHHHHHHHHCCChHHHHHHHHHhhcCccccccCCC
Q 010932 439 Q--AELALRDAMQAQVCLPEWPTAF-YMQALALNKLGMETDAQDMLNDGASFEAKKQNSWR 496 (497)
Q Consensus 439 ~--~~~A~~~~~~al~l~p~~~~a~-~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~~ 496 (497)
+ +++|+..++++++++|++..++ +.+|.++...+++++|+..++++++++|.+..+|+
T Consensus 122 ~~~~~~a~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Al~~~~~~i~~~p~~~~a~~ 182 (334)
T d1dcea1 122 EPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWH 182 (334)
T ss_dssp SCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHH
T ss_pred cccHHHHHHHHHHHHhhCchhhhhhhhHHHHHHHhccccHHHHHHHHHHHHcCCCCHHHHH
Confidence 6 8999999999999999999986 46788999999999999999999999999988874
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.19 E-value=6.7e-12 Score=105.76 Aligned_cols=101 Identities=12% Similarity=0.071 Sum_probs=85.2
Q ss_pred HHHHHHH--HhccccccccchhhhhhHHHHHHH----------------HHHHHHHHHhHHhhcccHHHHHHHHHHHhhc
Q 010932 357 AVHDILL--KTGYKDEEGAENELSFQEWTQQVQ----------------DMLNTKKFGDIAFRDKDFKNAIEYYSKLVSM 418 (497)
Q Consensus 357 ~~~~~~~--~~g~~~~~~~~~e~a~~~~~~~~~----------------~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~ 418 (497)
++.+.+. ..|..++..|++++|++.|+++++ .+..+.++|.++..+|+|++|+..|+++|.
T Consensus 5 ~~a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~- 83 (156)
T d2hr2a1 5 EVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALH- 83 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhh-
Confidence 3344444 458888889999999999999983 467889999999999999999999999997
Q ss_pred CCCC-----------cHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCCh
Q 010932 419 MSVP-----------SGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWP 458 (497)
Q Consensus 419 ~~p~-----------~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 458 (497)
+.|. ...+|+++|.+|..+|++++|+.+|++|+++.|+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~l~~~~~ 134 (156)
T d2hr2a1 84 YFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK 134 (156)
T ss_dssp HHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred cccccccccccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHhh
Confidence 5432 245799999999999999999999999999977653
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.15 E-value=6.2e-12 Score=126.84 Aligned_cols=119 Identities=11% Similarity=-0.026 Sum_probs=62.1
Q ss_pred cchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHH
Q 010932 373 AENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAM 448 (497)
Q Consensus 373 ~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~ 448 (497)
+.|+.++..+.++. +++..+.+.|..+.+.|++++|+..|.+++. ++| ..++.++|.++...|+|++|+..|+
T Consensus 100 ~~Y~~ai~~l~~~~~l~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~-~~~--~~~~~~LG~l~~~~~~~~~A~~~y~ 176 (497)
T d1ya0a1 100 GFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCS-YIC--QHCLVHLGDIARYRNQTSQAESYYR 176 (497)
T ss_dssp HHHHHHHHHHTC-------------------------------CCHHHH-HHH--HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCChhhHHHHHHhHHHHHhCCCHHHHHHHHHHHhC-CCH--HHHHHHHHHHHHHcccHHHHHHHHH
Confidence 33444544444433 4566666777777777777777777777776 444 4566777777777777777777777
Q ss_pred HHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccC
Q 010932 449 QAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNS 494 (497)
Q Consensus 449 ~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~ 494 (497)
+|++++|++..+|+++|.++...|++.+|+.+|.+|+.+++....|
T Consensus 177 ~A~~l~P~~~~~~~~Lg~~~~~~~~~~~A~~~y~ral~~~~~~~~a 222 (497)
T d1ya0a1 177 HAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAA 222 (497)
T ss_dssp HHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHH
T ss_pred HHHHHCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCCCCHHH
Confidence 7777777777777777777777777777777777777776665554
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=1.7e-10 Score=116.06 Aligned_cols=114 Identities=13% Similarity=0.024 Sum_probs=85.6
Q ss_pred HHHHHHhccccccccchhhhhhHHHHHH--HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHh
Q 010932 359 HDILLKTGYKDEEGAENELSFQEWTQQV--QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLM 436 (497)
Q Consensus 359 ~~~~~~~g~~~~~~~~~e~a~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~ 436 (497)
...+...|..+...++.+.|+..+.+++ .....+..+|..+...|+|++|+.+|.+|++ ++|+++.+|+++|.++..
T Consensus 120 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~LG~l~~~~~~~~~A~~~y~~A~~-l~P~~~~~~~~Lg~~~~~ 198 (497)
T d1ya0a1 120 RVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ-LVPSNGQPYNQLAILASS 198 (497)
T ss_dssp -----------------------CCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTBSHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHhCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHH-HCCCchHHHHHHHHHHHH
Confidence 4556788999999999999999999987 4567789999999999999999999999999 999999999999999999
Q ss_pred hhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCC
Q 010932 437 IEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGM 473 (497)
Q Consensus 437 ~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~ 473 (497)
.|++.+|+..|.+||.++|.++.|+.+++.++.+..+
T Consensus 199 ~~~~~~A~~~y~ral~~~~~~~~a~~nL~~~~~~~~~ 235 (497)
T d1ya0a1 199 KGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALE 235 (497)
T ss_dssp TTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999876554
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.94 E-value=1.5e-10 Score=105.81 Aligned_cols=128 Identities=10% Similarity=-0.071 Sum_probs=113.0
Q ss_pred ccccccchhhhhhHHHHHH----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHH
Q 010932 368 KDEEGAENELSFQEWTQQV----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELA 443 (497)
Q Consensus 368 ~~~~~~~~e~a~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A 443 (497)
.....|++++|++.+++++ .++..+..+|..+...|++++|+..|+++++ ++|++..++.+++.++...+..+++
T Consensus 5 ~aL~~G~l~eAl~~l~~al~~~P~d~~ar~~La~lL~~~G~~e~A~~~l~~a~~-l~P~~~~~~~~l~~ll~a~~~~~~a 83 (264)
T d1zbpa1 5 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIK-LFPEYLPGASQLRHLVKAAQARKDF 83 (264)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-hCCCcHHHHHHHHHHHHhccccHHH
Confidence 3456789999999999998 7889999999999999999999999999999 9999999999999999998988888
Q ss_pred HHHHHHHHH-hCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccccccCCC
Q 010932 444 LRDAMQAQV-CLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKKQNSWR 496 (497)
Q Consensus 444 ~~~~~~al~-l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~~~~~~ 496 (497)
...+.++.. .+|+...+++.++.++...|++++|.+.++++.++.|..+..|+
T Consensus 84 ~~~~~~~~~~~~p~~~~~~l~~a~~~~~~gd~~~A~~~~~~a~e~~p~~~~~~~ 137 (264)
T d1zbpa1 84 AQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEKGFLAN 137 (264)
T ss_dssp TTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCCEEET
T ss_pred HHHhhhhhcccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCCcccc
Confidence 877766544 36777888899999999999999999999999999999887765
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.77 E-value=2.9e-09 Score=97.04 Aligned_cols=91 Identities=12% Similarity=0.028 Sum_probs=82.9
Q ss_pred HhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChH
Q 010932 396 GDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMET 475 (497)
Q Consensus 396 g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~ 475 (497)
+..+++.|++++|+..|+++|+ .+|+++.++.++|.+|..+|++++|+..|+++++++|++..++..++.++...+..+
T Consensus 3 ~~~aL~~G~l~eAl~~l~~al~-~~P~d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~~~l~~ll~a~~~~~ 81 (264)
T d1zbpa1 3 WKNALSEGQLQQALELLIEAIK-ASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQARK 81 (264)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHH-TCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhccccH
Confidence 5668899999999999999999 999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHhhcC
Q 010932 476 DAQDMLNDGASF 487 (497)
Q Consensus 476 ~A~~~~~~a~~l 487 (497)
++...+.++..+
T Consensus 82 ~a~~~~~~~~~~ 93 (264)
T d1zbpa1 82 DFAQGAATAKVL 93 (264)
T ss_dssp HHTTSCCCEECC
T ss_pred HHHHHhhhhhcc
Confidence 776665554443
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.75 E-value=1.3e-08 Score=95.95 Aligned_cols=129 Identities=10% Similarity=-0.044 Sum_probs=107.2
Q ss_pred HHHHhccccccccchhhhhhHHHHHH-----------HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc----HH
Q 010932 361 ILLKTGYKDEEGAENELSFQEWTQQV-----------QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS----GT 425 (497)
Q Consensus 361 ~~~~~g~~~~~~~~~e~a~~~~~~~~-----------~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~----~~ 425 (497)
.+...+..+...+.+..+...+.++. ..+..+...|..+...|++++|+..|.+++. ..+.+ ..
T Consensus 174 ~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~~~~ 252 (366)
T d1hz4a_ 174 CLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAK-PEFANNHFLQG 252 (366)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCC-CCCTTCGGGHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccCchHHHHHHHHHHHHHhcccHHHHHHHHHHHHH-hccccchHHHH
Confidence 34445555566667777777776655 3456678889999999999999999999999 76654 46
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHHHh------CCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCccc
Q 010932 426 VFVRRALSYLMIEQAELALRDAMQAQVC------LPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAK 490 (497)
Q Consensus 426 ~~~~~g~~~~~~~~~~~A~~~~~~al~l------~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~ 490 (497)
.+.++|.++..+|++++|+..+++++.+ .|....+++.+|.+|..+|++++|++.|++|+++.+.
T Consensus 253 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~Al~l~~~ 323 (366)
T d1hz4a_ 253 QWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLANR 323 (366)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcccChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhh
Confidence 7889999999999999999999999854 5667899999999999999999999999999988654
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.72 E-value=1.9e-08 Score=85.90 Aligned_cols=97 Identities=9% Similarity=0.005 Sum_probs=86.5
Q ss_pred HHHHHhccccccccchhhhhhHHHHHH--------------------------HHHHHHHHHHhHHhhcccHHHHHHHHH
Q 010932 360 DILLKTGYKDEEGAENELSFQEWTQQV--------------------------QDMLNTKKFGDIAFRDKDFKNAIEYYS 413 (497)
Q Consensus 360 ~~~~~~g~~~~~~~~~e~a~~~~~~~~--------------------------~~~~~~~~~g~~~~~~~~~~~Ai~~~~ 413 (497)
+.+...|......|.+++|++.|++++ ....++.++|..+...|++++|+.+++
T Consensus 12 ~~~~~~g~~~~~~g~~e~A~~~~~~AL~l~rG~~l~~~~~~~w~~~~r~~l~~~~~~a~~~la~~~~~~g~~~~Al~~~~ 91 (179)
T d2ff4a2 12 VAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELE 91 (179)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHH
Confidence 556778888888999999999988887 244678899999999999999999999
Q ss_pred HHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHH-------HHhCCCC
Q 010932 414 KLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQA-------QVCLPEW 457 (497)
Q Consensus 414 ~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a-------l~l~p~~ 457 (497)
++++ ++|.+..+|.+++.+|..+|++.+|+..|+++ +.++|..
T Consensus 92 ~al~-~~P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~~ 141 (179)
T d2ff4a2 92 ALTF-EHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGP 141 (179)
T ss_dssp HHHH-HSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCH
T ss_pred HHHH-hCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcCH
Confidence 9999 99999999999999999999999999999998 4467763
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.71 E-value=3.3e-08 Score=92.96 Aligned_cols=105 Identities=10% Similarity=-0.069 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCc-----HHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCC---
Q 010932 386 VQDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPS-----GTVFVRRALSYLMIEQAELALRDAMQAQVCLPEW--- 457 (497)
Q Consensus 386 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~-----~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~--- 457 (497)
--.++...-+|.+++..|++++|+..|++|++ ..|++ ..++.++|.++..+|++++|+..|++++++.|..
T Consensus 9 ~~~ae~~~lrA~~~~~~g~~~~A~~~~~~aL~-~~~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 87 (366)
T d1hz4a_ 9 TMHAEFNALRAQVAINDGNPDEAERLAKLALE-ELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVW 87 (366)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-TCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred chhHHHHHHHHHHHHHCCCHHHHHHHHHHHHh-hCcCCCcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcch
Confidence 34566777789999999999999999999999 88886 3589999999999999999999999999986543
Q ss_pred ---hHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccc
Q 010932 458 ---PTAFYMQALALNKLGMETDAQDMLNDGASFEAKK 491 (497)
Q Consensus 458 ---~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~ 491 (497)
..+++++|.++...|++..|...+.+|+.+.+..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~ 124 (366)
T d1hz4a_ 88 HYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQ 124 (366)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhc
Confidence 5788999999999999999999999999876543
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.64 E-value=9.5e-08 Score=89.18 Aligned_cols=130 Identities=12% Similarity=0.067 Sum_probs=112.7
Q ss_pred HHHHhccccccccchhhhhhHHHHHH-----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHH-
Q 010932 361 ILLKTGYKDEEGAENELSFQEWTQQV-----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSY- 434 (497)
Q Consensus 361 ~~~~~g~~~~~~~~~e~a~~~~~~~~-----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~- 434 (497)
.+...+......+..+.|...|++++ .....|...+....+.|+++.|...|.+|++ ..|.+...|...|...
T Consensus 101 l~~~ya~~~~~~~~~~~a~~i~~~~l~~~~~~~~~~w~~~~~~~~~~~~~~~ar~i~~~al~-~~~~~~~~~~~~a~~e~ 179 (308)
T d2onda1 101 LYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARE-DARTRHHVYVTAALMEY 179 (308)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHT-STTCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHcCChHHHHHHHHHHHH-hCCCcHHHHHHHHHHHH
Confidence 34444445566788999999999988 2244677888999999999999999999999 9999999999999875
Q ss_pred HhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCChHHHHHHHHHhhcCcccc
Q 010932 435 LMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGMETDAQDMLNDGASFEAKK 491 (497)
Q Consensus 435 ~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a~~l~~~~ 491 (497)
...|+.+.|...|+++++..|+++..|...+..+...|++++|...|++|++..|..
T Consensus 180 ~~~~~~~~a~~i~e~~l~~~p~~~~~w~~y~~~~~~~g~~~~aR~~fe~ai~~~~~~ 236 (308)
T d2onda1 180 YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLP 236 (308)
T ss_dssp HTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSC
T ss_pred HhccCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Confidence 456899999999999999999999999999999999999999999999999976643
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.57 E-value=1.6e-07 Score=73.14 Aligned_cols=79 Identities=5% Similarity=-0.046 Sum_probs=65.0
Q ss_pred HHHHHHhHHh---hcccHHHHHHHHHHHhhcCCCCcH-HHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 010932 391 NTKKFGDIAF---RDKDFKNAIEYYSKLVSMMSVPSG-TVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQAL 466 (497)
Q Consensus 391 ~~~~~g~~~~---~~~~~~~Ai~~~~~ai~~~~p~~~-~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 466 (497)
.-|+.|..+. ...+.++||..+++++. .+|.+. +++|++|.+|+++|+|++|+..++++|+++|++.+|...+-.
T Consensus 37 t~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~-~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~~L~~~ 115 (124)
T d2pqrb1 37 SRFNYAWGLIKSTDVNDERLGVKILTDIYK-EAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 115 (124)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHH-HCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHcCCcHHHHHHHHHHHHHHHh-cCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHHHHHHH
Confidence 4455555555 33577899999999999 888764 899999999999999999999999999999999998877766
Q ss_pred HHHH
Q 010932 467 ALNK 470 (497)
Q Consensus 467 ~~~~ 470 (497)
+-.+
T Consensus 116 Ie~~ 119 (124)
T d2pqrb1 116 VEDK 119 (124)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.56 E-value=1.8e-07 Score=87.31 Aligned_cols=130 Identities=10% Similarity=0.019 Sum_probs=110.7
Q ss_pred hccccccccchhhhhhHHHHHH-----HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcH-HHHHHHHHHHHhhh
Q 010932 365 TGYKDEEGAENELSFQEWTQQV-----QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSG-TVFVRRALSYLMIE 438 (497)
Q Consensus 365 ~g~~~~~~~~~e~a~~~~~~~~-----~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~-~~~~~~g~~~~~~~ 438 (497)
.|......+..+.+...|.+++ .+...|...+......|+++.|...|+++++ ..|.+. .+|...+....+.|
T Consensus 70 ~~~~~~~~~~~~~a~~i~~ral~~~~p~~~~l~~~ya~~~~~~~~~~~a~~i~~~~l~-~~~~~~~~~w~~~~~~~~~~~ 148 (308)
T d2onda1 70 KGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLA-IEDIDPTLVYIQYMKFARRAE 148 (308)
T ss_dssp TSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT-SSSSCTHHHHHHHHHHHHHHH
T ss_pred HHHHhhcccchHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHH-HhcCChHHHHHHHHHHHHHcC
Confidence 3334444455677778888877 2355678889999999999999999999999 888775 57999999999999
Q ss_pred cHHHHHHHHHHHHHhCCCChHHHHHHHHHH-HHCCChHHHHHHHHHhhcCccccccCC
Q 010932 439 QAELALRDAMQAQVCLPEWPTAFYMQALAL-NKLGMETDAQDMLNDGASFEAKKQNSW 495 (497)
Q Consensus 439 ~~~~A~~~~~~al~l~p~~~~a~~~~g~~~-~~~~~~~~A~~~~~~a~~l~~~~~~~~ 495 (497)
+++.|.+.|++|++..|.....|...|... ...|+.+.|...|++|++..|.+...|
T Consensus 149 ~~~~ar~i~~~al~~~~~~~~~~~~~a~~e~~~~~~~~~a~~i~e~~l~~~p~~~~~w 206 (308)
T d2onda1 149 GIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYV 206 (308)
T ss_dssp CHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred ChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhhhhhHHHH
Confidence 999999999999999999999999999865 456899999999999999999888776
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.55 E-value=5.6e-08 Score=75.76 Aligned_cols=83 Identities=10% Similarity=0.008 Sum_probs=70.1
Q ss_pred HHHHHhhcCCCCcHHHHHHHHHHHHh---hhcHHHHHHHHHHHHHhCCCCh-HHHHHHHHHHHHCCChHHHHHHHHHhhc
Q 010932 411 YYSKLVSMMSVPSGTVFVRRALSYLM---IEQAELALRDAMQAQVCLPEWP-TAFYMQALALNKLGMETDAQDMLNDGAS 486 (497)
Q Consensus 411 ~~~~ai~~~~p~~~~~~~~~g~~~~~---~~~~~~A~~~~~~al~l~p~~~-~a~~~~g~~~~~~~~~~~A~~~~~~a~~ 486 (497)
-|.+..+ -.+. ....|+.|.|+.+ .++.++||..++++++.+|... +++|++|.+|+++|+|++|+.+++++++
T Consensus 24 q~~~e~~-~~~s-~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ 101 (124)
T d2pqrb1 24 QVVSEGG-PTAT-IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFE 101 (124)
T ss_dssp HHHHTTG-GGSC-HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHhC-CCCC-cchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHc
Confidence 3344433 3344 7899999999985 4677899999999999999875 8999999999999999999999999999
Q ss_pred CccccccCC
Q 010932 487 FEAKKQNSW 495 (497)
Q Consensus 487 l~~~~~~~~ 495 (497)
++|++..++
T Consensus 102 ieP~n~qA~ 110 (124)
T d2pqrb1 102 HERNNKQVG 110 (124)
T ss_dssp HCTTCHHHH
T ss_pred cCCCcHHHH
Confidence 999987764
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.54 E-value=1e-07 Score=86.70 Aligned_cols=137 Identities=10% Similarity=-0.001 Sum_probs=91.6
Q ss_pred cccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCC-CCcceeeeeeeeeCCceEEEEEcCCCC
Q 010932 65 LIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDERLLVAQYMPND 143 (497)
Q Consensus 65 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~ 143 (497)
++++..+.++.+.||+... ++..++||+...........+.+|...+..+. +--+.+++.+...++..++||++++|.
T Consensus 17 ~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~ 95 (263)
T d1j7la_ 17 RCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGV 95 (263)
T ss_dssp EEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSE
T ss_pred EEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecccc
Confidence 4555545555678998875 45667889887655445556888988887764 333677788888888899999999998
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc---------------------------------------------
Q 010932 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNS--------------------------------------------- 178 (497)
Q Consensus 144 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~lh~--------------------------------------------- 178 (497)
++...... ... ...++.+++..|..||+
T Consensus 96 ~~~~~~~~----~~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
T d1j7la_ 96 LCSEEYED----EQS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPR 168 (263)
T ss_dssp EHHHHTTT----CSC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHH
T ss_pred cccccccc----ccc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHH
Confidence 87654421 111 11223333333333332
Q ss_pred --------C-----CCcccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 179 --------Q-----NRKLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 179 --------~-----~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
. ..++|+|+.|.|||+++++.+-|+||+.+.
T Consensus 169 ~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T d1j7la_ 169 ELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence 0 016899999999999977767799999765
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=98.49 E-value=5.3e-07 Score=72.66 Aligned_cols=111 Identities=11% Similarity=0.041 Sum_probs=92.9
Q ss_pred cchhhhhhHHHHHH--HHHHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHh----hhcHHHHHHH
Q 010932 373 AENELSFQEWTQQV--QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLM----IEQAELALRD 446 (497)
Q Consensus 373 ~~~e~a~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~----~~~~~~A~~~ 446 (497)
.++++|+..|+++. .++.+.+.+|. ....++++|+..|++|.+ ..++.+.+++|..|.. ..++++|+..
T Consensus 7 kd~~~A~~~~~kaa~~g~~~a~~~l~~--~~~~~~~~a~~~~~~aa~---~g~~~a~~~Lg~~y~~g~~~~~d~~~A~~~ 81 (133)
T d1klxa_ 7 KDLKKAIQYYVKACELNEMFGCLSLVS--NSQINKQKLFQYLSKACE---LNSGNGCRFLGDFYENGKYVKKDLRKAAQY 81 (133)
T ss_dssp HHHHHHHHHHHHHHHTTCTTHHHHHHT--CTTSCHHHHHHHHHHHHH---TTCHHHHHHHHHHHHHCSSSCCCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCChhhhhhhcc--ccccCHHHHHHHHhhhhc---ccchhhhhhHHHhhhhccccchhhHHHHHH
Confidence 35678888888877 45566677765 345789999999999999 4679999999999986 5679999999
Q ss_pred HHHHHHhCCCChHHHHHHHHHHHH----CCChHHHHHHHHHhhcCccc
Q 010932 447 AMQAQVCLPEWPTAFYMQALALNK----LGMETDAQDMLNDGASFEAK 490 (497)
Q Consensus 447 ~~~al~l~p~~~~a~~~~g~~~~~----~~~~~~A~~~~~~a~~l~~~ 490 (497)
|++|.+. .++.+.+++|.+|.. ..++++|++.|++|.++...
T Consensus 82 ~~~aa~~--g~~~a~~~Lg~~y~~G~gv~~d~~~A~~~~~~Aa~~G~~ 127 (133)
T d1klxa_ 82 YSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGSE 127 (133)
T ss_dssp HHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCH
T ss_pred Hhhhhcc--CcchHHHHHHHHHHcCCccCCCHHHHHHHHHHHHHCCCH
Confidence 9999876 678999999999988 57999999999999987543
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=98.23 E-value=4.4e-06 Score=75.43 Aligned_cols=94 Identities=12% Similarity=0.136 Sum_probs=46.8
Q ss_pred HHHHHHHHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHh----hhcHHHHHHHHHHHHHhCCCChHHHHHH
Q 010932 389 MLNTKKFGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLM----IEQAELALRDAMQAQVCLPEWPTAFYMQ 464 (497)
Q Consensus 389 ~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~~ 464 (497)
+.+++++|..++..|||++|+..|++|.+ . .++.+++++|.+|.. ..++..|+..+.++... .++.+.+.+
T Consensus 2 p~~~~~lG~~~~~~~d~~~A~~~~~kAa~-~--g~~~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~--~~~~a~~~l 76 (265)
T d1ouva_ 2 PKELVGLGAKSYKEKDFTQAKKYFEKACD-L--KENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL--NYSNGCHLL 76 (265)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHH-C--CCHHHHHHHHHHHHcCCCcchhHHHHHHhhcccccc--cccchhhcc
Confidence 44555555555555555555555555555 2 344555555555554 34555555555554432 244455555
Q ss_pred HHHHHH----CCChHHHHHHHHHhhcC
Q 010932 465 ALALNK----LGMETDAQDMLNDGASF 487 (497)
Q Consensus 465 g~~~~~----~~~~~~A~~~~~~a~~l 487 (497)
|.++.. ..+.++|...|++|...
T Consensus 77 ~~~~~~~~~~~~~~~~a~~~~~~a~~~ 103 (265)
T d1ouva_ 77 GNLYYSGQGVSQNTNKALQYYSKACDL 103 (265)
T ss_dssp HHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred ccccccccccchhhHHHHHHHhhhhhh
Confidence 554443 34445555555555443
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.19 E-value=4.6e-06 Score=74.90 Aligned_cols=70 Identities=16% Similarity=0.184 Sum_probs=52.0
Q ss_pred CcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCC--CcceeeeeeeeeCCceEEEEEcCCCCChhh
Q 010932 75 PNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRH--KRLVNLIGCCAEGDERLLVAQYMPNDTLSK 147 (497)
Q Consensus 75 ~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 147 (497)
-+.||+....++..+++|.-..... ..+..|+..|+.+.. -.+.+++.+..+++..++||++++|.++.+
T Consensus 24 ~~~v~r~~~~~~~~~vlK~~~~~~~---~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~~ 95 (255)
T d1nd4a_ 24 DAAVFRLSAQGRPVLFVKTDLSGAL---NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS 95 (255)
T ss_dssp SCEEEEEECTTSCCEEEEEECSCTT---SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETTT
T ss_pred CCeEEEEEeCCCCEEEEEeCCccCH---hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccccc
Confidence 3679999987788899998765432 347778888776642 336677888888888899999998876543
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=98.10 E-value=8.8e-06 Score=73.34 Aligned_cols=114 Identities=17% Similarity=0.123 Sum_probs=94.9
Q ss_pred ccchhhhhhHHHHHH--HHHHHHHHHHhHHhh----cccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHh----hhcHH
Q 010932 372 GAENELSFQEWTQQV--QDMLNTKKFGDIAFR----DKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLM----IEQAE 441 (497)
Q Consensus 372 ~~~~e~a~~~~~~~~--~~~~~~~~~g~~~~~----~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~----~~~~~ 441 (497)
....+.++..+.... .+...++.+|..+.. ..+...+...++.+.+ +.++.+.+++|.+|.. ..+++
T Consensus 123 ~~~~~~a~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~a~~---~g~~~A~~~lg~~y~~g~~~~~d~~ 199 (265)
T d1ouva_ 123 TRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACD---LKDSPGCFNAGNMYHHGEGATKNFK 199 (265)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH---TTCHHHHHHHHHHHHHTCSSCCCHH
T ss_pred cchhHHHHHHhhhhhcccccchhhhhhhhhccCCCcccccccchhhhhcccc---ccccccccchhhhcccCcccccchh
Confidence 444556666666655 467778888988875 5688899999999998 5679999999999998 67999
Q ss_pred HHHHHHHHHHHhCCCChHHHHHHHHHHHH----CCChHHHHHHHHHhhcCccc
Q 010932 442 LALRDAMQAQVCLPEWPTAFYMQALALNK----LGMETDAQDMLNDGASFEAK 490 (497)
Q Consensus 442 ~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~~~~~~A~~~~~~a~~l~~~ 490 (497)
+|+..|++|.+. +++.+++++|.+|.. .+++++|++.|++|..+..+
T Consensus 200 ~A~~~~~~aa~~--g~~~a~~~LG~~y~~G~g~~~n~~~A~~~~~kAa~~g~~ 250 (265)
T d1ouva_ 200 EALARYSKACEL--ENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAK 250 (265)
T ss_dssp HHHHHHHHHHHT--TCHHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCH
T ss_pred hhhhhHhhhhcc--cCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHCcCH
Confidence 999999999988 579999999999987 55899999999999877654
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.92 E-value=2.5e-05 Score=74.83 Aligned_cols=76 Identities=16% Similarity=0.083 Sum_probs=49.6
Q ss_pred cccCCCCCCcEEEEEEEcC-CcEEEEEEccC----C---CCCChhHHHHHHHHhccCC-C--CcceeeeeeeeeCCceEE
Q 010932 67 VSESGDKAPNVVYRGRLKN-NRLVAIKRFSR----Q---SWPDPHQFVTEAAGLGNVR-H--KRLVNLIGCCAEGDERLL 135 (497)
Q Consensus 67 ~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~----~---~~~~~~~~~~e~~~l~~l~-h--~niv~~~~~~~~~~~~~l 135 (497)
++.+|.|....||++...+ ++.|+||.-.. . -.....+...|...|+.+. + ..+++++.+ +....++
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l 108 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 108 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence 4578999999999998654 77899996432 1 1123456677888887662 2 345555544 4456689
Q ss_pred EEEcCCCCC
Q 010932 136 VAQYMPNDT 144 (497)
Q Consensus 136 v~e~~~~~~ 144 (497)
|||++.+..
T Consensus 109 vmE~L~~~~ 117 (392)
T d2pula1 109 VMEDLSHLK 117 (392)
T ss_dssp EECCCTTSE
T ss_pred EEeccCCcc
Confidence 999997644
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=97.28 E-value=0.00067 Score=62.75 Aligned_cols=98 Identities=11% Similarity=0.084 Sum_probs=58.6
Q ss_pred cccccCHHHHHHHhcCC--CcccccccCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcce-
Q 010932 45 AFKEFVLADLRAATNGF--SSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLV- 121 (497)
Q Consensus 45 ~~~~~~~~~~~~~~~~~--~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv- 121 (497)
++..++.+.+..+...+ .....+..|+ +.--.||++...+|..|++|+.+.... ..+++..|...|..|...+|.
T Consensus 4 ~f~~L~pd~i~~al~~~g~~~~~~~~~L~-s~EN~vy~v~~~dg~~~VlK~~rp~~~-s~~~i~~E~~~l~~L~~~gipv 81 (325)
T d1zyla1 4 TFQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPV 81 (325)
T ss_dssp CCCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSB
T ss_pred CccccCHHHHHHHHHHcCCCCCcCccccc-cccceeEEEEcCCCCEEEEEEeCCCCC-CHHHHHHHHHHHHHHHhcCCCC
Confidence 34455666665555433 2111122233 223589999998999999999875432 457788899888877432221
Q ss_pred -eee-----eeeeeCCceEEEEEcCCCCC
Q 010932 122 -NLI-----GCCAEGDERLLVAQYMPNDT 144 (497)
Q Consensus 122 -~~~-----~~~~~~~~~~lv~e~~~~~~ 144 (497)
..+ ..+......+.++++++|..
T Consensus 82 ~~p~~~~g~~~~~~~~~~~~l~~~~~G~~ 110 (325)
T d1zyla1 82 AAPVAFNGQTLLNHQGFYFAVFPSVGGRQ 110 (325)
T ss_dssp CCCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred CCceecCCCeeeeeeeEEEEEEeecCCcC
Confidence 111 12344556788999987643
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.23 E-value=0.00069 Score=53.52 Aligned_cols=82 Identities=17% Similarity=0.180 Sum_probs=70.1
Q ss_pred ccchhhhhhHHHHHH--HHHHHHHHHHhHHhh----cccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHh----hhcHH
Q 010932 372 GAENELSFQEWTQQV--QDMLNTKKFGDIAFR----DKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLM----IEQAE 441 (497)
Q Consensus 372 ~~~~e~a~~~~~~~~--~~~~~~~~~g~~~~~----~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~----~~~~~ 441 (497)
..+.++|++.|+++. .++.+.+.+|..++. ..|+++|+..|++|.+ . .++.+.+++|.+|.. ..+++
T Consensus 36 ~~~~~~a~~~~~~aa~~g~~~a~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~-~--g~~~a~~~Lg~~y~~G~gv~~d~~ 112 (133)
T d1klxa_ 36 QINKQKLFQYLSKACELNSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACG-L--NDQDGCLILGYKQYAGKGVVKNEK 112 (133)
T ss_dssp TSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHTSSSCCCHH
T ss_pred ccCHHHHHHHHhhhhcccchhhhhhHHHhhhhccccchhhHHHHHHHhhhhc-c--CcchHHHHHHHHHHcCCccCCCHH
Confidence 356788899999877 678889999998875 5689999999999999 4 568999999999987 56899
Q ss_pred HHHHHHHHHHHhCCC
Q 010932 442 LALRDAMQAQVCLPE 456 (497)
Q Consensus 442 ~A~~~~~~al~l~p~ 456 (497)
+|+..|++|.++...
T Consensus 113 ~A~~~~~~Aa~~G~~ 127 (133)
T d1klxa_ 113 QAVKTFEKACRLGSE 127 (133)
T ss_dssp HHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHCCCH
Confidence 999999999987543
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.98 E-value=0.001 Score=63.21 Aligned_cols=74 Identities=16% Similarity=0.225 Sum_probs=51.9
Q ss_pred ccccCCCCCCcEEEEEEEcC--------CcEEEEEEccCCCCCChhHHHHHHHHhccCC-CCcceeeeeeeeeCCceEEE
Q 010932 66 IVSESGDKAPNVVYRGRLKN--------NRLVAIKRFSRQSWPDPHQFVTEAAGLGNVR-HKRLVNLIGCCAEGDERLLV 136 (497)
Q Consensus 66 ~~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv 136 (497)
-+..++.|-.-.+|++...+ ++.|.+++.... .......+|..+++.+. +.-..++++++.+ .+|
T Consensus 46 ~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~--~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I 119 (395)
T d1nw1a_ 46 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRL 119 (395)
T ss_dssp EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEE
T ss_pred EEEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCc--chhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceE
Confidence 35678888999999998653 356778876532 23345668888888874 4334577777753 689
Q ss_pred EEcCCCCCh
Q 010932 137 AQYMPNDTL 145 (497)
Q Consensus 137 ~e~~~~~~L 145 (497)
+||++|.+|
T Consensus 120 ~efi~g~~l 128 (395)
T d1nw1a_ 120 EEYIPSRPL 128 (395)
T ss_dssp ECCCCEEEC
T ss_pred EEEeccccC
Confidence 999987654
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.94 E-value=0.00063 Score=62.58 Aligned_cols=157 Identities=11% Similarity=0.028 Sum_probs=84.7
Q ss_pred cCHHHHHHHhcCCCcccccc--cCCCCCCcEEEEEEEcCCcEEEEEEccCCCCCChhHHHHHHHHhccCCCCcc-----e
Q 010932 49 FVLADLRAATNGFSSELIVS--ESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRL-----V 121 (497)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~--~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-----v 121 (497)
.+.+|+......|+-..+.+ .+..|.--+.|+....+|+ +++|++.... ..+.+..|+.++..+...++ +
T Consensus 3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g~-yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~pi 79 (316)
T d2ppqa1 3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDP-LILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 79 (316)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCC-EEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCCc-EEEEEcCCCC--CHHHHHHHHHHHHhhhhccccccccc
Confidence 46678888887776544443 3567777889999886665 8899986532 33456667777776643222 1
Q ss_pred eee-e--eeeeCCceEEEEEcCCCCChhhhh--------------hcC------C-CCCCC------------------H
Q 010932 122 NLI-G--CCAEGDERLLVAQYMPNDTLSKHL--------------FHW------D-KQPLP------------------W 159 (497)
Q Consensus 122 ~~~-~--~~~~~~~~~lv~e~~~~~~L~~~l--------------~~~------~-~~~l~------------------~ 159 (497)
... | +.........++.++.+......- +.. . ..... .
T Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (316)
T d2ppqa1 80 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 159 (316)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred eecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcc
Confidence 111 1 112234456667766553321100 000 0 00000 0
Q ss_pred HHHHHHHHHHHHHHHHHHc----CCCcccccCCCcceEeCCCCCeeEcccCCcc
Q 010932 160 EMRVRVAYYIAQALDHCNS----QNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK 209 (497)
Q Consensus 160 ~~~~~i~~~i~~~L~~lh~----~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 209 (497)
......+..+...+.-.+. .| +||+|+.+.||+++.+...-|.||+.+.
T Consensus 160 ~~~~~~l~~~~~~~~~~~~~~L~~g-iIHgDl~~dNvl~~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 160 KGLREEIRPEIDYLAAHWPKDLPAG-VIHADLFQDNVFFLGDELSGLIDFYFAC 212 (316)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEE-EECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhHHHHHHHHHHhhhccCccccccc-cccCCcchhhhhcccccceeEecccccc
Confidence 0111122222333333322 24 8999999999999988877899999865
|
| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=84.59 E-value=0.7 Score=31.37 Aligned_cols=31 Identities=13% Similarity=0.119 Sum_probs=25.1
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhh
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVS 417 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~ 417 (497)
+-|=.+-.+|+.+.+.|+|++||+++++|..
T Consensus 6 N~AH~~~RrAer~l~~~rydeAIech~kA~~ 36 (83)
T d2crba1 6 NLAHQQSRRADRLLAAGKYEEAISCHRKATT 36 (83)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4445566788999999999999999988776
|
| >d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Hypothetical protein 1500032H18Rik species: Mouse (Mus musculus) [TaxId: 10090]
Probab=84.01 E-value=0.6 Score=33.20 Aligned_cols=31 Identities=10% Similarity=0.088 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhHHhhcccHHHHHHHHHHHhh
Q 010932 387 QDMLNTKKFGDIAFRDKDFKNAIEYYSKLVS 417 (497)
Q Consensus 387 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~ai~ 417 (497)
..+..+..+|..+-..|+|++|+.+|.+||+
T Consensus 13 ~~A~~l~~~Av~~D~~g~y~eA~~~Y~~aie 43 (93)
T d1wfda_ 13 TAAVAVLKRAVELDAESRYQQALVCYQEGID 43 (93)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4556777888888889999999999998887
|
| >d1qsaa1 a.118.5.1 (A:1-450) 70 KDa soluble lytic transglycosylase (SLT70), superhelical domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Bacterial muramidases family: Bacterial muramidases domain: 70 KDa soluble lytic transglycosylase (SLT70), superhelical domain species: Escherichia coli [TaxId: 562]
Probab=80.91 E-value=3 Score=38.84 Aligned_cols=90 Identities=13% Similarity=-0.007 Sum_probs=62.4
Q ss_pred HHhHHhhcccHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhcHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCCh
Q 010932 395 FGDIAFRDKDFKNAIEYYSKLVSMMSVPSGTVFVRRALSYLMIEQAELALRDAMQAQVCLPEWPTAFYMQALALNKLGME 474 (497)
Q Consensus 395 ~g~~~~~~~~~~~Ai~~~~~ai~~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~ 474 (497)
.+..+...+..+.|......... ...+.....-..+. .+..+++..+...+...-.-....+.+.|-+|.++..+|+.
T Consensus 258 ~a~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~~w~~~~-al~~~~~~~~~~~~~~l~~~~~~~~r~~YW~gRa~~~~G~~ 335 (450)
T d1qsaa1 258 VAWRLMGNDVTDEQAKWRDDAIM-RSQSTSLIERRVRM-ALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGRE 335 (450)
T ss_dssp HHHTSCSTTCCHHHHHHHHHHHH-TCCCHHHHHHHHHH-HHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHcCchHHHHHHHHhhcc-cccchHHHHHHHHH-HHHcCChHHHHHHHHhcCcccccHHHHHHHHHHHHHHcCCh
Confidence 33444556777888888877776 54443333333344 45568888888877654332233478889999999999999
Q ss_pred HHHHHHHHHhhc
Q 010932 475 TDAQDMLNDGAS 486 (497)
Q Consensus 475 ~~A~~~~~~a~~ 486 (497)
++|...|..+..
T Consensus 336 ~~A~~~~~~~a~ 347 (450)
T d1qsaa1 336 AEAKEILHQLMQ 347 (450)
T ss_dssp HHHHHHHHHHHT
T ss_pred hhHHHHHHHHhc
Confidence 999999998764
|