Citrus Sinensis ID: 011012

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-----

MAMDFDDFLHLDFSGYSSTTTTTTTGDDYACNWNDWSPVVDWEALSGGQDDFHDLIESMMDDSGLNPNARVANIAHEPCNSVSTETSSSSMAVDEETNGEDFKGLRLVHLLMAAAEALTGVNKSRELAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLEGAGGVHGNNKHYTSNGPHHRDDHHHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVANDRRVHIVDYDIMEGIQWASLMQALVSRKDGPPAPHLRITALSRGGSGRRSISTVQETGRRLVAFAASIGQPFSFHQCRLDSDETFKASALKLVRGEALIINCMLHLPHFSYRAPDSIASFLSGAKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSRARALVERVFLGPRISGSLARIYRTCGEEEVYSWGDWLGVVGFKPVNISFANHCQAKLLLGLFNDGYRVEELANNRLVLGWKSRRLLSASVWTSSFDSNL

ccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHcccccccccEEEEEECcccccccccHHHHHHHHHHHHHHHHHccccEEEEEEEccccccccccccccccccEEEEEEcccccccccccccHHHHHHHHHHHccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHcccccccccHHHHHHHHHHHcccccccEEEEEcccEEEEEEcccEEEEEEEccccccccc

****FDDFLHLDFS*************************VDWEALSGGQDDFHDLI*********************************************FKGLRLVHLLMAAAEALTGVNKSRELAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLEGAGGVHGNNKH************HHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVANDRRVHIVDYDIMEGIQWASLMQALVSRKDGPPAPHLRITALSRGGSGRRSISTVQETGRRLVAFAASIGQPFSFHQCRLDSDETFKASALKLVRGEALIINCMLHLPHFSYRAPDSIASFLSGAKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSRARALVERVFLGPRISGSLARIYRTCGEEEVYSWGDWLGVVGFKPVNISFANHCQAKLLLGLFNDGYRVEELANNRLVLGWKSRRLLSASVWTSSF****

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Scarecrow-like protein 26	Probable transcription factor involved in plant development.	probable	Q9SUF5
Nodulation-signaling pathway 2 protein	Transcriptional regulator essential for Nod-factor-induced gene expression. Acts downstream of calcium spiking and DMI3, a calcium/calmodulin-dependent protein kinase (CCaMK).	probable	Q5NE24

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4A6D, chain A
Confidence level:probable
Coverage over the Query: 213-362
View the alignment between query and template
View the model in PyMOL

Template: 3UJC, chain A
Confidence level:probable
Coverage over the Query: 193-357
View the alignment between query and template
View the model in PyMOL