Citrus Sinensis ID: 011049
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 494 | 2.2.26 [Sep-21-2011] | |||||||
| Q8VZF3 | 960 | Probable glutamyl endopep | yes | no | 0.989 | 0.509 | 0.746 | 0.0 | |
| Q10MJ1 | 938 | Probable glutamyl endopep | yes | no | 0.983 | 0.518 | 0.735 | 0.0 | |
| P39839 | 657 | Uncharacterized peptidase | yes | no | 0.441 | 0.331 | 0.266 | 2e-09 | |
| P34422 | 740 | Dipeptidyl peptidase fami | yes | no | 0.305 | 0.204 | 0.291 | 6e-09 | |
| P13676 | 732 | Acylamino-acid-releasing | yes | no | 0.317 | 0.214 | 0.274 | 1e-08 | |
| Q8R146 | 732 | Acylamino-acid-releasing | yes | no | 0.319 | 0.215 | 0.247 | 2e-08 | |
| P80227 | 730 | Acylamino-acid-releasing | yes | no | 0.301 | 0.204 | 0.288 | 6e-08 | |
| P19205 | 732 | Acylamino-acid-releasing | yes | no | 0.287 | 0.193 | 0.253 | 2e-07 | |
| P14740 | 767 | Dipeptidyl peptidase 4 OS | no | no | 0.495 | 0.319 | 0.264 | 6e-07 | |
| P13798 | 732 | Acylamino-acid-releasing | yes | no | 0.319 | 0.215 | 0.252 | 1e-06 |
| >sp|Q8VZF3|CGEP_ARATH Probable glutamyl endopeptidase, chloroplastic OS=Arabidopsis thaliana GN=GEP PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/489 (74%), Positives = 423/489 (86%)
Query: 2 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY 61
E QD GDA +EVSPRDI+Y Q AEP GE+PE+LHKLDLR+ +SWCDD+LALV E+WY
Sbjct: 430 AETQDGGDAKMEVSPRDIVYMQSAEPLAGEEPEVLHKLDLRYGGISWCDDTLALVYESWY 489
Query: 62 KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 121
KT +TRTW++ PGS DV+PR+LFDR E+VYSDPGS M+ RT GT VIAKIKKENDE
Sbjct: 490 KTRRTRTWVISPGSNDVSPRILFDRSSEDVYSDPGSTMLRRTDAGTYVIAKIKKENDEGT 549
Query: 122 YILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQL 181
Y+LLNG G TP+GN+PFLDLFDINTG+KERIWES++EKYFET VAL+ Q E D+ + +L
Sbjct: 550 YVLLNGSGATPQGNVPFLDLFDINTGNKERIWESDKEKYFETVVALMSDQKEGDLKMEEL 609
Query: 182 KILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATL 241
KILTSKESKTE TQY + WP +K QITNFPHPYP LASLQKEMI+YQRKDGV LTATL
Sbjct: 610 KILTSKESKTENTQYSLQLWPDRKVQQITNFPHPYPQLASLQKEMIRYQRKDGVQLTATL 669
Query: 242 YLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301
YLPPGYD SKDGPLPCLFW+YP ++KSKDAAGQVRGSPNEF+G+ TS+L++LARRFA+L
Sbjct: 670 YLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFAGIGSTSALLWLARRFAIL 729
Query: 302 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL 361
+GP+IPIIGEGD+ NDR+VEQLV+SAEAAVEEVVRRGVAD S+IAVGGHSYGAFMTA+L
Sbjct: 730 SGPTIPIIGEGDEEANDRYVEQLVASAEAAVEEVVRRGVADRSKIAVGGHSYGAFMTANL 789
Query: 362 LAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILII 421
LAHAPHLF CGIARSG+YN+TLTPFGFQ E RTLWEATNVY+EMSP ANKIKKPIL+I
Sbjct: 790 LAHAPHLFACGIARSGAYNRTLTPFGFQNEDRTLWEATNVYVEMSPFMSANKIKKPILLI 849
Query: 422 HGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481
HGE D+ G MQ++RFF+ALKGHGAL RLV+LP E H Y+ARE++MHV+WETDRWLQK
Sbjct: 850 HGEEDNNPGTLTMQSDRFFNALKGHGALCRLVVLPHESHGYSARESIMHVLWETDRWLQK 909
Query: 482 YCLSNTSDG 490
YC+ NTSD
Sbjct: 910 YCVPNTSDA 918
|
Serine-type protease active in vitro against the LHCII N-terminal. Cleaves its substrate on the carboxy-side of Glu residues. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 4EC: .EC: 2EC: 1EC: .EC: - |
| >sp|Q10MJ1|CGEP_ORYSJ Probable glutamyl endopeptidase, chloroplastic OS=Oryza sativa subsp. japonica GN=GEP PE=2 SV=1 | Back alignment and function description |
|---|
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/487 (73%), Positives = 418/487 (85%), Gaps = 1/487 (0%)
Query: 2 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY 61
VE QD GDA VEVSPRDI+Y + AEP GE+PEILHKLDLR+ SWCD+SLALV E+WY
Sbjct: 413 VETQDGGDAKVEVSPRDIVYMENAEPINGEQPEILHKLDLRYAGTSWCDESLALVYESWY 472
Query: 62 KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 121
KT +TRTW++ P KDV+PR+LFDR E+VYSDPGSPM+ RT+ GT VIAK+KK+ DE
Sbjct: 473 KTRKTRTWVISPDKKDVSPRILFDRSSEDVYSDPGSPMLRRTAMGTYVIAKVKKQ-DENT 531
Query: 122 YILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQL 181
YILLNG G TPEGN+PFLDLFDINTGSKERIW+S++EKY+ET VAL+ + + ++ L +L
Sbjct: 532 YILLNGMGATPEGNVPFLDLFDINTGSKERIWQSDKEKYYETVVALMSDKTDGELPLEKL 591
Query: 182 KILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATL 241
KILTSKESKTE TQY++ WP KK QIT+FPHPYP LASL KEMI+YQRKDGV LTATL
Sbjct: 592 KILTSKESKTENTQYYLQIWPEKKQVQITDFPHPYPQLASLYKEMIRYQRKDGVQLTATL 651
Query: 242 YLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301
YLPPGYD S+DGPLPCL W+YP ++KSKDAAGQVRGSPNEF G+ TS L++LAR FA+L
Sbjct: 652 YLPPGYDPSQDGPLPCLVWSYPGEFKSKDAAGQVRGSPNEFPGIGATSPLLWLARGFAIL 711
Query: 302 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL 361
+GP+IPIIGEGD+ NDR+VEQLV+SAEAA EEVVRRGVA P +IAVGGHSYGAFMTA+L
Sbjct: 712 SGPTIPIIGEGDEEANDRYVEQLVTSAEAAAEEVVRRGVAHPDKIAVGGHSYGAFMTANL 771
Query: 362 LAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILII 421
LAHAPHLFCCGIARSG+YN+TLTPFGFQ E RTLWEATN Y+EMSP ANKIKKPIL+I
Sbjct: 772 LAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATNTYVEMSPFMSANKIKKPILLI 831
Query: 422 HGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481
HGE D+ G MQ++RFF+ALKGHGALSRLV+LPFE H Y+ARE++MHV+WETDRWLQK
Sbjct: 832 HGEQDNNSGTLTMQSDRFFNALKGHGALSRLVILPFESHGYSARESIMHVLWETDRWLQK 891
Query: 482 YCLSNTS 488
YCLS +S
Sbjct: 892 YCLSGSS 898
|
Serine-type protease active in vitro against the LHCII N-terminal. Cleaves its substrate on the carboxy-side of Glu residues. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: - |
| >sp|P39839|YUXL_BACSU Uncharacterized peptidase YuxL OS=Bacillus subtilis (strain 168) GN=yuxL PE=3 SV=3 | Back alignment and function description |
|---|
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 30/248 (12%)
Query: 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSG 284
E I+Y +DGV + L P + PL + G P+ G
Sbjct: 402 EEIQYATEDGVMVNGWLMRPAQMEGETTYPLIL----------------NIHGGPHMMYG 445
Query: 285 MTPTSSL-IFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRG- 339
T + A+ +AV+ G G + N + + AV+E ++R
Sbjct: 446 HTYFHEFQVLAAKGYAVVYINPRGSHGYGQEFVNAVRGDYGGKDYDDVMQAVDEAIKRDP 505
Query: 340 VADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLW--- 396
DP R+ V G SYG FMT ++ RS S + F T W
Sbjct: 506 HIDPKRLGVTGGSYGGFMTNWIVGQTNRFKAAVTQRSISNWISFHGVSDIGYFFTDWQLE 565
Query: 397 ----EATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRL 452
E T + SP+ +A ++ P+LI+HGE DD+ + QAE+ F ALK G ++L
Sbjct: 566 HDMFEDTEKLWDRSPLKYAANVETPLLILHGERDDRCPI--EQAEQLFIALKKMGKETKL 623
Query: 453 VLLPFEHH 460
V P H
Sbjct: 624 VRFPNASH 631
|
Bacillus subtilis (strain 168) (taxid: 224308) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: - |
| >sp|P34422|DPF6_CAEEL Dipeptidyl peptidase family member 6 OS=Caenorhabditis elegans GN=dpf-6 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 331 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN-----KTLTP 385
AVE V +G+A+ S +AV G SYG + T L P F CG+ G N + + P
Sbjct: 495 AVEFAVSKGIANRSEVAVMGGSYGGYETLVALTFTPQTFACGVDIVGPSNLISLVQAIPP 554
Query: 386 F--GFQTEFRTLW-------EATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQA 436
+ GF+ + + E SP+ A+++ KPI+II G D +V ++
Sbjct: 555 YWLGFRKDLIKMVGADISDEEGRQSLQSRSPLFFADRVTKPIMIIQGANDPRVK--QAES 612
Query: 437 ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484
++F AL+ +L P E H +N M + +LQ+ CL
Sbjct: 613 DQFVAALEKKHIPVTYLLYPDEGHGVRKPQNSMEQHGHIETFLQQ-CL 659
|
Removes N-terminal dipeptides sequentially from polypeptides (By similarity). Essential for control of distal tip cell migration. Caenorhabditis elegans (taxid: 6239) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 4 EC: . EC: - |
| >sp|P13676|ACPH_RAT Acylamino-acid-releasing enzyme OS=Rattus norvegicus GN=Apeh PE=1 SV=1 | Back alignment and function description |
|---|
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 323 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK- 381
Q V + AVE+V++ D R+A+ G S+G F++ HL+ P + IAR+ N
Sbjct: 558 QDVKDVQFAVEQVLQEEHFDARRVALMGGSHGGFLSCHLIGQYPETYSACIARNPVINIA 617
Query: 382 -----------TLTPFGFQTEFRTLWEATNVYIEM---SPITHANKIKKPILIIHGEVDD 427
+ GF L + NV+ EM SPI + ++K P+L++ G+ D
Sbjct: 618 SMMGSTDIPDWCMVETGFPYSNSCLPD-LNVWEEMLDKSPIKYIPQVKTPVLLMLGQEDR 676
Query: 428 KVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482
+V Q ++ ALK RL+L P +H + E WL +
Sbjct: 677 RVPF--KQGMEYYRALKARNVPVRLLLYPKSNHALSEVEAESDSFMNAVLWLHTH 729
|
This enzyme catalyzes the hydrolysis of the N-terminal peptide bond of an N-acetylated peptide to generate an N-acetylated amino acid and a peptide with a free N-terminus. It preferentially cleaves off Ac-Ala, Ac-Met and Ac-Ser. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 9 EC: . EC: 1 |
| >sp|Q8R146|APEH_MOUSE Acylamino-acid-releasing enzyme OS=Mus musculus GN=Apeh PE=2 SV=3 | Back alignment and function description |
|---|
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 16/174 (9%)
Query: 323 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN-- 380
Q V + AV++V++ D R+A+ G S+G F++ HL+ P + IAR+ N
Sbjct: 558 QDVKDVQFAVQQVLQEEHFDARRVALMGGSHGGFLSCHLIGQYPETYSACIARNPVINIV 617
Query: 381 ------------KTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDK 428
T F + ++ ++ SPI + ++K P+L++ G+ D +
Sbjct: 618 SMMGTTDIPDWCMVETGFPYSNDYLPDLNVLEEMLDKSPIKYIPQVKTPVLLMLGQEDRR 677
Query: 429 VGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482
V Q ++ ALK RL+L P H + E T WL +
Sbjct: 678 VPF--KQGLEYYHALKARNVPVRLLLYPKSTHALSEVEVESDSFMNTVLWLHTH 729
|
This enzyme catalyzes the hydrolysis of the N-terminal peptide bond of an N-acetylated peptide to generate an N-acetylated amino acid and a peptide with a free N-terminus. It preferentially cleaves off Ac-Ala, Ac-Met and Ac-Ser. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 9 EC: . EC: 1 |
| >sp|P80227|ACPH_BOVIN Acylamino-acid-releasing enzyme OS=Bos taurus GN=APEH PE=1 SV=2 | Back alignment and function description |
|---|
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 21/170 (12%)
Query: 323 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN-- 380
Q V + AVE+V++ D R+A+ G S+G F++ HL+ P + + R+ N
Sbjct: 556 QDVKDVQFAVEQVLQEEHFDAGRVALLGGSHGGFLSCHLIGQYPETYGACVVRNPVINIA 615
Query: 381 ----KTLTPFGFQTEFRTLWEAT-----NVYIEM---SPITHANKIKKPILIIHGEVDDK 428
T P E L+ + NV+ EM SPI + ++K P+L++ G+ D +
Sbjct: 616 SMMGSTDIPDWCVVEAGYLYSSDCLPDPNVWSEMLNKSPIKYTPQVKTPVLLMLGQEDRR 675
Query: 429 VGLFPMQAERFFDALKGHGALSRLVLLPFEHH----VYAARENVMH-VIW 473
V Q ++ ALK RL+L P H V ++ M+ VIW
Sbjct: 676 VPF--KQGMEYYRALKARNVPVRLLLYPKSTHSLSEVEVESDSFMNAVIW 723
|
This enzyme catalyzes the hydrolysis of the N-terminal peptide bond of an N-acetylated peptide to generate an N-acetylated amino acid and a peptide with a free N-terminus. It preferentially cleaves off Ac-Ala, Ac-Met and Ac-Ser. Bos taurus (taxid: 9913) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 9 EC: . EC: 1 |
| >sp|P19205|ACPH_PIG Acylamino-acid-releasing enzyme OS=Sus scrofa GN=APEH PE=1 SV=2 | Back alignment and function description |
|---|
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 16/158 (10%)
Query: 323 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN-- 380
Q V + AVE+V++ D R+A+ G S+G F++ HL+ P + + R+ N
Sbjct: 558 QDVKDVQFAVEQVLQEEHFDAGRVALMGGSHGGFLSCHLIGQYPETYSACVVRNPVINIA 617
Query: 381 ----KTLTP--------FGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDK 428
T P F + ++ ++ SPI +A ++K P+L++ G+ D +
Sbjct: 618 SMMGSTDIPDWCMVEAGFSYSSDCLPDLSVWAAMLDKSPIKYAPQVKTPLLLMLGQEDRR 677
Query: 429 VGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE 466
V Q ++ LK RL+L P H + E
Sbjct: 678 VPF--KQGMEYYRVLKARNVPVRLLLYPKSTHALSEVE 713
|
This enzyme catalyzes the hydrolysis of the N-terminal peptide bond of an N-acetylated peptide to generate an N-acetylated amino acid and a peptide with a free N-terminus. It preferentially cleaves off Ac-Ala, Ac-Met and Ac-Ser. Sus scrofa (taxid: 9823) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 9 EC: . EC: 1 |
| >sp|P14740|DPP4_RAT Dipeptidyl peptidase 4 OS=Rattus norvegicus GN=Dpp4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 116/280 (41%), Gaps = 35/280 (12%)
Query: 222 LQKEMIKYQRKDGVPLTATLY-----LPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVR 276
LQ + ++ D + L T + LPP +D+SK PL +A P K+ DAA ++
Sbjct: 505 LQDVQMPSKKLDFIVLNETRFWYQMILPPHFDKSKKYPLLIDVYAGPCSQKA-DAAFRL- 562
Query: 277 GSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP---NDRFVEQLVSSAEAAVE 333
N + + T ++I A G +GDK+ N R V A
Sbjct: 563 ---NWATYLASTENIIV-----ASFDGRGSGY--QGDKIMHAINKRLGTLEVEDQIEAAR 612
Query: 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIA-----RSGSYNKTLTP--F 386
+ ++ G D R+A+ G SYG ++T+ +L +F CGIA R Y+ T
Sbjct: 613 QFLKMGFVDSKRVAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYM 672
Query: 387 GFQTEFRTLWEATNVYIEMSPITHANKIKK-PILIIHGEVDDKVGLFPMQAERFFDALKG 445
G T L + Y + ++ A K+ L+IHG DD V Q+ + AL
Sbjct: 673 GLPTPEDNL----DHYRNSTVMSRAENFKQVEYLLIHGTADDNVHF--QQSAQISKALVD 726
Query: 446 HGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485
G + + E H A+ H+ +LQ+ C S
Sbjct: 727 AGVDFQAMWYTDEDHGIASSTAHQHIYSHMSHFLQQ-CFS 765
|
Cell surface glycoprotein receptor involved in the costimulatory signal essential for T-cell receptor (TCR)-mediated T-cell activation. Acts as a positive regulator of T-cell coactivation, by binding at least ADA, CAV1, IGF2R, and PTPRC. Its binding to CAV1 and CARD11 induces T-cell proliferation and NF-kappa-B activation in a T-cell receptor/CD3-dependent manner. Its interaction with ADA also regulates lymphocyte-epithelial cell adhesion. In association with FAP is involved in the pericellular proteolysis of the extracellular matrix (ECM), the migration and invasion of endothelial cells into the ECM. May be involved in the promotion of lymphatic endothelial cells adhesion, migration and tube formation. When overexpressed, enhanced cell proliferation, a process inhibited by GPC3. Acts also as a serine exopeptidase with a dipeptidyl peptidase activity that regulates various physiological processes by cleaving peptides in the circulation, including many chemokines, mitogenic growth factors, neuropeptides and peptide hormones (By similarity). Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 4 EC: . EC: 5 |
| >sp|P13798|ACPH_HUMAN Acylamino-acid-releasing enzyme OS=Homo sapiens GN=APEH PE=1 SV=4 | Back alignment and function description |
|---|
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 16/174 (9%)
Query: 323 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN-- 380
Q V + AVE+V++ D S +A+ G S+G F++ HL+ P + +AR+ N
Sbjct: 558 QDVKDVQFAVEQVLQEEHFDASHVALMGGSHGGFISCHLIGQYPETYRACVARNPVINIA 617
Query: 381 ----KTLTP--------FGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDK 428
T P F F ++ ++ SPI + ++K P+L++ G+ D +
Sbjct: 618 SMLGSTDIPDWCVVEAGFPFSSDCLPDLSVWAEMLDKSPIRYIPQVKTPLLLMLGQEDRR 677
Query: 429 VGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482
V Q ++ ALK RL+L P H + E WL+ +
Sbjct: 678 VPF--KQGMEYYRALKTRNVPVRLLLYPKSTHALSEVEVESDSFMNAVLWLRTH 729
|
This enzyme catalyzes the hydrolysis of the N-terminal peptide bond of an N-acetylated peptide to generate an N-acetylated amino acid and a peptide with a free N-terminus. It preferentially cleaves off Ac-Ala, Ac-Met and Ac-Ser. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 4 EC: . EC: 1 EC: 9 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 494 | ||||||
| 359479944 | 961 | PREDICTED: probable glutamyl endopeptida | 0.987 | 0.507 | 0.758 | 0.0 | |
| 297743980 | 913 | unnamed protein product [Vitis vinifera] | 0.987 | 0.534 | 0.758 | 0.0 | |
| 255548453 | 926 | dipeptidyl-peptidase, putative [Ricinus | 0.987 | 0.526 | 0.754 | 0.0 | |
| 332278170 | 960 | RecName: Full=Probable glutamyl endopept | 0.989 | 0.509 | 0.746 | 0.0 | |
| 30690669 | 961 | prolyl oligopeptidase-like protein [Arab | 0.989 | 0.508 | 0.746 | 0.0 | |
| 297828471 | 962 | serine-type peptidase [Arabidopsis lyrat | 0.989 | 0.508 | 0.744 | 0.0 | |
| 18086370 | 960 | At2g47390/T8I13.23 [Arabidopsis thaliana | 0.989 | 0.509 | 0.744 | 0.0 | |
| 356572793 | 948 | PREDICTED: probable glutamyl endopeptida | 0.989 | 0.515 | 0.746 | 0.0 | |
| 449436423 | 970 | PREDICTED: probable glutamyl endopeptida | 0.987 | 0.503 | 0.737 | 0.0 | |
| 449436421 | 971 | PREDICTED: probable glutamyl endopeptida | 0.987 | 0.502 | 0.737 | 0.0 |
| >gi|359479944|ref|XP_002270510.2| PREDICTED: probable glutamyl endopeptidase, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/488 (75%), Positives = 431/488 (88%)
Query: 2 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY 61
VE QD GDA VEVSPRDI+Y QPAEP +GE+ ILHKLDLR+ +SWCDDSLALV E+WY
Sbjct: 424 VETQDEGDAKVEVSPRDIVYMQPAEPLDGEQQAILHKLDLRYGGISWCDDSLALVYESWY 483
Query: 62 KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 121
KT +TRTW++ PGS+DV+PR+LFDR E+VYSDPGSPM+ RT+ GT VIAKIKKENDE
Sbjct: 484 KTRRTRTWVISPGSEDVSPRILFDRSSEDVYSDPGSPMLRRTTAGTYVIAKIKKENDEGT 543
Query: 122 YILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQL 181
YILLNG G TPEGNIPFLDLFDINTGSKERIWES++EKY+ET VAL+ Q E D+ LNQL
Sbjct: 544 YILLNGSGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETVVALMSDQSEGDLYLNQL 603
Query: 182 KILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATL 241
KILTSKESKTE TQY I SW KK+ QITNFPHPYP LASLQKEMI+Y+RKDGV LTATL
Sbjct: 604 KILTSKESKTENTQYFIQSWLDKKACQITNFPHPYPQLASLQKEMIRYERKDGVQLTATL 663
Query: 242 YLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301
YLPPGYD SKDGPLPCL W+YP ++KSKDAAGQVRGSPNEF+G+ PTS+L++LARRFA+L
Sbjct: 664 YLPPGYDPSKDGPLPCLVWSYPGEFKSKDAAGQVRGSPNEFAGIGPTSALLWLARRFAIL 723
Query: 302 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL 361
+GP+IPIIGEG++ NDR+VEQLV+SAEAAVEEV+RRGVA P++IAVGGHSYGAFMTA+L
Sbjct: 724 SGPTIPIIGEGNEEANDRYVEQLVASAEAAVEEVIRRGVAHPNKIAVGGHSYGAFMTANL 783
Query: 362 LAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILII 421
LAHAPHLFCCGIARSG+YN+TLTPFGFQ E RTLWEAT+ Y+EMSP ANKIK+P+L+I
Sbjct: 784 LAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATDTYVEMSPFMSANKIKRPVLLI 843
Query: 422 HGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481
HGE D+ G MQ++RFF+ALKGHGAL RLV+LPFE H YAARE++MHV+WETDRWLQK
Sbjct: 844 HGEEDNNPGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 903
Query: 482 YCLSNTSD 489
+C+SNT++
Sbjct: 904 HCVSNTTN 911
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297743980|emb|CBI36950.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/488 (75%), Positives = 431/488 (88%)
Query: 2 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY 61
VE QD GDA VEVSPRDI+Y QPAEP +GE+ ILHKLDLR+ +SWCDDSLALV E+WY
Sbjct: 367 VETQDEGDAKVEVSPRDIVYMQPAEPLDGEQQAILHKLDLRYGGISWCDDSLALVYESWY 426
Query: 62 KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 121
KT +TRTW++ PGS+DV+PR+LFDR E+VYSDPGSPM+ RT+ GT VIAKIKKENDE
Sbjct: 427 KTRRTRTWVISPGSEDVSPRILFDRSSEDVYSDPGSPMLRRTTAGTYVIAKIKKENDEGT 486
Query: 122 YILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQL 181
YILLNG G TPEGNIPFLDLFDINTGSKERIWES++EKY+ET VAL+ Q E D+ LNQL
Sbjct: 487 YILLNGSGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETVVALMSDQSEGDLYLNQL 546
Query: 182 KILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATL 241
KILTSKESKTE TQY I SW KK+ QITNFPHPYP LASLQKEMI+Y+RKDGV LTATL
Sbjct: 547 KILTSKESKTENTQYFIQSWLDKKACQITNFPHPYPQLASLQKEMIRYERKDGVQLTATL 606
Query: 242 YLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301
YLPPGYD SKDGPLPCL W+YP ++KSKDAAGQVRGSPNEF+G+ PTS+L++LARRFA+L
Sbjct: 607 YLPPGYDPSKDGPLPCLVWSYPGEFKSKDAAGQVRGSPNEFAGIGPTSALLWLARRFAIL 666
Query: 302 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL 361
+GP+IPIIGEG++ NDR+VEQLV+SAEAAVEEV+RRGVA P++IAVGGHSYGAFMTA+L
Sbjct: 667 SGPTIPIIGEGNEEANDRYVEQLVASAEAAVEEVIRRGVAHPNKIAVGGHSYGAFMTANL 726
Query: 362 LAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILII 421
LAHAPHLFCCGIARSG+YN+TLTPFGFQ E RTLWEAT+ Y+EMSP ANKIK+P+L+I
Sbjct: 727 LAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATDTYVEMSPFMSANKIKRPVLLI 786
Query: 422 HGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481
HGE D+ G MQ++RFF+ALKGHGAL RLV+LPFE H YAARE++MHV+WETDRWLQK
Sbjct: 787 HGEEDNNPGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 846
Query: 482 YCLSNTSD 489
+C+SNT++
Sbjct: 847 HCVSNTTN 854
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255548453|ref|XP_002515283.1| dipeptidyl-peptidase, putative [Ricinus communis] gi|223545763|gb|EEF47267.1| dipeptidyl-peptidase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/488 (75%), Positives = 425/488 (87%)
Query: 2 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY 61
E QD GDA VEVSPRDI+Y Q AEP +GE+PEIL KLDLR+ +SWCDDSLALV E+WY
Sbjct: 389 AETQDGGDAKVEVSPRDIVYAQLAEPLDGEQPEILQKLDLRYGGISWCDDSLALVYESWY 448
Query: 62 KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 121
KT +TRTW++ PG++DV+PR+LFDR E+VYSDPGSPMM RT +G VIAKIKKENDE
Sbjct: 449 KTRRTRTWVISPGAEDVSPRILFDRSSEDVYSDPGSPMMRRTPSGNYVIAKIKKENDEGT 508
Query: 122 YILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQL 181
Y+LLNG G TPEG+IPFLDLFDINTGSKERIW+S++EK++E+ VAL+ E D+ L+QL
Sbjct: 509 YVLLNGSGATPEGDIPFLDLFDINTGSKERIWQSDKEKHYESVVALMSDIKEGDLYLDQL 568
Query: 182 KILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATL 241
K+LTSKESKTE TQY+I SWP KK+ QITNFPHPYP LASLQKEMI+YQRKDGV LTATL
Sbjct: 569 KVLTSKESKTENTQYYIQSWPDKKACQITNFPHPYPQLASLQKEMIRYQRKDGVQLTATL 628
Query: 242 YLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301
YLPPGYD SKDGPLPCL W+YP ++KSKDAAGQVRGSPNEF+G+ PTS L++LARRFA+L
Sbjct: 629 YLPPGYDPSKDGPLPCLVWSYPGEFKSKDAAGQVRGSPNEFAGIGPTSVLLWLARRFAIL 688
Query: 302 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL 361
AGP+IPIIGEGD NDR+VEQLV+SAEAAVEEV+RRGVA P +IAVGGHSYGAFMTA+L
Sbjct: 689 AGPTIPIIGEGDDEANDRYVEQLVASAEAAVEEVIRRGVAHPGKIAVGGHSYGAFMTANL 748
Query: 362 LAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILII 421
LAHAPHLFCCGIARSG+YN+TLTPFGFQ E RTLWEAT Y+EMSP ANKIKKPIL+I
Sbjct: 749 LAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATTTYVEMSPFMSANKIKKPILLI 808
Query: 422 HGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481
HGE D+ G MQ++RFF+ALKGHGAL RLV+LPFE H YAARE++MHV+WETDRWLQK
Sbjct: 809 HGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 868
Query: 482 YCLSNTSD 489
YC+ NTSD
Sbjct: 869 YCVPNTSD 876
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|332278170|sp|Q8VZF3.2|CGEP_ARATH RecName: Full=Probable glutamyl endopeptidase, chloroplastic; Flags: Precursor | Back alignment and taxonomy information |
|---|
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/489 (74%), Positives = 423/489 (86%)
Query: 2 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY 61
E QD GDA +EVSPRDI+Y Q AEP GE+PE+LHKLDLR+ +SWCDD+LALV E+WY
Sbjct: 430 AETQDGGDAKMEVSPRDIVYMQSAEPLAGEEPEVLHKLDLRYGGISWCDDTLALVYESWY 489
Query: 62 KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 121
KT +TRTW++ PGS DV+PR+LFDR E+VYSDPGS M+ RT GT VIAKIKKENDE
Sbjct: 490 KTRRTRTWVISPGSNDVSPRILFDRSSEDVYSDPGSTMLRRTDAGTYVIAKIKKENDEGT 549
Query: 122 YILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQL 181
Y+LLNG G TP+GN+PFLDLFDINTG+KERIWES++EKYFET VAL+ Q E D+ + +L
Sbjct: 550 YVLLNGSGATPQGNVPFLDLFDINTGNKERIWESDKEKYFETVVALMSDQKEGDLKMEEL 609
Query: 182 KILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATL 241
KILTSKESKTE TQY + WP +K QITNFPHPYP LASLQKEMI+YQRKDGV LTATL
Sbjct: 610 KILTSKESKTENTQYSLQLWPDRKVQQITNFPHPYPQLASLQKEMIRYQRKDGVQLTATL 669
Query: 242 YLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301
YLPPGYD SKDGPLPCLFW+YP ++KSKDAAGQVRGSPNEF+G+ TS+L++LARRFA+L
Sbjct: 670 YLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFAGIGSTSALLWLARRFAIL 729
Query: 302 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL 361
+GP+IPIIGEGD+ NDR+VEQLV+SAEAAVEEVVRRGVAD S+IAVGGHSYGAFMTA+L
Sbjct: 730 SGPTIPIIGEGDEEANDRYVEQLVASAEAAVEEVVRRGVADRSKIAVGGHSYGAFMTANL 789
Query: 362 LAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILII 421
LAHAPHLF CGIARSG+YN+TLTPFGFQ E RTLWEATNVY+EMSP ANKIKKPIL+I
Sbjct: 790 LAHAPHLFACGIARSGAYNRTLTPFGFQNEDRTLWEATNVYVEMSPFMSANKIKKPILLI 849
Query: 422 HGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481
HGE D+ G MQ++RFF+ALKGHGAL RLV+LP E H Y+ARE++MHV+WETDRWLQK
Sbjct: 850 HGEEDNNPGTLTMQSDRFFNALKGHGALCRLVVLPHESHGYSARESIMHVLWETDRWLQK 909
Query: 482 YCLSNTSDG 490
YC+ NTSD
Sbjct: 910 YCVPNTSDA 918
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30690669|ref|NP_850473.1| prolyl oligopeptidase-like protein [Arabidopsis thaliana] gi|330255741|gb|AEC10835.1| prolyl oligopeptidase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/489 (74%), Positives = 423/489 (86%)
Query: 2 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY 61
E QD GDA +EVSPRDI+Y Q AEP GE+PE+LHKLDLR+ +SWCDD+LALV E+WY
Sbjct: 431 AETQDGGDAKMEVSPRDIVYMQSAEPLAGEEPEVLHKLDLRYGGISWCDDTLALVYESWY 490
Query: 62 KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 121
KT +TRTW++ PGS DV+PR+LFDR E+VYSDPGS M+ RT GT VIAKIKKENDE
Sbjct: 491 KTRRTRTWVISPGSNDVSPRILFDRSSEDVYSDPGSTMLRRTDAGTYVIAKIKKENDEGT 550
Query: 122 YILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQL 181
Y+LLNG G TP+GN+PFLDLFDINTG+KERIWES++EKYFET VAL+ Q E D+ + +L
Sbjct: 551 YVLLNGSGATPQGNVPFLDLFDINTGNKERIWESDKEKYFETVVALMSDQKEGDLKMEEL 610
Query: 182 KILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATL 241
KILTSKESKTE TQY + WP +K QITNFPHPYP LASLQKEMI+YQRKDGV LTATL
Sbjct: 611 KILTSKESKTENTQYSLQLWPDRKVQQITNFPHPYPQLASLQKEMIRYQRKDGVQLTATL 670
Query: 242 YLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301
YLPPGYD SKDGPLPCLFW+YP ++KSKDAAGQVRGSPNEF+G+ TS+L++LARRFA+L
Sbjct: 671 YLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFAGIGSTSALLWLARRFAIL 730
Query: 302 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL 361
+GP+IPIIGEGD+ NDR+VEQLV+SAEAAVEEVVRRGVAD S+IAVGGHSYGAFMTA+L
Sbjct: 731 SGPTIPIIGEGDEEANDRYVEQLVASAEAAVEEVVRRGVADRSKIAVGGHSYGAFMTANL 790
Query: 362 LAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILII 421
LAHAPHLF CGIARSG+YN+TLTPFGFQ E RTLWEATNVY+EMSP ANKIKKPIL+I
Sbjct: 791 LAHAPHLFACGIARSGAYNRTLTPFGFQNEDRTLWEATNVYVEMSPFMSANKIKKPILLI 850
Query: 422 HGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481
HGE D+ G MQ++RFF+ALKGHGAL RLV+LP E H Y+ARE++MHV+WETDRWLQK
Sbjct: 851 HGEEDNNPGTLTMQSDRFFNALKGHGALCRLVVLPHESHGYSARESIMHVLWETDRWLQK 910
Query: 482 YCLSNTSDG 490
YC+ NTSD
Sbjct: 911 YCVPNTSDA 919
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297828471|ref|XP_002882118.1| serine-type peptidase [Arabidopsis lyrata subsp. lyrata] gi|297327957|gb|EFH58377.1| serine-type peptidase [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/489 (74%), Positives = 424/489 (86%)
Query: 2 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY 61
E QD GDA +EVSPRDI+Y Q AEP GE+PE+LHKLDLR+ +SWCDD+LALV E+WY
Sbjct: 431 AETQDGGDAKIEVSPRDIVYMQSAEPLAGEEPEVLHKLDLRYGGISWCDDTLALVYESWY 490
Query: 62 KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 121
KT +TRTW++ PGS DV+PR+LFDR E+VYSDPGS M+ RT+ GT VIAKIKKENDE
Sbjct: 491 KTRRTRTWVISPGSNDVSPRILFDRSSEDVYSDPGSTMLRRTAAGTYVIAKIKKENDEGT 550
Query: 122 YILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQL 181
Y+LLNG G TP+GN+PFLDLFDINTG+KERIWES++EKYFET VAL+ Q E D+ + +L
Sbjct: 551 YVLLNGSGATPQGNVPFLDLFDINTGNKERIWESDKEKYFETVVALMSDQKEGDLKMEEL 610
Query: 182 KILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATL 241
KILTSKESKTE TQY + WP +K QITNFPHPYP LASLQKEMI+YQRKDGV LTATL
Sbjct: 611 KILTSKESKTENTQYSLQLWPDRKVQQITNFPHPYPQLASLQKEMIRYQRKDGVQLTATL 670
Query: 242 YLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301
YLPPGYD SKDGPLPCLFW+YP ++KSKDAAGQVRGSPNEF+G+ TS+L++LARRFA+L
Sbjct: 671 YLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFAGIGSTSALLWLARRFAIL 730
Query: 302 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL 361
+GP+IPIIGEGD+ NDR+VEQLV+SAEAAVEEVVRRGVA PS+IAVGGHSYGAFMTA+L
Sbjct: 731 SGPTIPIIGEGDEEANDRYVEQLVASAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANL 790
Query: 362 LAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILII 421
LAHAPHLF CGIARSG+YN+TLTPFGFQ E RTLWEATNVY+EMSP ANKIKKPIL+I
Sbjct: 791 LAHAPHLFSCGIARSGAYNRTLTPFGFQNEDRTLWEATNVYVEMSPFMSANKIKKPILLI 850
Query: 422 HGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481
HGE D+ G MQ++RFF+ALKGHGAL RLV+LP E H Y+ARE++MHV+WETDRWLQK
Sbjct: 851 HGEEDNNPGTLTMQSDRFFNALKGHGALCRLVVLPHESHGYSARESIMHVLWETDRWLQK 910
Query: 482 YCLSNTSDG 490
YC+ NT+D
Sbjct: 911 YCVPNTADA 919
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18086370|gb|AAL57645.1| At2g47390/T8I13.23 [Arabidopsis thaliana] gi|27363294|gb|AAO11566.1| At2g47390/T8I13.23 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/489 (74%), Positives = 422/489 (86%)
Query: 2 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY 61
E QD GDA +EVSPRDI+Y Q AEP GE+PE+LHKLDLR+ +SWCDD+LALV E+WY
Sbjct: 430 AETQDGGDAKMEVSPRDIVYMQSAEPLAGEEPEVLHKLDLRYGGISWCDDTLALVYESWY 489
Query: 62 KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 121
KT +TRTW++ PGS DV+PR+LFDR E+VYSDPGS M+ RT GT VIAKIKKENDE
Sbjct: 490 KTRRTRTWVISPGSNDVSPRILFDRSSEDVYSDPGSTMLRRTDAGTYVIAKIKKENDEGT 549
Query: 122 YILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQL 181
Y+LLNG G TP+GN+PFLDLFDINTG+KERIWES++EKYFET VAL+ Q E D+ + +L
Sbjct: 550 YVLLNGSGATPQGNVPFLDLFDINTGNKERIWESDKEKYFETVVALMSDQKEGDLKMEEL 609
Query: 182 KILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATL 241
KILTSKESKTE TQY + WP +K QITNFPHPYP LASLQKEMI+YQRKDGV LTATL
Sbjct: 610 KILTSKESKTENTQYSLQLWPDRKVQQITNFPHPYPQLASLQKEMIRYQRKDGVQLTATL 669
Query: 242 YLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301
YLPPGYD SKDGPLP LFW+YP ++KSKDAAGQVRGSPNEF+G+ TS+L++LARRFA+L
Sbjct: 670 YLPPGYDPSKDGPLPYLFWSYPGEFKSKDAAGQVRGSPNEFAGIGSTSALLWLARRFAIL 729
Query: 302 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL 361
+GP+IPIIGEGD+ NDR+VEQLV+SAEAAVEEVVRRGVAD S+IAVGGHSYGAFMTA+L
Sbjct: 730 SGPTIPIIGEGDEEANDRYVEQLVASAEAAVEEVVRRGVADRSKIAVGGHSYGAFMTANL 789
Query: 362 LAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILII 421
LAHAPHLF CGIARSG+YN+TLTPFGFQ E RTLWEATNVY+EMSP ANKIKKPIL+I
Sbjct: 790 LAHAPHLFACGIARSGAYNRTLTPFGFQNEDRTLWEATNVYVEMSPFMSANKIKKPILLI 849
Query: 422 HGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481
HGE D+ G MQ++RFF+ALKGHGAL RLV+LP E H Y+ARE++MHV+WETDRWLQK
Sbjct: 850 HGEEDNNPGTLTMQSDRFFNALKGHGALCRLVVLPHESHGYSARESIMHVLWETDRWLQK 909
Query: 482 YCLSNTSDG 490
YC+ NTSD
Sbjct: 910 YCVPNTSDA 918
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356572793|ref|XP_003554550.1| PREDICTED: probable glutamyl endopeptidase, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/490 (74%), Positives = 422/490 (86%), Gaps = 1/490 (0%)
Query: 2 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY 61
VE QD GDA VE+SPRDIIYTQPAEP EGE+P ILHKLD R+ VSWCDDSLALV E+WY
Sbjct: 408 VETQDGGDAKVEISPRDIIYTQPAEPLEGEQPTILHKLDFRYGGVSWCDDSLALVYESWY 467
Query: 62 KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 121
KT + RTW+V PGS+DVAPR+LFDR E+VYSDPGSPMM RT GT +IA+IKKE+DE
Sbjct: 468 KTRKIRTWVVSPGSEDVAPRILFDRSSEDVYSDPGSPMMRRTQAGTYIIARIKKESDEGR 527
Query: 122 YILLNGRGFTPEGNIPFLDLFDINTGSK-ERIWESNREKYFETAVALVFGQGEEDINLNQ 180
YI+LNG G TPEGNIPFLDLFDINTG K ERIWESN+EKY+ET VAL+ Q E + L++
Sbjct: 528 YIILNGIGATPEGNIPFLDLFDINTGKKMERIWESNKEKYYETVVALMSDQEEGYLYLDK 587
Query: 181 LKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTAT 240
LKILTSKESKTE TQY+ +SWP KK Q+TNFPHPYP LASLQKEMIKYQRKDGV LTAT
Sbjct: 588 LKILTSKESKTENTQYYFVSWPDKKVVQVTNFPHPYPQLASLQKEMIKYQRKDGVQLTAT 647
Query: 241 LYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 300
LYLPPGY+ S DGPLPCL W+YP ++KSKDAAGQVRGSPNEF+G+ TS+L++LARRFA+
Sbjct: 648 LYLPPGYNPSTDGPLPCLVWSYPGEFKSKDAAGQVRGSPNEFAGIGSTSALLWLARRFAI 707
Query: 301 LAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAH 360
L+GP+IPIIGEG++ NDR+VEQLV+SAEAAVEEV+RRGVADP +IAVGGHSYGAFM A+
Sbjct: 708 LSGPTIPIIGEGNEEANDRYVEQLVASAEAAVEEVIRRGVADPKKIAVGGHSYGAFMAAN 767
Query: 361 LLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILI 420
LLAHAPHLFCCGIARSG+YN+TLTPFGFQ E RTLWEATN Y+EMSP ANK+KKPIL+
Sbjct: 768 LLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATNTYVEMSPFMSANKVKKPILL 827
Query: 421 IHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480
IHGE D+ G MQ+ RFF+ALKGHGAL RLV+LP E H Y ARE++MHV+WETDRWL
Sbjct: 828 IHGEEDNNPGTLTMQSGRFFNALKGHGALCRLVILPHESHGYTARESIMHVLWETDRWLY 887
Query: 481 KYCLSNTSDG 490
K+C+SN+SD
Sbjct: 888 KHCVSNSSDA 897
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449436423|ref|XP_004135992.1| PREDICTED: probable glutamyl endopeptidase, chloroplastic-like isoform 2 [Cucumis sativus] gi|449507837|ref|XP_004163143.1| PREDICTED: probable glutamyl endopeptidase, chloroplastic-like isoform 2 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/488 (73%), Positives = 424/488 (86%)
Query: 2 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY 61
VE QD GDA VEVSPRDI+YT+ AEP E E+PEILHKLDLR+ +SWCDDSLALV E+WY
Sbjct: 434 VETQDGGDARVEVSPRDIVYTESAEPLESEQPEILHKLDLRYGGISWCDDSLALVYESWY 493
Query: 62 KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 121
KT + RTW++ PGSK+ R+LFDR E+VYSDPGSPM+ RT GT VIAK+KKEN +
Sbjct: 494 KTRKIRTWVISPGSKEDNARLLFDRSSEDVYSDPGSPMVRRTPFGTYVIAKLKKENYDGT 553
Query: 122 YILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQL 181
Y+LLNGRG TPEGNIPF+DLFDINTGSKERIW+S+RE Y+E+ VAL+ Q E D+N+N+L
Sbjct: 554 YVLLNGRGATPEGNIPFIDLFDINTGSKERIWKSDRETYYESVVALMSDQKEGDLNINEL 613
Query: 182 KILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATL 241
K LTSKESKTE TQY+IL WP K +SQIT FPHPYP LASLQKEMI+Y+RKDGV LTATL
Sbjct: 614 KFLTSKESKTENTQYYILRWPGKTASQITKFPHPYPQLASLQKEMIRYERKDGVQLTATL 673
Query: 242 YLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301
YLPP YD +KDGPLPCL W+YP ++KSKDAAGQVRGSPNEF+G+ PTS+L++LARRFA+L
Sbjct: 674 YLPPNYDPAKDGPLPCLIWSYPGEFKSKDAAGQVRGSPNEFAGIGPTSALLWLARRFAIL 733
Query: 302 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL 361
AGP+IPIIGEG++ NDR+VEQLV SAEAAV+EV++RGVA PS+IAVGGHSYGAFMTA+L
Sbjct: 734 AGPTIPIIGEGNEEANDRYVEQLVGSAEAAVQEVIKRGVAHPSKIAVGGHSYGAFMTANL 793
Query: 362 LAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILII 421
LAHAPHLFCCGIARSG+YN+TLTPFGFQ E RTLWEAT+ Y+EMSP ANKIKKPIL+I
Sbjct: 794 LAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFISANKIKKPILLI 853
Query: 422 HGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481
HGE D+ G PMQ++RFF+ALKGHGAL RLV+LPFE H Y++RE++MHV+WETDRWL+K
Sbjct: 854 HGEEDNNPGTLPMQSDRFFNALKGHGALCRLVVLPFESHGYSSRESIMHVLWETDRWLEK 913
Query: 482 YCLSNTSD 489
YC SN SD
Sbjct: 914 YCSSNASD 921
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449436421|ref|XP_004135991.1| PREDICTED: probable glutamyl endopeptidase, chloroplastic-like isoform 1 [Cucumis sativus] gi|449507834|ref|XP_004163142.1| PREDICTED: probable glutamyl endopeptidase, chloroplastic-like isoform 1 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/488 (73%), Positives = 424/488 (86%)
Query: 2 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY 61
VE QD GDA VEVSPRDI+YT+ AEP E E+PEILHKLDLR+ +SWCDDSLALV E+WY
Sbjct: 434 VETQDGGDARVEVSPRDIVYTESAEPLESEQPEILHKLDLRYGGISWCDDSLALVYESWY 493
Query: 62 KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 121
KT + RTW++ PGSK+ R+LFDR E+VYSDPGSPM+ RT GT VIAK+KKEN +
Sbjct: 494 KTRKIRTWVISPGSKEDNARLLFDRSSEDVYSDPGSPMVRRTPFGTYVIAKLKKENYDGT 553
Query: 122 YILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQL 181
Y+LLNGRG TPEGNIPF+DLFDINTGSKERIW+S+RE Y+E+ VAL+ Q E D+N+N+L
Sbjct: 554 YVLLNGRGATPEGNIPFIDLFDINTGSKERIWKSDRETYYESVVALMSDQKEGDLNINEL 613
Query: 182 KILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATL 241
K LTSKESKTE TQY+IL WP K +SQIT FPHPYP LASLQKEMI+Y+RKDGV LTATL
Sbjct: 614 KFLTSKESKTENTQYYILRWPGKTASQITKFPHPYPQLASLQKEMIRYERKDGVQLTATL 673
Query: 242 YLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301
YLPP YD +KDGPLPCL W+YP ++KSKDAAGQVRGSPNEF+G+ PTS+L++LARRFA+L
Sbjct: 674 YLPPNYDPAKDGPLPCLIWSYPGEFKSKDAAGQVRGSPNEFAGIGPTSALLWLARRFAIL 733
Query: 302 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL 361
AGP+IPIIGEG++ NDR+VEQLV SAEAAV+EV++RGVA PS+IAVGGHSYGAFMTA+L
Sbjct: 734 AGPTIPIIGEGNEEANDRYVEQLVGSAEAAVQEVIKRGVAHPSKIAVGGHSYGAFMTANL 793
Query: 362 LAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILII 421
LAHAPHLFCCGIARSG+YN+TLTPFGFQ E RTLWEAT+ Y+EMSP ANKIKKPIL+I
Sbjct: 794 LAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFISANKIKKPILLI 853
Query: 422 HGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481
HGE D+ G PMQ++RFF+ALKGHGAL RLV+LPFE H Y++RE++MHV+WETDRWL+K
Sbjct: 854 HGEEDNNPGTLPMQSDRFFNALKGHGALCRLVVLPFESHGYSSRESIMHVLWETDRWLEK 913
Query: 482 YCLSNTSD 489
YC SN SD
Sbjct: 914 YCSSNASD 921
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 494 | ||||||
| UNIPROTKB|Q8EHB8 | 801 | SO_1310 "Serine peptidase S9 f | 0.858 | 0.529 | 0.369 | 5.1e-74 | |
| TIGR_CMR|SO_1310 | 801 | SO_1310 "conserved hypothetica | 0.858 | 0.529 | 0.369 | 5.1e-74 | |
| TIGR_CMR|SO_4537 | 675 | SO_4537 "peptidase, putative" | 0.277 | 0.202 | 0.267 | 1e-07 | |
| TAIR|locus:2129920 | 764 | AARE "acylamino acid-releasing | 0.283 | 0.183 | 0.292 | 3.3e-07 | |
| UNIPROTKB|Q47UC7 | 693 | CPS_4957 "Putative uncharacter | 0.668 | 0.476 | 0.208 | 5.9e-06 | |
| TIGR_CMR|CPS_4957 | 693 | CPS_4957 "conserved hypothetic | 0.668 | 0.476 | 0.208 | 5.9e-06 | |
| TAIR|locus:2169789 | 746 | AT5G24260 [Arabidopsis thalian | 0.259 | 0.171 | 0.273 | 3.6e-05 | |
| ZFIN|ZDB-GENE-060421-3674 | 714 | zgc:136971 "zgc:136971" [Danio | 0.236 | 0.163 | 0.315 | 9.8e-05 | |
| TIGR_CMR|SO_4618 | 645 | SO_4618 "prolyl oligopeptidase | 0.204 | 0.156 | 0.302 | 0.00022 | |
| UNIPROTKB|F1N8I0 | 552 | F1N8I0 "Uncharacterized protei | 0.281 | 0.251 | 0.264 | 0.00045 |
| UNIPROTKB|Q8EHB8 SO_1310 "Serine peptidase S9 family" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
Identities = 162/439 (36%), Positives = 245/439 (55%)
Query: 42 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMT 101
R + W ++ LAL+ E K Q R + + + L +R + Y D G
Sbjct: 372 RITDIDWAENHLALITERNSKAQQIRLSSLNTRLGESSLHTLNERNLRDKYQDLGL-FAK 430
Query: 102 RTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYF 161
G + ++ + + ++ G+G TP+G+ PFL + T +W+S +
Sbjct: 431 HYYPGKGQVVSLQ-QGAKTTGLIHYGQGATPQGDKPFLKRTSLITSESSLLWQSASNRL- 488
Query: 162 ETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLAS 221
+V V +NL+ L+++ ++ES TE +L+ K S + P
Sbjct: 489 -ESVRYV-------LNLDPLQLIINRESPTESPSLVLLN--AAKESVLYEQPDGLSAYLG 538
Query: 222 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNE 281
+QK++I ++R DGVPL+ TLYLP Y + + G LP L WAYP ++ + AGQ+ S N+
Sbjct: 539 MQKQLITFKRADGVPLSGTLYLPANYTKEQ-GTLPVLMWAYPREFNDPEVAGQISFSANQ 597
Query: 282 FSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFXXXXXXXXXXXXXXXXXXXXX 341
+ ++P + +A FAV S+PII +GDK ND F
Sbjct: 598 YPTISPRGPIPLVAEGFAVFDKVSMPIIAQGDKESNDTFREQLTANAQAAIDTLVDLGIA 657
Query: 342 DPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNV 401
D +IAVGGHSYGAFM A+LLAH LF GIARSG+YN++LTPFGFQ E RT W+A ++
Sbjct: 658 DRKQIAVGGHSYGAFMVANLLAHTD-LFYAGIARSGAYNRSLTPFGFQNEERTYWQANDI 716
Query: 402 YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV 461
Y +MSP +A+KIK P+L+IHGE+D G FP+Q+ER FDA++G G +RLV+LPFE H
Sbjct: 717 YQQMSPFNYADKIKSPLLLIHGEMDQNSGTFPLQSERLFDAIQGLGGKARLVILPFEGHS 776
Query: 462 YAARENVMHVIWETDRWLQ 480
Y A+E++ H+++E ++L+
Sbjct: 777 YTAKESLEHLLFEQSQFLK 795
|
|
| TIGR_CMR|SO_1310 SO_1310 "conserved hypothetical protein" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
Identities = 162/439 (36%), Positives = 245/439 (55%)
Query: 42 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMT 101
R + W ++ LAL+ E K Q R + + + L +R + Y D G
Sbjct: 372 RITDIDWAENHLALITERNSKAQQIRLSSLNTRLGESSLHTLNERNLRDKYQDLGL-FAK 430
Query: 102 RTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYF 161
G + ++ + + ++ G+G TP+G+ PFL + T +W+S +
Sbjct: 431 HYYPGKGQVVSLQ-QGAKTTGLIHYGQGATPQGDKPFLKRTSLITSESSLLWQSASNRL- 488
Query: 162 ETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLAS 221
+V V +NL+ L+++ ++ES TE +L+ K S + P
Sbjct: 489 -ESVRYV-------LNLDPLQLIINRESPTESPSLVLLN--AAKESVLYEQPDGLSAYLG 538
Query: 222 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNE 281
+QK++I ++R DGVPL+ TLYLP Y + + G LP L WAYP ++ + AGQ+ S N+
Sbjct: 539 MQKQLITFKRADGVPLSGTLYLPANYTKEQ-GTLPVLMWAYPREFNDPEVAGQISFSANQ 597
Query: 282 FSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFXXXXXXXXXXXXXXXXXXXXX 341
+ ++P + +A FAV S+PII +GDK ND F
Sbjct: 598 YPTISPRGPIPLVAEGFAVFDKVSMPIIAQGDKESNDTFREQLTANAQAAIDTLVDLGIA 657
Query: 342 DPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNV 401
D +IAVGGHSYGAFM A+LLAH LF GIARSG+YN++LTPFGFQ E RT W+A ++
Sbjct: 658 DRKQIAVGGHSYGAFMVANLLAHTD-LFYAGIARSGAYNRSLTPFGFQNEERTYWQANDI 716
Query: 402 YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV 461
Y +MSP +A+KIK P+L+IHGE+D G FP+Q+ER FDA++G G +RLV+LPFE H
Sbjct: 717 YQQMSPFNYADKIKSPLLLIHGEMDQNSGTFPLQSERLFDAIQGLGGKARLVILPFEGHS 776
Query: 462 YAARENVMHVIWETDRWLQ 480
Y A+E++ H+++E ++L+
Sbjct: 777 YTAKESLEHLLFEQSQFLK 795
|
|
| TIGR_CMR|SO_4537 SO_4537 "peptidase, putative" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 140 (54.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 39/146 (26%), Positives = 64/146 (43%)
Query: 342 DPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN---KTLTPFGFQ-TEFRTLWE 397
D R+ GG SYG ++T+ +L PH F + + Y+ + F T F W+
Sbjct: 528 DSDRMVAGGASYGGYLTSIILGQ-PHPFKALLIHAAVYDMYAQMSADFAVHSTRFGNYWD 586
Query: 398 ATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPM-QAERFFDALKGHGALSRLVLLP 456
+Y +SP A P L+ HG++D +V P+ Q F L+ SR++ P
Sbjct: 587 NPELYKAISPHYFAANFNTPTLVSHGQLDYRV---PVGQGFELFRTLQTRNVESRMIYFP 643
Query: 457 FEHHVYAARENVMHVIWETDRWLQKY 482
E+H N ++ + W+ Y
Sbjct: 644 DENHWIVKPNNSIYWYNQVKDWMAHY 669
|
|
| TAIR|locus:2129920 AARE "acylamino acid-releasing enzyme" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 151 (58.2 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 46/157 (29%), Positives = 73/157 (46%)
Query: 342 DPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT----LT--P-------FGF 388
DPSRI V G S+G F+T HL+ AP F AR+ N +T P +G
Sbjct: 608 DPSRITVLGGSHGGFLTTHLIGQAPDKFVAAAARNPVCNMASMVGITDIPDWCFFEAYGD 667
Query: 389 QTEFRTLWEATNV--YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGH 446
Q+ + A ++ + +MSPI+H +K+K P L + G D +V + ++ ALK
Sbjct: 668 QSHYTEAPSAEDLSRFHQMSPISHISKVKTPTLFLLGTKDLRVPI--SNGFQYVRALKEK 725
Query: 447 GALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 483
G ++++ P ++H + W KYC
Sbjct: 726 GVEVKVLVFPNDNHPLDRPQTDYESFLNIAVWFNKYC 762
|
|
| UNIPROTKB|Q47UC7 CPS_4957 "Putative uncharacterized protein" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 139 (54.0 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 74/355 (20%), Positives = 129/355 (36%)
Query: 140 DLFDI-NTGSKERIWE--SNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQY 196
+LF I N G++ + + KY A F G I+ + ++ + +
Sbjct: 324 ELFFIANIGTQSVVAKIKPGSNKYKTVVDAGKFIAGNLSISNSDKTVVVKGHTSQHPNEV 383
Query: 197 HILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLP 256
IL KK +++T+ +A ++E + + +DGV + L P Y + PL
Sbjct: 384 FILRG--KKQTRLTDSNVWLNDIALAKQENLTIKARDGVEIGGVLVYPLDYKNGQRYPLI 441
Query: 257 CLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP 316
PE + KD P + + ++ + R + G +G+ D
Sbjct: 442 MSVHGGPESH-DKDGWMTAYSRPGQLAA-AQGYAVFYPNYRGSTGKGVDYSKLGQND--- 496
Query: 317 NDRFXXXXXXXXXXXXXXXXXXXXXDPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARS 376
+ + ++ + G SYG + +A F +
Sbjct: 497 ---YAGKEFDDLVDLKNHLVNIGLVNEKKVGITGGSYGGYASAWGATKLTKHFAASVMFV 553
Query: 377 GSYNKTLTPFG---FQTEFRTL------WEATNVYIEMSPITHANKIKKPILIIHGEVDD 427
G N+ L+ FG E + W+ Y+E SPI + + P+LI+HG+ D
Sbjct: 554 GISNQ-LSKFGTTDISNEMHLVHARSYPWDKWQWYLERSPIYWVEQSETPLLIMHGKADP 612
Query: 428 KVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482
+V P Q+ + +K HG RLV P E H RW+ Y
Sbjct: 613 RV--HPAQSMEMYRYMKVHGKTVRLVYYPGEGHGNKRAAAKYDYSLRLMRWMDNY 665
|
|
| TIGR_CMR|CPS_4957 CPS_4957 "conserved hypothetical protein" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 139 (54.0 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 74/355 (20%), Positives = 129/355 (36%)
Query: 140 DLFDI-NTGSKERIWE--SNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQY 196
+LF I N G++ + + KY A F G I+ + ++ + +
Sbjct: 324 ELFFIANIGTQSVVAKIKPGSNKYKTVVDAGKFIAGNLSISNSDKTVVVKGHTSQHPNEV 383
Query: 197 HILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLP 256
IL KK +++T+ +A ++E + + +DGV + L P Y + PL
Sbjct: 384 FILRG--KKQTRLTDSNVWLNDIALAKQENLTIKARDGVEIGGVLVYPLDYKNGQRYPLI 441
Query: 257 CLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP 316
PE + KD P + + ++ + R + G +G+ D
Sbjct: 442 MSVHGGPESH-DKDGWMTAYSRPGQLAA-AQGYAVFYPNYRGSTGKGVDYSKLGQND--- 496
Query: 317 NDRFXXXXXXXXXXXXXXXXXXXXXDPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARS 376
+ + ++ + G SYG + +A F +
Sbjct: 497 ---YAGKEFDDLVDLKNHLVNIGLVNEKKVGITGGSYGGYASAWGATKLTKHFAASVMFV 553
Query: 377 GSYNKTLTPFG---FQTEFRTL------WEATNVYIEMSPITHANKIKKPILIIHGEVDD 427
G N+ L+ FG E + W+ Y+E SPI + + P+LI+HG+ D
Sbjct: 554 GISNQ-LSKFGTTDISNEMHLVHARSYPWDKWQWYLERSPIYWVEQSETPLLIMHGKADP 612
Query: 428 KVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482
+V P Q+ + +K HG RLV P E H RW+ Y
Sbjct: 613 RV--HPAQSMEMYRYMKVHGKTVRLVYYPGEGHGNKRAAAKYDYSLRLMRWMDNY 665
|
|
| TAIR|locus:2169789 AT5G24260 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 129 (50.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 38/139 (27%), Positives = 68/139 (48%)
Query: 343 PSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF-GFQTE-FRTLWEATN 400
P I V G SYG +++A LL P +F C + SG+ + + F TE + L
Sbjct: 606 PDHIGVYGWSYGGYLSATLLTRYPEIFNCAV--SGAPVTSWDGYDSFYTEKYMGLPTEEE 663
Query: 401 VYIEMSPITHANKI--KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFE 458
Y++ S + H + K+ ++++HG +D+ V R +AL G L++ P E
Sbjct: 664 RYLKSSVMHHVGNLTDKQKLMLVHGMIDENVHF--RHTARLVNALVEAGKRYELLIFPDE 721
Query: 459 HHVYAARENVMHV---IWE 474
H+ +++ +++ IWE
Sbjct: 722 RHMPRKKKDRIYMEQRIWE 740
|
|
| ZFIN|ZDB-GENE-060421-3674 zgc:136971 "zgc:136971" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 128 (50.1 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 42/133 (31%), Positives = 62/133 (46%)
Query: 342 DPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK-TL-----------TPFGFQ 389
DP R+AV G S+G F+ HL+ P + AR+ N TL + G Q
Sbjct: 560 DPDRVAVMGGSHGGFLACHLVGQYPDFYRACAARNPVINAATLLGTSDIVDWRYSSVGLQ 619
Query: 390 TEFRTLWEATNVY--IEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG 447
F L + ++ ++ SPI HA +I+ P+L++ GE D +V P Q + ALK
Sbjct: 620 YAFDRLPTSQSLISMLDKSPIIHAPQIRAPVLLMLGERDRRVS--PHQGLELYRALKSRN 677
Query: 448 ALSRLVLLPFEHH 460
RL+ E H
Sbjct: 678 TPVRLLWFSDEGH 690
|
|
| TIGR_CMR|SO_4618 SO_4618 "prolyl oligopeptidase family protein" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 122 (48.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 33/109 (30%), Positives = 54/109 (49%)
Query: 342 DPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN-----KTLTPF-GFQTEFRTL 395
DP RI + G SYG + A P L+ C ++ +G + ++ F ++ +
Sbjct: 496 DPQRICIVGASYGGYAALMGAAMTPDLYRCAVSVAGVTDVANLVRSSRRFTNYEVVKEQI 555
Query: 396 WEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALK 444
+ NV E SPI+ A+KI P+L++HG+ D V + + FD LK
Sbjct: 556 GDDFNVLYERSPISKADKITIPVLLLHGDKDRVVKV--QHSREMFDELK 602
|
|
| UNIPROTKB|F1N8I0 F1N8I0 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 125 (49.1 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 41/155 (26%), Positives = 64/155 (41%)
Query: 342 DPSRIAVGGHSYGAFMTAHLLAHAPHLF-CCGIARSGSYNKTL-----------TPFGFQ 389
DP R+A+ S+GAF+ HLL P + C + S L T G
Sbjct: 389 DPHRVALLAGSHGAFIALHLLTRQPERYQACALRNPVSNLPALLGTSDIPDWRYTSLGLP 448
Query: 390 TEFRTLWEATN--VYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG 447
F+ + + V ++ SPI A +++ P+L+ G D +V P QA + L+ H
Sbjct: 449 YSFQRVPHVEDLVVMLQRSPIIQAPRVRAPVLLCVGARDRRVS--PTQALELYRVLRAHR 506
Query: 448 ALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482
+RL+ P H E V RW ++
Sbjct: 507 VPTRLLWYPEGGHALTGVETEADVFGNCARWFLQH 541
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q10MJ1 | CGEP_ORYSJ | 3, ., 4, ., 2, 1, ., - | 0.7351 | 0.9838 | 0.5181 | yes | no |
| Q8VZF3 | CGEP_ARATH | 3, ., 4, ., 2, 1, ., - | 0.7464 | 0.9898 | 0.5093 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
 |
 |
 |
 |
 |
 |
 |
 |
||
 | GSVIVG00028112001 | SubName- Full=Chromosome chr7 scaffold_42, whole genome shotgun sequence; (884 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | GSVIVG00015534001 | SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (725 aa) | • | 0.422 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 494 | |||
| COG1506 | 620 | COG1506, DAP2, Dipeptidyl aminopeptidases/acylamin | 2e-45 | |
| pfam00326 | 212 | pfam00326, Peptidase_S9, Prolyl oligopeptidase fam | 1e-25 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 1e-10 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 1e-08 | |
| COG0412 | 236 | COG0412, COG0412, Dienelactone hydrolase and relat | 5e-08 | |
| COG0400 | 207 | COG0400, COG0400, Predicted esterase [General func | 8e-07 | |
| COG0657 | 312 | COG0657, Aes, Esterase/lipase [Lipid metabolism] | 3e-05 | |
| COG4099 | 387 | COG4099, COG4099, Predicted peptidase [General fun | 5e-05 | |
| pfam01738 | 215 | pfam01738, DLH, Dienelactone hydrolase family | 3e-04 | |
| PRK10566 | 249 | PRK10566, PRK10566, esterase; Provisional | 4e-04 | |
| COG1073 | 299 | COG1073, COG1073, Hydrolases of the alpha/beta sup | 0.001 | |
| pfam02129 | 265 | pfam02129, Peptidase_S15, X-Pro dipeptidyl-peptida | 0.001 |
| >gnl|CDD|224423 COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 167 bits (425), Expect = 2e-45
Identities = 86/323 (26%), Positives = 138/323 (42%), Gaps = 34/323 (10%)
Query: 174 EDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASL-QKEMIKYQRK 232
+++ K+ + S TE I + + +++T+ + L + E + Y+
Sbjct: 316 PGFDVDGRKLALAYSSPTE--PPEIYLYDRGEEAKLTSSNNSGLKKVKLAEPEPVTYKSN 373
Query: 233 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLI 292
DG + LY PPG+D K PL + + + G P+ G + +
Sbjct: 374 DGETIHGWLYKPPGFDPRKKYPL--IVYIH--------------GGPSAQVGYSFNPEIQ 417
Query: 293 FLARR-FAVLAGPSIPIIGEGDK---LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAV 348
LA +AVLA G G + + + AAV+ +V+ + DP RI +
Sbjct: 418 VLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGI 477
Query: 349 GGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEAT--------N 400
G SYG +MT P F +A +G + L R E
Sbjct: 478 TGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGESTEGLRFDPEENGGGPPEDRE 536
Query: 401 VYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHH 460
Y + SPI +A+ IK P+L+IHGE DD+V + QAE+ DALK G LV+ P E H
Sbjct: 537 KYEDRSPIFYADNIKTPLLLIHGEEDDRVPIE--QAEQLVDALKRKGKPVELVVFPDEGH 594
Query: 461 VYAARENVMHVIWETDRWLQKYC 483
++ EN + V+ E W +++
Sbjct: 595 GFSRPENRVKVLKEILDWFKRHL 617
|
Length = 620 |
| >gnl|CDD|215859 pfam00326, Peptidase_S9, Prolyl oligopeptidase family | Back alignment and domain information |
|---|
Score = 103 bits (260), Expect = 1e-25
Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 14/179 (7%)
Query: 312 GDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCC 371
G + + AA E ++ +G DP R+A+ G SYG ++T L P LF
Sbjct: 36 GKGDLGQNEFDDFI----AAAEYLIAQGYVDPDRLAIWGGSYGGYLTGAALNQRPDLFKA 91
Query: 372 GIARSG-----SYNKTLTPFGFQ-TEFRTLWEATNVYIEMSPITHA--NKIKKPILIIHG 423
+A +Y +PF + E+ W+ Y +SP + K P+L+IHG
Sbjct: 92 AVAVVPVVDWLTYMSDTSPFTERYMEWGNPWDNEEGYRYLSPYSPYDNVKAYPPLLLIHG 151
Query: 424 EVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482
DD+V P +A + AL+ G L++ P E H N +L K
Sbjct: 152 LHDDRV--PPAEALKLVAALQAKGKNVLLLIFPDEGHGGGKPRNKREEYARELAFLLKV 208
|
Length = 212 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 1e-10
Identities = 39/170 (22%), Positives = 63/170 (37%), Gaps = 15/170 (8%)
Query: 293 FLARRFAVLAGPSIPIIGEGDKLPNDRF-VEQLVSSAEAAVEEVVRRGVADPSRIAVGGH 351
LA + VLA P +P G+ D P + +E + A ++ + + + GH
Sbjct: 20 ALAAGYRVLA-PDLPGHGDSDGPPRTPYSLEDDAADLAALLDAL------GLGPVVLVGH 72
Query: 352 SYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHA 411
S G + A P + + L L ++
Sbjct: 73 SLGGAVALAAAARRPERVAGLVL-ISPPLRDLEELLAADAAALLALLRAALLDADLREAL 131
Query: 412 NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV 461
++ P+L+IHGE D V P A R +AL G + LV+LP H+
Sbjct: 132 ARLTVPVLVIHGEDDPLV--PPEAARRLAEALPG----AELVVLPGAGHL 175
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 1e-08
Identities = 32/131 (24%), Positives = 45/131 (34%), Gaps = 30/131 (22%)
Query: 326 SSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP 385
S E V+ DP RI + GHS G + L A P + + +G
Sbjct: 40 SLGAPDAEAVLADAPLDPERIVLVGHSLGGGVALLLAARDPRVKAAVVLAAGDPP----- 94
Query: 386 FGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG 445
+ K+ P+LIIHG D V P +AE AL G
Sbjct: 95 --------------------DALDDLAKLTVPVLIIHGTRDGVVP--PEEAEALAAALPG 132
Query: 446 HGALSRLVLLP 456
+ LV++
Sbjct: 133 P---AELVVIE 140
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|223489 COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 5e-08
Identities = 41/192 (21%), Positives = 64/192 (33%), Gaps = 43/192 (22%)
Query: 295 ARRFA-----VLA-------GPSIPIIGEGDKLPNDRF----VEQLVSSAEAAVEEVVRR 338
ARR A VLA G I E +L ++++ +AA++ + R+
Sbjct: 47 ARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQ 106
Query: 339 GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEA 398
DP RI V G G + AP + + ++ +G T
Sbjct: 107 PQVDPKRIGVVGFCMGGGLALLAATRAP-----EVKAAVAF------YGGLIADDTA--- 152
Query: 399 TNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFE 458
A KIK P+L+ D + + A AL+ G L + P
Sbjct: 153 -----------DAPKIKVPVLLHLAGEDPYIPAADVDA--LAAALEDAGVKVDLEIYPGA 199
Query: 459 HHVYAARENVMH 470
H +A H
Sbjct: 200 GHGFANDRADYH 211
|
Length = 236 |
| >gnl|CDD|223477 COG0400, COG0400, Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 8e-07
Identities = 32/120 (26%), Positives = 39/120 (32%), Gaps = 26/120 (21%)
Query: 329 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGF 388
+EE+ D SRI + G S GA + L P LF I SG P
Sbjct: 84 AEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGML-----PL-- 136
Query: 389 QTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGA 448
E + PIL+ HG D V L AE + L GA
Sbjct: 137 ---------------EPELLPDLAGT--PILLSHGTEDPVVPLA--LAEALAEYLTASGA 177
|
Length = 207 |
| >gnl|CDD|223730 COG0657, Aes, Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 3e-05
Identities = 49/291 (16%), Positives = 80/291 (27%), Gaps = 55/291 (18%)
Query: 217 PTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVR 276
P + E + G + +Y P D+ P + + + G V
Sbjct: 44 PLPPATSPEDVALAGPSGDGVPVRVYRP---DRKAAATAPVVLYLHG--------GGWVL 92
Query: 277 GSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVV 336
GS + + + A V++ + E P +E ++
Sbjct: 93 GSLRTHDALV---ARLAAAAGAVVVS-VDYRLAPEH---PFPAALEDAYAAYRWLRANAA 145
Query: 337 RRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-------------------LFCCGIARSG 377
G DPSRIAV G S G + LA A
Sbjct: 146 ELG-IDPSRIAVAGDSAGGHLAL-ALALAARDRGLPLPAAQVLISPLLDLTSSAASLPGY 203
Query: 378 SYNKTLTPFGFQTEFRTLWEATNV---YIEMSPITHANKIKK--PILIIHGEVDDKVGLF 432
L F L+ E SP+ ++ + P LI E D
Sbjct: 204 GEADLLDAAAILAWFADLYLGAAPDREDPEASPL-ASDDLSGLPPTLIQTAEFD----PL 258
Query: 433 PMQAERFFDALKGHGALSRLVLLPFEHHVY------AARENVMHVIWETDR 477
+ E + + L+ G L + P H + AR + +
Sbjct: 259 RDEGEAYAERLRAAGVPVELRVYPGMIHGFDLLTGPEARSALRQIAAFLRA 309
|
Length = 312 |
| >gnl|CDD|226584 COG4099, COG4099, Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 5e-05
Identities = 31/155 (20%), Positives = 51/155 (32%), Gaps = 16/155 (10%)
Query: 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPT 288
Y G L LY P Y K P + + + D +
Sbjct: 166 YDESTGNELKYRLYTPKDYAPDKKY-YPLVLFLHGAGQGGSDNDKVLSSG---------I 215
Query: 289 SSLIFLARRFA--VLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRI 346
++ + VLA PI + ++ +E++ + +E + D SRI
Sbjct: 216 GAIAWAGPEDQCFVLAPQYNPIFADSEEKTLLYLIEKI----DLILEVLASTYNIDRSRI 271
Query: 347 AVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 381
V G S G F T L P F + +G ++
Sbjct: 272 YVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDR 306
|
Length = 387 |
| >gnl|CDD|216672 pfam01738, DLH, Dienelactone hydrolase family | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 31/149 (20%), Positives = 50/149 (33%), Gaps = 30/149 (20%)
Query: 320 FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 379
+E +V AA+ + + D ++ V G G + A G+ + S+
Sbjct: 74 RMEAVVDDLLAAINYLRGQPYVDTKKVGVVGFCLGGRLA---FLLAARN---GVDAAVSF 127
Query: 380 NKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQA-ER 438
G + P+ A IK PIL GE D P +A +
Sbjct: 128 Y----GTGPE----------------PPLDEAPAIKAPILAHFGEEDP---FVPAEARDL 164
Query: 439 FFDALKGHGALSRLVLLPFEHHVYAAREN 467
+AL+ L + P H +AA
Sbjct: 165 LEEALRAANVDHELHVYPGAGHAFAADGR 193
|
Length = 215 |
| >gnl|CDD|182555 PRK10566, PRK10566, esterase; Provisional | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 4e-04
Identities = 39/142 (27%), Positives = 55/142 (38%), Gaps = 30/142 (21%)
Query: 332 VEEVVRRGVADPSRIAVGGHSYGAFMTA-HLLAHAPHLFCCG-IARSG---SYNKTLTP- 385
+ G R+AVGG S G MTA ++A P + C + SG S +TL P
Sbjct: 95 RAAIREEGWLLDDRLAVGGASMGG-MTALGIMARHPWVKCVASLMGSGYFTSLARTLFPP 153
Query: 386 -----FGFQTEFRTL------WEATNVYIEMSPITHANKI-KKPILIIHGEVDDKVGLFP 433
Q EF + WE T ++ +P+L+ HG DD V
Sbjct: 154 LIPETAAQQAEFNNIVAPLAEWEVT---------HQLEQLADRPLLLWHGLADDVVP--A 202
Query: 434 MQAERFFDALKGHGALSRLVLL 455
++ R AL+ G L L
Sbjct: 203 AESLRLQQALRERGLDKNLTCL 224
|
Length = 249 |
| >gnl|CDD|223999 COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 40.5 bits (94), Expect = 0.001
Identities = 35/148 (23%), Positives = 56/148 (37%), Gaps = 5/148 (3%)
Query: 337 RRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLW 396
D SRI V G S G + LL P L I + + TL
Sbjct: 153 GPTRLDASRIVVWGESLGGALALLLLGANPELARELIDYLITPGGFAPLPAPEAPLDTLP 212
Query: 397 EATNVYIEMSPITHANKIKK-PILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLL 455
+ + + P A KI P+L++HGE D+ V L AE ++A + L +
Sbjct: 213 LRAVLLLLLDPFDDAEKISPRPVLLVHGERDEVVPLR--DAEDLYEAAR-ERPKKLLFVP 269
Query: 456 PFEH-HVYAARENVMHVIWETDRWLQKY 482
H +Y V + + +L+++
Sbjct: 270 GGGHIDLYDNPPAVEQALDKLAEFLERH 297
|
Length = 299 |
| >gnl|CDD|216890 pfam02129, Peptidase_S15, X-Pro dipeptidyl-peptidase (S15 family) | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.001
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 406 SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEH 459
+ + A+K+K P+L++ G D + ++AL+ G +L+L P+ H
Sbjct: 213 NYLEDADKVKAPVLLVGGWYDW---NVKNGVIQLYEALRAPGVKKKLILGPWTH 263
|
Length = 265 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 494 | |||
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 100.0 | |
| PRK10115 | 686 | protease 2; Provisional | 100.0 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 100.0 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 100.0 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.98 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 99.97 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 99.94 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 99.94 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.9 | |
| PRK10566 | 249 | esterase; Provisional | 99.9 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.89 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.89 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.88 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.88 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.88 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.87 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.86 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.86 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.86 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.85 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.85 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.83 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.81 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.81 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.8 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.8 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.78 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 99.77 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.77 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.77 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.76 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 99.76 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.75 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.74 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 99.73 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.71 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.7 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 99.7 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.7 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.69 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.69 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 99.69 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 99.69 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.68 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.68 | |
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.68 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.68 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 99.68 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.67 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.67 | |
| PLN02511 | 388 | hydrolase | 99.67 | |
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.66 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.66 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.65 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.65 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.64 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.63 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 99.63 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.63 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 99.62 | |
| PLN00021 | 313 | chlorophyllase | 99.62 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 99.62 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.62 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 99.62 | |
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.61 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.61 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 99.6 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.6 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.6 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 99.6 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.6 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 99.59 | |
| PLN02965 | 255 | Probable pheophorbidase | 99.59 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.59 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.58 | |
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.58 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.58 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.58 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 99.57 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.57 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 99.56 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.56 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.55 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 99.55 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.55 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.55 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.55 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.55 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 99.54 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.54 | |
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.54 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 99.54 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.53 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.53 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.52 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 99.52 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.51 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 99.5 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.5 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 99.49 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.49 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.48 | |
| PLN02578 | 354 | hydrolase | 99.48 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.47 | |
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.47 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 99.47 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.47 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.47 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.46 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.45 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.42 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.41 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.4 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.39 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.38 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 99.34 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 99.33 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.33 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.32 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 99.32 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 99.31 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 99.3 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.3 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 99.28 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.27 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.26 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.22 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 99.22 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.2 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.19 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 99.18 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.18 | |
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 99.17 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.17 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 99.16 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 99.15 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 99.1 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.08 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 99.04 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.03 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 99.03 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 98.99 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 98.97 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 98.96 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 98.95 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 98.94 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 98.9 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 98.88 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 98.88 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 98.74 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 98.71 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 98.69 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 98.64 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 98.64 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 98.62 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 98.62 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 98.61 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 98.59 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 98.57 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 98.52 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 98.48 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 98.48 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 98.47 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 98.46 | |
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 98.46 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 98.45 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 98.41 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 98.38 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 98.37 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 98.35 | |
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 98.29 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 98.28 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 98.28 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 98.26 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.25 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 98.21 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 98.17 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 98.13 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 98.12 | |
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 98.06 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 98.05 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 98.04 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 97.96 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 97.94 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 97.94 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 97.88 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 97.86 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 97.8 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 97.74 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 97.72 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 97.72 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 97.69 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 97.65 | |
| TIGR02171 | 912 | Fb_sc_TIGR02171 Fibrobacter succinogenes paralogou | 97.64 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 97.64 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 97.54 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 97.52 | |
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 97.52 | |
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 97.51 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 97.44 | |
| PRK10115 | 686 | protease 2; Provisional | 97.41 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 97.39 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 97.39 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 97.38 | |
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 97.35 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 97.32 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 97.21 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 97.17 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 97.09 | |
| KOG4389 | 601 | consensus Acetylcholinesterase/Butyrylcholinestera | 97.08 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 97.06 | |
| KOG1446 | 311 | consensus Histone H3 (Lys4) methyltransferase comp | 97.06 | |
| KOG2139 | 445 | consensus WD40 repeat protein [General function pr | 97.02 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 97.01 | |
| KOG0293 | 519 | consensus WD40 repeat-containing protein [Function | 96.97 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 96.9 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 96.88 | |
| KOG2315 | 566 | consensus Predicted translation initiation factor | 96.79 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 96.71 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 96.64 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 96.63 | |
| KOG1446 | 311 | consensus Histone H3 (Lys4) methyltransferase comp | 96.54 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 96.53 | |
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 96.52 | |
| KOG0293 | 519 | consensus WD40 repeat-containing protein [Function | 96.51 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 96.47 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 96.44 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 96.41 | |
| KOG2055 | 514 | consensus WD40 repeat protein [General function pr | 96.26 | |
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 96.21 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 96.16 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 95.99 | |
| KOG2139 | 445 | consensus WD40 repeat protein [General function pr | 95.98 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 95.92 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 95.91 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 95.88 | |
| TIGR02171 | 912 | Fb_sc_TIGR02171 Fibrobacter succinogenes paralogou | 95.87 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 95.73 | |
| PTZ00420 | 568 | coronin; Provisional | 95.68 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 95.67 | |
| KOG2394 | 636 | consensus WD40 protein DMR-N9 [General function pr | 95.62 | |
| PTZ00421 | 493 | coronin; Provisional | 95.56 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 95.54 | |
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 95.53 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 95.53 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 95.51 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 95.45 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 95.37 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 95.28 | |
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 95.17 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 95.13 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 95.09 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 95.08 | |
| KOG0973 | 942 | consensus Histone transcription regulator HIRA, WD | 95.04 | |
| KOG2048 | 691 | consensus WD40 repeat protein [General function pr | 94.96 | |
| PLN02209 | 437 | serine carboxypeptidase | 94.96 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 94.92 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 94.9 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 94.88 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 94.85 | |
| KOG4497 | 447 | consensus Uncharacterized conserved protein WDR8, | 94.84 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 94.84 | |
| PTZ00420 | 568 | coronin; Provisional | 94.82 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 94.8 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 94.79 | |
| KOG1407 | 313 | consensus WD40 repeat protein [Function unknown] | 94.77 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 94.72 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 94.67 | |
| PF03283 | 361 | PAE: Pectinacetylesterase | 94.62 | |
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 94.56 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 94.48 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 94.46 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 94.45 | |
| KOG0296 | 399 | consensus Angio-associated migratory cell protein | 94.42 | |
| KOG0318 | 603 | consensus WD40 repeat stress protein/actin interac | 94.38 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 94.3 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 94.27 | |
| KOG4388 | 880 | consensus Hormone-sensitive lipase HSL [Lipid tran | 94.25 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 94.23 | |
| KOG1445 | 1012 | consensus Tumor-specific antigen (contains WD repe | 94.05 | |
| TIGR03712 | 511 | acc_sec_asp2 accessory Sec system protein Asp2. Th | 93.99 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 93.92 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 93.91 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 93.82 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 93.57 | |
| PTZ00421 | 493 | coronin; Provisional | 93.55 | |
| KOG0288 | 459 | consensus WD40 repeat protein TipD [General functi | 93.53 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 93.49 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 93.37 | |
| KOG1274 | 933 | consensus WD40 repeat protein [General function pr | 93.37 | |
| KOG2055 | 514 | consensus WD40 repeat protein [General function pr | 93.29 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 93.28 | |
| KOG2394 | 636 | consensus WD40 protein DMR-N9 [General function pr | 93.24 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 93.23 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 93.08 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 93.0 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 92.89 | |
| KOG2110 | 391 | consensus Uncharacterized conserved protein, conta | 92.85 | |
| KOG0318 | 603 | consensus WD40 repeat stress protein/actin interac | 92.66 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 92.63 | |
| PLN02454 | 414 | triacylglycerol lipase | 92.51 | |
| KOG0772 | 641 | consensus Uncharacterized conserved protein, conta | 92.5 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 92.5 | |
| KOG4497 | 447 | consensus Uncharacterized conserved protein WDR8, | 92.48 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 92.47 | |
| KOG2106 | 626 | consensus Uncharacterized conserved protein, conta | 92.36 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 92.07 | |
| KOG2096 | 420 | consensus WD40 repeat protein [General function pr | 92.05 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 91.98 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 91.88 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 91.81 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 91.38 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 91.19 | |
| PLN02408 | 365 | phospholipase A1 | 91.15 | |
| KOG1273 | 405 | consensus WD40 repeat protein [General function pr | 91.03 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 90.6 | |
| PLN02571 | 413 | triacylglycerol lipase | 90.51 | |
| KOG0643 | 327 | consensus Translation initiation factor 3, subunit | 90.02 | |
| PLN02324 | 415 | triacylglycerol lipase | 89.96 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 89.86 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 89.29 | |
| KOG2110 | 391 | consensus Uncharacterized conserved protein, conta | 89.26 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 89.0 | |
| PLN02802 | 509 | triacylglycerol lipase | 88.87 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 87.89 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 87.4 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 87.09 | |
| PLN00413 | 479 | triacylglycerol lipase | 86.8 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 86.65 | |
| PLN02753 | 531 | triacylglycerol lipase | 86.58 | |
| PLN02310 | 405 | triacylglycerol lipase | 86.46 | |
| PLN02761 | 527 | lipase class 3 family protein | 86.2 | |
| KOG1274 | 933 | consensus WD40 repeat protein [General function pr | 86.19 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 86.14 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 86.12 | |
| KOG1539 | 910 | consensus WD repeat protein [General function pred | 86.03 | |
| KOG1445 | 1012 | consensus Tumor-specific antigen (contains WD repe | 85.92 | |
| KOG1520 | 376 | consensus Predicted alkaloid synthase/Surface muci | 85.56 | |
| PLN02162 | 475 | triacylglycerol lipase | 85.38 | |
| PLN02934 | 515 | triacylglycerol lipase | 85.22 | |
| KOG0645 | 312 | consensus WD40 repeat protein [General function pr | 85.2 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 84.73 | |
| KOG0275 | 508 | consensus Conserved WD40 repeat-containing protein | 84.32 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 84.22 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 83.95 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 83.45 | |
| KOG2919 | 406 | consensus Guanine nucleotide-binding protein [Gene | 83.39 | |
| PLN02719 | 518 | triacylglycerol lipase | 83.22 | |
| KOG0973 | 942 | consensus Histone transcription regulator HIRA, WD | 83.0 | |
| KOG2096 | 420 | consensus WD40 repeat protein [General function pr | 82.77 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 82.67 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 82.59 | |
| KOG4499 | 310 | consensus Ca2+-binding protein Regucalcin/SMP30 [I | 82.56 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 82.55 | |
| KOG2314 | 698 | consensus Translation initiation factor 3, subunit | 81.88 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 80.95 |
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-45 Score=373.71 Aligned_cols=434 Identities=23% Similarity=0.256 Sum_probs=305.5
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeec---cceEEEEEcCCCCCCCceEeeeccccccc
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT---SQTRTWLVCPGSKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~---~~~~~~~~~~~~g~~~~~~lt~~~~~~~~ 92 (494)
.+.++|+++. ++ ....+...+.....+.|.+|++.++....... .-...++.....+ ....++......
T Consensus 147 ~~~~l~~~d~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-- 218 (620)
T COG1506 147 ERSDLYVVDI---ES-KLIKLGLGNLDVVSFATDGDGRLVASIRLDDDADPWVTNLYVLIEGNG--ELESLTPGEGSI-- 218 (620)
T ss_pred cccceEEEcc---Cc-ccccccCCCCceeeeeeCCCCceeEEeeeccccCCceEeeEEEecCCC--ceEEEcCCCcee--
Confidence 5668999988 54 55566666666677778888887777664321 1122222222333 666666655443
Q ss_pred CCCCCCceeeCCCCCEEEEEEeccCc---cce-EEEEc-cCCCCCC-----C------------CCCceEeeecC-CCce
Q 011049 93 SDPGSPMMTRTSTGTNVIAKIKKEND---EQI-YILLN-GRGFTPE-----G------------NIPFLDLFDIN-TGSK 149 (494)
Q Consensus 93 ~~~~~~~~~~spDG~~i~~~~~~~~~---~~~-~~~~~-~~g~~~~-----~------------~~~~l~~~d~~-~g~~ 149 (494)
..+. +.+||+.+++....... ... .+.+. ..+.... + ....++.+-.. .|..
T Consensus 219 ---~~~~--~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 293 (620)
T COG1506 219 ---SKLA--FDADGKSIALLGTESDRGLAEGDFILLLDGELGEVDGDLSSGDDTRGAWAVEGGLDGDGLLFIATDGGGSS 293 (620)
T ss_pred ---eeee--eCCCCCeeEEeccCCccCccccceEEEEeccccccceeeccCCcccCcHHhccccCCCcEEEEEecCCCce
Confidence 3334 79999988887754331 111 11111 1111000 0 00001111111 1111
Q ss_pred EEEEeeCcchhhhheeeeccC-CCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecCCC-CCCcccccccEEE
Q 011049 150 ERIWESNREKYFETAVALVFG-QGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPH-PYPTLASLQKEMI 227 (494)
Q Consensus 150 ~~l~~~~~~~~~~~~~~~~s~-~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~~~-~~~~~~~~~~~~~ 227 (494)
..+...... ......... ..-..|+.+++.+++..+++..|+++|+++. ++..+++..+. ........++|.+
T Consensus 294 ~l~~~~~~~---~~~~~~~~~~~~v~~f~~~~~~~~~~~s~~~~p~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~e~~ 368 (620)
T COG1506 294 PLFRVDDLG---GGVEGLSGDDGGVPGFDVDGRKLALAYSSPTEPPEIYLYDR--GEEAKLTSSNNSGLKKVKLAEPEPV 368 (620)
T ss_pred EEEEEeccC---CceeeecCCCceEEEEeeCCCEEEEEecCCCCccceEEEcC--CCceEEeecccccccccccCCceEE
Confidence 111111000 000000011 1224666788999999999999999999986 34444554433 3445566789999
Q ss_pred EEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC
Q 011049 228 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 307 (494)
Q Consensus 228 ~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~ 307 (494)
++++.||.++++++++|+++++.++ +|+||++||||... .. + ......+.|+++||+|+.+|+||
T Consensus 369 ~~~~~dG~~i~~~l~~P~~~~~~k~--yP~i~~~hGGP~~~------~~-----~--~~~~~~q~~~~~G~~V~~~n~RG 433 (620)
T COG1506 369 TYKSNDGETIHGWLYKPPGFDPRKK--YPLIVYIHGGPSAQ------VG-----Y--SFNPEIQVLASAGYAVLAPNYRG 433 (620)
T ss_pred EEEcCCCCEEEEEEecCCCCCCCCC--CCEEEEeCCCCccc------cc-----c--ccchhhHHHhcCCeEEEEeCCCC
Confidence 9999999999999999999988776 99999999998432 11 1 12356779999999999999999
Q ss_pred CCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC
Q 011049 308 IIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT 384 (494)
Q Consensus 308 ~~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~ 384 (494)
+.|+|.++.. ..++....+|+.++++++.+.+.+|++||+|+|+||||||+++++++.| +|+|+++..+.+++...
T Consensus 434 S~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~ 512 (620)
T COG1506 434 STGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLY 512 (620)
T ss_pred CCccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhh
Confidence 9999988654 3445567999999999999999999999999999999999999999996 89999999988775443
Q ss_pred CCCcccc--------cccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcC
Q 011049 385 PFGFQTE--------FRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLP 456 (494)
Q Consensus 385 ~~~~~~~--------~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~ 456 (494)
....... ...+|.+.+.|.+.||+.+++++++|+|+|||++|.+|| .+|+++|+++|+.+|+++++++||
T Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~--~~q~~~~~~aL~~~g~~~~~~~~p 590 (620)
T COG1506 513 FGESTEGLRFDPEENGGGPPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVP--IEQAEQLVDALKRKGKPVELVVFP 590 (620)
T ss_pred ccccchhhcCCHHHhCCCcccChHHHHhcChhhhhcccCCCEEEEeecCCccCC--hHHHHHHHHHHHHcCceEEEEEeC
Confidence 3222111 112222678899999999999999999999999999998 999999999999999999999999
Q ss_pred CCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 457 FEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 457 ~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
+++|++..+++....+.++++||++|++.
T Consensus 591 ~e~H~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 591 DEGHGFSRPENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred CCCcCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 99999998888999999999999999875
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-43 Score=357.85 Aligned_cols=438 Identities=17% Similarity=0.157 Sum_probs=299.3
Q ss_pred eeeeccCCCCCCCC--CeeccccccccccceecCCCceEEEEeeee--ccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 19 IIYTQPAEPAEGEK--PEILHKLDLRFRSVSWCDDSLALVNETWYK--TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 19 ~i~~~~~~~~~~~~--~~~lt~~~~~~~~p~wspDg~~i~f~~~~~--~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
+|+++++ ++|. +..+.... ....|++||+.|+|++... .+..++|++++.++..+.+.|+.+.....+
T Consensus 154 ~l~v~d~---~tg~~l~~~i~~~~---~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~-- 225 (686)
T PRK10115 154 GIRFRNL---ETGNWYPELLDNVE---PSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFY-- 225 (686)
T ss_pred EEEEEEC---CCCCCCCccccCcc---eEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEE--
Confidence 6888888 6676 44444432 4589999999999998742 246899999999874466777775433211
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccc-------------------------------eEEEEccCCCCCCCCCCceEeee
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQ-------------------------------IYILLNGRGFTPEGNIPFLDLFD 143 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~-------------------------------~~~~~~~~g~~~~~~~~~l~~~d 143 (494)
.....+.||+++++.+....... ..+++..+.. ..+..|..++
T Consensus 226 ---~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~tn~~---~~~~~l~~~~ 299 (686)
T PRK10115 226 ---VSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLDHYQHRFYLRSNRH---GKNFGLYRTR 299 (686)
T ss_pred ---EEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEEeCCCEEEEEEcCC---CCCceEEEec
Confidence 01112448877765443221100 1122211111 1122355555
Q ss_pred cC-CCceEEEEee-Ccc-----hhhhh------------eeeeccCC-------------Cc--cccc--ccCcEEEEEE
Q 011049 144 IN-TGSKERIWES-NRE-----KYFET------------AVALVFGQ-------------GE--EDIN--LNQLKILTSK 187 (494)
Q Consensus 144 ~~-~g~~~~l~~~-~~~-----~~~~~------------~~~~~s~~-------------~~--~~~s--~d~~~~~~~~ 187 (494)
+. .++.+.+... +.. ..+.. .+.++... .. ..++ +++..+++..
T Consensus 300 ~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (686)
T PRK10115 300 VRDEQQWEELIPPRENIMLEGFTLFTDWLVVEERQRGLTSLRQINRKTREVIGIAFDDPAYVTWIAYNPEPETSRLRYGY 379 (686)
T ss_pred CCCcccCeEEECCCCCCEEEEEEEECCEEEEEEEeCCEEEEEEEcCCCCceEEecCCCCceEeeecccCCCCCceEEEEE
Confidence 55 3333333322 110 00000 00011100 00 1123 4567899999
Q ss_pred ecCCCCCeEEEEEcCCCceeEeecCCCCCCcccccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcC
Q 011049 188 ESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYK 267 (494)
Q Consensus 188 ~s~~~p~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~ 267 (494)
+++..|+++|.++.++++.+.|+..+.+......+.+|.+++++.||.+|+++++++++... .++.|+||++|||+..
T Consensus 380 ss~~~P~~~y~~d~~~~~~~~l~~~~~~~~~~~~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~--~~~~P~ll~~hGg~~~ 457 (686)
T PRK10115 380 SSMTTPDTLFELDMDTGERRVLKQTEVPGFDAANYRSEHLWITARDGVEVPVSLVYHRKHFR--KGHNPLLVYGYGSYGA 457 (686)
T ss_pred ecCCCCCEEEEEECCCCcEEEEEecCCCCcCccccEEEEEEEECCCCCEEEEEEEEECCCCC--CCCCCEEEEEECCCCC
Confidence 99999999999999888878887665432223356899999999999999997777554322 2347999999998743
Q ss_pred CcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCch---hHHHHHHHHHHHHHHHHHcCCCCCC
Q 011049 268 SKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDR---FVEQLVSSAEAAVEEVVRRGVADPS 344 (494)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~---~~~~~~~d~~~~v~~l~~~~~~d~~ 344 (494)
+..+ .| ....+.|+++||+|+.++.||+.|+|..+.... +....++|+++++++|++++++|++
T Consensus 458 ~~~p---------~f----~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~ 524 (686)
T PRK10115 458 SIDA---------DF----SFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPS 524 (686)
T ss_pred CCCC---------Cc----cHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChH
Confidence 3211 12 235568999999999999999999998754421 1225689999999999999999999
Q ss_pred cEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC------C--CCccccccccccc--HHHHHhcCccccccCC
Q 011049 345 RIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT------P--FGFQTEFRTLWEA--TNVYIEMSPITHANKI 414 (494)
Q Consensus 345 ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~------~--~~~~~~~~~~~~~--~~~~~~~sp~~~~~~~ 414 (494)
|++|+|.|+||+++.++++++|++|+|+|+..|++|.... + +....+.+.+++. .+.+.+.||+.+++++
T Consensus 525 rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~~~~~~~e~G~p~~~~~~~~l~~~SP~~~v~~~ 604 (686)
T PRK10115 525 LCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQ 604 (686)
T ss_pred HeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCCChhHHHHhCCCCCHHHHHHHHHcCchhccCcc
Confidence 9999999999999999999999999999999999985321 1 1122344566532 3445679999999999
Q ss_pred CCC-EEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEc---CCCCCccCCcccHH---HHHHHHHHHHHHhcCCCC
Q 011049 415 KKP-ILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLL---PFEHHVYAARENVM---HVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 415 ~~P-~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~---~~~~H~~~~~~~~~---~~~~~~~~fl~~~l~~~~ 487 (494)
+.| +|++||++|++|| +.|+.+++++|++++++++++++ +++||+.. .++. ........|+...+....
T Consensus 605 ~~P~lLi~~g~~D~RV~--~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~--~~r~~~~~~~A~~~aFl~~~~~~~~ 680 (686)
T PRK10115 605 AYPHLLVTTGLHDSQVQ--YWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGK--SGRFKSYEGVAMEYAFLIALAQGTL 680 (686)
T ss_pred CCCceeEEecCCCCCcC--chHHHHHHHHHHhcCCCCceEEEEecCCCCCCCC--cCHHHHHHHHHHHHHHHHHHhCCcC
Confidence 999 6778999999998 99999999999999999888888 99999843 3333 344556899999888765
Q ss_pred CC
Q 011049 488 SD 489 (494)
Q Consensus 488 ~~ 489 (494)
..
T Consensus 681 ~~ 682 (686)
T PRK10115 681 PA 682 (686)
T ss_pred CC
Confidence 44
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=275.23 Aligned_cols=320 Identities=19% Similarity=0.244 Sum_probs=247.9
Q ss_pred CceEeeecC-CCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEee----c
Q 011049 137 PFLDLFDIN-TGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQIT----N 211 (494)
Q Consensus 137 ~~l~~~d~~-~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt----~ 211 (494)
.+||++..+ .|+..+++...=. ....++.+-+.++..+++...|+++..+.+.+.+...+. .
T Consensus 530 ~hLyvvsye~~g~~~rlt~~g~s-------------h~~~l~~~~d~fv~~~~sv~sP~cv~~y~ls~~~~~~l~~q~~~ 596 (867)
T KOG2281|consen 530 HHLYVVSYENPGEIARLTEPGYS-------------HSCELDQQCDHFVSYYSSVGSPPCVSLYSLSWPENDPLPKQVSF 596 (867)
T ss_pred eeEEEEEEecCCceeeccCCCcc-------------cchhhhhhhhhHhhhhhcCCCCceEEEEeccCCccCcccchhhH
Confidence 368998887 7888887764311 112345555556666777788888766665443322221 0
Q ss_pred ---CCC-CCCcccccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCc
Q 011049 212 ---FPH-PYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTP 287 (494)
Q Consensus 212 ---~~~-~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~ 287 (494)
+.. ..+...-.+.|.+.|.+..|..+.+.+|.|.+++++++ +|++++++|||.- |+. .+.|.+...
T Consensus 597 ~~~l~~~~~~~Pdy~p~eif~fqs~tg~~lYgmiyKPhn~~pgkk--Yptvl~VYGGP~V------QlV--nnsfkgi~y 666 (867)
T KOG2281|consen 597 WAILVSGAPPPPDYVPPEIFSFQSKTGLTLYGMIYKPHNFQPGKK--YPTVLNVYGGPGV------QLV--NNSFKGIQY 666 (867)
T ss_pred HHHHHhcCCCCCccCChhheeeecCCCcEEEEEEEccccCCCCCC--CceEEEEcCCCce------EEe--eccccceeh
Confidence 001 11122223458899999889999999999999999987 9999999999721 222 244665555
Q ss_pred hhHHHHHhCCeEEEeCCCCCCCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcC-CCCCCcEEEEecChHHHHHHHHHH
Q 011049 288 TSSLIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRG-VADPSRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 288 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~-~~d~~ri~i~G~S~GG~~a~~~~~ 363 (494)
.....|+++||.|+..|.||+.-+|.++.. .+.+.-.++|...++++|.++. ++|.+||+|.|||||||+++++++
T Consensus 667 lR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~ 746 (867)
T KOG2281|consen 667 LRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLA 746 (867)
T ss_pred hhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhh
Confidence 556688999999999999988877776432 2223345789999999999984 899999999999999999999999
Q ss_pred hCCCceeEEEeCCCCCCCCCCCCCccccc-ccccccHHHHHhcCccccccCCC---CCEEEEecCCCCCCCCCHHHHHHH
Q 011049 364 HAPHLFCCGIARSGSYNKTLTPFGFQTEF-RTLWEATNVYIEMSPITHANKIK---KPILIIHGEVDDKVGLFPMQAERF 439 (494)
Q Consensus 364 ~~p~~~~a~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~sp~~~~~~~~---~P~li~~G~~D~~v~~~~~~~~~~ 439 (494)
++|+.|+++|+.+|+++|....-++.... +.|..+...|...|...++.++. ..+|++||--|.+|+ +.+...+
T Consensus 747 ~~P~IfrvAIAGapVT~W~~YDTgYTERYMg~P~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVH--F~Hts~L 824 (867)
T KOG2281|consen 747 QYPNIFRVAIAGAPVTDWRLYDTGYTERYMGYPDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVH--FAHTSRL 824 (867)
T ss_pred cCcceeeEEeccCcceeeeeecccchhhhcCCCccchhcccchhHHHHHhhCCCCCceEEEEecccccchh--hhhHHHH
Confidence 99999999999999999887776665543 44556777888888888888874 459999999999998 9999999
Q ss_pred HHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 440 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 440 ~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
+.+|.++|++.++++||++.|++...+....+-.+++.|+++
T Consensus 825 vs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 825 VSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred HHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 999999999999999999999999888888888889999876
|
|
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-32 Score=275.69 Aligned_cols=392 Identities=22% Similarity=0.240 Sum_probs=267.9
Q ss_pred ceecCCCceEEEEee-eeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEE
Q 011049 46 VSWCDDSLALVNETW-YKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYIL 124 (494)
Q Consensus 46 p~wspDg~~i~f~~~-~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~ 124 (494)
|.++.|+....+... .++....+..+....+. +++.+|...-... . ++.++.|..+++|....
T Consensus 345 ~~~~~d~~~~~~~~~~~~~~~~hi~~~~~~~~~-~~~~lt~g~w~v~----~--i~~~~~~~~~i~f~~~~--------- 408 (755)
T KOG2100|consen 345 PVFSSDGSSYLKVDSVSDGGYNHIAYLKLSNGS-EPRMLTSGNWEVT----S--ILGYDKDSNRIYFDAYE--------- 408 (755)
T ss_pred ceEeecCCceeEEEeeccCCEEEEEEEEcCCCC-ccccccccceEEE----E--eccccCCCceEEEEecC---------
Confidence 566666644333322 22113445555544432 4444554433221 0 11145677777776532
Q ss_pred EccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCe-EEEEEcCC
Q 011049 125 LNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQ-YHILSWPL 203 (494)
Q Consensus 125 ~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~-l~~~~~~~ 203 (494)
......+|+.+++.++..+.++..... ..... .+.++++..+.++..+..+..|.. +-....+.
T Consensus 409 -------~~~~~~~ly~i~~~~~~~~~lt~~~~~----~~~~~----~~~~~~~~~~~~v~~~~gP~~p~~~~~~~~~~~ 473 (755)
T KOG2100|consen 409 -------EDPSERHLYSISLGSGTVESLTCSLIT----GPCTY----LSVSFSKSAKYYVLSCSGPKVPDGQLTRHSSKN 473 (755)
T ss_pred -------CCCCceEEEEEEccccccccccccCCC----CcceE----EEEecCCcccEEEEEccCCCCCcceeecccccc
Confidence 112345799999888776666554431 00001 123556666778887777776643 22222221
Q ss_pred Cc-eeEeecCCCCCCc----ccccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCC
Q 011049 204 KK-SSQITNFPHPYPT----LASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGS 278 (494)
Q Consensus 204 ~~-~~~lt~~~~~~~~----~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~ 278 (494)
.+ ...|. .+..... ...+..+..++.. ||....+.+++|+++++.++ +|+||.+||||.+ +++...
T Consensus 474 ~~~~~~Le-~n~~~~~~~~~~~~p~~~~~~i~~-~~~~~~~~~~lP~~~~~~~k--yPllv~~yGGP~s-----q~v~~~ 544 (755)
T KOG2100|consen 474 SKTIVVLE-TNEELKKTIENVALPIVEFGKIEI-DGITANAILILPPNFDPSKK--YPLLVVVYGGPGS-----QSVTSK 544 (755)
T ss_pred ceEEEEec-cChhhHHHhhcccCCcceeEEEEe-ccEEEEEEEecCCCCCCCCC--CCEEEEecCCCCc-----ceeeee
Confidence 11 22222 2222211 1122333334443 89999999999999998875 9999999999842 122211
Q ss_pred CCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHH
Q 011049 279 PNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGA 355 (494)
Q Consensus 279 ~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG 355 (494)
+. ..+....+..+|++|+.+|+||+.|+|.+... .+.+...++|+..+++++.+++++|++||+|+||||||
T Consensus 545 ---~~--~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGG 619 (755)
T KOG2100|consen 545 ---FS--VDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGG 619 (755)
T ss_pred ---EE--ecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHH
Confidence 11 11233356789999999999999999987533 34455679999999999999999999999999999999
Q ss_pred HHHHHHHHhCC-CceeEEEeCCCCCCCCCCCCCccccc-ccccccHHHHHhcCccccccCCCCCE-EEEecCCCCCCCCC
Q 011049 356 FMTAHLLAHAP-HLFCCGIARSGSYNKTLTPFGFQTEF-RTLWEATNVYIEMSPITHANKIKKPI-LIIHGEVDDKVGLF 432 (494)
Q Consensus 356 ~~a~~~~~~~p-~~~~a~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~sp~~~~~~~~~P~-li~~G~~D~~v~~~ 432 (494)
|++++++.++| +.|+|+++++|++|+.+....+..+. +.++++...|.+.++..++.+++.|. |++||+.|.+|+
T Consensus 620 y~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~~terymg~p~~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh-- 697 (755)
T KOG2100|consen 620 YLTLKLLESDPGDVFKCGVAVAPVTDWLYYDSTYTERYMGLPSENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVH-- 697 (755)
T ss_pred HHHHHHhhhCcCceEEEEEEecceeeeeeecccccHhhcCCCccccchhhhccccchhhhhccCCEEEEEcCCcCCcC--
Confidence 99999999998 89999999999999874333333332 44566666799999999999998776 999999999998
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 433 PMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 433 ~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
++|+.+++++|+.+|+++++++||+++|++.......+.+..+..||..++.
T Consensus 698 ~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~ 749 (755)
T KOG2100|consen 698 FQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFG 749 (755)
T ss_pred HHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999878778999999999995544
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.5e-32 Score=242.85 Aligned_cols=196 Identities=28% Similarity=0.441 Sum_probs=166.3
Q ss_pred hhHHHHHhCCeEEEeCCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 288 TSSLIFLARRFAVLAGPSIPIIGEGDKLP---NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 288 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~---~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
...+.|+++||+|+.+++|++.|+|..+. ...+....++|+.+++++|++++.+|++||+|+|+|+||++++.++.+
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~ 84 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ 84 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcc
Confidence 45678899999999999999999887632 344556779999999999999999999999999999999999999999
Q ss_pred CCCceeEEEeCCCCCCCCCCCCC---ccc----ccccccccHHHHHhcCccccccC--CCCCEEEEecCCCCCCCCCHHH
Q 011049 365 APHLFCCGIARSGSYNKTLTPFG---FQT----EFRTLWEATNVYIEMSPITHANK--IKKPILIIHGEVDDKVGLFPMQ 435 (494)
Q Consensus 365 ~p~~~~a~v~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~sp~~~~~~--~~~P~li~~G~~D~~v~~~~~~ 435 (494)
+|++|+++|+.+|+++....... +.. +...++...+.|...+|+..+.+ +++|+||+||++|.+|| +.+
T Consensus 85 ~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp--~~~ 162 (213)
T PF00326_consen 85 HPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQIKPPVLIIHGENDPRVP--PSQ 162 (213)
T ss_dssp TCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSST--THH
T ss_pred cceeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccccCCCCEEEEccCCCCccC--HHH
Confidence 99999999999999886443211 111 12445567888999999999999 88999999999999998 999
Q ss_pred HHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 436 AERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 436 ~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
+.+++++|+++|+++++++||+++|++...+.....++++++||+++|++
T Consensus 163 s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 163 SLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLKK 212 (213)
T ss_dssp HHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999988788889999999999999986
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.2e-28 Score=230.18 Aligned_cols=285 Identities=19% Similarity=0.159 Sum_probs=209.9
Q ss_pred ccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCCC-CcccccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCc
Q 011049 178 LNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPY-PTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLP 256 (494)
Q Consensus 178 ~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~~~~~-~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P 256 (494)
++...+.+..+|.++|.+++-+|+.+++.+.|.....+. -....+.++++..+..||+.|+..|+.-+++. ..++.|
T Consensus 372 ~~s~~lR~~ysS~ttP~~~~~~dm~t~er~~LkqqeV~~g~dp~~Y~s~riwa~a~dgv~VPVSLvyrkd~~--~~g~~p 449 (682)
T COG1770 372 FDSDRLRYSYSSMTTPATLFDYDMATGERTLLKQQEVPGGFDPEDYVSRRIWATADDGVQVPVSLVYRKDTK--LDGSAP 449 (682)
T ss_pred CCCccEEEEeecccccceeEEeeccCCcEEEEEeccCCCCCChhHeEEEEEEEEcCCCcEeeEEEEEecccC--CCCCCc
Confidence 456789999999999999999999999998887655443 34456789999999999999999999988743 356689
Q ss_pred EEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHH--------HHHHHH
Q 011049 257 CLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVE--------QLVSSA 328 (494)
Q Consensus 257 ~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~--------~~~~d~ 328 (494)
++++.||....+.++ .|+ .....|+.||++.....-||. .+.+..|.+ ..++|+
T Consensus 450 ~lLygYGaYG~s~~p---------~Fs----~~~lSLlDRGfiyAIAHVRGG-----gelG~~WYe~GK~l~K~NTf~DF 511 (682)
T COG1770 450 LLLYGYGAYGISMDP---------SFS----IARLSLLDRGFVYAIAHVRGG-----GELGRAWYEDGKLLNKKNTFTDF 511 (682)
T ss_pred EEEEEeccccccCCc---------Ccc----cceeeeecCceEEEEEEeecc-----cccChHHHHhhhhhhccccHHHH
Confidence 999999976443322 233 234467899987655333332 223333333 237899
Q ss_pred HHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC----CCCCccccccccccc---H--
Q 011049 329 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL----TPFGFQTEFRTLWEA---T-- 399 (494)
Q Consensus 329 ~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~----~~~~~~~~~~~~~~~---~-- 399 (494)
+++.++|+++++.++++|+++|.|+||++...++...|++|+++|+..|+.|... ....+.......|.+ +
T Consensus 512 Ia~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~EWGNP~d~e~ 591 (682)
T COG1770 512 IAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDEWGNPLDPEY 591 (682)
T ss_pred HHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCCCccchhhhCCcCCHHH
Confidence 9999999999999999999999999999999999999999999999999987321 111112222223333 2
Q ss_pred -HHHHhcCccccccCCC-CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCC---cEEEEEcCCCCCcc-CCcccHHHHHH
Q 011049 400 -NVYIEMSPITHANKIK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHGA---LSRLVLLPFEHHVY-AARENVMHVIW 473 (494)
Q Consensus 400 -~~~~~~sp~~~~~~~~-~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~---~~~~~~~~~~~H~~-~~~~~~~~~~~ 473 (494)
+.+..+||..++..-. +|+|++.|.+|++|. +.+..+++++|+..+. ++-+.+--++||+- +......+...
T Consensus 592 y~yikSYSPYdNV~a~~YP~ilv~~Gl~D~rV~--YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG~SgRf~~lee~A 669 (682)
T COG1770 592 YDYIKSYSPYDNVEAQPYPAILVTTGLNDPRVQ--YWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGASGRFQRLEEIA 669 (682)
T ss_pred HHHHhhcCchhccccCCCCceEEEccccCCccc--cchHHHHHHHHhhcccCCCcEEEEecccccCCCCCCchHHHHHHH
Confidence 3456789999988765 779999999999998 9999999999998753 45666667899974 33333333334
Q ss_pred HHHHHHHHhcC
Q 011049 474 ETDRWLQKYCL 484 (494)
Q Consensus 474 ~~~~fl~~~l~ 484 (494)
.-..|+.+.+.
T Consensus 670 ~eYaF~l~~~~ 680 (682)
T COG1770 670 FEYAFLLKLAG 680 (682)
T ss_pred HHHHHHhhhcc
Confidence 44667666543
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-24 Score=206.42 Aligned_cols=290 Identities=20% Similarity=0.194 Sum_probs=211.6
Q ss_pred cCcEEEEEEecCCCCCeEEEEEcCCCce----eEeecCCCCCCcccccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCC
Q 011049 179 NQLKILTSKESKTEITQYHILSWPLKKS----SQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGP 254 (494)
Q Consensus 179 d~~~~~~~~~s~~~p~~l~~~~~~~~~~----~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~ 254 (494)
+...+.|+.+|+..|+.||.+|+..++. .+-...+.+....+.++++++.+++.||+.|+..+++-+.. +..++
T Consensus 392 ~~~~~~f~~sS~l~P~~iy~yDl~~~~~e~~vf~e~~~~lpg~~~s~y~~~r~~~~SkDGt~VPM~Iv~kk~~--k~dg~ 469 (712)
T KOG2237|consen 392 KSSTIRFQFSSFLTPGSIYDYDLANGKPEPSVFREITVVLPGFDASDYVVERIEVSSKDGTKVPMFIVYKKDI--KLDGS 469 (712)
T ss_pred CCceEEEEEeccCCCCeEEEeeccCCCCCCcceeeeccccCcccccceEEEEEEEecCCCCccceEEEEechh--hhcCC
Confidence 3467889999999999999999987732 11122222333445568999999999999999999995543 23456
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchh---HHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRF---VEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~---~~~~~~d~~~~ 331 (494)
.|++++.||+...+..+ .|. .....|..+|++....+-||..++|.++..... -.+.++|++++
T Consensus 470 ~P~LLygYGay~isl~p---------~f~----~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~ 536 (712)
T KOG2237|consen 470 KPLLLYGYGAYGISLDP---------SFR----ASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIAC 536 (712)
T ss_pred CceEEEEecccceeecc---------ccc----cceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHH
Confidence 89999999986332221 132 223356779999888888888788887654222 23458999999
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC----CCCcccccccccccH---HHHHh
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT----PFGFQTEFRTLWEAT---NVYIE 404 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~----~~~~~~~~~~~~~~~---~~~~~ 404 (494)
++||++++++.++++++.|.|.||.++..++.++|++|+|+|+..|+.|...+ ......+.-..|.++ +.+..
T Consensus 537 AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilplt~sd~ee~g~p~~~~~~~~ 616 (712)
T KOG2237|consen 537 AEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPLTTSDYEEWGNPEDFEDLIK 616 (712)
T ss_pred HHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccccchhhhcccCChhhhhhhhe
Confidence 99999999999999999999999999999999999999999999999883211 111122222233333 45556
Q ss_pred cCccccccCCC-----CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC-------CcEEEEEcCCCCCccCCccc-HHHH
Q 011049 405 MSPITHANKIK-----KPILIIHGEVDDKVGLFPMQAERFFDALKGHG-------ALSRLVLLPFEHHVYAAREN-VMHV 471 (494)
Q Consensus 405 ~sp~~~~~~~~-----~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g-------~~~~~~~~~~~~H~~~~~~~-~~~~ 471 (494)
.+|+...++++ +-+|+..+.+|.||+ +.++..+.++|+..- .++-+.+..++||+...... +.+.
T Consensus 617 i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~--~~~~~K~vAklre~~~~~~~q~~pvll~i~~~agH~~~~~~~k~~~E 694 (712)
T KOG2237|consen 617 ISPYSPVDNIKKQVQYPSMLVTTADHDDRVG--PLESLKWVAKLREATCDSLKQTNPVLLRIETKAGHGAEKPRFKQIEE 694 (712)
T ss_pred ecccCccCCCchhccCcceEEeeccCCCccc--ccchHHHHHHHHHHhhcchhcCCCEEEEEecCCccccCCchHHHHHH
Confidence 66666666653 448999999999998 999999999998642 45788899999998764332 2344
Q ss_pred HHHHHHHHHHhcCC
Q 011049 472 IWETDRWLQKYCLS 485 (494)
Q Consensus 472 ~~~~~~fl~~~l~~ 485 (494)
.....+||.+.+..
T Consensus 695 ~a~~yaFl~K~~~~ 708 (712)
T KOG2237|consen 695 AAFRYAFLAKMLNS 708 (712)
T ss_pred HHHHHHHHHHHhcC
Confidence 55678888887753
|
|
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.2e-26 Score=214.10 Aligned_cols=290 Identities=19% Similarity=0.201 Sum_probs=225.5
Q ss_pred cccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCCCCcccccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCC
Q 011049 175 DINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGP 254 (494)
Q Consensus 175 ~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~ 254 (494)
+-+.++..+++...+...|+.+|+.+..+.+.+.+...... -+...+.+|....+|.||++|+++++. ++.+.. +
T Consensus 346 ~~~~~g~ev~l~~t~F~tP~~~~r~~~~~~eLe~ik~~p~~-FDa~~~~veQ~~atSkDGT~IPYFiv~-K~~~~d---~ 420 (648)
T COG1505 346 SADKDGDEVFLAFTSFTTPSTLYRLDLFGGELEVIREQPVQ-FDADNYEVEQFFATSKDGTRIPYFIVR-KGAKKD---E 420 (648)
T ss_pred cCCCCCcEEEEEeecccCCCceEEEecCCceehhhhhccCC-cCccCceEEEEEEEcCCCccccEEEEe-cCCcCC---C
Confidence 33456788888899999999999999988887766544322 234567889999999999999999999 765433 4
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchh---HHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRF---VEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~---~~~~~~d~~~~ 331 (494)
.|++|+.|||.. +.-.|. |++ ....|+++|.+.+..|-||...+|..+..... -...++|..++
T Consensus 421 ~pTll~aYGGF~--------vsltP~-fs~----~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AV 487 (648)
T COG1505 421 NPTLLYAYGGFN--------ISLTPR-FSG----SRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAV 487 (648)
T ss_pred CceEEEeccccc--------cccCCc-cch----hhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHH
Confidence 799999999862 222221 332 23578899988777777777667766443222 23568999999
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC-----CCCCccccccccc--ccHHHHHh
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL-----TPFGFQTEFRTLW--EATNVYIE 404 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~-----~~~~~~~~~~~~~--~~~~~~~~ 404 (494)
.+.|+++++..|++++|.|.|.||.++..+++++|++|.|+|+..|+.|+.- ..+.+..+.+.|- ++...+.+
T Consensus 488 aedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~l~aG~sW~~EYG~Pd~P~d~~~l~~ 567 (648)
T COG1505 488 AEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHLLTAGSSWIAEYGNPDDPEDRAFLLA 567 (648)
T ss_pred HHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhcccccchhhHhhcCCCCCHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999998532 2233444444442 34456788
Q ss_pred cCccccccC-CC-CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccH-HHHHHHHHHHHHH
Q 011049 405 MSPITHANK-IK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENV-MHVIWETDRWLQK 481 (494)
Q Consensus 405 ~sp~~~~~~-~~-~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~-~~~~~~~~~fl~~ 481 (494)
+||+.+++. .+ +|+||..+.+|.+|+ +.++++|+.+|++.+.++-+.+-.+.||+-...... ......+..||.+
T Consensus 568 YSPy~nl~~g~kYP~~LITTs~~DDRVH--PaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r 645 (648)
T COG1505 568 YSPYHNLKPGQKYPPTLITTSLHDDRVH--PAHARKFAAKLQEVGAPVLLREETKGGHGGAAPTAEIARELADLLAFLLR 645 (648)
T ss_pred cCchhcCCccccCCCeEEEccccccccc--chHHHHHHHHHHhcCCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHH
Confidence 999999887 33 889999999999998 999999999999999999998888999987654443 3455667889988
Q ss_pred hcC
Q 011049 482 YCL 484 (494)
Q Consensus 482 ~l~ 484 (494)
.|.
T Consensus 646 ~L~ 648 (648)
T COG1505 646 TLG 648 (648)
T ss_pred hhC
Confidence 764
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.2e-22 Score=183.92 Aligned_cols=240 Identities=23% Similarity=0.249 Sum_probs=154.6
Q ss_pred ccEEEEEEc-CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 223 QKEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 223 ~~~~~~~~~-~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
..+.+++.| .-|.++++.+|+|+.. ++ .++|+|+++||.+. +...|.... .....+...||+|+
T Consensus 17 ~~~~~~~~s~~l~~~~~~~vy~P~~~-~~--~~~Pvv~~lHG~~~-----------~~~~~~~~~-~~~~~~~~~g~~Vv 81 (283)
T PLN02442 17 FNRRYKHFSSTLGCSMTFSVYFPPAS-DS--GKVPVLYWLSGLTC-----------TDENFIQKS-GAQRAAAARGIALV 81 (283)
T ss_pred EEEEEEEeccccCCceEEEEEcCCcc-cC--CCCCEEEEecCCCc-----------ChHHHHHhh-hHHHHHhhcCeEEE
Confidence 455666665 3567999999999842 22 34999999999642 111221111 12234567899999
Q ss_pred eCCCCCCC------------CCCCCC----C-----CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHH
Q 011049 302 AGPSIPII------------GEGDKL----P-----NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAH 360 (494)
Q Consensus 302 ~~~~~~~~------------g~g~~~----~-----~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~ 360 (494)
+++..... +.+.+. . ...+.....+++...++...+ .+|+++++|+|+|+||++++.
T Consensus 82 ~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~--~~~~~~~~i~G~S~GG~~a~~ 159 (283)
T PLN02442 82 APDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFD--QLDTSRASIFGHSMGGHGALT 159 (283)
T ss_pred ecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHH--hcCCCceEEEEEChhHHHHHH
Confidence 97753210 111110 0 011223334444444443332 268899999999999999999
Q ss_pred HHHhCCCceeEEEeCCCCCCCCCCCCCcc---cccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHH-HH
Q 011049 361 LLAHAPHLFCCGIARSGSYNKTLTPFGFQ---TEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPM-QA 436 (494)
Q Consensus 361 ~~~~~p~~~~a~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~-~~ 436 (494)
++.++|++|+++++.+|+.+.....+... ...+......+.+...+++..+.+.++|+|++||++|..++ .. ++
T Consensus 160 ~a~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~--~~~~s 237 (283)
T PLN02442 160 IYLKNPDKYKSVSAFAPIANPINCPWGQKAFTNYLGSDKADWEEYDATELVSKFNDVSATILIDQGEADKFLK--EQLLP 237 (283)
T ss_pred HHHhCchhEEEEEEECCccCcccCchhhHHHHHHcCCChhhHHHcChhhhhhhccccCCCEEEEECCCCcccc--ccccH
Confidence 99999999999999999877432222111 01111111222333344455565678999999999999986 53 57
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 437 ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 437 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
+.+++++++.|.+++++++|+++|.+. ....++.+.+.|..++++
T Consensus 238 ~~~~~~l~~~g~~~~~~~~pg~~H~~~---~~~~~i~~~~~~~~~~~~ 282 (283)
T PLN02442 238 ENFEEACKEAGAPVTLRLQPGYDHSYF---FIATFIDDHINHHAQALK 282 (283)
T ss_pred HHHHHHHHHcCCCeEEEEeCCCCccHH---HHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999999875 334555566667666654
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.4e-22 Score=181.04 Aligned_cols=220 Identities=19% Similarity=0.247 Sum_probs=146.8
Q ss_pred ceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCC
Q 011049 235 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK 314 (494)
Q Consensus 235 ~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~ 314 (494)
..+..+.+.|.+. .+++.|+||++||.+. +...+ ...+..|+++||.|+++++++. |.+
T Consensus 10 ~~~~~~~~~p~~~---~~~~~p~vv~~HG~~~-----------~~~~~----~~~~~~l~~~G~~v~~~d~~g~---G~~ 68 (249)
T PRK10566 10 AGIEVLHAFPAGQ---RDTPLPTVFFYHGFTS-----------SKLVY----SYFAVALAQAGFRVIMPDAPMH---GAR 68 (249)
T ss_pred cCcceEEEcCCCC---CCCCCCEEEEeCCCCc-----------ccchH----HHHHHHHHhCCCEEEEecCCcc---ccc
Confidence 3566677888642 1234799999999642 11112 2356688899999999777643 322
Q ss_pred CC------Cchh---HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCC--CCCCC-
Q 011049 315 LP------NDRF---VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG--SYNKT- 382 (494)
Q Consensus 315 ~~------~~~~---~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~--~~~~~- 382 (494)
.. ...+ .....+|+.++++++.+++.+|++||+++|||+||++++.++.++|+. ++++...+ .+...
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~-~~~~~~~~~~~~~~~~ 147 (249)
T PRK10566 69 FSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWV-KCVASLMGSGYFTSLA 147 (249)
T ss_pred CCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCe-eEEEEeeCcHHHHHHH
Confidence 11 0111 123467888889999998889999999999999999999999998765 44433322 11100
Q ss_pred --CCCCCccccc---ccccccHHHHHhcCccccccCC-CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCc--EEEEE
Q 011049 383 --LTPFGFQTEF---RTLWEATNVYIEMSPITHANKI-KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGAL--SRLVL 454 (494)
Q Consensus 383 --~~~~~~~~~~---~~~~~~~~~~~~~sp~~~~~~~-~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~--~~~~~ 454 (494)
..+....... .........+...++...+.++ ++|+|++||++|..|| +.++++++++|+.+|.+ +++++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~--~~~~~~l~~~l~~~g~~~~~~~~~ 225 (249)
T PRK10566 148 RTLFPPLIPETAAQQAEFNNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVP--AAESLRLQQALRERGLDKNLTCLW 225 (249)
T ss_pred HHhcccccccccccHHHHHHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCC--HHHHHHHHHHHHhcCCCcceEEEe
Confidence 0000000000 0000011123334555566676 6999999999999998 99999999999998864 78999
Q ss_pred cCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 455 LPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 455 ~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
|++++|.+. ...+.++.+||+++|
T Consensus 226 ~~~~~H~~~-----~~~~~~~~~fl~~~~ 249 (249)
T PRK10566 226 EPGVRHRIT-----PEALDAGVAFFRQHL 249 (249)
T ss_pred cCCCCCccC-----HHHHHHHHHHHHhhC
Confidence 999999875 256889999999875
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-21 Score=181.64 Aligned_cols=239 Identities=18% Similarity=0.203 Sum_probs=153.0
Q ss_pred ccEEEEEEcC-CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHH-HhCCeEE
Q 011049 223 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF-LARRFAV 300 (494)
Q Consensus 223 ~~~~~~~~~~-dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~G~~v 300 (494)
+.+.+++.+. -+.++.+.+|+|+++... ++|+|+++||.+.. ...|... .....+ .+.||.|
T Consensus 12 ~~~~~~~~s~~~~~~~~~~v~~P~~~~~~---~~P~vvllHG~~~~-----------~~~~~~~--~~~~~la~~~g~~V 75 (275)
T TIGR02821 12 TQGFYRHKSETCGVPMTFGVFLPPQAAAG---PVPVLWYLSGLTCT-----------HENFMIK--AGAQRFAAEHGLAL 75 (275)
T ss_pred EEEEEEEeccccCCceEEEEEcCCCccCC---CCCEEEEccCCCCC-----------ccHHHhh--hHHHHHHhhcCcEE
Confidence 4555666654 567889999999875432 38999999997521 1122111 112234 4579999
Q ss_pred EeCCCCCCCCCCCC-------------CC----Cchh--HHHHHHHHHHHHHHHH-HcCCCCCCcEEEEecChHHHHHHH
Q 011049 301 LAGPSIPIIGEGDK-------------LP----NDRF--VEQLVSSAEAAVEEVV-RRGVADPSRIAVGGHSYGAFMTAH 360 (494)
Q Consensus 301 ~~~~~~~~~g~g~~-------------~~----~~~~--~~~~~~d~~~~v~~l~-~~~~~d~~ri~i~G~S~GG~~a~~ 360 (494)
++++.. ..|.+.. +. ...+ .......+...+..++ +...+|.++++|+|+||||++++.
T Consensus 76 v~Pd~~-~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~ 154 (275)
T TIGR02821 76 VAPDTS-PRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALV 154 (275)
T ss_pred EEeCCC-CCcCCCCCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHH
Confidence 998762 1222210 00 0000 0011222222333333 334478899999999999999999
Q ss_pred HHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccC--CCCCEEEEecCCCCCCCCCH-HHHH
Q 011049 361 LLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANK--IKKPILIIHGEVDDKVGLFP-MQAE 437 (494)
Q Consensus 361 ~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~--~~~P~li~~G~~D~~v~~~~-~~~~ 437 (494)
++.++|++|+++++++|+.+.....+...........+.+.+...+|...+.+ ..+|+++.||+.|+++| . .++.
T Consensus 155 ~a~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~plli~~G~~D~~v~--~~~~~~ 232 (275)
T TIGR02821 155 IALKNPDRFKSVSAFAPIVAPSRCPWGQKAFSAYLGADEAAWRSYDASLLVADGGRHSTILIDQGTADQFLD--EQLRPD 232 (275)
T ss_pred HHHhCcccceEEEEECCccCcccCcchHHHHHHHhcccccchhhcchHHHHhhcccCCCeeEeecCCCcccC--ccccHH
Confidence 99999999999999999877432221100000000111223334455554443 45899999999999987 7 5788
Q ss_pred HHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 438 RFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 438 ~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
.+.++|+++++++++.++|+++|+|.. ....+.+.++|+.+++
T Consensus 233 ~~~~~l~~~g~~v~~~~~~g~~H~f~~---~~~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 233 AFEQACRAAGQALTLRRQAGYDHSYYF---IASFIADHLRHHAERL 275 (275)
T ss_pred HHHHHHHHcCCCeEEEEeCCCCccchh---HHHhHHHHHHHHHhhC
Confidence 999999999999999999999999853 4466777788887764
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.4e-21 Score=182.24 Aligned_cols=242 Identities=16% Similarity=0.201 Sum_probs=163.6
Q ss_pred ccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEE
Q 011049 221 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 300 (494)
Q Consensus 221 ~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 300 (494)
.++.+...+++.||.++.+..+.|.+. ..+.|+||++||.+.. ..|. .......|+++||.|
T Consensus 29 ~~~~~~~~~~~~dg~~l~~~~~~~~~~----~~~~~~VvllHG~~~~------------~~~~--~~~~~~~L~~~Gy~V 90 (330)
T PLN02298 29 GIKGSKSFFTSPRGLSLFTRSWLPSSS----SPPRALIFMVHGYGND------------ISWT--FQSTAIFLAQMGFAC 90 (330)
T ss_pred CCccccceEEcCCCCEEEEEEEecCCC----CCCceEEEEEcCCCCC------------ccee--hhHHHHHHHhCCCEE
Confidence 345666778889999999999988642 1236899999996310 0111 112344678899999
Q ss_pred EeCCCCCCCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCC
Q 011049 301 LAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 377 (494)
Q Consensus 301 ~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 377 (494)
+++|.+ |+|.+... ....+...+|+.++++++......+..+++|+|||+||.+++.++.++|++++++|+.+|
T Consensus 91 ~~~D~r---GhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~ 167 (330)
T PLN02298 91 FALDLE---GHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAP 167 (330)
T ss_pred EEecCC---CCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecc
Confidence 996655 55555321 123466789999999999876444556899999999999999999999999999999988
Q ss_pred CCCCCCC---CCCcc-----------c----cccccc------ccHHHHHhcCc----------------------cccc
Q 011049 378 SYNKTLT---PFGFQ-----------T----EFRTLW------EATNVYIEMSP----------------------ITHA 411 (494)
Q Consensus 378 ~~~~~~~---~~~~~-----------~----~~~~~~------~~~~~~~~~sp----------------------~~~~ 411 (494)
....... .+... . ...... .....+...+| ...+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 247 (330)
T PLN02298 168 MCKISDKIRPPWPIPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKL 247 (330)
T ss_pred cccCCcccCCchHHHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhh
Confidence 6432110 00000 0 000000 00001111111 1235
Q ss_pred cCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcc---cHHHHHHHHHHHHHHhcCCCC
Q 011049 412 NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE---NVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 412 ~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~---~~~~~~~~~~~fl~~~l~~~~ 487 (494)
.++++|+||+||++|..+| +..++.+++.+... ..+++++++++|.+...+ ....+.+.+.+||.+++....
T Consensus 248 ~~i~~PvLii~G~~D~ivp--~~~~~~l~~~i~~~--~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~~ 322 (330)
T PLN02298 248 KDVSIPFIVLHGSADVVTD--PDVSRALYEEAKSE--DKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGKA 322 (330)
T ss_pred hhcCCCEEEEecCCCCCCC--HHHHHHHHHHhccC--CceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCCC
Confidence 6788999999999999998 89999988887643 358899999999975322 234677889999999986553
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.7e-21 Score=173.02 Aligned_cols=211 Identities=13% Similarity=0.017 Sum_probs=144.0
Q ss_pred EEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCC
Q 011049 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 304 (494)
Q Consensus 225 ~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 304 (494)
....+.+.||.+|.||+..|++.. ..+.|+||+.||-+ +... .....+..|+++||+|+..|
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~~---~~~~~~vIi~HGf~-----------~~~~----~~~~~A~~La~~G~~vLrfD 71 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKENS---PKKNNTILIASGFA-----------RRMD----HFAGLAEYLSSNGFHVIRYD 71 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCcccC---CCCCCEEEEeCCCC-----------CChH----HHHHHHHHHHHCCCEEEEec
Confidence 334567789999999999997522 23478999999842 1111 12345668899999999977
Q ss_pred CCCCCCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCC
Q 011049 305 SIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT 382 (494)
Q Consensus 305 ~~~~~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~ 382 (494)
.++.. |.+... .........|+.++++|+.++. .++|+++|||+||.+++.+|... .++++|+.+|+.+..
T Consensus 72 ~rg~~--GeS~G~~~~~t~s~g~~Dl~aaid~lk~~~---~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~ 144 (307)
T PRK13604 72 SLHHV--GLSSGTIDEFTMSIGKNSLLTVVDWLNTRG---INNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLR 144 (307)
T ss_pred CCCCC--CCCCCccccCcccccHHHHHHHHHHHHhcC---CCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHH
Confidence 65432 222111 1112234789999999998864 46899999999999987666643 489999999998721
Q ss_pred C------CC----CCcccc-------ccccc--ccHHH------HHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHH
Q 011049 383 L------TP----FGFQTE-------FRTLW--EATNV------YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAE 437 (494)
Q Consensus 383 ~------~~----~~~~~~-------~~~~~--~~~~~------~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~ 437 (494)
. .. +.+... ..... ...+. ....+|+..+++++.|+|++||+.|..|| +..++
T Consensus 145 d~l~~~~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp--~~~s~ 222 (307)
T PRK13604 145 DTLERALGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVK--QSEVI 222 (307)
T ss_pred HHHHHhhhcccccCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccC--HHHHH
Confidence 0 00 000000 00000 00000 11345667788889999999999999998 99999
Q ss_pred HHHHHHHhCCCcEEEEEcCCCCCccCC
Q 011049 438 RFFDALKGHGALSRLVLLPFEHHVYAA 464 (494)
Q Consensus 438 ~~~~~l~~~g~~~~~~~~~~~~H~~~~ 464 (494)
+++++++. .+++++++||+.|.+..
T Consensus 223 ~l~e~~~s--~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 223 DLLDSIRS--EQCKLYSLIGSSHDLGE 247 (307)
T ss_pred HHHHHhcc--CCcEEEEeCCCccccCc
Confidence 99998764 45799999999999873
|
|
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.3e-22 Score=177.17 Aligned_cols=201 Identities=23% Similarity=0.252 Sum_probs=140.8
Q ss_pred EEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCC-CCCCC
Q 011049 237 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG-EGDKL 315 (494)
Q Consensus 237 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g-~g~~~ 315 (494)
+.+++..|++. ++.|.||++|+.. | +.......+..|+++||.|+++|.+...+ .-...
T Consensus 1 ~~ay~~~P~~~-----~~~~~Vvv~~d~~-----------G----~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~ 60 (218)
T PF01738_consen 1 IDAYVARPEGG-----GPRPAVVVIHDIF-----------G----LNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDP 60 (218)
T ss_dssp EEEEEEEETTS-----SSEEEEEEE-BTT-----------B----S-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCH
T ss_pred CeEEEEeCCCC-----CCCCEEEEEcCCC-----------C----CchHHHHHHHHHHhcCCCEEecccccCCCCCccch
Confidence 57899999872 4589999999742 1 21112235668899999999988865444 11110
Q ss_pred C-Cc-hh-------HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCC
Q 011049 316 P-ND-RF-------VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF 386 (494)
Q Consensus 316 ~-~~-~~-------~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~ 386 (494)
. .. .+ .+....|+.+++++|.+++.++.+||+++|+|+||.+++.++... ..++++|+..|...
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~------ 133 (218)
T PF01738_consen 61 EEAFAAMRELFAPRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSP------ 133 (218)
T ss_dssp HCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSS------
T ss_pred hhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCC------
Confidence 0 00 11 234578888999999999888899999999999999999998887 78999999888100
Q ss_pred CcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcc
Q 011049 387 GFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE 466 (494)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~ 466 (494)
...+.....++++|+|+++|++|+.++ .+...++.+.|++.+.++++.+||+++|+|....
T Consensus 134 -----------------~~~~~~~~~~~~~P~l~~~g~~D~~~~--~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~ 194 (218)
T PF01738_consen 134 -----------------PPPPLEDAPKIKAPVLILFGENDPFFP--PEEVEALEEALKAAGVDVEVHVYPGAGHGFANPS 194 (218)
T ss_dssp -----------------GGGHHHHGGG--S-EEEEEETT-TTS---HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTT
T ss_pred -----------------CCcchhhhcccCCCEeecCccCCCCCC--hHHHHHHHHHHHhcCCcEEEEECCCCcccccCCC
Confidence 012233456788999999999999998 8888999999999999999999999999996533
Q ss_pred -------cHHHHHHHHHHHHHHhc
Q 011049 467 -------NVMHVIWETDRWLQKYC 483 (494)
Q Consensus 467 -------~~~~~~~~~~~fl~~~l 483 (494)
...+.++++++||++||
T Consensus 195 ~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 195 RPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp STT--HHHHHHHHHHHHHHHCC--
T ss_pred CcccCHHHHHHHHHHHHHHHHhcC
Confidence 23467889999999886
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.5e-21 Score=184.35 Aligned_cols=230 Identities=17% Similarity=0.156 Sum_probs=152.0
Q ss_pred ccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEE
Q 011049 221 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 300 (494)
Q Consensus 221 ~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 300 (494)
....+.++++..+|.++++++++|+. .++.|+||+.||.+ +.. ..........|+++||+|
T Consensus 165 ~~~~e~v~i~~~~g~~l~g~l~~P~~-----~~~~P~Vli~gG~~-----------~~~---~~~~~~~~~~La~~Gy~v 225 (414)
T PRK05077 165 PGELKELEFPIPGGGPITGFLHLPKG-----DGPFPTVLVCGGLD-----------SLQ---TDYYRLFRDYLAPRGIAM 225 (414)
T ss_pred CCceEEEEEEcCCCcEEEEEEEECCC-----CCCccEEEEeCCcc-----------cch---hhhHHHHHHHHHhCCCEE
Confidence 34578999998898899999999973 23479888766532 000 001112445788999999
Q ss_pred EeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCC
Q 011049 301 LAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 380 (494)
Q Consensus 301 ~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~ 380 (494)
+++|.+ |+|.+.... ...+......+++++|...+.+|.+||+++|+|+||++++.++..+|++++++|+.+|+.+
T Consensus 226 l~~D~p---G~G~s~~~~-~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 226 LTIDMP---SVGFSSKWK-LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVH 301 (414)
T ss_pred EEECCC---CCCCCCCCC-ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccc
Confidence 996665 444432211 0011122235778999999889999999999999999999999999999999999998865
Q ss_pred CCCCCCC--------cc----cccccccccHHHH----HhcCcc--c-cccCCCCCEEEEecCCCCCCCCCHHHHHHHHH
Q 011049 381 KTLTPFG--------FQ----TEFRTLWEATNVY----IEMSPI--T-HANKIKKPILIIHGEVDDKVGLFPMQAERFFD 441 (494)
Q Consensus 381 ~~~~~~~--------~~----~~~~~~~~~~~~~----~~~sp~--~-~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~ 441 (494)
....... +. ...+......+.+ ...+.. . ...++++|+|++||++|+++| +.+++.+.+
T Consensus 302 ~~~~~~~~~~~~p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP--~~~a~~l~~ 379 (414)
T PRK05077 302 TLLTDPKRQQQVPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSP--EEDSRLIAS 379 (414)
T ss_pred hhhcchhhhhhchHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCC--HHHHHHHHH
Confidence 2111100 00 0000001111111 111111 1 125688999999999999998 888876654
Q ss_pred HHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 442 ALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 442 ~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
.. .+.+++++|+. |. .+....++..+.+||.++|
T Consensus 380 ~~----~~~~l~~i~~~-~~---~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 380 SS----ADGKLLEIPFK-PV---YRNFDKALQEISDWLEDRL 413 (414)
T ss_pred hC----CCCeEEEccCC-Cc---cCCHHHHHHHHHHHHHHHh
Confidence 43 34678999986 32 2466789999999999886
|
|
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.4e-20 Score=165.45 Aligned_cols=212 Identities=19% Similarity=0.206 Sum_probs=164.0
Q ss_pred EEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCC
Q 011049 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 304 (494)
Q Consensus 225 ~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 304 (494)
+.+++++.| .++.+++.+|.+ .++.|+||++|+.. | ........+..|+.+||.|++++
T Consensus 3 ~~v~~~~~~-~~~~~~~a~P~~-----~~~~P~VIv~hei~-----------G----l~~~i~~~a~rlA~~Gy~v~~Pd 61 (236)
T COG0412 3 TDVTIPAPD-GELPAYLARPAG-----AGGFPGVIVLHEIF-----------G----LNPHIRDVARRLAKAGYVVLAPD 61 (236)
T ss_pred cceEeeCCC-ceEeEEEecCCc-----CCCCCEEEEEeccc-----------C----CchHHHHHHHHHHhCCcEEEech
Confidence 467788777 799999999987 33459999999742 1 11223345678999999999987
Q ss_pred CCCCCCCCCCCC--C----c-----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEE
Q 011049 305 SIPIIGEGDKLP--N----D-----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGI 373 (494)
Q Consensus 305 ~~~~~g~g~~~~--~----~-----~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v 373 (494)
.+...|...... . . ........|+.++++||.+++.++++||+++|+|+||.+++.++.+.| .+++++
T Consensus 62 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v 140 (236)
T COG0412 62 LYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAV 140 (236)
T ss_pred hhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEE
Confidence 665433322211 0 0 111466889999999999999899999999999999999999999986 789999
Q ss_pred eCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEE
Q 011049 374 ARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLV 453 (494)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~ 453 (494)
++.|..-. +......++++|+|+.+|+.|..+| ......+.+++.++++++++.
T Consensus 141 ~fyg~~~~------------------------~~~~~~~~~~~pvl~~~~~~D~~~p--~~~~~~~~~~~~~~~~~~~~~ 194 (236)
T COG0412 141 AFYGGLIA------------------------DDTADAPKIKVPVLLHLAGEDPYIP--AADVDALAAALEDAGVKVDLE 194 (236)
T ss_pred EecCCCCC------------------------CcccccccccCcEEEEecccCCCCC--hhHHHHHHHHHHhcCCCeeEE
Confidence 99884221 0111256789999999999999998 888899999999998899999
Q ss_pred EcCCCCCccCCcc----------cHHHHHHHHHHHHHHhcC
Q 011049 454 LLPFEHHVYAARE----------NVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 454 ~~~~~~H~~~~~~----------~~~~~~~~~~~fl~~~l~ 484 (494)
+|+++.|+|.... .....++++++||.+++.
T Consensus 195 ~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 195 IYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred EeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 9999999998432 124678899999999875
|
|
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.3e-21 Score=177.36 Aligned_cols=232 Identities=21% Similarity=0.179 Sum_probs=154.0
Q ss_pred ccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEE
Q 011049 221 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 300 (494)
Q Consensus 221 ~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 300 (494)
......|+|++.+|..|.+++++|++. ++++|+||.+||.+... . .......++.+||+|
T Consensus 53 ~~~vy~v~f~s~~g~~V~g~l~~P~~~----~~~~Pavv~~hGyg~~~-----------~-----~~~~~~~~a~~G~~v 112 (320)
T PF05448_consen 53 GVEVYDVSFESFDGSRVYGWLYRPKNA----KGKLPAVVQFHGYGGRS-----------G-----DPFDLLPWAAAGYAV 112 (320)
T ss_dssp SEEEEEEEEEEGGGEEEEEEEEEES-S----SSSEEEEEEE--TT--G-----------G-----GHHHHHHHHHTT-EE
T ss_pred CEEEEEEEEEccCCCEEEEEEEecCCC----CCCcCEEEEecCCCCCC-----------C-----CcccccccccCCeEE
Confidence 456788999999999999999999852 35599999999854110 0 112234679999999
Q ss_pred EeCCCCCCCCCC------------------CCC-CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHH
Q 011049 301 LAGPSIPIIGEG------------------DKL-PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL 361 (494)
Q Consensus 301 ~~~~~~~~~g~g------------------~~~-~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~ 361 (494)
+.++.+|..|.. ... ....+...++.|+..++++|.+++.+|++||+++|.|.||.+++.+
T Consensus 113 l~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~ 192 (320)
T PF05448_consen 113 LAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAA 192 (320)
T ss_dssp EEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHH
T ss_pred EEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHH
Confidence 997766554211 111 2233456678999999999999999999999999999999999999
Q ss_pred HHhCCCceeEEEeCCCCCCCCC-----C--CCCccc---ccc----cccc---cHHHHHhcCccccccCCCCCEEEEecC
Q 011049 362 LAHAPHLFCCGIARSGSYNKTL-----T--PFGFQT---EFR----TLWE---ATNVYIEMSPITHANKIKKPILIIHGE 424 (494)
Q Consensus 362 ~~~~p~~~~a~v~~~~~~~~~~-----~--~~~~~~---~~~----~~~~---~~~~~~~~sp~~~~~~~~~P~li~~G~ 424 (494)
++.. ++++++++..|...... . ...+.. ..+ ..-. ..+.+...+..+.+.+|++|+|+..|-
T Consensus 193 aaLd-~rv~~~~~~vP~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl 271 (320)
T PF05448_consen 193 AALD-PRVKAAAADVPFLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGL 271 (320)
T ss_dssp HHHS-ST-SEEEEESESSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEET
T ss_pred HHhC-ccccEEEecCCCccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEec
Confidence 9998 57999999888643110 0 011100 000 0001 123345567888899999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 425 VDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 425 ~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
.|+.|| +......+..+.. +.++.+||..+|.... ....++.++||.+|
T Consensus 272 ~D~~cP--P~t~fA~yN~i~~---~K~l~vyp~~~He~~~----~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 272 QDPVCP--PSTQFAAYNAIPG---PKELVVYPEYGHEYGP----EFQEDKQLNFLKEH 320 (320)
T ss_dssp T-SSS---HHHHHHHHCC--S---SEEEEEETT--SSTTH----HHHHHHHHHHHHH-
T ss_pred CCCCCC--chhHHHHHhccCC---CeeEEeccCcCCCchh----hHHHHHHHHHHhcC
Confidence 999988 8888888888864 4799999999996542 23367789999876
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.6e-20 Score=176.80 Aligned_cols=235 Identities=14% Similarity=0.145 Sum_probs=156.9
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeC
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 303 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 303 (494)
.+...+.+.||.++.+..+.|++- .+.|+||++||.+.. .. + +.......|+++||.|+++
T Consensus 61 ~~~~~~~~~~g~~l~~~~~~p~~~-----~~~~~iv~lHG~~~~-----------~~-~--~~~~~~~~l~~~g~~v~~~ 121 (349)
T PLN02385 61 TEESYEVNSRGVEIFSKSWLPENS-----RPKAAVCFCHGYGDT-----------CT-F--FFEGIARKIASSGYGVFAM 121 (349)
T ss_pred eeeeeEEcCCCCEEEEEEEecCCC-----CCCeEEEEECCCCCc-----------cc-h--HHHHHHHHHHhCCCEEEEe
Confidence 344456668999999999998641 236899999996411 00 0 1112345677899999996
Q ss_pred CCCCCCCCCCCCCCc---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCC
Q 011049 304 PSIPIIGEGDKLPND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 380 (494)
Q Consensus 304 ~~~~~~g~g~~~~~~---~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~ 380 (494)
|.+ |+|.+.... ...+..++|+.+.++.+..+...+..++.++||||||.+++.++.++|++++++|+++|...
T Consensus 122 D~~---G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~ 198 (349)
T PLN02385 122 DYP---GFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCK 198 (349)
T ss_pred cCC---CCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccccc
Confidence 665 556554321 13456788888888888665444556899999999999999999999999999999988643
Q ss_pred CCC---CCCC----------------c-cc-cc-ccccccH-----------------------HHHHh-cCccccccCC
Q 011049 381 KTL---TPFG----------------F-QT-EF-RTLWEAT-----------------------NVYIE-MSPITHANKI 414 (494)
Q Consensus 381 ~~~---~~~~----------------~-~~-~~-~~~~~~~-----------------------~~~~~-~sp~~~~~~~ 414 (494)
... .... . .. .. ...+... +.+.. .+....+.++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i 278 (349)
T PLN02385 199 IADDVVPPPLVLQILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEV 278 (349)
T ss_pred ccccccCchHHHHHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccC
Confidence 110 0000 0 00 00 0000000 00100 0112345678
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCccc---HHHHHHHHHHHHHHhcC
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAREN---VMHVIWETDRWLQKYCL 484 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~---~~~~~~~~~~fl~~~l~ 484 (494)
++|+|++||++|..+| +..++.+++.+... +.+++++++++|.+...+. ...++..+.+||++++.
T Consensus 279 ~~P~Lii~G~~D~vv~--~~~~~~l~~~~~~~--~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 279 SLPLLILHGEADKVTD--PSVSKFLYEKASSS--DKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred CCCEEEEEeCCCCccC--hHHHHHHHHHcCCC--CceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 9999999999999998 88888888877543 3588899999999763221 34588899999999875
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.2e-20 Score=160.34 Aligned_cols=234 Identities=18% Similarity=0.198 Sum_probs=165.9
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeC
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 303 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 303 (494)
...-.+++.+|..+....+.|.+- ..+..+|+++||.+... .......+..|+..||.|+..
T Consensus 27 ~~~~~~~n~rG~~lft~~W~p~~~----~~pr~lv~~~HG~g~~~--------------s~~~~~~a~~l~~~g~~v~a~ 88 (313)
T KOG1455|consen 27 YSESFFTNPRGAKLFTQSWLPLSG----TEPRGLVFLCHGYGEHS--------------SWRYQSTAKRLAKSGFAVYAI 88 (313)
T ss_pred eeeeeEEcCCCCEeEEEecccCCC----CCCceEEEEEcCCcccc--------------hhhHHHHHHHHHhCCCeEEEe
Confidence 444567788999999999999652 13468999999954110 011223566889999999995
Q ss_pred CCCCCCCCCCCCCCch---hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCC
Q 011049 304 PSIPIIGEGDKLPNDR---FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 380 (494)
Q Consensus 304 ~~~~~~g~g~~~~~~~---~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~ 380 (494)
|+ .|+|.+..... -.+..++|+..-++.++.+..-.....+++||||||.+++.++.++|+.+.++|+.+|+.-
T Consensus 89 D~---~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~ 165 (313)
T KOG1455|consen 89 DY---EGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCK 165 (313)
T ss_pred ec---cCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccc
Confidence 54 46666654333 3567789999999988777544456789999999999999999999999999999998753
Q ss_pred CCC-------------------CCCCc-ccc--cccccccHH--HHHhcCc----------------------cccccCC
Q 011049 381 KTL-------------------TPFGF-QTE--FRTLWEATN--VYIEMSP----------------------ITHANKI 414 (494)
Q Consensus 381 ~~~-------------------~~~~~-~~~--~~~~~~~~~--~~~~~sp----------------------~~~~~~~ 414 (494)
... ..|.. ... ......+++ .....+| ..++.++
T Consensus 166 i~~~~kp~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~v 245 (313)
T KOG1455|consen 166 ISEDTKPHPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEV 245 (313)
T ss_pred cCCccCCCcHHHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccc
Confidence 110 01110 000 000001111 1111222 3456788
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccC---CcccHHHHHHHHHHHHHHh
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA---ARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~---~~~~~~~~~~~~~~fl~~~ 482 (494)
+.|+|++||+.|.+.. +.-++++++......+ ++.+|||.-|.+. ..++.+.++..|++||+++
T Consensus 246 tvPflilHG~dD~VTD--p~~Sk~Lye~A~S~DK--TlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 246 TVPFLILHGTDDKVTD--PKVSKELYEKASSSDK--TLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred cccEEEEecCCCcccC--cHHHHHHHHhccCCCC--ceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9999999999999976 9999999999887665 7889999999976 3567788999999999876
|
|
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-19 Score=170.99 Aligned_cols=229 Identities=15% Similarity=0.167 Sum_probs=157.5
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEE
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVL 301 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~ 301 (494)
..+.+++++.+| .+.+.+|.|.. . +.|+||++|||+|..+ +...+. .....|+. .|+.|+
T Consensus 56 ~~~~~~i~~~~g-~i~~~~y~P~~---~---~~p~vv~~HGGg~~~g--------~~~~~~----~~~~~la~~~g~~Vv 116 (318)
T PRK10162 56 ATRAYMVPTPYG-QVETRLYYPQP---D---SQATLFYLHGGGFILG--------NLDTHD----RIMRLLASYSGCTVI 116 (318)
T ss_pred eEEEEEEecCCC-ceEEEEECCCC---C---CCCEEEEEeCCcccCC--------Cchhhh----HHHHHHHHHcCCEEE
Confidence 467788888887 69999999963 1 2699999999986432 222222 23446666 699999
Q ss_pred eCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHhC------CCceeEE
Q 011049 302 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHA------PHLFCCG 372 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~~------p~~~~a~ 372 (494)
.++++..... .+ ...++|+.++++|+.++ ..+|++||+|+|+|+||.+++.++.+. +.+++++
T Consensus 117 ~vdYrlape~-------~~-p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~ 188 (318)
T PRK10162 117 GIDYTLSPEA-------RF-PQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGV 188 (318)
T ss_pred EecCCCCCCC-------CC-CCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhhe
Confidence 9898754321 11 22467888888988764 347899999999999999999988653 3578899
Q ss_pred EeCCCCCCCCCCCCCccccccccc-----ccHHH----HH-----hcCccccc--cCC---CCCEEEEecCCCCCCCCCH
Q 011049 373 IARSGSYNKTLTPFGFQTEFRTLW-----EATNV----YI-----EMSPITHA--NKI---KKPILIIHGEVDDKVGLFP 433 (494)
Q Consensus 373 v~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~----~~-----~~sp~~~~--~~~---~~P~li~~G~~D~~v~~~~ 433 (494)
++++|+.+..... ... .....| ...+. |. ..+|.... ..+ -.|++|++|+.|++ .
T Consensus 189 vl~~p~~~~~~~~-s~~-~~~~~~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L----~ 262 (318)
T PRK10162 189 LLWYGLYGLRDSV-SRR-LLGGVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPL----L 262 (318)
T ss_pred EEECCccCCCCCh-hHH-HhCCCccccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcC----c
Confidence 9999987642111 000 000011 00011 11 12333211 222 37999999999998 4
Q ss_pred HHHHHHHHHHHhCCCcEEEEEcCCCCCccCCc----ccHHHHHHHHHHHHHHhcC
Q 011049 434 MQAERFFDALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 434 ~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~fl~~~l~ 484 (494)
.+++.+.++|++.|+++++++|++..|+|... +.....++.+.+||.++++
T Consensus 263 de~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 263 DDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred ChHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 68899999999999999999999999998532 2234678889999998875
|
|
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.4e-19 Score=167.03 Aligned_cols=224 Identities=17% Similarity=0.127 Sum_probs=151.5
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 308 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 308 (494)
+.+.||.++.+.+|.|.+ .+.|+|+++||.+.. ...| ......|+++||.|+++|.+
T Consensus 5 ~~~~~g~~l~~~~~~~~~------~~~~~v~llHG~~~~-----------~~~~----~~~~~~l~~~g~~via~D~~-- 61 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPIT------YPKALVFISHGAGEH-----------SGRY----EELAENISSLGILVFSHDHI-- 61 (276)
T ss_pred eecCCCCEEEEEeccCCC------CCCEEEEEeCCCccc-----------cchH----HHHHHHHHhCCCEEEEccCC--
Confidence 345699999999998852 236889999996421 1112 24566788899999995554
Q ss_pred CCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC
Q 011049 309 IGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP 385 (494)
Q Consensus 309 ~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~ 385 (494)
|+|.+... .......++|+...++++.+.. ...+++++|||+||.+++.++.++|++++++|+.+|..+.....
T Consensus 62 -G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~--~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~ 138 (276)
T PHA02857 62 -GHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTY--PGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVP 138 (276)
T ss_pred -CCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhC--CCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccccccc
Confidence 55655322 1223455788888888776542 23679999999999999999999999999999999865421100
Q ss_pred CC-----------cccc----ccccc--ccH---HHHH--------------------h-cCccccccCCCCCEEEEecC
Q 011049 386 FG-----------FQTE----FRTLW--EAT---NVYI--------------------E-MSPITHANKIKKPILIIHGE 424 (494)
Q Consensus 386 ~~-----------~~~~----~~~~~--~~~---~~~~--------------------~-~sp~~~~~~~~~P~li~~G~ 424 (494)
.. +... ....+ ... ..+. . ......+.++++|+|+++|+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~ 218 (276)
T PHA02857 139 RLNLLAAKLMGIFYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGT 218 (276)
T ss_pred HHHHHHHHHHHHhCCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecC
Confidence 00 0000 00000 000 0000 0 01123456789999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcc--cHHHHHHHHHHHHHHhc
Q 011049 425 VDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE--NVMHVIWETDRWLQKYC 483 (494)
Q Consensus 425 ~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~--~~~~~~~~~~~fl~~~l 483 (494)
+|..+| +..+.++.+.+.. ++++.++++++|.+.... ..+++++.+.+||+++.
T Consensus 219 ~D~i~~--~~~~~~l~~~~~~---~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 219 NNEISD--VSGAYYFMQHANC---NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNRV 274 (276)
T ss_pred CCCcCC--hHHHHHHHHHccC---CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHhc
Confidence 999988 8888888777643 468999999999987543 36788999999999873
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.4e-19 Score=167.44 Aligned_cols=229 Identities=14% Similarity=0.155 Sum_probs=155.4
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeC
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 303 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 303 (494)
.+...+...||.++.+..+.|.. +.|+||++||.+. ........+..++++||.|+++
T Consensus 30 ~~~~~~~~~~g~~l~~~~~~~~~-------~~~~vll~HG~~~---------------~~~~y~~~~~~l~~~g~~v~~~ 87 (330)
T PRK10749 30 REEAEFTGVDDIPIRFVRFRAPH-------HDRVVVICPGRIE---------------SYVKYAELAYDLFHLGYDVLII 87 (330)
T ss_pred ccceEEEcCCCCEEEEEEccCCC-------CCcEEEEECCccc---------------hHHHHHHHHHHHHHCCCeEEEE
Confidence 45667777899999998887642 1478999999531 1111112344678899999996
Q ss_pred CCCCCCCCCCCCCC--------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeC
Q 011049 304 PSIPIIGEGDKLPN--------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIAR 375 (494)
Q Consensus 304 ~~~~~~g~g~~~~~--------~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~ 375 (494)
|.+ |+|.+... ....+..++|+.++++.+.+.. +..++.++||||||.+++.++.++|++++++|+.
T Consensus 88 D~~---G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~ 162 (330)
T PRK10749 88 DHR---GQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPG--PYRKRYALAHSMGGAILTLFLQRHPGVFDAIALC 162 (330)
T ss_pred cCC---CCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcC--CCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEE
Confidence 665 45544221 1134667888888888776542 3478999999999999999999999999999999
Q ss_pred CCCCCCCCC-CCC-------------------------ccc-cccccc--ccH-------HHHHhcCc------------
Q 011049 376 SGSYNKTLT-PFG-------------------------FQT-EFRTLW--EAT-------NVYIEMSP------------ 407 (494)
Q Consensus 376 ~~~~~~~~~-~~~-------------------------~~~-~~~~~~--~~~-------~~~~~~sp------------ 407 (494)
+|....... ... +.. .....| ... +.+. .+|
T Consensus 163 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 241 (330)
T PRK10749 163 APMFGIVLPLPSWMARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYA-DDPELRVGGPTYHWV 241 (330)
T ss_pred CchhccCCCCCcHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHH-hCCCcccCCCcHHHH
Confidence 886431100 000 000 000000 000 1111 111
Q ss_pred ----------cccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC---CcEEEEEcCCCCCccCCccc--HHHHH
Q 011049 408 ----------ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG---ALSRLVLLPFEHHVYAAREN--VMHVI 472 (494)
Q Consensus 408 ----------~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g---~~~~~~~~~~~~H~~~~~~~--~~~~~ 472 (494)
...+.++++|+|++||++|..|+ +..++.+++.+++.+ .+.++++|++++|.+..... ...++
T Consensus 242 ~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~--~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~ 319 (330)
T PRK10749 242 RESILAGEQVLAGAGDITTPLLLLQAEEERVVD--NRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVAL 319 (330)
T ss_pred HHHHHHHHHHHhhccCCCCCEEEEEeCCCeeeC--HHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHH
Confidence 23456788999999999999998 898999999998765 34689999999999875443 56788
Q ss_pred HHHHHHHHHh
Q 011049 473 WETDRWLQKY 482 (494)
Q Consensus 473 ~~~~~fl~~~ 482 (494)
+.+.+||+++
T Consensus 320 ~~i~~fl~~~ 329 (330)
T PRK10749 320 NAIVDFFNRH 329 (330)
T ss_pred HHHHHHHhhc
Confidence 9999999875
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-17 Score=172.96 Aligned_cols=194 Identities=22% Similarity=0.230 Sum_probs=143.1
Q ss_pred hHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC--CCC------------CCcEEEEecChH
Q 011049 289 SSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG--VAD------------PSRIAVGGHSYG 354 (494)
Q Consensus 289 ~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~--~~d------------~~ri~i~G~S~G 354 (494)
...+|+.+||+|+..+.||..+..+.. ..+.....+|..++|+||..+. +.| ..||+++|.|||
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~--~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCP--TTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcC--ccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 446889999999997776654433221 2233567889999999998542 223 479999999999
Q ss_pred HHHHHHHHHhCCCceeEEEeCCCCCCCCCCC---------CCccccc---------------------cccc--------
Q 011049 355 AFMTAHLLAHAPHLFCCGIARSGSYNKTLTP---------FGFQTEF---------------------RTLW-------- 396 (494)
Q Consensus 355 G~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~---------~~~~~~~---------------------~~~~-------- 396 (494)
|++++.+|+..|..++|+|+.++++++.... .++..+. ...+
T Consensus 349 G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 428 (767)
T PRK05371 349 GTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLAELT 428 (767)
T ss_pred HHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHhhhh
Confidence 9999999999889999999999987642110 0110000 0000
Q ss_pred --------ccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccH
Q 011049 397 --------EATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENV 468 (494)
Q Consensus 397 --------~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~ 468 (494)
...+.|...+++.+++++++|+|++||..|.+|+ +.++.+++++|++++++.++++.++ +|........
T Consensus 429 ~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~--~~~s~~ly~aL~~~g~pkkL~l~~g-~H~~~~~~~~ 505 (767)
T PRK05371 429 AAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVK--PKQVYQWWDALPENGVPKKLFLHQG-GHVYPNNWQS 505 (767)
T ss_pred hhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCC--hHHHHHHHHHHHhcCCCeEEEEeCC-CccCCCchhH
Confidence 0112345567888899999999999999999998 8999999999999998889887766 6865544445
Q ss_pred HHHHHHHHHHHHHhcCCCC
Q 011049 469 MHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 469 ~~~~~~~~~fl~~~l~~~~ 487 (494)
.++.+.+.+||+++|++..
T Consensus 506 ~d~~e~~~~Wfd~~LkG~~ 524 (767)
T PRK05371 506 IDFRDTMNAWFTHKLLGID 524 (767)
T ss_pred HHHHHHHHHHHHhccccCC
Confidence 6788899999999998754
|
|
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.6e-19 Score=151.92 Aligned_cols=231 Identities=17% Similarity=0.160 Sum_probs=160.2
Q ss_pred cccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeE
Q 011049 220 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 299 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~ 299 (494)
...++-.++|++.+|.+|.+|+++|... +++.|+||..||=+ ++...+. ....|+..||+
T Consensus 52 ~~ve~ydvTf~g~~g~rI~gwlvlP~~~----~~~~P~vV~fhGY~-----------g~~g~~~-----~~l~wa~~Gya 111 (321)
T COG3458 52 PRVEVYDVTFTGYGGARIKGWLVLPRHE----KGKLPAVVQFHGYG-----------GRGGEWH-----DMLHWAVAGYA 111 (321)
T ss_pred CceEEEEEEEeccCCceEEEEEEeeccc----CCccceEEEEeecc-----------CCCCCcc-----cccccccccee
Confidence 3456778999999999999999999862 35699999999832 1111121 22356899999
Q ss_pred EEeCCCCCCCCCCCC-------------------C-CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHH
Q 011049 300 VLAGPSIPIIGEGDK-------------------L-PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTA 359 (494)
Q Consensus 300 v~~~~~~~~~g~g~~-------------------~-~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~ 359 (494)
|+..+.||..+.... + .+.-+....+.|+..+++.+.+...+|.+||++.|+|.||.+++
T Consensus 112 vf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglal 191 (321)
T COG3458 112 VFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLAL 191 (321)
T ss_pred EEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhh
Confidence 999777765444211 0 11112344588999999999999999999999999999999999
Q ss_pred HHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccc------------c---HHHHHhcCccccccCCCCCEEEEecC
Q 011049 360 HLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWE------------A---TNVYIEMSPITHANKIKKPILIIHGE 424 (494)
Q Consensus 360 ~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~------------~---~~~~~~~sp~~~~~~~~~P~li~~G~ 424 (494)
.+++.. .+++++++..|........+.... ..++. . .+.+...+..+.+.++|.|+|+..|-
T Consensus 192 aaaal~-~rik~~~~~~Pfl~df~r~i~~~~--~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL 268 (321)
T COG3458 192 AAAALD-PRIKAVVADYPFLSDFPRAIELAT--EGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGL 268 (321)
T ss_pred hhhhcC-hhhhcccccccccccchhheeecc--cCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEeecc
Confidence 999998 588999999997653221111110 01111 1 12233345556788899999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 425 VDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 425 ~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
.|+.|| +.....++++|... .++.+||.-+|.-.. ....+++..|+...
T Consensus 269 ~D~vcp--PstqFA~yN~l~~~---K~i~iy~~~aHe~~p----~~~~~~~~~~l~~l 317 (321)
T COG3458 269 MDPVCP--PSTQFAAYNALTTS---KTIEIYPYFAHEGGP----GFQSRQQVHFLKIL 317 (321)
T ss_pred cCCCCC--ChhhHHHhhcccCC---ceEEEeeccccccCc----chhHHHHHHHHHhh
Confidence 999987 78777888877643 467788877786432 12334456666543
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.1e-17 Score=159.28 Aligned_cols=232 Identities=14% Similarity=0.110 Sum_probs=156.2
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeC
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 303 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 303 (494)
.....+...++..+.+.++.|.. ..+.|+||++||.+.+ ...| ...+..|+++||.|+++
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~p~~-----~~~~~~Vl~lHG~~~~-----------~~~~----~~~a~~L~~~Gy~V~~~ 169 (395)
T PLN02652 110 WATSLFYGARRNALFCRSWAPAA-----GEMRGILIIIHGLNEH-----------SGRY----LHFAKQLTSCGFGVYAM 169 (395)
T ss_pred EEEEEEECCCCCEEEEEEecCCC-----CCCceEEEEECCchHH-----------HHHH----HHHHHHHHHCCCEEEEe
Confidence 45566777888899999999864 1226899999996411 1111 23455788899999996
Q ss_pred CCCCCCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC---ceeEEEeCCC
Q 011049 304 PSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH---LFCCGIARSG 377 (494)
Q Consensus 304 ~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~---~~~a~v~~~~ 377 (494)
|.+ |+|.+... ....+...+|+.++++++.... +..++.|+|||+||.+++.++. +|+ +++++|+.+|
T Consensus 170 D~r---GhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP 243 (395)
T PLN02652 170 DWI---GHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSEN--PGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSP 243 (395)
T ss_pred CCC---CCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhC--CCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECc
Confidence 655 55554322 1234566789999999987652 2357999999999999987664 554 7899999888
Q ss_pred CCCCCCC---------------C-CCccc---ccccccccHHHH-H-hcC----------------------ccccccCC
Q 011049 378 SYNKTLT---------------P-FGFQT---EFRTLWEATNVY-I-EMS----------------------PITHANKI 414 (494)
Q Consensus 378 ~~~~~~~---------------~-~~~~~---~~~~~~~~~~~~-~-~~s----------------------p~~~~~~~ 414 (494)
....... + +.+.. .......+++.. . ..+ ....+.++
T Consensus 244 ~l~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I 323 (395)
T PLN02652 244 ALRVKPAHPIVGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSV 323 (395)
T ss_pred ccccccchHHHHHHHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccC
Confidence 7542110 0 00000 000000000000 0 001 12345678
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
++|+|++||++|..+| +.+++++++.+... ..++++|++++|.....+..+.+++.+.+||..++..
T Consensus 324 ~vPvLIi~G~~D~vvp--~~~a~~l~~~~~~~--~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~~ 390 (395)
T PLN02652 324 TVPFMVLHGTADRVTD--PLASQDLYNEAASR--HKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLDL 390 (395)
T ss_pred CCCEEEEEeCCCCCCC--HHHHHHHHHhcCCC--CceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhhc
Confidence 9999999999999998 99999998887553 3578889999999876567889999999999998863
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-17 Score=150.25 Aligned_cols=129 Identities=21% Similarity=0.159 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHH
Q 011049 323 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVY 402 (494)
Q Consensus 323 ~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (494)
.....+.+.++++.++..++++||+++|+|+||.+++.++..+|+++.++++++|.... ..
T Consensus 82 ~~~~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~------~~------------- 142 (232)
T PRK11460 82 AIMPTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS------LP------------- 142 (232)
T ss_pred HHHHHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc------cc-------------
Confidence 33455666777777776788999999999999999999999999988888887774210 00
Q ss_pred HhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 403 IEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 403 ~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
.....++|+|++||++|++|| +..++++.+.|++.+.++++++|++++|.+.. +..+.+.+||.+.
T Consensus 143 -------~~~~~~~pvli~hG~~D~vvp--~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~-----~~~~~~~~~l~~~ 208 (232)
T PRK11460 143 -------ETAPTATTIHLIHGGEDPVID--VAHAVAAQEALISLGGDVTLDIVEDLGHAIDP-----RLMQFALDRLRYT 208 (232)
T ss_pred -------ccccCCCcEEEEecCCCCccC--HHHHHHHHHHHHHCCCCeEEEEECCCCCCCCH-----HHHHHHHHHHHHH
Confidence 011236899999999999998 99999999999999999999999999999863 4556667777666
Q ss_pred cC
Q 011049 483 CL 484 (494)
Q Consensus 483 l~ 484 (494)
+.
T Consensus 209 l~ 210 (232)
T PRK11460 209 VP 210 (232)
T ss_pred cc
Confidence 54
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.5e-18 Score=141.24 Aligned_cols=238 Identities=20% Similarity=0.263 Sum_probs=167.3
Q ss_pred CCCCcccccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHH
Q 011049 214 HPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF 293 (494)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 293 (494)
.+.|....++.|++++++.|..++++++++-+. ..|+++++|+.. |+.. + ........+
T Consensus 44 vptP~~~n~pye~i~l~T~D~vtL~a~~~~~E~-------S~pTlLyfh~NA-----------GNmG-h--r~~i~~~fy 102 (300)
T KOG4391|consen 44 VPTPKEFNMPYERIELRTRDKVTLDAYLMLSES-------SRPTLLYFHANA-----------GNMG-H--RLPIARVFY 102 (300)
T ss_pred CCCccccCCCceEEEEEcCcceeEeeeeecccC-------CCceEEEEccCC-----------Cccc-c--hhhHHHHHH
Confidence 344555667889999999999999999998332 379999999832 1111 1 111222356
Q ss_pred HhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEE
Q 011049 294 LARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGI 373 (494)
Q Consensus 294 ~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v 373 (494)
.+.+..|+.+++| |||.+..... .+....|..++++||..+...|..+|+++|.|.||..|..+|+.+.+++.|+|
T Consensus 103 ~~l~mnv~ivsYR---GYG~S~Gsps-E~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~i 178 (300)
T KOG4391|consen 103 VNLKMNVLIVSYR---GYGKSEGSPS-EEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAII 178 (300)
T ss_pred HHcCceEEEEEee---ccccCCCCcc-ccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeee
Confidence 7789999996665 6776644322 24457788899999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCCC--CCCCcc--cccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCc
Q 011049 374 ARSGSYNKTL--TPFGFQ--TEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGAL 449 (494)
Q Consensus 374 ~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~ 449 (494)
...-+..... .+.-+. ...-..|-... ..+....+.+.+.|.|++.|.+|..|| +.+.+++++..-...+
T Consensus 179 vENTF~SIp~~~i~~v~p~~~k~i~~lc~kn---~~~S~~ki~~~~~P~LFiSGlkDelVP--P~~Mr~Ly~~c~S~~K- 252 (300)
T KOG4391|consen 179 VENTFLSIPHMAIPLVFPFPMKYIPLLCYKN---KWLSYRKIGQCRMPFLFISGLKDELVP--PVMMRQLYELCPSRTK- 252 (300)
T ss_pred eechhccchhhhhheeccchhhHHHHHHHHh---hhcchhhhccccCceEEeecCccccCC--cHHHHHHHHhCchhhh-
Confidence 8776544211 111010 00001110111 122333455667999999999999998 8999999998876554
Q ss_pred EEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 450 SRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 450 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
++..||++.|+-.. -..-+++.+.+||.+.-..
T Consensus 253 -rl~eFP~gtHNDT~--i~dGYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 253 -RLAEFPDGTHNDTW--ICDGYFQAIEDFLAEVVKS 285 (300)
T ss_pred -hheeCCCCccCceE--EeccHHHHHHHHHHHhccC
Confidence 78999999997432 1236788899999887653
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.9e-18 Score=147.77 Aligned_cols=206 Identities=19% Similarity=0.220 Sum_probs=136.4
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCC-cEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHH--hCCeEEEeCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPL-PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL--ARRFAVLAGPSIPI 308 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~-P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~G~~v~~~~~~~~ 308 (494)
.-|.++.+.+|.|+++++.++ + |+|+|+||+|....+...++.++.. +..++ +-++-|++|.+-..
T Consensus 169 ~tgneLkYrly~Pkdy~pdkk--y~PLvlfLHgagq~g~dn~~~l~sg~g---------aiawa~pedqcfVlAPQy~~i 237 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKK--YYPLVLFLHGAGQGGSDNDKVLSSGIG---------AIAWAGPEDQCFVLAPQYNPI 237 (387)
T ss_pred ccCceeeEEEecccccCCCCc--cccEEEEEecCCCCCchhhhhhhcCcc---------ceeeecccCceEEEccccccc
Confidence 467899999999999999887 5 9999999987443222222211110 00111 23455666443221
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHH-HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCC
Q 011049 309 IGEGDKLPNDRFVEQLVSSAEAAVE-EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG 387 (494)
Q Consensus 309 ~g~g~~~~~~~~~~~~~~d~~~~v~-~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~ 387 (494)
.-..+ . +. .........+++ -|.++..||.+||.++|.|+||++++.++.++|+.|+|++.++|-.+.
T Consensus 238 f~d~e--~--~t-~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~------ 306 (387)
T COG4099 238 FADSE--E--KT-LLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDR------ 306 (387)
T ss_pred ccccc--c--cc-chhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCch------
Confidence 11111 1 11 112233344444 777888999999999999999999999999999999999999985442
Q ss_pred cccccccccccHHHHHhcCccccccCC-CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcC---CCCCccC
Q 011049 388 FQTEFRTLWEATNVYIEMSPITHANKI-KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLP---FEHHVYA 463 (494)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~sp~~~~~~~-~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~---~~~H~~~ 463 (494)
..++..+ +.|+.++|+.+|..+| .++++-+++.|+..+.++.+..|. -.-|++.
T Consensus 307 --------------------v~lv~~lk~~piWvfhs~dDkv~P--v~nSrv~y~~lk~~~~kv~Ytaf~~g~~~~eG~d 364 (387)
T COG4099 307 --------------------VYLVRTLKKAPIWVFHSSDDKVIP--VSNSRVLYERLKALDRKVNYTAFLEGTTVLEGVD 364 (387)
T ss_pred --------------------hhhhhhhccCceEEEEecCCCccc--cCcceeehHHHHhhccccchhhhhhccccccccC
Confidence 1122223 4899999999999998 999999999999998888777665 2234433
Q ss_pred CcccHH--HHHHHHHHHHHH
Q 011049 464 ARENVM--HVIWETDRWLQK 481 (494)
Q Consensus 464 ~~~~~~--~~~~~~~~fl~~ 481 (494)
....+. .-..++.+||-+
T Consensus 365 ~~g~w~atyn~~eaieWLl~ 384 (387)
T COG4099 365 HSGVWWATYNDAEAIEWLLK 384 (387)
T ss_pred CCCcceeecCCHHHHHHHHh
Confidence 222221 223466777754
|
|
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-17 Score=148.61 Aligned_cols=189 Identities=18% Similarity=0.133 Sum_probs=117.8
Q ss_pred EEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCC--C
Q 011049 239 ATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL--P 316 (494)
Q Consensus 239 ~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~--~ 316 (494)
+++|+|++.. +++|+||++||++.... .+... ..+...+.+.||+|++++.++..+.+..+ .
T Consensus 1 ~~ly~P~~~~----~~~P~vv~lHG~~~~~~-----------~~~~~-~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~ 64 (212)
T TIGR01840 1 MYVYVPAGLT----GPRALVLALHGCGQTAS-----------AYVID-WGWKAAADRYGFVLVAPEQTSYNSSNNCWDWF 64 (212)
T ss_pred CEEEcCCCCC----CCCCEEEEeCCCCCCHH-----------HHhhh-cChHHHHHhCCeEEEecCCcCccccCCCCCCC
Confidence 4789998752 34899999999763221 11100 01222334589999998876543221110 0
Q ss_pred Cc---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCC-Cccccc
Q 011049 317 ND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF-GFQTEF 392 (494)
Q Consensus 317 ~~---~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~-~~~~~~ 392 (494)
.. ........|+..+++++.++..+|++||+|+|+|+||++++.++..+|++|++++++++......... ......
T Consensus 65 ~~~~~~~~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~ 144 (212)
T TIGR01840 65 FTHHRARGTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSISATPQM 144 (212)
T ss_pred CccccCCCCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchhhHhhc
Confidence 00 01123467788899999988789999999999999999999999999999999999887532110000 000000
Q ss_pred ccccccHHHHHhc-Cc-cccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhC
Q 011049 393 RTLWEATNVYIEM-SP-ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGH 446 (494)
Q Consensus 393 ~~~~~~~~~~~~~-sp-~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~ 446 (494)
..-.....+.+. .. .....+...|++++||++|.+|| +..+++++++|++.
T Consensus 145 -~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~hG~~D~vVp--~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 145 -CTAATAASVCRLVRGMQSEYNGPTPIMSVVHGDADYTVL--PGNADEIRDAMLKV 197 (212)
T ss_pred -CCCCCHHHHHHHHhccCCcccCCCCeEEEEEcCCCceeC--cchHHHHHHHHHHh
Confidence 000011111110 00 11122234567899999999998 99999999999985
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.3e-18 Score=140.35 Aligned_cols=198 Identities=18% Similarity=0.156 Sum_probs=142.5
Q ss_pred cEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCC--CCCchhHHHHHHHHHHHHH
Q 011049 256 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK--LPNDRFVEQLVSSAEAAVE 333 (494)
Q Consensus 256 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~--~~~~~~~~~~~~d~~~~v~ 333 (494)
-.|+++|| ++|++..+. .....|.++||.|.+|++. |+|.. ..-....++..+|+.++.+
T Consensus 16 ~AVLllHG-----------FTGt~~Dvr----~Lgr~L~e~GyTv~aP~yp---GHG~~~e~fl~t~~~DW~~~v~d~Y~ 77 (243)
T COG1647 16 RAVLLLHG-----------FTGTPRDVR----MLGRYLNENGYTVYAPRYP---GHGTLPEDFLKTTPRDWWEDVEDGYR 77 (243)
T ss_pred EEEEEEec-----------cCCCcHHHH----HHHHHHHHCCceEecCCCC---CCCCCHHHHhcCCHHHHHHHHHHHHH
Confidence 68999998 445554443 3556788899999997764 44433 1112234667889999999
Q ss_pred HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcc----------c-ccc---------
Q 011049 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQ----------T-EFR--------- 393 (494)
Q Consensus 334 ~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~----------~-~~~--------- 393 (494)
+|.+.++ +.|+|.|.||||.+|+.++.++| .+++|.+|+..+......-+. . +..
T Consensus 78 ~L~~~gy---~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~ 152 (243)
T COG1647 78 DLKEAGY---DEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEM 152 (243)
T ss_pred HHHHcCC---CeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHH
Confidence 9999987 78999999999999999999997 688888877665221110000 0 000
Q ss_pred -----cccccHHHHHh--cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcc
Q 011049 394 -----TLWEATNVYIE--MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE 466 (494)
Q Consensus 394 -----~~~~~~~~~~~--~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~ 466 (494)
++|.....+.. ......++.|..|+|+++|.+|+.|| .+.+..++..+... +.++.+|.+.||.+....
T Consensus 153 ~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~--~~sA~~Iy~~v~s~--~KeL~~~e~SgHVIt~D~ 228 (243)
T COG1647 153 KSYKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVP--AESANFIYDHVESD--DKELKWLEGSGHVITLDK 228 (243)
T ss_pred HHhhcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCC--HHHHHHHHHhccCC--cceeEEEccCCceeecch
Confidence 01111111111 12345678899999999999999998 88888888888764 458999999999999888
Q ss_pred cHHHHHHHHHHHHH
Q 011049 467 NVMHVIWETDRWLQ 480 (494)
Q Consensus 467 ~~~~~~~~~~~fl~ 480 (494)
.++.+.+.++.||+
T Consensus 229 Erd~v~e~V~~FL~ 242 (243)
T COG1647 229 ERDQVEEDVITFLE 242 (243)
T ss_pred hHHHHHHHHHHHhh
Confidence 88899999999996
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.1e-17 Score=141.45 Aligned_cols=221 Identities=19% Similarity=0.169 Sum_probs=155.3
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEE
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVL 301 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~ 301 (494)
..+.+..+++.|..+....+.|+.. ..++|++.||--. . ... .......|.. ..+.|+
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~~------~~~~lly~hGNa~-------D-------lgq-~~~~~~~l~~~ln~nv~ 92 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPEA------AHPTLLYSHGNAA-------D-------LGQ-MVELFKELSIFLNCNVV 92 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCccc------cceEEEEcCCccc-------c-------hHH-HHHHHHHHhhcccceEE
Confidence 4667777888888999988888753 2689999998310 0 000 0112223333 589999
Q ss_pred eCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCC
Q 011049 302 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 381 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~ 381 (494)
..|+ .|+|.+.....- ....+|+.++.+||++... .+++|+++|+|+|...++.+|++.| .+++|+.+|+.+.
T Consensus 93 ~~DY---SGyG~S~G~psE-~n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~ 165 (258)
T KOG1552|consen 93 SYDY---SGYGRSSGKPSE-RNLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSG 165 (258)
T ss_pred EEec---ccccccCCCccc-ccchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhh
Confidence 9554 466665433221 2568999999999999876 7799999999999999999999997 8999999998763
Q ss_pred CCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCc
Q 011049 382 TLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV 461 (494)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 461 (494)
.-.-.. ......|- ....-+..+..+++|+|++||++|++|| ..+..++++..++. ++..+..|++|.
T Consensus 166 ~rv~~~--~~~~~~~~-----d~f~~i~kI~~i~~PVLiiHgtdDevv~--~sHg~~Lye~~k~~---~epl~v~g~gH~ 233 (258)
T KOG1552|consen 166 MRVAFP--DTKTTYCF-----DAFPNIEKISKITCPVLIIHGTDDEVVD--FSHGKALYERCKEK---VEPLWVKGAGHN 233 (258)
T ss_pred hhhhcc--CcceEEee-----ccccccCcceeccCCEEEEecccCceec--ccccHHHHHhcccc---CCCcEEecCCCc
Confidence 211110 00011110 1112256677788999999999999998 99999999999865 677788899997
Q ss_pred cCCcccHHHHHHHHHHHHHHhcCC
Q 011049 462 YAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 462 ~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
-. +...++...+..|+..-++.
T Consensus 234 ~~--~~~~~yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 234 DI--ELYPEYIEHLRRFISSVLPS 255 (258)
T ss_pred cc--ccCHHHHHHHHHHHHHhccc
Confidence 54 33346777888888766543
|
|
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.8e-17 Score=151.80 Aligned_cols=225 Identities=18% Similarity=0.162 Sum_probs=151.4
Q ss_pred EcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCC
Q 011049 230 QRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPII 309 (494)
Q Consensus 230 ~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~ 309 (494)
....+..+++.+|.|.. ....+.|+||++|||+|..++ ...+. ......++..|+.|+.++|+-..
T Consensus 57 ~~~~~~~~~~~~y~p~~---~~~~~~p~vly~HGGg~~~g~--------~~~~~---~~~~~~~~~~g~~vv~vdYrlaP 122 (312)
T COG0657 57 AGPSGDGVPVRVYRPDR---KAAATAPVVLYLHGGGWVLGS--------LRTHD---ALVARLAAAAGAVVVSVDYRLAP 122 (312)
T ss_pred cCCCCCceeEEEECCCC---CCCCCCcEEEEEeCCeeeecC--------hhhhH---HHHHHHHHHcCCEEEecCCCCCC
Confidence 33455668899999921 223348999999999875433 22221 12334556799999999987543
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEecChHHHHHHHHHHhCCC----ceeEEEeCCCCCCCC
Q 011049 310 GEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPH----LFCCGIARSGSYNKT 382 (494)
Q Consensus 310 g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~~~p~----~~~a~v~~~~~~~~~ 382 (494)
.+ . ....++|+.+++.|+.++. .+|+++|+|+|+|.||++++.++..-.+ ..++.+.++|+.+..
T Consensus 123 e~-------~-~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 123 EH-------P-FPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLT 194 (312)
T ss_pred CC-------C-CCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCc
Confidence 32 1 2345778889999998773 4899999999999999999998876543 468889999988765
Q ss_pred CCCCCcccccccccc--------cHHHH---------HhcCccccc--cCCCCCEEEEecCCCCCCCCCHHHHHHHHHHH
Q 011049 383 LTPFGFQTEFRTLWE--------ATNVY---------IEMSPITHA--NKIKKPILIIHGEVDDKVGLFPMQAERFFDAL 443 (494)
Q Consensus 383 ~~~~~~~~~~~~~~~--------~~~~~---------~~~sp~~~~--~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l 443 (494)
.....+.......+- ....| ...+|+... .. -.|+++++|+.|.+ ..+++.+.++|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~a~~D~l----~~~~~~~a~~L 269 (312)
T COG0657 195 SSAASLPGYGEADLLDAAAILAWFADLYLGAAPDREDPEASPLASDDLSG-LPPTLIQTAEFDPL----RDEGEAYAERL 269 (312)
T ss_pred ccccchhhcCCccccCHHHHHHHHHHHhCcCccccCCCccCccccccccC-CCCEEEEecCCCcc----hhHHHHHHHHH
Confidence 311111110000000 00001 123444333 22 47899999999998 45899999999
Q ss_pred HhCCCcEEEEEcCCCCCccCCcc--cHHHHHHHHHHHHHH
Q 011049 444 KGHGALSRLVLLPFEHHVYAARE--NVMHVIWETDRWLQK 481 (494)
Q Consensus 444 ~~~g~~~~~~~~~~~~H~~~~~~--~~~~~~~~~~~fl~~ 481 (494)
++.|+++++..+++..|+|.... .....+.++.+|+..
T Consensus 270 ~~agv~~~~~~~~g~~H~f~~~~~~~a~~~~~~~~~~l~~ 309 (312)
T COG0657 270 RAAGVPVELRVYPGMIHGFDLLTGPEARSALRQIAAFLRA 309 (312)
T ss_pred HHcCCeEEEEEeCCcceeccccCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999884322 233456677777763
|
|
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.4e-17 Score=164.77 Aligned_cols=231 Identities=19% Similarity=0.260 Sum_probs=148.0
Q ss_pred EcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCC
Q 011049 230 QRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPII 309 (494)
Q Consensus 230 ~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~ 309 (494)
++.||.+|.+.+++|++ .++.|+||++||-+..... ...........|+++||+|+.++.||.
T Consensus 2 ~~~DG~~L~~~~~~P~~-----~~~~P~Il~~~gyg~~~~~-----------~~~~~~~~~~~l~~~Gy~vv~~D~RG~- 64 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAG-----GGPVPVILSRTPYGKDAGL-----------RWGLDKTEPAWFVAQGYAVVIQDTRGR- 64 (550)
T ss_pred cCCCCCEEEEEEEecCC-----CCCCCEEEEecCCCCchhh-----------ccccccccHHHHHhCCcEEEEEecccc-
Confidence 56799999999999975 2348999999985421100 000111234578999999999777654
Q ss_pred CCCCCCCCchhH-HHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC---C
Q 011049 310 GEGDKLPNDRFV-EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT---P 385 (494)
Q Consensus 310 g~g~~~~~~~~~-~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~---~ 385 (494)
|.+....... ....+|+.++++|+.++.+.+ .||+++|+||||++++.++..+|+.++|+|+.++..+.... .
T Consensus 65 --g~S~g~~~~~~~~~~~D~~~~i~~l~~q~~~~-~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~~~~~~~ 141 (550)
T TIGR00976 65 --GASEGEFDLLGSDEAADGYDLVDWIAKQPWCD-GNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLYRDIAFP 141 (550)
T ss_pred --ccCCCceEecCcccchHHHHHHHHHHhCCCCC-CcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchhHhhccC
Confidence 4443221112 456889999999999998766 69999999999999999999999999999998887663210 0
Q ss_pred CCcccc-------------cc----c---cc----------ccH-------------------------------HHHHh
Q 011049 386 FGFQTE-------------FR----T---LW----------EAT-------------------------------NVYIE 404 (494)
Q Consensus 386 ~~~~~~-------------~~----~---~~----------~~~-------------------------------~~~~~ 404 (494)
-.+... .. . .+ ... +.+..
T Consensus 142 g~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 221 (550)
T TIGR00976 142 GALRLDVLLGWWALLATDSMRPRADDRPPRYAAAARLAQSYDDCQTALSHTPRSSVLALDRFIGWWIQVVDDDYDESWVS 221 (550)
T ss_pred CeeccchhHHHHHhhccccccccccccccchHHHHHHhhhhhhHHHHHhcCCccccccccccchhhhhccCCCCChhhcc
Confidence 000000 00 0 00 000 01111
Q ss_pred cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccC---------CcccHHHHHH--
Q 011049 405 MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA---------ARENVMHVIW-- 473 (494)
Q Consensus 405 ~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~---------~~~~~~~~~~-- 473 (494)
.+....++++++|+|++.|-.|.. ...+.+.++.+.+.+ +.++++=|. .|... .... .....
T Consensus 222 ~~~~~~~~~i~vP~l~~~gw~D~~----~~g~~~~~~~~~~~~-~~~lilGpw-~H~~~~~~~~~~~~g~~~-~~~~~~~ 294 (550)
T TIGR00976 222 ISLWRDLGGSDVPTLVTGGWYDNH----SRGSIRLFLAVHRGG-AQRLVVGPW-THSGLGGRVGDGNYGMAA-LSWVDEA 294 (550)
T ss_pred CchhhHhcCCCCCEEEeCcccCCC----CchHHHHHHHHhhcC-CceEEEccC-CCCCcccccCCCccCccc-cccchhh
Confidence 222335667899999999999953 456677778877654 456665444 57511 1111 11122
Q ss_pred HHHHHHHHhcCCCC
Q 011049 474 ETDRWLQKYCLSNT 487 (494)
Q Consensus 474 ~~~~fl~~~l~~~~ 487 (494)
.+++||++||++..
T Consensus 295 ~~~~wfD~~Lkg~~ 308 (550)
T TIGR00976 295 EQLAFFDRHLKGGT 308 (550)
T ss_pred hhHHHHHHHhCCCC
Confidence 46899999999754
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.9e-16 Score=143.54 Aligned_cols=232 Identities=19% Similarity=0.187 Sum_probs=156.1
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeC
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 303 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 303 (494)
..+-.+.+.||..+....+.+... +..+||++||.+. +.......+..|..+||.|++
T Consensus 9 ~~~~~~~~~d~~~~~~~~~~~~~~------~~g~Vvl~HG~~E---------------h~~ry~~la~~l~~~G~~V~~- 66 (298)
T COG2267 9 RTEGYFTGADGTRLRYRTWAAPEP------PKGVVVLVHGLGE---------------HSGRYEELADDLAARGFDVYA- 66 (298)
T ss_pred cccceeecCCCceEEEEeecCCCC------CCcEEEEecCchH---------------HHHHHHHHHHHHHhCCCEEEE-
Confidence 344567778999999999988741 1379999999642 222223456788999999999
Q ss_pred CCCCCCCCCCCC-CC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC
Q 011049 304 PSIPIIGEGDKL-PN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 379 (494)
Q Consensus 304 ~~~~~~g~g~~~-~~---~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 379 (494)
.+.+|+|.+. .. ...+.+.+.|+...++.+.... -..+++++||||||.+++.++.+++..++++|+.+|++
T Consensus 67 --~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~--~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~ 142 (298)
T COG2267 67 --LDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPD--PGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPAL 142 (298)
T ss_pred --ecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccC--CCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccc
Confidence 4455666663 11 1224566777777777776541 13689999999999999999999999999999999987
Q ss_pred CCCC--C-----------------CCCccc----cccccc--ccHH--HHHhcCc-----------------------cc
Q 011049 380 NKTL--T-----------------PFGFQT----EFRTLW--EATN--VYIEMSP-----------------------IT 409 (494)
Q Consensus 380 ~~~~--~-----------------~~~~~~----~~~~~~--~~~~--~~~~~sp-----------------------~~ 409 (494)
.... . .+.+.. .....| .+++ .....+| ..
T Consensus 143 ~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~ 222 (298)
T COG2267 143 GLGGAILRLILARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALR 222 (298)
T ss_pred cCChhHHHHHHHHHhcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchh
Confidence 6431 0 011111 000000 0110 0111122 11
Q ss_pred cccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCc-EEEEEcCCCCCccCCcccH--HHHHHHHHHHHHHhcCC
Q 011049 410 HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGAL-SRLVLLPFEHHVYAARENV--MHVIWETDRWLQKYCLS 485 (494)
Q Consensus 410 ~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~-~~~~~~~~~~H~~~~~~~~--~~~~~~~~~fl~~~l~~ 485 (494)
...++++|+|+++|++|.+|+ . .....+.+++.+.+ .++.+|+|+.|.+...... +.+++.+.+||.+++..
T Consensus 223 ~~~~~~~PvLll~g~~D~vv~--~--~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~~ 297 (298)
T COG2267 223 DAPAIALPVLLLQGGDDRVVD--N--VEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALPS 297 (298)
T ss_pred ccccccCCEEEEecCCCcccc--C--cHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhccC
Confidence 245678999999999999975 3 33444444555544 6999999999998877776 88999999999988753
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.6e-16 Score=151.96 Aligned_cols=151 Identities=12% Similarity=0.043 Sum_probs=121.0
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
+.+||++|+ .+++.++||..+.....|.|||||+.|+|....++ +.+||+++++++ +.++||...+.+ .
T Consensus 212 ~~~Iyv~dl---~tg~~~~lt~~~g~~~~~~~SPDG~~la~~~~~~g-~~~Iy~~dl~~g--~~~~LT~~~~~d-----~ 280 (419)
T PRK04043 212 KPTLYKYNL---YTGKKEKIASSQGMLVVSDVSKDGSKLLLTMAPKG-QPDIYLYDTNTK--TLTQITNYPGID-----V 280 (419)
T ss_pred CCEEEEEEC---CCCcEEEEecCCCcEEeeEECCCCCEEEEEEccCC-CcEEEEEECCCC--cEEEcccCCCcc-----C
Confidence 458999999 89999999987777778999999999999987766 789999999988 889999876543 4
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.|. |||||++|+|.+.. ...++||++|+++|+.++++..... ...|
T Consensus 281 ~p~--~SPDG~~I~F~Sdr------------------~g~~~Iy~~dl~~g~~~rlt~~g~~--------------~~~~ 326 (419)
T PRK04043 281 NGN--FVEDDKRIVFVSDR------------------LGYPNIFMKKLNSGSVEQVVFHGKN--------------NSSV 326 (419)
T ss_pred ccE--ECCCCCEEEEEECC------------------CCCceEEEEECCCCCeEeCccCCCc--------------CceE
Confidence 455 99999999999732 2235799999999998887653211 2379
Q ss_pred cccCcEEEEEEecCC-----CCCeEEEEEcCCCceeEeecC
Q 011049 177 NLNQLKILTSKESKT-----EITQYHILSWPLKKSSQITNF 212 (494)
Q Consensus 177 s~d~~~~~~~~~s~~-----~p~~l~~~~~~~~~~~~lt~~ 212 (494)
||||+.++++..... ...+||++++++++.++|+..
T Consensus 327 SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~LT~~ 367 (419)
T PRK04043 327 STYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIRRLTAN 367 (419)
T ss_pred CCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeEECCCC
Confidence 999999999875432 235899999999998888863
|
|
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.8e-16 Score=148.28 Aligned_cols=226 Identities=19% Similarity=0.217 Sum_probs=131.5
Q ss_pred ccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchh-HHHHHhCCeE
Q 011049 221 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTS-SLIFLARRFA 299 (494)
Q Consensus 221 ~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~G~~ 299 (494)
....++++++-. |.+|++++.+|++ .+|+|+||++-|. +.+..-.... ...|+.+|++
T Consensus 162 ~~~i~~v~iP~e-g~~I~g~LhlP~~-----~~p~P~VIv~gGl---------------Ds~qeD~~~l~~~~l~~rGiA 220 (411)
T PF06500_consen 162 DYPIEEVEIPFE-GKTIPGYLHLPSG-----EKPYPTVIVCGGL---------------DSLQEDLYRLFRDYLAPRGIA 220 (411)
T ss_dssp SSEEEEEEEEET-TCEEEEEEEESSS-----SS-EEEEEEE--T---------------TS-GGGGHHHHHCCCHHCT-E
T ss_pred CCCcEEEEEeeC-CcEEEEEEEcCCC-----CCCCCEEEEeCCc---------------chhHHHHHHHHHHHHHhCCCE
Confidence 456889999854 5899999999984 3458999987552 1121111111 1246789999
Q ss_pred EEeCCCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC
Q 011049 300 VLAGPSIPIIGEGDKLPN-DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 300 v~~~~~~~~~g~g~~~~~-~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 378 (494)
+++.+. ++.|+.....- .+. +.. ..++++||.+.++||.+||+++|.|+||+.+..+|..++++++++|+..|+
T Consensus 221 ~LtvDm-PG~G~s~~~~l~~D~-~~l---~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~ 295 (411)
T PF06500_consen 221 MLTVDM-PGQGESPKWPLTQDS-SRL---HQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAP 295 (411)
T ss_dssp EEEE---TTSGGGTTT-S-S-C-CHH---HHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES--
T ss_pred EEEEcc-CCCcccccCCCCcCH-HHH---HHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCch
Confidence 999554 33333221111 111 111 347789999999999999999999999999999998888999999999987
Q ss_pred CCCCCCCCCcccc------------cccccccH----HHHHhcCccc--cc--cCCCCCEEEEecCCCCCCCCCHHHHHH
Q 011049 379 YNKTLTPFGFQTE------------FRTLWEAT----NVYIEMSPIT--HA--NKIKKPILIIHGEVDDKVGLFPMQAER 438 (494)
Q Consensus 379 ~~~~~~~~~~~~~------------~~~~~~~~----~~~~~~sp~~--~~--~~~~~P~li~~G~~D~~v~~~~~~~~~ 438 (494)
++..+........ .+..-.+. ..+...|... .+ .+.++|+|.+.|++|+++| .++++.
T Consensus 296 vh~~ft~~~~~~~~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P--~eD~~l 373 (411)
T PF06500_consen 296 VHHFFTDPEWQQRVPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSP--IEDSRL 373 (411)
T ss_dssp -SCGGH-HHHHTTS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS---HHHHHH
T ss_pred HhhhhccHHHHhcCCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCC--HHHHHH
Confidence 6643321110000 00000011 1123344433 23 5567999999999999987 777644
Q ss_pred HHHHHHhCCCcEEEEEcCCCC-CccCCcccHHHHHHHHHHHHHHhc
Q 011049 439 FFDALKGHGALSRLVLLPFEH-HVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 439 ~~~~l~~~g~~~~~~~~~~~~-H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
++. .+.+-+...++... | ......+..+.+||++.|
T Consensus 374 ia~----~s~~gk~~~~~~~~~~-----~gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 374 IAE----SSTDGKALRIPSKPLH-----MGYPQALDEIYKWLEDKL 410 (411)
T ss_dssp HHH----TBTT-EEEEE-SSSHH-----HHHHHHHHHHHHHHHHHH
T ss_pred HHh----cCCCCceeecCCCccc-----cchHHHHHHHHHHHHHhc
Confidence 333 33334555555433 3 334578889999999875
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-15 Score=135.51 Aligned_cols=132 Identities=30% Similarity=0.346 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHH
Q 011049 322 EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNV 401 (494)
Q Consensus 322 ~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (494)
....+-+.+.++...+.+ ++++||+++|+|.||.+++.++.++|+.+.++|+++|.......
T Consensus 84 ~~s~~~l~~li~~~~~~~-i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~----------------- 145 (216)
T PF02230_consen 84 EESAERLDELIDEEVAYG-IDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESE----------------- 145 (216)
T ss_dssp HHHHHHHHHHHHHHHHTT---GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCC-----------------
T ss_pred HHHHHHHHHHHHHHHHcC-CChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccc-----------------
Confidence 334455566666666665 89999999999999999999999999999999999986431100
Q ss_pred HHhcCccccccCC-CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 402 YIEMSPITHANKI-KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 402 ~~~~sp~~~~~~~-~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
........ ++|++++||..|++|| ...+++..+.|++.+.++++..|++.+|.+.. +.+..+.+||.
T Consensus 146 -----~~~~~~~~~~~pi~~~hG~~D~vvp--~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~~-----~~~~~~~~~l~ 213 (216)
T PF02230_consen 146 -----LEDRPEALAKTPILIIHGDEDPVVP--FEWAEKTAEFLKAAGANVEFHEYPGGGHEISP-----EELRDLREFLE 213 (216)
T ss_dssp -----CHCCHCCCCTS-EEEEEETT-SSST--HHHHHHHHHHHHCTT-GEEEEEETT-SSS--H-----HHHHHHHHHHH
T ss_pred -----ccccccccCCCcEEEEecCCCCccc--HHHHHHHHHHHHhcCCCEEEEEcCCCCCCCCH-----HHHHHHHHHHh
Confidence 00011111 6899999999999998 99999999999999999999999999998763 66788999999
Q ss_pred Hhc
Q 011049 481 KYC 483 (494)
Q Consensus 481 ~~l 483 (494)
+++
T Consensus 214 ~~~ 216 (216)
T PF02230_consen 214 KHI 216 (216)
T ss_dssp HH-
T ss_pred hhC
Confidence 874
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.9e-17 Score=148.10 Aligned_cols=154 Identities=18% Similarity=0.244 Sum_probs=93.3
Q ss_pred cccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcc---cCCCCccCCCCchhHHHHHhC
Q 011049 220 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQV---RGSPNEFSGMTPTSSLIFLAR 296 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~ 296 (494)
..+..|.+.|.+.++..++++++.|++. ++|.|+||.+||.+...-.-.+.. ......+..........|+.+
T Consensus 84 dGY~~EKv~f~~~p~~~vpaylLvPd~~----~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~ 159 (390)
T PF12715_consen 84 DGYTREKVEFNTTPGSRVPAYLLVPDGA----KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKR 159 (390)
T ss_dssp TTEEEEEEEE--STTB-EEEEEEEETT------S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTT
T ss_pred CCeEEEEEEEEccCCeeEEEEEEecCCC----CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhC
Confidence 4567899999999999999999999974 467999999998754321100000 000011222223456789999
Q ss_pred CeEEEeCCCCCCCCCCCCCC-------------------CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHH
Q 011049 297 RFAVLAGPSIPIIGEGDKLP-------------------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFM 357 (494)
Q Consensus 297 G~~v~~~~~~~~~g~g~~~~-------------------~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~ 357 (494)
||+|+++|..+...++.... +..+......|.+.++|||.+++.||++||+++|+|+||+.
T Consensus 160 GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~ 239 (390)
T PF12715_consen 160 GYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYR 239 (390)
T ss_dssp TSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHH
T ss_pred CCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHH
Confidence 99999977654322222110 01112223556678999999999999999999999999999
Q ss_pred HHHHHHhCCCceeEEEeCCCC
Q 011049 358 TAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 358 a~~~~~~~p~~~~a~v~~~~~ 378 (494)
++++++.. ++++++|+.+-+
T Consensus 240 a~~LaALD-dRIka~v~~~~l 259 (390)
T PF12715_consen 240 AWWLAALD-DRIKATVANGYL 259 (390)
T ss_dssp HHHHHHH--TT--EEEEES-B
T ss_pred HHHHHHcc-hhhHhHhhhhhh
Confidence 99999998 788888865443
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.7e-16 Score=144.53 Aligned_cols=213 Identities=24% Similarity=0.307 Sum_probs=133.8
Q ss_pred CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCC
Q 011049 233 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 312 (494)
Q Consensus 233 dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g 312 (494)
||++|.+.+|+| +.. ..+++|+||..|+-+.... ..................|+++||+|+..+.||. |
T Consensus 1 DGv~L~adv~~P-~~~--~~~~~P~il~~tpY~~~~~-----~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~---g 69 (272)
T PF02129_consen 1 DGVRLAADVYRP-GAD--GGGPFPVILTRTPYGKGDQ-----TASDLAGANPGPPSARRPFAERGYAVVVQDVRGT---G 69 (272)
T ss_dssp TS-EEEEEEEEE---T--TSSSEEEEEEEESSTCTC------HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTS---T
T ss_pred CCCEEEEEEEec-CCC--CCCcccEEEEccCcCCCCC-----cccchhhhhcccchhHHHHHhCCCEEEEECCccc---c
Confidence 799999999999 322 2456999999986321000 0000000000000011238999999999777654 4
Q ss_pred CCCCCchh-HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC-C--CCc
Q 011049 313 DKLPNDRF-VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT-P--FGF 388 (494)
Q Consensus 313 ~~~~~~~~-~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~-~--~~~ 388 (494)
.+...... ......|..++|+|+.++++.+ .||+++|.||+|+.++.+|+..|..+||+++..+..|.... . -+.
T Consensus 70 ~S~G~~~~~~~~e~~D~~d~I~W~~~Qpws~-G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG~ 148 (272)
T PF02129_consen 70 GSEGEFDPMSPNEAQDGYDTIEWIAAQPWSN-GKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGGA 148 (272)
T ss_dssp TS-S-B-TTSHHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETTE
T ss_pred cCCCccccCChhHHHHHHHHHHHHHhCCCCC-CeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCCc
Confidence 34333222 5667899999999999998755 69999999999999999999888899999999888774431 0 000
Q ss_pred ccc-ccccc----------------------------------------------------ccHHHHHhcCccccccCCC
Q 011049 389 QTE-FRTLW----------------------------------------------------EATNVYIEMSPITHANKIK 415 (494)
Q Consensus 389 ~~~-~~~~~----------------------------------------------------~~~~~~~~~sp~~~~~~~~ 415 (494)
... ....| ...+.+.+.++...+.+++
T Consensus 149 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~i~ 228 (272)
T PF02129_consen 149 FRLGFFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDKID 228 (272)
T ss_dssp EBCCHHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG--
T ss_pred ccccchhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhhCC
Confidence 000 00000 0112334445555678999
Q ss_pred CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC-CcEEEEEcCCCCCc
Q 011049 416 KPILIIHGEVDDKVGLFPMQAERFFDALKGHG-ALSRLVLLPFEHHV 461 (494)
Q Consensus 416 ~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g-~~~~~~~~~~~~H~ 461 (494)
+|+|+++|..|... ...+.+.+++|++.+ ++.++++-|. +|.
T Consensus 229 vP~l~v~Gw~D~~~---~~~~~~~~~~l~~~~~~~~~Liigpw-~H~ 271 (272)
T PF02129_consen 229 VPVLIVGGWYDTLF---LRGALRAYEALRAPGSKPQRLIIGPW-THG 271 (272)
T ss_dssp SEEEEEEETTCSST---SHHHHHHHHHHCTTSTC-EEEEEESE-STT
T ss_pred CCEEEecccCCccc---chHHHHHHHHhhcCCCCCCEEEEeCC-CCC
Confidence 99999999999765 478899999999988 7778888776 564
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.2e-16 Score=142.51 Aligned_cols=181 Identities=20% Similarity=0.153 Sum_probs=121.3
Q ss_pred EEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 011049 258 LFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVV 336 (494)
Q Consensus 258 vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~ 336 (494)
||++|||+|..+.... . ......+++ +|++|+.++|+-... . .....++|+.++++|+.
T Consensus 1 v~~~HGGg~~~g~~~~--------~----~~~~~~la~~~g~~v~~~~Yrl~p~-------~-~~p~~~~D~~~a~~~l~ 60 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKES--------H----WPFAARLAAERGFVVVSIDYRLAPE-------A-PFPAALEDVKAAYRWLL 60 (211)
T ss_dssp EEEE--STTTSCGTTT--------H----HHHHHHHHHHHTSEEEEEE---TTT-------S-STTHHHHHHHHHHHHHH
T ss_pred CEEECCcccccCChHH--------H----HHHHHHHHhhccEEEEEeecccccc-------c-cccccccccccceeeec
Confidence 7899999976543221 1 234445665 999999988864321 1 22467899999999999
Q ss_pred Hc---CCCCCCcEEEEecChHHHHHHHHHHhCCC----ceeEEEeCCCCCCC-CCCCCCcc----ccccccccc------
Q 011049 337 RR---GVADPSRIAVGGHSYGAFMTAHLLAHAPH----LFCCGIARSGSYNK-TLTPFGFQ----TEFRTLWEA------ 398 (494)
Q Consensus 337 ~~---~~~d~~ri~i~G~S~GG~~a~~~~~~~p~----~~~a~v~~~~~~~~-~~~~~~~~----~~~~~~~~~------ 398 (494)
++ ..+|+++|+|+|+|.||.+++.++....+ .++++++++|+.+. ........ ......+..
T Consensus 61 ~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (211)
T PF07859_consen 61 KNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWF 140 (211)
T ss_dssp HTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHH
T ss_pred cccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccccccccccccccccc
Confidence 97 24789999999999999999999875433 48999999998765 21111110 000001100
Q ss_pred HHHH--------HhcCccccccCC--CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccC
Q 011049 399 TNVY--------IEMSPITHANKI--KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA 463 (494)
Q Consensus 399 ~~~~--------~~~sp~~~~~~~--~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 463 (494)
.+.| ...+|+.. ..+ -+|+++++|+.|.. ..++..++++|++.|++++++++++..|.|.
T Consensus 141 ~~~~~~~~~~~~~~~sp~~~-~~~~~~Pp~~i~~g~~D~l----~~~~~~~~~~L~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 141 WKLYLPGSDRDDPLASPLNA-SDLKGLPPTLIIHGEDDVL----VDDSLRFAEKLKKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp HHHHHSTGGTTSTTTSGGGS-SCCTTCHEEEEEEETTSTT----HHHHHHHHHHHHHTT-EEEEEEETTEETTGG
T ss_pred cccccccccccccccccccc-cccccCCCeeeeccccccc----hHHHHHHHHHHHHCCCCEEEEEECCCeEEee
Confidence 0111 12455554 123 36899999999986 6788999999999999999999999999874
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.2e-15 Score=139.48 Aligned_cols=229 Identities=14% Similarity=0.070 Sum_probs=140.7
Q ss_pred EEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCC
Q 011049 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 304 (494)
Q Consensus 225 ~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 304 (494)
+.+.|. .+|.++.++++.|.+. + .+.||++|||+... .+. +. .....+..|+++||.|+++|
T Consensus 3 ~~~~~~-~~~~~l~g~~~~p~~~---~---~~~vv~i~gg~~~~-------~g~---~~-~~~~la~~l~~~G~~v~~~D 64 (274)
T TIGR03100 3 RALTFS-CEGETLVGVLHIPGAS---H---TTGVLIVVGGPQYR-------VGS---HR-QFVLLARRLAEAGFPVLRFD 64 (274)
T ss_pred eeEEEE-cCCcEEEEEEEcCCCC---C---CCeEEEEeCCcccc-------CCc---hh-HHHHHHHHHHHCCCEEEEeC
Confidence 457777 4578999999999752 1 35667677653110 011 11 11234567888999999966
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC
Q 011049 305 SIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT 384 (494)
Q Consensus 305 ~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~ 384 (494)
.+ |+|.+............|+.++++++.++. ...++|.++|||+||++++.++... .+++++|+++|.......
T Consensus 65 l~---G~G~S~~~~~~~~~~~~d~~~~~~~l~~~~-~g~~~i~l~G~S~Gg~~a~~~a~~~-~~v~~lil~~p~~~~~~~ 139 (274)
T TIGR03100 65 YR---GMGDSEGENLGFEGIDADIAAAIDAFREAA-PHLRRIVAWGLCDAASAALLYAPAD-LRVAGLVLLNPWVRTEAA 139 (274)
T ss_pred CC---CCCCCCCCCCCHHHHHHHHHHHHHHHHhhC-CCCCcEEEEEECHHHHHHHHHhhhC-CCccEEEEECCccCCccc
Confidence 54 566554332234566789999999998752 1226799999999999999887664 789999999987442110
Q ss_pred C-C-Cccc------ccccc--------cccH---HHHHh----c---Cc-----------cccccCCCCCEEEEecCCCC
Q 011049 385 P-F-GFQT------EFRTL--------WEAT---NVYIE----M---SP-----------ITHANKIKKPILIIHGEVDD 427 (494)
Q Consensus 385 ~-~-~~~~------~~~~~--------~~~~---~~~~~----~---sp-----------~~~~~~~~~P~li~~G~~D~ 427 (494)
. . .... ..... |+.. ..+.. . .+ ...+.++++|+|+++|..|.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~ 219 (274)
T TIGR03100 140 QAASRIRHYYLGQLLSADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDL 219 (274)
T ss_pred chHHHHHHHHHHHHhChHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcch
Confidence 0 0 0000 00011 1100 01110 1 00 12244678999999999998
Q ss_pred CCCCCHHH-----HHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 428 KVGLFPMQ-----AERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 428 ~v~~~~~~-----~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
..+ ... +..+.+.+.. ..+++.++++++|.+.....+..+.+.+.+||+
T Consensus 220 ~~~--~~~~~~~~~~~~~~~l~~--~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 220 TAQ--EFADSVLGEPAWRGALED--PGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred hHH--HHHHHhccChhhHHHhhc--CCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 642 111 0222222332 347899999999988766777889999999995
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.5e-15 Score=137.27 Aligned_cols=233 Identities=14% Similarity=0.086 Sum_probs=152.3
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHH-HhCCeEEEe
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF-LARRFAVLA 302 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~G~~v~~ 302 (494)
...+.+. ....+..++|+|....+.+ ..|+|||+|||||..++... .....+...+ .+.+.+|+.
T Consensus 63 ~~dv~~~--~~~~l~vRly~P~~~~~~~--~~p~lvyfHGGGf~~~S~~~----------~~y~~~~~~~a~~~~~vvvS 128 (336)
T KOG1515|consen 63 SKDVTID--PFTNLPVRLYRPTSSSSET--KLPVLVYFHGGGFCLGSANS----------PAYDSFCTRLAAELNCVVVS 128 (336)
T ss_pred eeeeEec--CCCCeEEEEEcCCCCCccc--CceEEEEEeCCccEeCCCCC----------chhHHHHHHHHHHcCeEEEe
Confidence 3444444 4456999999998765522 38999999999986543221 1112233344 458999999
Q ss_pred CCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc----CCCCCCcEEEEecChHHHHHHHHHHhC------CCceeEE
Q 011049 303 GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR----GVADPSRIAVGGHSYGAFMTAHLLAHA------PHLFCCG 372 (494)
Q Consensus 303 ~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~----~~~d~~ri~i~G~S~GG~~a~~~~~~~------p~~~~a~ 372 (494)
++||-...+ ......+|..+++.|+.++ ..+|++||+|+|-|.||.+|..++.+. +-.+++.
T Consensus 129 VdYRLAPEh--------~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ 200 (336)
T KOG1515|consen 129 VDYRLAPEH--------PFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQ 200 (336)
T ss_pred cCcccCCCC--------CCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEE
Confidence 888744322 1133467788888888875 348999999999999999998887653 3478999
Q ss_pred EeCCCCCCCCCCCC-Ccc----cccccccccHHHHH----------h----cCccc-----cccCCC-CCEEEEecCCCC
Q 011049 373 IARSGSYNKTLTPF-GFQ----TEFRTLWEATNVYI----------E----MSPIT-----HANKIK-KPILIIHGEVDD 427 (494)
Q Consensus 373 v~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~----------~----~sp~~-----~~~~~~-~P~li~~G~~D~ 427 (494)
|++.|++......- .++ ......+...+.++ . .+|.. ...... .|+|++.++.|.
T Consensus 201 ili~P~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~ 280 (336)
T KOG1515|consen 201 ILIYPFFQGTDRTESEKQQNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDV 280 (336)
T ss_pred EEEecccCCCCCCCHHHHHhhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchh
Confidence 99999876322111 000 00000000111111 1 12222 111222 569999999999
Q ss_pred CCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCc----ccHHHHHHHHHHHHHHh
Q 011049 428 KVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQKY 482 (494)
Q Consensus 428 ~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~fl~~~ 482 (494)
+ .+++..++++|++.|+++++..++++.|++... ......+..+.+|+.+.
T Consensus 281 L----~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 281 L----RDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred h----hhhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 8 688999999999999999999999999996432 23456677788888754
|
|
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.1e-16 Score=134.10 Aligned_cols=190 Identities=22% Similarity=0.217 Sum_probs=114.2
Q ss_pred EEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEEeCCCCCCCCCCCC-
Q 011049 237 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDK- 314 (494)
Q Consensus 237 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g~~- 314 (494)
|.+.||.|++... ++.|+||++||.+... ..+.... ....+++ +||+|+.|...........
T Consensus 1 l~Y~lYvP~~~~~---~~~PLVv~LHG~~~~a-----------~~~~~~s--~~~~lAd~~GfivvyP~~~~~~~~~~cw 64 (220)
T PF10503_consen 1 LSYRLYVPPGAPR---GPVPLVVVLHGCGQSA-----------EDFAAGS--GWNALADREGFIVVYPEQSRRANPQGCW 64 (220)
T ss_pred CcEEEecCCCCCC---CCCCEEEEeCCCCCCH-----------HHHHhhc--CHHHHhhcCCeEEEcccccccCCCCCcc
Confidence 4578999997532 3489999999975321 1121111 1123454 7999998654211000000
Q ss_pred -CCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC-CCC-cc
Q 011049 315 -LPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT-PFG-FQ 389 (494)
Q Consensus 315 -~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~-~~~-~~ 389 (494)
+.. ..........+.+.++++.++..+|++||++.|+|.||.|+..+++.+|++|+++..++|+.--... ... +.
T Consensus 65 ~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a~~ 144 (220)
T PF10503_consen 65 NWFSDDQQRGGGDVAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASALS 144 (220)
T ss_pred cccccccccCccchhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccHHH
Confidence 000 1111223556678889999998999999999999999999999999999999999998886321100 000 00
Q ss_pred cccccccccHHHHHhcCccccc-cCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhC
Q 011049 390 TEFRTLWEATNVYIEMSPITHA-NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGH 446 (494)
Q Consensus 390 ~~~~~~~~~~~~~~~~sp~~~~-~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~ 446 (494)
......-..+..... ..... ..-..|++++||+.|..|. +.+..++.+++...
T Consensus 145 ~m~~g~~~~p~~~~~--a~~~~g~~~~~P~~v~hG~~D~tV~--~~n~~~~~~q~~~~ 198 (220)
T PF10503_consen 145 AMRSGPRPAPAAAWG--ARSDAGAYPGYPRIVFHGTADTTVN--PQNADQLVAQWLNV 198 (220)
T ss_pred HhhCCCCCChHHHHH--hhhhccCCCCCCEEEEecCCCCccC--cchHHHHHHHHHHc
Confidence 000000001111100 00000 1113699999999999998 88898888888763
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.7e-15 Score=145.39 Aligned_cols=246 Identities=15% Similarity=0.073 Sum_probs=157.4
Q ss_pred cccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCC--chhHHHHHhCC
Q 011049 220 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMT--PTSSLIFLARR 297 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~G 297 (494)
..++.|+..+++.||..+....+.+..... ...+.|+|+++||.+.++ ..|.... ...+..|+++|
T Consensus 40 ~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~-~~~~~~~Vll~HGl~~ss-----------~~w~~~~~~~sla~~La~~G 107 (395)
T PLN02872 40 AGYSCTEHTIQTKDGYLLALQRVSSRNPRL-GSQRGPPVLLQHGLFMAG-----------DAWFLNSPEQSLGFILADHG 107 (395)
T ss_pred cCCCceEEEEECCCCcEEEEEEcCCCCCCC-CCCCCCeEEEeCcccccc-----------cceeecCcccchHHHHHhCC
Confidence 357789999999999999887775432111 112357899999965322 2232111 12344678999
Q ss_pred eEEEeCCCCCCCC-CCCCC--------CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC-
Q 011049 298 FAVLAGPSIPIIG-EGDKL--------PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH- 367 (494)
Q Consensus 298 ~~v~~~~~~~~~g-~g~~~--------~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~- 367 (494)
|.|+.+|.||... +|... ....+.+....|+.++++++.+.. .+++.++|||+||.+++.++ .+|+
T Consensus 108 ydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~---~~~v~~VGhS~Gg~~~~~~~-~~p~~ 183 (395)
T PLN02872 108 FDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT---NSKIFIVGHSQGTIMSLAAL-TQPNV 183 (395)
T ss_pred CCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc---CCceEEEEECHHHHHHHHHh-hChHH
Confidence 9999988876421 22111 112233344589999999998753 36899999999999998555 5665
Q ss_pred --ceeEEEeCCCCCCCCC--------------------------CCCC----------cccc------------------
Q 011049 368 --LFCCGIARSGSYNKTL--------------------------TPFG----------FQTE------------------ 391 (494)
Q Consensus 368 --~~~a~v~~~~~~~~~~--------------------------~~~~----------~~~~------------------ 391 (494)
+++++++.+|+..... .+.. +...
T Consensus 184 ~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n 263 (395)
T PLN02872 184 VEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFN 263 (395)
T ss_pred HHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccc
Confidence 5677777666521000 0000 0000
Q ss_pred -----------------------------------cccccccHHHHHh-cCccccccCC--CCCEEEEecCCCCCCCCCH
Q 011049 392 -----------------------------------FRTLWEATNVYIE-MSPITHANKI--KKPILIIHGEVDDKVGLFP 433 (494)
Q Consensus 392 -----------------------------------~~~~~~~~~~~~~-~sp~~~~~~~--~~P~li~~G~~D~~v~~~~ 433 (494)
......+...|.. .-|...+.++ ++|+++++|++|..++ +
T Consensus 264 ~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~--~ 341 (395)
T PLN02872 264 ASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLAD--V 341 (395)
T ss_pred hhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCC--H
Confidence 0000011122222 2345567888 5799999999999987 8
Q ss_pred HHHHHHHHHHHhCCCcEEEEEcCCCCCc--cCCcccHHHHHHHHHHHHHHhcCCC
Q 011049 434 MQAERFFDALKGHGALSRLVLLPFEHHV--YAARENVMHVIWETDRWLQKYCLSN 486 (494)
Q Consensus 434 ~~~~~~~~~l~~~g~~~~~~~~~~~~H~--~~~~~~~~~~~~~~~~fl~~~l~~~ 486 (494)
...+.+.+.|.. ..++..+++.+|. +...+..+.+++.+++||+++++..
T Consensus 342 ~dv~~l~~~Lp~---~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~~~ 393 (395)
T PLN02872 342 TDVEHTLAELPS---KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGKSS 393 (395)
T ss_pred HHHHHHHHHCCC---ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhhcc
Confidence 887777777753 2478889999997 4456777889999999999887654
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.6e-15 Score=140.94 Aligned_cols=236 Identities=16% Similarity=0.133 Sum_probs=144.6
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccC-------------CCCccCCCCchhHHHHHh
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRG-------------SPNEFSGMTPTSSLIFLA 295 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~l~~ 295 (494)
+++.||.+|..+.+.|++ +..+|+++||-+...... .+.. .+.++..+...++..|.+
T Consensus 2 ~~~~~g~~l~~~~~~~~~-------~kg~v~i~HG~~eh~~~~--~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~ 72 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKN-------AIGIIVLIHGLKSHLRLQ--FLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNK 72 (332)
T ss_pred ccCCCCCeEEEeeeeccC-------CeEEEEEECCCchhhhhh--hhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHH
Confidence 566799999999998852 257999999954332110 0000 000110011234678899
Q ss_pred CCeEEEeCCCCCCCCCCCCCCC---c---hhHHHHHHHHHHHHHHHHHc------------------CCCCCCcEEEEec
Q 011049 296 RRFAVLAGPSIPIIGEGDKLPN---D---RFVEQLVSSAEAAVEEVVRR------------------GVADPSRIAVGGH 351 (494)
Q Consensus 296 ~G~~v~~~~~~~~~g~g~~~~~---~---~~~~~~~~d~~~~v~~l~~~------------------~~~d~~ri~i~G~ 351 (494)
+||.|++.|.+ |+|.+... . ...++.++|+...++.+.+. ..-...+++|+||
T Consensus 73 ~G~~V~~~D~r---GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~Gh 149 (332)
T TIGR01607 73 NGYSVYGLDLQ---GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGL 149 (332)
T ss_pred CCCcEEEeccc---ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeec
Confidence 99999995554 55544321 1 23466788888888877652 1111357999999
Q ss_pred ChHHHHHHHHHHhCCC--------ceeEEEeCCCCCCCCCC--------C----------------CCcccccccccc-c
Q 011049 352 SYGAFMTAHLLAHAPH--------LFCCGIARSGSYNKTLT--------P----------------FGFQTEFRTLWE-A 398 (494)
Q Consensus 352 S~GG~~a~~~~~~~p~--------~~~a~v~~~~~~~~~~~--------~----------------~~~~~~~~~~~~-~ 398 (494)
||||.+++.++...++ .++++|+.+|+...... . ..........+. .
T Consensus 150 SmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~ 229 (332)
T TIGR01607 150 SMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPY 229 (332)
T ss_pred cCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChh
Confidence 9999999988865432 58888888876421100 0 000000000000 0
Q ss_pred HHHHHhcCc----------------------cccccCC--CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEE
Q 011049 399 TNVYIEMSP----------------------ITHANKI--KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVL 454 (494)
Q Consensus 399 ~~~~~~~sp----------------------~~~~~~~--~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~ 454 (494)
.......+| ...+.++ ++|+|++||++|..++ +..+..+++.+.. .+.++.+
T Consensus 230 ~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~--~~~~~~~~~~~~~--~~~~l~~ 305 (332)
T TIGR01607 230 VNDIIKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCS--YEGTVSFYNKLSI--SNKELHT 305 (332)
T ss_pred hhhHHhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccC--HHHHHHHHHhccC--CCcEEEE
Confidence 000000111 1123445 6899999999999998 8888877776644 3467889
Q ss_pred cCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 455 LPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 455 ~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
|++++|.+........+++.+.+||+
T Consensus 306 ~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 306 LEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred ECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 99999998876667889999999985
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.5e-15 Score=146.77 Aligned_cols=152 Identities=14% Similarity=0.122 Sum_probs=119.4
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
++.+||++|. +|..++++|.+......|+|||||+.|+|.+..++ ..++|++++++| +.++++...+..
T Consensus 177 ~~~~l~~~d~---dg~~~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g-~~~i~i~dl~~G--~~~~l~~~~~~~----- 245 (429)
T PRK03629 177 FPYELRVSDY---DGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESG-RSALVIQTLANG--AVRQVASFPRHN----- 245 (429)
T ss_pred cceeEEEEcC---CCCCCEEeecCCCceeeeEEcCCCCEEEEEEecCC-CcEEEEEECCCC--CeEEccCCCCCc-----
Confidence 4568999999 88899999998878889999999999999987655 678999999987 788888765543
Q ss_pred CCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccc
Q 011049 96 GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEED 175 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~ 175 (494)
..|. |||||++|+|.... ....+|+++|+++++.++++..... ...+.
T Consensus 246 ~~~~--~SPDG~~La~~~~~------------------~g~~~I~~~d~~tg~~~~lt~~~~~------------~~~~~ 293 (429)
T PRK03629 246 GAPA--FSPDGSKLAFALSK------------------TGSLNLYVMDLASGQIRQVTDGRSN------------NTEPT 293 (429)
T ss_pred CCeE--ECCCCCEEEEEEcC------------------CCCcEEEEEECCCCCEEEccCCCCC------------cCceE
Confidence 4455 99999999998631 1123599999999988887754321 13468
Q ss_pred ccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 176 INLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 176 ~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
|+|||+.++|..... ..++||.+++++++.++++.
T Consensus 294 wSPDG~~I~f~s~~~-g~~~Iy~~d~~~g~~~~lt~ 328 (429)
T PRK03629 294 WFPDSQNLAYTSDQA-GRPQVYKVNINGGAPQRITW 328 (429)
T ss_pred ECCCCCEEEEEeCCC-CCceEEEEECCCCCeEEeec
Confidence 999999998876433 34689999998888887764
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.8e-15 Score=139.25 Aligned_cols=194 Identities=16% Similarity=0.199 Sum_probs=123.4
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC---chhHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~ 331 (494)
.|+||++||.+.+ ...|. .......+||.|+++|.+ |+|.+... ....++.++|+.+.
T Consensus 13 ~~~iv~lhG~~~~-----------~~~~~-----~~~~~l~~~~~vi~~D~~---G~G~S~~~~~~~~~~~~~~~~~~~~ 73 (257)
T TIGR03611 13 APVVVLSSGLGGS-----------GSYWA-----PQLDVLTQRFHVVTYDHR---GTGRSPGELPPGYSIAHMADDVLQL 73 (257)
T ss_pred CCEEEEEcCCCcc-----------hhHHH-----HHHHHHHhccEEEEEcCC---CCCCCCCCCcccCCHHHHHHHHHHH
Confidence 5889999996421 11121 122334578999996665 45544321 12234555666555
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCC----------------C--------
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF----------------G-------- 387 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~----------------~-------- 387 (494)
++.+ +..++.++|||+||.+++.++.++|+.++++|.+++......... .
T Consensus 74 i~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (257)
T TIGR03611 74 LDAL------NIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALF 147 (257)
T ss_pred HHHh------CCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhh
Confidence 5543 346899999999999999999999999999998877543210000 0
Q ss_pred -c----cccc-----------ccccccH-------HHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 011049 388 -F----QTEF-----------RTLWEAT-------NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALK 444 (494)
Q Consensus 388 -~----~~~~-----------~~~~~~~-------~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~ 444 (494)
+ .... ...+... ..+...+....+.++++|+|+++|++|..+| +.+++++++.+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~~ 225 (257)
T TIGR03611 148 LYPADWISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVP--YTQSLRLAAALP 225 (257)
T ss_pred hccccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccC--HHHHHHHHHhcC
Confidence 0 0000 0000000 1111223334567789999999999999988 888877777654
Q ss_pred hCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 445 GHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 445 ~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
..++.+++++||.+.. ++...+.+.+.+||+
T Consensus 226 ----~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 226 ----NAQLKLLPYGGHASNV-TDPETFNRALLDFLK 256 (257)
T ss_pred ----CceEEEECCCCCCccc-cCHHHHHHHHHHHhc
Confidence 3578889999998764 677788888888885
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.3e-15 Score=145.31 Aligned_cols=150 Identities=8% Similarity=0.010 Sum_probs=117.9
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCce-EEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLA-LVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~-i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
+.+||++|. +|..++++|.+. ....|+|||||+. ++|++..++ ..+||++++.+| +.++|+...+..
T Consensus 168 ~~~l~~~d~---dg~~~~~~~~~~-~~~~p~wSpDG~~~i~y~s~~~~-~~~Iyv~dl~tg--~~~~lt~~~g~~----- 235 (419)
T PRK04043 168 KSNIVLADY---TLTYQKVIVKGG-LNIFPKWANKEQTAFYYTSYGER-KPTLYKYNLYTG--KKEKIASSQGML----- 235 (419)
T ss_pred cceEEEECC---CCCceeEEccCC-CeEeEEECCCCCcEEEEEEccCC-CCEEEEEECCCC--cEEEEecCCCcE-----
Confidence 569999999 888899898885 6778999999996 666666544 579999999988 889998755433
Q ss_pred CCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccc
Q 011049 96 GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEED 175 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~ 175 (494)
..|. |||||++|+|.... ..+.+||++|+++++.++|+...+. +..+.
T Consensus 236 ~~~~--~SPDG~~la~~~~~------------------~g~~~Iy~~dl~~g~~~~LT~~~~~------------d~~p~ 283 (419)
T PRK04043 236 VVSD--VSKDGSKLLLTMAP------------------KGQPDIYLYDTNTKTLTQITNYPGI------------DVNGN 283 (419)
T ss_pred EeeE--ECCCCCEEEEEEcc------------------CCCcEEEEEECCCCcEEEcccCCCc------------cCccE
Confidence 2344 99999999998732 1234699999999988888765431 23458
Q ss_pred ccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 176 INLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 176 ~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
|+|||++++|+... ...++||++++++++.++++.
T Consensus 284 ~SPDG~~I~F~Sdr-~g~~~Iy~~dl~~g~~~rlt~ 318 (419)
T PRK04043 284 FVEDDKRIVFVSDR-LGYPNIFMKKLNSGSVEQVVF 318 (419)
T ss_pred ECCCCCEEEEEECC-CCCceEEEEECCCCCeEeCcc
Confidence 99999999997654 445799999999998888874
|
|
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.2e-15 Score=126.70 Aligned_cols=127 Identities=25% Similarity=0.237 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHh
Q 011049 325 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIE 404 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (494)
...+.+.++.+.++..+|.+|+.+.|+|.|+.+++.++.++|+.|+++|+++|..-....
T Consensus 80 ~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~-------------------- 139 (207)
T COG0400 80 TEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE-------------------- 139 (207)
T ss_pred HHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc--------------------
Confidence 455666777777777789999999999999999999999999999999999996432110
Q ss_pred cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 405 MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 405 ~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
.....-.+|+|++||+.|++|| ...+.++.+.|++.|.+++...++ .||.+.. ..++.+.+|+.+.+
T Consensus 140 ----~~~~~~~~pill~hG~~Dpvvp--~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~~-----e~~~~~~~wl~~~~ 206 (207)
T COG0400 140 ----LLPDLAGTPILLSHGTEDPVVP--LALAEALAEYLTASGADVEVRWHE-GGHEIPP-----EELEAARSWLANTL 206 (207)
T ss_pred ----cccccCCCeEEEeccCcCCccC--HHHHHHHHHHHHHcCCCEEEEEec-CCCcCCH-----HHHHHHHHHHHhcc
Confidence 0111235899999999999998 999999999999999999999999 7998863 55667777887654
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.7e-15 Score=144.71 Aligned_cols=154 Identities=11% Similarity=0.115 Sum_probs=111.6
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCce--EEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLA--LVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~--i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
++.+||++|. +|+++++||........|+|||||+. |+|++.+++ ..+||++++++| +.++|+...+..
T Consensus 163 ~~~~l~~~d~---dG~~~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g-~~~I~~~~l~~g--~~~~lt~~~g~~--- 233 (428)
T PRK01029 163 KQGELWSVDY---DGQNLRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLG-VPKIFLGSLENP--AGKKILALQGNQ--- 233 (428)
T ss_pred ccceEEEEcC---CCCCceEcccCCCCcccceEccCCCceEEEEEEccCC-CceEEEEECCCC--CceEeecCCCCc---
Confidence 3679999999 99999999998877889999999987 667887776 689999999988 889999877665
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEe--eecCC---CceEEEEeeCcchhhhheeeec
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDL--FDINT---GSKERIWESNREKYFETAVALV 168 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~--~d~~~---g~~~~l~~~~~~~~~~~~~~~~ 168 (494)
..|. |||||++|+|.+.. +| ...+++ +++.+ ++.++++.....
T Consensus 234 --~~p~--wSPDG~~Laf~s~~------------~g------~~di~~~~~~~~~g~~g~~~~lt~~~~~---------- 281 (428)
T PRK01029 234 --LMPT--FSPRKKLLAFISDR------------YG------NPDLFIQSFSLETGAIGKPRRLLNEAFG---------- 281 (428)
T ss_pred --cceE--ECCCCCEEEEEECC------------CC------CcceeEEEeecccCCCCcceEeecCCCC----------
Confidence 3455 99999999998732 11 112444 35543 345566543211
Q ss_pred cCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC--CceeEeecC
Q 011049 169 FGQGEEDINLNQLKILTSKESKTEITQYHILSWPL--KKSSQITNF 212 (494)
Q Consensus 169 s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~--~~~~~lt~~ 212 (494)
....+.|||||+.++|.... ...+++|++++++ +..++++..
T Consensus 282 -~~~~p~wSPDG~~Laf~s~~-~g~~~ly~~~~~~~g~~~~~lt~~ 325 (428)
T PRK01029 282 -TQGNPSFSPDGTRLVFVSNK-DGRPRIYIMQIDPEGQSPRLLTKK 325 (428)
T ss_pred -CcCCeEECCCCCEEEEEECC-CCCceEEEEECcccccceEEeccC
Confidence 12346899999999987643 2345799988753 445666643
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.5e-15 Score=144.64 Aligned_cols=237 Identities=12% Similarity=0.083 Sum_probs=145.2
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEe
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 302 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 302 (494)
..++..+++.||..+....+.+..... ....|+||++||.+. +.. ..+.......+.++||.|++
T Consensus 70 ~~~re~l~~~DG~~~~ldw~~~~~~~~--~~~~p~vvllHG~~g-----------~s~--~~y~~~~~~~~~~~g~~vv~ 134 (388)
T PLN02511 70 RYRRECLRTPDGGAVALDWVSGDDRAL--PADAPVLILLPGLTG-----------GSD--DSYVRHMLLRARSKGWRVVV 134 (388)
T ss_pred ceeEEEEECCCCCEEEEEecCcccccC--CCCCCEEEEECCCCC-----------CCC--CHHHHHHHHHHHHCCCEEEE
Confidence 345556777899888765554322111 122689999999641 111 11111233456789999999
Q ss_pred CCCCCCCCCCCCCC--CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCc--eeEEEeCCCC
Q 011049 303 GPSIPIIGEGDKLP--NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL--FCCGIARSGS 378 (494)
Q Consensus 303 ~~~~~~~g~g~~~~--~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~--~~a~v~~~~~ 378 (494)
+|.+| +|.+.. ...+.....+|+.++++++..+. ...++.++|+|+||.+++.++.++|+. +++++++++.
T Consensus 135 ~d~rG---~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p 209 (388)
T PLN02511 135 FNSRG---CADSPVTTPQFYSASFTGDLRQVVDHVAGRY--PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNP 209 (388)
T ss_pred EecCC---CCCCCCCCcCEEcCCchHHHHHHHHHHHHHC--CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCC
Confidence 77664 444422 12223345789999999998763 235899999999999999999999886 7777776655
Q ss_pred CCCCC------CCCC------cc---------cc---------c--------cc-------------ccccH-HHHHhcC
Q 011049 379 YNKTL------TPFG------FQ---------TE---------F--------RT-------------LWEAT-NVYIEMS 406 (494)
Q Consensus 379 ~~~~~------~~~~------~~---------~~---------~--------~~-------------~~~~~-~~~~~~s 406 (494)
.+... ..+. +. .. . .. .+... +.|...|
T Consensus 210 ~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s 289 (388)
T PLN02511 210 FDLVIADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSS 289 (388)
T ss_pred cCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcC
Confidence 43100 0000 00 00 0 00 00111 2234556
Q ss_pred ccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHH------HHHHHHHHHHH
Q 011049 407 PITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVM------HVIWETDRWLQ 480 (494)
Q Consensus 407 p~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~------~~~~~~~~fl~ 480 (494)
+...+.++++|+|+++|++|+.+| ..... ..+.+....+++++++++||.... +... -..+.+.+||+
T Consensus 290 ~~~~L~~I~vPtLiI~g~dDpi~p--~~~~~---~~~~~~~p~~~l~~~~~gGH~~~~-E~p~~~~~~~w~~~~i~~Fl~ 363 (388)
T PLN02511 290 SSDSIKHVRVPLLCIQAANDPIAP--ARGIP---REDIKANPNCLLIVTPSGGHLGWV-AGPEAPFGAPWTDPVVMEFLE 363 (388)
T ss_pred chhhhccCCCCeEEEEcCCCCcCC--cccCc---HhHHhcCCCEEEEECCCcceeccc-cCCCCCCCCccHHHHHHHHHH
Confidence 777888999999999999999987 44321 112233456899999999997543 2221 13567888988
Q ss_pred HhcCC
Q 011049 481 KYCLS 485 (494)
Q Consensus 481 ~~l~~ 485 (494)
.....
T Consensus 364 ~~~~~ 368 (388)
T PLN02511 364 ALEEG 368 (388)
T ss_pred HHHHh
Confidence 77643
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=8.2e-15 Score=145.08 Aligned_cols=151 Identities=10% Similarity=0.107 Sum_probs=119.4
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
+.+||++|. +|..++++|........|+|||||+.|+|.+..++ ..+||++++.++ +.++++...+.. .
T Consensus 181 ~~~l~~~d~---dg~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g-~~~i~~~dl~~g--~~~~l~~~~g~~-----~ 249 (435)
T PRK05137 181 IKRLAIMDQ---DGANVRYLTDGSSLVLTPRFSPNRQEITYMSYANG-RPRVYLLDLETG--QRELVGNFPGMT-----F 249 (435)
T ss_pred ceEEEEECC---CCCCcEEEecCCCCeEeeEECCCCCEEEEEEecCC-CCEEEEEECCCC--cEEEeecCCCcc-----c
Confidence 558999999 89999999988877889999999999999987665 689999999987 778888665543 3
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.|. |||||++|+|.... ....+||++|+++++.++++...+. ...+.|
T Consensus 250 ~~~--~SPDG~~la~~~~~------------------~g~~~Iy~~d~~~~~~~~Lt~~~~~------------~~~~~~ 297 (435)
T PRK05137 250 APR--FSPDGRKVVMSLSQ------------------GGNTDIYTMDLRSGTTTRLTDSPAI------------DTSPSY 297 (435)
T ss_pred CcE--ECCCCCEEEEEEec------------------CCCceEEEEECCCCceEEccCCCCc------------cCceeE
Confidence 445 99999999998632 1234699999999988887764432 124589
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
+|||++++|.... ...++||++++++++.++++.
T Consensus 298 spDG~~i~f~s~~-~g~~~Iy~~d~~g~~~~~lt~ 331 (435)
T PRK05137 298 SPDGSQIVFESDR-SGSPQLYVMNADGSNPRRISF 331 (435)
T ss_pred cCCCCEEEEEECC-CCCCeEEEEECCCCCeEEeec
Confidence 9999999987543 334689999998888888875
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.8e-15 Score=144.21 Aligned_cols=151 Identities=15% Similarity=0.135 Sum_probs=118.1
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
..+||++|. +|..++++|..+.....|+|||||++|+|++..++ ..+||+++++++ +.++++...+.. .
T Consensus 197 ~~~l~i~d~---dG~~~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g-~~~L~~~dl~tg--~~~~lt~~~g~~-----~ 265 (448)
T PRK04792 197 PYQLMIADY---DGYNEQMLLRSPEPLMSPAWSPDGRKLAYVSFENR-KAEIFVQDIYTQ--VREKVTSFPGIN-----G 265 (448)
T ss_pred ceEEEEEeC---CCCCceEeecCCCcccCceECCCCCEEEEEEecCC-CcEEEEEECCCC--CeEEecCCCCCc-----C
Confidence 348999998 88889999999888889999999999999987655 679999999987 778887665433 3
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.|. |||||++|+|.... ....+||++|+++++.++++..... ...+.|
T Consensus 266 ~~~--wSPDG~~La~~~~~------------------~g~~~Iy~~dl~tg~~~~lt~~~~~------------~~~p~w 313 (448)
T PRK04792 266 APR--FSPDGKKLALVLSK------------------DGQPEIYVVDIATKALTRITRHRAI------------DTEPSW 313 (448)
T ss_pred Cee--ECCCCCEEEEEEeC------------------CCCeEEEEEECCCCCeEECccCCCC------------ccceEE
Confidence 444 99999999997632 1234699999999988877654321 134589
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
+|||+.++++... ...+++|++++++++.++++.
T Consensus 314 SpDG~~I~f~s~~-~g~~~Iy~~dl~~g~~~~Lt~ 347 (448)
T PRK04792 314 HPDGKSLIFTSER-GGKPQIYRVNLASGKVSRLTF 347 (448)
T ss_pred CCCCCEEEEEECC-CCCceEEEEECCCCCEEEEec
Confidence 9999999887643 334689999999888888863
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.65 E-value=3e-15 Score=124.93 Aligned_cols=145 Identities=26% Similarity=0.329 Sum_probs=104.6
Q ss_pred EEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 011049 257 CLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVV 336 (494)
Q Consensus 257 ~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~ 336 (494)
+||++||.+. +...+ ...+..|+++||.|+.++++ +.+.. ....++..+++++.
T Consensus 1 ~vv~~HG~~~-----------~~~~~----~~~~~~l~~~G~~v~~~~~~---~~~~~--------~~~~~~~~~~~~~~ 54 (145)
T PF12695_consen 1 VVVLLHGWGG-----------SRRDY----QPLAEALAEQGYAVVAFDYP---GHGDS--------DGADAVERVLADIR 54 (145)
T ss_dssp EEEEECTTTT-----------TTHHH----HHHHHHHHHTTEEEEEESCT---TSTTS--------HHSHHHHHHHHHHH
T ss_pred CEEEECCCCC-----------CHHHH----HHHHHHHHHCCCEEEEEecC---CCCcc--------chhHHHHHHHHHHH
Confidence 5899999752 11112 24566889999999996654 33332 11224445555543
Q ss_pred HcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCC
Q 011049 337 RRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKK 416 (494)
Q Consensus 337 ~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~ 416 (494)
+.. .|+++|+++|||+||.+++.++... ..++++|+++|..+ ...+.+.+.
T Consensus 55 ~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~---------------------------~~~~~~~~~ 105 (145)
T PF12695_consen 55 AGY-PDPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSPYPD---------------------------SEDLAKIRI 105 (145)
T ss_dssp HHH-CTCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESESSG---------------------------CHHHTTTTS
T ss_pred hhc-CCCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecCccc---------------------------hhhhhccCC
Confidence 322 2889999999999999999999998 78999999988200 112345678
Q ss_pred CEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCc
Q 011049 417 PILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV 461 (494)
Q Consensus 417 P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 461 (494)
|+|+++|++|..++ ..+.++++++++ .+.+++++++++|+
T Consensus 106 pv~~i~g~~D~~~~--~~~~~~~~~~~~---~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 106 PVLFIHGENDPLVP--PEQVRRLYEALP---GPKELYIIPGAGHF 145 (145)
T ss_dssp EEEEEEETT-SSSH--HHHHHHHHHHHC---SSEEEEEETTS-TT
T ss_pred cEEEEEECCCCcCC--HHHHHHHHHHcC---CCcEEEEeCCCcCc
Confidence 99999999999997 888888888887 56899999999995
|
... |
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.4e-15 Score=138.89 Aligned_cols=198 Identities=13% Similarity=0.074 Sum_probs=123.0
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCc---hhHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~ 331 (494)
.|.||++||.+.+. ..|..+. .....+++.||.|+++|.+ |+|.+.... .......+|+.++
T Consensus 30 ~~~ivllHG~~~~~-----------~~~~~~~-~~~~~l~~~~~~vi~~D~~---G~G~S~~~~~~~~~~~~~~~~l~~~ 94 (282)
T TIGR03343 30 GEAVIMLHGGGPGA-----------GGWSNYY-RNIGPFVDAGYRVILKDSP---GFNKSDAVVMDEQRGLVNARAVKGL 94 (282)
T ss_pred CCeEEEECCCCCch-----------hhHHHHH-HHHHHHHhCCCEEEEECCC---CCCCCCCCcCcccccchhHHHHHHH
Confidence 46799999964211 1122111 1233566789999996654 556554321 1111234555554
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCC--CCCCC----------------------
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT--LTPFG---------------------- 387 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~--~~~~~---------------------- 387 (494)
++.+ +.+++.++|||+||.+++.++.++|++++++|++++..... .....
T Consensus 95 l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (282)
T TIGR03343 95 MDAL------DIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQM 168 (282)
T ss_pred HHHc------CCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHH
Confidence 4443 45789999999999999999999999999999987642110 00000
Q ss_pred -----ccccc------ccccc----cHH---HHHh---------cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHH
Q 011049 388 -----FQTEF------RTLWE----ATN---VYIE---------MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFF 440 (494)
Q Consensus 388 -----~~~~~------~~~~~----~~~---~~~~---------~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~ 440 (494)
+.... ...|. .+. .+.. .+....+.++++|+|+++|++|..++ +..+.++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~--~~~~~~~~ 246 (282)
T TIGR03343 169 LNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVP--LDHGLKLL 246 (282)
T ss_pred HhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCC--chhHHHHH
Confidence 00000 00000 000 0100 01122356789999999999999997 77777777
Q ss_pred HHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 441 DALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 441 ~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
+.+. ++++++++++||... .+....+.+.+.+||.
T Consensus 247 ~~~~----~~~~~~i~~agH~~~-~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 247 WNMP----DAQLHVFSRCGHWAQ-WEHADAFNRLVIDFLR 281 (282)
T ss_pred HhCC----CCEEEEeCCCCcCCc-ccCHHHHHHHHHHHhh
Confidence 6664 478899999999976 4777788888999985
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.9e-14 Score=136.78 Aligned_cols=233 Identities=18% Similarity=0.091 Sum_probs=138.0
Q ss_pred EEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCC
Q 011049 226 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPS 305 (494)
Q Consensus 226 ~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~ 305 (494)
.-.++..||..+.......+. . +.+.|+||++||.+. +. ...+....+..|+++||.|+..|.
T Consensus 33 ~~~~~~~dg~~~~l~w~~~~~-~---~~~~p~vll~HG~~g-----------~~--~~~~~~~~~~~l~~~G~~v~~~d~ 95 (324)
T PRK10985 33 WQRLELPDGDFVDLAWSEDPA-Q---ARHKPRLVLFHGLEG-----------SF--NSPYAHGLLEAAQKRGWLGVVMHF 95 (324)
T ss_pred eeEEECCCCCEEEEecCCCCc-c---CCCCCEEEEeCCCCC-----------CC--cCHHHHHHHHHHHHCCCEEEEEeC
Confidence 334566788766554322111 1 223699999999531 11 111112345578899999999777
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCc--eeEEEeCCCCCCCCC
Q 011049 306 IPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL--FCCGIARSGSYNKTL 383 (494)
Q Consensus 306 ~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~--~~a~v~~~~~~~~~~ 383 (494)
+|..+..... ...+.....+|+..+++++.++. ...++.++|||+||.+++.+++.+++. ++++|++++..+...
T Consensus 96 rG~g~~~~~~-~~~~~~~~~~D~~~~i~~l~~~~--~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~ 172 (324)
T PRK10985 96 RGCSGEPNRL-HRIYHSGETEDARFFLRWLQREF--GHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEA 172 (324)
T ss_pred CCCCCCccCC-cceECCCchHHHHHHHHHHHHhC--CCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHH
Confidence 6543221111 11111234688889999998763 236799999999999888887776543 788888877654110
Q ss_pred C-----C-------C------------------C---ccccc----c----------c---cc-ccHHHHHhcCcccccc
Q 011049 384 T-----P-------F------------------G---FQTEF----R----------T---LW-EATNVYIEMSPITHAN 412 (494)
Q Consensus 384 ~-----~-------~------------------~---~~~~~----~----------~---~~-~~~~~~~~~sp~~~~~ 412 (494)
. . . . ...+. . . .+ ...+.|...++...+.
T Consensus 173 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~ 252 (324)
T PRK10985 173 CSYRMEQGFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLN 252 (324)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHh
Confidence 0 0 0 0 00000 0 0 00 1123344556666778
Q ss_pred CCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcc---cHHHHH-HHHHHHHHHhcC
Q 011049 413 KIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE---NVMHVI-WETDRWLQKYCL 484 (494)
Q Consensus 413 ~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~---~~~~~~-~~~~~fl~~~l~ 484 (494)
++++|+|+++|++|+.++ ......+ .+....+++.+++++||...... ....+. +.+.+||+..+.
T Consensus 253 ~i~~P~lii~g~~D~~~~--~~~~~~~----~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~~ 322 (324)
T PRK10985 253 QIRKPTLIIHAKDDPFMT--HEVIPKP----ESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYLE 322 (324)
T ss_pred CCCCCEEEEecCCCCCCC--hhhChHH----HHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhhc
Confidence 899999999999999986 5544333 23334578899999999743221 112333 457889877653
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.7e-14 Score=134.55 Aligned_cols=212 Identities=19% Similarity=0.149 Sum_probs=127.1
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 308 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 308 (494)
+...+|.++.+...-++ + .|+||++||.+. +...|. ..... ++++|.|+.+|.+
T Consensus 10 ~~~~~~~~~~~~~~g~~------~--~~~vv~~hG~~~-----------~~~~~~----~~~~~-l~~~~~vi~~D~~-- 63 (278)
T TIGR03056 10 RVTVGPFHWHVQDMGPT------A--GPLLLLLHGTGA-----------STHSWR----DLMPP-LARSFRVVAPDLP-- 63 (278)
T ss_pred eeeECCEEEEEEecCCC------C--CCeEEEEcCCCC-----------CHHHHH----HHHHH-HhhCcEEEeecCC--
Confidence 33346766654433221 1 478999999642 111121 12223 4567999996654
Q ss_pred CCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC-
Q 011049 309 IGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT- 384 (494)
Q Consensus 309 ~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~- 384 (494)
|+|.+... ....+..++|+.++++.+ + .+++.++|||+||.+++.++.++|++++++|++++.......
T Consensus 64 -G~G~S~~~~~~~~~~~~~~~~l~~~i~~~---~---~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~ 136 (278)
T TIGR03056 64 -GHGFTRAPFRFRFTLPSMAEDLSALCAAE---G---LSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGM 136 (278)
T ss_pred -CCCCCCCccccCCCHHHHHHHHHHHHHHc---C---CCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccc
Confidence 56655322 123455566665554432 2 357899999999999999999999989988887764321100
Q ss_pred -----CC--------Ccc---------ccc---------ccccc--cHHHHH-----------------hc---Cccccc
Q 011049 385 -----PF--------GFQ---------TEF---------RTLWE--ATNVYI-----------------EM---SPITHA 411 (494)
Q Consensus 385 -----~~--------~~~---------~~~---------~~~~~--~~~~~~-----------------~~---sp~~~~ 411 (494)
+. .+. ... ...+. ....+. .. .....+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (278)
T TIGR03056 137 AGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDL 216 (278)
T ss_pred cccccchhhHhhhhcccchHHHHhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhc
Confidence 00 000 000 00000 000000 00 011235
Q ss_pred cCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 412 NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 412 ~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
.++++|+|+++|++|..+| ...++++.+.+. .+++.+++++||.+.. +....+.+.+.+||+
T Consensus 217 ~~i~~P~lii~g~~D~~vp--~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 217 PRITIPLHLIAGEEDKAVP--PDESKRAATRVP----TATLHVVPGGGHLVHE-EQADGVVGLILQAAE 278 (278)
T ss_pred ccCCCCEEEEEeCCCcccC--HHHHHHHHHhcc----CCeEEEECCCCCcccc-cCHHHHHHHHHHHhC
Confidence 6688999999999999997 777767665553 3578999999998764 667788888888873
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.3e-14 Score=139.93 Aligned_cols=149 Identities=15% Similarity=0.102 Sum_probs=119.1
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
.+||++++ +.++..++.........|+|||||++|+|...+++ +.+||++|++++ +.++||+..+.+ .+
T Consensus 218 ~~i~~~~l---~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rdg-~~~iy~~dl~~~--~~~~Lt~~~gi~-----~~ 286 (425)
T COG0823 218 PRIYYLDL---NTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRDG-SPDIYLMDLDGK--NLPRLTNGFGIN-----TS 286 (425)
T ss_pred ceEEEEec---cCCccceeeccCCccCCccCCCCCCEEEEEECCCC-CccEEEEcCCCC--cceecccCCccc-----cC
Confidence 68999999 77887887777788889999999999999999887 899999999998 677799888877 57
Q ss_pred CceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccccc
Q 011049 98 PMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDIN 177 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s 177 (494)
|. |||||++|+|.+. ...+++|++++++++..++++...+. ...+.||
T Consensus 287 Ps--~spdG~~ivf~Sd------------------r~G~p~I~~~~~~g~~~~riT~~~~~------------~~~p~~S 334 (425)
T COG0823 287 PS--WSPDGSKIVFTSD------------------RGGRPQIYLYDLEGSQVTRLTFSGGG------------NSNPVWS 334 (425)
T ss_pred cc--CCCCCCEEEEEeC------------------CCCCcceEEECCCCCceeEeeccCCC------------CcCccCC
Confidence 77 9999999999973 23456799999999999888876543 1145899
Q ss_pred ccCcEEEEEEecCCCCCeEEEEEcCCCc-eeEee
Q 011049 178 LNQLKILTSKESKTEITQYHILSWPLKK-SSQIT 210 (494)
Q Consensus 178 ~d~~~~~~~~~s~~~p~~l~~~~~~~~~-~~~lt 210 (494)
|||+++++....... ..+...++.++. .+.++
T Consensus 335 pdG~~i~~~~~~~g~-~~i~~~~~~~~~~~~~lt 367 (425)
T COG0823 335 PDGDKIVFESSSGGQ-WDIDKNDLASGGKIRILT 367 (425)
T ss_pred CCCCEEEEEeccCCc-eeeEEeccCCCCcEEEcc
Confidence 999999998744222 456777665554 55554
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.8e-14 Score=139.63 Aligned_cols=151 Identities=12% Similarity=0.111 Sum_probs=115.9
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
+.+||++|. +|..+++++........|+|||||+.|+|.+..++ ..+||+.++.++ +.++++...+.. .
T Consensus 175 ~~~L~~~D~---dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~-~~~I~~~dl~~g--~~~~l~~~~g~~-----~ 243 (427)
T PRK02889 175 RYQLQISDA---DGQNAQSALSSPEPIISPAWSPDGTKLAYVSFESK-KPVVYVHDLATG--RRRVVANFKGSN-----S 243 (427)
T ss_pred ccEEEEECC---CCCCceEeccCCCCcccceEcCCCCEEEEEEccCC-CcEEEEEECCCC--CEEEeecCCCCc-----c
Confidence 458999998 88888999888777889999999999999987654 678999999987 777887655433 3
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.|. |||||++|+|.... ....+||++|+++++.++++...+. ...+.|
T Consensus 244 ~~~--~SPDG~~la~~~~~------------------~g~~~Iy~~d~~~~~~~~lt~~~~~------------~~~~~w 291 (427)
T PRK02889 244 APA--WSPDGRTLAVALSR------------------DGNSQIYTVNADGSGLRRLTQSSGI------------DTEPFF 291 (427)
T ss_pred ceE--ECCCCCEEEEEEcc------------------CCCceEEEEECCCCCcEECCCCCCC------------CcCeEE
Confidence 455 99999999997631 1234699999998887777654321 124589
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
+|||+++++... ....+++|.++.++++.++++.
T Consensus 292 SpDG~~l~f~s~-~~g~~~Iy~~~~~~g~~~~lt~ 325 (427)
T PRK02889 292 SPDGRSIYFTSD-RGGAPQIYRMPASGGAAQRVTF 325 (427)
T ss_pred cCCCCEEEEEec-CCCCcEEEEEECCCCceEEEec
Confidence 999999988643 3334689999988887777763
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.5e-14 Score=136.57 Aligned_cols=225 Identities=16% Similarity=0.125 Sum_probs=132.7
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEe
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 302 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 302 (494)
....+++...+|..+..... ..+ .+ ..|.||++||.+.. ...| ......|.++||.|++
T Consensus 20 ~~~~~~~~~~~~~~~~i~y~-~~G-~~----~~~~lvliHG~~~~-----------~~~w----~~~~~~L~~~gy~vi~ 78 (302)
T PRK00870 20 APHYVDVDDGDGGPLRMHYV-DEG-PA----DGPPVLLLHGEPSW-----------SYLY----RKMIPILAAAGHRVIA 78 (302)
T ss_pred CceeEeecCCCCceEEEEEE-ecC-CC----CCCEEEEECCCCCc-----------hhhH----HHHHHHHHhCCCEEEE
Confidence 34556666556654443322 222 11 14689999996421 1112 1234456678999999
Q ss_pred CCCCCCCCCCCCCCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC
Q 011049 303 GPSIPIIGEGDKLPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 303 ~~~~~~~g~g~~~~~~----~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 378 (494)
+|. +|+|.+.... ...+..++|+.+.++.+ +.+++.++|||+||.++..++..+|++++++|.+++.
T Consensus 79 ~Dl---~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 149 (302)
T PRK00870 79 PDL---IGFGRSDKPTRREDYTYARHVEWMRSWFEQL------DLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTG 149 (302)
T ss_pred ECC---CCCCCCCCCCCcccCCHHHHHHHHHHHHHHc------CCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCC
Confidence 555 4566653321 12345556655554433 2367999999999999999999999999999988753
Q ss_pred CCCCCC--C-----CC-c--c-------c---cccccc---ccHHHHH----------------h---cCc---------
Q 011049 379 YNKTLT--P-----FG-F--Q-------T---EFRTLW---EATNVYI----------------E---MSP--------- 407 (494)
Q Consensus 379 ~~~~~~--~-----~~-~--~-------~---~~~~~~---~~~~~~~----------------~---~sp--------- 407 (494)
...... . +. + . . .....+ +....|. . ..+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (302)
T PRK00870 150 LPTGDGPMPDAFWAWRAFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANR 229 (302)
T ss_pred CCCccccchHHHhhhhcccccCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHH
Confidence 210000 0 00 0 0 0 000000 0000010 0 000
Q ss_pred --cccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 408 --ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 408 --~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
...+.++++|+|+++|++|+.+| ... .++.+.+... ..+++.++++++|... .+..+.+...+.+||.++
T Consensus 230 ~~~~~l~~i~~P~lii~G~~D~~~~--~~~-~~~~~~~~~~-~~~~~~~i~~~gH~~~-~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 230 AAWAVLERWDKPFLTAFSDSDPITG--GGD-AILQKRIPGA-AGQPHPTIKGAGHFLQ-EDSGEELAEAVLEFIRAT 301 (302)
T ss_pred HHHHhhhcCCCceEEEecCCCCccc--Cch-HHHHhhcccc-cccceeeecCCCccch-hhChHHHHHHHHHHHhcC
Confidence 02346788999999999999987 544 6666655532 1134778999999976 467788888999999765
|
|
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.2e-14 Score=131.71 Aligned_cols=208 Identities=17% Similarity=0.156 Sum_probs=130.8
Q ss_pred ceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCC
Q 011049 235 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK 314 (494)
Q Consensus 235 ~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~ 314 (494)
..+++.+++|.. .+++|+||++||.+... . ........|+++||.|++++.++..+.+
T Consensus 37 ~~~p~~v~~P~~-----~g~~PvVv~lHG~~~~~-----------~----~y~~l~~~Las~G~~VvapD~~g~~~~~-- 94 (313)
T PLN00021 37 PPKPLLVATPSE-----AGTYPVLLFLHGYLLYN-----------S----FYSQLLQHIASHGFIVVAPQLYTLAGPD-- 94 (313)
T ss_pred CCceEEEEeCCC-----CCCCCEEEEECCCCCCc-----------c----cHHHHHHHHHhCCCEEEEecCCCcCCCC--
Confidence 468999999975 24489999999975211 1 1123455788999999997765532111
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHc--------CCCCCCcEEEEecChHHHHHHHHHHhCCC-----ceeEEEeCCCCCCC
Q 011049 315 LPNDRFVEQLVSSAEAAVEEVVRR--------GVADPSRIAVGGHSYGAFMTAHLLAHAPH-----LFCCGIARSGSYNK 381 (494)
Q Consensus 315 ~~~~~~~~~~~~d~~~~v~~l~~~--------~~~d~~ri~i~G~S~GG~~a~~~~~~~p~-----~~~a~v~~~~~~~~ 381 (494)
. ....+|..++++|+.+. ..+|.++++++|||+||++++.++..+++ +|+++|++.|+...
T Consensus 95 ---~---~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 95 ---G---TDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGT 168 (313)
T ss_pred ---c---hhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccccc
Confidence 1 12234556666776642 23677899999999999999999998874 58899988887542
Q ss_pred CCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCC-----C----CCCCHHHHHHHHHHHHhCCCcEEE
Q 011049 382 TLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDD-----K----VGLFPMQAERFFDALKGHGALSRL 452 (494)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~-----~----v~~~~~~~~~~~~~l~~~g~~~~~ 452 (494)
.... .. .+..+ ...+ ..-++.+|+|++++..|. . .| +..+..++++..+ .+..+
T Consensus 169 ~~~~------~~----~p~il-~~~~--~s~~~~~P~liig~g~~~~~~~~~~p~~ap-~~~~~~~f~~~~~---~~~~~ 231 (313)
T PLN00021 169 SKGK------QT----PPPVL-TYAP--HSFNLDIPVLVIGTGLGGEPRNPLFPPCAP-DGVNHAEFFNECK---APAVH 231 (313)
T ss_pred cccc------CC----CCccc-ccCc--ccccCCCCeEEEecCCCcccccccccccCC-CCCCHHHHHHhcC---CCeee
Confidence 1100 00 00000 0011 122367999999999764 1 22 1223356776654 35788
Q ss_pred EEcCCCCCccCCcc----------------------cHHHHHHHHHHHHHHhcCCCC
Q 011049 453 VLLPFEHHVYAARE----------------------NVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 453 ~~~~~~~H~~~~~~----------------------~~~~~~~~~~~fl~~~l~~~~ 487 (494)
++.++.+|.-...+ .+......++.||..+|.+..
T Consensus 232 ~~~~~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~~~ 288 (313)
T PLN00021 232 FVAKDYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEGDT 288 (313)
T ss_pred eeecCCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhcCch
Confidence 88899999632111 112344578899999998754
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=8.6e-14 Score=134.43 Aligned_cols=207 Identities=14% Similarity=0.071 Sum_probs=129.7
Q ss_pred ccEEEEEEcC-CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCC----
Q 011049 223 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR---- 297 (494)
Q Consensus 223 ~~~~~~~~~~-dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G---- 297 (494)
..+.+++.+. -|.+..+++|+|+++. .+ ++|+|+++||..|... . ........|.++|
T Consensus 179 ~~~~~~~~S~~Lg~~r~v~VY~P~~y~-~~--~~PvlyllDG~~w~~~------------~--~~~~~ld~li~~g~i~P 241 (411)
T PRK10439 179 PAKEIIWKSERLGNSRRVWIYTTGDAA-PE--ERPLAILLDGQFWAES------------M--PVWPALDSLTHRGQLPP 241 (411)
T ss_pred ceEEEEEEccccCCceEEEEEECCCCC-CC--CCCEEEEEECHHhhhc------------C--CHHHHHHHHHHcCCCCc
Confidence 3566677654 5678999999999886 22 4999999999653210 0 0112233556667
Q ss_pred eEEEeCCCCCCCCCCCCC-CCchhHHHHHHHHHHHHHHHHHcC--CCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEe
Q 011049 298 FAVLAGPSIPIIGEGDKL-PNDRFVEQLVSSAEAAVEEVVRRG--VADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIA 374 (494)
Q Consensus 298 ~~v~~~~~~~~~g~g~~~-~~~~~~~~~~~d~~~~v~~l~~~~--~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~ 374 (494)
.+++.++..+...+..+. ....+...+.+++... +.++. ..|+++.+|+|+||||+.|++++.++|++|.++++
T Consensus 242 ~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~---I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s 318 (411)
T PRK10439 242 AVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQ---VRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLS 318 (411)
T ss_pred eEEEEECCCCcccccccCCchHHHHHHHHHHHHHH---HHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEE
Confidence 334554443221121111 2233444445555444 44432 25788999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEE
Q 011049 375 RSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVL 454 (494)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~ 454 (494)
++|.+-+... ......| ..+.+... .....+..++|-+|+.|..+ ...++++.+.|+++|.++++.+
T Consensus 319 ~Sgs~ww~~~-----~~~~~~~-l~~~l~~~----~~~~~~lr~~i~~G~~E~~~---~~~~~~l~~~L~~~G~~~~~~~ 385 (411)
T PRK10439 319 QSGSFWWPHR-----GGQQEGV-LLEQLKAG----EVSARGLRIVLEAGRREPMI---MRANQALYAQLHPAGHSVFWRQ 385 (411)
T ss_pred eccceecCCc-----cCCchhH-HHHHHHhc----ccCCCCceEEEeCCCCCchH---HHHHHHHHHHHHHCCCcEEEEE
Confidence 9986421110 0000000 01111110 01112346889999999654 6778999999999999999999
Q ss_pred cCCCCCccC
Q 011049 455 LPFEHHVYA 463 (494)
Q Consensus 455 ~~~~~H~~~ 463 (494)
++| ||.+.
T Consensus 386 ~~G-GHd~~ 393 (411)
T PRK10439 386 VDG-GHDAL 393 (411)
T ss_pred CCC-CcCHH
Confidence 998 79653
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.6e-14 Score=138.84 Aligned_cols=151 Identities=12% Similarity=0.076 Sum_probs=115.4
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
+.+||++|+ .++++++++..+.....|+|||||+.|+|+...++ ..+||+++++++ +.++++.....+ .
T Consensus 241 ~~~L~~~dl---~tg~~~~lt~~~g~~~~~~wSPDG~~La~~~~~~g-~~~Iy~~dl~tg--~~~~lt~~~~~~-----~ 309 (448)
T PRK04792 241 KAEIFVQDI---YTQVREKVTSFPGINGAPRFSPDGKKLALVLSKDG-QPEIYVVDIATK--ALTRITRHRAID-----T 309 (448)
T ss_pred CcEEEEEEC---CCCCeEEecCCCCCcCCeeECCCCCEEEEEEeCCC-CeEEEEEECCCC--CeEECccCCCCc-----c
Confidence 347999999 88888889887766678999999999999887666 689999999987 778888754332 4
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.|. |||||++|+|.+.. ...++||++|+++|+.++++..... ...+.|
T Consensus 310 ~p~--wSpDG~~I~f~s~~------------------~g~~~Iy~~dl~~g~~~~Lt~~g~~------------~~~~~~ 357 (448)
T PRK04792 310 EPS--WHPDGKSLIFTSER------------------GGKPQIYRVNLASGKVSRLTFEGEQ------------NLGGSI 357 (448)
T ss_pred ceE--ECCCCCEEEEEECC------------------CCCceEEEEECCCCCEEEEecCCCC------------CcCeeE
Confidence 455 99999999998631 1234799999999988887642211 113489
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
+|||+.+++.... .....||++++++++.+.++.
T Consensus 358 SpDG~~l~~~~~~-~g~~~I~~~dl~~g~~~~lt~ 391 (448)
T PRK04792 358 TPDGRSMIMVNRT-NGKFNIARQDLETGAMQVLTS 391 (448)
T ss_pred CCCCCEEEEEEec-CCceEEEEEECCCCCeEEccC
Confidence 9999998886543 234579999999888877764
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.9e-13 Score=122.64 Aligned_cols=200 Identities=17% Similarity=0.171 Sum_probs=130.3
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCch----hHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDR----FVEQLVSSAEA 330 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~----~~~~~~~d~~~ 330 (494)
-|+|+++||-|. .|..+ +.....|+++||.|+++| .+|+|.+..... .....+.|+..
T Consensus 44 gP~illlHGfPe--------------~wysw-r~q~~~la~~~~rviA~D---lrGyG~Sd~P~~~~~Yt~~~l~~di~~ 105 (322)
T KOG4178|consen 44 GPIVLLLHGFPE--------------SWYSW-RHQIPGLASRGYRVIAPD---LRGYGFSDAPPHISEYTIDELVGDIVA 105 (322)
T ss_pred CCEEEEEccCCc--------------cchhh-hhhhhhhhhcceEEEecC---CCCCCCCCCCCCcceeeHHHHHHHHHH
Confidence 699999998652 22222 234558899999999944 557887755433 24556778777
Q ss_pred HHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCC--------CC-------CCCCCccc----c
Q 011049 331 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN--------KT-------LTPFGFQT----E 391 (494)
Q Consensus 331 ~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~--------~~-------~~~~~~~~----~ 391 (494)
.++.| + -+|+.++||++|+.+|+.++..+|+++++.|..+.... .. .....++. +
T Consensus 106 lld~L---g---~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E 179 (322)
T KOG4178|consen 106 LLDHL---G---LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPE 179 (322)
T ss_pred HHHHh---c---cceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcch
Confidence 77776 3 37999999999999999999999999999998765432 00 00000000 0
Q ss_pred -------------------------------ccccc---ccH-------------------HHHHhcCc--cccccCCCC
Q 011049 392 -------------------------------FRTLW---EAT-------------------NVYIEMSP--ITHANKIKK 416 (494)
Q Consensus 392 -------------------------------~~~~~---~~~-------------------~~~~~~sp--~~~~~~~~~ 416 (494)
....| ++. +.+....+ -....++++
T Consensus 180 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~i 259 (322)
T KOG4178|consen 180 TELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITI 259 (322)
T ss_pred hhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhcccccccccc
Confidence 00112 111 11222221 233456789
Q ss_pred CEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 417 PILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 417 P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
|++++.|++|...+ +..-.+.+++.... -.+.+++++.||... .+..+.+.+.++.||++..
T Consensus 260 Pv~fi~G~~D~v~~--~p~~~~~~rk~vp~--l~~~vv~~~~gH~vq-qe~p~~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 260 PVLFIWGDLDPVLP--YPIFGELYRKDVPR--LTERVVIEGIGHFVQ-QEKPQEVNQAILGFINSFS 321 (322)
T ss_pred ceEEEEecCccccc--chhHHHHHHHhhcc--ccceEEecCCccccc-ccCHHHHHHHHHHHHHhhc
Confidence 99999999999987 44222233322211 136789999999877 5788899999999998753
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.8e-14 Score=138.21 Aligned_cols=151 Identities=12% Similarity=0.077 Sum_probs=115.9
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
+.+||++++ .+|++++++..+.....|+|||||+.|+|+....+ ..+||+++++++ +.++++...... .
T Consensus 222 ~~~i~i~dl---~~G~~~~l~~~~~~~~~~~~SPDG~~La~~~~~~g-~~~I~~~d~~tg--~~~~lt~~~~~~-----~ 290 (429)
T PRK03629 222 RSALVIQTL---ANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTG-SLNLYVMDLASG--QIRQVTDGRSNN-----T 290 (429)
T ss_pred CcEEEEEEC---CCCCeEEccCCCCCcCCeEECCCCCEEEEEEcCCC-CcEEEEEECCCC--CEEEccCCCCCc-----C
Confidence 458999999 88999999887776778999999999999876555 568999999987 778888765332 4
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.|. |||||++|+|.+.. ...++||++|+++++.+++...... ...+.|
T Consensus 291 ~~~--wSPDG~~I~f~s~~------------------~g~~~Iy~~d~~~g~~~~lt~~~~~------------~~~~~~ 338 (429)
T PRK03629 291 EPT--WFPDSQNLAYTSDQ------------------AGRPQVYKVNINGGAPQRITWEGSQ------------NQDADV 338 (429)
T ss_pred ceE--ECCCCCEEEEEeCC------------------CCCceEEEEECCCCCeEEeecCCCC------------ccCEEE
Confidence 455 99999999998731 1234799999999888777543221 123589
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
||||+.+++.... .....++++++++++.+.|+.
T Consensus 339 SpDG~~Ia~~~~~-~g~~~I~~~dl~~g~~~~Lt~ 372 (429)
T PRK03629 339 SSDGKFMVMVSSN-GGQQHIAKQDLATGGVQVLTD 372 (429)
T ss_pred CCCCCEEEEEEcc-CCCceEEEEECCCCCeEEeCC
Confidence 9999998886543 334579999999888888874
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.1e-14 Score=129.57 Aligned_cols=195 Identities=13% Similarity=0.086 Sum_probs=120.8
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC-chhHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN-DRFVEQLVSSAEAAVE 333 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~-~~~~~~~~~d~~~~v~ 333 (494)
.|.||++||.+. +...|. .....| ..+|.|+.+|.+ |+|.+... ....++..+|+.++++
T Consensus 16 ~~~iv~lhG~~~-----------~~~~~~----~~~~~l-~~~~~vi~~D~~---G~G~s~~~~~~~~~~~~~d~~~~l~ 76 (255)
T PRK10673 16 NSPIVLVHGLFG-----------SLDNLG----VLARDL-VNDHDIIQVDMR---NHGLSPRDPVMNYPAMAQDLLDTLD 76 (255)
T ss_pred CCCEEEECCCCC-----------chhHHH----HHHHHH-hhCCeEEEECCC---CCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 588999999642 111121 122233 467999995554 55655332 2234566778877777
Q ss_pred HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC-CCCCCC-------------CCCcccc-c------
Q 011049 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS-YNKTLT-------------PFGFQTE-F------ 392 (494)
Q Consensus 334 ~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~-~~~~~~-------------~~~~~~~-~------ 392 (494)
++ ..+++.++|||+||.+++.++.++|++++++|++++. ...... ....... .
T Consensus 77 ~l------~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (255)
T PRK10673 77 AL------QIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMR 150 (255)
T ss_pred Hc------CCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHH
Confidence 64 2367999999999999999999999999999986432 110000 0000000 0
Q ss_pred -----------------ccccc--cH---HHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcE
Q 011049 393 -----------------RTLWE--AT---NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALS 450 (494)
Q Consensus 393 -----------------~~~~~--~~---~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~ 450 (494)
...|. .+ +.+........+.++++|+|+++|++|..++ ....+.+.+.+ ..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~~~----~~~ 224 (255)
T PRK10673 151 QHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVT--EAYRDDLLAQF----PQA 224 (255)
T ss_pred HhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCC--HHHHHHHHHhC----CCc
Confidence 00000 00 0111111122345678999999999999987 66555554443 346
Q ss_pred EEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 451 RLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 451 ~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
++.++++++|... .+....+.+.+.+||.+
T Consensus 225 ~~~~~~~~gH~~~-~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 225 RAHVIAGAGHWVH-AEKPDAVLRAIRRYLND 254 (255)
T ss_pred EEEEeCCCCCeee-ccCHHHHHHHHHHHHhc
Confidence 8899999999765 46677888899999875
|
|
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.1e-14 Score=131.47 Aligned_cols=195 Identities=17% Similarity=0.153 Sum_probs=121.4
Q ss_pred cEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCc---------hhHHHHHH
Q 011049 256 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---------RFVEQLVS 326 (494)
Q Consensus 256 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---------~~~~~~~~ 326 (494)
|.||++||.+.+. ..|. .....|+.+ |.|+++|. .|+|.+.... ...++..+
T Consensus 30 ~~vlllHG~~~~~-----------~~w~----~~~~~L~~~-~~vi~~Dl---pG~G~S~~~~~~~~~~~~~~~~~~~a~ 90 (294)
T PLN02824 30 PALVLVHGFGGNA-----------DHWR----KNTPVLAKS-HRVYAIDL---LGYGYSDKPNPRSAPPNSFYTFETWGE 90 (294)
T ss_pred CeEEEECCCCCCh-----------hHHH----HHHHHHHhC-CeEEEEcC---CCCCCCCCCccccccccccCCHHHHHH
Confidence 6799999965221 2232 234456655 68888555 4566554321 12345566
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCC---CCC-CCc------ccc-----
Q 011049 327 SAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT---LTP-FGF------QTE----- 391 (494)
Q Consensus 327 d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~---~~~-~~~------~~~----- 391 (494)
|+.+.++.+ + .+++.++|||+||.+++.++.++|++++++|++++..... ... ... ...
T Consensus 91 ~l~~~l~~l---~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (294)
T PLN02824 91 QLNDFCSDV---V---GDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETA 164 (294)
T ss_pred HHHHHHHHh---c---CCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchh
Confidence 666665544 3 2679999999999999999999999999999988643110 000 000 000
Q ss_pred --------c------cc----ccc-----cH----------------HHHHh---c----CccccccCCCCCEEEEecCC
Q 011049 392 --------F------RT----LWE-----AT----------------NVYIE---M----SPITHANKIKKPILIIHGEV 425 (494)
Q Consensus 392 --------~------~~----~~~-----~~----------------~~~~~---~----sp~~~~~~~~~P~li~~G~~ 425 (494)
. .. .+. .. ..+.+ . .....+.++++|+|+++|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~ 244 (294)
T PLN02824 165 VGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEK 244 (294)
T ss_pred HHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecC
Confidence 0 00 000 00 00000 0 01133567899999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 426 DDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 426 D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
|..+| ...++.+ .+.....++++++++||... .+....+.+.+.+||+++
T Consensus 245 D~~~~--~~~~~~~----~~~~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 245 DPWEP--VELGRAY----ANFDAVEDFIVLPGVGHCPQ-DEAPELVNPLIESFVARH 294 (294)
T ss_pred CCCCC--hHHHHHH----HhcCCccceEEeCCCCCChh-hhCHHHHHHHHHHHHhcC
Confidence 99987 6665443 33333368899999999876 477888999999999764
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=8.2e-14 Score=138.17 Aligned_cols=149 Identities=11% Similarity=0.121 Sum_probs=115.6
Q ss_pred eeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCC
Q 011049 19 IIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP 98 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~ 98 (494)
+||++|. +|+.+++++........|+|||||+.|+|++..++ ..+||+++++++ +.++++...+.. ..|
T Consensus 180 ~l~~~d~---~g~~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~-~~~l~~~~l~~g--~~~~l~~~~g~~-----~~~ 248 (430)
T PRK00178 180 TLQRSDY---DGARAVTLLQSREPILSPRWSPDGKRIAYVSFEQK-RPRIFVQNLDTG--RREQITNFEGLN-----GAP 248 (430)
T ss_pred EEEEECC---CCCCceEEecCCCceeeeeECCCCCEEEEEEcCCC-CCEEEEEECCCC--CEEEccCCCCCc-----CCe
Confidence 6999999 88889999888777789999999999999987655 679999999988 778887655432 344
Q ss_pred ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccc
Q 011049 99 MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINL 178 (494)
Q Consensus 99 ~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~ 178 (494)
. |||||++|+|.... .....||++|+++++.++++...+. ...+.|+|
T Consensus 249 ~--~SpDG~~la~~~~~------------------~g~~~Iy~~d~~~~~~~~lt~~~~~------------~~~~~~sp 296 (430)
T PRK00178 249 A--WSPDGSKLAFVLSK------------------DGNPEIYVMDLASRQLSRVTNHPAI------------DTEPFWGK 296 (430)
T ss_pred E--ECCCCCEEEEEEcc------------------CCCceEEEEECCCCCeEEcccCCCC------------cCCeEECC
Confidence 4 99999999998632 1124699999999988877654321 12458999
Q ss_pred cCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 179 NQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 179 d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
||+.++|.... ...+++|.+++.+++.++++.
T Consensus 297 Dg~~i~f~s~~-~g~~~iy~~d~~~g~~~~lt~ 328 (430)
T PRK00178 297 DGRTLYFTSDR-GGKPQIYKVNVNGGRAERVTF 328 (430)
T ss_pred CCCEEEEEECC-CCCceEEEEECCCCCEEEeec
Confidence 99999887543 334689999998888887764
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.6e-14 Score=132.25 Aligned_cols=193 Identities=18% Similarity=0.187 Sum_probs=118.4
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC--chhHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAV 332 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~v 332 (494)
.|+||++||.+.+ ...|. ... .....||.|++++.+ |+|.+... .....+.++|+.+.+
T Consensus 13 ~~~li~~hg~~~~-----------~~~~~----~~~-~~l~~~~~v~~~d~~---G~G~s~~~~~~~~~~~~~~~~~~~i 73 (251)
T TIGR02427 13 APVLVFINSLGTD-----------LRMWD----PVL-PALTPDFRVLRYDKR---GHGLSDAPEGPYSIEDLADDVLALL 73 (251)
T ss_pred CCeEEEEcCcccc-----------hhhHH----HHH-HHhhcccEEEEecCC---CCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 5899999985421 11121 222 334579999996664 45544322 112345555665555
Q ss_pred HHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC-CC----------Ccc------------
Q 011049 333 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT-PF----------GFQ------------ 389 (494)
Q Consensus 333 ~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~-~~----------~~~------------ 389 (494)
+.+ +.+++.++|||+||++++.++.++|++++++|+.++....... .+ ...
T Consensus 74 ~~~------~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (251)
T TIGR02427 74 DHL------GIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFT 147 (251)
T ss_pred HHh------CCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcc
Confidence 543 3468999999999999999999999999998887754321100 00 000
Q ss_pred cccc--c-----ccc------cH-------HHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCc
Q 011049 390 TEFR--T-----LWE------AT-------NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGAL 449 (494)
Q Consensus 390 ~~~~--~-----~~~------~~-------~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~ 449 (494)
.... . .+. .. ..+...+....+.++++|+|+++|++|..+| ......+.+.+. .
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~--~~~~~~~~~~~~----~ 221 (251)
T TIGR02427 148 PGFREAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTP--PELVREIADLVP----G 221 (251)
T ss_pred cccccCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCC--hHHHHHHHHhCC----C
Confidence 0000 0 000 00 0011112233456788999999999999997 776666665553 3
Q ss_pred EEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 450 SRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 450 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
.+++++++++|.... +....+.+.+.+||
T Consensus 222 ~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl 250 (251)
T TIGR02427 222 ARFAEIRGAGHIPCV-EQPEAFNAALRDFL 250 (251)
T ss_pred ceEEEECCCCCcccc-cChHHHHHHHHHHh
Confidence 578999999998764 55667777777776
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.9e-14 Score=129.81 Aligned_cols=214 Identities=14% Similarity=0.126 Sum_probs=132.4
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
.+|.++.+...... ++ .|.||++||.+.+ ...|. ..... .+.+|.|+++|. .|+
T Consensus 9 ~~~~~~~~~~~~~~---~~----~~plvllHG~~~~-----------~~~w~----~~~~~-L~~~~~vi~~Dl---~G~ 62 (276)
T TIGR02240 9 LDGQSIRTAVRPGK---EG----LTPLLIFNGIGAN-----------LELVF----PFIEA-LDPDLEVIAFDV---PGV 62 (276)
T ss_pred cCCcEEEEEEecCC---CC----CCcEEEEeCCCcc-----------hHHHH----HHHHH-hccCceEEEECC---CCC
Confidence 47777777654211 11 3568999995421 11121 12223 346799999555 466
Q ss_pred CCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC------
Q 011049 312 GDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL------ 383 (494)
Q Consensus 312 g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~------ 383 (494)
|.+... ....+...+|+.+.++.+ +.+++.++|||+||.+++.++.++|++++++|++++......
T Consensus 63 G~S~~~~~~~~~~~~~~~~~~~i~~l------~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 136 (276)
T TIGR02240 63 GGSSTPRHPYRFPGLAKLAARMLDYL------DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPK 136 (276)
T ss_pred CCCCCCCCcCcHHHHHHHHHHHHHHh------CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchh
Confidence 665432 122455566766666665 236799999999999999999999999999999886542100
Q ss_pred ------CCCCcccc----------ccccc-ccHH----------------HHH------hcCccccccCCCCCEEEEecC
Q 011049 384 ------TPFGFQTE----------FRTLW-EATN----------------VYI------EMSPITHANKIKKPILIIHGE 424 (494)
Q Consensus 384 ------~~~~~~~~----------~~~~~-~~~~----------------~~~------~~sp~~~~~~~~~P~li~~G~ 424 (494)
....+... ..... .+++ .+. .......+.++++|+|+++|+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 216 (276)
T TIGR02240 137 VLMMMASPRRYIQPSHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGD 216 (276)
T ss_pred HHHHhcCchhhhccccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeC
Confidence 00000000 00000 0000 000 011223357889999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 425 VDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 425 ~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
+|..+| +..++++.+.+.. .++.++++ ||... .+....+.+.+.+|+++.-.+
T Consensus 217 ~D~~v~--~~~~~~l~~~~~~----~~~~~i~~-gH~~~-~e~p~~~~~~i~~fl~~~~~~ 269 (276)
T TIGR02240 217 DDPIIP--LINMRLLAWRIPN----AELHIIDD-GHLFL-ITRAEAVAPIIMKFLAEERQR 269 (276)
T ss_pred CCCcCC--HHHHHHHHHhCCC----CEEEEEcC-CCchh-hccHHHHHHHHHHHHHHhhhh
Confidence 999998 8877777766543 56777776 99866 467778899999999886544
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=9.4e-14 Score=137.35 Aligned_cols=151 Identities=12% Similarity=0.136 Sum_probs=116.2
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
+.+||++|. +++.+++||.+......|+|||||+.|+|.+...+ ..+||+++++++ +.++++...+.. .
T Consensus 183 ~~~l~i~D~---~g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~-~~~l~~~dl~~g--~~~~l~~~~g~~-----~ 251 (433)
T PRK04922 183 RYALQVADS---DGYNPQTILRSAEPILSPAWSPDGKKLAYVSFERG-RSAIYVQDLATG--QRELVASFRGIN-----G 251 (433)
T ss_pred eEEEEEECC---CCCCceEeecCCCccccccCCCCCCEEEEEecCCC-CcEEEEEECCCC--CEEEeccCCCCc-----c
Confidence 347999999 88889999998877889999999999999987555 678999999987 777887665432 3
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.|. |||||++|+|.... ....+||++|+++++.++++...+. ...+.|
T Consensus 252 ~~~--~SpDG~~l~~~~s~------------------~g~~~Iy~~d~~~g~~~~lt~~~~~------------~~~~~~ 299 (433)
T PRK04922 252 APS--FSPDGRRLALTLSR------------------DGNPEIYVMDLGSRQLTRLTNHFGI------------DTEPTW 299 (433)
T ss_pred Cce--ECCCCCEEEEEEeC------------------CCCceEEEEECCCCCeEECccCCCC------------ccceEE
Confidence 445 99999999998632 1124699999999988777654321 124589
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
+|||+++++.... ...+++|.+++++++.++++.
T Consensus 300 spDG~~l~f~sd~-~g~~~iy~~dl~~g~~~~lt~ 333 (433)
T PRK04922 300 APDGKSIYFTSDR-GGRPQIYRVAASGGSAERLTF 333 (433)
T ss_pred CCCCCEEEEEECC-CCCceEEEEECCCCCeEEeec
Confidence 9999999887543 234689999998888877764
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.5e-14 Score=127.64 Aligned_cols=155 Identities=23% Similarity=0.195 Sum_probs=93.9
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC---------CCCccccc--cccc
Q 011049 328 AEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT---------PFGFQTEF--RTLW 396 (494)
Q Consensus 328 ~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~---------~~~~~~~~--~~~~ 396 (494)
+..+++||.+++.+++++|+|+|.|.||-+|+.+++++| .++|+|+++|..-.... +..+.... ...+
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~~~ 84 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKFSW 84 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG-EE
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhhcee
Confidence 468899999999999999999999999999999999996 78999998875321100 00000000 0000
Q ss_pred ccH------HHHH------hcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCc--EEEEEcCCCCCcc
Q 011049 397 EAT------NVYI------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGAL--SRLVLLPFEHHVY 462 (494)
Q Consensus 397 ~~~------~~~~------~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~--~~~~~~~~~~H~~ 462 (494)
... ..+. .....-.+.++++|+|+++|++|...| ....+..+.+.|++++.+ ++++.||++||.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~Wp-S~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 85 NEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWP-SSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLI 163 (213)
T ss_dssp -TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS--HHHHHHHHHHHHHCTT-----EEEEETTB-S--
T ss_pred cCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccc-hHHHHHHHHHHHHHhCCCCcceEEEcCCCCcee
Confidence 000 0000 011122367789999999999999987 244556778889998865 8889999999986
Q ss_pred CCc---------------------------ccHHHHHHHHHHHHHHhcC
Q 011049 463 AAR---------------------------ENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 463 ~~~---------------------------~~~~~~~~~~~~fl~~~l~ 484 (494)
..+ ...++.+.++++||++||.
T Consensus 164 ~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 164 EPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp -STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred cCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 311 0235678899999999986
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.7e-14 Score=127.55 Aligned_cols=195 Identities=11% Similarity=0.074 Sum_probs=121.5
Q ss_pred EEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC---chhHHHHHHHHHHHHH
Q 011049 257 CLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVE 333 (494)
Q Consensus 257 ~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v~ 333 (494)
.||++||.+.+ ...|. .....|+++||.|+++|. +|+|.+... ....+...+|+.+.++
T Consensus 5 ~vvllHG~~~~-----------~~~w~----~~~~~L~~~~~~via~Dl---~G~G~S~~~~~~~~~~~~~a~dl~~~l~ 66 (255)
T PLN02965 5 HFVFVHGASHG-----------AWCWY----KLATLLDAAGFKSTCVDL---TGAGISLTDSNTVSSSDQYNRPLFALLS 66 (255)
T ss_pred EEEEECCCCCC-----------cCcHH----HHHHHHhhCCceEEEecC---CcCCCCCCCccccCCHHHHHHHHHHHHH
Confidence 48999997521 11121 234466788999999555 456655322 1224566677777666
Q ss_pred HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC---CCC-C-------C----CCCc--ccccccc-
Q 011049 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY---NKT-L-------T----PFGF--QTEFRTL- 395 (494)
Q Consensus 334 ~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~---~~~-~-------~----~~~~--~~~~~~~- 395 (494)
.+ + + .+++.++||||||.++..++.++|++++.+|..++.. ... . . .+.+ .......
T Consensus 67 ~l---~-~-~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (255)
T PLN02965 67 DL---P-P-DHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPP 141 (255)
T ss_pred hc---C-C-CCCEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCc
Confidence 54 2 1 1589999999999999999999999999999877541 100 0 0 0000 0000000
Q ss_pred ---cccHH---H-H-------------Hh--cCcc----------ccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHH
Q 011049 396 ---WEATN---V-Y-------------IE--MSPI----------THANKIKKPILIIHGEVDDKVGLFPMQAERFFDAL 443 (494)
Q Consensus 396 ---~~~~~---~-~-------------~~--~sp~----------~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l 443 (494)
....+ . + .. ..+. ..+.++++|+|+++|++|..+| +..++.+.+.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~--~~~~~~~~~~~ 219 (255)
T PLN02965 142 TGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFD--PVRQDVMVENW 219 (255)
T ss_pred chhhcCHHHHHHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCC--HHHHHHHHHhC
Confidence 00000 0 0 00 0000 1233588999999999999998 77666666555
Q ss_pred HhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 444 KGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 444 ~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
. ..++.+++++||.... +..+.+.+.+.+|+++
T Consensus 220 ~----~a~~~~i~~~GH~~~~-e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 220 P----PAQTYVLEDSDHSAFF-SVPTTLFQYLLQAVSS 252 (255)
T ss_pred C----cceEEEecCCCCchhh-cCHHHHHHHHHHHHHH
Confidence 4 3578999999999874 7788888888888764
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.3e-13 Score=136.67 Aligned_cols=152 Identities=11% Similarity=0.123 Sum_probs=116.4
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
+.+||++++ ++++.++++..+.....|+|||||+.|+|....++ ..+||+++++++ +.++++.....+ .
T Consensus 222 ~~~l~~~~l---~~g~~~~l~~~~g~~~~~~~SpDG~~la~~~~~~g-~~~Iy~~d~~~~--~~~~lt~~~~~~-----~ 290 (430)
T PRK00178 222 RPRIFVQNL---DTGRREQITNFEGLNGAPAWSPDGSKLAFVLSKDG-NPEIYVMDLASR--QLSRVTNHPAID-----T 290 (430)
T ss_pred CCEEEEEEC---CCCCEEEccCCCCCcCCeEECCCCCEEEEEEccCC-CceEEEEECCCC--CeEEcccCCCCc-----C
Confidence 348999999 88898999887766778999999999999887666 679999999987 778888755433 4
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.|. |||||++|+|.+.. ...++||++|+.+|+.++++..... ...+.|
T Consensus 291 ~~~--~spDg~~i~f~s~~------------------~g~~~iy~~d~~~g~~~~lt~~~~~------------~~~~~~ 338 (430)
T PRK00178 291 EPF--WGKDGRTLYFTSDR------------------GGKPQIYKVNVNGGRAERVTFVGNY------------NARPRL 338 (430)
T ss_pred CeE--ECCCCCEEEEEECC------------------CCCceEEEEECCCCCEEEeecCCCC------------ccceEE
Confidence 455 99999999998631 1234699999999988777643211 123579
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecC
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQITNF 212 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~ 212 (494)
||||+.+++..... ....|+++++++++.+.|+..
T Consensus 339 Spdg~~i~~~~~~~-~~~~l~~~dl~tg~~~~lt~~ 373 (430)
T PRK00178 339 SADGKTLVMVHRQD-GNFHVAAQDLQRGSVRILTDT 373 (430)
T ss_pred CCCCCEEEEEEccC-CceEEEEEECCCCCEEEccCC
Confidence 99999998876432 345799999999888888753
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.7e-13 Score=135.03 Aligned_cols=151 Identities=10% Similarity=0.145 Sum_probs=114.8
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
+.+||++|+ .+++.++++..+.....|+|||||+.|+|+...++ ..+||+++++++ +.++++.....+ .
T Consensus 219 ~~~I~~~dl---~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g-~~~Iy~~d~~~~--~~~~lt~~~~~~-----~ 287 (427)
T PRK02889 219 KPVVYVHDL---ATGRRRVVANFKGSNSAPAWSPDGRTLAVALSRDG-NSQIYTVNADGS--GLRRLTQSSGID-----T 287 (427)
T ss_pred CcEEEEEEC---CCCCEEEeecCCCCccceEECCCCCEEEEEEccCC-CceEEEEECCCC--CcEECCCCCCCC-----c
Confidence 347999999 88888889877767778999999999999877666 689999999887 778888755433 3
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.|. |||||++|+|.+.. ...++||.+++++++.++++..... ...+.|
T Consensus 288 ~~~--wSpDG~~l~f~s~~------------------~g~~~Iy~~~~~~g~~~~lt~~g~~------------~~~~~~ 335 (427)
T PRK02889 288 EPF--FSPDGRSIYFTSDR------------------GGAPQIYRMPASGGAAQRVTFTGSY------------NTSPRI 335 (427)
T ss_pred CeE--EcCCCCEEEEEecC------------------CCCcEEEEEECCCCceEEEecCCCC------------cCceEE
Confidence 455 99999999998631 1234699999998887777643211 123589
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
||||+.+++.... ....+|+++++.+++.++++.
T Consensus 336 SpDG~~Ia~~s~~-~g~~~I~v~d~~~g~~~~lt~ 369 (427)
T PRK02889 336 SPDGKLLAYISRV-GGAFKLYVQDLATGQVTALTD 369 (427)
T ss_pred CCCCCEEEEEEcc-CCcEEEEEEECCCCCeEEccC
Confidence 9999999886543 223479999998888887764
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.4e-13 Score=136.20 Aligned_cols=151 Identities=13% Similarity=0.066 Sum_probs=116.0
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
+.+||++++ ++++.++++..+.....|+|||||+.|+|+...++ +.+||+++++++ +.++||.....+ .
T Consensus 225 ~~~i~~~dl---~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g-~~~Iy~~d~~~~--~~~~Lt~~~~~~-----~ 293 (435)
T PRK05137 225 RPRVYLLDL---ETGQRELVGNFPGMTFAPRFSPDGRKVVMSLSQGG-NTDIYTMDLRSG--TTTRLTDSPAID-----T 293 (435)
T ss_pred CCEEEEEEC---CCCcEEEeecCCCcccCcEECCCCCEEEEEEecCC-CceEEEEECCCC--ceEEccCCCCcc-----C
Confidence 358999999 88888999987777789999999999999887666 689999999988 778898766443 3
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.|. |||||++|+|.+.. ...++||++|+++++.++++...+. ...+.|
T Consensus 294 ~~~--~spDG~~i~f~s~~------------------~g~~~Iy~~d~~g~~~~~lt~~~~~------------~~~~~~ 341 (435)
T PRK05137 294 SPS--YSPDGSQIVFESDR------------------SGSPQLYVMNADGSNPRRISFGGGR------------YSTPVW 341 (435)
T ss_pred cee--EcCCCCEEEEEECC------------------CCCCeEEEEECCCCCeEEeecCCCc------------ccCeEE
Confidence 455 99999999998731 1134699999999988888754322 123579
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
||||+.+++..... ....+++++++++..+.++.
T Consensus 342 SpdG~~ia~~~~~~-~~~~i~~~d~~~~~~~~lt~ 375 (435)
T PRK05137 342 SPRGDLIAFTKQGG-GQFSIGVMKPDGSGERILTS 375 (435)
T ss_pred CCCCCEEEEEEcCC-CceEEEEEECCCCceEeccC
Confidence 99999998876432 23478999987776666653
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.3e-13 Score=134.88 Aligned_cols=222 Identities=14% Similarity=0.143 Sum_probs=132.2
Q ss_pred EEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHH---hCCeEEEeC
Q 011049 227 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL---ARRFAVLAG 303 (494)
Q Consensus 227 ~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~G~~v~~~ 303 (494)
..|.+..|.++++....|++. .+.|.||++||.+.+ ...|.. .....|+ .++|.|+++
T Consensus 178 ~~~~~~~~~~l~~~~~gp~~~-----~~k~~VVLlHG~~~s-----------~~~W~~---~~~~~L~~~~~~~yrVia~ 238 (481)
T PLN03087 178 TSWLSSSNESLFVHVQQPKDN-----KAKEDVLFIHGFISS-----------SAFWTE---TLFPNFSDAAKSTYRLFAV 238 (481)
T ss_pred eeeEeeCCeEEEEEEecCCCC-----CCCCeEEEECCCCcc-----------HHHHHH---HHHHHHHHHhhCCCEEEEE
Confidence 345555667888888888752 114789999996421 111211 1112233 479999996
Q ss_pred CCCCCCCCCCCCCC--c-hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCC
Q 011049 304 PSIPIIGEGDKLPN--D-RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 380 (494)
Q Consensus 304 ~~~~~~g~g~~~~~--~-~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~ 380 (494)
|.+ |+|.+... . ...++..+|+. ..+++. ...+++.++|||+||++++.++.++|++++++|++++...
T Consensus 239 Dl~---G~G~S~~p~~~~ytl~~~a~~l~---~~ll~~--lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~ 310 (481)
T PLN03087 239 DLL---GFGRSPKPADSLYTLREHLEMIE---RSVLER--YKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYY 310 (481)
T ss_pred CCC---CCCCCcCCCCCcCCHHHHHHHHH---HHHHHH--cCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCcc
Confidence 654 56655322 1 11233344442 122232 1236899999999999999999999999999999876432
Q ss_pred CCCC----------------CC---Cccc------c--ccc----------cccc----------HHHHH----hc--Cc
Q 011049 381 KTLT----------------PF---GFQT------E--FRT----------LWEA----------TNVYI----EM--SP 407 (494)
Q Consensus 381 ~~~~----------------~~---~~~~------~--~~~----------~~~~----------~~~~~----~~--sp 407 (494)
.... .+ .+.. + ... .|+. ...+. .. .+
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~ 390 (481)
T PLN03087 311 PVPKGVQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNA 390 (481)
T ss_pred ccccchhHHHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchh
Confidence 1000 00 0000 0 000 0110 00000 00 00
Q ss_pred c--------------------ccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCccc
Q 011049 408 I--------------------THANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAREN 467 (494)
Q Consensus 408 ~--------------------~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 467 (494)
. ....++++|+|+++|++|..+| +..++.+.+.+. ..++++++++||.....+.
T Consensus 391 ~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP--~~~~~~la~~iP----~a~l~vI~~aGH~~~v~e~ 464 (481)
T PLN03087 391 AWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIP--VECSYAVKAKVP----RARVKVIDDKDHITIVVGR 464 (481)
T ss_pred hHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCC--HHHHHHHHHhCC----CCEEEEeCCCCCcchhhcC
Confidence 0 0112588999999999999998 888777766664 3689999999998664466
Q ss_pred HHHHHHHHHHHHHH
Q 011049 468 VMHVIWETDRWLQK 481 (494)
Q Consensus 468 ~~~~~~~~~~fl~~ 481 (494)
...+.+.+.+|+..
T Consensus 465 p~~fa~~L~~F~~~ 478 (481)
T PLN03087 465 QKEFARELEEIWRR 478 (481)
T ss_pred HHHHHHHHHHHhhc
Confidence 67888888888754
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.9e-14 Score=127.41 Aligned_cols=195 Identities=18% Similarity=0.125 Sum_probs=113.6
Q ss_pred cEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHH-HHH
Q 011049 256 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAA-VEE 334 (494)
Q Consensus 256 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~-v~~ 334 (494)
|+||++||.+. +...|. .....|+ +||.|+.++.+ |+|.+...........+++... +..
T Consensus 2 ~~vv~~hG~~~-----------~~~~~~----~~~~~L~-~~~~v~~~d~~---g~G~s~~~~~~~~~~~~~~~~~~~~~ 62 (251)
T TIGR03695 2 PVLVFLHGFLG-----------SGADWQ----ALIELLG-PHFRCLAIDLP---GHGSSQSPDEIERYDFEEAAQDILAT 62 (251)
T ss_pred CEEEEEcCCCC-----------chhhHH----HHHHHhc-ccCeEEEEcCC---CCCCCCCCCccChhhHHHHHHHHHHH
Confidence 67999999642 111221 2334555 89999996654 5555533211111112222222 333
Q ss_pred HHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC-----CC--------cccc----------
Q 011049 335 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-----FG--------FQTE---------- 391 (494)
Q Consensus 335 l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~-----~~--------~~~~---------- 391 (494)
+.+. .+.+++.++|||+||.+++.++.++|+.++++++.++........ .. +...
T Consensus 63 ~~~~--~~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (251)
T TIGR03695 63 LLDQ--LGIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWY 140 (251)
T ss_pred HHHH--cCCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHh
Confidence 4333 234789999999999999999999999999999887653211000 00 0000
Q ss_pred ----ccc---cc-ccH----------------HHHH------hcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHH
Q 011049 392 ----FRT---LW-EAT----------------NVYI------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFD 441 (494)
Q Consensus 392 ----~~~---~~-~~~----------------~~~~------~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~ 441 (494)
... .. ... ..+. ..++...+.++++|+|+++|++|..++ . ..+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~---~----~~~ 213 (251)
T TIGR03695 141 QQPLFASQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV---Q----IAK 213 (251)
T ss_pred cCceeeecccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH---H----HHH
Confidence 000 00 000 0000 012223456788999999999998642 2 233
Q ss_pred HHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 442 ALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 442 ~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
.+.+...+++++++++++|.+.. +....+...+.+||
T Consensus 214 ~~~~~~~~~~~~~~~~~gH~~~~-e~~~~~~~~i~~~l 250 (251)
T TIGR03695 214 EMQKLLPNLTLVIIANAGHNIHL-ENPEAFAKILLAFL 250 (251)
T ss_pred HHHhcCCCCcEEEEcCCCCCcCc-cChHHHHHHHHHHh
Confidence 44444456789999999998764 55667777788886
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.7e-13 Score=132.09 Aligned_cols=199 Identities=15% Similarity=0.124 Sum_probs=121.7
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCc---hhHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~ 331 (494)
.|.||++||.+.+ ...|. .....| +.+|.|+.+|.+ |+|.+.... ...+...+++.+.
T Consensus 88 gp~lvllHG~~~~-----------~~~w~----~~~~~L-~~~~~via~Dl~---G~G~S~~~~~~~~~~~~~a~~l~~~ 148 (360)
T PLN02679 88 GPPVLLVHGFGAS-----------IPHWR----RNIGVL-AKNYTVYAIDLL---GFGASDKPPGFSYTMETWAELILDF 148 (360)
T ss_pred CCeEEEECCCCCC-----------HHHHH----HHHHHH-hcCCEEEEECCC---CCCCCCCCCCccccHHHHHHHHHHH
Confidence 3789999996521 11121 122234 458999995554 566554321 1234555565555
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHH-hCCCceeEEEeCCCCCCCCC----CCCC----------c--------
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA-HAPHLFCCGIARSGSYNKTL----TPFG----------F-------- 388 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~p~~~~a~v~~~~~~~~~~----~~~~----------~-------- 388 (494)
++.+ + .+++.++|||+||.+++.++. ++|++++++|++++...... ..+. +
T Consensus 149 l~~l---~---~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (360)
T PLN02679 149 LEEV---V---QKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRG 222 (360)
T ss_pred HHHh---c---CCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchh
Confidence 5543 2 368999999999999988887 47999999998876431100 0000 0
Q ss_pred ------cc----c-c--------ccccc-c----------------HHHHHh-------cCccccccCCCCCEEEEecCC
Q 011049 389 ------QT----E-F--------RTLWE-A----------------TNVYIE-------MSPITHANKIKKPILIIHGEV 425 (494)
Q Consensus 389 ------~~----~-~--------~~~~~-~----------------~~~~~~-------~sp~~~~~~~~~P~li~~G~~ 425 (494)
.. . . ..... . ...+.. .+....+.++++|+|+++|++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~ 302 (360)
T PLN02679 223 IASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQ 302 (360)
T ss_pred hHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCC
Confidence 00 0 0 00000 0 000110 011234567889999999999
Q ss_pred CCCCCCCHHHH-HHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 426 DDKVGLFPMQA-ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 426 D~~v~~~~~~~-~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
|..+| +... .++++.+.+.-.+.++++++++||... .+..+.+.+.+.+||.+
T Consensus 303 D~~~p--~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~-~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 303 DPFTP--LDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPH-DDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred CCCcC--chhhHHHHHHhhhccCCceEEEEcCCCCCCcc-ccCHHHHHHHHHHHHHh
Confidence 99987 5532 235555655545689999999999876 47788899999999975
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.3e-13 Score=133.38 Aligned_cols=155 Identities=15% Similarity=0.120 Sum_probs=111.8
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEE--cCCCC-CCCceEeeecccccccC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLV--CPGSK-DVAPRVLFDRVFENVYS 93 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~--~~~~g-~~~~~~lt~~~~~~~~~ 93 (494)
+.+||++++ ++|+.++||..+.....|+|||||++|+|++...+ +.++|++ +++++ .++++++|......
T Consensus 210 ~~~I~~~~l---~~g~~~~lt~~~g~~~~p~wSPDG~~Laf~s~~~g-~~di~~~~~~~~~g~~g~~~~lt~~~~~~--- 282 (428)
T PRK01029 210 VPKIFLGSL---ENPAGKKILALQGNQLMPTFSPRKKLLAFISDRYG-NPDLFIQSFSLETGAIGKPRRLLNEAFGT--- 282 (428)
T ss_pred CceEEEEEC---CCCCceEeecCCCCccceEECCCCCEEEEEECCCC-CcceeEEEeecccCCCCcceEeecCCCCC---
Confidence 458999999 89999999998888889999999999999987655 5678886 44432 13678888653221
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCC--CceEEEEeeCcchhhhheeeeccCC
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINT--GSKERIWESNREKYFETAVALVFGQ 171 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~--g~~~~l~~~~~~~~~~~~~~~~s~~ 171 (494)
...|. |||||++|+|.+.. ....+||++++++ ++.++++...+. .
T Consensus 283 -~~~p~--wSPDG~~Laf~s~~------------------~g~~~ly~~~~~~~g~~~~~lt~~~~~------------~ 329 (428)
T PRK01029 283 -QGNPS--FSPDGTRLVFVSNK------------------DGRPRIYIMQIDPEGQSPRLLTKKYRN------------S 329 (428)
T ss_pred -cCCeE--ECCCCCEEEEEECC------------------CCCceEEEEECcccccceEEeccCCCC------------c
Confidence 14455 99999999998731 1223688888753 445555543221 1
Q ss_pred CcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecC
Q 011049 172 GEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNF 212 (494)
Q Consensus 172 ~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~ 212 (494)
..+.|||||+++++..... ...+|+++++++++.++|+..
T Consensus 330 ~~p~wSPDG~~Laf~~~~~-g~~~I~v~dl~~g~~~~Lt~~ 369 (428)
T PRK01029 330 SCPAWSPDGKKIAFCSVIK-GVRQICVYDLATGRDYQLTTS 369 (428)
T ss_pred cceeECCCCCEEEEEEcCC-CCcEEEEEECCCCCeEEccCC
Confidence 2458999999999876542 346899999999988888743
|
|
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.3e-13 Score=125.61 Aligned_cols=212 Identities=13% Similarity=0.095 Sum_probs=129.3
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
.+|.++.+... + . .|.||++||.+.+ ...|. .....|++++ .|+++|.+ |+
T Consensus 14 ~~g~~i~y~~~---G-----~--g~~vvllHG~~~~-----------~~~w~----~~~~~L~~~~-~via~D~~---G~ 64 (295)
T PRK03592 14 VLGSRMAYIET---G-----E--GDPIVFLHGNPTS-----------SYLWR----NIIPHLAGLG-RCLAPDLI---GM 64 (295)
T ss_pred ECCEEEEEEEe---C-----C--CCEEEEECCCCCC-----------HHHHH----HHHHHHhhCC-EEEEEcCC---CC
Confidence 37777665543 1 1 3679999996521 11222 2444666676 88885554 56
Q ss_pred CCCCCCc--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC---CCC
Q 011049 312 GDKLPND--RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL---TPF 386 (494)
Q Consensus 312 g~~~~~~--~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~---~~~ 386 (494)
|.+.... .......+|+.+.++.+ + .+++.++|||+||.+++.++.++|++++++|.+++...... ...
T Consensus 65 G~S~~~~~~~~~~~~a~dl~~ll~~l---~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~ 138 (295)
T PRK03592 65 GASDKPDIDYTFADHARYLDAWFDAL---G---LDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPP 138 (295)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh---C---CCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcch
Confidence 6554321 22455566666665554 2 36899999999999999999999999999998886432100 000
Q ss_pred C-------cc--c--c-------------cccc---cccHH---HHH-----------------hcCc------------
Q 011049 387 G-------FQ--T--E-------------FRTL---WEATN---VYI-----------------EMSP------------ 407 (494)
Q Consensus 387 ~-------~~--~--~-------------~~~~---~~~~~---~~~-----------------~~sp------------ 407 (494)
. +. . . .... .-.++ .+. ...+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (295)
T PRK03592 139 AVRELFQALRSPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVE 218 (295)
T ss_pred hHHHHHHHHhCcccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhh
Confidence 0 00 0 0 0000 00000 000 0000
Q ss_pred --cccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 408 --ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 408 --~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
...+.++++|+|+++|++|..++ +....++...+.. +.++.+++++||... .+..+.+.+.+.+|+.+...
T Consensus 219 ~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~~---~~~~~~i~~~gH~~~-~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 219 EYAQWLATSDVPKLLINAEPGAILT--TGAIRDWCRSWPN---QLEITVFGAGLHFAQ-EDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred HhHHHhccCCCCeEEEeccCCcccC--cHHHHHHHHHhhh---hcceeeccCcchhhh-hcCHHHHHHHHHHHHHHhcc
Confidence 11245678999999999999985 4544455443332 368889999999987 46788899999999987643
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.56 E-value=8.4e-13 Score=128.61 Aligned_cols=204 Identities=17% Similarity=0.114 Sum_probs=120.2
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCch---hHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDR---FVEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~---~~~~~~~d~~~~ 331 (494)
.|+||++||.+... ..|. .....|+ ++|.|+++|.+ |+|.+..... ......+.+.+.
T Consensus 105 ~p~vvllHG~~~~~-----------~~~~----~~~~~L~-~~~~vi~~D~r---G~G~S~~~~~~~~~~~~~~~~~~~~ 165 (402)
T PLN02894 105 APTLVMVHGYGASQ-----------GFFF----RNFDALA-SRFRVIAIDQL---GWGGSSRPDFTCKSTEETEAWFIDS 165 (402)
T ss_pred CCEEEEECCCCcch-----------hHHH----HHHHHHH-hCCEEEEECCC---CCCCCCCCCcccccHHHHHHHHHHH
Confidence 58999999965211 1111 1233444 56999996655 4555432211 111111222222
Q ss_pred -HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC-C-----------C-----------C
Q 011049 332 -VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT-P-----------F-----------G 387 (494)
Q Consensus 332 -v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~-~-----------~-----------~ 387 (494)
.+++... +.+++.++|||+||++++.++.++|++++++|+.+|....... . + .
T Consensus 166 i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (402)
T PLN02894 166 FEEWRKAK---NLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESN 242 (402)
T ss_pred HHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcC
Confidence 2344333 3468999999999999999999999999999988765311000 0 0 0
Q ss_pred c-c---------------ccc----------c--cccccHHHH---H-----------------------hcCcc-cccc
Q 011049 388 F-Q---------------TEF----------R--TLWEATNVY---I-----------------------EMSPI-THAN 412 (494)
Q Consensus 388 ~-~---------------~~~----------~--~~~~~~~~~---~-----------------------~~sp~-~~~~ 412 (494)
+ . ... . ...+..+.+ . ...+. ..+.
T Consensus 243 ~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 322 (402)
T PLN02894 243 FTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESAS 322 (402)
T ss_pred CCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcc
Confidence 0 0 000 0 000000000 0 01122 2367
Q ss_pred CCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCCCC
Q 011049 413 KIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 413 ~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~ 487 (494)
++++|+++++|++|..++ ....++.+.+ +.++++++++++||... .++...+.+.+.+|++.++....
T Consensus 323 ~I~vP~liI~G~~D~i~~---~~~~~~~~~~---~~~~~~~~i~~aGH~~~-~E~P~~f~~~l~~~~~~~~~~~~ 390 (402)
T PLN02894 323 EWKVPTTFIYGRHDWMNY---EGAVEARKRM---KVPCEIIRVPQGGHFVF-LDNPSGFHSAVLYACRKYLSPDR 390 (402)
T ss_pred cCCCCEEEEEeCCCCCCc---HHHHHHHHHc---CCCCcEEEeCCCCCeee-ccCHHHHHHHHHHHHHHhccCCc
Confidence 789999999999998653 4444443333 44578999999999866 47788899999999999987643
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.3e-13 Score=132.67 Aligned_cols=151 Identities=15% Similarity=0.146 Sum_probs=114.7
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
+.+||++++ .+++.++++..+.....|+|||||+.|+|+...++ +.+||+++++++ +.++++.....+ .
T Consensus 227 ~~~l~~~dl---~~g~~~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g-~~~Iy~~d~~~g--~~~~lt~~~~~~-----~ 295 (433)
T PRK04922 227 RSAIYVQDL---ATGQRELVASFRGINGAPSFSPDGRRLALTLSRDG-NPEIYVMDLGSR--QLTRLTNHFGID-----T 295 (433)
T ss_pred CcEEEEEEC---CCCCEEEeccCCCCccCceECCCCCEEEEEEeCCC-CceEEEEECCCC--CeEECccCCCCc-----c
Confidence 347999999 88888889877766778999999999999887666 679999999987 778888654332 3
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.|. |||||++|+|.+.. ...++||.+|+++++.++++..... ...+.|
T Consensus 296 ~~~--~spDG~~l~f~sd~------------------~g~~~iy~~dl~~g~~~~lt~~g~~------------~~~~~~ 343 (433)
T PRK04922 296 EPT--WAPDGKSIYFTSDR------------------GGRPQIYRVAASGGSAERLTFQGNY------------NARASV 343 (433)
T ss_pred ceE--ECCCCCEEEEEECC------------------CCCceEEEEECCCCCeEEeecCCCC------------ccCEEE
Confidence 444 99999999998731 1234699999999888887643211 123589
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
||||+.+++.... .....|+++++.+++.+.|+.
T Consensus 344 SpDG~~Ia~~~~~-~~~~~I~v~d~~~g~~~~Lt~ 377 (433)
T PRK04922 344 SPDGKKIAMVHGS-GGQYRIAVMDLSTGSVRTLTP 377 (433)
T ss_pred CCCCCEEEEEECC-CCceeEEEEECCCCCeEECCC
Confidence 9999999887542 223479999998888887764
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.3e-13 Score=130.29 Aligned_cols=155 Identities=12% Similarity=0.111 Sum_probs=123.5
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
...+|++.|- +|-..+.++........|.|||||+.|+|.+.+.+...++|+++++++ ...++....+..
T Consensus 171 ~~~~l~~~D~---dg~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g--~~~~i~~~~g~~----- 240 (425)
T COG0823 171 LPYELALGDY---DGYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTG--KRPVILNFNGNN----- 240 (425)
T ss_pred CCceEEEEcc---CCcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCC--ccceeeccCCcc-----
Confidence 4558999998 777888899888888899999999999999877662379999999988 556666666655
Q ss_pred CCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccc
Q 011049 96 GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEED 175 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~ 175 (494)
..|. |||||++|+|...+ .....||++|+.++...+|+...+. +..++
T Consensus 241 ~~P~--fspDG~~l~f~~~r------------------dg~~~iy~~dl~~~~~~~Lt~~~gi------------~~~Ps 288 (425)
T COG0823 241 GAPA--FSPDGSKLAFSSSR------------------DGSPDIYLMDLDGKNLPRLTNGFGI------------NTSPS 288 (425)
T ss_pred CCcc--CCCCCCEEEEEECC------------------CCCccEEEEcCCCCcceecccCCcc------------ccCcc
Confidence 5566 99999999999842 2344699999999988787776653 23679
Q ss_pred ccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecCC
Q 011049 176 INLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFP 213 (494)
Q Consensus 176 ~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~~ 213 (494)
|+|||++++|....... ++||++++++++.+++|...
T Consensus 289 ~spdG~~ivf~Sdr~G~-p~I~~~~~~g~~~~riT~~~ 325 (425)
T COG0823 289 WSPDGSKIVFTSDRGGR-PQIYLYDLEGSQVTRLTFSG 325 (425)
T ss_pred CCCCCCEEEEEeCCCCC-cceEEECCCCCceeEeeccC
Confidence 99999999998655444 48999999999888887543
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.55 E-value=9.4e-14 Score=131.12 Aligned_cols=213 Identities=16% Similarity=0.121 Sum_probs=123.3
Q ss_pred EEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC
Q 011049 228 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 307 (494)
Q Consensus 228 ~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~ 307 (494)
.+...||.++.+...-++ + .+.||++||++... . . ......+...+|.|+++|.+
T Consensus 8 ~~~~~~~~~l~y~~~g~~------~--~~~lvllHG~~~~~-----------~-~----~~~~~~~~~~~~~vi~~D~~- 62 (306)
T TIGR01249 8 YLNVSDNHQLYYEQSGNP------D--GKPVVFLHGGPGSG-----------T-D----PGCRRFFDPETYRIVLFDQR- 62 (306)
T ss_pred eEEcCCCcEEEEEECcCC------C--CCEEEEECCCCCCC-----------C-C----HHHHhccCccCCEEEEECCC-
Confidence 445567877776553221 1 24578899975211 0 0 01112334578999996654
Q ss_pred CCCCCCCCCCch----hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCC-
Q 011049 308 IIGEGDKLPNDR----FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT- 382 (494)
Q Consensus 308 ~~g~g~~~~~~~----~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~- 382 (494)
|+|.+..... ...+...|+...++.+ +.+++.++||||||++++.++.++|++++++|..++.....
T Consensus 63 --G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l------~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 134 (306)
T TIGR01249 63 --GCGKSTPHACLEENTTWDLVADIEKLREKL------GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREK 134 (306)
T ss_pred --CCCCCCCCCCcccCCHHHHHHHHHHHHHHc------CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHH
Confidence 5665543221 1233444444433332 23679999999999999999999999998888766432100
Q ss_pred ------------CC---------C--CCcc-------------ccc-------ccc---ccc----------------HH
Q 011049 383 ------------LT---------P--FGFQ-------------TEF-------RTL---WEA----------------TN 400 (494)
Q Consensus 383 ------------~~---------~--~~~~-------------~~~-------~~~---~~~----------------~~ 400 (494)
.. . .... ... ... |.. +.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (306)
T TIGR01249 135 EWSWFYEGGASMIYPDAWQRFMDSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFK 214 (306)
T ss_pred HHHHHHhcchhhhCHHHHHHHhhhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchH
Confidence 00 0 0000 000 000 000 00
Q ss_pred ---HHHh-----------cC----ccccccCC-CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCc
Q 011049 401 ---VYIE-----------MS----PITHANKI-KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV 461 (494)
Q Consensus 401 ---~~~~-----------~s----p~~~~~~~-~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 461 (494)
.+.. .+ -...+.++ ++|+|++||++|..+| ...+.++++.+. ..+++++++.||.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~g~~D~~~p--~~~~~~~~~~~~----~~~~~~~~~~gH~ 288 (306)
T TIGR01249 215 FSLAFARLENHYFVNKGFLDVENFILDNISKIRNIPTYIVHGRYDLCCP--LQSAWALHKAFP----EAELKVTNNAGHS 288 (306)
T ss_pred HHHHHHHHHHhHHHHhchhcCchHHHHhhhhccCCCeEEEecCCCCCCC--HHHHHHHHHhCC----CCEEEEECCCCCC
Confidence 0000 00 01234556 5899999999999998 888877777654 3688999999998
Q ss_pred cCCcccHHHHHHHHHHHHHHhc
Q 011049 462 YAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 462 ~~~~~~~~~~~~~~~~fl~~~l 483 (494)
...+ ...+++.+|+..+|
T Consensus 289 ~~~~----~~~~~i~~~~~~~~ 306 (306)
T TIGR01249 289 AFDP----NNLAALVHALETYL 306 (306)
T ss_pred CCCh----HHHHHHHHHHHHhC
Confidence 7532 45677777777654
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.8e-13 Score=128.64 Aligned_cols=185 Identities=17% Similarity=0.073 Sum_probs=119.9
Q ss_pred hhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC
Q 011049 288 TSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 367 (494)
Q Consensus 288 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~ 367 (494)
..+..|+++||.|+.+|.+ |.|.+.....+.+....|+.++++++.++. ..+++.++|||+||.+++.++..+|+
T Consensus 85 ~~~~~L~~~G~~V~~~D~~---g~g~s~~~~~~~d~~~~~~~~~v~~l~~~~--~~~~i~lvGhS~GG~i~~~~~~~~~~ 159 (350)
T TIGR01836 85 SLVRGLLERGQDVYLIDWG---YPDRADRYLTLDDYINGYIDKCVDYICRTS--KLDQISLLGICQGGTFSLCYAALYPD 159 (350)
T ss_pred hHHHHHHHCCCeEEEEeCC---CCCHHHhcCCHHHHHHHHHHHHHHHHHHHh--CCCcccEEEECHHHHHHHHHHHhCch
Confidence 4566889999999996654 334332222222223355888899998864 24689999999999999999999999
Q ss_pred ceeEEEeCCCCCCCCCCCCC-------------------cccc-----------ccccc----------ccHH---HHH-
Q 011049 368 LFCCGIARSGSYNKTLTPFG-------------------FQTE-----------FRTLW----------EATN---VYI- 403 (494)
Q Consensus 368 ~~~a~v~~~~~~~~~~~~~~-------------------~~~~-----------~~~~~----------~~~~---~~~- 403 (494)
+++++|+.++..+....... +... ....| .+++ .|.
T Consensus 160 ~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (350)
T TIGR01836 160 KIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLR 239 (350)
T ss_pred heeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHH
Confidence 99999998887653211000 0000 00000 0110 000
Q ss_pred -----hcC-c-----------------------------cccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCC
Q 011049 404 -----EMS-P-----------------------------ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGA 448 (494)
Q Consensus 404 -----~~s-p-----------------------------~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~ 448 (494)
... + ...+.++++|+|+++|++|..+| +..+..+++.+.. .
T Consensus 240 ~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~--~~~~~~~~~~~~~--~ 315 (350)
T TIGR01836 240 MEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYAERDHLVP--PDASKALNDLVSS--E 315 (350)
T ss_pred HHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEecCCCCcCC--HHHHHHHHHHcCC--C
Confidence 000 0 01245678999999999999988 8888888887654 4
Q ss_pred cEEEEEcCCCCCcc-CC-cccHHHHHHHHHHHHHHh
Q 011049 449 LSRLVLLPFEHHVY-AA-RENVMHVIWETDRWLQKY 482 (494)
Q Consensus 449 ~~~~~~~~~~~H~~-~~-~~~~~~~~~~~~~fl~~~ 482 (494)
+.++.++++ +|.. .. .......+..+.+||.++
T Consensus 316 ~~~~~~~~~-gH~~~~~~~~~~~~v~~~i~~wl~~~ 350 (350)
T TIGR01836 316 DYTELSFPG-GHIGIYVSGKAQKEVPPAIGKWLQAR 350 (350)
T ss_pred CeEEEEcCC-CCEEEEECchhHhhhhHHHHHHHHhC
Confidence 568888885 6653 32 233578889999999763
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.8e-13 Score=112.08 Aligned_cols=201 Identities=18% Similarity=0.250 Sum_probs=129.9
Q ss_pred EEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCC
Q 011049 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 304 (494)
Q Consensus 225 ~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 304 (494)
..+.+...-| ++.+. +.|.+ ....|+.|.+|..|- ..|+.+ .......+..|..+||+++.+|
T Consensus 5 ~~v~i~Gp~G-~le~~-~~~~~-----~~~~~iAli~HPHPl--------~gGtm~--nkvv~~la~~l~~~G~atlRfN 67 (210)
T COG2945 5 PTVIINGPAG-RLEGR-YEPAK-----TPAAPIALICHPHPL--------FGGTMN--NKVVQTLARALVKRGFATLRFN 67 (210)
T ss_pred CcEEecCCcc-cceec-cCCCC-----CCCCceEEecCCCcc--------ccCccC--CHHHHHHHHHHHhCCceEEeec
Confidence 4455555544 44443 33433 123788998887552 222221 1122234557788999999988
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC
Q 011049 305 SIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT 384 (494)
Q Consensus 305 ~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~ 384 (494)
+|+..+..+++.+ +-...+|+.++++|+.++.. +..-..+.|+|+|+++++.++.+.|+. ...++..|..+. .
T Consensus 68 fRgVG~S~G~fD~---GiGE~~Da~aaldW~~~~hp-~s~~~~l~GfSFGa~Ia~~la~r~~e~-~~~is~~p~~~~--~ 140 (210)
T COG2945 68 FRGVGRSQGEFDN---GIGELEDAAAALDWLQARHP-DSASCWLAGFSFGAYIAMQLAMRRPEI-LVFISILPPINA--Y 140 (210)
T ss_pred ccccccccCcccC---CcchHHHHHHHHHHHHhhCC-CchhhhhcccchHHHHHHHHHHhcccc-cceeeccCCCCc--h
Confidence 8765444333322 23457899999999998753 323347899999999999999999653 566666666541 0
Q ss_pred CCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCC
Q 011049 385 PFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA 464 (494)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~ 464 (494)
. ..++.....|.++++|+.|..++ .....+..+ +.+.++++.++++|.|..
T Consensus 141 d----------------------fs~l~P~P~~~lvi~g~~Ddvv~--l~~~l~~~~-----~~~~~~i~i~~a~HFF~g 191 (210)
T COG2945 141 D----------------------FSFLAPCPSPGLVIQGDADDVVD--LVAVLKWQE-----SIKITVITIPGADHFFHG 191 (210)
T ss_pred h----------------------hhhccCCCCCceeEecChhhhhc--HHHHHHhhc-----CCCCceEEecCCCceecc
Confidence 0 01233456899999999999886 554433333 366789999999999874
Q ss_pred cccHHHHHHHHHHHHH
Q 011049 465 RENVMHVIWETDRWLQ 480 (494)
Q Consensus 465 ~~~~~~~~~~~~~fl~ 480 (494)
......+.+.+|+.
T Consensus 192 --Kl~~l~~~i~~~l~ 205 (210)
T COG2945 192 --KLIELRDTIADFLE 205 (210)
T ss_pred --cHHHHHHHHHHHhh
Confidence 34466667788874
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.6e-13 Score=128.54 Aligned_cols=195 Identities=18% Similarity=0.181 Sum_probs=114.6
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCc-----hhHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND-----RFVEQLVSSAE 329 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~-----~~~~~~~~d~~ 329 (494)
.|.||++||++.++ ..+ .......+.+.||.|+.++.+ |+|.+.... ...+...+|+.
T Consensus 25 ~~~vl~~hG~~g~~-----------~~~---~~~~~~~l~~~g~~vi~~d~~---G~G~s~~~~~~~~~~~~~~~~~~~~ 87 (288)
T TIGR01250 25 KIKLLLLHGGPGMS-----------HEY---LENLRELLKEEGREVIMYDQL---GCGYSDQPDDSDELWTIDYFVDELE 87 (288)
T ss_pred CCeEEEEcCCCCcc-----------HHH---HHHHHHHHHhcCCEEEEEcCC---CCCCCCCCCcccccccHHHHHHHHH
Confidence 47788899964211 011 111222334459999996665 455443221 11334445544
Q ss_pred HHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC---------CCC--ccc-----ccc
Q 011049 330 AAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT---------PFG--FQT-----EFR 393 (494)
Q Consensus 330 ~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~---------~~~--~~~-----~~~ 393 (494)
+.++.+ +.+++.++|||+||.+++.++..+|++++++|..+++...... ... ... ...
T Consensus 88 ~~~~~~------~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (288)
T TIGR01250 88 EVREKL------GLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCEAS 161 (288)
T ss_pred HHHHHc------CCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHHhc
Confidence 443322 2356999999999999999999999999999987765321000 000 000 000
Q ss_pred cccccH---------------------------------HHH---------------HhcCccccccCCCCCEEEEecCC
Q 011049 394 TLWEAT---------------------------------NVY---------------IEMSPITHANKIKKPILIIHGEV 425 (494)
Q Consensus 394 ~~~~~~---------------------------------~~~---------------~~~sp~~~~~~~~~P~li~~G~~ 425 (494)
..+.+. ..+ ...+....+.++++|+|+++|++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~ 241 (288)
T TIGR01250 162 GDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEF 241 (288)
T ss_pred cCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCC
Confidence 000000 000 00011123457889999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 426 DDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 426 D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
|. ++ +.....+.+.+. ..+++++++++|.... +....+.+.+.+||+
T Consensus 242 D~-~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 242 DT-MT--PEAAREMQELIA----GSRLVVFPDGSHMTMI-EDPEVYFKLLSDFIR 288 (288)
T ss_pred Cc-cC--HHHHHHHHHhcc----CCeEEEeCCCCCCccc-CCHHHHHHHHHHHhC
Confidence 98 44 566666655443 3578899999998764 567788888888873
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.9e-14 Score=116.33 Aligned_cols=214 Identities=19% Similarity=0.206 Sum_probs=139.6
Q ss_pred CceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC----C
Q 011049 234 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI----I 309 (494)
Q Consensus 234 g~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~----~ 309 (494)
+..+..-+|+|+....+++ .|++.++-|- +.+...|..... +.+.-...|++|+.+|..+. .
T Consensus 25 ~c~Mtf~vylPp~a~~~k~--~P~lf~LSGL-----------TCT~~Nfi~Ksg-~qq~As~hgl~vV~PDTSPRG~~v~ 90 (283)
T KOG3101|consen 25 KCSMTFGVYLPPDAPRGKR--CPVLFYLSGL-----------TCTHENFIEKSG-FQQQASKHGLAVVAPDTSPRGVEVA 90 (283)
T ss_pred ccceEEEEecCCCcccCCc--CceEEEecCC-----------cccchhhHhhhh-HHHhHhhcCeEEECCCCCCCccccC
Confidence 4578888999998766665 9999999883 444444543221 12233458999999776432 1
Q ss_pred CCCCCC------------CCchhHH--HHHHHHHH-HHHHHH-HcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEE
Q 011049 310 GEGDKL------------PNDRFVE--QLVSSAEA-AVEEVV-RRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGI 373 (494)
Q Consensus 310 g~g~~~------------~~~~~~~--~~~~d~~~-~v~~l~-~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v 373 (494)
|..+++ ....|.. .+.+-+.. ..+-|. ..-.+|+.+++|.||||||+-|+-+..+.|.+++.+-
T Consensus 91 g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvS 170 (283)
T KOG3101|consen 91 GDDESWDFGQGAGFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVS 170 (283)
T ss_pred CCcccccccCCceeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCccccccee
Confidence 111111 0111211 11111111 112121 1234799999999999999999999999999999999
Q ss_pred eCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCC---CCCEEEEecCCCCCCCCCHHH--HHHHHHHHHhCC-
Q 011049 374 ARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKI---KKPILIIHGEVDDKVGLFPMQ--AERFFDALKGHG- 447 (494)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~---~~P~li~~G~~D~~v~~~~~~--~~~~~~~l~~~g- 447 (494)
+++|+.|....+|+-....+-.-++...|...++...+++. ..-+||-+|+.|...+ .| .+.+.++.+...
T Consensus 171 AFAPI~NP~~cpWGqKAf~gYLG~~ka~W~~yDat~lik~y~~~~~~ilIdqG~~D~Fl~---~qLlPe~l~~a~~~~~~ 247 (283)
T KOG3101|consen 171 AFAPICNPINCPWGQKAFTGYLGDNKAQWEAYDATHLIKNYRGVGDDILIDQGAADNFLA---EQLLPENLLEACKATWQ 247 (283)
T ss_pred ccccccCcccCcchHHHhhcccCCChHHHhhcchHHHHHhcCCCCccEEEecCccchhhh---hhcChHHHHHHhhcccc
Confidence 99999999888887554444444566777777776655554 4559999999998752 22 245555555433
Q ss_pred CcEEEEEcCCCCCccCC
Q 011049 448 ALSRLVLLPFEHHVYAA 464 (494)
Q Consensus 448 ~~~~~~~~~~~~H~~~~ 464 (494)
.++.+..-++-.|.+..
T Consensus 248 ~~v~~r~~~gyDHSYyf 264 (283)
T KOG3101|consen 248 APVVFRLQEGYDHSYYF 264 (283)
T ss_pred ccEEEEeecCCCcceee
Confidence 67888889999998653
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.9e-13 Score=129.15 Aligned_cols=173 Identities=18% Similarity=0.244 Sum_probs=105.1
Q ss_pred hCCeEEEeCCCCCCCCCCCCCCCc--------h-hHHHHHHHHHHHHHHHHHcCCCCCCcEE-EEecChHHHHHHHHHHh
Q 011049 295 ARRFAVLAGPSIPIIGEGDKLPND--------R-FVEQLVSSAEAAVEEVVRRGVADPSRIA-VGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 295 ~~G~~v~~~~~~~~~g~g~~~~~~--------~-~~~~~~~d~~~~v~~l~~~~~~d~~ri~-i~G~S~GG~~a~~~~~~ 364 (494)
+++|.|+++|.+ |+|.+.... . ..++.++|+.+. +.+.- +-+++. |+||||||++++.++.+
T Consensus 103 ~~~~~Via~Dl~---GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~---l~~~l--gi~~~~~lvG~SmGG~vAl~~A~~ 174 (360)
T PRK06489 103 ASKYFIILPDGI---GHGKSSKPSDGLRAAFPRYDYDDMVEAQYRL---VTEGL--GVKHLRLILGTSMGGMHAWMWGEK 174 (360)
T ss_pred ccCCEEEEeCCC---CCCCCCCCCcCCCCCCCcccHHHHHHHHHHH---HHHhc--CCCceeEEEEECHHHHHHHHHHHh
Confidence 678999996655 555553221 1 123333333332 32321 225664 89999999999999999
Q ss_pred CCCceeEEEeCCCCCCCC------C-----------CCC---Cccc-c-c---------------------cccc-cc--
Q 011049 365 APHLFCCGIARSGSYNKT------L-----------TPF---GFQT-E-F---------------------RTLW-EA-- 398 (494)
Q Consensus 365 ~p~~~~a~v~~~~~~~~~------~-----------~~~---~~~~-~-~---------------------~~~~-~~-- 398 (494)
+|++++++|++++..... . ..+ .+.. . . .... ..
T Consensus 175 ~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (360)
T PRK06489 175 YPDFMDALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAAD 254 (360)
T ss_pred CchhhheeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHH
Confidence 999999999876542100 0 000 0000 0 0 0000 00
Q ss_pred --------------HHHHH-------hcCccccccCCCCCEEEEecCCCCCCCCCHHHH--HHHHHHHHhCCCcEEEEEc
Q 011049 399 --------------TNVYI-------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQA--ERFFDALKGHGALSRLVLL 455 (494)
Q Consensus 399 --------------~~~~~-------~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~--~~~~~~l~~~g~~~~~~~~ 455 (494)
...+. ..+....+.++++|+|+++|++|..+| +..+ +.+.+.+. ..+++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p--~~~~~~~~la~~ip----~a~l~~i 328 (360)
T PRK06489 255 KLVDERLAAPVTADANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNP--PETGVMEAALKRVK----HGRLVLI 328 (360)
T ss_pred HHHHHHHHhhhhcCHHHHHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccC--hhhHHHHHHHHhCc----CCeEEEE
Confidence 00110 112223466789999999999999987 6654 45555543 3689999
Q ss_pred CCC----CCccCCcccHHHHHHHHHHHHHHhc
Q 011049 456 PFE----HHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 456 ~~~----~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
+++ ||... +..+.+.+.+.+||+++-
T Consensus 329 ~~a~~~~GH~~~--e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 329 PASPETRGHGTT--GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred CCCCCCCCcccc--cCHHHHHHHHHHHHHhcc
Confidence 996 99874 578888899999998653
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.4e-13 Score=134.18 Aligned_cols=149 Identities=15% Similarity=0.137 Sum_probs=112.6
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
...||++|. +|..++.||.+......|+|||||+.|+|.+..++ ..+||+.++.++ +.++++...+.. .
T Consensus 183 ~~~i~i~d~---dg~~~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~-~~~i~i~dl~tg--~~~~l~~~~g~~-----~ 251 (429)
T PRK01742 183 PYEVRVADY---DGFNQFIVNRSSQPLMSPAWSPDGSKLAYVSFENK-KSQLVVHDLRSG--ARKVVASFRGHN-----G 251 (429)
T ss_pred eEEEEEECC---CCCCceEeccCCCccccceEcCCCCEEEEEEecCC-CcEEEEEeCCCC--ceEEEecCCCcc-----C
Confidence 368999999 88888889988877889999999999999987554 678999999887 777777655433 3
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.+. |||||++|++.... .....||++|+++++.++++..... ...+.|
T Consensus 252 ~~~--wSPDG~~La~~~~~------------------~g~~~Iy~~d~~~~~~~~lt~~~~~------------~~~~~w 299 (429)
T PRK01742 252 APA--FSPDGSRLAFASSK------------------DGVLNIYVMGANGGTPSQLTSGAGN------------NTEPSW 299 (429)
T ss_pred cee--ECCCCCEEEEEEec------------------CCcEEEEEEECCCCCeEeeccCCCC------------cCCEEE
Confidence 344 99999999997631 1123599999999888777654321 234689
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEe
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQI 209 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~l 209 (494)
+|||+.+++... ....++||.++..++..+.+
T Consensus 300 SpDG~~i~f~s~-~~g~~~I~~~~~~~~~~~~l 331 (429)
T PRK01742 300 SPDGQSILFTSD-RSGSPQVYRMSASGGGASLV 331 (429)
T ss_pred CCCCCEEEEEEC-CCCCceEEEEECCCCCeEEe
Confidence 999999888654 33446899998877665554
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.54 E-value=7.2e-13 Score=116.43 Aligned_cols=231 Identities=18% Similarity=0.170 Sum_probs=139.7
Q ss_pred EEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCC
Q 011049 227 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI 306 (494)
Q Consensus 227 ~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~ 306 (494)
.++. .+|.+.+++||.|++...+ .|+||++||+..+ ..++.+.+ .|+ ......||.|+.++..
T Consensus 38 ~s~~-~~g~~r~y~l~vP~g~~~~----apLvv~LHG~~~s---gag~~~~s--g~d-------~lAd~~gFlV~yPdg~ 100 (312)
T COG3509 38 ASFD-VNGLKRSYRLYVPPGLPSG----APLVVVLHGSGGS---GAGQLHGT--GWD-------ALADREGFLVAYPDGY 100 (312)
T ss_pred cccc-cCCCccceEEEcCCCCCCC----CCEEEEEecCCCC---hHHhhccc--chh-------hhhcccCcEEECcCcc
Confidence 3444 4678999999999986432 4999999997522 22222211 121 1224589999996543
Q ss_pred CCCC----CCCCCCCc--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC-
Q 011049 307 PIIG----EGDKLPND--RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY- 379 (494)
Q Consensus 307 ~~~g----~g~~~~~~--~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~- 379 (494)
+..- .+..+... .-.-+.+..+.+++..|+.+..||+.||+|.|.|.||.|+..+++.+|++|.++..+++..
T Consensus 101 ~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~~ 180 (312)
T COG3509 101 DRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLLA 180 (312)
T ss_pred ccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeecccC
Confidence 3211 11111111 1123557788899999999999999999999999999999999999999999999888864
Q ss_pred CCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHH---------------
Q 011049 380 NKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALK--------------- 444 (494)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~--------------- 444 (494)
+-.... ... +-.-...--..+|..--..=..| |.+|..|..|+ ..+..+..+.+-
T Consensus 181 ~~~a~~----~~r--p~~~m~~~G~~Dp~~p~~gG~~~--~g~g~~~~~v~--~~~~~~~Waa~ng~~~~p~~~~~~~~~ 250 (312)
T COG3509 181 LGVACT----PPR--PVSVMAFHGTADPLNPYHGGGVP--IGRGQRDGVVS--AADLAARWAAVNGCQAGPDTAELPDVG 250 (312)
T ss_pred CCcccC----CCC--chhHHHhcCCCCCCCCCCCCCcc--ccccccccccc--HHHHHHHHHHhcCCCCCCcccccCCCc
Confidence 211000 000 00000000011221111111123 77788887765 455444444442
Q ss_pred --------hCCCcEEEEEcCCCCCccCCcccH-----------HHHHHHHHHHHHHhcC
Q 011049 445 --------GHGALSRLVLLPFEHHVYAARENV-----------MHVIWETDRWLQKYCL 484 (494)
Q Consensus 445 --------~~g~~~~~~~~~~~~H~~~~~~~~-----------~~~~~~~~~fl~~~l~ 484 (494)
+.+.++++..+.+.||.+...... .+.-++|.+||..|-.
T Consensus 251 ~~~~~~~~~~~~~V~~y~i~g~GH~wp~~~~~~~~~~g~~t~~~dat~~iw~Ff~~~~R 309 (312)
T COG3509 251 DGTDYDTCDGNARVELYTIDGGGHTWPGGTQYGPAALGMSTRGFDATERIWRFFRQHRR 309 (312)
T ss_pred ccceeeccCCCcceEEEEEeCCcccCcCCCCCCcccccccccCcchHHHHHHHHHhccc
Confidence 122357889999999987532211 2456788999987743
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.5e-12 Score=116.54 Aligned_cols=208 Identities=13% Similarity=0.065 Sum_probs=128.2
Q ss_pred EEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCC
Q 011049 226 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPS 305 (494)
Q Consensus 226 ~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~ 305 (494)
.+.+++..| .+.++++.|.+ ..+.|+||++||.+.. ...+.......+..|+++||.|+.+|+
T Consensus 2 ~~~l~~~~g-~~~~~~~~p~~-----~~~~~~VlllHG~g~~-----------~~~~~~~~~~la~~La~~Gy~Vl~~Dl 64 (266)
T TIGR03101 2 PFFLDAPHG-FRFCLYHPPVA-----VGPRGVVIYLPPFAEE-----------MNKSRRMVALQARAFAAGGFGVLQIDL 64 (266)
T ss_pred CEEecCCCC-cEEEEEecCCC-----CCCceEEEEECCCccc-----------ccchhHHHHHHHHHHHHCCCEEEEECC
Confidence 355666666 46687887765 2236899999985311 011111112235577889999999666
Q ss_pred CCCCCCCCCCC--CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC
Q 011049 306 IPIIGEGDKLP--NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL 383 (494)
Q Consensus 306 ~~~~g~g~~~~--~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~ 383 (494)
+ |+|.+.. .........+|+..+++++.+.+ ..+++++|+|+||.+++.++.++|+.++++|+.+|+.+-..
T Consensus 65 ~---G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~ 138 (266)
T TIGR03101 65 Y---GCGDSAGDFAAARWDVWKEDVAAAYRWLIEQG---HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQ 138 (266)
T ss_pred C---CCCCCCCccccCCHHHHHHHHHHHHHHHHhcC---CCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHH
Confidence 5 4554422 12223566789999999998764 36899999999999999999999999999999999765211
Q ss_pred CCCC---------------------ccccc-cc------ccc----cHHHHHhcCccccccCCCCCEEEEecCCCCCCCC
Q 011049 384 TPFG---------------------FQTEF-RT------LWE----ATNVYIEMSPITHANKIKKPILIIHGEVDDKVGL 431 (494)
Q Consensus 384 ~~~~---------------------~~~~~-~~------~~~----~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~ 431 (494)
.... ..... .. -+. ....+...+....... ..++|++.-+-+.--+
T Consensus 139 ~l~~~lrl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~-~~~~~~~~~~~~~~~~- 216 (266)
T TIGR03101 139 QLQQFLRLRLVARRLGGESAEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPK-NCPVHWFEVRPEEGAT- 216 (266)
T ss_pred HHHHHHHHHHHHHhccccccccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCC-CCceEEEEeccccCCC-
Confidence 0000 00000 00 000 0111222221111111 4567777664322111
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEcCCC
Q 011049 432 FPMQAERFFDALKGHGALSRLVLLPFE 458 (494)
Q Consensus 432 ~~~~~~~~~~~l~~~g~~~~~~~~~~~ 458 (494)
.......+.+++++.|+.++...|++.
T Consensus 217 ~~~~~~~l~~~~~~~g~~v~~~~~~~~ 243 (266)
T TIGR03101 217 LSPVFSRLGEQWVQSGVEVTVDLVPGP 243 (266)
T ss_pred CCHHHHHHHHHHHHcCCeEeeeecCCc
Confidence 145677999999999999999999997
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.4e-13 Score=123.96 Aligned_cols=189 Identities=15% Similarity=0.100 Sum_probs=113.6
Q ss_pred cEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 011049 256 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEV 335 (494)
Q Consensus 256 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l 335 (494)
|.||++||.+. +...|. ..... ...+|.|++++.+ |+|.+...... ++...++.+
T Consensus 5 ~~iv~~HG~~~-----------~~~~~~----~~~~~-l~~~~~vi~~d~~---G~G~s~~~~~~------~~~~~~~~~ 59 (245)
T TIGR01738 5 VHLVLIHGWGM-----------NAEVFR----CLDEE-LSAHFTLHLVDLP---GHGRSRGFGPL------SLADAAEAI 59 (245)
T ss_pred ceEEEEcCCCC-----------chhhHH----HHHHh-hccCeEEEEecCC---cCccCCCCCCc------CHHHHHHHH
Confidence 78999999642 111121 12223 3467999996654 55554322111 122223333
Q ss_pred HHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC-CCC--Ccc------------ccc--------
Q 011049 336 VRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL-TPF--GFQ------------TEF-------- 392 (494)
Q Consensus 336 ~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~-~~~--~~~------------~~~-------- 392 (494)
.+.. .+++.++|||+||++++.++.++|++++++|++++...... ..+ ... ...
T Consensus 60 ~~~~---~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (245)
T TIGR01738 60 AAQA---PDPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFL 136 (245)
T ss_pred HHhC---CCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHH
Confidence 3322 26899999999999999999999999999998765432100 000 000 000
Q ss_pred -----ccccccH-----------------H-------HHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHH
Q 011049 393 -----RTLWEAT-----------------N-------VYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDAL 443 (494)
Q Consensus 393 -----~~~~~~~-----------------~-------~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l 443 (494)
....... . .+...+....+.++++|+|+++|++|..+| ....+.+.+.+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~--~~~~~~~~~~~ 214 (245)
T TIGR01738 137 ALQTLGTPTARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVP--AKVVPYLDKLA 214 (245)
T ss_pred HHHHhcCCccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccC--HHHHHHHHHhC
Confidence 0000000 0 001111223456889999999999999987 77766665554
Q ss_pred HhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 444 KGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 444 ~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
. ++++.+++++||.... +....+.+.+.+|+
T Consensus 215 ~----~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fi 245 (245)
T TIGR01738 215 P----HSELYIFAKAAHAPFL-SHAEAFCALLVAFK 245 (245)
T ss_pred C----CCeEEEeCCCCCCccc-cCHHHHHHHHHhhC
Confidence 3 4688999999998764 67778888888874
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.1e-13 Score=130.85 Aligned_cols=192 Identities=17% Similarity=0.093 Sum_probs=113.6
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCC--CchhHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP--NDRFVEQLVSSAEAAV 332 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~--~~~~~~~~~~d~~~~v 332 (494)
.|.||++||.+. +...|. ... ..+.++|.|+.++.+ |+|.+.. .........+++...+
T Consensus 131 ~~~vl~~HG~~~-----------~~~~~~----~~~-~~l~~~~~v~~~d~~---g~G~s~~~~~~~~~~~~~~~~~~~~ 191 (371)
T PRK14875 131 GTPVVLIHGFGG-----------DLNNWL----FNH-AALAAGRPVIALDLP---GHGASSKAVGAGSLDELAAAVLAFL 191 (371)
T ss_pred CCeEEEECCCCC-----------ccchHH----HHH-HHHhcCCEEEEEcCC---CCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 578999998541 111121 122 234466999996654 4554421 2222334444443333
Q ss_pred HHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcc----c----c-------------
Q 011049 333 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQ----T----E------------- 391 (494)
Q Consensus 333 ~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~----~----~------------- 391 (494)
+. ++..++.++|||+||++++.++..+|++++++|+.+|..........+. . .
T Consensus 192 ----~~--~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (371)
T PRK14875 192 ----DA--LGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADP 265 (371)
T ss_pred ----Hh--cCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcCh
Confidence 32 3457899999999999999999999999999998877532110000000 0 0
Q ss_pred cccccc------------c-HHHHH------------hcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhC
Q 011049 392 FRTLWE------------A-TNVYI------------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGH 446 (494)
Q Consensus 392 ~~~~~~------------~-~~~~~------------~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~ 446 (494)
....+. . ...+. ..+....+.++++|+|+++|++|..+| +.++..+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp--~~~~~~l~------ 337 (371)
T PRK14875 266 ALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIP--AAHAQGLP------ 337 (371)
T ss_pred hhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccC--HHHHhhcc------
Confidence 000000 0 00000 011222456789999999999999987 76654332
Q ss_pred CCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 447 GALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 447 g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
..+++.+++++||.... +....+.+.+.+||++
T Consensus 338 -~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 338 -DGVAVHVLPGAGHMPQM-EAAADVNRLLAEFLGK 370 (371)
T ss_pred -CCCeEEEeCCCCCChhh-hCHHHHHHHHHHHhcc
Confidence 24688999999998663 5666777777788764
|
|
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.52 E-value=9.2e-14 Score=116.57 Aligned_cols=166 Identities=20% Similarity=0.269 Sum_probs=122.9
Q ss_pred hhHHHHHhCCeEEEeCCCCCCCCCC---CCCCCchhH-----HHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHH
Q 011049 288 TSSLIFLARRFAVLAGPSIPIIGEG---DKLPNDRFV-----EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTA 359 (494)
Q Consensus 288 ~~~~~l~~~G~~v~~~~~~~~~g~g---~~~~~~~~~-----~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~ 359 (494)
..+..++..||.|+.||.+...-.. .......|. +....|+...++||..++ ++.+|+++|+++||-.+.
T Consensus 58 ~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g--~~kkIGv~GfCwGak~vv 135 (242)
T KOG3043|consen 58 EGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHG--DSKKIGVVGFCWGAKVVV 135 (242)
T ss_pred HHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcC--CcceeeEEEEeecceEEE
Confidence 3455778899999998875321111 111112222 234678899999999776 468999999999999999
Q ss_pred HHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHH
Q 011049 360 HLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERF 439 (494)
Q Consensus 360 ~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~ 439 (494)
.+....| .|.++++..|..- | ...+.++++|+|++.++.|..+| +....++
T Consensus 136 ~~~~~~~-~f~a~v~~hps~~-------------------------d-~~D~~~vk~Pilfl~ae~D~~~p--~~~v~~~ 186 (242)
T KOG3043|consen 136 TLSAKDP-EFDAGVSFHPSFV-------------------------D-SADIANVKAPILFLFAELDEDVP--PKDVKAW 186 (242)
T ss_pred Eeeccch-hheeeeEecCCcC-------------------------C-hhHHhcCCCCEEEEeecccccCC--HHHHHHH
Confidence 8888875 8999998888421 1 23456788999999999999998 8888888
Q ss_pred HHHHHhCC-CcEEEEEcCCCCCccCC-------cc---cHHHHHHHHHHHHHHhcC
Q 011049 440 FDALKGHG-ALSRLVLLPFEHHVYAA-------RE---NVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 440 ~~~l~~~g-~~~~~~~~~~~~H~~~~-------~~---~~~~~~~~~~~fl~~~l~ 484 (494)
-++|++.. ...++.+|++.+|+|.. ++ ..+..++.++.||.+++.
T Consensus 187 ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~~ 242 (242)
T KOG3043|consen 187 EEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYLA 242 (242)
T ss_pred HHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhhC
Confidence 88888753 23579999999999863 11 224678899999999874
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.2e-12 Score=113.58 Aligned_cols=177 Identities=11% Similarity=0.030 Sum_probs=105.0
Q ss_pred cEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh--CCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 011049 256 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA--RRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVE 333 (494)
Q Consensus 256 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~ 333 (494)
|.||++||.+ +++..|.. ......+.+ .+|.|++++-+ |++ .+ +.+.+.
T Consensus 2 p~illlHGf~-----------ss~~~~~~--~~~~~~l~~~~~~~~v~~~dl~---g~~---------~~----~~~~l~ 52 (190)
T PRK11071 2 STLLYLHGFN-----------SSPRSAKA--TLLKNWLAQHHPDIEMIVPQLP---PYP---------AD----AAELLE 52 (190)
T ss_pred CeEEEECCCC-----------CCcchHHH--HHHHHHHHHhCCCCeEEeCCCC---CCH---------HH----HHHHHH
Confidence 6799999954 22222211 011223444 37999885553 331 22 233344
Q ss_pred HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC-----CCCccccccccccc-HH---HHHh
Q 011049 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT-----PFGFQTEFRTLWEA-TN---VYIE 404 (494)
Q Consensus 334 ~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~---~~~~ 404 (494)
.+.++. +.+++.++|+|+||++++.++.++|. + +|.++|..+.... ...........+.. .+ ....
T Consensus 53 ~l~~~~--~~~~~~lvG~S~Gg~~a~~~a~~~~~--~-~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 127 (190)
T PRK11071 53 SLVLEH--GGDPLGLVGSSLGGYYATWLSQCFML--P-AVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLKV 127 (190)
T ss_pred HHHHHc--CCCCeEEEEECHHHHHHHHHHHHcCC--C-EEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHHh
Confidence 444432 23689999999999999999999983 3 4667776552000 00000000001111 11 1222
Q ss_pred cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 405 MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 405 ~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
..+.. +. ...|++++||++|..|| +..+.++++. +++.+++|++|.+... +.+.+.+.+|+.
T Consensus 128 ~~~~~-i~-~~~~v~iihg~~De~V~--~~~a~~~~~~-------~~~~~~~ggdH~f~~~---~~~~~~i~~fl~ 189 (190)
T PRK11071 128 MQIDP-LE-SPDLIWLLQQTGDEVLD--YRQAVAYYAA-------CRQTVEEGGNHAFVGF---ERYFNQIVDFLG 189 (190)
T ss_pred cCCcc-CC-ChhhEEEEEeCCCCcCC--HHHHHHHHHh-------cceEEECCCCcchhhH---HHhHHHHHHHhc
Confidence 22222 22 56788999999999998 9999988884 3566779999998543 677888888874
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.6e-13 Score=128.76 Aligned_cols=217 Identities=20% Similarity=0.240 Sum_probs=142.0
Q ss_pred cccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 222 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 222 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
+....+.++.+||++|...+|+|++ .++.|+++..+-.|+.... +... ...........|+.+||+|+
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~-----~g~~Pvll~~~~~Py~k~~------~~~~-~~~~~~p~~~~~aa~GYavV 84 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAG-----AGPLPVLLSRTRLPYRKRN------GTFG-PQLSALPQPAWFAAQGYAVV 84 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCC-----CCCCceeEEeecccccccc------ccCc-chhhcccccceeecCceEEE
Confidence 4456788899999999999999997 3559999998844433221 0000 00000011126799999999
Q ss_pred eCCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCC
Q 011049 302 AGPSIPIIGEGDKLPND-RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 380 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~~-~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~ 380 (494)
..|.||. +.++... .+..+..+|-.+.|+|+.++++.+ .+|+++|.||+|+..+++|+..|.-.||++..++..|
T Consensus 85 ~qDvRG~---~~SeG~~~~~~~~E~~Dg~D~I~Wia~QpWsN-G~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 85 NQDVRGR---GGSEGVFDPESSREAEDGYDTIEWLAKQPWSN-GNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred Eeccccc---ccCCcccceeccccccchhHHHHHHHhCCccC-CeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 9666654 4443321 122246788899999999999876 7899999999999999999999888999999888766
Q ss_pred CCCC--------------CCCc-----------cc-----------------------cccccccc--------H-HHHH
Q 011049 381 KTLT--------------PFGF-----------QT-----------------------EFRTLWEA--------T-NVYI 403 (494)
Q Consensus 381 ~~~~--------------~~~~-----------~~-----------------------~~~~~~~~--------~-~~~~ 403 (494)
.... .|.. .. ....+|.. . ..|.
T Consensus 161 ~y~d~~~~~G~~~~~~~~~W~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~~~~~~hp~~ddfW~ 240 (563)
T COG2936 161 RYRDDAFYGGGAELNFNLGWALTMLAPQPLTRIRPARLDRLAPLRVGAERWRDAPTELLEGEPYFLELWLEHPLRDDFWR 240 (563)
T ss_pred ccccccccCcchhhhhhHHHHhhhcccCcccccccccccccchhhhhhccccccccchhccCcccchhhhcCCCccchhh
Confidence 2100 0000 00 00011110 0 1233
Q ss_pred hcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCc
Q 011049 404 EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV 461 (494)
Q Consensus 404 ~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 461 (494)
+.+-....+++++|+|.+.|-.|.. ...+.+++..++.. +..+++-|- .|.
T Consensus 241 ~~~~~~d~~~i~vP~L~i~gW~D~~----l~~~~~~~~~~~~r--~~~lvvgPw-~H~ 291 (563)
T COG2936 241 RGDRVADLSKIKVPALVIGGWSDGY----LHTAIKLFAFLRSR--PVKLVVGPW-THG 291 (563)
T ss_pred ccCcccccccCCCcEEEEccccccc----ccchHHHhhhcccC--CceeEEccc-ccC
Confidence 3455566788999999999999975 34566788888775 344555443 454
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.6e-12 Score=116.38 Aligned_cols=232 Identities=18% Similarity=0.174 Sum_probs=141.4
Q ss_pred EEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCC
Q 011049 226 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPS 305 (494)
Q Consensus 226 ~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~ 305 (494)
...++..||..+......++. ..+ .|+||.+||-. |+. .+.+.......+.++||.|++.+.
T Consensus 51 re~v~~pdg~~~~ldw~~~p~---~~~--~P~vVl~HGL~-----------G~s--~s~y~r~L~~~~~~rg~~~Vv~~~ 112 (345)
T COG0429 51 RERLETPDGGFIDLDWSEDPR---AAK--KPLVVLFHGLE-----------GSS--NSPYARGLMRALSRRGWLVVVFHF 112 (345)
T ss_pred eEEEEcCCCCEEEEeeccCcc---ccC--CceEEEEeccC-----------CCC--cCHHHHHHHHHHHhcCCeEEEEec
Confidence 335566787666666665432 112 69999999942 322 112223344566789999999777
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHH-HHHHHHHHhCCC-ceeEEEeCCCCCCCCC
Q 011049 306 IPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGA-FMTAHLLAHAPH-LFCCGIARSGSYNKTL 383 (494)
Q Consensus 306 ~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG-~~a~~~~~~~p~-~~~a~v~~~~~~~~~~ 383 (494)
|+..|.-... ..-+.....+|+..+++++.++.. +.++..+|.|+|| +++.+++...-+ ...|+++++..+|...
T Consensus 113 Rgcs~~~n~~-p~~yh~G~t~D~~~~l~~l~~~~~--~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~ 189 (345)
T COG0429 113 RGCSGEANTS-PRLYHSGETEDIRFFLDWLKARFP--PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEA 189 (345)
T ss_pred ccccCCcccC-cceecccchhHHHHHHHHHHHhCC--CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHH
Confidence 7654432221 122233346899999999998764 5789999999999 555555544322 3455555554333100
Q ss_pred ------CCCC--c------------------------c-------ccccccc--------------ccHHHHHhcCcccc
Q 011049 384 ------TPFG--F------------------------Q-------TEFRTLW--------------EATNVYIEMSPITH 410 (494)
Q Consensus 384 ------~~~~--~------------------------~-------~~~~~~~--------------~~~~~~~~~sp~~~ 410 (494)
..+. + . ...++.| +..+.|.+.|.+..
T Consensus 190 ~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~ 269 (345)
T COG0429 190 CAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPL 269 (345)
T ss_pred HHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhcccccc
Confidence 0000 0 0 0001111 12356788899999
Q ss_pred ccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHh-CCCcEEEEEcCCCCCc-cCC-cc-cHH-HHHHHHHHHHHHhcC
Q 011049 411 ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG-HGALSRLVLLPFEHHV-YAA-RE-NVM-HVIWETDRWLQKYCL 484 (494)
Q Consensus 411 ~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~H~-~~~-~~-~~~-~~~~~~~~fl~~~l~ 484 (494)
+.+|.+|+||||..+|+.++ ... .-.++. .+..+.+.+-+..||. +.. .. +.. -.-+++.+||+..+.
T Consensus 270 L~~Ir~PtLii~A~DDP~~~--~~~----iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 270 LPKIRKPTLIINAKDDPFMP--PEV----IPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred ccccccceEEEecCCCCCCC--hhh----CCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 99999999999999999986 322 222222 4567899999999996 322 22 122 233468999998765
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.6e-13 Score=122.22 Aligned_cols=190 Identities=12% Similarity=0.053 Sum_probs=112.6
Q ss_pred cEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 011049 256 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEV 335 (494)
Q Consensus 256 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l 335 (494)
|.||++||.+.+ ...|. .....| +..|.|+++|.+ |+|.+.....+ ..++ .++.+
T Consensus 14 ~~ivllHG~~~~-----------~~~w~----~~~~~L-~~~~~vi~~Dl~---G~G~S~~~~~~---~~~~---~~~~l 68 (256)
T PRK10349 14 VHLVLLHGWGLN-----------AEVWR----CIDEEL-SSHFTLHLVDLP---GFGRSRGFGAL---SLAD---MAEAV 68 (256)
T ss_pred CeEEEECCCCCC-----------hhHHH----HHHHHH-hcCCEEEEecCC---CCCCCCCCCCC---CHHH---HHHHH
Confidence 569999996521 11221 223344 456999995554 55555322211 1122 22233
Q ss_pred HHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCC--C-CCCCCc-----------cccccc---cc--
Q 011049 336 VRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK--T-LTPFGF-----------QTEFRT---LW-- 396 (494)
Q Consensus 336 ~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~--~-~~~~~~-----------~~~~~~---~~-- 396 (494)
.+.. .+++.++|||+||++++.++.++|++++.+|.+++.... . ...... ...... .+
T Consensus 69 ~~~~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (256)
T PRK10349 69 LQQA---PDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLA 145 (256)
T ss_pred HhcC---CCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHH
Confidence 3332 378999999999999999999999999999987653211 0 000000 000000 00
Q ss_pred ------c--c-----------------H-------HHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 011049 397 ------E--A-----------------T-------NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALK 444 (494)
Q Consensus 397 ------~--~-----------------~-------~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~ 444 (494)
. . . ..+...+....+.++++|+|+++|++|..+| ...+..+.+.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~i- 222 (256)
T PRK10349 146 LQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVP--RKVVPMLDKLW- 222 (256)
T ss_pred HHHccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCC--HHHHHHHHHhC-
Confidence 0 0 0 0011122233466789999999999999987 66555444444
Q ss_pred hCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 445 GHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 445 ~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
...++.+++++||.... +....+.+.+.+|-.
T Consensus 223 ---~~~~~~~i~~~gH~~~~-e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 223 ---PHSESYIFAKAAHAPFI-SHPAEFCHLLVALKQ 254 (256)
T ss_pred ---CCCeEEEeCCCCCCccc-cCHHHHHHHHHHHhc
Confidence 34689999999998774 777788888777643
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.1e-12 Score=118.63 Aligned_cols=196 Identities=14% Similarity=0.092 Sum_probs=111.6
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 334 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~ 334 (494)
.|.||++||.+.. ...|. ... ....++|.|+++|.+ |+|.+...... ....++..+.+..
T Consensus 34 ~~~iv~lHG~~~~-----------~~~~~----~~~-~~l~~~~~vi~~D~~---G~G~S~~~~~~-~~~~~~~~~~~~~ 93 (286)
T PRK03204 34 GPPILLCHGNPTW-----------SFLYR----DII-VALRDRFRCVAPDYL---GFGLSERPSGF-GYQIDEHARVIGE 93 (286)
T ss_pred CCEEEEECCCCcc-----------HHHHH----HHH-HHHhCCcEEEEECCC---CCCCCCCCCcc-ccCHHHHHHHHHH
Confidence 4779999996411 01121 122 234567999996654 55655332211 1113344444444
Q ss_pred HHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCC-CC----------CCC-----c-----ccc--
Q 011049 335 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT-LT----------PFG-----F-----QTE-- 391 (494)
Q Consensus 335 l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~-~~----------~~~-----~-----~~~-- 391 (494)
+++.. +.+++.++|||+||.++..++..+|++++++|..++..-.. .. ... + ...
T Consensus 94 ~~~~~--~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (286)
T PRK03204 94 FVDHL--GLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERLI 171 (286)
T ss_pred HHHHh--CCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhhhhHHHHHhc
Confidence 44432 34679999999999999999999999999999776542100 00 000 0 000
Q ss_pred ---cccccc--cHHHHHh--------------------cCc-ccc----cc--CCCCCEEEEecCCCCCCCCCHH-HHHH
Q 011049 392 ---FRTLWE--ATNVYIE--------------------MSP-ITH----AN--KIKKPILIIHGEVDDKVGLFPM-QAER 438 (494)
Q Consensus 392 ---~~~~~~--~~~~~~~--------------------~sp-~~~----~~--~~~~P~li~~G~~D~~v~~~~~-~~~~ 438 (494)
...... ....+.. ..+ +.. +. .+++|+|+++|++|..++ +. ..+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~--~~~~~~~ 249 (286)
T PRK03204 172 PAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFR--PKTILPR 249 (286)
T ss_pred cccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccC--cHHHHHH
Confidence 000000 0000000 000 000 11 127999999999999875 44 3344
Q ss_pred HHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 439 FFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 439 ~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
+.+.+. ..++++++++||... .+..+.+.+.+.+||
T Consensus 250 ~~~~ip----~~~~~~i~~aGH~~~-~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 250 LRATFP----DHVLVELPNAKHFIQ-EDAPDRIAAAIIERF 285 (286)
T ss_pred HHHhcC----CCeEEEcCCCccccc-ccCHHHHHHHHHHhc
Confidence 444443 368899999999977 477888888888886
|
|
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.3e-12 Score=123.92 Aligned_cols=70 Identities=17% Similarity=0.066 Sum_probs=59.3
Q ss_pred cccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcC-CCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 410 HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLP-FEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 410 ~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~-~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
.+.+|++|+|+++|+.|..+| +..++++.+.+...+..+++++++ ++||.... +....+.+.+.+||.+.
T Consensus 304 ~l~~I~~PtLvI~G~~D~~~p--~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~l-e~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 304 ALARIKARFLVVSFTSDWLFP--PARSREIVDALLAAGADVSYAEIDSPYGHDAFL-LDDPRYGRLVRAFLERA 374 (379)
T ss_pred HHhcCCCCEEEEEECCccccC--HHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHh-cCHHHHHHHHHHHHHhh
Confidence 346789999999999999987 999999999998877777888775 89998764 66678888999999875
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.5e-12 Score=123.84 Aligned_cols=169 Identities=21% Similarity=0.192 Sum_probs=105.4
Q ss_pred hCCeEEEeCCCCCCCCCCCCCCCc--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEE
Q 011049 295 ARRFAVLAGPSIPIIGEGDKLPND--RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCG 372 (494)
Q Consensus 295 ~~G~~v~~~~~~~~~g~g~~~~~~--~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~ 372 (494)
+++|.|+++|.+ |+|.+.... .......+|+.+.++.+. .+++.++|||+||++++.++.++|++++++
T Consensus 110 ~~~~~v~~~D~~---G~G~S~~~~~~~~~~~~a~~l~~~i~~~~------~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~l 180 (354)
T PLN02578 110 AKKYKVYALDLL---GFGWSDKALIEYDAMVWRDQVADFVKEVV------KEPAVLVGNSLGGFTALSTAVGYPELVAGV 180 (354)
T ss_pred hcCCEEEEECCC---CCCCCCCcccccCHHHHHHHHHHHHHHhc------cCCeEEEEECHHHHHHHHHHHhChHhcceE
Confidence 467999996665 455543321 122334455555555442 367999999999999999999999999999
Q ss_pred EeCCCCCCCCCCC----CC-----------cccc----------------cc----------ccccc-------------
Q 011049 373 IARSGSYNKTLTP----FG-----------FQTE----------------FR----------TLWEA------------- 398 (494)
Q Consensus 373 v~~~~~~~~~~~~----~~-----------~~~~----------------~~----------~~~~~------------- 398 (494)
|++++........ .. +... .. ..+.+
T Consensus 181 vLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (354)
T PLN02578 181 ALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESIT 260 (354)
T ss_pred EEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHH
Confidence 9876542110000 00 0000 00 00000
Q ss_pred --------HHHHH-----------hcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCC
Q 011049 399 --------TNVYI-----------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEH 459 (494)
Q Consensus 399 --------~~~~~-----------~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 459 (494)
.+.+. ..+....+.++++|+|+++|++|..+| ...+.++.+.+. +.+++++ ++|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~--~~~~~~l~~~~p----~a~l~~i-~~G 333 (354)
T PLN02578 261 EPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVG--PAKAEKIKAFYP----DTTLVNL-QAG 333 (354)
T ss_pred hcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCC--HHHHHHHHHhCC----CCEEEEe-CCC
Confidence 00000 011122356789999999999999987 777776666553 3567777 589
Q ss_pred CccCCcccHHHHHHHHHHHHH
Q 011049 460 HVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 460 H~~~~~~~~~~~~~~~~~fl~ 480 (494)
|... .+....+.+.+.+|+.
T Consensus 334 H~~~-~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 334 HCPH-DEVPEQVNKALLEWLS 353 (354)
T ss_pred CCcc-ccCHHHHHHHHHHHHh
Confidence 9876 4777788889999985
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.47 E-value=9.3e-14 Score=124.94 Aligned_cols=175 Identities=22% Similarity=0.279 Sum_probs=109.1
Q ss_pred EEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC----chhHHHHHHHHHHHHH
Q 011049 258 LFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN----DRFVEQLVSSAEAAVE 333 (494)
Q Consensus 258 vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~----~~~~~~~~~d~~~~v~ 333 (494)
||++||.+.+ ...|. .....| ++||.|++++.+ |+|.+... ....++.++|+.++++
T Consensus 1 vv~~hG~~~~-----------~~~~~----~~~~~l-~~~~~v~~~d~~---G~G~s~~~~~~~~~~~~~~~~~l~~~l~ 61 (228)
T PF12697_consen 1 VVFLHGFGGS-----------SESWD----PLAEAL-ARGYRVIAFDLP---GHGRSDPPPDYSPYSIEDYAEDLAELLD 61 (228)
T ss_dssp EEEE-STTTT-----------GGGGH----HHHHHH-HTTSEEEEEECT---TSTTSSSHSSGSGGSHHHHHHHHHHHHH
T ss_pred eEEECCCCCC-----------HHHHH----HHHHHH-hCCCEEEEEecC---CccccccccccCCcchhhhhhhhhhccc
Confidence 7899997521 11222 244455 589999996654 55555432 2223455566555554
Q ss_pred HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC--C---C-ccc--------------ccc
Q 011049 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP--F---G-FQT--------------EFR 393 (494)
Q Consensus 334 ~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~--~---~-~~~--------------~~~ 393 (494)
.+ + .+++.++|||+||.+++.++.++|++++++|..+|........ . . +.. ...
T Consensus 62 ~~---~---~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (228)
T PF12697_consen 62 AL---G---IKKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFF 135 (228)
T ss_dssp HT---T---TSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc---c---cccccccccccccccccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccccc
Confidence 43 2 2689999999999999999999999999999999876421100 0 0 000 000
Q ss_pred cccccH-----------HH--------HHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEE
Q 011049 394 TLWEAT-----------NV--------YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVL 454 (494)
Q Consensus 394 ~~~~~~-----------~~--------~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~ 454 (494)
..+... +. +...+....+.++++|+++++|++|..++ ....+++.+.+ .++++++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~--~~~~~~~~~~~----~~~~~~~ 209 (228)
T PF12697_consen 136 YRWFDGDEPEDLIRSSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVP--PESAEELADKL----PNAELVV 209 (228)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSH--HHHHHHHHHHS----TTEEEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccCCCeEEeecCCCCCCC--HHHHHHHHHHC----CCCEEEE
Confidence 000000 00 11223345667789999999999999986 55555555444 4589999
Q ss_pred cCCCCCccC
Q 011049 455 LPFEHHVYA 463 (494)
Q Consensus 455 ~~~~~H~~~ 463 (494)
+++++|.+.
T Consensus 210 ~~~~gH~~~ 218 (228)
T PF12697_consen 210 IPGAGHFLF 218 (228)
T ss_dssp ETTSSSTHH
T ss_pred ECCCCCccH
Confidence 999999865
|
... |
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.5e-12 Score=125.17 Aligned_cols=142 Identities=7% Similarity=0.081 Sum_probs=106.1
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
.+||++++ .++++++++..+.....|+|||||++|+|.+..++ ..+||+++++++ +.++++...... ..
T Consensus 228 ~~i~i~dl---~tg~~~~l~~~~g~~~~~~wSPDG~~La~~~~~~g-~~~Iy~~d~~~~--~~~~lt~~~~~~-----~~ 296 (429)
T PRK01742 228 SQLVVHDL---RSGARKVVASFRGHNGAPAFSPDGSRLAFASSKDG-VLNIYVMGANGG--TPSQLTSGAGNN-----TE 296 (429)
T ss_pred cEEEEEeC---CCCceEEEecCCCccCceeECCCCCEEEEEEecCC-cEEEEEEECCCC--CeEeeccCCCCc-----CC
Confidence 47999999 88888888877666678999999999999876655 578999999887 778888755433 44
Q ss_pred CceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccccc
Q 011049 98 PMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDIN 177 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s 177 (494)
|. |||||++|+|.+.. ...++||.++..++..+++ ...+ ....||
T Consensus 297 ~~--wSpDG~~i~f~s~~------------------~g~~~I~~~~~~~~~~~~l-~~~~--------------~~~~~S 341 (429)
T PRK01742 297 PS--WSPDGQSILFTSDR------------------SGSPQVYRMSASGGGASLV-GGRG--------------YSAQIS 341 (429)
T ss_pred EE--ECCCCCEEEEEECC------------------CCCceEEEEECCCCCeEEe-cCCC--------------CCccCC
Confidence 55 99999999998631 1234699999888766554 1111 124799
Q ss_pred ccCcEEEEEEecCCCCCeEEEEEcCCCceeEee
Q 011049 178 LNQLKILTSKESKTEITQYHILSWPLKKSSQIT 210 (494)
Q Consensus 178 ~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt 210 (494)
|||+.+++... ..++.+++.+++.+.++
T Consensus 342 pDG~~ia~~~~-----~~i~~~Dl~~g~~~~lt 369 (429)
T PRK01742 342 ADGKTLVMING-----DNVVKQDLTSGSTEVLS 369 (429)
T ss_pred CCCCEEEEEcC-----CCEEEEECCCCCeEEec
Confidence 99998887643 35788898888777665
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.9e-14 Score=129.95 Aligned_cols=215 Identities=23% Similarity=0.295 Sum_probs=124.3
Q ss_pred CceEEEEEEeCCCCCCCCCCCCcEEEEecCC-CcCCcccCCcccCCCCccCCCCchhHHHHHhCC----eEEEeCCCCCC
Q 011049 234 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPE-DYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR----FAVLAGPSIPI 308 (494)
Q Consensus 234 g~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G----~~v~~~~~~~~ 308 (494)
|..+..++|+|++|++.+ ++|+|+++||. .+.. .+. .......++..| .+++.++..+.
T Consensus 5 g~~~~~~VylP~~y~~~~--~~PvlylldG~~~~~~------------~~~--~~~~~~~~~~~~~~~~~iiV~i~~~~~ 68 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYDPSK--PYPVLYLLDGQSGWFR------------NGN--AQEALDRLIAEGKIPPMIIVVIPNGDN 68 (251)
T ss_dssp TEEEEEEEEECTTGGTTT--TEEEEEEESHTTHHHH------------HHH--HHHHHHHHHHHHTSEEEEEEEEESSST
T ss_pred CCeEEEEEEECCCCCCCC--CCEEEEEccCCccccc------------cch--HHHHHHHHHHhCCCCceEEEEEecccc
Confidence 678999999999985544 49999999992 2100 000 001122334443 33333222121
Q ss_pred C-CCCC-------------CCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEe
Q 011049 309 I-GEGD-------------KLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIA 374 (494)
Q Consensus 309 ~-g~g~-------------~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~ 374 (494)
. .++. ......+.....+ +.+.++.++..+++++.+|+|+|+||+.|+.++.++|+.|.++++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~ 145 (251)
T PF00756_consen 69 SRFYTSWYLPAGSSRRADDSGGGDAYETFLTE---ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIA 145 (251)
T ss_dssp SSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHT---HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEE
T ss_pred cccccccccccccccccccCCCCcccceehhc---cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccc
Confidence 1 0000 0011222333333 445667777767777799999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcccccccccccHHHHHhcCccccc-----cCCCCCEEEEecCCCCCCCC--------CHHHHHHHHH
Q 011049 375 RSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHA-----NKIKKPILIIHGEVDDKVGL--------FPMQAERFFD 441 (494)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~-----~~~~~P~li~~G~~D~~v~~--------~~~~~~~~~~ 441 (494)
++|..+.....|.- ...+.|...++...+ ..-..++++.+|+.|....- ......++.+
T Consensus 146 ~S~~~~~~~~~w~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~~ 217 (251)
T PF00756_consen 146 FSGALDPSPSLWGP--------SDDEAWKENDPFDLIKALSQKKKPLRIYLDVGTKDEFGGWEDSAQILQFLANNRELAQ 217 (251)
T ss_dssp ESEESETTHCHHHH--------STCGHHGGCHHHHHHHHHHHTTSEEEEEEEEETTSTTHHCSHHHHHHHHHHHHHHHHH
T ss_pred cCccccccccccCc--------CCcHHhhhccHHHHhhhhhcccCCCeEEEEeCCCCcccccccCHHHHHHHHHhHhhHH
Confidence 99976543111110 011222233333322 22347789999999983210 0123445555
Q ss_pred HHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 442 ALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 442 ~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
.|+.++.+..+..+++ +|.+. .+...+...+.||
T Consensus 218 ~l~~~g~~~~~~~~~G-~H~~~---~W~~~l~~~L~~~ 251 (251)
T PF00756_consen 218 LLKAKGIPHTYHVFPG-GHDWA---YWRRRLPDALPWM 251 (251)
T ss_dssp HCCCEECTTESEEEHS-ESSHH---HHHHHHHHHHHHH
T ss_pred HHHHcCCCceEEEecC-ccchh---hHHHHHHHHHhhC
Confidence 5666778888889985 67643 2445555556654
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.47 E-value=8.3e-13 Score=126.76 Aligned_cols=68 Identities=13% Similarity=-0.017 Sum_probs=54.1
Q ss_pred cccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCC-CCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 410 HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPF-EHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 410 ~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~-~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
.+.++++|+|+++|++|..+| +..++.+.+.+.+ .+++++++ +||.... +....+...+.+||.+.+.
T Consensus 270 ~L~~I~~PtLvI~G~~D~~~p--~~~~~~l~~~ip~----a~l~~i~~~~GH~~~~-~~~~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 270 ALGSITAKTFVMPISTDLYFP--PEDCEAEAALIPN----AELRPIESIWGHLAGF-GQNPADIAFIDAALKELLA 338 (339)
T ss_pred HHhcCCCCEEEEEeCCCCCCC--HHHHHHHHHhCCC----CeEEEeCCCCCccccc-cCcHHHHHHHHHHHHHHHh
Confidence 355688999999999999987 7877777666533 58889998 8997653 5666788889999988764
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=9.6e-13 Score=126.28 Aligned_cols=175 Identities=17% Similarity=0.111 Sum_probs=110.5
Q ss_pred HHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCc-EEEEecChHHHHHHHHHHhCCCceeE
Q 011049 293 FLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSR-IAVGGHSYGAFMTAHLLAHAPHLFCC 371 (494)
Q Consensus 293 l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~r-i~i~G~S~GG~~a~~~~~~~p~~~~a 371 (494)
|...+|.|+++|.+| +|.+..........++|+.+.++.+ + + ++ +.++||||||++++.++.++|++++.
T Consensus 95 L~~~~~~Vi~~Dl~G---~g~s~~~~~~~~~~a~dl~~ll~~l---~-l--~~~~~lvG~SmGG~vA~~~A~~~P~~V~~ 165 (343)
T PRK08775 95 LDPARFRLLAFDFIG---ADGSLDVPIDTADQADAIALLLDAL---G-I--ARLHAFVGYSYGALVGLQFASRHPARVRT 165 (343)
T ss_pred cCccccEEEEEeCCC---CCCCCCCCCCHHHHHHHHHHHHHHc---C-C--CcceEEEEECHHHHHHHHHHHHChHhhhe
Confidence 335689999977664 4444322222345566766665554 3 2 34 57999999999999999999999999
Q ss_pred EEeCCCCCCCCCCC--CC------------------------------ccc--------cccccc------ccHH-----
Q 011049 372 GIARSGSYNKTLTP--FG------------------------------FQT--------EFRTLW------EATN----- 400 (494)
Q Consensus 372 ~v~~~~~~~~~~~~--~~------------------------------~~~--------~~~~~~------~~~~----- 400 (494)
+|++++........ +. +.. .....+ ....
T Consensus 166 LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 245 (343)
T PRK08775 166 LVVVSGAHRAHPYAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDA 245 (343)
T ss_pred EEEECccccCCHHHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHH
Confidence 99887653210000 00 000 000000 0000
Q ss_pred ----HHHhcCc-------------cccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCC-CCCcc
Q 011049 401 ----VYIEMSP-------------ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPF-EHHVY 462 (494)
Q Consensus 401 ----~~~~~sp-------------~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~-~~H~~ 462 (494)
.....++ ...+.++++|+|+++|+.|..+| +..+.++.+.+. ...++.++++ +||..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p--~~~~~~~~~~i~---p~a~l~~i~~~aGH~~ 320 (343)
T PRK08775 246 AGAQYVARTPVNAYLRLSESIDLHRVDPEAIRVPTVVVAVEGDRLVP--LADLVELAEGLG---PRGSLRVLRSPYGHDA 320 (343)
T ss_pred HHHHHHHhcChhHHHHHHHHHhhcCCChhcCCCCeEEEEeCCCEeeC--HHHHHHHHHHcC---CCCeEEEEeCCccHHH
Confidence 0000000 11246788999999999999987 787777776663 2368899985 89987
Q ss_pred CCcccHHHHHHHHHHHHHHh
Q 011049 463 AARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 463 ~~~~~~~~~~~~~~~fl~~~ 482 (494)
.. +..+.+.+.+.+||.+.
T Consensus 321 ~l-E~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 321 FL-KETDRIDAILTTALRST 339 (343)
T ss_pred Hh-cCHHHHHHHHHHHHHhc
Confidence 64 67788888999999753
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.2e-12 Score=124.17 Aligned_cols=68 Identities=19% Similarity=0.106 Sum_probs=53.9
Q ss_pred cccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEE-cCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 410 HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVL-LPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 410 ~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~-~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
.+.++++|+|+++|++|..+| +..++++.+.+.+....++++. ++++||.... +..+.+.+.+.+||+
T Consensus 283 ~l~~I~~P~Lvi~G~~D~~~p--~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~l-e~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 283 ALSRIKAPFLVVSITSDWLFP--PAESRELAKALPAAGLRVTYVEIESPYGHDAFL-VETDQVEELIRGFLR 351 (351)
T ss_pred HHhhCCCCEEEEEeCCccccC--HHHHHHHHHHHhhcCCceEEEEeCCCCCcchhh-cCHHHHHHHHHHHhC
Confidence 456788999999999999988 8999999999987654444444 5689998764 667788888888873
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.1e-11 Score=118.91 Aligned_cols=193 Identities=15% Similarity=0.126 Sum_probs=119.2
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCc------hhHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND------RFVEQLVSSA 328 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~------~~~~~~~~d~ 328 (494)
.|.||++||.+.+. ..|. .....| +.+|.|+++|. .|+|.+.... ...+..++|+
T Consensus 127 ~~~ivllHG~~~~~-----------~~w~----~~~~~L-~~~~~Via~Dl---pG~G~S~~p~~~~~~~ys~~~~a~~l 187 (383)
T PLN03084 127 NPPVLLIHGFPSQA-----------YSYR----KVLPVL-SKNYHAIAFDW---LGFGFSDKPQPGYGFNYTLDEYVSSL 187 (383)
T ss_pred CCeEEEECCCCCCH-----------HHHH----HHHHHH-hcCCEEEEECC---CCCCCCCCCcccccccCCHHHHHHHH
Confidence 47899999965211 1122 223344 46899999555 4566553321 1345556666
Q ss_pred HHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC--CCCC-----------------cc
Q 011049 329 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL--TPFG-----------------FQ 389 (494)
Q Consensus 329 ~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~--~~~~-----------------~~ 389 (494)
.+.++.+ + .+++.++|+|+||.+++.++.++|++++.+|++++...... .+.. +.
T Consensus 188 ~~~i~~l---~---~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~ 261 (383)
T PLN03084 188 ESLIDEL---K---SDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLR 261 (383)
T ss_pred HHHHHHh---C---CCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHH
Confidence 6666554 2 35799999999999999999999999999999887642100 0000 00
Q ss_pred -------c--------cc----cccccc----H----HHHHhc-Ccc-------c---cccCCCCCEEEEecCCCCCCCC
Q 011049 390 -------T--------EF----RTLWEA----T----NVYIEM-SPI-------T---HANKIKKPILIIHGEVDDKVGL 431 (494)
Q Consensus 390 -------~--------~~----~~~~~~----~----~~~~~~-sp~-------~---~~~~~~~P~li~~G~~D~~v~~ 431 (494)
. +. ..++.. . ..+... ..+ . ...++++|+|+++|+.|..++
T Consensus 262 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~- 340 (383)
T PLN03084 262 ASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLN- 340 (383)
T ss_pred HHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcC-
Confidence 0 00 000000 0 000000 000 0 013578999999999999987
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 432 FPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 432 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
....+++.+.. +.++.++++++|.+.. +..+.+.+.+.+||.
T Consensus 341 -~~~~~~~a~~~-----~a~l~vIp~aGH~~~~-E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 341 -YDGVEDFCKSS-----QHKLIELPMAGHHVQE-DCGEELGGIISGILS 382 (383)
T ss_pred -HHHHHHHHHhc-----CCeEEEECCCCCCcch-hCHHHHHHHHHHHhh
Confidence 76665555532 4688999999998774 777888888888875
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.8e-11 Score=121.32 Aligned_cols=151 Identities=13% Similarity=0.145 Sum_probs=111.6
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
..+||++|. +++.+++|+........|+|||||+.|+|.+..++ ..+||++++.++ ..+.++...+.. .
T Consensus 169 ~~~l~~~d~---~g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~-~~~i~v~d~~~g--~~~~~~~~~~~~-----~ 237 (417)
T TIGR02800 169 RYELQVADY---DGANPQTITRSREPILSPAWSPDGQKLAYVSFESG-KPEIYVQDLATG--QREKVASFPGMN-----G 237 (417)
T ss_pred cceEEEEcC---CCCCCEEeecCCCceecccCCCCCCEEEEEEcCCC-CcEEEEEECCCC--CEEEeecCCCCc-----c
Confidence 447999998 88889999987766778999999999999986654 578999999887 666666544332 2
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.+. |||||++|+|.... .....||.+|+.+++.+++....+. ...+.|
T Consensus 238 ~~~--~spDg~~l~~~~~~------------------~~~~~i~~~d~~~~~~~~l~~~~~~------------~~~~~~ 285 (417)
T TIGR02800 238 APA--FSPDGSKLAVSLSK------------------DGNPDIYVMDLDGKQLTRLTNGPGI------------DTEPSW 285 (417)
T ss_pred ceE--ECCCCCEEEEEECC------------------CCCccEEEEECCCCCEEECCCCCCC------------CCCEEE
Confidence 333 99999999997631 1223599999999887776543321 123578
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
++||+++++..... ..+++|.+++.+++.++++.
T Consensus 286 s~dg~~l~~~s~~~-g~~~iy~~d~~~~~~~~l~~ 319 (417)
T TIGR02800 286 SPDGKSIAFTSDRG-GSPQIYMMDADGGEVRRLTF 319 (417)
T ss_pred CCCCCEEEEEECCC-CCceEEEEECCCCCEEEeec
Confidence 99999988865433 34589999998888777764
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.7e-11 Score=114.18 Aligned_cols=241 Identities=15% Similarity=0.089 Sum_probs=149.7
Q ss_pred cccEEEEEEcCCCceEEEEEEeCCCCCC-CCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEE
Q 011049 222 LQKEMIKYQRKDGVPLTATLYLPPGYDQ-SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 300 (494)
Q Consensus 222 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~-~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 300 (494)
+..++.-++..||-.+....+.+.+... .+.+..|+||++||-..++ ...+..........+||.+
T Consensus 91 ~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S-------------~~~YVr~lv~~a~~~G~r~ 157 (409)
T KOG1838|consen 91 VEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGS-------------HESYVRHLVHEAQRKGYRV 157 (409)
T ss_pred CcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCC-------------hhHHHHHHHHHHHhCCcEE
Confidence 3445555666799899998887765321 1124479999999953211 2222334455667799999
Q ss_pred EeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC--ceeEEEeCCCC
Q 011049 301 LAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH--LFCCGIARSGS 378 (494)
Q Consensus 301 ~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~--~~~a~v~~~~~ 378 (494)
+..|.||..|.--... .-+.....+|+..+++++.++.- ..++..+|.|+||.+...+++...+ .+.|+++++-.
T Consensus 158 VVfN~RG~~g~~LtTp-r~f~ag~t~Dl~~~v~~i~~~~P--~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~P 234 (409)
T KOG1838|consen 158 VVFNHRGLGGSKLTTP-RLFTAGWTEDLREVVNHIKKRYP--QAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNP 234 (409)
T ss_pred EEECCCCCCCCccCCC-ceeecCCHHHHHHHHHHHHHhCC--CCceEEEEecchHHHHHHHhhhccCCCCceeEEEEecc
Confidence 9988877544322211 11222347899999999998753 2579999999999999999887643 34555555544
Q ss_pred CCCCC---------CCCCc--------c--------------------cccc--------------cccccHHHHHhcCc
Q 011049 379 YNKTL---------TPFGF--------Q--------------------TEFR--------------TLWEATNVYIEMSP 407 (494)
Q Consensus 379 ~~~~~---------~~~~~--------~--------------------~~~~--------------~~~~~~~~~~~~sp 407 (494)
+|... ...-+ . ...+ ..-...+.|.+.|+
T Consensus 235 wd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs 314 (409)
T KOG1838|consen 235 WDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASS 314 (409)
T ss_pred chhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcch
Confidence 44110 00000 0 0000 00112356788899
Q ss_pred cccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcc---cHHHHHHH-HHHHHHHhc
Q 011049 408 ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE---NVMHVIWE-TDRWLQKYC 483 (494)
Q Consensus 408 ~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~---~~~~~~~~-~~~fl~~~l 483 (494)
...+++|++|+|+|+..+|+++| .. +.-.-+ . ..+..+-+.+-...||--.... +..-++++ +.+||.+..
T Consensus 315 ~~~v~~I~VP~L~ina~DDPv~p--~~-~ip~~~-~-~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~ 389 (409)
T KOG1838|consen 315 SNYVDKIKVPLLCINAADDPVVP--EE-AIPIDD-I-KSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAI 389 (409)
T ss_pred hhhcccccccEEEEecCCCCCCC--cc-cCCHHH-H-hcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHH
Confidence 99999999999999999999997 32 222222 2 2345677777777889632211 44456666 778876653
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=8.4e-12 Score=113.85 Aligned_cols=188 Identities=14% Similarity=0.086 Sum_probs=110.8
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND-RFVEQLVSSAEAAVE 333 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~-~~~~~~~~d~~~~v~ 333 (494)
.|.||++||.+.+. ..|. .....| .+|.|++++.+ |+|.+.... ...+...+|+.+.++
T Consensus 2 ~p~vvllHG~~~~~-----------~~w~----~~~~~l--~~~~vi~~D~~---G~G~S~~~~~~~~~~~~~~l~~~l~ 61 (242)
T PRK11126 2 LPWLVFLHGLLGSG-----------QDWQ----PVGEAL--PDYPRLYIDLP---GHGGSAAISVDGFADVSRLLSQTLQ 61 (242)
T ss_pred CCEEEEECCCCCCh-----------HHHH----HHHHHc--CCCCEEEecCC---CCCCCCCccccCHHHHHHHHHHHHH
Confidence 37899999975221 1222 223333 47999996654 555553321 123444555555544
Q ss_pred HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC-ceeEEEeCCCCCCCCCC-----------CCC--cccc--------
Q 011049 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-LFCCGIARSGSYNKTLT-----------PFG--FQTE-------- 391 (494)
Q Consensus 334 ~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~-~~~a~v~~~~~~~~~~~-----------~~~--~~~~-------- 391 (494)
.+ + .+++.++|||+||.+++.++.++|+ ++++++..++....... .+. +...
T Consensus 62 ~~---~---~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (242)
T PRK11126 62 SY---N---ILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLAD 135 (242)
T ss_pred Hc---C---CCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHH
Confidence 32 2 3789999999999999999999865 49998887654321000 000 0000
Q ss_pred -------cccccccHHH----------------HHh------cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHH
Q 011049 392 -------FRTLWEATNV----------------YIE------MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDA 442 (494)
Q Consensus 392 -------~~~~~~~~~~----------------~~~------~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~ 442 (494)
.......... +.. .+....+.++++|+++++|++|..+ . .+.+.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~----~---~~~~~ 208 (242)
T PRK11126 136 WYQQPVFASLNAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKF----Q---ALAQQ 208 (242)
T ss_pred HHhcchhhccCccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchH----H---HHHHH
Confidence 0000000000 000 0111245678999999999999853 1 12222
Q ss_pred HHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 443 LKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 443 l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
...++.+++++||.+. .+..+.+.+.+.+||.+
T Consensus 209 -----~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 209 -----LALPLHVIPNAGHNAH-RENPAAFAASLAQILRL 241 (242)
T ss_pred -----hcCeEEEeCCCCCchh-hhChHHHHHHHHHHHhh
Confidence 1468999999999876 47778888889999864
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.5e-11 Score=113.88 Aligned_cols=200 Identities=19% Similarity=0.144 Sum_probs=117.6
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEEeCCCCCCCCCCCC-CCCchhHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDK-LPNDRFVEQLVSSAEAAV 332 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g~~-~~~~~~~~~~~~d~~~~v 332 (494)
.|.||++||-+. +...|..... .|.. .|+.|++.|..| .|+... .....+ .+.+....+
T Consensus 58 ~~pvlllHGF~~-----------~~~~w~~~~~----~L~~~~~~~v~aiDl~G-~g~~s~~~~~~~y---~~~~~v~~i 118 (326)
T KOG1454|consen 58 KPPVLLLHGFGA-----------SSFSWRRVVP----LLSKAKGLRVLAIDLPG-HGYSSPLPRGPLY---TLRELVELI 118 (326)
T ss_pred CCcEEEeccccC-----------CcccHhhhcc----ccccccceEEEEEecCC-CCcCCCCCCCCce---ehhHHHHHH
Confidence 688999999542 2222432222 2222 369899855543 232111 122212 122333333
Q ss_pred H-HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEE---eCCCCCCCCCC------------------------
Q 011049 333 E-EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGI---ARSGSYNKTLT------------------------ 384 (494)
Q Consensus 333 ~-~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v---~~~~~~~~~~~------------------------ 384 (494)
. .+++... .++.++|||+||++++.+|+.+|+.++..+ ...+.......
T Consensus 119 ~~~~~~~~~---~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 195 (326)
T KOG1454|consen 119 RRFVKEVFV---EPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSL 195 (326)
T ss_pred HHHHHhhcC---cceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCcccc
Confidence 3 3333332 459999999999999999999999999999 44443221000
Q ss_pred --CCC-cccc----------c-ccccccH--------------HHH-------H--hcCccccccCCC-CCEEEEecCCC
Q 011049 385 --PFG-FQTE----------F-RTLWEAT--------------NVY-------I--EMSPITHANKIK-KPILIIHGEVD 426 (494)
Q Consensus 385 --~~~-~~~~----------~-~~~~~~~--------------~~~-------~--~~sp~~~~~~~~-~P~li~~G~~D 426 (494)
+.. +... . ...++.. +.+ . +......+.++. +|+|+++|+.|
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D 275 (326)
T KOG1454|consen 196 TEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKD 275 (326)
T ss_pred ccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcC
Confidence 000 0000 0 0000000 000 0 012333456666 99999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 427 DKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 427 ~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
+.+| .+.+..+.+.+ ..+++.+++++||.... +.++.+...+..|+.++.
T Consensus 276 ~~~p--~~~~~~~~~~~----pn~~~~~I~~~gH~~h~-e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 276 QIVP--LELAEELKKKL----PNAELVEIPGAGHLPHL-ERPEEVAALLRSFIARLR 325 (326)
T ss_pred CccC--HHHHHHHHhhC----CCceEEEeCCCCccccc-CCHHHHHHHHHHHHHHhc
Confidence 9998 66555554444 55899999999999885 788899999999998763
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.7e-11 Score=111.13 Aligned_cols=193 Identities=13% Similarity=0.110 Sum_probs=111.1
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC---chhHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~ 331 (494)
.|.||++||.+.. ...|. .....|.++||.|++++.+ |+|.+... ....++..+++.+.
T Consensus 18 ~p~vvliHG~~~~-----------~~~w~----~~~~~L~~~g~~vi~~dl~---g~G~s~~~~~~~~~~~~~~~~l~~~ 79 (273)
T PLN02211 18 PPHFVLIHGISGG-----------SWCWY----KIRCLMENSGYKVTCIDLK---SAGIDQSDADSVTTFDEYNKPLIDF 79 (273)
T ss_pred CCeEEEECCCCCC-----------cCcHH----HHHHHHHhCCCEEEEeccc---CCCCCCCCcccCCCHHHHHHHHHHH
Confidence 5889999996421 11121 2344667789999995554 55543221 12234444444444
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC--C------C--------------CCcc
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL--T------P--------------FGFQ 389 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~--~------~--------------~~~~ 389 (494)
++ +.. ..+++.++||||||.++..++..+|++++++|.+++...... . . +...
T Consensus 80 i~---~l~--~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (273)
T PLN02211 80 LS---SLP--ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLG 154 (273)
T ss_pred HH---hcC--CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccC
Confidence 43 322 136899999999999999999999999999998866321000 0 0 0000
Q ss_pred cc-c-cccc---c---------cH----HHH---Hh---cCccc------cccCC-CCCEEEEecCCCCCCCCCHHHHHH
Q 011049 390 TE-F-RTLW---E---------AT----NVY---IE---MSPIT------HANKI-KKPILIIHGEVDDKVGLFPMQAER 438 (494)
Q Consensus 390 ~~-~-~~~~---~---------~~----~~~---~~---~sp~~------~~~~~-~~P~li~~G~~D~~v~~~~~~~~~ 438 (494)
.. . .... + .+ ..+ .. ...+. ...++ ++|+++|.|++|..+| +...+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip--~~~~~~ 232 (273)
T PLN02211 155 PDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVK--PEQQEA 232 (273)
T ss_pred CCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCC--HHHHHH
Confidence 00 0 0000 0 00 000 00 01111 12244 6899999999999998 887777
Q ss_pred HHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHH
Q 011049 439 FFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRW 478 (494)
Q Consensus 439 ~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f 478 (494)
+.+.+.. .+++.++ +||.... +..+.+...+.+.
T Consensus 233 m~~~~~~----~~~~~l~-~gH~p~l-s~P~~~~~~i~~~ 266 (273)
T PLN02211 233 MIKRWPP----SQVYELE-SDHSPFF-STPFLLFGLLIKA 266 (273)
T ss_pred HHHhCCc----cEEEEEC-CCCCccc-cCHHHHHHHHHHH
Confidence 7766542 3677776 7998653 5555555555544
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.34 E-value=8.9e-11 Score=103.79 Aligned_cols=206 Identities=18% Similarity=0.166 Sum_probs=126.5
Q ss_pred EEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC
Q 011049 238 TATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN 317 (494)
Q Consensus 238 ~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~ 317 (494)
+..++.|.. .+.||+||++||-. ....+ +......+|+.||+|+.++.+...+...
T Consensus 5 ~l~v~~P~~-----~g~yPVv~f~~G~~------------~~~s~---Ys~ll~hvAShGyIVV~~d~~~~~~~~~---- 60 (259)
T PF12740_consen 5 PLLVYYPSS-----AGTYPVVLFLHGFL------------LINSW---YSQLLEHVASHGYIVVAPDLYSIGGPDD---- 60 (259)
T ss_pred CeEEEecCC-----CCCcCEEEEeCCcC------------CCHHH---HHHHHHHHHhCceEEEEecccccCCCCc----
Confidence 456788876 45599999999842 00111 2234568899999999977544333211
Q ss_pred chhHHHHHHHHHHHHHHHHHc--C------CCCCCcEEEEecChHHHHHHHHHHhC-----CCceeEEEeCCCCCCCCCC
Q 011049 318 DRFVEQLVSSAEAAVEEVVRR--G------VADPSRIAVGGHSYGAFMTAHLLAHA-----PHLFCCGIARSGSYNKTLT 384 (494)
Q Consensus 318 ~~~~~~~~~d~~~~v~~l~~~--~------~~d~~ri~i~G~S~GG~~a~~~~~~~-----p~~~~a~v~~~~~~~~~~~ 384 (494)
....+++.+.++|+.+. . .+|-+||+|+|||.||-++..++..+ +.+|++++.+.|+-.....
T Consensus 61 ----~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~ 136 (259)
T PF12740_consen 61 ----TDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKG 136 (259)
T ss_pred ----chhHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccc
Confidence 23466677778887662 1 24778999999999999999999887 4589999999997521110
Q ss_pred CCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCC------CCCHH--HHHHHHHHHHhCCCcEEEEEcC
Q 011049 385 PFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKV------GLFPM--QAERFFDALKGHGALSRLVLLP 456 (494)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v------~~~~~--~~~~~~~~l~~~g~~~~~~~~~ 456 (494)
. .. .+..+. ..| ..-+...|+|++-.+..... +|-+. +-.+|+++++ .+.-.++.+
T Consensus 137 ~---~~-------~P~v~~-~~p--~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~---~p~~~~v~~ 200 (259)
T PF12740_consen 137 S---QT-------EPPVLT-YTP--QSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECK---PPSWHFVAK 200 (259)
T ss_pred c---CC-------CCcccc-Ccc--cccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcC---CCEEEEEeC
Confidence 0 00 000000 001 11124589999887766421 12122 3456777664 556777889
Q ss_pred CCCCccCCccc------------------------HHHHHHHHHHHHHHhcCCCC
Q 011049 457 FEHHVYAAREN------------------------VMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 457 ~~~H~~~~~~~------------------------~~~~~~~~~~fl~~~l~~~~ 487 (494)
+.||.-+.... +......+.+|++.+|.+..
T Consensus 201 ~~GH~d~LDd~~~~~~~~~~~~~~Ck~g~~~~~~~r~f~~g~~vAfl~~~l~g~~ 255 (259)
T PF12740_consen 201 DYGHMDFLDDDTPGYVGLCLFRCLCKNGPDDRDPMRRFVGGIMVAFLNAQLQGDP 255 (259)
T ss_pred CCCchHhhcCCCcchhHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCch
Confidence 99995211111 11223467889999988753
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.33 E-value=3e-11 Score=107.34 Aligned_cols=222 Identities=18% Similarity=0.156 Sum_probs=127.3
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCC----eE
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR----FA 299 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G----~~ 299 (494)
.+.+.+.+.-..+....+|+|+++.+..+ +|++++.||--|.. +.... .....|+..| -+
T Consensus 69 ~~~~~~~~~l~~~~~~vv~lppgy~~~~k--~pvl~~~DG~~~~~-------------~g~i~-~~~dsli~~g~i~pai 132 (299)
T COG2382 69 VEEILYSSELLSERRRVVYLPPGYNPLEK--YPVLYLQDGQDWFR-------------SGRIP-RILDSLIAAGEIPPAI 132 (299)
T ss_pred hhhhhhhhhhccceeEEEEeCCCCCcccc--ccEEEEeccHHHHh-------------cCChH-HHHHHHHHcCCCCCce
Confidence 34445544434577888999999877654 99999999843210 11111 1222445544 44
Q ss_pred EEeCCCCCCCCCCCCC-CCchhHHHHHHHHHHHHHHHHHcCC--CCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCC
Q 011049 300 VLAGPSIPIIGEGDKL-PNDRFVEQLVSSAEAAVEEVVRRGV--ADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARS 376 (494)
Q Consensus 300 v~~~~~~~~~g~g~~~-~~~~~~~~~~~d~~~~v~~l~~~~~--~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~ 376 (494)
++.+++.+..-+..+. .+..+......++ +-++.+..- -++++-+++|.|+||.++++++.++|++|-++++.+
T Consensus 133 ~vgid~~d~~~R~~~~~~n~~~~~~L~~eL---lP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~S 209 (299)
T COG2382 133 LVGIDYIDVKKRREELHCNEAYWRFLAQEL---LPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQS 209 (299)
T ss_pred EEecCCCCHHHHHHHhcccHHHHHHHHHHh---hhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccC
Confidence 5544443321111111 2223333333333 344444322 356788999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcC
Q 011049 377 GSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLP 456 (494)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~ 456 (494)
|.+++...... ..++.. ...+-...+..... +.+..|.++.-+ ....+++++.|++++.++.+..|+
T Consensus 210 ps~~~~~~~~~------~~~~~~---~~l~~~~a~~~~~~-~~l~~g~~~~~~---~~pNr~L~~~L~~~g~~~~yre~~ 276 (299)
T COG2382 210 GSFWWTPLDTQ------PQGEVA---ESLKILHAIGTDER-IVLTTGGEEGDF---LRPNRALAAQLEKKGIPYYYREYP 276 (299)
T ss_pred CccccCccccc------cccchh---hhhhhhhccCccce-EEeecCCccccc---cchhHHHHHHHHhcCCcceeeecC
Confidence 97764321110 001111 11111111222223 333333333322 456789999999999999999999
Q ss_pred CCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 457 FEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 457 ~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
| ||.+. .+...+.++|...++
T Consensus 277 G-gHdw~------~Wr~~l~~~L~~l~~ 297 (299)
T COG2382 277 G-GHDWA------WWRPALAEGLQLLLP 297 (299)
T ss_pred C-CCchh------HhHHHHHHHHHHhhc
Confidence 9 99764 333345566655443
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.4e-10 Score=114.92 Aligned_cols=150 Identities=11% Similarity=0.056 Sum_probs=109.5
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
..||++++ ++++.+.++........|+|||||+.|+|....++ ..+||+++++++ ..++++.....+ ..
T Consensus 214 ~~i~v~d~---~~g~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~-~~~i~~~d~~~~--~~~~l~~~~~~~-----~~ 282 (417)
T TIGR02800 214 PEIYVQDL---ATGQREKVASFPGMNGAPAFSPDGSKLAVSLSKDG-NPDIYVMDLDGK--QLTRLTNGPGID-----TE 282 (417)
T ss_pred cEEEEEEC---CCCCEEEeecCCCCccceEECCCCCEEEEEECCCC-CccEEEEECCCC--CEEECCCCCCCC-----CC
Confidence 47999999 77877777776666667999999999999876555 678999999987 667777654332 34
Q ss_pred CceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccccc
Q 011049 98 PMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDIN 177 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s 177 (494)
|. |+|||++|+|.+.. ...++||++|+++++.+++...... ...+.|+
T Consensus 283 ~~--~s~dg~~l~~~s~~------------------~g~~~iy~~d~~~~~~~~l~~~~~~------------~~~~~~s 330 (417)
T TIGR02800 283 PS--WSPDGKSIAFTSDR------------------GGSPQIYMMDADGGEVRRLTFRGGY------------NASPSWS 330 (417)
T ss_pred EE--ECCCCCEEEEEECC------------------CCCceEEEEECCCCCEEEeecCCCC------------ccCeEEC
Confidence 44 99999999998631 1234699999999887776543221 1234789
Q ss_pred ccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 178 LNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 178 ~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
|||+.++++.... ....++++++.++..+.++.
T Consensus 331 pdg~~i~~~~~~~-~~~~i~~~d~~~~~~~~l~~ 363 (417)
T TIGR02800 331 PDGDLIAFVHREG-GGFNIAVMDLDGGGERVLTD 363 (417)
T ss_pred CCCCEEEEEEccC-CceEEEEEeCCCCCeEEccC
Confidence 9999888876532 23479999988876666553
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.6e-10 Score=104.30 Aligned_cols=177 Identities=15% Similarity=0.080 Sum_probs=107.7
Q ss_pred HHHhCCeEEEeCCCCCCCCCCCCCCCchh--HHHHHHHHHHHH-HHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCc
Q 011049 292 IFLARRFAVLAGPSIPIIGEGDKLPNDRF--VEQLVSSAEAAV-EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL 368 (494)
Q Consensus 292 ~l~~~G~~v~~~~~~~~~g~g~~~~~~~~--~~~~~~d~~~~v-~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~ 368 (494)
.|+. ...|.+ .+..|+|.+....-- .........+.+ +|-++.+. +++.|+|||+|||++..+|.++|++
T Consensus 112 ~La~-~~~vya---iDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L---~KmilvGHSfGGYLaa~YAlKyPer 184 (365)
T KOG4409|consen 112 DLAK-IRNVYA---IDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGL---EKMILVGHSFGGYLAAKYALKYPER 184 (365)
T ss_pred hhhh-cCceEE---ecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCC---cceeEeeccchHHHHHHHHHhChHh
Confidence 3344 778887 455567766432110 011111233334 45566665 6899999999999999999999999
Q ss_pred eeEEEeCCCCCCCCCC---C------CCcc--------ccc-------ccccc------------------cHHHH----
Q 011049 369 FCCGIARSGSYNKTLT---P------FGFQ--------TEF-------RTLWE------------------ATNVY---- 402 (494)
Q Consensus 369 ~~a~v~~~~~~~~~~~---~------~~~~--------~~~-------~~~~~------------------~~~~~---- 402 (494)
++-+|+.+|+.-..-. . ..+. ... ..+|. ..+.+
T Consensus 185 V~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~Y 264 (365)
T KOG4409|consen 185 VEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEY 264 (365)
T ss_pred hceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHH
Confidence 9999999886431100 0 0000 000 00000 00000
Q ss_pred --H---------------------hcCc-cccccCCC--CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcC
Q 011049 403 --I---------------------EMSP-ITHANKIK--KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLP 456 (494)
Q Consensus 403 --~---------------------~~sp-~~~~~~~~--~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~ 456 (494)
. ...| +..+..++ +|+++|+|++|..= .....++...| ....++.+++|
T Consensus 265 iY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWmD---~~~g~~~~~~~--~~~~~~~~~v~ 339 (365)
T KOG4409|consen 265 IYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWMD---KNAGLEVTKSL--MKEYVEIIIVP 339 (365)
T ss_pred HHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCccccc---chhHHHHHHHh--hcccceEEEec
Confidence 0 0111 12233344 99999999999853 56667777766 33558999999
Q ss_pred CCCCccCCcccHHHHHHHHHHHHHH
Q 011049 457 FEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 457 ~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
++||... .++.+.+.+.++.++++
T Consensus 340 ~aGHhvy-lDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 340 GAGHHVY-LDNPEFFNQIVLEECDK 363 (365)
T ss_pred CCCceee-cCCHHHHHHHHHHHHhc
Confidence 9999876 37777888888888765
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.6e-10 Score=106.88 Aligned_cols=191 Identities=24% Similarity=0.229 Sum_probs=120.9
Q ss_pred hHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH-cCCCCCCcEEEEecChHHHHHHHHHHh---
Q 011049 289 SSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVR-RGVADPSRIAVGGHSYGAFMTAHLLAH--- 364 (494)
Q Consensus 289 ~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~-~~~~d~~ri~i~G~S~GG~~a~~~~~~--- 364 (494)
....|+++||+|+++|+.| .|..+.........+-|..++.+.+.. .+.-...+++++|+|.||+.+++++..
T Consensus 18 ~l~~~L~~GyaVv~pDY~G---lg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~ 94 (290)
T PF03583_consen 18 FLAAWLARGYAVVAPDYEG---LGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPS 94 (290)
T ss_pred HHHHHHHCCCEEEecCCCC---CCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHH
Confidence 4457889999999988754 444443333333445555555555544 233234799999999999999888754
Q ss_pred -CCCc---eeEEEeCCCCCCCCC-------CCC----------------Ccc--------ccc-----------------
Q 011049 365 -APHL---FCCGIARSGSYNKTL-------TPF----------------GFQ--------TEF----------------- 392 (494)
Q Consensus 365 -~p~~---~~a~v~~~~~~~~~~-------~~~----------------~~~--------~~~----------------- 392 (494)
.|++ +.++++.+++.|... ... .+. ...
T Consensus 95 YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~c~~~~~~ 174 (290)
T PF03583_consen 95 YAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDARTRCLADIVA 174 (290)
T ss_pred hCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHHHhhhHHHHHH
Confidence 3554 788888887765110 000 000 000
Q ss_pred ----ccc--------------cccH---HHHHhcCc-cccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC-Cc
Q 011049 393 ----RTL--------------WEAT---NVYIEMSP-ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG-AL 449 (494)
Q Consensus 393 ----~~~--------------~~~~---~~~~~~sp-~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g-~~ 449 (494)
... ...+ ..+.+.+. ...-..-+.|++|.||..|..|| +..+.++++.+.++| .+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP--~~~~~~l~~~~c~~G~a~ 252 (290)
T PF03583_consen 175 EYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVP--PADTDALVAKWCAAGGAD 252 (290)
T ss_pred HhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCC--hHHHHHHHHHHHHcCCCC
Confidence 000 0000 01111111 00011225899999999999998 999999999999999 79
Q ss_pred EEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCCCCC
Q 011049 450 SRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNTS 488 (494)
Q Consensus 450 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 488 (494)
++++.++..+|.... .......++||...+.+.+.
T Consensus 253 V~~~~~~~~~H~~~~----~~~~~~a~~Wl~~rf~G~~~ 287 (290)
T PF03583_consen 253 VEYVRYPGGGHLGAA----FASAPDALAWLDDRFAGKPA 287 (290)
T ss_pred EEEEecCCCChhhhh----hcCcHHHHHHHHHHHCCCCC
Confidence 999999999996432 12345678999999988754
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.31 E-value=6.4e-11 Score=109.24 Aligned_cols=147 Identities=20% Similarity=0.203 Sum_probs=104.8
Q ss_pred HHHcCCCCCC--cEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCC---------CCCCCcccccccccccH--HH
Q 011049 335 VVRRGVADPS--RIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT---------LTPFGFQTEFRTLWEAT--NV 401 (494)
Q Consensus 335 l~~~~~~d~~--ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~---------~~~~~~~~~~~~~~~~~--~~ 401 (494)
+.+...++.+ +.+|+||||||+-|+.+|+++|++|+.+.+++|+.+.. ...++-... ...|... ..
T Consensus 141 ~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~~~~-~~~~G~~~~~~ 219 (316)
T COG0627 141 WEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLAMGDPWGGKAF-NAMLGPDSDPA 219 (316)
T ss_pred HHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccccccccccCccH-HHhcCCCcccc
Confidence 3344445553 89999999999999999999999999999999998855 222221111 1122211 24
Q ss_pred HHhcCccccccC--------------CCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCccc
Q 011049 402 YIEMSPITHANK--------------IKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAREN 467 (494)
Q Consensus 402 ~~~~sp~~~~~~--------------~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 467 (494)
+.+.+|...+++ ...++++-+|..|.........++.+.+++++.|.+..+..+++..|.+. .
T Consensus 220 w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~G~Hsw~---~ 296 (316)
T COG0627 220 WQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVRDQPGGDHSWY---F 296 (316)
T ss_pred ccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcCCCceeeeCCCCCcCHH---H
Confidence 566667666653 44778888999998641002337899999999999999999988899864 3
Q ss_pred HHHHHHHHHHHHHHhcCC
Q 011049 468 VMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 468 ~~~~~~~~~~fl~~~l~~ 485 (494)
+...+..++.|+...|..
T Consensus 297 w~~~l~~~~~~~a~~l~~ 314 (316)
T COG0627 297 WASQLADHLPWLAGALGL 314 (316)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 456778889999888764
|
|
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.1e-11 Score=99.61 Aligned_cols=202 Identities=14% Similarity=0.117 Sum_probs=133.0
Q ss_pred cccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 222 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 222 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
.+.|.+.|- ..| .-...++.|.+ . .|+.|++|||+|..++-.. .-........+||+|+
T Consensus 43 ~r~e~l~Yg-~~g-~q~VDIwg~~~-----~--~klfIfIHGGYW~~g~rk~------------clsiv~~a~~~gY~va 101 (270)
T KOG4627|consen 43 IRVEHLRYG-EGG-RQLVDIWGSTN-----Q--AKLFIFIHGGYWQEGDRKM------------CLSIVGPAVRRGYRVA 101 (270)
T ss_pred cchhccccC-CCC-ceEEEEecCCC-----C--ccEEEEEecchhhcCchhc------------ccchhhhhhhcCeEEE
Confidence 356666664 233 55677777754 1 6899999999986543211 1112334578999998
Q ss_pred eCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC-CCceeEEEeCCCCCC
Q 011049 302 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYN 380 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~-p~~~~a~v~~~~~~~ 380 (494)
.+. |+.... ....++.+.++...++|+.+.. -..+.+.+.|||.|+++++.+.++. ..++.+++..+|+++
T Consensus 102 svg------Y~l~~q-~htL~qt~~~~~~gv~filk~~-~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~ 173 (270)
T KOG4627|consen 102 SVG------YNLCPQ-VHTLEQTMTQFTHGVNFILKYT-ENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYD 173 (270)
T ss_pred Eec------cCcCcc-cccHHHHHHHHHHHHHHHHHhc-ccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhh
Confidence 733 333312 2245777889999999998864 2456799999999999999988754 358899999999876
Q ss_pred CCC-CCCCcccccccccccHHHHHhcCcc-ccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCC
Q 011049 381 KTL-TPFGFQTEFRTLWEATNVYIEMSPI-THANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFE 458 (494)
Q Consensus 381 ~~~-~~~~~~~~~~~~~~~~~~~~~~sp~-~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 458 (494)
..- .........+. +.+.-...|+. .....++.|+|++.+++|.--- ++|++.+...+++ ..+..|++.
T Consensus 174 l~EL~~te~g~dlgL---t~~~ae~~Scdl~~~~~v~~~ilVv~~~~espkl--ieQnrdf~~q~~~----a~~~~f~n~ 244 (270)
T KOG4627|consen 174 LRELSNTESGNDLGL---TERNAESVSCDLWEYTDVTVWILVVAAEHESPKL--IEQNRDFADQLRK----ASFTLFKNY 244 (270)
T ss_pred HHHHhCCccccccCc---ccchhhhcCccHHHhcCceeeeeEeeecccCcHH--HHhhhhHHHHhhh----cceeecCCc
Confidence 321 11001010000 01111222332 2345678999999999997643 8899999999987 477889999
Q ss_pred CCc
Q 011049 459 HHV 461 (494)
Q Consensus 459 ~H~ 461 (494)
+|.
T Consensus 245 ~hy 247 (270)
T KOG4627|consen 245 DHY 247 (270)
T ss_pred chh
Confidence 996
|
|
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.3e-11 Score=99.15 Aligned_cols=210 Identities=14% Similarity=0.123 Sum_probs=131.0
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEe
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 302 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 302 (494)
..+.+.++.+.+..+-+.+..-. ..-++|++||- +...+. -.....+..++..||-++.
T Consensus 9 ~~~~ivi~n~~ne~lvg~lh~tg--------s~e~vvlcHGf-----------rS~Kn~--~~~~~vA~~~e~~gis~fR 67 (269)
T KOG4667|consen 9 IAQKIVIPNSRNEKLVGLLHETG--------STEIVVLCHGF-----------RSHKNA--IIMKNVAKALEKEGISAFR 67 (269)
T ss_pred eeeEEEeccCCCchhhcceeccC--------CceEEEEeecc-----------ccccch--HHHHHHHHHHHhcCceEEE
Confidence 35567777777777766544322 24689999983 111110 1112334567789999998
Q ss_pred CCCCCCCCCCCCCCCchh--HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCC
Q 011049 303 GPSIPIIGEGDKLPNDRF--VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 380 (494)
Q Consensus 303 ~~~~~~~g~g~~~~~~~~--~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~ 380 (494)
++..|.|++...-.+ ....++|+..+++++..... .--+|+|||-||.+++..+.++++ ++-+|..+|-++
T Consensus 68 ---fDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr---~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRyd 140 (269)
T KOG4667|consen 68 ---FDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNR---VVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYD 140 (269)
T ss_pred ---EEecCCCCcCCccccCcccchHHHHHHHHHHhccCce---EEEEEEeecCccHHHHHHHHhhcC-chheEEcccccc
Confidence 444566665433222 23456999999999855321 223799999999999999999966 677888888766
Q ss_pred CCCCC------C--------Ccc------cccccccccHHHHHhcCc--cccccCC--CCCEEEEecCCCCCCCCCHHHH
Q 011049 381 KTLTP------F--------GFQ------TEFRTLWEATNVYIEMSP--ITHANKI--KKPILIIHGEVDDKVGLFPMQA 436 (494)
Q Consensus 381 ~~~~~------~--------~~~------~~~~~~~~~~~~~~~~sp--~~~~~~~--~~P~li~~G~~D~~v~~~~~~~ 436 (494)
....- . +|. ......|.....+...+. ...-.+| +||+|-+||..|..|| .+.+
T Consensus 141 l~~~I~eRlg~~~l~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVP--ve~A 218 (269)
T KOG4667|consen 141 LKNGINERLGEDYLERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVP--VEDA 218 (269)
T ss_pred hhcchhhhhcccHHHHHHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceee--chhH
Confidence 32100 0 000 001111211111111111 1111223 5999999999999998 9999
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCccCCcc
Q 011049 437 ERFFDALKGHGALSRLVLLPFEHHVYAARE 466 (494)
Q Consensus 437 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~ 466 (494)
.++++.+.. .++.+++|+.|.+...+
T Consensus 219 kefAk~i~n----H~L~iIEgADHnyt~~q 244 (269)
T KOG4667|consen 219 KEFAKIIPN----HKLEIIEGADHNYTGHQ 244 (269)
T ss_pred HHHHHhccC----CceEEecCCCcCccchh
Confidence 999998876 47899999999997544
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=99.28 E-value=8.1e-11 Score=112.64 Aligned_cols=188 Identities=18% Similarity=0.174 Sum_probs=101.4
Q ss_pred CCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCC-----C-----C-------
Q 011049 253 GPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGD-----K-----L------- 315 (494)
Q Consensus 253 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~-----~-----~------- 315 (494)
+++|+||+-||-+ + ....+...+..||++||+|++++.++..+... . .
T Consensus 98 ~~~PvvIFSHGlg-----------g----~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~ 162 (379)
T PF03403_consen 98 GKFPVVIFSHGLG-----------G----SRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYL 162 (379)
T ss_dssp S-EEEEEEE--TT-----------------TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT-------
T ss_pred CCCCEEEEeCCCC-----------c----chhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCcccccccccccc
Confidence 3499999999954 2 22223456779999999999987775432100 0 0
Q ss_pred -----------CCchh------HHHHHHHHHHHHHHHHH--c------------------CCCCCCcEEEEecChHHHHH
Q 011049 316 -----------PNDRF------VEQLVSSAEAAVEEVVR--R------------------GVADPSRIAVGGHSYGAFMT 358 (494)
Q Consensus 316 -----------~~~~~------~~~~~~d~~~~v~~l~~--~------------------~~~d~~ri~i~G~S~GG~~a 358 (494)
....+ .+.-+.|+..+++.|.+ . +.+|.++|+++|||+||..+
T Consensus 163 ~~~~~~~~~~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa 242 (379)
T PF03403_consen 163 EEEWIPLRDFDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATA 242 (379)
T ss_dssp --EEEE-----GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHH
T ss_pred ccceeccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHH
Confidence 00000 11225677777777754 1 33567899999999999999
Q ss_pred HHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHH
Q 011049 359 AHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAER 438 (494)
Q Consensus 359 ~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~ 438 (494)
+.++.+. .+|+|+|++.|..- +. .. . ...+++.|+|+|+.+. ... ..+...
T Consensus 243 ~~~l~~d-~r~~~~I~LD~W~~----Pl--~~----------------~--~~~~i~~P~L~InSe~-f~~---~~~~~~ 293 (379)
T PF03403_consen 243 LQALRQD-TRFKAGILLDPWMF----PL--GD----------------E--IYSKIPQPLLFINSES-FQW---WENIFR 293 (379)
T ss_dssp HHHHHH--TT--EEEEES---T----TS---G----------------G--GGGG--S-EEEEEETT-T-----HHHHHH
T ss_pred HHHHhhc-cCcceEEEeCCccc----CC--Cc----------------c--cccCCCCCEEEEECcc-cCC---hhhHHH
Confidence 9999887 88999999888531 10 00 0 1145678999998885 432 333333
Q ss_pred HHHHHHhCCCcEEEEEcCCCCCccC------Cc------------ccH----HHHHHHHHHHHHHhcCC
Q 011049 439 FFDALKGHGALSRLVLLPFEHHVYA------AR------------ENV----MHVIWETDRWLQKYCLS 485 (494)
Q Consensus 439 ~~~~l~~~g~~~~~~~~~~~~H~~~------~~------------~~~----~~~~~~~~~fl~~~l~~ 485 (494)
+.+ +........++.+.|..|.-. .+ .+. ....+.+++||++||+-
T Consensus 294 ~~~-~~~~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~L~~ 361 (379)
T PF03403_consen 294 MKK-VISNNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERALRINNRASLAFLRRHLGL 361 (379)
T ss_dssp HHT-T--TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHHT-
T ss_pred HHH-HhccCCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHHHHHHHHHHHHHHHHHhcCC
Confidence 333 334456678899999999521 00 111 23456789999999873
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=9.2e-11 Score=112.93 Aligned_cols=69 Identities=14% Similarity=0.177 Sum_probs=57.9
Q ss_pred cccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCC-CCCccCCcccHHHHHHHHHHHHHH
Q 011049 410 HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPF-EHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 410 ~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~-~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
.+.++++|+|+++|+.|..+| +.+++++.+.+...+.+++++++++ .||.... +....+.+.+.+||.+
T Consensus 318 ~L~~I~~PtLvI~G~~D~l~p--~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~l-e~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 318 ALSNIEANVLMIPCKQDLLQP--PRYNYKMVDILQKQGKYAEVYEIESINGHMAGV-FDIHLFEKKIYEFLNR 387 (389)
T ss_pred HHhcCCCCEEEEEeCCCCCCC--HHHHHHHHHHhhhcCCCeEEEEECCCCCcchhh-cCHHHHHHHHHHHHcc
Confidence 455789999999999999998 9999999999987666789999985 8998663 6667788888888865
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.26 E-value=8.7e-11 Score=121.81 Aligned_cols=214 Identities=15% Similarity=0.128 Sum_probs=119.8
Q ss_pred EcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCC
Q 011049 230 QRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPII 309 (494)
Q Consensus 230 ~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~ 309 (494)
...||.++.+..+-++ + .|.||++||.+.+ ...|. .....| ..||.|+++|.+
T Consensus 8 ~~~~g~~l~~~~~g~~------~--~~~ivllHG~~~~-----------~~~w~----~~~~~L-~~~~~Vi~~D~~--- 60 (582)
T PRK05855 8 VSSDGVRLAVYEWGDP------D--RPTVVLVHGYPDN-----------HEVWD----GVAPLL-ADRFRVVAYDVR--- 60 (582)
T ss_pred EeeCCEEEEEEEcCCC------C--CCeEEEEcCCCch-----------HHHHH----HHHHHh-hcceEEEEecCC---
Confidence 3468888887765322 1 5789999996521 11222 223344 789999996654
Q ss_pred CCCCCCCC----chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC--CCceeEEEeCCCCCCCC-
Q 011049 310 GEGDKLPN----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYNKT- 382 (494)
Q Consensus 310 g~g~~~~~----~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~--p~~~~a~v~~~~~~~~~- 382 (494)
|+|.+... .......++|+..+++.+ +. ..++.++|||+||.+++.++... ++++...+..++.....
T Consensus 61 G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l---~~--~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~ 135 (582)
T PRK05855 61 GAGRSSAPKRTAAYTLARLADDFAAVIDAV---SP--DRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHV 135 (582)
T ss_pred CCCCCCCCCcccccCHHHHHHHHHHHHHHh---CC--CCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHH
Confidence 55555322 112456677877777765 21 23499999999999988776652 23333333332211000
Q ss_pred -------C---CCCCc----c---c--------------c-----c-ccccc------------------------cHHH
Q 011049 383 -------L---TPFGF----Q---T--------------E-----F-RTLWE------------------------ATNV 401 (494)
Q Consensus 383 -------~---~~~~~----~---~--------------~-----~-~~~~~------------------------~~~~ 401 (494)
. ....+ . . . . ...+. ....
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (582)
T PRK05855 136 GFWLRSGLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKL 215 (582)
T ss_pred HHHHhhcccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHH
Confidence 0 00000 0 0 0 0 00000 0000
Q ss_pred HHh----cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHH
Q 011049 402 YIE----MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDR 477 (494)
Q Consensus 402 ~~~----~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 477 (494)
+.. ......+.++++|+|+++|++|..+| ......+.+.+. ..++++++ .||... .+....+...+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~--~~~~~~~~~~~~----~~~~~~~~-~gH~~~-~e~p~~~~~~i~~ 287 (582)
T PRK05855 216 YRANMIRSLSRPRERYTDVPVQLIVPTGDPYVR--PALYDDLSRWVP----RLWRREIK-AGHWLP-MSHPQVLAAAVAE 287 (582)
T ss_pred HHhhhhhhhccCccCCccCceEEEEeCCCcccC--HHHhccccccCC----cceEEEcc-CCCcch-hhChhHHHHHHHH
Confidence 000 00011134478999999999999997 776665554332 35667776 589876 4667778888999
Q ss_pred HHHHhc
Q 011049 478 WLQKYC 483 (494)
Q Consensus 478 fl~~~l 483 (494)
|+.+.-
T Consensus 288 fl~~~~ 293 (582)
T PRK05855 288 FVDAVE 293 (582)
T ss_pred HHHhcc
Confidence 998753
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.3e-10 Score=125.63 Aligned_cols=202 Identities=16% Similarity=0.182 Sum_probs=121.8
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC----------chhHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN----------DRFVEQL 324 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~----------~~~~~~~ 324 (494)
.|.||++||.+.+ ...|. .....| ..+|.|+.++.+ |+|.+... ....+..
T Consensus 1371 ~~~vVllHG~~~s-----------~~~w~----~~~~~L-~~~~rVi~~Dl~---G~G~S~~~~~~~~~~~~~~~si~~~ 1431 (1655)
T PLN02980 1371 GSVVLFLHGFLGT-----------GEDWI----PIMKAI-SGSARCISIDLP---GHGGSKIQNHAKETQTEPTLSVELV 1431 (1655)
T ss_pred CCeEEEECCCCCC-----------HHHHH----HHHHHH-hCCCEEEEEcCC---CCCCCCCccccccccccccCCHHHH
Confidence 5789999996521 12222 122233 457999996654 55554321 1113344
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC------------------CC
Q 011049 325 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT------------------PF 386 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~------------------~~ 386 (494)
.+++.+.++.+ ..+++.++||||||.+++.++.++|++++++|++++....... ..
T Consensus 1432 a~~l~~ll~~l------~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~ 1505 (1655)
T PLN02980 1432 ADLLYKLIEHI------TPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDH 1505 (1655)
T ss_pred HHHHHHHHHHh------CCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhh
Confidence 44444444432 3468999999999999999999999999999987653211000 00
Q ss_pred Ccccc-----cccccc-------------------cHH----HHHhc------CccccccCCCCCEEEEecCCCCCCCCC
Q 011049 387 GFQTE-----FRTLWE-------------------ATN----VYIEM------SPITHANKIKKPILIIHGEVDDKVGLF 432 (494)
Q Consensus 387 ~~~~~-----~~~~~~-------------------~~~----~~~~~------sp~~~~~~~~~P~li~~G~~D~~v~~~ 432 (494)
..... ....|. +.. .+... +....+.++++|+|+++|++|..+
T Consensus 1506 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~--- 1582 (1655)
T PLN02980 1506 GLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKF--- 1582 (1655)
T ss_pred hHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCcc---
Confidence 00000 000000 000 00000 111236678899999999999875
Q ss_pred HHHHHHHHHHHHhCC--------CcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 433 PMQAERFFDALKGHG--------ALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 433 ~~~~~~~~~~l~~~g--------~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
+..+.++.+.+.+.. ..+++++++++||... .++.+.+.+.+.+||.+.-..
T Consensus 1583 ~~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~-lE~Pe~f~~~I~~FL~~~~~~ 1642 (1655)
T PLN02980 1583 KQIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVH-LENPLPVIRALRKFLTRLHNS 1642 (1655)
T ss_pred HHHHHHHHHHccccccccccccccceEEEEECCCCCchH-HHCHHHHHHHHHHHHHhcccc
Confidence 355667776665421 1268999999999876 477778899999999876543
|
|
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.3e-09 Score=91.53 Aligned_cols=129 Identities=21% Similarity=0.273 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHh
Q 011049 325 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIE 404 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (494)
.+-+...++.-.+.+ ++++||++.|.|+||.++++++..+|....+.+..+++....... + .-|
T Consensus 75 a~~i~~Li~~e~~~G-i~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~--~-----~~~-------- 138 (206)
T KOG2112|consen 75 ADNIANLIDNEPANG-IPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIG--L-----PGW-------- 138 (206)
T ss_pred HHHHHHHHHHHHHcC-CCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhh--c-----cCC--------
Confidence 334444555555555 788999999999999999999999977666677766654311100 0 000
Q ss_pred cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 405 MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 405 ~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
-+ ..+ .+|++..||+.|+.|| ..-.++..+.|+..+.++++..|++.+|.... +.+..+..|+.+
T Consensus 139 -~~---~~~-~~~i~~~Hg~~d~~vp--~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~-----~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 139 -LP---GVN-YTPILLCHGTADPLVP--FRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSP-----QELDDLKSWIKT 203 (206)
T ss_pred -cc---ccC-cchhheecccCCceee--hHHHHHHHHHHHHcCCceeeeecCCccccccH-----HHHHHHHHHHHH
Confidence 00 001 6899999999999998 89899999999999999999999999998763 456677888876
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.20 E-value=6.9e-10 Score=105.27 Aligned_cols=241 Identities=16% Similarity=0.128 Sum_probs=160.9
Q ss_pred cccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCC--chhHHHHHhCC
Q 011049 220 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMT--PTSSLIFLARR 297 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~G 297 (494)
.+++.|...+.+.||..+ ..--.|... +++|+|++.||-- .+...|.... ...+-.|+.+|
T Consensus 44 ~gy~~E~h~V~T~DgYiL-~lhRIp~~~-----~~rp~Vll~HGLl-----------~sS~~Wv~n~p~~sLaf~LadaG 106 (403)
T KOG2624|consen 44 YGYPVEEHEVTTEDGYIL-TLHRIPRGK-----KKRPVVLLQHGLL-----------ASSSSWVLNGPEQSLAFLLADAG 106 (403)
T ss_pred cCCceEEEEEEccCCeEE-EEeeecCCC-----CCCCcEEEeeccc-----------cccccceecCccccHHHHHHHcC
Confidence 356789999999999844 334445542 4489999999953 2223343332 22455789999
Q ss_pred eEEEeCCCCCCCCCCCC-----------CCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCC
Q 011049 298 FAVLAGPSIPIIGEGDK-----------LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP 366 (494)
Q Consensus 298 ~~v~~~~~~~~~g~g~~-----------~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p 366 (494)
|.|...|.||. -++.. +..-.|.+-...|+-+.|+++.+.- ..+++..+|||.|+.....++...|
T Consensus 107 YDVWLgN~RGn-~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T--~~~kl~yvGHSQGtt~~fv~lS~~p 183 (403)
T KOG2624|consen 107 YDVWLGNNRGN-TYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKT--GQEKLHYVGHSQGTTTFFVMLSERP 183 (403)
T ss_pred CceeeecCcCc-ccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhc--cccceEEEEEEccchhheehhcccc
Confidence 99999888763 23222 2333445556889999999998863 4589999999999999999988887
Q ss_pred C---ceeEEEeCCCCCCCCCC---------C-----------CC---c---------------c-c-c------------
Q 011049 367 H---LFCCGIARSGSYNKTLT---------P-----------FG---F---------------Q-T-E------------ 391 (494)
Q Consensus 367 ~---~~~a~v~~~~~~~~~~~---------~-----------~~---~---------------~-~-~------------ 391 (494)
+ +++..++.+|+.-.... . ++ + . . .
T Consensus 184 ~~~~kI~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~ 263 (403)
T KOG2624|consen 184 EYNKKIKSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLL 263 (403)
T ss_pred hhhhhhheeeeecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHH
Confidence 5 68888888887521100 0 00 0 0 0 0
Q ss_pred ---------------------cc--------------------ccc---ccHHHHHh-cCccccccCCCCCEEEEecCCC
Q 011049 392 ---------------------FR--------------------TLW---EATNVYIE-MSPITHANKIKKPILIIHGEVD 426 (494)
Q Consensus 392 ---------------------~~--------------------~~~---~~~~~~~~-~sp~~~~~~~~~P~li~~G~~D 426 (494)
.+ -.| .+...|.. ..|...+.++++|+.+..|.+|
T Consensus 264 ~G~~~~~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D 343 (403)
T KOG2624|consen 264 VGWNSNNWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDND 343 (403)
T ss_pred cCcchHhhhhcccchhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCc
Confidence 00 000 11222222 2456778889999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCc--cCCcccHHHHHHHHHHHHHHhc
Q 011049 427 DKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV--YAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 427 ~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~--~~~~~~~~~~~~~~~~fl~~~l 483 (494)
.++. ++....+...+..... ...+-+++-.|. +......+..+..+++.+.+..
T Consensus 344 ~l~~--~~DV~~~~~~~~~~~~-~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 344 WLAD--PEDVLILLLVLPNSVI-KYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred ccCC--HHHHHHHHHhcccccc-cccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 9987 8888777777766544 233337888886 3345567788999999888765
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.4e-09 Score=116.77 Aligned_cols=233 Identities=14% Similarity=0.096 Sum_probs=133.6
Q ss_pred eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCC-chhHHHHHhCCeEEEeCCCCCCCCCCCC
Q 011049 236 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMT-PTSSLIFLARRFAVLAGPSIPIIGEGDK 314 (494)
Q Consensus 236 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~G~~v~~~~~~~~~g~g~~ 314 (494)
.+..+-|.|......++...|.||++||.+. +...|.... ......|+++||.|++++. +..+....
T Consensus 48 ~~~l~~y~~~~~~~~~~~~~~plllvhg~~~-----------~~~~~d~~~~~s~v~~L~~~g~~v~~~d~-G~~~~~~~ 115 (994)
T PRK07868 48 MYRLRRYFPPDNRPGQPPVGPPVLMVHPMMM-----------SADMWDVTRDDGAVGILHRAGLDPWVIDF-GSPDKVEG 115 (994)
T ss_pred cEEEEEeCCCCccccccCCCCcEEEECCCCC-----------CccceecCCcccHHHHHHHCCCEEEEEcC-CCCChhHc
Confidence 4555666665421111112477888999642 222233211 1124578899999999763 22111100
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC-CCceeEEEeCCCCCCCCCC-----C---
Q 011049 315 LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYNKTLT-----P--- 385 (494)
Q Consensus 315 ~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~-p~~~~a~v~~~~~~~~~~~-----~--- 385 (494)
. ......+.+.++.++++.+.+... +++.++|||+||.+++.+++.+ +++++.+|.++...|.... +
T Consensus 116 ~-~~~~l~~~i~~l~~~l~~v~~~~~---~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~ 191 (994)
T PRK07868 116 G-MERNLADHVVALSEAIDTVKDVTG---RDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGL 191 (994)
T ss_pred C-ccCCHHHHHHHHHHHHHHHHHhhC---CceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhh
Confidence 0 011223334556666666655542 5799999999999998888754 5688888875554331100 0
Q ss_pred --C-------------Cccc-----------------------------ccc------------ccc-cc-----H---H
Q 011049 386 --F-------------GFQT-----------------------------EFR------------TLW-EA-----T---N 400 (494)
Q Consensus 386 --~-------------~~~~-----------------------------~~~------------~~~-~~-----~---~ 400 (494)
. .... +.. ..| .. . .
T Consensus 192 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~ 271 (994)
T PRK07868 192 AAAAADFMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLK 271 (994)
T ss_pred hhcccccchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHH
Confidence 0 0000 000 001 00 0 0
Q ss_pred HHHhc-Ccc----------ccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEE-EEcCCCCCc--cCCcc
Q 011049 401 VYIEM-SPI----------THANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRL-VLLPFEHHV--YAARE 466 (494)
Q Consensus 401 ~~~~~-sp~----------~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~-~~~~~~~H~--~~~~~ 466 (494)
.+... ... ..+.++++|+|+++|++|..+| +..++.+.+.+.. .++ .+++++||. +....
T Consensus 272 ~~~~~n~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp--~~~~~~l~~~i~~----a~~~~~~~~~GH~g~~~g~~ 345 (994)
T PRK07868 272 QFIAHNRMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQ--PASVRGIRRAAPN----AEVYESLIRAGHFGLVVGSR 345 (994)
T ss_pred HHHHhCcccCceEEECCEEcchhhCCCCEEEEEeCCCCCCC--HHHHHHHHHhCCC----CeEEEEeCCCCCEeeeechh
Confidence 01110 111 1367888999999999999998 8888777665532 344 567899997 34456
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCC
Q 011049 467 NVMHVIWETDRWLQKYCLSNTSDG 490 (494)
Q Consensus 467 ~~~~~~~~~~~fl~~~l~~~~~~~ 490 (494)
.....+..+.+||.++-....++.
T Consensus 346 a~~~~wp~i~~wl~~~~~~~~~~~ 369 (994)
T PRK07868 346 AAQQTWPTVADWVKWLEGDGDKPE 369 (994)
T ss_pred hhhhhChHHHHHHHHhccCCCCCc
Confidence 667889999999999877655543
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=99.18 E-value=8.9e-11 Score=118.71 Aligned_cols=129 Identities=18% Similarity=0.157 Sum_probs=90.8
Q ss_pred eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhC-C-eEEEeCCCC-CCCCCC
Q 011049 236 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-R-FAVLAGPSI-PIIGEG 312 (494)
Q Consensus 236 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G-~~v~~~~~~-~~~g~g 312 (494)
-+...++.|....+.+ ++|+||++|||+|..++.. .+ ....|+.+ + ++|+.+++| +..|+.
T Consensus 78 cl~l~i~~p~~~~~~~--~~pv~v~ihGG~~~~g~~~--------~~------~~~~~~~~~~~~~vv~~~yRlg~~g~~ 141 (493)
T cd00312 78 CLYLNVYTPKNTKPGN--SLPVMVWIHGGGFMFGSGS--------LY------PGDGLAREGDNVIVVSINYRLGVLGFL 141 (493)
T ss_pred CCeEEEEeCCCCCCCC--CCCEEEEEcCCccccCCCC--------CC------ChHHHHhcCCCEEEEEecccccccccc
Confidence 4777888897643223 3899999999987654322 11 11234443 3 999998988 666664
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHh--CCCceeEEEeCCCCCC
Q 011049 313 DKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGSYN 380 (494)
Q Consensus 313 ~~~~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~--~p~~~~a~v~~~~~~~ 380 (494)
.........+....|+..+++|+.++ ...|+++|.|+|+|+||+++.+++.. .+.+|+++|+.+|...
T Consensus 142 ~~~~~~~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 142 STGDIELPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred cCCCCCCCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 43222222344578899999999875 23799999999999999999988876 2358999999988654
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.5e-10 Score=102.83 Aligned_cols=208 Identities=14% Similarity=0.109 Sum_probs=81.4
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC-CCCCCCCCCCchhHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP-IIGEGDKLPNDRFVEQLVSSAEAAVE 333 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~-~~g~g~~~~~~~~~~~~~~d~~~~v~ 333 (494)
.-+||++-|-+ ++.... ++....+..|...||.|+.+.-.. ..|+|. ...++.++|+.++|+
T Consensus 33 ~~~llfIGGLt-----------DGl~tv-pY~~~La~aL~~~~wsl~q~~LsSSy~G~G~-----~SL~~D~~eI~~~v~ 95 (303)
T PF08538_consen 33 PNALLFIGGLT-----------DGLLTV-PYLPDLAEALEETGWSLFQVQLSSSYSGWGT-----SSLDRDVEEIAQLVE 95 (303)
T ss_dssp SSEEEEE--TT-------------TT-S-TCHHHHHHHHT-TT-EEEEE--GGGBTTS-S-------HHHHHHHHHHHHH
T ss_pred CcEEEEECCCC-----------CCCCCC-chHHHHHHHhccCCeEEEEEEecCccCCcCc-----chhhhHHHHHHHHHH
Confidence 45799987732 222111 222233445555799999844332 234443 345778999999999
Q ss_pred HHHHcC--CCCCCcEEEEecChHHHHHHHHHHhCC-----CceeEEEeCCCCCCCCCCCCCccc-cc-------------
Q 011049 334 EVVRRG--VADPSRIAVGGHSYGAFMTAHLLAHAP-----HLFCCGIARSGSYNKTLTPFGFQT-EF------------- 392 (494)
Q Consensus 334 ~l~~~~--~~d~~ri~i~G~S~GG~~a~~~~~~~p-----~~~~a~v~~~~~~~~~~~~~~~~~-~~------------- 392 (494)
||+... .-..++|+++|||-|-.-+++++.+.. ..+.++|+.+|++|.......... +.
T Consensus 96 ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~ 175 (303)
T PF08538_consen 96 YLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIA 175 (303)
T ss_dssp HHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHH
T ss_pred HHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHH
Confidence 999872 125689999999999999999988763 569999999999997654433211 00
Q ss_pred -c------------ccc-ccH----HHHHhcCc----------------cccccCCCCCEEEEecCCCCCCCCCHHHHHH
Q 011049 393 -R------------TLW-EAT----NVYIEMSP----------------ITHANKIKKPILIIHGEVDDKVGLFPMQAER 438 (494)
Q Consensus 393 -~------------~~~-~~~----~~~~~~sp----------------~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~ 438 (494)
+ ..+ +.+ ..+...+| .....+++.|+|++.+++|..|| +..+-+.
T Consensus 176 ~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP-~~vdk~~ 254 (303)
T PF08538_consen 176 EGKGDEILPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVP-PWVDKEA 254 (303)
T ss_dssp CT-TT-GG----GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT-----------
T ss_pred cCCCCceeeccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceec-ccccccc
Confidence 0 000 000 00000111 12356678899999999999997 2334456
Q ss_pred HHHHHHhCCCc----EEEEEcCCCCCccCCcccH---HHHHHHHHHHHH
Q 011049 439 FFDALKGHGAL----SRLVLLPFEHHVYAARENV---MHVIWETDRWLQ 480 (494)
Q Consensus 439 ~~~~l~~~g~~----~~~~~~~~~~H~~~~~~~~---~~~~~~~~~fl~ 480 (494)
+.+.++..-.+ ..-.++||+.|.+...... +...+++..||+
T Consensus 255 Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 255 LLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp -------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 66776654322 2345899999998754432 245666777763
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=99.17 E-value=1e-09 Score=101.51 Aligned_cols=194 Identities=15% Similarity=0.147 Sum_probs=119.4
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEee-e--eccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETW-Y--KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~-~--~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
+++||..++ ..|++++||++-+....|+|||||++|+|+.- . .....++|+++.++| |++++|.. +.-
T Consensus 58 ~DdlWe~sl---k~g~~~ritS~lGVvnn~kf~pdGrkvaf~rv~~~ss~~taDly~v~~e~G--e~kRiTyf-Gr~--- 128 (668)
T COG4946 58 CDDLWEYSL---KDGKPLRITSGLGVVNNPKFSPDGRKVAFSRVMLGSSLQTADLYVVPSEDG--EAKRITYF-GRR--- 128 (668)
T ss_pred chHHHHhhh---ccCCeeEEecccceeccccCCCCCcEEEEEEEEecCCCccccEEEEeCCCC--cEEEEEEe-ccc---
Confidence 567777777 88999999999888899999999999999663 2 124579999999988 99999988 433
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCC--------------------------
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTG-------------------------- 147 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g-------------------------- 147 (494)
-.-+..|+|||+-|+++--.. |...-+.||.++.++.
T Consensus 129 --fT~VaG~~~dg~iiV~TD~~t---------------PF~q~~~lYkv~~dg~~~e~LnlGpathiv~~dg~ivigRnt 191 (668)
T COG4946 129 --FTRVAGWIPDGEIIVSTDFHT---------------PFSQWTELYKVNVDGIKTEPLNLGPATHIVIKDGIIVIGRNT 191 (668)
T ss_pred --cceeeccCCCCCEEEEeccCC---------------CcccceeeeEEccCCceeeeccCCceeeEEEeCCEEEEccCc
Confidence 234556999999887764321 1111122333333333
Q ss_pred ------------ceEEEEeeCcc-hhhhheeeeccCCCccccc-c--cCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 148 ------------SKERIWESNRE-KYFETAVALVFGQGEEDIN-L--NQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 148 ------------~~~~l~~~~~~-~~~~~~~~~~s~~~~~~~s-~--d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
..-.||-.... ..|+.++.+ ++ .+| | -+.+++|. +.-.-...||.+++++...++-|+
T Consensus 192 ydLP~WK~YkGGtrGklWis~d~g~tFeK~vdl---~~--~vS~PmIV~~RvYFl-sD~eG~GnlYSvdldGkDlrrHTn 265 (668)
T COG4946 192 YDLPHWKGYKGGTRGKLWISSDGGKTFEKFVDL---DG--NVSSPMIVGERVYFL-SDHEGVGNLYSVDLDGKDLRRHTN 265 (668)
T ss_pred ccCcccccccCCccceEEEEecCCcceeeeeec---CC--CcCCceEEcceEEEE-ecccCccceEEeccCCchhhhcCC
Confidence 22234433211 122222221 11 111 1 13344443 233445789999999999888887
Q ss_pred CCCCCCcccccccEEEEEEcCCCceEEEEEEeCCC
Q 011049 212 FPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPG 246 (494)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~ 246 (494)
+..-.+......-++|.|.. .| ..++|-|..
T Consensus 266 FtdYY~R~~nsDGkrIvFq~-~G---dIylydP~t 296 (668)
T COG4946 266 FTDYYPRNANSDGKRIVFQN-AG---DIYLYDPET 296 (668)
T ss_pred chhccccccCCCCcEEEEec-CC---cEEEeCCCc
Confidence 76555544444455666653 22 346666754
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.17 E-value=7.3e-11 Score=97.18 Aligned_cols=172 Identities=22% Similarity=0.252 Sum_probs=106.8
Q ss_pred CeEEEeCCCCCCCCCCCCCCCc-hh-HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEe
Q 011049 297 RFAVLAGPSIPIIGEGDKLPND-RF-VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIA 374 (494)
Q Consensus 297 G~~v~~~~~~~~~g~g~~~~~~-~~-~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~ 374 (494)
-+.+++.| -.|||.+-+.. ++ .+...+|...+++-+.... -.++.|+|||-||..|+.+|+++++.+...|.
T Consensus 71 ~~TivawD---PpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk---~~~fsvlGWSdGgiTalivAak~~e~v~rmii 144 (277)
T KOG2984|consen 71 QVTIVAWD---PPGYGTSRPPERKFEVQFFMKDAEYAVDLMEALK---LEPFSVLGWSDGGITALIVAAKGKEKVNRMII 144 (277)
T ss_pred ceEEEEEC---CCCCCCCCCCcccchHHHHHHhHHHHHHHHHHhC---CCCeeEeeecCCCeEEEEeeccChhhhhhhee
Confidence 37788744 45777774432 22 3445677788888776654 48899999999999999999999988766665
Q ss_pred CCCCCCCC-C-----------CCCCccc-----------ccccccccH----HHHHhc---Cc-cccccCCCCCEEEEec
Q 011049 375 RSGSYNKT-L-----------TPFGFQT-----------EFRTLWEAT----NVYIEM---SP-ITHANKIKKPILIIHG 423 (494)
Q Consensus 375 ~~~~~~~~-~-----------~~~~~~~-----------~~~~~~~~~----~~~~~~---sp-~~~~~~~~~P~li~~G 423 (494)
..+..-.. . ..|.-.. .....|... ..+... .. ...+.++++|+||+||
T Consensus 145 wga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG 224 (277)
T KOG2984|consen 145 WGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHG 224 (277)
T ss_pred ecccceecchhHHHHhchHHHhhhhhhhcchHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeC
Confidence 54432100 0 0010000 001111100 000000 00 1246789999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 424 EVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 424 ~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
++|+.|+ -.+. .+...++. -.++.++|..+|.+.. ...+.+...+.+||++
T Consensus 225 ~kDp~~~--~~hv-~fi~~~~~---~a~~~~~peGkHn~hL-rya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 225 GKDPFCG--DPHV-CFIPVLKS---LAKVEIHPEGKHNFHL-RYAKEFNKLVLDFLKS 275 (277)
T ss_pred CcCCCCC--CCCc-cchhhhcc---cceEEEccCCCcceee-echHHHHHHHHHHHhc
Confidence 9999986 4433 34444433 3689999999999874 4455677778888875
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.16 E-value=5.6e-09 Score=91.82 Aligned_cols=126 Identities=24% Similarity=0.248 Sum_probs=79.9
Q ss_pred HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccC
Q 011049 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANK 413 (494)
Q Consensus 334 ~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~ 413 (494)
++.+...+|++|.+|+|||+||.+++.++..+|+.|.+.++.+|-.- |.+...+....-.... +
T Consensus 127 ~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW---------------w~n~~~l~~~~~~~~~-~ 190 (264)
T COG2819 127 FIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW---------------WHNEAILREIESLKLL-K 190 (264)
T ss_pred HHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhh---------------hCCHHHhccccccccC-C
Confidence 34444668999999999999999999999999999999999998432 2333333332222222 2
Q ss_pred CCCCEEEEe--cCCCCCCC----CCHHHHHHHHHHHHh-CCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 414 IKKPILIIH--GEVDDKVG----LFPMQAERFFDALKG-HGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 414 ~~~P~li~~--G~~D~~v~----~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
..+++|.. |+.|.-.. ....++.+..+.+++ .|..+.+..+|+++|+-. ....+..++.|+.
T Consensus 191 -~~~i~l~iG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~~~~~~~H~~~----~~~~~~~al~~l~ 259 (264)
T COG2819 191 -TKRICLYIGSGELDSSRSIRMAENKQEAAELSSLLEKRTGARLVFQEEPLEHHGSV----IHASLPSALRFLD 259 (264)
T ss_pred -CcceEEEecccccCcchhhhhhhHHHHHHHHHHHHhhccCCceEecccccccccch----HHHHHHHHHHhhh
Confidence 33444444 44443110 013345566666777 788889999999899633 2234444555553
|
|
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.8e-10 Score=102.81 Aligned_cols=217 Identities=19% Similarity=0.152 Sum_probs=122.9
Q ss_pred cEEEEEEcC-CCceEEEEEEeCCCCCC-CCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 224 KEMIKYQRK-DGVPLTATLYLPPGYDQ-SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 224 ~~~~~~~~~-dg~~~~~~l~~P~~~~~-~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
...+++... .+.+++.++++|..... -..+++|+|++.||.+- ....| .+.+..|++.||+|.
T Consensus 38 ~~~i~~~~~~r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs-----------~~~~f----~~~A~~lAs~Gf~Va 102 (365)
T COG4188 38 FVTITLNDPQRDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGS-----------YVTGF----AWLAEHLASYGFVVA 102 (365)
T ss_pred EEEEeccCcccCCccccceeccCCCccccccCcCCeEEecCCCCC-----------Cccch----hhhHHHHhhCceEEE
Confidence 444555443 35688999999976422 11246999999999541 11222 256778999999999
Q ss_pred eCCCCCCCCCCCCC---------CCchhHHHHHHHHHHHHHHHHHc---C----CCCCCcEEEEecChHHHHHHHHHHhC
Q 011049 302 AGPSIPIIGEGDKL---------PNDRFVEQLVSSAEAAVEEVVRR---G----VADPSRIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 302 ~~~~~~~~g~g~~~---------~~~~~~~~~~~d~~~~v~~l~~~---~----~~d~~ri~i~G~S~GG~~a~~~~~~~ 365 (494)
.++.-++. .|... ....| -+...|+...+++|.+. + .+|+.+|+++|||+||+.++.++.-+
T Consensus 103 ~~~hpgs~-~~~~~~~~~~~~~~~p~~~-~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~ 180 (365)
T COG4188 103 APDHPGSN-AGGAPAAYAGPGSYAPAEW-WERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAE 180 (365)
T ss_pred eccCCCcc-cccCChhhcCCcccchhhh-hcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccc
Confidence 85553321 12110 11122 23467888999999887 4 47899999999999999999987655
Q ss_pred CCc---eeEEEe---CCCCCCCCCCCCCcccccccccccHHHHHhcCcc-----------------ccccCCCCCEEEEe
Q 011049 366 PHL---FCCGIA---RSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPI-----------------THANKIKKPILIIH 422 (494)
Q Consensus 366 p~~---~~a~v~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~-----------------~~~~~~~~P~li~~ 422 (494)
.+. ...+.. .+.-.. ........+....|.....|...+|. .-+.+++.|++++.
T Consensus 181 ~~~~~~~~~C~~~~~~~~~~~--~~~~~~l~q~~av~~~~~~~~~rDpriravvA~~p~~~~~Fg~tgl~~v~~P~~~~a 258 (365)
T COG4188 181 LDAEALLQHCESASRICLDPP--GLNGRLLNQCAAVWLPRQAYDLRDPRIRAVVAINPALGMIFGTTGLVKVTDPVLLAA 258 (365)
T ss_pred ccHHHHHHHhhhhhhcccCCC--CcChhhhccccccccchhhhccccccceeeeeccCCcccccccccceeeecceeeec
Confidence 331 111110 000000 00000001111122222223222221 12567889999999
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCcc
Q 011049 423 GEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVY 462 (494)
Q Consensus 423 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 462 (494)
|..|...| +..+....+..|.. ....+...|++.|.-
T Consensus 259 ~s~D~~aP-~~~~~~~~f~~l~g--~~k~~~~vp~a~h~s 295 (365)
T COG4188 259 GSADGFAP-PVTEQIRPFGYLPG--ALKYLRLVPGATHFS 295 (365)
T ss_pred ccccccCC-cccccccccccCCc--chhheeecCCCcccc
Confidence 99999765 22333333343432 223567788889963
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.9e-09 Score=95.19 Aligned_cols=191 Identities=18% Similarity=0.157 Sum_probs=118.0
Q ss_pred CCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCC-------------CC----
Q 011049 252 DGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG-------------DK---- 314 (494)
Q Consensus 252 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g-------------~~---- 314 (494)
.+++|+||+-||-+ + ++.++......||++||+|.++..|+....- .+
T Consensus 115 ~~k~PvvvFSHGLg-----------g----sRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ 179 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLG-----------G----SRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIK 179 (399)
T ss_pred CCCccEEEEecccc-----------c----chhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceE
Confidence 45699999999954 2 2223334566889999999997776643210 00
Q ss_pred ----CCCch-h------HHHHHHHHHHHHHHHHHc---------------------CCCCCCcEEEEecChHHHHHHHHH
Q 011049 315 ----LPNDR-F------VEQLVSSAEAAVEEVVRR---------------------GVADPSRIAVGGHSYGAFMTAHLL 362 (494)
Q Consensus 315 ----~~~~~-~------~~~~~~d~~~~v~~l~~~---------------------~~~d~~ri~i~G~S~GG~~a~~~~ 362 (494)
..+.. + ...-+.++..|+.-|.+. +.+|..+++|+|||+||..++...
T Consensus 180 ir~v~~~ekef~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~s 259 (399)
T KOG3847|consen 180 IRLVEANEKEFHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASS 259 (399)
T ss_pred eeeeccCceeEEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhh
Confidence 00111 0 112245555555544331 235677899999999999999888
Q ss_pred HhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHH
Q 011049 363 AHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDA 442 (494)
Q Consensus 363 ~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~ 442 (494)
+.+ ..|+|+|+..++. +.-+. .+..+++-|+|+|.- .|.. ..++....++
T Consensus 260 s~~-t~FrcaI~lD~WM--------~Pl~~----------------~~~~~arqP~~finv-~~fQ----~~en~~vmKk 309 (399)
T KOG3847|consen 260 SSH-TDFRCAIALDAWM--------FPLDQ----------------LQYSQARQPTLFINV-EDFQ----WNENLLVMKK 309 (399)
T ss_pred ccc-cceeeeeeeeeee--------cccch----------------hhhhhccCCeEEEEc-cccc----chhHHHHHHh
Confidence 887 7899999987642 11110 123456789999883 3443 3345555566
Q ss_pred HHhCCCcEEEEEcCCCCCccC------------------C----cccHHHHHHHHHHHHHHhcCCCC
Q 011049 443 LKGHGALSRLVLLPFEHHVYA------------------A----RENVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 443 l~~~g~~~~~~~~~~~~H~~~------------------~----~~~~~~~~~~~~~fl~~~l~~~~ 487 (494)
....+..-.++++.|.-|.-. . .+......+..++||++|+...+
T Consensus 310 i~~~n~g~~~it~~GsVHqnfsDfpfv~p~~i~k~f~~kg~~dpy~~~~~~~r~slaFLq~h~d~~q 376 (399)
T KOG3847|consen 310 IESQNEGNHVITLDGSVHQNFSDFPFVTPNWIGKVFKVKGETDPYEAMQIAIRASLAFLQKHLDLVQ 376 (399)
T ss_pred hhCCCccceEEEEccceecccccCccccHHHHHHHhccCCCCChHHHHHHHHHHHHHHHHhhhhhhc
Confidence 655555557888888888421 0 11223455678999999986543
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.2e-08 Score=101.19 Aligned_cols=88 Identities=11% Similarity=0.051 Sum_probs=59.1
Q ss_pred hhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHH----HHHH
Q 011049 288 TSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTA----HLLA 363 (494)
Q Consensus 288 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~----~~~~ 363 (494)
.....|+++||.|++++-+ |.|.+.....+.+...+++.++++.+.+.- ..+++.++|||+||.+++ .+++
T Consensus 211 Slv~~L~~qGf~V~~iDwr---gpg~s~~~~~~ddY~~~~i~~al~~v~~~~--g~~kv~lvG~cmGGtl~a~ala~~aa 285 (532)
T TIGR01838 211 SLVRWLVEQGHTVFVISWR---NPDASQADKTFDDYIRDGVIAALEVVEAIT--GEKQVNCVGYCIGGTLLSTALAYLAA 285 (532)
T ss_pred HHHHHHHHCCcEEEEEECC---CCCcccccCChhhhHHHHHHHHHHHHHHhc--CCCCeEEEEECcCcHHHHHHHHHHHH
Confidence 3566889999999986654 344332222222333456778888887652 457899999999999852 2344
Q ss_pred hC-CCceeEEEeCCCCCC
Q 011049 364 HA-PHLFCCGIARSGSYN 380 (494)
Q Consensus 364 ~~-p~~~~a~v~~~~~~~ 380 (494)
.+ ++++++++.++...|
T Consensus 286 ~~~~~rv~slvll~t~~D 303 (532)
T TIGR01838 286 RGDDKRIKSATFFTTLLD 303 (532)
T ss_pred hCCCCccceEEEEecCcC
Confidence 54 678998888776655
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.2e-08 Score=93.58 Aligned_cols=219 Identities=16% Similarity=0.090 Sum_probs=123.3
Q ss_pred eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEe--CCCCCCCCC--
Q 011049 236 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA--GPSIPIIGE-- 311 (494)
Q Consensus 236 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~--~~~~~~~g~-- 311 (494)
..+..+++|+..++.. .|++|++.|.| + ..|.......+..|+..|++.+. .++++.+--
T Consensus 76 ~a~~~~~~P~~~~~~~---rp~~IhLagTG------------D-h~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~ 139 (348)
T PF09752_consen 76 TARFQLLLPKRWDSPY---RPVCIHLAGTG------------D-HGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKD 139 (348)
T ss_pred heEEEEEECCccccCC---CceEEEecCCC------------c-cchhhhhhhhhhHHHHcCcceEEEecccccccChhH
Confidence 4566677788753322 79999999864 1 11222222235567778988776 333322110
Q ss_pred --CCCCCC-chh---HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCC---
Q 011049 312 --GDKLPN-DRF---VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT--- 382 (494)
Q Consensus 312 --g~~~~~-~~~---~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~--- 382 (494)
+..... .+. ....+.+....++|+.++|+ .+++|.|.||||.+|..+++.+|..+.++-..++.+...
T Consensus 140 Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~~~G~---~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt 216 (348)
T PF09752_consen 140 QRRSSLRNVSDLFVMGRATILESRALLHWLEREGY---GPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFT 216 (348)
T ss_pred hhcccccchhHHHHHHhHHHHHHHHHHHHHHhcCC---CceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchh
Confidence 000000 011 23457888899999999986 699999999999999999999998765554444432210
Q ss_pred ------CCCCCc-ccc---------c---------------ccccccHHH----HHhcCccccccCCCC-----CEEEEe
Q 011049 383 ------LTPFGF-QTE---------F---------------RTLWEATNV----YIEMSPITHANKIKK-----PILIIH 422 (494)
Q Consensus 383 ------~~~~~~-~~~---------~---------------~~~~~~~~~----~~~~sp~~~~~~~~~-----P~li~~ 422 (494)
...|.. ..+ . ...+.+.+. ....+-..++.+..+ .+.++.
T Consensus 217 ~Gvls~~i~W~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~ 296 (348)
T PF09752_consen 217 EGVLSNSINWDALEKQFEDTVYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVA 296 (348)
T ss_pred hhhhhcCCCHHHHHHHhcccchhhhhcccccCcccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEE
Confidence 011110 000 0 000011111 111233344555443 378899
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 423 GEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 423 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
+++|..|| ..+.. .|++.=..+++.++++ ||.-.....+..+.+.|.+=|+
T Consensus 297 A~~DaYVP--r~~v~----~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 297 AKNDAYVP--RHGVL----SLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred ecCceEec--hhhcc----hHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 99999997 66544 4554434467777877 9974433444455555655443
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.2e-10 Score=103.41 Aligned_cols=155 Identities=24% Similarity=0.257 Sum_probs=95.5
Q ss_pred eEEEeCCCCCCCCCCCCCC--CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeC
Q 011049 298 FAVLAGPSIPIIGEGDKLP--NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIAR 375 (494)
Q Consensus 298 ~~v~~~~~~~~~g~g~~~~--~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~ 375 (494)
|.|+++|.+ |.|.+.. ...+......|+.+.++.+++.-.+ +++.++||||||.+++.++..+|++++++|+.
T Consensus 1 f~vi~~d~r---G~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~ 75 (230)
T PF00561_consen 1 FDVILFDLR---GFGYSSPHWDPDFPDYTTDDLAADLEALREALGI--KKINLVGHSMGGMLALEYAAQYPERVKKLVLI 75 (230)
T ss_dssp EEEEEEECT---TSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTT--SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEE
T ss_pred CEEEEEeCC---CCCCCCCCccCCcccccHHHHHHHHHHHHHHhCC--CCeEEEEECCChHHHHHHHHHCchhhcCcEEE
Confidence 567775554 4555543 1222223355666667777665333 45999999999999999999999999999998
Q ss_pred CCCC--C----CCCCCC-Ccc------------------------------cc-ccc--------cccc-----------
Q 011049 376 SGSY--N----KTLTPF-GFQ------------------------------TE-FRT--------LWEA----------- 398 (494)
Q Consensus 376 ~~~~--~----~~~~~~-~~~------------------------------~~-~~~--------~~~~----------- 398 (494)
+++. . ...... .+. .. ... .+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (230)
T PF00561_consen 76 SPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMF 155 (230)
T ss_dssp SESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred eeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhc
Confidence 8851 0 000000 000 00 000 0000
Q ss_pred ---HHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccC
Q 011049 399 ---TNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA 463 (494)
Q Consensus 399 ---~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 463 (494)
...+...++...+.++++|+|+++|++|..+| +.....+.+.+. ..+++++++.||...
T Consensus 156 ~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p--~~~~~~~~~~~~----~~~~~~~~~~GH~~~ 217 (230)
T PF00561_consen 156 WNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVP--PESSEQLAKLIP----NSQLVLIEGSGHFAF 217 (230)
T ss_dssp HHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSH--HHHHHHHHHHST----TEEEEEETTCCSTHH
T ss_pred cccccccccccccccccccCCCeEEEEeCCCCCCC--HHHHHHHHHhcC----CCEEEECCCCChHHH
Confidence 00111223334567799999999999999987 776666444433 378999999999864
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.7e-08 Score=93.89 Aligned_cols=76 Identities=16% Similarity=0.077 Sum_probs=46.4
Q ss_pred CCCCCeeccccc-----cccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeC
Q 011049 29 EGEKPEILHKLD-----LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRT 103 (494)
Q Consensus 29 ~~~~~~~lt~~~-----~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~s 103 (494)
.|-+.+|||..+ .++..+.|++||++|+|.+.+++ ..++|.++++++ +.+|||+.++.+. +-.++|
T Consensus 19 TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg-~~nly~lDL~t~--~i~QLTdg~g~~~------~g~~~s 89 (386)
T PF14583_consen 19 TGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDG-NRNLYLLDLATG--EITQLTDGPGDNT------FGGFLS 89 (386)
T ss_dssp T--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTS-S-EEEEEETTT---EEEE---SS-B-T------TT-EE-
T ss_pred CCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCC-CcceEEEEcccC--EEEECccCCCCCc------cceEEe
Confidence 566788898755 47778999999999999998877 889999999998 9999999887542 112379
Q ss_pred CCCCEEEEEE
Q 011049 104 STGTNVIAKI 113 (494)
Q Consensus 104 pDG~~i~~~~ 113 (494)
|+++.++|..
T Consensus 90 ~~~~~~~Yv~ 99 (386)
T PF14583_consen 90 PDDRALYYVK 99 (386)
T ss_dssp TTSSEEEEEE
T ss_pred cCCCeEEEEE
Confidence 9999998864
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.1e-09 Score=103.74 Aligned_cols=127 Identities=22% Similarity=0.199 Sum_probs=87.9
Q ss_pred EEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCC-eEEEeCCCC-CCCCCC--
Q 011049 237 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR-FAVLAGPSI-PIIGEG-- 312 (494)
Q Consensus 237 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-~~v~~~~~~-~~~g~g-- 312 (494)
+...++.|+ . +. .+.|||||+|||++..++.+... +....|+++| ++|+.+|+| |..|+=
T Consensus 80 L~LNIwaP~-~-~a--~~~PVmV~IHGG~y~~Gs~s~~~------------ydgs~La~~g~vVvVSvNYRLG~lGfL~~ 143 (491)
T COG2272 80 LYLNIWAPE-V-PA--EKLPVMVYIHGGGYIMGSGSEPL------------YDGSALAARGDVVVVSVNYRLGALGFLDL 143 (491)
T ss_pred eeEEeeccC-C-CC--CCCcEEEEEeccccccCCCcccc------------cChHHHHhcCCEEEEEeCcccccceeeeh
Confidence 777888898 2 22 23899999999987665443211 2345778888 999988886 333321
Q ss_pred CCCC--CchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHhCC---CceeEEEeCCCCCC
Q 011049 313 DKLP--NDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHAP---HLFCCGIARSGSYN 380 (494)
Q Consensus 313 ~~~~--~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~~p---~~~~a~v~~~~~~~ 380 (494)
.+.. .....+....|++.+++|+.++ ..-||++|.|+|.|.|++.++.+++. | .+|+.+|+.+|...
T Consensus 144 ~~~~~~~~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 144 SSLDTEDAFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred hhccccccccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 0001 1111123578999999999875 33699999999999999999888775 4 37888888887653
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.97 E-value=8.9e-09 Score=99.04 Aligned_cols=180 Identities=9% Similarity=-0.002 Sum_probs=109.4
Q ss_pred CCCCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccc
Q 011049 12 VEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV 91 (494)
Q Consensus 12 ~~~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~ 91 (494)
...+..+.+|+.|+ +.++.++|+........+.|||||+.|+|+. +++||+.++.++ +.++||.......
T Consensus 17 ~r~s~~~~y~i~d~---~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~-----~~nly~~~~~~~--~~~~lT~dg~~~i 86 (353)
T PF00930_consen 17 WRHSFKGDYYIYDI---ETGEITPLTPPPPKLQDAKWSPDGKYIAFVR-----DNNLYLRDLATG--QETQLTTDGEPGI 86 (353)
T ss_dssp SSSEEEEEEEEEET---TTTEEEESS-EETTBSEEEE-SSSTEEEEEE-----TTEEEEESSTTS--EEEESES--TTTE
T ss_pred eeeccceeEEEEec---CCCceEECcCCccccccceeecCCCeeEEEe-----cCceEEEECCCC--CeEEeccccceeE
Confidence 44567789999999 8888899988877778899999999999985 568999999887 8888988541110
Q ss_pred c-----------CCCCCCceeeCCCCCEEEEEEeccCccc-----------------eEEEEccCCCCCCCCCCceEeee
Q 011049 92 Y-----------SDPGSPMMTRTSTGTNVIAKIKKENDEQ-----------------IYILLNGRGFTPEGNIPFLDLFD 143 (494)
Q Consensus 92 ~-----------~~~~~~~~~~spDG~~i~~~~~~~~~~~-----------------~~~~~~~~g~~~~~~~~~l~~~d 143 (494)
+ .......+.|||||++|+|......... ..+.|..-|.. .....|+++|
T Consensus 87 ~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~--np~v~l~v~~ 164 (353)
T PF00930_consen 87 YNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDP--NPRVSLFVVD 164 (353)
T ss_dssp EESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS-----EEEEEEEE
T ss_pred EcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCc--CCceEEEEEE
Confidence 0 0112334569999999999875433211 12233333322 1234688899
Q ss_pred cCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecC-CCCCeEEEEEcCCCceeEe
Q 011049 144 INTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESK-TEITQYHILSWPLKKSSQI 209 (494)
Q Consensus 144 ~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~-~~p~~l~~~~~~~~~~~~l 209 (494)
+++++...+-.... .......+ ....|++|+..+++...+. ..-..+.+++..++..+.+
T Consensus 165 ~~~~~~~~~~~~~~--~~~~~~yl----~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~ 225 (353)
T PF00930_consen 165 LASGKTTELDPPNS--LNPQDYYL----TRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVV 225 (353)
T ss_dssp SSSTCCCEE---HH--HHTSSEEE----EEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEE
T ss_pred CCCCcEEEeeeccc--cCCCccCc----ccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEE
Confidence 99987654322210 00011111 1348889988666665543 3344688888877665544
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.3e-07 Score=81.10 Aligned_cols=207 Identities=18% Similarity=0.168 Sum_probs=109.0
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 308 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 308 (494)
+.-.+|..|..|-.+|+.-.+.+ .|.|++..|-+ ...+.| ...+.+|+..||.|+..+....
T Consensus 7 i~~~~~~~I~vwet~P~~~~~~~---~~tiliA~Gf~-----------rrmdh~----agLA~YL~~NGFhViRyDsl~H 68 (294)
T PF02273_consen 7 IRLEDGRQIRVWETRPKNNEPKR---NNTILIAPGFA-----------RRMDHF----AGLAEYLSANGFHVIRYDSLNH 68 (294)
T ss_dssp EEETTTEEEEEEEE---TTS------S-EEEEE-TT------------GGGGGG----HHHHHHHHTTT--EEEE---B-
T ss_pred eEcCCCCEEEEeccCCCCCCccc---CCeEEEecchh-----------HHHHHH----HHHHHHHhhCCeEEEecccccc
Confidence 44578999999999998755544 68999887621 111112 2356688999999998666544
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC----
Q 011049 309 IGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT---- 384 (494)
Q Consensus 309 ~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~---- 384 (494)
.|................|+..+++||.+.+. .+++++..|.-|-+|+..++.- + ..-+|...|+.|...+
T Consensus 69 vGlSsG~I~eftms~g~~sL~~V~dwl~~~g~---~~~GLIAaSLSaRIAy~Va~~i-~-lsfLitaVGVVnlr~TLe~a 143 (294)
T PF02273_consen 69 VGLSSGDINEFTMSIGKASLLTVIDWLATRGI---RRIGLIAASLSARIAYEVAADI-N-LSFLITAVGVVNLRDTLEKA 143 (294)
T ss_dssp ------------HHHHHHHHHHHHHHHHHTT------EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHHHHHHH
T ss_pred ccCCCCChhhcchHHhHHHHHHHHHHHHhcCC---CcchhhhhhhhHHHHHHHhhcc-C-cceEEEEeeeeeHHHHHHHH
Confidence 44322223333455678899999999998885 7799999999999999999854 4 5666666688773210
Q ss_pred ----CCCccccc--------ccccccHHHHH----------hcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHH
Q 011049 385 ----PFGFQTEF--------RTLWEATNVYI----------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDA 442 (494)
Q Consensus 385 ----~~~~~~~~--------~~~~~~~~~~~----------~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~ 442 (494)
......+. +.. -..+.|. ..|....++.+.+|++.+++++|..|. ..+..++...
T Consensus 144 l~~Dyl~~~i~~lp~dldfeGh~-l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~--q~eV~~~~~~ 220 (294)
T PF02273_consen 144 LGYDYLQLPIEQLPEDLDFEGHN-LGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVK--QSEVEELLDN 220 (294)
T ss_dssp HSS-GGGS-GGG--SEEEETTEE-EEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS---HHHHHHHHTT
T ss_pred hccchhhcchhhCCCcccccccc-cchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCcccc--HHHHHHHHHh
Confidence 00000000 000 0111111 113455677889999999999999986 6655555554
Q ss_pred HHhCCCcEEEEEcCCCCCccC
Q 011049 443 LKGHGALSRLVLLPFEHHVYA 463 (494)
Q Consensus 443 l~~~g~~~~~~~~~~~~H~~~ 463 (494)
+.. ..+++...+|..|.+.
T Consensus 221 ~~s--~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 221 INS--NKCKLYSLPGSSHDLG 239 (294)
T ss_dssp -TT----EEEEEETT-SS-TT
T ss_pred cCC--CceeEEEecCccchhh
Confidence 433 3588999999999886
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.6e-08 Score=91.42 Aligned_cols=203 Identities=16% Similarity=0.098 Sum_probs=118.3
Q ss_pred CCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEEeCCCCCCCCCCCCCCC-chhHHHHHHHHHHH
Q 011049 254 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDKLPN-DRFVEQLVSSAEAA 331 (494)
Q Consensus 254 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g~~~~~-~~~~~~~~~d~~~~ 331 (494)
+.|.++.+||- .|+...|... ...|+. .|-.|+.++.| -+|.+..- .-....+.+|+...
T Consensus 51 ~~Pp~i~lHGl-----------~GS~~Nw~sv----~k~Ls~~l~~~v~~vd~R---nHG~Sp~~~~h~~~~ma~dv~~F 112 (315)
T KOG2382|consen 51 RAPPAIILHGL-----------LGSKENWRSV----AKNLSRKLGRDVYAVDVR---NHGSSPKITVHNYEAMAEDVKLF 112 (315)
T ss_pred CCCceEEeccc-----------ccCCCCHHHH----HHHhcccccCceEEEecc---cCCCCccccccCHHHHHHHHHHH
Confidence 37889999994 3443444332 223333 34456654443 33433221 11146778888888
Q ss_pred HHHHHHcCCCCCCcEEEEecChHH-HHHHHHHHhCCCceeEEEe--CCC-CCCCC---------------CC---CCC--
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGA-FMTAHLLAHAPHLFCCGIA--RSG-SYNKT---------------LT---PFG-- 387 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG-~~a~~~~~~~p~~~~a~v~--~~~-~~~~~---------------~~---~~~-- 387 (494)
++........ .++.++|||||| -+++..+...|++..-+|. ++| .+... .. ..+
T Consensus 113 i~~v~~~~~~--~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rk 190 (315)
T KOG2382|consen 113 IDGVGGSTRL--DPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRK 190 (315)
T ss_pred HHHccccccc--CCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHH
Confidence 8877654332 568999999999 7777777888887655554 333 11100 00 000
Q ss_pred ----------------------cc---ccccccccc-----HHHHH---hcCccccc--cCCCCCEEEEecCCCCCCCCC
Q 011049 388 ----------------------FQ---TEFRTLWEA-----TNVYI---EMSPITHA--NKIKKPILIIHGEVDDKVGLF 432 (494)
Q Consensus 388 ----------------------~~---~~~~~~~~~-----~~~~~---~~sp~~~~--~~~~~P~li~~G~~D~~v~~~ 432 (494)
+. ......|.. .+.+. ..+.-..+ .....|+|+++|.++..++
T Consensus 191 e~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~-- 268 (315)
T KOG2382|consen 191 EALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVP-- 268 (315)
T ss_pred HHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcC--
Confidence 00 000011210 11121 22222222 4456899999999999997
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 433 PMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 433 ~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
.++-.++.+.+ ..++++.++++||+.. .++++.+.+.+.+|+.++.
T Consensus 269 ~~~~~~~~~~f----p~~e~~~ld~aGHwVh-~E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 269 DEHYPRMEKIF----PNVEVHELDEAGHWVH-LEKPEEFIESISEFLEEPE 314 (315)
T ss_pred hhHHHHHHHhc----cchheeecccCCceee-cCCHHHHHHHHHHHhcccC
Confidence 55444444433 3489999999999988 4888999999999987653
|
|
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.1e-07 Score=75.69 Aligned_cols=168 Identities=15% Similarity=0.117 Sum_probs=95.9
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeC--CCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG--PSIPIIGEGDKLPNDRFVEQLVSSAEAAV 332 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~--~~~~~~g~g~~~~~~~~~~~~~~d~~~~v 332 (494)
.-+||+.||.|.+. + +......+..|+.+|+.|... +|+-.+-.|...+.... .......+.++
T Consensus 14 ~~tilLaHGAGasm-----------d--St~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~-~t~~~~~~~~~ 79 (213)
T COG3571 14 PVTILLAHGAGASM-----------D--STSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGS-GTLNPEYIVAI 79 (213)
T ss_pred CEEEEEecCCCCCC-----------C--CHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCcc-ccCCHHHHHHH
Confidence 34678899875221 1 111223455788999999862 33222222321111000 11111223344
Q ss_pred HHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCcccccc
Q 011049 333 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHAN 412 (494)
Q Consensus 333 ~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~ 412 (494)
-.|.+. .+..++.+.|+||||-++.+++..--..+.+.+++.=.+. +.+- ++.. -..++.
T Consensus 80 aql~~~--l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfh----ppGK----------Pe~~----Rt~HL~ 139 (213)
T COG3571 80 AQLRAG--LAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFH----PPGK----------PEQL----RTEHLT 139 (213)
T ss_pred HHHHhc--ccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccC----CCCC----------cccc----hhhhcc
Confidence 445554 3456899999999999998887654344666666532211 1111 1111 123677
Q ss_pred CCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccC
Q 011049 413 KIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA 463 (494)
Q Consensus 413 ~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 463 (494)
.+++|+||.||+.|+.-. .++. ....- ..+++++++.++.|.+.
T Consensus 140 gl~tPtli~qGtrD~fGt--r~~V---a~y~l--s~~iev~wl~~adHDLk 183 (213)
T COG3571 140 GLKTPTLITQGTRDEFGT--RDEV---AGYAL--SDPIEVVWLEDADHDLK 183 (213)
T ss_pred CCCCCeEEeecccccccC--HHHH---Hhhhc--CCceEEEEeccCccccc
Confidence 889999999999999865 4443 22222 35689999999999864
|
|
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=98.90 E-value=7.7e-08 Score=82.27 Aligned_cols=133 Identities=12% Similarity=0.107 Sum_probs=76.3
Q ss_pred HHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC---CCc---ccccccccccHHHHH
Q 011049 330 AAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP---FGF---QTEFRTLWEATNVYI 403 (494)
Q Consensus 330 ~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~ 403 (494)
+.++.++++. .++.+.++|.|+||+.|.+++.+++ +++ |+++|.+.....- .+. .......+-....+.
T Consensus 47 ~~l~~~i~~~--~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~ 121 (187)
T PF05728_consen 47 AQLEQLIEEL--KPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIE 121 (187)
T ss_pred HHHHHHHHhC--CCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhhh
Confidence 3344444443 2345999999999999999999883 445 7778876521100 000 000000111112222
Q ss_pred hcCccccc-cCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 404 EMSPITHA-NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 404 ~~sp~~~~-~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
....+... ..-..++++++++.|.+++ +.++. +..+. +...+.+|.+|.+.. .++.+..+.+|+
T Consensus 122 ~l~~l~~~~~~~~~~~lvll~~~DEvLd--~~~a~---~~~~~----~~~~i~~ggdH~f~~---f~~~l~~i~~f~ 186 (187)
T PF05728_consen 122 ELKALEVPYPTNPERYLVLLQTGDEVLD--YREAV---AKYRG----CAQIIEEGGDHSFQD---FEEYLPQIIAFL 186 (187)
T ss_pred hcceEeccccCCCccEEEEEecCCcccC--HHHHH---HHhcC----ceEEEEeCCCCCCcc---HHHHHHHHHHhh
Confidence 22222211 1224689999999999988 65543 33332 344566888999864 557778888886
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.6e-07 Score=87.66 Aligned_cols=201 Identities=15% Similarity=0.140 Sum_probs=111.7
Q ss_pred EEEEEEe-CCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCC
Q 011049 237 LTATLYL-PPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL 315 (494)
Q Consensus 237 ~~~~l~~-P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~ 315 (494)
-..|++. |..+.++. -|+||++||||+.-... +..+..+ .....+.. ..+++..+|. ....+ .
T Consensus 106 ~s~Wlvk~P~~~~pk~---DpVlIYlHGGGY~l~~~-------p~qi~~L--~~i~~~l~-~~SILvLDYs-Lt~~~--~ 169 (374)
T PF10340_consen 106 QSYWLVKAPNRFKPKS---DPVLIYLHGGGYFLGTT-------PSQIEFL--LNIYKLLP-EVSILVLDYS-LTSSD--E 169 (374)
T ss_pred ceEEEEeCCcccCCCC---CcEEEEEcCCeeEecCC-------HHHHHHH--HHHHHHcC-CCeEEEEecc-ccccc--c
Confidence 3468887 76655543 49999999998532110 0001000 00111122 3456655552 21100 1
Q ss_pred CCchhHHHHHHHHHHHHHHHH-HcCCCCCCcEEEEecChHHHHHHHHHHhCC-----CceeEEEeCCCCCCCCCCCC---
Q 011049 316 PNDRFVEQLVSSAEAAVEEVV-RRGVADPSRIAVGGHSYGAFMTAHLLAHAP-----HLFCCGIARSGSYNKTLTPF--- 386 (494)
Q Consensus 316 ~~~~~~~~~~~d~~~~v~~l~-~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p-----~~~~a~v~~~~~~~~~~~~~--- 386 (494)
.+..+. ....++.+..++|. +.+. ++|.++|-|+||.+++.++.+-. -.-+.+|+++|+.+......
T Consensus 170 ~~~~yP-tQL~qlv~~Y~~Lv~~~G~---~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~~~~~~~~ 245 (374)
T PF10340_consen 170 HGHKYP-TQLRQLVATYDYLVESEGN---KNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLVPQDSQEG 245 (374)
T ss_pred CCCcCc-hHHHHHHHHHHHHHhccCC---CeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCcCCCCCCC
Confidence 122232 33667788999999 5553 78999999999999988765421 12489999999987542110
Q ss_pred C-cc-ccccc--cc----ccHHHHH---------hcCcccccc---------C--CCCCEEEEecCCCCCCCCCHHHHHH
Q 011049 387 G-FQ-TEFRT--LW----EATNVYI---------EMSPITHAN---------K--IKKPILIIHGEVDDKVGLFPMQAER 438 (494)
Q Consensus 387 ~-~~-~~~~~--~~----~~~~~~~---------~~sp~~~~~---------~--~~~P~li~~G~~D~~v~~~~~~~~~ 438 (494)
. +. .+... .+ ...+.|. ...|..... . -+.-++++.|+++-. .++..+
T Consensus 246 ~~~~~n~~~D~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I~~~~~vfVi~Ge~Evf----rddI~~ 321 (374)
T PF10340_consen 246 SSYHDNEKRDMLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDILKKYSVFVIYGEDEVF----RDDILE 321 (374)
T ss_pred ccccccccccccchhhHHHHHHhhccccccccccccCCccCcccCCChhHHHHhccCCcEEEEECCcccc----HHHHHH
Confidence 0 00 00000 00 0001111 111111111 1 135799999999876 788999
Q ss_pred HHHHHHhCCC-----cEEEEEcCCCCCc
Q 011049 439 FFDALKGHGA-----LSRLVLLPFEHHV 461 (494)
Q Consensus 439 ~~~~l~~~g~-----~~~~~~~~~~~H~ 461 (494)
+.+.+.+.+. ..+..+.+++.|-
T Consensus 322 ~~~~~~~~~~~~~~~~~nv~~~~~G~Hi 349 (374)
T PF10340_consen 322 WAKKLNDVKPNKFSNSNNVYIDEGGIHI 349 (374)
T ss_pred HHHHHhhcCccccCCcceEEEecCCccc
Confidence 9999986543 3677888888885
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=98.88 E-value=3e-09 Score=109.06 Aligned_cols=130 Identities=19% Similarity=0.165 Sum_probs=83.6
Q ss_pred eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC-CCCCCCC
Q 011049 236 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP-IIGEGDK 314 (494)
Q Consensus 236 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~-~~g~g~~ 314 (494)
=|..-+|.|....... ++||+||+|||++..++... ..+ .....++.++++||.++||- ..|+-..
T Consensus 108 CL~LnI~~P~~~~~~~--~lPV~v~ihGG~f~~G~~~~------~~~-----~~~~~~~~~~vivVt~nYRlg~~Gfl~~ 174 (535)
T PF00135_consen 108 CLYLNIYTPSNASSNS--KLPVMVWIHGGGFMFGSGSF------PPY-----DGASLAASKDVIVVTINYRLGAFGFLSL 174 (535)
T ss_dssp --EEEEEEETSSSSTT--SEEEEEEE--STTTSSCTTS------GGG-----HTHHHHHHHTSEEEEE----HHHHH-BS
T ss_pred HHHHhhhhcccccccc--ccceEEEeecccccCCCccc------ccc-----cccccccCCCEEEEEecccccccccccc
Confidence 3788899998865442 49999999999876544310 011 22335678999999988872 2232111
Q ss_pred CCCch-hHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHhC--CCceeEEEeCCCC
Q 011049 315 LPNDR-FVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGS 378 (494)
Q Consensus 315 ~~~~~-~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~~--p~~~~a~v~~~~~ 378 (494)
..... ..+....|...|++|+.++ ..-||++|-|+|+|.||..+..++... ..+|+.+|+.+|.
T Consensus 175 ~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 175 GDLDAPSGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp SSTTSHBSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred cccccCchhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 11111 1355688999999999886 235999999999999999998777652 2589999999984
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.1e-08 Score=85.02 Aligned_cols=182 Identities=16% Similarity=0.178 Sum_probs=111.1
Q ss_pred eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCC
Q 011049 236 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL 315 (494)
Q Consensus 236 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~ 315 (494)
..+..++.|.. ++.+|+|+++||..- +..++....+.+++.||+|+++......+-
T Consensus 32 PkpLlI~tP~~-----~G~yPVilF~HG~~l---------------~ns~Ys~lL~HIASHGfIVVAPQl~~~~~p---- 87 (307)
T PF07224_consen 32 PKPLLIVTPSE-----AGTYPVILFLHGFNL---------------YNSFYSQLLAHIASHGFIVVAPQLYTLFPP---- 87 (307)
T ss_pred CCCeEEecCCc-----CCCccEEEEeechhh---------------hhHHHHHHHHHHhhcCeEEEechhhcccCC----
Confidence 45677888875 566999999999421 122223345577899999999665433221
Q ss_pred CCchhHHHHHHHHHHHHHHHHHc--C------CCCCCcEEEEecChHHHHHHHHHHhCC--CceeEEEeCCCCCCCCCCC
Q 011049 316 PNDRFVEQLVSSAEAAVEEVVRR--G------VADPSRIAVGGHSYGAFMTAHLLAHAP--HLFCCGIARSGSYNKTLTP 385 (494)
Q Consensus 316 ~~~~~~~~~~~d~~~~v~~l~~~--~------~~d~~ri~i~G~S~GG~~a~~~~~~~p--~~~~a~v~~~~~~~~~~~~ 385 (494)
...+.+++..+.++||.+. . ..+-++++++|||.||-.|..+|..+. -.|.+.|.+.|+.-.....
T Consensus 88 ----~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~k~~ 163 (307)
T PF07224_consen 88 ----DGQDEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTSKGK 163 (307)
T ss_pred ----CchHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCCCCC
Confidence 1234567778888888753 1 135679999999999999999998763 2588888888874321100
Q ss_pred CCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCC-----CCCCCCHH--HHHHHHHHHHhCCCcEEEEEcCCC
Q 011049 386 FGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVD-----DKVGLFPM--QAERFFDALKGHGALSRLVLLPFE 458 (494)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D-----~~v~~~~~--~~~~~~~~l~~~g~~~~~~~~~~~ 458 (494)
++ .+.. ..+.|.. -++..|+++|-...- -..||.+. +-++++...+ .++-..+-.+-
T Consensus 164 -------~t---~P~i-Lty~p~S--F~l~iPv~VIGtGLg~~~~~~~~~CaP~gvnH~eFf~eCk---~p~~hfV~~dY 227 (307)
T PF07224_consen 164 -------QT---PPPI-LTYVPQS--FDLDIPVLVIGTGLGPKRNPLFPPCAPDGVNHEEFFNECK---PPCAHFVAKDY 227 (307)
T ss_pred -------CC---CCCe-eecCCcc--cccCCceEEEecCcCccccCCCCCCCCCCcCHHHHHHhhc---ccceeeeeccc
Confidence 00 0000 0011111 134589998875443 11233233 3467887776 34566666777
Q ss_pred CCc
Q 011049 459 HHV 461 (494)
Q Consensus 459 ~H~ 461 (494)
||.
T Consensus 228 GHm 230 (307)
T PF07224_consen 228 GHM 230 (307)
T ss_pred ccc
Confidence 884
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.2e-07 Score=77.97 Aligned_cols=225 Identities=16% Similarity=0.110 Sum_probs=126.2
Q ss_pred EEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCC
Q 011049 227 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI 306 (494)
Q Consensus 227 ~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~ 306 (494)
..++..||..+.+..|.-.+. .+-.+.+-|+. +- ...+...++...+.+||.|+..++|
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~~-------~~g~~~va~a~-----------Gv---~~~fYRrfA~~a~~~Gf~Vlt~dyR 66 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADGK-------ASGRLVVAGAT-----------GV---GQYFYRRFAAAAAKAGFEVLTFDYR 66 (281)
T ss_pred cccccCCCccCccccccCCCC-------CCCcEEecccC-----------Cc---chhHhHHHHHHhhccCceEEEEecc
Confidence 557788999999998854431 23222222221 11 1122334566677899999997777
Q ss_pred CCCCCCCCC---CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC--CCC
Q 011049 307 PIIGEGDKL---PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS--YNK 381 (494)
Q Consensus 307 ~~~g~g~~~---~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~--~~~ 381 (494)
|..+..... ..-.+.+-...|+.++++++.+.. -.-.+..+|||+||.+.. ++.+++..-.++|..++. .-+
T Consensus 67 G~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~--~~~P~y~vgHS~GGqa~g-L~~~~~k~~a~~vfG~gagwsg~ 143 (281)
T COG4757 67 GIGQSRPASLSGSQWRYLDWARLDFPAALAALKKAL--PGHPLYFVGHSFGGQALG-LLGQHPKYAAFAVFGSGAGWSGW 143 (281)
T ss_pred cccCCCccccccCccchhhhhhcchHHHHHHHHhhC--CCCceEEeeccccceeec-ccccCcccceeeEeccccccccc
Confidence 653322111 113344555789999999998743 235689999999998775 444554222222222211 110
Q ss_pred C---------------CC---------CCC---ccccc-ccccccHHHH------HhcCccc-----cccCCCCCEEEEe
Q 011049 382 T---------------LT---------PFG---FQTEF-RTLWEATNVY------IEMSPIT-----HANKIKKPILIIH 422 (494)
Q Consensus 382 ~---------------~~---------~~~---~~~~~-~~~~~~~~~~------~~~sp~~-----~~~~~~~P~li~~ 422 (494)
. .. ++. +.... .+...+...| ...+|.. ..+++.+|++++.
T Consensus 144 m~~~~~l~~~~l~~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~ 223 (281)
T COG4757 144 MGLRERLGAVLLWNLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSR 223 (281)
T ss_pred hhhhhcccceeeccccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeec
Confidence 0 00 000 00000 0000111111 1122322 2456789999999
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCC----CCccCCcccHHHHHHHHHHHH
Q 011049 423 GEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFE----HHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 423 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~----~H~~~~~~~~~~~~~~~~~fl 479 (494)
..+|+.+| +...+.+.+..+++ +.++..++.. ||.-...+..+....++++||
T Consensus 224 ~~DD~w~P--~As~d~f~~~y~nA--pl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 224 ALDDPWAP--PASRDAFASFYRNA--PLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred cCCCCcCC--HHHHHHHHHhhhcC--cccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 99999987 77777887777754 4567766654 786333344467778888886
|
|
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=98.69 E-value=8.2e-07 Score=87.43 Aligned_cols=87 Identities=13% Similarity=-0.010 Sum_probs=61.6
Q ss_pred hhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHH----HHH
Q 011049 288 TSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAH----LLA 363 (494)
Q Consensus 288 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~----~~~ 363 (494)
.....|+++||.|+.++-+. -+.+...- ..++.++.+.++|+.+.+.. ..++|-++|+|+||.+++. +++
T Consensus 238 SlVr~lv~qG~~VflIsW~n---P~~~~r~~-~ldDYv~~i~~Ald~V~~~t--G~~~vnl~GyC~GGtl~a~~~a~~aA 311 (560)
T TIGR01839 238 SFVQYCLKNQLQVFIISWRN---PDKAHREW-GLSTYVDALKEAVDAVRAIT--GSRDLNLLGACAGGLTCAALVGHLQA 311 (560)
T ss_pred hHHHHHHHcCCeEEEEeCCC---CChhhcCC-CHHHHHHHHHHHHHHHHHhc--CCCCeeEEEECcchHHHHHHHHHHHh
Confidence 35668899999999855321 12222121 12444567888888887763 3578999999999999986 677
Q ss_pred hCCC-ceeEEEeCCCCCC
Q 011049 364 HAPH-LFCCGIARSGSYN 380 (494)
Q Consensus 364 ~~p~-~~~a~v~~~~~~~ 380 (494)
.+++ +++.++.+....|
T Consensus 312 ~~~~~~V~sltllatplD 329 (560)
T TIGR01839 312 LGQLRKVNSLTYLVSLLD 329 (560)
T ss_pred cCCCCceeeEEeeecccc
Confidence 7775 7999888777665
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.9e-07 Score=82.71 Aligned_cols=102 Identities=25% Similarity=0.208 Sum_probs=60.7
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC--------CCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHH
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA--------PHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYI 403 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~--------p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (494)
.+++.+++- -.+|+|+|.||.+|..++... ...||.+|.++|.......
T Consensus 94 ~~~i~~~GP----fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~------------------- 150 (212)
T PF03959_consen 94 RDYIEENGP----FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD------------------- 150 (212)
T ss_dssp HHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE--------------------
T ss_pred HHHHHhcCC----eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh-------------------
Confidence 344445553 359999999999999888642 1357999999886321000
Q ss_pred hcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccC
Q 011049 404 EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA 463 (494)
Q Consensus 404 ~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 463 (494)
........++++|+|.++|++|..++ ...++.+++..... .+++..++ ||.+-
T Consensus 151 -~~~~~~~~~i~iPtlHv~G~~D~~~~--~~~s~~L~~~~~~~---~~v~~h~g-GH~vP 203 (212)
T PF03959_consen 151 -YQELYDEPKISIPTLHVIGENDPVVP--PERSEALAEMFDPD---ARVIEHDG-GHHVP 203 (212)
T ss_dssp -GTTTT--TT---EEEEEEETT-SSS---HHHHHHHHHHHHHH---EEEEEESS-SSS--
T ss_pred -hhhhhccccCCCCeEEEEeCCCCCcc--hHHHHHHHHhccCC---cEEEEECC-CCcCc
Confidence 01111335678999999999999997 88999999999875 56777766 78764
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=98.64 E-value=6.9e-06 Score=72.83 Aligned_cols=128 Identities=16% Similarity=0.179 Sum_probs=79.6
Q ss_pred EEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCC
Q 011049 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 304 (494)
Q Consensus 225 ~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 304 (494)
..+.+.+.+|..+...-.+-..-.. ..+..+||-+||.| |+...|. +....|.+.|+.++..|
T Consensus 7 ~~~k~~~~~~~~~~~~a~y~D~~~~--gs~~gTVv~~hGsP-----------GSH~DFk----Yi~~~l~~~~iR~I~iN 69 (297)
T PF06342_consen 7 KLVKFQAENGKIVTVQAVYEDSLPS--GSPLGTVVAFHGSP-----------GSHNDFK----YIRPPLDEAGIRFIGIN 69 (297)
T ss_pred EEEEcccccCceEEEEEEEEecCCC--CCCceeEEEecCCC-----------CCccchh----hhhhHHHHcCeEEEEeC
Confidence 4456666677655444333222111 23467999999987 4434453 34568889999999977
Q ss_pred CCCCCCCCCCC--CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC
Q 011049 305 SIPIIGEGDKL--PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 305 ~~~~~g~g~~~--~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 378 (494)
+. |+|... ....+.+. +-...++.|.++-.++ +++.++|||.|+-.|+.++..+| ..++++++|+
T Consensus 70 ~P---Gf~~t~~~~~~~~~n~---er~~~~~~ll~~l~i~-~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~ 136 (297)
T PF06342_consen 70 YP---GFGFTPGYPDQQYTNE---ERQNFVNALLDELGIK-GKLIFLGHSRGCENALQLAVTHP--LHGLVLINPP 136 (297)
T ss_pred CC---CCCCCCCCcccccChH---HHHHHHHHHHHHcCCC-CceEEEEeccchHHHHHHHhcCc--cceEEEecCC
Confidence 63 333332 22222221 2234445555554455 78999999999999999999985 3577777765
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.62 E-value=2.8e-07 Score=86.65 Aligned_cols=79 Identities=23% Similarity=0.432 Sum_probs=64.6
Q ss_pred HHHhcCccccccCCC-CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccH--HHHHHHHHH
Q 011049 401 VYIEMSPITHANKIK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENV--MHVIWETDR 477 (494)
Q Consensus 401 ~~~~~sp~~~~~~~~-~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~--~~~~~~~~~ 477 (494)
.+...++...+.++. +|+|++||.+|..|| ..++..++++.+.. +.+..++++.+|........ ...+.++.+
T Consensus 217 ~~~~~d~~~~~~~i~~~P~l~~~G~~D~~vp--~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~ 292 (299)
T COG1073 217 LLLLLDPFDDAEKISPRPVLLVHGERDEVVP--LRDAEDLYEAARER--PKKLLFVPGGGHIDLYDNPPAVEQALDKLAE 292 (299)
T ss_pred hhccCcchhhHhhcCCcceEEEecCCCcccc--hhhhHHHHhhhccC--CceEEEecCCccccccCccHHHHHHHHHHHH
Confidence 356667777788887 799999999999998 99999999998875 56888899999987643333 478889999
Q ss_pred HHHHhc
Q 011049 478 WLQKYC 483 (494)
Q Consensus 478 fl~~~l 483 (494)
||.+++
T Consensus 293 f~~~~l 298 (299)
T COG1073 293 FLERHL 298 (299)
T ss_pred HHHHhc
Confidence 999886
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.62 E-value=7.1e-07 Score=77.35 Aligned_cols=148 Identities=16% Similarity=0.159 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHcCC--CCCCcEEEEecChHHHHHHHHHHhCCC---ceeEEE---eCCCCCCCCCCCCCcc-------
Q 011049 325 VSSAEAAVEEVVRRGV--ADPSRIAVGGHSYGAFMTAHLLAHAPH---LFCCGI---ARSGSYNKTLTPFGFQ------- 389 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~--~d~~ri~i~G~S~GG~~a~~~~~~~p~---~~~a~v---~~~~~~~~~~~~~~~~------- 389 (494)
..|+.+.++.+...-. .-....+++||||||.+|.-+|.+.-. ...+.. ..+|..+.........
T Consensus 53 ~~di~~Lad~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~ 132 (244)
T COG3208 53 LTDIESLADELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLAD 132 (244)
T ss_pred cccHHHHHHHHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHH
Confidence 3344444444444321 122579999999999999998875411 122222 2223221110000000
Q ss_pred --cccc---cccccHHHHHhcCccc-----------c--ccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEE
Q 011049 390 --TEFR---TLWEATNVYIEMSPIT-----------H--ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSR 451 (494)
Q Consensus 390 --~~~~---~~~~~~~~~~~~sp~~-----------~--~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~ 451 (494)
...+ ..+++++.+.-.-|+. + -..+.+|+.++.|++|..|. .++...+.+.. +...+
T Consensus 133 l~~lgG~p~e~led~El~~l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs--~~~~~~W~~~t---~~~f~ 207 (244)
T COG3208 133 LVDLGGTPPELLEDPELMALFLPILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVS--RDELGAWREHT---KGDFT 207 (244)
T ss_pred HHHhCCCChHHhcCHHHHHHHHHHHHHHHHHhcccccCCCCCcCcceEEeccCcchhcc--HHHHHHHHHhh---cCCce
Confidence 0011 1244554433322221 1 13577999999999999985 44444444433 34689
Q ss_pred EEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 452 LVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 452 ~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
+.+|+| +|.+.. .+...+...+.+.+
T Consensus 208 l~~fdG-gHFfl~-~~~~~v~~~i~~~l 233 (244)
T COG3208 208 LRVFDG-GHFFLN-QQREEVLARLEQHL 233 (244)
T ss_pred EEEecC-cceehh-hhHHHHHHHHHHHh
Confidence 999988 898763 44444444444444
|
|
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.7e-07 Score=85.08 Aligned_cols=109 Identities=10% Similarity=-0.062 Sum_probs=72.5
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHH-hCCeEEEeCCCCCCCCCCCCCCC--chhHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~ 331 (494)
.|++|++||... +.. ..+.......++ ..+|.|+++|..+. +..... ........+++...
T Consensus 36 ~p~vilIHG~~~-----------~~~--~~~~~~l~~~ll~~~~~nVi~vD~~~~---~~~~y~~a~~~~~~v~~~la~~ 99 (275)
T cd00707 36 RPTRFIIHGWTS-----------SGE--ESWISDLRKAYLSRGDYNVIVVDWGRG---ANPNYPQAVNNTRVVGAELAKF 99 (275)
T ss_pred CCcEEEEcCCCC-----------CCC--CcHHHHHHHHHHhcCCCEEEEEECccc---cccChHHHHHhHHHHHHHHHHH
Confidence 589999999531 110 011112222334 46899999776432 111110 11122335677888
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 379 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 379 (494)
+++|.++..++.++|.++|||+||+++..++.+.|++++.++++.|..
T Consensus 100 l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~ 147 (275)
T cd00707 100 LDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAG 147 (275)
T ss_pred HHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCc
Confidence 888888755677899999999999999999999999999999988764
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=6.5e-07 Score=90.68 Aligned_cols=82 Identities=12% Similarity=-0.007 Sum_probs=60.7
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeee--------eccceEEEEEcCCCCCCCceEeeecc
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY--------KTSQTRTWLVCPGSKDVAPRVLFDRV 87 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~--------~~~~~~~~~~~~~~g~~~~~~lt~~~ 87 (494)
++.+||+.+. ++..+++|.++. ...|+|||||++|+|.++. .....++|+++++++ +.++ ...
T Consensus 377 ~~s~Lwv~~~----gg~~~~lt~g~~-~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~g--e~~~--~~~ 447 (591)
T PRK13616 377 PASSLWVGPL----GGVAVQVLEGHS-LTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDAS--AVAS--RVP 447 (591)
T ss_pred cceEEEEEeC----CCcceeeecCCC-CCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCc--hhhh--ccC
Confidence 6779999987 456688888864 8899999999999998642 112468999999887 6655 222
Q ss_pred cccccCCCCCCceeeCCCCCEEEEEE
Q 011049 88 FENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 88 ~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
+.. ..+. |||||++|+|..
T Consensus 448 g~I-----ssl~--wSpDG~RiA~i~ 466 (591)
T PRK13616 448 GPI-----SELQ--LSRDGVRAAMII 466 (591)
T ss_pred CCc-----CeEE--ECCCCCEEEEEE
Confidence 211 3334 999999999987
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.2e-06 Score=78.95 Aligned_cols=65 Identities=22% Similarity=0.099 Sum_probs=47.9
Q ss_pred ccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 411 ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 411 ~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
+++++.|+|++.-+.|.+.| +.+.+++.+.|+..+. -..+-...||.-+..+ ...+...+..||.
T Consensus 302 l~~i~~~~lv~gi~sD~lfp--~~~~~~~~~~L~~~~~--~~~i~S~~GHDaFL~e-~~~~~~~i~~fL~ 366 (368)
T COG2021 302 LARIKAPVLVVGITSDWLFP--PELQRALAEALPAAGA--LREIDSPYGHDAFLVE-SEAVGPLIRKFLA 366 (368)
T ss_pred HhcCccCEEEEEecccccCC--HHHHHHHHHhccccCc--eEEecCCCCchhhhcc-hhhhhHHHHHHhh
Confidence 67799999999999999998 9999999999998775 2233446789744322 2234456666664
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.3e-06 Score=71.78 Aligned_cols=172 Identities=16% Similarity=0.125 Sum_probs=105.6
Q ss_pred cCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHH
Q 011049 282 FSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL 361 (494)
Q Consensus 282 ~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~ 361 (494)
|..+....+..|+++|+.|+-.|..-+ +......++...|+.+.+++..++.. .+++.++|.|+|+-+...+
T Consensus 14 w~~~d~~~a~~l~~~G~~VvGvdsl~Y------fw~~rtP~~~a~Dl~~~i~~y~~~w~--~~~vvLiGYSFGADvlP~~ 85 (192)
T PF06057_consen 14 WRDLDKQIAEALAKQGVPVVGVDSLRY------FWSERTPEQTAADLARIIRHYRARWG--RKRVVLIGYSFGADVLPFI 85 (192)
T ss_pred chhhhHHHHHHHHHCCCeEEEechHHH------HhhhCCHHHHHHHHHHHHHHHHHHhC--CceEEEEeecCCchhHHHH
Confidence 554455667789999999998554322 12233456778999999988877743 4899999999999888888
Q ss_pred HHhCCC----ceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCC-CCEEEEecCCCCCCCCCHHHH
Q 011049 362 LAHAPH----LFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIK-KPILIIHGEVDDKVGLFPMQA 436 (494)
Q Consensus 362 ~~~~p~----~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~-~P~li~~G~~D~~v~~~~~~~ 436 (494)
..+-|. +++.+++++|-.... |+......+.....-....+...+.++. .|++.++|++|.-..||
T Consensus 86 ~nrLp~~~r~~v~~v~Ll~p~~~~d-----Feihv~~wlg~~~~~~~~~~~pei~~l~~~~v~CiyG~~E~d~~cp---- 156 (192)
T PF06057_consen 86 YNRLPAALRARVAQVVLLSPSTTAD-----FEIHVSGWLGMGGDDAAYPVIPEIAKLPPAPVQCIYGEDEDDSLCP---- 156 (192)
T ss_pred HhhCCHHHHhheeEEEEeccCCcce-----EEEEhhhhcCCCCCcccCCchHHHHhCCCCeEEEEEcCCCCCCcCc----
Confidence 877774 667777776642211 1100000000000001123445566665 69999999987654332
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 437 ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 437 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
.|+. ..++.+..|| ||.|. .+.....+.|++-++
T Consensus 157 -----~l~~--~~~~~i~lpG-gHHfd--~dy~~La~~Il~~l~ 190 (192)
T PF06057_consen 157 -----SLRQ--PGVEVIALPG-GHHFD--GDYDALAKRILDALK 190 (192)
T ss_pred -----cccC--CCcEEEEcCC-CcCCC--CCHHHHHHHHHHHHh
Confidence 2333 3468889999 56565 344455555555443
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.5e-06 Score=84.10 Aligned_cols=109 Identities=9% Similarity=-0.031 Sum_probs=72.3
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh--CCeEEEeCCCCCCCCCCCCCCC--chhHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA--RRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEA 330 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~ 330 (494)
.|++|++||.... + .+..+.......|.. ..|.|+++|-+ |+|.+... .........++.+
T Consensus 41 ~ptvIlIHG~~~s---------~---~~~~w~~~l~~al~~~~~d~nVI~VDw~---g~g~s~y~~a~~~t~~vg~~la~ 105 (442)
T TIGR03230 41 TKTFIVIHGWTVT---------G---MFESWVPKLVAALYEREPSANVIVVDWL---SRAQQHYPTSAAYTKLVGKDVAK 105 (442)
T ss_pred CCeEEEECCCCcC---------C---cchhhHHHHHHHHHhccCCCEEEEEECC---CcCCCCCccccccHHHHHHHHHH
Confidence 5899999995310 0 011111112223332 36999996654 34433221 2223445567788
Q ss_pred HHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC
Q 011049 331 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 331 ~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 378 (494)
.+++|.+...++.+++.++|||+||.++..++.+.|+++..++.+.|.
T Consensus 106 lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPA 153 (442)
T TIGR03230 106 FVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPA 153 (442)
T ss_pred HHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCC
Confidence 888887654467789999999999999999999999999999998875
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.2e-06 Score=76.70 Aligned_cols=115 Identities=23% Similarity=0.285 Sum_probs=75.0
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEE
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVL 301 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~ 301 (494)
+.+.+.++..++ ++..++..|.. ..-|++++.||+|.+..+ |. .++..+.+ .-..++
T Consensus 49 ekedv~i~~~~~-t~n~Y~t~~~~------t~gpil~l~HG~G~S~LS-----------fA----~~a~el~s~~~~r~~ 106 (343)
T KOG2564|consen 49 EKEDVSIDGSDL-TFNVYLTLPSA------TEGPILLLLHGGGSSALS-----------FA----IFASELKSKIRCRCL 106 (343)
T ss_pred cccccccCCCcc-eEEEEEecCCC------CCccEEEEeecCcccchh-----------HH----HHHHHHHhhcceeEE
Confidence 355666665555 78888888862 126999999998754311 22 23334443 334456
Q ss_pred eCCCCCCCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC
Q 011049 302 AGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~ 365 (494)
+ .+.+|+|++... .-..+.+..|+.+.++++... ++..|.++||||||.++.+.+...
T Consensus 107 a---~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge---~~~~iilVGHSmGGaIav~~a~~k 167 (343)
T KOG2564|consen 107 A---LDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGE---LPPQIILVGHSMGGAIAVHTAASK 167 (343)
T ss_pred E---eeccccCccccCChhhcCHHHHHHHHHHHHHHHhcc---CCCceEEEeccccchhhhhhhhhh
Confidence 6 456677776332 222456788988888887643 346799999999999998887654
|
|
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.5e-06 Score=73.61 Aligned_cols=100 Identities=17% Similarity=0.189 Sum_probs=67.4
Q ss_pred CcEEEEecChHHHHHHHHH-HhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEe
Q 011049 344 SRIAVGGHSYGAFMTAHLL-AHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIH 422 (494)
Q Consensus 344 ~ri~i~G~S~GG~~a~~~~-~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~ 422 (494)
+.+.++|||.|..+++.++ .+...+++++++++|...... ..... ......+.. ...+..|.+++.
T Consensus 55 ~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~--~~~~~----------~~~~f~~~p-~~~l~~~~~via 121 (171)
T PF06821_consen 55 EPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDP--EPFPP----------ELDGFTPLP-RDPLPFPSIVIA 121 (171)
T ss_dssp TTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCH--HCCTC----------GGCCCTTSH-CCHHHCCEEEEE
T ss_pred CCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccc--cchhh----------hccccccCc-ccccCCCeEEEE
Confidence 4699999999999999999 777789999999999633100 00000 000011110 112346779999
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccC
Q 011049 423 GEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA 463 (494)
Q Consensus 423 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 463 (494)
+++|+.|| +..+.++++.|. .++++++++||...
T Consensus 122 S~nDp~vp--~~~a~~~A~~l~-----a~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 122 SDNDPYVP--FERAQRLAQRLG-----AELIILGGGGHFNA 155 (171)
T ss_dssp ETTBSSS---HHHHHHHHHHHT------EEEEETS-TTSSG
T ss_pred cCCCCccC--HHHHHHHHHHcC-----CCeEECCCCCCccc
Confidence 99999998 999999999995 48999999999643
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.1e-06 Score=84.68 Aligned_cols=138 Identities=8% Similarity=0.027 Sum_probs=99.2
Q ss_pred cceeeeccCCCCCCCCCeecccc---cc--ccccceec-CCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKL---DL--RFRSVSWC-DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN 90 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~---~~--~~~~p~ws-pDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~ 90 (494)
+-.|+++|. ..+..+.+... .. ....+.|. +||..+++.+.+++ ..+||+++.+++ ..++||......
T Consensus 209 ~~~l~~~d~---~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G-~~hly~~~~~~~--~~~~lT~G~~~V 282 (353)
T PF00930_consen 209 RLDLVLCDA---STGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDG-YRHLYLYDLDGG--KPRQLTSGDWEV 282 (353)
T ss_dssp EEEEEEEEE---CTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTS-SEEEEEEETTSS--EEEESS-SSS-E
T ss_pred EEEEEEEEC---CCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCC-CcEEEEEccccc--ceeccccCceee
Confidence 337777777 65665544321 11 12244555 99999999998777 899999999998 788999876553
Q ss_pred ccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecC-CCceEEEEeeCcchhhhheeeecc
Q 011049 91 VYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDIN-TGSKERIWESNREKYFETAVALVF 169 (494)
Q Consensus 91 ~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~-~g~~~~l~~~~~~~~~~~~~~~~s 169 (494)
.+ ++.|+++++.|+|.+... .....|||+++++ +++.++|+...+..
T Consensus 283 -----~~-i~~~d~~~~~iyf~a~~~----------------~p~~r~lY~v~~~~~~~~~~LT~~~~~~---------- 330 (353)
T PF00930_consen 283 -----TS-ILGWDEDNNRIYFTANGD----------------NPGERHLYRVSLDSGGEPKCLTCEDGDH---------- 330 (353)
T ss_dssp -----EE-EEEEECTSSEEEEEESSG----------------GTTSBEEEEEETTETTEEEESSTTSSTT----------
T ss_pred -----cc-cceEcCCCCEEEEEecCC----------------CCCceEEEEEEeCCCCCeEeccCCCCCc----------
Confidence 12 445899999999998431 2335589999999 99999998876541
Q ss_pred CCCcccccccCcEEEEEEecCCCCC
Q 011049 170 GQGEEDINLNQLKILTSKESKTEIT 194 (494)
Q Consensus 170 ~~~~~~~s~d~~~~~~~~~s~~~p~ 194 (494)
..+.||||++.++.+++++..|+
T Consensus 331 --~~~~~Spdg~y~v~~~s~~~~P~ 353 (353)
T PF00930_consen 331 --YSASFSPDGKYYVDTYSGPDTPP 353 (353)
T ss_dssp --EEEEE-TTSSEEEEEEESSSSCE
T ss_pred --eEEEECCCCCEEEEEEcCCCCCC
Confidence 14589999999999999998885
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.1e-07 Score=57.44 Aligned_cols=36 Identities=11% Similarity=0.039 Sum_probs=29.7
Q ss_pred eeccccccccccceecCCCceEEEEeeee--ccceEEEE
Q 011049 34 EILHKLDLRFRSVSWCDDSLALVNETWYK--TSQTRTWL 70 (494)
Q Consensus 34 ~~lt~~~~~~~~p~wspDg~~i~f~~~~~--~~~~~~~~ 70 (494)
+++|.....+..|+|||||++|+|++.+. + ..+||+
T Consensus 2 ~~~t~~~~~~~~p~~SpDGk~i~f~s~~~~~g-~~diy~ 39 (39)
T PF07676_consen 2 KQLTNSPGDDGSPAWSPDGKYIYFTSNRNDRG-SFDIYV 39 (39)
T ss_dssp EEES-SSSSEEEEEE-TTSSEEEEEEECT--S-SEEEEE
T ss_pred cCcccCCccccCEEEecCCCEEEEEecCCCCC-CcCEEC
Confidence 57888888899999999999999999877 5 677885
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.7e-06 Score=72.32 Aligned_cols=124 Identities=20% Similarity=0.214 Sum_probs=88.5
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCC--------CceeEEEeCCCCCCCCCCCCCcccccccccccH
Q 011049 328 AEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP--------HLFCCGIARSGSYNKTLTPFGFQTEFRTLWEAT 399 (494)
Q Consensus 328 ~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p--------~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (494)
+....+|+.++|-.| ||+|+|.|+.++..+++... -.|+-+|.++|..-...
T Consensus 92 l~yl~~~i~enGPFD----GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~---------------- 151 (230)
T KOG2551|consen 92 LEYLEDYIKENGPFD----GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSK---------------- 151 (230)
T ss_pred HHHHHHHHHHhCCCc----cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcc----------------
Confidence 455668888898777 79999999999999988221 14688888888532210
Q ss_pred HHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 400 NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 400 ~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
...-..+...+++|.|-+.|+.|.+|| ...+..|++...+. ..+.-|+ ||.+- +...+.+.+.+||
T Consensus 152 ----~~~~~~~~~~i~~PSLHi~G~~D~iv~--~~~s~~L~~~~~~a----~vl~Hpg-gH~VP---~~~~~~~~i~~fi 217 (230)
T KOG2551|consen 152 ----KLDESAYKRPLSTPSLHIFGETDTIVP--SERSEQLAESFKDA----TVLEHPG-GHIVP---NKAKYKEKIADFI 217 (230)
T ss_pred ----hhhhhhhccCCCCCeeEEecccceeec--chHHHHHHHhcCCC----eEEecCC-CccCC---CchHHHHHHHHHH
Confidence 001112344678999999999999998 88899999988765 4444444 89764 3337778888998
Q ss_pred HHhcCC
Q 011049 480 QKYCLS 485 (494)
Q Consensus 480 ~~~l~~ 485 (494)
+..+..
T Consensus 218 ~~~~~~ 223 (230)
T KOG2551|consen 218 QSFLQE 223 (230)
T ss_pred HHHHHh
Confidence 877653
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.41 E-value=6.1e-07 Score=72.25 Aligned_cols=119 Identities=22% Similarity=0.276 Sum_probs=84.0
Q ss_pred HHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCcc
Q 011049 329 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPI 408 (494)
Q Consensus 329 ~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 408 (494)
.+.-.|++++.. |.+..+.|.|+||+.++.+..++|++|..+|+.+|+++....--.+ +++...| .||.
T Consensus 88 ~AyerYv~eEal--pgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardffg~y-------yddDv~y--nsP~ 156 (227)
T COG4947 88 RAYERYVIEEAL--PGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFFGGY-------YDDDVYY--NSPS 156 (227)
T ss_pred HHHHHHHHHhhc--CCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhcccc-------ccCceee--cChh
Confidence 344467877754 4678899999999999999999999999999999998743211111 1111111 4555
Q ss_pred ccccCCC----------CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCcc
Q 011049 409 THANKIK----------KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVY 462 (494)
Q Consensus 409 ~~~~~~~----------~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 462 (494)
.++..+. ..+.+..|..|+.. .+.+++-+.|.++.++..+.+..+..|.+
T Consensus 157 dylpg~~dp~~l~rlr~~~~vfc~G~e~~~L----~~~~~L~~~l~dKqipaw~~~WggvaHdw 216 (227)
T COG4947 157 DYLPGLADPFRLERLRRIDMVFCIGDEDPFL----DNNQHLSRLLSDKQIPAWMHVWGGVAHDW 216 (227)
T ss_pred hhccCCcChHHHHHHhhccEEEEecCccccc----cchHHHHHHhccccccHHHHHhccccccc
Confidence 5544433 44667788888764 45678999999988888887777766654
|
|
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.2e-05 Score=73.58 Aligned_cols=72 Identities=18% Similarity=0.237 Sum_probs=46.2
Q ss_pred eEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCC
Q 011049 298 FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 377 (494)
Q Consensus 298 ~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 377 (494)
|.++.++.+ |+|.+............++...++ ..+ . .++.++|||+||.++..++.++|++++.+|..++
T Consensus 51 ~~~~~~d~~---g~g~s~~~~~~~~~~~~~~~~~~~---~~~-~--~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~ 121 (282)
T COG0596 51 YRVIAPDLR---GHGRSDPAGYSLSAYADDLAALLD---ALG-L--EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGP 121 (282)
T ss_pred eEEEEeccc---CCCCCCcccccHHHHHHHHHHHHH---HhC-C--CceEEEEecccHHHHHHHHHhcchhhheeeEecC
Confidence 888885554 555553000011111333333332 223 2 3499999999999999999999999999988875
Q ss_pred C
Q 011049 378 S 378 (494)
Q Consensus 378 ~ 378 (494)
.
T Consensus 122 ~ 122 (282)
T COG0596 122 A 122 (282)
T ss_pred C
Confidence 4
|
|
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.37 E-value=8.7e-07 Score=79.60 Aligned_cols=180 Identities=13% Similarity=0.110 Sum_probs=104.3
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeC
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 303 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 303 (494)
-++..+++.||.+|...++.-..-+.+.. .-+||..-|.. .|...+-.. .-++.||.|+-.
T Consensus 214 G~R~kiks~dgneiDtmF~d~r~n~~~ng--q~LvIC~EGNA---------------GFYEvG~m~--tP~~lgYsvLGw 274 (517)
T KOG1553|consen 214 GQRLKIKSSDGNEIDTMFLDGRPNQSGNG--QDLVICFEGNA---------------GFYEVGVMN--TPAQLGYSVLGW 274 (517)
T ss_pred CeEEEEeecCCcchhheeecCCCCCCCCC--ceEEEEecCCc---------------cceEeeeec--ChHHhCceeecc
Confidence 45678899999999887775432112111 35677666521 122222111 227899999985
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC
Q 011049 304 PSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL 383 (494)
Q Consensus 304 ~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~ 383 (494)
+.. |++++..- .+..+....+.+++++.+..-...++.|.++|||-||+.++++|..+|+. +++|+-+.+-|...
T Consensus 275 NhP---GFagSTG~-P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPdV-kavvLDAtFDDllp 349 (517)
T KOG1553|consen 275 NHP---GFAGSTGL-PYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPDV-KAVVLDATFDDLLP 349 (517)
T ss_pred CCC---CccccCCC-CCcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCCc-eEEEeecchhhhhh
Confidence 543 44333211 12223344455778888876556778999999999999999999999984 88888766433211
Q ss_pred CCCCcccccccccc-----cHHHHHhcCccccccCCCCCEEEEecCCCCCCC
Q 011049 384 TPFGFQTEFRTLWE-----ATNVYIEMSPITHANKIKKPILIIHGEVDDKVG 430 (494)
Q Consensus 384 ~~~~~~~~~~~~~~-----~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~ 430 (494)
.... ...+.|. ....+....-...+.+.+.|+.+|--.+|.++.
T Consensus 350 --LAl~-rMP~~~~giV~~aiRnh~NLnnaell~ry~GPi~lIRRt~dEIit 398 (517)
T KOG1553|consen 350 --LALF-RMPTFFSGIVEHAIRNHMNLNNAELLARYKGPIRLIRRTQDEIIT 398 (517)
T ss_pred --HHhh-hchHHHHHHHHHHHHHhcccchHHHHHhhcCchhHhhhhhHhhhh
Confidence 0000 0011111 111222223333455567888888877777653
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.9e-05 Score=74.29 Aligned_cols=163 Identities=20% Similarity=0.138 Sum_probs=104.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCC--CCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC-CC--------
Q 011049 319 RFVEQLVSSAEAAVEEVVRRGVAD--PSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-FG-------- 387 (494)
Q Consensus 319 ~~~~~~~~d~~~~v~~l~~~~~~d--~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~-~~-------- 387 (494)
+++-..+.|+..|+.++.+.-.-- .-++.++|+|+|||++..++--.|..|.+++-.++.....+.. .+
T Consensus 157 N~GIMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~l~~I~Gre~~~~~y 236 (403)
T PF11144_consen 157 NFGIMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPPLRYIFGREIDFMKY 236 (403)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccchhheeeeeecCcccc
Confidence 344455789999999998863222 3489999999999999999999999999999887764421100 00
Q ss_pred -----c--------ccccccccccH---------HHHHhcCcc--cc---ccCC--CCCEEEEecCCCCCCCCCHHHHHH
Q 011049 388 -----F--------QTEFRTLWEAT---------NVYIEMSPI--TH---ANKI--KKPILIIHGEVDDKVGLFPMQAER 438 (494)
Q Consensus 388 -----~--------~~~~~~~~~~~---------~~~~~~sp~--~~---~~~~--~~P~li~~G~~D~~v~~~~~~~~~ 438 (494)
+ .....+.|... +.+.-.+.+ .| -++. ++-....|+..|..+| ..+-.+
T Consensus 237 ~~~~~~~~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~~p--~~~K~~ 314 (403)
T PF11144_consen 237 ICSGEFFNFKNIRIYCFDKTFWTRNKNSPYYFSKARYIIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDLAP--AEDKEE 314 (403)
T ss_pred cccccccccCCEEEEEEeccccccCCCCccccChHHHHHHHhcChHHHHHHHhcccceEEEEEeccCCCCCC--HHHHHH
Confidence 0 00113445321 111111111 11 1122 2446678999999998 999999
Q ss_pred HHHHHHhCCCcEEEEEcC-----------CCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 439 FFDALKGHGALSRLVLLP-----------FEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 439 ~~~~l~~~g~~~~~~~~~-----------~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
+++.|++.|-+++++.+. +-.|++... ....++..+.-+.+.+.+
T Consensus 315 l~~~l~~lgfda~l~lIkdes~iDGkfIKnl~HGmgis--~k~Lf~KeLp~~lek~~~ 370 (403)
T PF11144_consen 315 LYEILKNLGFDATLHLIKDESEIDGKFIKNLEHGMGIS--DKALFKKELPLMLEKLQG 370 (403)
T ss_pred HHHHHHHcCCCeEEEEecChhhccchheeccccCCCCC--HHHHHHHHhHHHHHHhhc
Confidence 999999999999999884 347776532 234444444444455544
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=98.29 E-value=8.7e-06 Score=76.09 Aligned_cols=131 Identities=8% Similarity=0.071 Sum_probs=91.4
Q ss_pred eeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCC
Q 011049 19 IIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP 98 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~ 98 (494)
.|=+.+. +|++.+++-..-+......-|||||.++..- ..-+||++++++| .++.+-..... .- ...
T Consensus 383 ~l~iyd~---~~~e~kr~e~~lg~I~av~vs~dGK~~vvaN----dr~el~vididng--nv~~idkS~~~-lI---tdf 449 (668)
T COG4946 383 KLGIYDK---DGGEVKRIEKDLGNIEAVKVSPDGKKVVVAN----DRFELWVIDIDNG--NVRLIDKSEYG-LI---TDF 449 (668)
T ss_pred eEEEEec---CCceEEEeeCCccceEEEEEcCCCcEEEEEc----CceEEEEEEecCC--CeeEecccccc-ee---EEE
Confidence 5667777 7888888877767777889999999888652 2579999999998 66655332211 10 222
Q ss_pred ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccc
Q 011049 99 MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINL 178 (494)
Q Consensus 99 ~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~ 178 (494)
. |+|++++|||.-. +|+ -..+|.++|+++++.-.++.+.+. +-++.|+|
T Consensus 450 ~--~~~nsr~iAYafP-------------~gy----~tq~Iklydm~~~Kiy~vTT~ta~------------DfsPaFD~ 498 (668)
T COG4946 450 D--WHPNSRWIAYAFP-------------EGY----YTQSIKLYDMDGGKIYDVTTPTAY------------DFSPAFDP 498 (668)
T ss_pred E--EcCCceeEEEecC-------------cce----eeeeEEEEecCCCeEEEecCCccc------------ccCcccCC
Confidence 3 9999999999752 111 133588899999887777765533 23568899
Q ss_pred cCcEEEEEEecCCCC
Q 011049 179 NQLKILTSKESKTEI 193 (494)
Q Consensus 179 d~~~~~~~~~s~~~p 193 (494)
|++.++|.....-+|
T Consensus 499 d~ryLYfLs~RsLdP 513 (668)
T COG4946 499 DGRYLYFLSARSLDP 513 (668)
T ss_pred CCcEEEEEeccccCC
Confidence 999888876655444
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=3.8e-05 Score=64.36 Aligned_cols=116 Identities=10% Similarity=0.068 Sum_probs=69.5
Q ss_pred CcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC---CCcccccccccccHHHHHhcCccccccCCCCCEEE
Q 011049 344 SRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP---FGFQTEFRTLWEATNVYIEMSPITHANKIKKPILI 420 (494)
Q Consensus 344 ~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li 420 (494)
++++++|.|+|||.|.+++.++ . .+| |++.|.+.....- .+.... .. .-.++...+.. .+-.-.+++
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~-g-~~a-VLiNPAv~P~~~L~~~ig~~~~-y~-~~~~~h~~eL~-----~~~p~r~~v 129 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC-G-IRQ-VIFNPNLFPEENMEGKIDRPEE-YA-DIATKCVTNFR-----EKNRDRCLV 129 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH-C-CCE-EEECCCCChHHHHHHHhCCCcc-hh-hhhHHHHHHhh-----hcCcccEEE
Confidence 4699999999999999999998 3 344 4456665431100 000000 00 00111111111 111234699
Q ss_pred EecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 421 IHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 421 ~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
+..+.|.+.+ +.++.+.++.. .+..+.+|..|.|.. .+..+..|++|+.
T Consensus 130 llq~gDEvLD--yr~a~~~y~~~------y~~~v~~GGdH~f~~---fe~~l~~I~~F~~ 178 (180)
T PRK04940 130 ILSRNDEVLD--SQRTAEELHPY------YEIVWDEEQTHKFKN---ISPHLQRIKAFKT 178 (180)
T ss_pred EEeCCCcccC--HHHHHHHhccC------ceEEEECCCCCCCCC---HHHHHHHHHHHHh
Confidence 9999999987 66654444321 257889999999864 4567888899884
|
|
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=98.28 E-value=3.9e-05 Score=73.50 Aligned_cols=70 Identities=19% Similarity=0.217 Sum_probs=54.5
Q ss_pred ccCCC-CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC-CcEEEEEcCCCCCc--cCCcccHHHHHHHHHHHHHHh
Q 011049 411 ANKIK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHG-ALSRLVLLPFEHHV--YAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 411 ~~~~~-~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g-~~~~~~~~~~~~H~--~~~~~~~~~~~~~~~~fl~~~ 482 (494)
+++|+ +|+|.+.|++|.++| +.++..+.+.....+ .+.+.++.++.||. +.+...+...+..+.+||.++
T Consensus 333 l~~I~~~pll~V~ge~D~I~p--~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 333 PGAITRVALLTVEGENDDISG--LGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred HHHCcccceEEEeccCCCcCC--HHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence 56788 999999999999998 999988888764433 23456777788996 555566678888999999864
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=98.26 E-value=2e-05 Score=73.83 Aligned_cols=163 Identities=13% Similarity=0.188 Sum_probs=76.2
Q ss_pred ceeeeccCCCCCCCCCeeccccc--cccccceecCCCceEEEEeeeec-cceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLD--LRFRSVSWCDDSLALVNETWYKT-SQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~--~~~~~p~wspDg~~i~f~~~~~~-~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
.+||+++. +|+..+.+.... ...+..-|+|||+.|+|.+...+ ...-|+-++++++ +.+.+...+..
T Consensus 216 ~RiW~i~~---dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~--~~~~~~~~p~~----- 285 (386)
T PF14583_consen 216 QRIWTINT---DGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTG--ERRRLMEMPWC----- 285 (386)
T ss_dssp -SEEEEET---TS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT----EEEEEEE-SE-----
T ss_pred eEEEEEEc---CCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCC--CceEEEeCCce-----
Confidence 37999999 877766665432 23345679999999999887333 2345666777776 66666554432
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEE-ccCCCCCCCCCCceEeeecCCCceEEEEeeCcc-hhhhheeeeccCCC
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILL-NGRGFTPEGNIPFLDLFDINTGSKERIWESNRE-KYFETAVALVFGQG 172 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~-~~~~~~~~~~s~~~ 172 (494)
...+ .|+||+.++=-.. +..+.. ..+|.. ....+.|++++++.++...|-..... ....+..... .-
T Consensus 286 -~H~~--ss~Dg~L~vGDG~-----d~p~~v~~~~~~~-~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~--hP 354 (386)
T PF14583_consen 286 -SHFM--SSPDGKLFVGDGG-----DAPVDVADAGGYK-IENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVT--HP 354 (386)
T ss_dssp -EEEE--E-TTSSEEEEEE-------------------------EEEEEETTTTEEEEEEE-------BTTBSSTT----
T ss_pred -eeeE--EcCCCCEEEecCC-----CCCccccccccce-ecCCcEEEEeccccCceeeeeeccCcceeecCCCccC--CC
Confidence 2223 6899985443221 111100 111211 12245799999998876655443211 0000000000 01
Q ss_pred cccccccCcEEEEEEecCCCCCeEEEEEcC
Q 011049 173 EEDINLNQLKILTSKESKTEITQYHILSWP 202 (494)
Q Consensus 173 ~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~ 202 (494)
.++||||+++++|++ ...-++.||.+++.
T Consensus 355 hp~FSPDgk~VlF~S-d~~G~~~vY~v~i~ 383 (386)
T PF14583_consen 355 HPSFSPDGKWVLFRS-DMEGPPAVYLVEIP 383 (386)
T ss_dssp --EE-TTSSEEEEEE--TTSS-EEEEEE--
T ss_pred CCccCCCCCEEEEEC-CCCCCccEEEEeCc
Confidence 369999999999965 45667889998764
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.25 E-value=7.1e-05 Score=71.87 Aligned_cols=50 Identities=22% Similarity=0.320 Sum_probs=41.3
Q ss_pred cccCCCCCEEEEecCCCCCCCCCHHHHHHH-------HHHHHhCCCcEEEEEcCCCCCc
Q 011049 410 HANKIKKPILIIHGEVDDKVGLFPMQAERF-------FDALKGHGALSRLVLLPFEHHV 461 (494)
Q Consensus 410 ~~~~~~~P~li~~G~~D~~v~~~~~~~~~~-------~~~l~~~g~~~~~~~~~~~~H~ 461 (494)
.+.+|++|+++++|..|.+.| +.|+..+ .+.++..|..+-+.+-+..||-
T Consensus 292 DLr~Ir~Piivfas~gDnITP--P~QaL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHL 348 (581)
T PF11339_consen 292 DLRNIRSPIIVFASYGDNITP--PQQALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHL 348 (581)
T ss_pred ehhhCCCCEEEEeccCCCCCC--hhHhccchHhhcCCHHHHHhCCCEEEEEecCCCCce
Confidence 367899999999999999987 9998544 3556777888888888999996
|
Their function is unknown. |
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=98.21 E-value=7.9e-05 Score=68.31 Aligned_cols=108 Identities=14% Similarity=0.154 Sum_probs=67.7
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHH---hCCeEEEeCCCCCCCCCCCCCCC--------chhHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL---ARRFAVLAGPSIPIIGEGDKLPN--------DRFVEQ 323 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~G~~v~~~~~~~~~g~g~~~~~--------~~~~~~ 323 (494)
.++|+++.|-|. ...++..+...|. ...|.|+. .+..|+...... .-..++
T Consensus 2 ~~li~~IPGNPG---------------lv~fY~~Fl~~L~~~l~~~~~i~~---ish~Gh~~~~~~~~~~~~~~~~sL~~ 63 (266)
T PF10230_consen 2 RPLIVFIPGNPG---------------LVEFYEEFLSALYEKLNPQFEILG---ISHAGHSTSPSNSKFSPNGRLFSLQD 63 (266)
T ss_pred cEEEEEECCCCC---------------hHHHHHHHHHHHHHhCCCCCeeEE---ecCCCCcCCcccccccCCCCccCHHH
Confidence 578899988651 2222223333444 34788888 334444322211 112344
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCC---CceeEEEeCCCCCC
Q 011049 324 LVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP---HLFCCGIARSGSYN 380 (494)
Q Consensus 324 ~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p---~~~~a~v~~~~~~~ 380 (494)
.++-..+.++.++........++.++|||.|+|+++.++.+.+ ..++.++...|...
T Consensus 64 QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 64 QIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred HHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 5555556666665543223478999999999999999999998 67888888888643
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.3e-05 Score=75.65 Aligned_cols=145 Identities=16% Similarity=0.137 Sum_probs=104.1
Q ss_pred HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCC-CCCCCC---------CC-CCCcc-----ccccccc-
Q 011049 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARS-GSYNKT---------LT-PFGFQ-----TEFRTLW- 396 (494)
Q Consensus 334 ~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~-~~~~~~---------~~-~~~~~-----~~~~~~~- 396 (494)
++.+...++-++.+|.|.|==|..++.+++.. .|++|++.+. .+.|.. +- .|.+. .+.-..+
T Consensus 162 ~~~~~~~~~i~~FvV~GaSKRGWTtWltaa~D-~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l 240 (367)
T PF10142_consen 162 FLKKKFGVNIEKFVVTGASKRGWTTWLTAAVD-PRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQL 240 (367)
T ss_pred HHHhhcCCCccEEEEeCCchHhHHHHHhhccC-cceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhc
Confidence 34444456789999999999999999988865 7888888653 333311 00 11110 0000000
Q ss_pred ---ccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHH
Q 011049 397 ---EATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIW 473 (494)
Q Consensus 397 ---~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~ 473 (494)
+..+...-.+|+.+.++++.|-|++.|..|+... ++.+.-++..|.. +..+.++|+.+|+... .+...
T Consensus 241 ~tp~f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~--pD~~~~y~d~L~G---~K~lr~vPN~~H~~~~----~~~~~ 311 (367)
T PF10142_consen 241 DTPEFDKLMQIVDPYSYRDRLTMPKYIINATGDEFFV--PDSSNFYYDKLPG---EKYLRYVPNAGHSLIG----SDVVQ 311 (367)
T ss_pred CCHHHHHHHHhcCHHHHHHhcCccEEEEecCCCceec--cCchHHHHhhCCC---CeeEEeCCCCCcccch----HHHHH
Confidence 1123445679999999999999999999999976 8999999999985 4588999999999874 47788
Q ss_pred HHHHHHHHhcCCCCC
Q 011049 474 ETDRWLQKYCLSNTS 488 (494)
Q Consensus 474 ~~~~fl~~~l~~~~~ 488 (494)
.+..|+...+.+.+.
T Consensus 312 ~l~~f~~~~~~~~~l 326 (367)
T PF10142_consen 312 SLRAFYNRIQNGRPL 326 (367)
T ss_pred HHHHHHHHHHcCCCC
Confidence 899999988776554
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.13 E-value=4.8e-05 Score=75.27 Aligned_cols=92 Identities=15% Similarity=0.151 Sum_probs=56.8
Q ss_pred eeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeee-cc------ceEEEEEcCCCCCCCceEeeecccccc
Q 011049 19 IIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYK-TS------QTRTWLVCPGSKDVAPRVLFDRVFENV 91 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~-~~------~~~~~~~~~~~g~~~~~~lt~~~~~~~ 91 (494)
.|+++|+ ++|+...-.-.......+.|++||+.|+|++... .+ ..+||++.++++..+.+.|+++.....
T Consensus 151 ~l~v~Dl---~tg~~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~ 227 (414)
T PF02897_consen 151 TLRVFDL---ETGKFLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPF 227 (414)
T ss_dssp EEEEEET---TTTEEEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTT
T ss_pred EEEEEEC---CCCcCcCCcccccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCc
Confidence 5788888 6664332111122223389999999999998633 23 789999999987445567877765432
Q ss_pred cCCCCCCceeeCCCCCEEEEEEeccC
Q 011049 92 YSDPGSPMMTRTSTGTNVIAKIKKEN 117 (494)
Q Consensus 92 ~~~~~~~~~~~spDG~~i~~~~~~~~ 117 (494)
....+.+|+||++|++.+....
T Consensus 228 ----~~~~~~~s~d~~~l~i~~~~~~ 249 (414)
T PF02897_consen 228 ----WFVSVSRSKDGRYLFISSSSGT 249 (414)
T ss_dssp ----SEEEEEE-TTSSEEEEEEESSS
T ss_pred ----EEEEEEecCcccEEEEEEEccc
Confidence 0112337999999888775443
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.1e-05 Score=81.14 Aligned_cols=93 Identities=17% Similarity=0.143 Sum_probs=62.5
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC-----------------
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN----------------- 317 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~----------------- 317 (494)
.|+||++||.+ +....| ...+..|+++||.|+++|.+ |+|.+...
T Consensus 449 ~P~VVllHG~~-----------g~~~~~----~~lA~~La~~Gy~VIaiDlp---GHG~S~~~~~~~~~~a~~~~~~~y~ 510 (792)
T TIGR03502 449 WPVVIYQHGIT-----------GAKENA----LAFAGTLAAAGVATIAIDHP---LHGARSFDANASGVNATNANVLAYM 510 (792)
T ss_pred CcEEEEeCCCC-----------CCHHHH----HHHHHHHHhCCcEEEEeCCC---CCCccccccccccccccccCcccee
Confidence 68999999953 111122 23455778899999996654 34433111
Q ss_pred --------chhHHHHHHHHHHHHHHHH------Hc----CCCCCCcEEEEecChHHHHHHHHHHhC
Q 011049 318 --------DRFVEQLVSSAEAAVEEVV------RR----GVADPSRIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 318 --------~~~~~~~~~d~~~~v~~l~------~~----~~~d~~ri~i~G~S~GG~~a~~~~~~~ 365 (494)
.....+.+.|+......+. +. ...+..++.++|||+||.++..++...
T Consensus 511 Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 511 NLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred ccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 1134667888888777775 21 124567999999999999999998864
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.0001 Score=64.11 Aligned_cols=125 Identities=10% Similarity=0.073 Sum_probs=71.8
Q ss_pred ceeeeccCCCCCCCCCeeccc-cccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHK-LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~-~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
..||.++. .+.....+.- ........+|||+|+.|+.+.... +..+-+.++.+ +.+....... .
T Consensus 39 ~~l~~~~~---~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~--~~~v~lyd~~~-----~~i~~~~~~~-----~ 103 (194)
T PF08662_consen 39 FELFYLNE---KNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSM--PAKVTLYDVKG-----KKIFSFGTQP-----R 103 (194)
T ss_pred EEEEEEec---CCCccceeeccCCCceEEEEECcCCCEEEEEEccC--CcccEEEcCcc-----cEeEeecCCC-----c
Confidence 37888876 4444444432 233477889999999998775321 33566666652 2233222111 1
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
+ .+.|||+|++++..... ...+ .|..+|.+..+ .+-..... ......|
T Consensus 104 n-~i~wsP~G~~l~~~g~~---------------n~~G---~l~~wd~~~~~--~i~~~~~~-----------~~t~~~W 151 (194)
T PF08662_consen 104 N-TISWSPDGRFLVLAGFG---------------NLNG---DLEFWDVRKKK--KISTFEHS-----------DATDVEW 151 (194)
T ss_pred e-EEEECCCCCEEEEEEcc---------------CCCc---EEEEEECCCCE--EeeccccC-----------cEEEEEE
Confidence 2 24599999999886521 1112 37788887543 33221110 0123489
Q ss_pred cccCcEEEEEEec
Q 011049 177 NLNQLKILTSKES 189 (494)
Q Consensus 177 s~d~~~~~~~~~s 189 (494)
||||+.++...+.
T Consensus 152 sPdGr~~~ta~t~ 164 (194)
T PF08662_consen 152 SPDGRYLATATTS 164 (194)
T ss_pred cCCCCEEEEEEec
Confidence 9999988876654
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00013 Score=74.26 Aligned_cols=130 Identities=7% Similarity=-0.002 Sum_probs=83.2
Q ss_pred ccccceecCCCceEEEEeee----eccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccC
Q 011049 42 RFRSVSWCDDSLALVNETWY----KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEN 117 (494)
Q Consensus 42 ~~~~p~wspDg~~i~f~~~~----~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~ 117 (494)
....|+.||||+.++|+... +....+||+.+.++ +.+.+|.... + ..|. |||||++|+|....
T Consensus 351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg---~~~~lt~g~~-~-----t~Ps--WspDG~~lw~v~dg-- 417 (591)
T PRK13616 351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGG---VAVQVLEGHS-L-----TRPS--WSLDADAVWVVVDG-- 417 (591)
T ss_pred CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCC---cceeeecCCC-C-----CCce--ECCCCCceEEEecC--
Confidence 44689999999999999841 11256999999743 4577876553 2 5677 99999999998632
Q ss_pred ccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEE
Q 011049 118 DEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYH 197 (494)
Q Consensus 118 ~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~ 197 (494)
+...++.... ...+++++++++++.++ +. ++. -.+..|||||.++++... .++|
T Consensus 418 --~~~~~v~~~~-----~~gql~~~~vd~ge~~~-~~-~g~------------Issl~wSpDG~RiA~i~~-----g~v~ 471 (591)
T PRK13616 418 --NTVVRVIRDP-----ATGQLARTPVDASAVAS-RV-PGP------------ISELQLSRDGVRAAMIIG-----GKVY 471 (591)
T ss_pred --cceEEEeccC-----CCceEEEEeccCchhhh-cc-CCC------------cCeEEECCCCCEEEEEEC-----CEEE
Confidence 1122222211 12258888888876654 21 111 124589999999999763 4677
Q ss_pred E---EEcCCCceeEeec
Q 011049 198 I---LSWPLKKSSQITN 211 (494)
Q Consensus 198 ~---~~~~~~~~~~lt~ 211 (494)
+ ....++. .+|+.
T Consensus 472 Va~Vvr~~~G~-~~l~~ 487 (591)
T PRK13616 472 LAVVEQTEDGQ-YALTN 487 (591)
T ss_pred EEEEEeCCCCc-eeecc
Confidence 7 4444554 55543
|
|
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.04 E-value=8e-06 Score=83.80 Aligned_cols=131 Identities=21% Similarity=0.188 Sum_probs=82.8
Q ss_pred eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCC-CCCCCCCC
Q 011049 236 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI-PIIGEGDK 314 (494)
Q Consensus 236 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~-~~~g~g~~ 314 (494)
-+..-+|.|.....+ + +|++|++|||++..++... +.. ......+..+..+|+.+++| |..|+...
T Consensus 96 CLylNV~tp~~~~~~-~--~pV~V~iHGG~~~~gs~~~--------~~~--~~~~~~~~~~~VVvVt~~YRLG~lGF~st 162 (545)
T KOG1516|consen 96 CLYLNVYTPQGCSES-K--LPVMVYIHGGGFQFGSASS--------FEI--ISPAYVLLLKDVVVVTINYRLGPLGFLST 162 (545)
T ss_pred CceEEEeccCCCccC-C--CCEEEEEeCCceeeccccc--------hhh--cCchhccccCCEEEEEecccceeceeeec
Confidence 377788888764332 2 8999999999865443221 110 01122345567888887775 33343221
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHh--CCCceeEEEeCCCCC
Q 011049 315 LPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGSY 379 (494)
Q Consensus 315 ~~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~--~p~~~~a~v~~~~~~ 379 (494)
.......+....|+..|++|+.++ ..-||++|.|+|||+||..+..++.. ...+|..+|..+|..
T Consensus 163 ~d~~~~gN~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 163 GDSAAPGNLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred CCCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 111111233456888999998774 23699999999999999998766542 125888888888753
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00018 Score=64.76 Aligned_cols=151 Identities=15% Similarity=0.071 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC-----ceeEEEeCCCCCCCCCCCCCc-----cc
Q 011049 321 VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-----LFCCGIARSGSYNKTLTPFGF-----QT 390 (494)
Q Consensus 321 ~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~-----~~~a~v~~~~~~~~~~~~~~~-----~~ 390 (494)
......-+..++.+|.++..+ +++-++||||||..+..++..+.. .+...|++++.++-......- ..
T Consensus 82 ~~~qa~wl~~vl~~L~~~Y~~--~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~ 159 (255)
T PF06028_consen 82 YKKQAKWLKKVLKYLKKKYHF--KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLN 159 (255)
T ss_dssp HHHHHHHHHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CS
T ss_pred HHHHHHHHHHHHHHHHHhcCC--CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhc
Confidence 345577788899999998654 689999999999999999988632 467788888777643211100 00
Q ss_pred ccccccccHHHHHhcCccccccCC--CCCEEEEecC------CCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCC--CCC
Q 011049 391 EFRTLWEATNVYIEMSPITHANKI--KKPILIIHGE------VDDKVGLFPMQAERFFDALKGHGALSRLVLLPF--EHH 460 (494)
Q Consensus 391 ~~~~~~~~~~~~~~~sp~~~~~~~--~~P~li~~G~------~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~--~~H 460 (494)
..+ |-...+.|...-... -.++ .+.+|-|.|. .|..|| ...+..+...++.....++-.++.| +.|
T Consensus 160 ~~g-p~~~~~~y~~l~~~~-~~~~p~~i~VLnI~G~~~~g~~sDG~V~--~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~H 235 (255)
T PF06028_consen 160 KNG-PKSMTPMYQDLLKNR-RKNFPKNIQVLNIYGDLEDGSNSDGIVP--NASSLSLRYLLKNRAKSYQEKTVTGKDAQH 235 (255)
T ss_dssp TT--BSS--HHHHHHHHTH-GGGSTTT-EEEEEEEESBTTCSBTSSSB--HHHHCTHHHHCTTTSSEEEEEEEESGGGSC
T ss_pred ccC-CcccCHHHHHHHHHH-HhhCCCCeEEEEEecccCCCCCCCeEEe--HHHHHHHHHHhhcccCceEEEEEECCCCcc
Confidence 111 222223333221110 0222 3679999998 799998 8888888888887777788888876 578
Q ss_pred ccCCcccHHHHHHHHHHHH
Q 011049 461 VYAARENVMHVIWETDRWL 479 (494)
Q Consensus 461 ~~~~~~~~~~~~~~~~~fl 479 (494)
.-. .++. .+.+.|.+||
T Consensus 236 S~L-heN~-~V~~~I~~FL 252 (255)
T PF06028_consen 236 SQL-HENP-QVDKLIIQFL 252 (255)
T ss_dssp CGG-GCCH-HHHHHHHHHH
T ss_pred ccC-CCCH-HHHHHHHHHh
Confidence 744 2333 6666777776
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=97.94 E-value=2.8e-05 Score=56.26 Aligned_cols=75 Identities=16% Similarity=0.116 Sum_probs=51.5
Q ss_pred CceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCC
Q 011049 234 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGD 313 (494)
Q Consensus 234 g~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~ 313 (494)
|.+|....+.|++. +..+|+++||-+. ........+..|+++||.|+..| .+|+|.
T Consensus 1 G~~L~~~~w~p~~~------~k~~v~i~HG~~e---------------h~~ry~~~a~~L~~~G~~V~~~D---~rGhG~ 56 (79)
T PF12146_consen 1 GTKLFYRRWKPENP------PKAVVVIVHGFGE---------------HSGRYAHLAEFLAEQGYAVFAYD---HRGHGR 56 (79)
T ss_pred CcEEEEEEecCCCC------CCEEEEEeCCcHH---------------HHHHHHHHHHHHHhCCCEEEEEC---CCcCCC
Confidence 67889999999862 4789999999531 22223456778999999999944 456776
Q ss_pred CCCC---chhHHHHHHHHHHHH
Q 011049 314 KLPN---DRFVEQLVSSAEAAV 332 (494)
Q Consensus 314 ~~~~---~~~~~~~~~d~~~~v 332 (494)
+... ....++.++|+...+
T Consensus 57 S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 57 SEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CCCcccccCCHHHHHHHHHHHh
Confidence 6532 223466777776654
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.0012 Score=61.94 Aligned_cols=205 Identities=17% Similarity=0.158 Sum_probs=121.3
Q ss_pred CceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC------
Q 011049 234 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP------ 307 (494)
Q Consensus 234 g~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~------ 307 (494)
|.+-.-.||+|... +.+..+||++||.+.+ ..|..........|...|+.++...-.+
T Consensus 70 ~~~~flaL~~~~~~----~~~~G~vIilp~~g~~------------~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~ 133 (310)
T PF12048_consen 70 GEERFLALWRPANS----AKPQGAVIILPDWGEH------------PDWPGLIAPLRRELPDHGWATLSITLPDPAPPAS 133 (310)
T ss_pred CCEEEEEEEecccC----CCCceEEEEecCCCCC------------CCcHhHHHHHHHHhhhcCceEEEecCCCcccccC
Confidence 33445567777652 2236799999986421 1133333345568889999998721111
Q ss_pred -CC--------CCCCC--C---------------CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHH
Q 011049 308 -II--------GEGDK--L---------------PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL 361 (494)
Q Consensus 308 -~~--------g~g~~--~---------------~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~ 361 (494)
.. .-+.. . ....+......-+.+++.++.+++. .+|+|+||+.|+++++.+
T Consensus 134 p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~---~~ivlIg~G~gA~~~~~~ 210 (310)
T PF12048_consen 134 PNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGG---KNIVLIGHGTGAGWAARY 210 (310)
T ss_pred CccCCCCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCC---ceEEEEEeChhHHHHHHH
Confidence 00 00000 0 0112234456667778888888773 569999999999999999
Q ss_pred HHhCCC-ceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHH
Q 011049 362 LAHAPH-LFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFF 440 (494)
Q Consensus 362 ~~~~p~-~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~ 440 (494)
+...+. .+.+.|.+++-..... ........+.+++.|+|=|++.+... ..+.....
T Consensus 211 la~~~~~~~daLV~I~a~~p~~~-------------------~n~~l~~~la~l~iPvLDi~~~~~~~----~~~~a~~R 267 (310)
T PF12048_consen 211 LAEKPPPMPDALVLINAYWPQPD-------------------RNPALAEQLAQLKIPVLDIYSADNPA----SQQTAKQR 267 (310)
T ss_pred HhcCCCcccCeEEEEeCCCCcch-------------------hhhhHHHHhhccCCCEEEEecCCChH----HHHHHHHH
Confidence 998864 4788888877422100 01122234567889999999888332 22222232
Q ss_pred HHH-HhC-CCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 441 DAL-KGH-GALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 441 ~~l-~~~-g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
+.+ +++ ...++-+.+++..|.... ......++|..||.++
T Consensus 268 ~~~a~r~~~~~YrQ~~L~~~~~~~~~--~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 268 KQAAKRNKKPDYRQIQLPGLPDNPSG--WQEQLLRRIRGWLKRH 309 (310)
T ss_pred HHHHHhccCCCceeEecCCCCCChhh--HHHHHHHHHHHHHHhh
Confidence 222 222 244666677777665532 2223788999999876
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00042 Score=65.16 Aligned_cols=87 Identities=13% Similarity=0.041 Sum_probs=60.4
Q ss_pred hHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCc
Q 011049 289 SSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL 368 (494)
Q Consensus 289 ~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~ 368 (494)
....++++|..|+..+-+ ....+ .....+.+...+++..+++.+++... .++|-++|+|.||.+++.++++.+.+
T Consensus 131 ~V~~l~~~g~~vfvIsw~-nPd~~--~~~~~~edYi~e~l~~aid~v~~itg--~~~InliGyCvGGtl~~~ala~~~~k 205 (445)
T COG3243 131 LVRWLLEQGLDVFVISWR-NPDAS--LAAKNLEDYILEGLSEAIDTVKDITG--QKDINLIGYCVGGTLLAAALALMAAK 205 (445)
T ss_pred HHHHHHHcCCceEEEecc-CchHh--hhhccHHHHHHHHHHHHHHHHHHHhC--ccccceeeEecchHHHHHHHHhhhhc
Confidence 456788999999884432 11111 11223333344788889998888643 36799999999999999999999877
Q ss_pred -eeEEEeCCCCCC
Q 011049 369 -FCCGIARSGSYN 380 (494)
Q Consensus 369 -~~a~v~~~~~~~ 380 (494)
++.+..+....|
T Consensus 206 ~I~S~T~lts~~D 218 (445)
T COG3243 206 RIKSLTLLTSPVD 218 (445)
T ss_pred ccccceeeecchh
Confidence 777777655444
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00039 Score=63.05 Aligned_cols=65 Identities=15% Similarity=0.087 Sum_probs=58.5
Q ss_pred CCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 413 KIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 413 ~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
...+|-|.+.++.|..++ ....+++++..+++|.+++...|.+..|.-+...+.+.+.+.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~--~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIP--WRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcC--HHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 345899999999999998 99999999999999999999999999999888888888888888774
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00082 Score=65.56 Aligned_cols=116 Identities=17% Similarity=0.217 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHH--cCCCCCCcEEEEecChHHHHHHHHHHhCCCc-eeEEEeCCCCCCCCCCCCCcccccccccccHHH
Q 011049 325 VSSAEAAVEEVVR--RGVADPSRIAVGGHSYGAFMTAHLLAHAPHL-FCCGIARSGSYNKTLTPFGFQTEFRTLWEATNV 401 (494)
Q Consensus 325 ~~d~~~~v~~l~~--~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~-~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (494)
.+-+..+.++.+. .+..-...|.++|+|+|+.++.++.....+. +.|+|++.=..+...-+.+...
T Consensus 229 ae~~vSf~r~kvlei~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgprgirD----------- 297 (784)
T KOG3253|consen 229 AEYSVSFDRYKVLEITGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPRGIRD----------- 297 (784)
T ss_pred HHHHHHHhhhhhhhhhccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcccCCcc-----------
Confidence 3334444443322 2334457899999999988888777665544 5666665432221111111111
Q ss_pred HHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccC
Q 011049 402 YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA 463 (494)
Q Consensus 402 ~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 463 (494)
..+-.++.|+|++.|.+|..++ +...+++.+++++. ++++++.+++|.+.
T Consensus 298 -------E~Lldmk~PVLFV~Gsnd~mcs--pn~ME~vreKMqA~---~elhVI~~adhsma 347 (784)
T KOG3253|consen 298 -------EALLDMKQPVLFVIGSNDHMCS--PNSMEEVREKMQAE---VELHVIGGADHSMA 347 (784)
T ss_pred -------hhhHhcCCceEEEecCCcccCC--HHHHHHHHHHhhcc---ceEEEecCCCcccc
Confidence 1223467999999999999987 88778888888764 78999999999975
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00026 Score=63.02 Aligned_cols=54 Identities=15% Similarity=0.151 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHcC---CCCCCcEEEEecChHHHHHHHHHHhCC---CceeEEEeCCCC
Q 011049 325 VSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAP---HLFCCGIARSGS 378 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~~~p---~~~~a~v~~~~~ 378 (494)
.+-+..+++.+.+.. ...+++|.++||||||.++-.++...+ +.++.+|.++..
T Consensus 63 ~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tP 122 (225)
T PF07819_consen 63 AEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTP 122 (225)
T ss_pred HHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCC
Confidence 344455555555432 346789999999999999988877653 467777776543
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00063 Score=56.00 Aligned_cols=118 Identities=16% Similarity=0.103 Sum_probs=77.1
Q ss_pred CCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEe
Q 011049 343 PSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIH 422 (494)
Q Consensus 343 ~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~ 422 (494)
++.+++++||.|..++++++.+....++++++++|.--... -..+......+|... .++.-|.++++
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~------------~~~~~~~~tf~~~p~-~~lpfps~vva 124 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRP------------EIRPKHLMTFDPIPR-EPLPFPSVVVA 124 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCcccc------------ccchhhccccCCCcc-ccCCCceeEEE
Confidence 35599999999999999999888778999999988521100 001111122233222 22346899999
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccC--CcccHHHHHHHHHHHHH
Q 011049 423 GEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA--ARENVMHVIWETDRWLQ 480 (494)
Q Consensus 423 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~--~~~~~~~~~~~~~~fl~ 480 (494)
..+|+.|+ +++++.+.++.-. .++...++||-.. +.....+-+..+.+|+.
T Consensus 125 SrnDp~~~--~~~a~~~a~~wgs-----~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s 177 (181)
T COG3545 125 SRNDPYVS--YEHAEDLANAWGS-----ALVDVGEGGHINAESGFGPWPEGYALLAQLLS 177 (181)
T ss_pred ecCCCCCC--HHHHHHHHHhccH-----hheecccccccchhhcCCCcHHHHHHHHHHhh
Confidence 99999998 9999999888864 5777778888532 12233344444444443
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00075 Score=61.82 Aligned_cols=119 Identities=17% Similarity=0.100 Sum_probs=78.5
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCC-----CchhHHHHH-hC
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGM-----TPTSSLIFL-AR 296 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~-~~ 296 (494)
..+++.++. |+..+....+.-++..+ -.-|++.-|.+. .+... .......++ ..
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~~a~~-----~RWiL~s~GNg~--------------~~E~~~~~~~~~~~~~~~ak~~ 170 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQPEAKP-----QRWILVSNGNGE--------------CYENRAMLDYKDDWIQRFAKEL 170 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCCCCCC-----CcEEEEEcCChH--------------HhhhhhhhccccHHHHHHHHHc
Confidence 567888885 99999888876444322 235666655321 11110 011223333 47
Q ss_pred CeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC-CCCCCcEEEEecChHHHHHHHHHHhC
Q 011049 297 RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG-VADPSRIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 297 G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~-~~d~~ri~i~G~S~GG~~a~~~~~~~ 365 (494)
|-+|+..||+| .|.+..... .++++.|..++++||+++. .+.+++|.+.|||.||.++..++.++
T Consensus 171 ~aNvl~fNYpG---Vg~S~G~~s-~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 171 GANVLVFNYPG---VGSSTGPPS-RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CCcEEEECCCc---cccCCCCCC-HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 88888877754 444433333 4889999999999999743 37889999999999999998766654
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0011 Score=57.71 Aligned_cols=149 Identities=17% Similarity=0.151 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC-----ceeEEEeCCCCCCC-CCCCC-Ccc--cccc
Q 011049 323 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-----LFCCGIARSGSYNK-TLTPF-GFQ--TEFR 393 (494)
Q Consensus 323 ~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~-----~~~a~v~~~~~~~~-~~~~~-~~~--~~~~ 393 (494)
+...-+..++.+|.++..+ .++-++|||+||.....++..+.+ .++-.|++++.++. ...+- ... ...+
T Consensus 117 ~~s~wlk~~msyL~~~Y~i--~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~~~~ 194 (288)
T COG4814 117 DQSKWLKKAMSYLQKHYNI--PKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVLKDG 194 (288)
T ss_pred hHHHHHHHHHHHHHHhcCC--ceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheeeccC
Confidence 3356678889999998755 568899999999999888887632 34666666666551 11000 000 0000
Q ss_pred cc-cccH-HHHHhcCccccccCC--CCCEEEEecCC------CCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCC--CCCc
Q 011049 394 TL-WEAT-NVYIEMSPITHANKI--KKPILIIHGEV------DDKVGLFPMQAERFFDALKGHGALSRLVLLPF--EHHV 461 (494)
Q Consensus 394 ~~-~~~~-~~~~~~sp~~~~~~~--~~P~li~~G~~------D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~--~~H~ 461 (494)
.. -..+ ..|... ....+ .+-+|+|.|+. |..|| ...+...+..+...++.+.-.+|+| +.|.
T Consensus 195 ~~~~~t~y~~y~~~----n~k~v~~~~evl~IaGDl~dg~~tDG~Vp--~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs 268 (288)
T COG4814 195 PGLIKTPYYDYIAK----NYKKVSPNTEVLLIAGDLDDGKQTDGAVP--WASSLSIYHLFKKNGKSYIESLYKGKDARHS 268 (288)
T ss_pred ccccCcHHHHHHHh----cceeCCCCcEEEEEecccccCCcCCCcee--chHhHHHHHHhccCcceeEEEeeeCCcchhh
Confidence 00 0000 111110 11112 36799999985 46776 7778888888888877776667765 5776
Q ss_pred cCCcccHHHHHHHHHHHHHH
Q 011049 462 YAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 462 ~~~~~~~~~~~~~~~~fl~~ 481 (494)
-. +++. .+...+..||.+
T Consensus 269 ~l-hen~-~v~~yv~~FLw~ 286 (288)
T COG4814 269 KL-HENP-TVAKYVKNFLWE 286 (288)
T ss_pred cc-CCCh-hHHHHHHHHhhc
Confidence 43 2332 555566666643
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0024 Score=54.43 Aligned_cols=87 Identities=13% Similarity=0.128 Sum_probs=63.8
Q ss_pred hHHHHHhCCeEEEeCCCCCC-CCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC--
Q 011049 289 SSLIFLARRFAVLAGPSIPI-IGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-- 365 (494)
Q Consensus 289 ~~~~l~~~G~~v~~~~~~~~-~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~-- 365 (494)
....+-+.+|..+.+-.+.+ .|+|.. ...+.++|+..+++++...++ ...|+++|||-|-.-.++++++.
T Consensus 58 L~~~lde~~wslVq~q~~Ssy~G~Gt~-----slk~D~edl~~l~~Hi~~~~f--St~vVL~GhSTGcQdi~yYlTnt~~ 130 (299)
T KOG4840|consen 58 LNRYLDENSWSLVQPQLRSSYNGYGTF-----SLKDDVEDLKCLLEHIQLCGF--STDVVLVGHSTGCQDIMYYLTNTTK 130 (299)
T ss_pred HHHHHhhccceeeeeeccccccccccc-----cccccHHHHHHHHHHhhccCc--ccceEEEecCccchHHHHHHHhccc
Confidence 44467789999887544322 345543 234568899999998876654 35899999999998888887543
Q ss_pred CCceeEEEeCCCCCCCC
Q 011049 366 PHLFCCGIARSGSYNKT 382 (494)
Q Consensus 366 p~~~~a~v~~~~~~~~~ 382 (494)
|..++++|+.+|++|..
T Consensus 131 ~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 131 DRKIRAAILQAPVSDRE 147 (299)
T ss_pred hHHHHHHHHhCccchhh
Confidence 46789999999999854
|
|
| >TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171 | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00015 Score=74.72 Aligned_cols=87 Identities=6% Similarity=-0.091 Sum_probs=62.7
Q ss_pred ceeeeccCCCCCCCCCeec-cccccccccceecCCCceEEE-Eeeee--ccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 18 DIIYTQPAEPAEGEKPEIL-HKLDLRFRSVSWCDDSLALVN-ETWYK--TSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~l-t~~~~~~~~p~wspDg~~i~f-~~~~~--~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
++|.++|. +|..++.+ +........|+|||||+.|+| ++... + ...||+.++++.......|--++.
T Consensus 329 ~~L~~~D~---dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g-~s~vYv~~L~t~~~~~vkl~ve~a----- 399 (912)
T TIGR02171 329 GNLAYIDY---TKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPG-KSSVYVRNLNASGSGLVKLPVENA----- 399 (912)
T ss_pred CeEEEEec---CCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCC-CceEEEEehhccCCCceEeecccc-----
Confidence 48999999 99999988 888888889999999999999 54444 4 788999999875334344433322
Q ss_pred CCCCCceeeCCCC-CEEEEEEec
Q 011049 94 DPGSPMMTRTSTG-TNVIAKIKK 115 (494)
Q Consensus 94 ~~~~~~~~~spDG-~~i~~~~~~ 115 (494)
.-|.....+.| +-|+|.+..
T Consensus 400 --aiprwrv~e~gdt~ivyv~~a 420 (912)
T TIGR02171 400 --AIPRWRVLENGDTVIVYVSDA 420 (912)
T ss_pred --cccceEecCCCCeEEEEEcCC
Confidence 34443346666 456777653
|
This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown. |
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0011 Score=65.47 Aligned_cols=138 Identities=14% Similarity=0.047 Sum_probs=83.2
Q ss_pred cceecCCCceEEEEeeeec-cceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEE
Q 011049 45 SVSWCDDSLALVNETWYKT-SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYI 123 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~-~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~ 123 (494)
..++||||+.|+|..+.+| ....++++|+++| +.+.+.-.... ... +.|++||+.++|..........
T Consensus 128 ~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg----~~l~d~i~~~~----~~~-~~W~~d~~~~~y~~~~~~~~~~-- 196 (414)
T PF02897_consen 128 GFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETG----KFLPDGIENPK----FSS-VSWSDDGKGFFYTRFDEDQRTS-- 196 (414)
T ss_dssp EEEETTTSSEEEEEEEETTSSEEEEEEEETTTT----EEEEEEEEEEE----SEE-EEECTTSSEEEEEECSTTTSS---
T ss_pred eeeECCCCCEEEEEecCCCCceEEEEEEECCCC----cCcCCcccccc----cce-EEEeCCCCEEEEEEeCcccccc--
Confidence 5679999999999987655 4578999999987 33333211110 111 4499999999998743210000
Q ss_pred EEccCCCCCCCCCCceEeeecCCCceE--EEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEc
Q 011049 124 LLNGRGFTPEGNIPFLDLFDINTGSKE--RIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSW 201 (494)
Q Consensus 124 ~~~~~g~~~~~~~~~l~~~d~~~g~~~--~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~ 201 (494)
.......++++.+.+...+ .+++.....+ ..+ ....|+|++.+++...+...-.++|++++
T Consensus 197 --------~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~--~~~-------~~~~s~d~~~l~i~~~~~~~~s~v~~~d~ 259 (414)
T PF02897_consen 197 --------DSGYPRQVYRHKLGTPQSEDELVFEEPDEPF--WFV-------SVSRSKDGRYLFISSSSGTSESEVYLLDL 259 (414)
T ss_dssp --------CCGCCEEEEEEETTS-GGG-EEEEC-TTCTT--SEE-------EEEE-TTSSEEEEEEESSSSEEEEEEEEC
T ss_pred --------cCCCCcEEEEEECCCChHhCeeEEeecCCCc--EEE-------EEEecCcccEEEEEEEccccCCeEEEEec
Confidence 0111335888888776543 5666543311 011 23668889888877766554468999998
Q ss_pred CCC-----ceeEee
Q 011049 202 PLK-----KSSQIT 210 (494)
Q Consensus 202 ~~~-----~~~~lt 210 (494)
..+ +.+.+.
T Consensus 260 ~~~~~~~~~~~~l~ 273 (414)
T PF02897_consen 260 DDGGSPDAKPKLLS 273 (414)
T ss_dssp CCTTTSS-SEEEEE
T ss_pred cccCCCcCCcEEEe
Confidence 764 455554
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00054 Score=68.07 Aligned_cols=61 Identities=28% Similarity=0.264 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHHHcC-CCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCC
Q 011049 321 VEQLVSSAEAAVEEVVRRG-VADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 381 (494)
Q Consensus 321 ~~~~~~d~~~~v~~l~~~~-~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~ 381 (494)
.++.+.|+...++++..+- ..+..+++++|.||||.+|+++-.++|++|.++++-++++..
T Consensus 89 ~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 89 SEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 5678999999999998653 335569999999999999999999999999999998887653
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0042 Score=56.17 Aligned_cols=220 Identities=15% Similarity=0.149 Sum_probs=114.6
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCc-cCCCCchhHHHHHhCCeEEEeCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNE-FSGMTPTSSLIFLARRFAVLAGPSIP 307 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~G~~v~~~~~~~ 307 (494)
+++.-| .+.+.++-..+ +.+|+||-.|=-|- +... |..+............|.++.++..|
T Consensus 4 v~t~~G-~v~V~v~G~~~------~~kp~ilT~HDvGl-----------Nh~scF~~ff~~~~m~~i~~~f~i~Hi~aPG 65 (283)
T PF03096_consen 4 VETPYG-SVHVTVQGDPK------GNKPAILTYHDVGL-----------NHKSCFQGFFNFEDMQEILQNFCIYHIDAPG 65 (283)
T ss_dssp EEETTE-EEEEEEESS--------TTS-EEEEE--TT-------------HHHHCHHHHCSHHHHHHHTTSEEEEEE-TT
T ss_pred eccCce-EEEEEEEecCC------CCCceEEEeccccc-----------cchHHHHHHhcchhHHHHhhceEEEEEeCCC
Confidence 455556 67777774332 13799999994321 1111 33222233334456788888755533
Q ss_pred CCCCCCCCCCch--h--HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCC-
Q 011049 308 IIGEGDKLPNDR--F--VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT- 382 (494)
Q Consensus 308 ~~g~g~~~~~~~--~--~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~- 382 (494)
. ..|....... + .+++.+++..+++++ +. +.+..+|--+|+++-..+|..+|+++-+.|++++.....
T Consensus 66 q-e~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f---~l---k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~g 138 (283)
T PF03096_consen 66 Q-EEGAATLPEGYQYPSMDQLAEMLPEVLDHF---GL---KSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAG 138 (283)
T ss_dssp T-STT-----TT-----HHHHHCTHHHHHHHH---T------EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---
T ss_pred C-CCCcccccccccccCHHHHHHHHHHHHHhC---Cc---cEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCcc
Confidence 2 2232222222 2 345555666666655 32 568999999999999999999999999999998864411
Q ss_pred -------------CCCCCccc-------------ccc-ccc-------------ccH-------HHHHhcCc-cccccCC
Q 011049 383 -------------LTPFGFQT-------------EFR-TLW-------------EAT-------NVYIEMSP-ITHANKI 414 (494)
Q Consensus 383 -------------~~~~~~~~-------------~~~-~~~-------------~~~-------~~~~~~sp-~~~~~~~ 414 (494)
+...+... +.. ..- .++ +.|..... .......
T Consensus 139 w~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~ 218 (283)
T PF03096_consen 139 WMEWFYQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSL 218 (283)
T ss_dssp HHHHHHHHHH-------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTC
T ss_pred HHHHHHHHHhcccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCC
Confidence 10001100 000 000 000 11111111 1224455
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
.+|+|++.|+..+. .+++.++..+|-. .+.+++..+++|=... .+.+.+..+.+.=|++
T Consensus 219 ~c~vLlvvG~~Sp~----~~~vv~~ns~Ldp--~~ttllkv~dcGglV~-eEqP~klaea~~lFlQ 277 (283)
T PF03096_consen 219 GCPVLLVVGDNSPH----VDDVVEMNSKLDP--TKTTLLKVADCGGLVL-EEQPGKLAEAFKLFLQ 277 (283)
T ss_dssp CS-EEEEEETTSTT----HHHHHHHHHHS-C--CCEEEEEETT-TT-HH-HH-HHHHHHHHHHHHH
T ss_pred CCCeEEEEecCCcc----hhhHHHHHhhcCc--ccceEEEecccCCccc-ccCcHHHHHHHHHHHc
Confidence 69999999999987 6788899998854 4578999998765443 3555566555555554
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.01 Score=51.69 Aligned_cols=150 Identities=9% Similarity=0.064 Sum_probs=85.1
Q ss_pred cccceecCCCceEEEEeeee--c------cceEEEEEcCCCCCCCceEeeecc-cccccCCCCCCceeeCCCCCEEEEEE
Q 011049 43 FRSVSWCDDSLALVNETWYK--T------SQTRTWLVCPGSKDVAPRVLFDRV-FENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 43 ~~~p~wspDg~~i~f~~~~~--~------~~~~~~~~~~~~g~~~~~~lt~~~-~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
.....|+|+|+.|++....+ . ...+||.++..+. ....+.-.. +.. .. +.|||+|++++...
T Consensus 8 ~~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~--~~~~i~l~~~~~I-----~~--~~WsP~g~~favi~ 78 (194)
T PF08662_consen 8 DAKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNI--PVESIELKKEGPI-----HD--VAWSPNGNEFAVIY 78 (194)
T ss_pred eEEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCC--ccceeeccCCCce-----EE--EEECcCCCEEEEEE
Confidence 44678999999999887621 1 2578999987765 333332221 111 11 33999999988765
Q ss_pred eccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCC
Q 011049 114 KKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEI 193 (494)
Q Consensus 114 ~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p 193 (494)
.. . .. .+.++|+++.....+ .... .+...|||+|+.+++... .+.+
T Consensus 79 g~---------------~--~~--~v~lyd~~~~~i~~~--~~~~------------~n~i~wsP~G~~l~~~g~-~n~~ 124 (194)
T PF08662_consen 79 GS---------------M--PA--KVTLYDVKGKKIFSF--GTQP------------RNTISWSPDGRFLVLAGF-GNLN 124 (194)
T ss_pred cc---------------C--Cc--ccEEEcCcccEeEee--cCCC------------ceEEEECCCCCEEEEEEc-cCCC
Confidence 21 1 11 356666653222111 1111 123489999988777543 3456
Q ss_pred CeEEEEEcCCCceeEeecCCCCCCcccccccEEEEEEcCCCceEEEEEEeCC
Q 011049 194 TQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPP 245 (494)
Q Consensus 194 ~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~ 245 (494)
.++..+|.... +.+...... ....+.|. +||..+-.....|.
T Consensus 125 G~l~~wd~~~~--~~i~~~~~~-------~~t~~~Ws-PdGr~~~ta~t~~r 166 (194)
T PF08662_consen 125 GDLEFWDVRKK--KKISTFEHS-------DATDVEWS-PDGRYLATATTSPR 166 (194)
T ss_pred cEEEEEECCCC--EEeeccccC-------cEEEEEEc-CCCCEEEEEEeccc
Confidence 78888887633 334332211 13455554 78877766666554
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.015 Score=54.37 Aligned_cols=141 Identities=10% Similarity=-0.023 Sum_probs=77.0
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
..+.|++++. .+++...............|+|||+.++..... ...+++.++.++ + .+....... .+
T Consensus 51 ~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~---~~~l~~~d~~~~--~--~~~~~~~~~---~~ 117 (300)
T TIGR03866 51 DSDTIQVIDL---ATGEVIGTLPSGPDPELFALHPNGKILYIANED---DNLVTVIDIETR--K--VLAEIPVGV---EP 117 (300)
T ss_pred CCCeEEEEEC---CCCcEEEeccCCCCccEEEECCCCCEEEEEcCC---CCeEEEEECCCC--e--EEeEeeCCC---Cc
Confidence 3457888887 555544322222223467899999977654322 347888888764 2 222222111 11
Q ss_pred CCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccc
Q 011049 96 GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEED 175 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~ 175 (494)
. .+.|+|||+.+++.... . ..+..+|.++++.......... .....
T Consensus 118 ~--~~~~~~dg~~l~~~~~~------------------~--~~~~~~d~~~~~~~~~~~~~~~------------~~~~~ 163 (300)
T TIGR03866 118 E--GMAVSPDGKIVVNTSET------------------T--NMAHFIDTKTYEIVDNVLVDQR------------PRFAE 163 (300)
T ss_pred c--eEEECCCCCEEEEEecC------------------C--CeEEEEeCCCCeEEEEEEcCCC------------ccEEE
Confidence 2 23489999988776421 1 1244567666543321111110 01237
Q ss_pred ccccCcEEEEEEecCCCCCeEEEEEcCCCce
Q 011049 176 INLNQLKILTSKESKTEITQYHILSWPLKKS 206 (494)
Q Consensus 176 ~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~ 206 (494)
|++|+..+++... ....++++++++++.
T Consensus 164 ~s~dg~~l~~~~~---~~~~v~i~d~~~~~~ 191 (300)
T TIGR03866 164 FTADGKELWVSSE---IGGTVSVIDVATRKV 191 (300)
T ss_pred ECCCCCEEEEEcC---CCCEEEEEEcCccee
Confidence 8899887766432 235688888877653
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.008 Score=55.07 Aligned_cols=159 Identities=9% Similarity=0.031 Sum_probs=86.9
Q ss_pred ceeeeccCCCCCCCCCeecccccccc-cc---ceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRF-RS---VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~-~~---p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
++|++.++ +.|+.+..+...... .+ ..|.|+||..+.+...+. .-.+|-++..+|..+..+....-..++-.
T Consensus 167 Dri~~y~~---~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~s-tV~v~~y~~~~g~~~~lQ~i~tlP~dF~g 242 (346)
T COG2706 167 DRIFLYDL---DDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNS-TVDVLEYNPAVGKFEELQTIDTLPEDFTG 242 (346)
T ss_pred ceEEEEEc---ccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCC-EEEEEEEcCCCceEEEeeeeccCccccCC
Confidence 36777776 445444433322222 23 469999997666655554 45666666655533333322222222211
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEE--eeCcchhhhheeeeccCC
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIW--ESNREKYFETAVALVFGQ 171 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~--~~~~~~~~~~~~~~~s~~ 171 (494)
....-.+-.||||++|+..-+. . +.-.++.+|.++|+.+.+- ...+. .+
T Consensus 243 ~~~~aaIhis~dGrFLYasNRg--------------~----dsI~~f~V~~~~g~L~~~~~~~teg~----------~P- 293 (346)
T COG2706 243 TNWAAAIHISPDGRFLYASNRG--------------H----DSIAVFSVDPDGGKLELVGITPTEGQ----------FP- 293 (346)
T ss_pred CCceeEEEECCCCCEEEEecCC--------------C----CeEEEEEEcCCCCEEEEEEEeccCCc----------CC-
Confidence 1222334479999988665321 1 1123678888888755432 22222 00
Q ss_pred CcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEee
Q 011049 172 GEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQIT 210 (494)
Q Consensus 172 ~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt 210 (494)
..-.|+++|+.+++..+.... -.+|..+.++++...+.
T Consensus 294 R~F~i~~~g~~Liaa~q~sd~-i~vf~~d~~TG~L~~~~ 331 (346)
T COG2706 294 RDFNINPSGRFLIAANQKSDN-ITVFERDKETGRLTLLG 331 (346)
T ss_pred ccceeCCCCCEEEEEccCCCc-EEEEEEcCCCceEEecc
Confidence 122677888877776655433 56888888888766554
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0037 Score=65.46 Aligned_cols=123 Identities=10% Similarity=0.042 Sum_probs=74.9
Q ss_pred cccceecCCCceEEEEeeeec-cceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccce
Q 011049 43 FRSVSWCDDSLALVNETWYKT-SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 121 (494)
Q Consensus 43 ~~~p~wspDg~~i~f~~~~~~-~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~ 121 (494)
.....|||||+.|+|..+.++ +..+|+++++++|..-+..+... ...+.|++||+.++|.....
T Consensus 129 l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~----------~~~~~w~~D~~~~~y~~~~~----- 193 (686)
T PRK10115 129 LGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNV----------EPSFVWANDSWTFYYVRKHP----- 193 (686)
T ss_pred EeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCc----------ceEEEEeeCCCEEEEEEecC-----
Confidence 345789999999999987554 57889999998772113333221 12245999999999987421
Q ss_pred EEEEccCCCCCCCCCCceEeeecCCC--ceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEE
Q 011049 122 YILLNGRGFTPEGNIPFLDLFDINTG--SKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHIL 199 (494)
Q Consensus 122 ~~~~~~~g~~~~~~~~~l~~~d~~~g--~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~ 199 (494)
+ ......+|++++.++ +.+.|+.......+ + ....+.|++.+++...+. ...+++++
T Consensus 194 -------~---~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~-----~-----~~~~s~d~~~l~i~~~~~-~~~~~~l~ 252 (686)
T PRK10115 194 -------V---TLLPYQVWRHTIGTPASQDELVYEEKDDTFY-----V-----SLHKTTSKHYVVIHLASA-TTSEVLLL 252 (686)
T ss_pred -------C---CCCCCEEEEEECCCChhHCeEEEeeCCCCEE-----E-----EEEEcCCCCEEEEEEECC-ccccEEEE
Confidence 0 012246999999988 55667764322110 0 112344677666555443 33566766
Q ss_pred Ec
Q 011049 200 SW 201 (494)
Q Consensus 200 ~~ 201 (494)
+.
T Consensus 253 ~~ 254 (686)
T PRK10115 253 DA 254 (686)
T ss_pred EC
Confidence 63
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00068 Score=66.30 Aligned_cols=87 Identities=10% Similarity=0.170 Sum_probs=61.6
Q ss_pred hhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC
Q 011049 288 TSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 367 (494)
Q Consensus 288 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~ 367 (494)
.....|.+.||.+- .+..|.|.++.........++++.+.++.+.+... ..++.++||||||.++..++..+|+
T Consensus 112 ~li~~L~~~GY~~~----~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g--~~kV~LVGHSMGGlva~~fl~~~p~ 185 (440)
T PLN02733 112 DMIEQLIKWGYKEG----KTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASG--GKKVNIISHSMGGLLVKCFMSLHSD 185 (440)
T ss_pred HHHHHHHHcCCccC----CCcccCCCCccccccHHHHHHHHHHHHHHHHHHcC--CCCEEEEEECHhHHHHHHHHHHCCH
Confidence 34567889999762 24455665555433345557788888887776532 3689999999999999999988876
Q ss_pred c----eeEEEeCCCCCC
Q 011049 368 L----FCCGIARSGSYN 380 (494)
Q Consensus 368 ~----~~a~v~~~~~~~ 380 (494)
. ++..|++++.+.
T Consensus 186 ~~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 186 VFEKYVNSWIAIAAPFQ 202 (440)
T ss_pred hHHhHhccEEEECCCCC
Confidence 4 577777776544
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0067 Score=49.44 Aligned_cols=120 Identities=8% Similarity=0.086 Sum_probs=62.8
Q ss_pred cEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCccccccc-----cccc-HHHHHhcCccccccCCCC-C
Q 011049 345 RIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRT-----LWEA-TNVYIEMSPITHANKIKK-P 417 (494)
Q Consensus 345 ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~sp~~~~~~~~~-P 417 (494)
.++|+|-|.|||.+.+++.++ -+++++ +.|.....-.-.++-.+... .|.. .......- ...+..++. .
T Consensus 60 ~p~ivGssLGGY~At~l~~~~--Girav~-~NPav~P~e~l~gylg~~en~ytg~~y~le~~hI~~l~-~~~~~~l~~p~ 135 (191)
T COG3150 60 SPLIVGSSLGGYYATWLGFLC--GIRAVV-FNPAVRPYELLTGYLGRPENPYTGQEYVLESRHIATLC-VLQFRELNRPR 135 (191)
T ss_pred CceEEeecchHHHHHHHHHHh--CChhhh-cCCCcCchhhhhhhcCCCCCCCCcceEEeehhhHHHHH-HhhccccCCCc
Confidence 489999999999999999987 345554 33433211000001001111 1100 01111111 112233333 3
Q ss_pred EEEEecCC-CCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 418 ILIIHGEV-DDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 418 ~li~~G~~-D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
.|.+-... |.... +.++.+.+... ...+..|..|.|.. ....+++|..|..
T Consensus 136 ~~~lL~qtgDEvLD--yr~a~a~y~~~-------~~~V~dgg~H~F~~---f~~~l~~i~aF~g 187 (191)
T COG3150 136 CLVLLSQTGDEVLD--YRQAVAYYHPC-------YEIVWDGGDHKFKG---FSRHLQRIKAFKG 187 (191)
T ss_pred EEEeecccccHHHH--HHHHHHHhhhh-------hheeecCCCccccc---hHHhHHHHHHHhc
Confidence 55555554 88655 55554444433 45677889999864 4467788888764
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0024 Score=63.41 Aligned_cols=142 Identities=11% Similarity=0.040 Sum_probs=78.1
Q ss_pred CceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCC---CchhHHHHHhCCeEEEeCCCCCCCC
Q 011049 234 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGM---TPTSSLIFLARRFAVLAGPSIPIIG 310 (494)
Q Consensus 234 g~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~G~~v~~~~~~~~~g 310 (494)
+..+..|++...+ ++. ..|+|+|++|||..+.-.....--+|-.+..- .......|...+..++. +..-..|
T Consensus 60 ~~~lFyw~~~s~~-~~~---~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~i-DqP~G~G 134 (462)
T PTZ00472 60 DKHYFYWAFGPRN-GNP---EAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYV-DQPAGVG 134 (462)
T ss_pred CceEEEEEEEcCC-CCC---CCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEE-eCCCCcC
Confidence 5678888887764 222 27999999999855421111010111111100 00111134455555554 3211234
Q ss_pred CCCCCCC--chhHHHHHHHHHHHHHHHHHc-CCCCCCcEEEEecChHHHHHHHHHHhC----C------CceeEEEeCCC
Q 011049 311 EGDKLPN--DRFVEQLVSSAEAAVEEVVRR-GVADPSRIAVGGHSYGAFMTAHLLAHA----P------HLFCCGIARSG 377 (494)
Q Consensus 311 ~g~~~~~--~~~~~~~~~d~~~~v~~l~~~-~~~d~~ri~i~G~S~GG~~a~~~~~~~----p------~~~~a~v~~~~ 377 (494)
++..... ....+..++|+..+++.+.++ +.....++.|+|+||||..+..++.+- . =.+++++...|
T Consensus 135 ~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg 214 (462)
T PTZ00472 135 FSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNG 214 (462)
T ss_pred cccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecc
Confidence 4332211 122355678888888755543 334457899999999999887766541 0 13688888888
Q ss_pred CCC
Q 011049 378 SYN 380 (494)
Q Consensus 378 ~~~ 380 (494)
+.+
T Consensus 215 ~~d 217 (462)
T PTZ00472 215 LTD 217 (462)
T ss_pred ccC
Confidence 765
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0094 Score=55.75 Aligned_cols=141 Identities=9% Similarity=0.028 Sum_probs=78.8
Q ss_pred CccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
+..+.|+++|+ ++++...............|+|||+.++..... ...+++.++.++ +........ .
T Consensus 8 ~~d~~v~~~d~---~t~~~~~~~~~~~~~~~l~~~~dg~~l~~~~~~---~~~v~~~d~~~~--~~~~~~~~~-~----- 73 (300)
T TIGR03866 8 EKDNTISVIDT---ATLEVTRTFPVGQRPRGITLSKDGKLLYVCASD---SDTIQVIDLATG--EVIGTLPSG-P----- 73 (300)
T ss_pred cCCCEEEEEEC---CCCceEEEEECCCCCCceEECCCCCEEEEEECC---CCeEEEEECCCC--cEEEeccCC-C-----
Confidence 34568999998 666655544433334568899999876655322 457888888876 433322111 1
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcc
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEE 174 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~ 174 (494)
....+.|+|||+.++.... ... .+.++|+.+++.......... ....
T Consensus 74 -~~~~~~~~~~g~~l~~~~~------------------~~~--~l~~~d~~~~~~~~~~~~~~~------------~~~~ 120 (300)
T TIGR03866 74 -DPELFALHPNGKILYIANE------------------DDN--LVTVIDIETRKVLAEIPVGVE------------PEGM 120 (300)
T ss_pred -CccEEEECCCCCEEEEEcC------------------CCC--eEEEEECCCCeEEeEeeCCCC------------cceE
Confidence 1113348999987755431 111 388888877543221111100 0124
Q ss_pred cccccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 175 DINLNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 175 ~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
.++||+..+++.... ...++.++.++++
T Consensus 121 ~~~~dg~~l~~~~~~---~~~~~~~d~~~~~ 148 (300)
T TIGR03866 121 AVSPDGKIVVNTSET---TNMAHFIDTKTYE 148 (300)
T ss_pred EECCCCCEEEEEecC---CCeEEEEeCCCCe
Confidence 788888877664432 2234556665544
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.024 Score=50.84 Aligned_cols=225 Identities=16% Similarity=0.167 Sum_probs=125.8
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCC-chhHHHHHhCCeEEEe
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMT-PTSSLIFLARRFAVLA 302 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~G~~v~~ 302 (494)
.++..+++..| .++..++--+. ++.|+|+-.|.-+....+ .|..+. ....+.+..+ |.|+.
T Consensus 22 ~~e~~V~T~~G-~v~V~V~Gd~~------~~kpaiiTyhDlglN~~s----------cFq~ff~~p~m~ei~~~-fcv~H 83 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYGDPK------GNKPAIITYHDLGLNHKS----------CFQGFFNFPDMAEILEH-FCVYH 83 (326)
T ss_pred ceeeeeccccc-cEEEEEecCCC------CCCceEEEecccccchHh----------HhHHhhcCHhHHHHHhh-eEEEe
Confidence 44556666666 67777774332 236889999975533221 122222 1234455666 88887
Q ss_pred CCCCCCCCCCCC-CCCc---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC
Q 011049 303 GPSIPIIGEGDK-LPND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 303 ~~~~~~~g~g~~-~~~~---~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 378 (494)
++..|. ..|.. .+.. ...+++.+++..+++++ +. +-|.-+|--.|+++-..+|..||+++-+.|++++.
T Consensus 84 V~~PGq-e~gAp~~p~~y~yPsmd~LAd~l~~VL~~f---~l---k~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~ 156 (326)
T KOG2931|consen 84 VDAPGQ-EDGAPSFPEGYPYPSMDDLADMLPEVLDHF---GL---KSVIGMGVGAGAYILARFALNHPERVLGLVLINCD 156 (326)
T ss_pred cCCCcc-ccCCccCCCCCCCCCHHHHHHHHHHHHHhc---Cc---ceEEEecccccHHHHHHHHhcChhheeEEEEEecC
Confidence 555322 11211 1111 12456667777776665 22 56888999999999999999999999999998875
Q ss_pred CCCCC-CCC-------------C-------------ccccc-cc--------------------ccccHHHHHhcCcccc
Q 011049 379 YNKTL-TPF-------------G-------------FQTEF-RT--------------------LWEATNVYIEMSPITH 410 (494)
Q Consensus 379 ~~~~~-~~~-------------~-------------~~~~~-~~--------------------~~~~~~~~~~~sp~~~ 410 (494)
..... ..| + |..+. +. .+...+.|.....+..
T Consensus 157 ~~a~gwiew~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~ 236 (326)
T KOG2931|consen 157 PCAKGWIEWAYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSI 236 (326)
T ss_pred CCCchHHHHHHHHHHHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccc
Confidence 43110 000 0 00000 00 0000112222222111
Q ss_pred -cc----CCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 411 -AN----KIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 411 -~~----~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
.. .+++|+|++.|.+-+. .+...++-.+|.. ..+.++...+.|--.. .+.+.+..+.+.=|+.
T Consensus 237 ~r~~~~~tlkc~vllvvGd~Sp~----~~~vv~~n~~Ldp--~~ttllk~~d~g~l~~-e~qP~kl~ea~~~Flq 304 (326)
T KOG2931|consen 237 ERPKLGTTLKCPVLLVVGDNSPH----VSAVVECNSKLDP--TYTTLLKMADCGGLVQ-EEQPGKLAEAFKYFLQ 304 (326)
T ss_pred cCCCcCccccccEEEEecCCCch----hhhhhhhhcccCc--ccceEEEEcccCCccc-ccCchHHHHHHHHHHc
Confidence 11 4569999999999987 4566677776654 3467777777766443 3344455544444443
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.12 Score=47.39 Aligned_cols=178 Identities=15% Similarity=0.070 Sum_probs=95.0
Q ss_pred ccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCcc
Q 011049 40 DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDE 119 (494)
Q Consensus 40 ~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~ 119 (494)
+.+-..++.+|+...+++.+.|- ..-.+++|..++. ....+...++..+| +.-+ +||||++++-+.+.-
T Consensus 4 P~RgH~~a~~p~~~~avafaRRP--G~~~~v~D~~~g~-~~~~~~a~~gRHFy---GHg~--fs~dG~~LytTEnd~--- 72 (305)
T PF07433_consen 4 PARGHGVAAHPTRPEAVAFARRP--GTFALVFDCRTGQ-LLQRLWAPPGRHFY---GHGV--FSPDGRLLYTTENDY--- 72 (305)
T ss_pred CccccceeeCCCCCeEEEEEeCC--CcEEEEEEcCCCc-eeeEEcCCCCCEEe---cCEE--EcCCCCEEEEecccc---
Confidence 34556788999555555444443 4678899998872 33345444444444 3444 899999776554321
Q ss_pred ceEEEEccCCCCCCCCCCceEeeecCCCceEEE--EeeCcchhhhheeeeccCCCcccccccCcEEEEEEecC-CC----
Q 011049 120 QIYILLNGRGFTPEGNIPFLDLFDINTGSKERI--WESNREKYFETAVALVFGQGEEDINLNQLKILTSKESK-TE---- 192 (494)
Q Consensus 120 ~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l--~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~-~~---- 192 (494)
+..+-.|-++|+..+ .+++ |...|. + -.+..+.|||.++++-..+- +.
T Consensus 73 -------------~~g~G~IgVyd~~~~-~~ri~E~~s~GI----G-------PHel~l~pDG~tLvVANGGI~Thpd~G 127 (305)
T PF07433_consen 73 -------------ETGRGVIGVYDAARG-YRRIGEFPSHGI----G-------PHELLLMPDGETLVVANGGIETHPDSG 127 (305)
T ss_pred -------------CCCcEEEEEEECcCC-cEEEeEecCCCc----C-------hhhEEEcCCCCEEEEEcCCCccCcccC
Confidence 112224777887732 3332 333221 0 01235567776666543221 11
Q ss_pred ---------CCeEEEEEcCCCceeEeecCCCCCCcccccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecC
Q 011049 193 ---------ITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYP 263 (494)
Q Consensus 193 ---------p~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hG 263 (494)
-|.|..+|..+++...--.++ +.......+.+.+. .||..+.+.-|..+.. ..|.+|.+|-
T Consensus 128 R~kLNl~tM~psL~~ld~~sG~ll~q~~Lp---~~~~~lSiRHLa~~-~~G~V~~a~Q~qg~~~------~~~PLva~~~ 197 (305)
T PF07433_consen 128 RAKLNLDTMQPSLVYLDARSGALLEQVELP---PDLHQLSIRHLAVD-GDGTVAFAMQYQGDPG------DAPPLVALHR 197 (305)
T ss_pred ceecChhhcCCceEEEecCCCceeeeeecC---ccccccceeeEEec-CCCcEEEEEecCCCCC------ccCCeEEEEc
Confidence 235666666666533222221 12233445666665 6788888888876532 1344566664
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.024 Score=50.06 Aligned_cols=154 Identities=20% Similarity=0.174 Sum_probs=84.5
Q ss_pred hhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCC--cEEEEecChHHHHHHHHHHhC
Q 011049 288 TSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPS--RIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 288 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~--ri~i~G~S~GG~~a~~~~~~~ 365 (494)
.....|+++||+|++.++... . ...............+++.|.+++..++. .++=+|||+|.-+-+.+....
T Consensus 38 ~lLe~La~~Gy~ViAtPy~~t--f----DH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~ 111 (250)
T PF07082_consen 38 YLLERLADRGYAVIATPYVVT--F----DHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLF 111 (250)
T ss_pred HHHHHHHhCCcEEEEEecCCC--C----cHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhc
Confidence 455678899999999665321 1 11222334455566677778776544433 577899999999988877666
Q ss_pred CCceeEEEeCCCCCCC---CCCCC------Cccccc-ccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHH
Q 011049 366 PHLFCCGIARSGSYNK---TLTPF------GFQTEF-RTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQ 435 (494)
Q Consensus 366 p~~~~a~v~~~~~~~~---~~~~~------~~~~~~-~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~ 435 (494)
+..-++-|.++ .-|. ...+. .+..+. .++-+......+.- .-..+|++-=.+|. .++
T Consensus 112 ~~~r~gniliS-FNN~~a~~aIP~~~~l~~~l~~EF~PsP~ET~~li~~~Y-------~~~rnLLIkF~~D~-----iDq 178 (250)
T PF07082_consen 112 DVERAGNILIS-FNNFPADEAIPLLEQLAPALRLEFTPSPEETRRLIRESY-------QVRRNLLIKFNDDD-----IDQ 178 (250)
T ss_pred cCcccceEEEe-cCChHHHhhCchHhhhccccccCccCCHHHHHHHHHHhc-------CCccceEEEecCCC-----ccc
Confidence 43323333332 1110 00010 000010 11111111111110 12346777777777 578
Q ss_pred HHHHHHHHHhCCC-cEEEEEcCCCCCc
Q 011049 436 AERFFDALKGHGA-LSRLVLLPFEHHV 461 (494)
Q Consensus 436 ~~~~~~~l~~~g~-~~~~~~~~~~~H~ 461 (494)
+..+.+.|+.+.. -++....+| .|.
T Consensus 179 t~~L~~~L~~r~~~~~~~~~L~G-~HL 204 (250)
T PF07082_consen 179 TDELEQILQQRFPDMVSIQTLPG-NHL 204 (250)
T ss_pred hHHHHHHHhhhccccceEEeCCC-CCC
Confidence 8899999987632 256677776 685
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.00045 Score=65.14 Aligned_cols=111 Identities=13% Similarity=0.023 Sum_probs=58.9
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh---CCeEEEeCCCCCCCCCCCCCC-CchhHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA---RRFAVLAGPSIPIIGEGDKLP-NDRFVEQLVSSAEA 330 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~G~~v~~~~~~~~~g~g~~~~-~~~~~~~~~~d~~~ 330 (494)
.|++|++||.. +... -..+.......+.. +.+.|+.+|-.. +...... ...........+..
T Consensus 71 ~pt~iiiHGw~-----------~~~~-~~~~~~~~~~all~~~~~d~NVI~VDWs~--~a~~~Y~~a~~n~~~vg~~la~ 136 (331)
T PF00151_consen 71 KPTVIIIHGWT-----------GSGS-SESWIQDMIKALLQKDTGDYNVIVVDWSR--GASNNYPQAVANTRLVGRQLAK 136 (331)
T ss_dssp SEEEEEE--TT------------TT--TTTHHHHHHHHHHCC--S-EEEEEEE-HH--HHSS-HHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEcCcC-----------Cccc-chhHHHHHHHHHHhhccCCceEEEEcchh--hccccccchhhhHHHHHHHHHH
Confidence 79999999953 1110 00111112223333 589999855421 1110000 00112223445566
Q ss_pred HHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC--ceeEEEeCCCCC
Q 011049 331 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH--LFCCGIARSGSY 379 (494)
Q Consensus 331 ~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~--~~~a~v~~~~~~ 379 (494)
.+..|.+...++.++|.|+|||.||+++..+..+... ++..+.++.|..
T Consensus 137 ~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAg 187 (331)
T PF00151_consen 137 FLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAG 187 (331)
T ss_dssp HHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-
T ss_pred HHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccc
Confidence 6777875555889999999999999999999888766 678888877753
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.00097 Score=63.58 Aligned_cols=125 Identities=24% Similarity=0.238 Sum_probs=77.3
Q ss_pred EEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCC-eEEEeCCCC-CCCCC---
Q 011049 237 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR-FAVLAGPSI-PIIGE--- 311 (494)
Q Consensus 237 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-~~v~~~~~~-~~~g~--- 311 (494)
+..-++.|. .++.+ .-++||++|||+-+++++-.+..+ ..|++.+ .+|+..+|| |..|+
T Consensus 121 LYlNVW~P~-~~p~n---~tVlVWiyGGGF~sGt~SLdvYdG------------k~la~~envIvVs~NYRvG~FGFL~l 184 (601)
T KOG4389|consen 121 LYLNVWAPA-ADPYN---LTVLVWIYGGGFYSGTPSLDVYDG------------KFLAAVENVIVVSMNYRVGAFGFLYL 184 (601)
T ss_pred eEEEEeccC-CCCCC---ceEEEEEEcCccccCCcceeeecc------------ceeeeeccEEEEEeeeeeccceEEec
Confidence 666677774 22333 349999999998777665443322 1345544 445555654 33332
Q ss_pred -CCCCCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHhC--CCceeEEEeCCCCCC
Q 011049 312 -GDKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYN 380 (494)
Q Consensus 312 -g~~~~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~~--p~~~~a~v~~~~~~~ 380 (494)
|..+. -++...-|..-|++|+.++ ..-||+||.++|.|+|+.-+.+-+..- ..+|+-+|+.+|-.+
T Consensus 185 ~~~~ea---PGNmGl~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 185 PGHPEA---PGNMGLLDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLN 256 (601)
T ss_pred CCCCCC---CCccchHHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCC
Confidence 22222 2334466777889999876 235899999999999986554322221 147888898888655
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0022 Score=56.37 Aligned_cols=71 Identities=18% Similarity=0.239 Sum_probs=40.3
Q ss_pred hhHHHHHhCCeE---EEeCCCCCCCCCCCCCCCchh---HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHH
Q 011049 288 TSSLIFLARRFA---VLAGPSIPIIGEGDKLPNDRF---VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL 361 (494)
Q Consensus 288 ~~~~~l~~~G~~---v~~~~~~~~~g~g~~~~~~~~---~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~ 361 (494)
.....|.++||. |+..++ |.+........ ..+.+..+.+.|+.+++.- -. +|=|+|||+||.++-++
T Consensus 20 ~~~~~l~~~GY~~~~vya~ty----g~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~T--Ga-kVDIVgHS~G~~iaR~y 92 (219)
T PF01674_consen 20 TLAPYLKAAGYCDSEVYALTY----GSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYT--GA-KVDIVGHSMGGTIARYY 92 (219)
T ss_dssp HHHHHHHHTT--CCCEEEE------S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHH--T---EEEEEETCHHHHHHHH
T ss_pred HHHHHHHHcCCCcceeEeccC----CCCCCCCcccccccchhhHHHHHHHHHHHHHhh--CC-EEEEEEcCCcCHHHHHH
Confidence 456689999999 676444 21111001001 1123466777777776542 35 89999999999999988
Q ss_pred HHhC
Q 011049 362 LAHA 365 (494)
Q Consensus 362 ~~~~ 365 (494)
+...
T Consensus 93 i~~~ 96 (219)
T PF01674_consen 93 IKGG 96 (219)
T ss_dssp HHHC
T ss_pred HHHc
Confidence 7643
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0058 Score=54.79 Aligned_cols=109 Identities=12% Similarity=0.150 Sum_probs=67.4
Q ss_pred ceeeeccCCCCCCCCCee--cc-ccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 18 DIIYTQPAEPAEGEKPEI--LH-KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~--lt-~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
+.|.|.|+...+.|--+. ++ ....+.....||||||.|+.++ ..+.++++|.=.| +.+.-+...... ...
T Consensus 162 ~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT----~~s~~~~lDAf~G--~~~~tfs~~~~~-~~~ 234 (311)
T KOG1446|consen 162 ELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLST----NASFIYLLDAFDG--TVKSTFSGYPNA-GNL 234 (311)
T ss_pred CeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEe----CCCcEEEEEccCC--cEeeeEeeccCC-CCc
Confidence 367777775554343332 22 1233445788999999999875 3567999998777 433333322211 111
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeC
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESN 156 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~ 156 (494)
|. ..+++|||++|+-.+. ++ +|.++++++|+....|..+
T Consensus 235 ~~--~a~ftPds~Fvl~gs~------------------dg---~i~vw~~~tg~~v~~~~~~ 273 (311)
T KOG1446|consen 235 PL--SATFTPDSKFVLSGSD------------------DG---TIHVWNLETGKKVAVLRGP 273 (311)
T ss_pred ce--eEEECCCCcEEEEecC------------------CC---cEEEEEcCCCcEeeEecCC
Confidence 22 2348999998876541 12 3888888999887777764
|
|
| >KOG2139 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.01 Score=54.35 Aligned_cols=96 Identities=17% Similarity=0.096 Sum_probs=53.7
Q ss_pred cccCCCCCCCCCccc-eeeeccCCCCCCCCCeecc-ccccccccceecCCCceEEEEeeeeccceEEEEEc-CCCCCCCc
Q 011049 4 AQDRGDANVEVSPRD-IIYTQPAEPAEGEKPEILH-KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVC-PGSKDVAP 80 (494)
Q Consensus 4 ~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~lt-~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~-~~~g~~~~ 80 (494)
|.+.|+.=...++.+ .|-++|. +.+.-.+|. .+.+..+-..|||||.+|+-.+ -+. .-.+|-.. .-+. +.
T Consensus 203 wn~dgt~l~tAS~gsssi~iWdp---dtg~~~pL~~~glgg~slLkwSPdgd~lfaAt-~da-vfrlw~e~q~wt~--er 275 (445)
T KOG2139|consen 203 WNEDGTILVTASFGSSSIMIWDP---DTGQKIPLIPKGLGGFSLLKWSPDGDVLFAAT-CDA-VFRLWQENQSWTK--ER 275 (445)
T ss_pred EcCCCCEEeecccCcceEEEEcC---CCCCcccccccCCCceeeEEEcCCCCEEEEec-ccc-eeeeehhccccee--cc
Confidence 455566544444433 6677777 666666666 5666677889999999865433 222 23444211 1111 11
Q ss_pred eEeeecccccccCCCCCCceeeCCCCCEEEEEEec
Q 011049 81 RVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKK 115 (494)
Q Consensus 81 ~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~ 115 (494)
-.+ .++.. .. -+|||+|++|+|....
T Consensus 276 w~l--gsgrv-----qt--acWspcGsfLLf~~sg 301 (445)
T KOG2139|consen 276 WIL--GSGRV-----QT--ACWSPCGSFLLFACSG 301 (445)
T ss_pred eec--cCCce-----ee--eeecCCCCEEEEEEcC
Confidence 111 11111 22 2499999999998753
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.024 Score=53.72 Aligned_cols=89 Identities=9% Similarity=-0.042 Sum_probs=49.9
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEee------eeccceEEEEEcCCCCCCCce-Eeeeccccc
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETW------YKTSQTRTWLVCPGSKDVAPR-VLFDRVFEN 90 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~------~~~~~~~~~~~~~~~g~~~~~-~lt~~~~~~ 90 (494)
++|+++|. +.++...-......-.. ..||||+.|+.... ++.+...|-++|+.+. +.. .|--.+...
T Consensus 27 ~~v~ViD~---~~~~v~g~i~~G~~P~~-~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~--~~~~~i~~p~~p~ 100 (352)
T TIGR02658 27 TQVYTIDG---EAGRVLGMTDGGFLPNP-VVASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTH--LPIADIELPEGPR 100 (352)
T ss_pred ceEEEEEC---CCCEEEEEEEccCCCce-eECCCCCEEEEEeccccccccCCCCCEEEEEECccC--cEEeEEccCCCch
Confidence 78999998 65554332222222233 59999999887664 2224568889998876 322 222211111
Q ss_pred ccCCCCCCceeeCCCCCEEEEE
Q 011049 91 VYSDPGSPMMTRTSTGTNVIAK 112 (494)
Q Consensus 91 ~~~~~~~~~~~~spDG~~i~~~ 112 (494)
+...+..-.+..||||+++++.
T Consensus 101 ~~~~~~~~~~~ls~dgk~l~V~ 122 (352)
T TIGR02658 101 FLVGTYPWMTSLTPDNKTLLFY 122 (352)
T ss_pred hhccCccceEEECCCCCEEEEe
Confidence 1111111133489999988764
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG0293 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0077 Score=55.98 Aligned_cols=126 Identities=14% Similarity=0.139 Sum_probs=74.6
Q ss_pred eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCC--ceeeCCCCCEEEEE
Q 011049 35 ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP--MMTRTSTGTNVIAK 112 (494)
Q Consensus 35 ~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~--~~~~spDG~~i~~~ 112 (494)
.|+......=-..|||+||+||-.+...+ .-+|.+..++ ..+....-.+. ..| .+.||||.++++-.
T Consensus 219 il~~htdEVWfl~FS~nGkyLAsaSkD~T--aiiw~v~~d~---~~kl~~tlvgh------~~~V~yi~wSPDdryLlaC 287 (519)
T KOG0293|consen 219 ILQDHTDEVWFLQFSHNGKYLASASKDST--AIIWIVVYDV---HFKLKKTLVGH------SQPVSYIMWSPDDRYLLAC 287 (519)
T ss_pred hHhhCCCcEEEEEEcCCCeeEeeccCCce--EEEEEEecCc---ceeeeeeeecc------cCceEEEEECCCCCeEEec
Confidence 34444333335679999999997765433 5677777665 33333332222 122 23499999988765
Q ss_pred EeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCC
Q 011049 113 IKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTE 192 (494)
Q Consensus 113 ~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~ 192 (494)
.. +. -+.++|+.+|+....+...-. | + ..+..|-|||..++. .++.
T Consensus 288 g~------------------~e---~~~lwDv~tgd~~~~y~~~~~--~-------S-~~sc~W~pDg~~~V~--Gs~d- 333 (519)
T KOG0293|consen 288 GF------------------DE---VLSLWDVDTGDLRHLYPSGLG--F-------S-VSSCAWCPDGFRFVT--GSPD- 333 (519)
T ss_pred Cc------------------hH---heeeccCCcchhhhhcccCcC--C-------C-cceeEEccCCceeEe--cCCC-
Confidence 41 11 278889999887665543300 0 1 123578899977553 3333
Q ss_pred CCeEEEEEcCCCce
Q 011049 193 ITQYHILSWPLKKS 206 (494)
Q Consensus 193 p~~l~~~~~~~~~~ 206 (494)
..++..++++...
T Consensus 334 -r~i~~wdlDgn~~ 346 (519)
T KOG0293|consen 334 -RTIIMWDLDGNIL 346 (519)
T ss_pred -CcEEEecCCcchh
Confidence 5678888776543
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0062 Score=60.28 Aligned_cols=148 Identities=10% Similarity=-0.024 Sum_probs=74.5
Q ss_pred EEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCC----CchhHHHHHhCCeEEEeC
Q 011049 228 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGM----TPTSSLIFLARRFAVLAG 303 (494)
Q Consensus 228 ~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~G~~v~~~ 303 (494)
.+....+..+..|++...+ ++.. .|+|+|+.|||.++.-.....--+|-....- .......|... ..++.+
T Consensus 17 ~~~~~~~~~lfyw~~~s~~-~~~~---~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~i 91 (415)
T PF00450_consen 17 PVNDNENAHLFYWFFESRN-DPED---DPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLFI 91 (415)
T ss_dssp EECTTTTEEEEEEEEE-SS-GGCS---S-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEEE
T ss_pred ecCCCCCcEEEEEEEEeCC-CCCC---ccEEEEecCCceeccccccccccCceEEeecccccccccccccccc-cceEEE
Confidence 3333456788888887665 3332 7999999999854421110000111111100 00111122333 333333
Q ss_pred CCCCCCCCCCCCCCch---hHHHHHHHHHHHHH-HHHHcCCCCCCcEEEEecChHHHHHHHHHH----hC------CCce
Q 011049 304 PSIPIIGEGDKLPNDR---FVEQLVSSAEAAVE-EVVRRGVADPSRIAVGGHSYGAFMTAHLLA----HA------PHLF 369 (494)
Q Consensus 304 ~~~~~~g~g~~~~~~~---~~~~~~~d~~~~v~-~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~----~~------p~~~ 369 (494)
|..-..|+........ ..++..+|+..++. ++.+.+.....++.|+|.||||..+..+|. .. +=.+
T Consensus 92 D~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inL 171 (415)
T PF00450_consen 92 DQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINL 171 (415)
T ss_dssp --STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEE
T ss_pred eecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccc
Confidence 4322345443322222 23556777777775 444445555668999999999987655543 33 2247
Q ss_pred eEEEeCCCCCC
Q 011049 370 CCGIARSGSYN 380 (494)
Q Consensus 370 ~a~v~~~~~~~ 380 (494)
++++...|+++
T Consensus 172 kGi~IGng~~d 182 (415)
T PF00450_consen 172 KGIAIGNGWID 182 (415)
T ss_dssp EEEEEESE-SB
T ss_pred ccceecCcccc
Confidence 89999888865
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0059 Score=54.84 Aligned_cols=78 Identities=18% Similarity=0.192 Sum_probs=44.1
Q ss_pred HHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC---CCc
Q 011049 292 IFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---PHL 368 (494)
Q Consensus 292 ~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~---p~~ 368 (494)
.+...++.|+.... .|.+.........++++.+..+.| .+.. ...++.++|||+||.+|..+|.+- ...
T Consensus 22 ~l~~~~~~v~~i~~---~~~~~~~~~~~si~~la~~y~~~I---~~~~--~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~ 93 (229)
T PF00975_consen 22 ALPDDVIGVYGIEY---PGRGDDEPPPDSIEELASRYAEAI---RARQ--PEGPYVLAGWSFGGILAFEMARQLEEAGEE 93 (229)
T ss_dssp HHTTTEEEEEEECS---TTSCTTSHEESSHHHHHHHHHHHH---HHHT--SSSSEEEEEETHHHHHHHHHHHHHHHTT-S
T ss_pred hCCCCeEEEEEEec---CCCCCCCCCCCCHHHHHHHHHHHh---hhhC--CCCCeeehccCccHHHHHHHHHHHHHhhhc
Confidence 33333466766333 233222223333455665554444 3332 123899999999999999887643 234
Q ss_pred eeEEEeCCC
Q 011049 369 FCCGIARSG 377 (494)
Q Consensus 369 ~~a~v~~~~ 377 (494)
+..++++.+
T Consensus 94 v~~l~liD~ 102 (229)
T PF00975_consen 94 VSRLILIDS 102 (229)
T ss_dssp ESEEEEESC
T ss_pred cCceEEecC
Confidence 666776664
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.022 Score=55.15 Aligned_cols=128 Identities=13% Similarity=0.146 Sum_probs=77.5
Q ss_pred CCccc--eeeeccCCCCCCCCCe-eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc
Q 011049 14 VSPRD--IIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN 90 (494)
Q Consensus 14 ~~~~~--~i~~~~~~~~~~~~~~-~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~ 90 (494)
.+|.| .||+++. +|...+ .|+ .++-.+..+|||+|+.++.+.-. ....+-+.++++. .+++...
T Consensus 245 ~SYYGEq~Lyll~t---~g~s~~V~L~-k~GPVhdv~W~~s~~EF~VvyGf--MPAkvtifnlr~~-----~v~df~e-- 311 (566)
T KOG2315|consen 245 ASYYGEQTLYLLAT---QGESVSVPLL-KEGPVHDVTWSPSGREFAVVYGF--MPAKVTIFNLRGK-----PVFDFPE-- 311 (566)
T ss_pred ccccccceEEEEEe---cCceEEEecC-CCCCceEEEECCCCCEEEEEEec--ccceEEEEcCCCC-----EeEeCCC--
Confidence 46666 8999998 644433 344 33456788999999998876532 4567778887653 4544332
Q ss_pred ccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccC
Q 011049 91 VYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFG 170 (494)
Q Consensus 91 ~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~ 170 (494)
+|.+-++ |||-|..|++..-+ ...++ +-++|+.+. +.+...... .
T Consensus 312 ---gpRN~~~-fnp~g~ii~lAGFG---------------NL~G~---mEvwDv~n~--K~i~~~~a~-----------~ 356 (566)
T KOG2315|consen 312 ---GPRNTAF-FNPHGNIILLAGFG---------------NLPGD---MEVWDVPNR--KLIAKFKAA-----------N 356 (566)
T ss_pred ---CCccceE-ECCCCCEEEEeecC---------------CCCCc---eEEEeccch--hhccccccC-----------C
Confidence 2344444 99999977776421 12233 778888773 333322211 1
Q ss_pred CCcccccccCcEEEEEEec
Q 011049 171 QGEEDINLNQLKILTSKES 189 (494)
Q Consensus 171 ~~~~~~s~d~~~~~~~~~s 189 (494)
..-.+|+|||..++....+
T Consensus 357 tt~~eW~PdGe~flTATTa 375 (566)
T KOG2315|consen 357 TTVFEWSPDGEYFLTATTA 375 (566)
T ss_pred ceEEEEcCCCcEEEEEecc
Confidence 1124899999887765444
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.015 Score=49.37 Aligned_cols=111 Identities=16% Similarity=0.103 Sum_probs=55.8
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCcc-CCCCchhHHHHHhCCeEEEeCCCCCCCCCCCC-CCCchhHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEF-SGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK-LPNDRFVEQLVSSAEAAV 332 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~-~~~~~~~~~~~~d~~~~v 332 (494)
..++|++||.|.-..+.+..-.=-.+.. .+..-.+...-.+.||.|+..+.-..+-.-++ .....+....++-+.-..
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw 180 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVW 180 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHH
Confidence 5689999997642211110000000000 11111223344568999887333111111111 111222222233333333
Q ss_pred HHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC
Q 011049 333 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 367 (494)
Q Consensus 333 ~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~ 367 (494)
.+++.. ..+..++++.|||||++++.++.+.|+
T Consensus 181 ~~~v~p--a~~~sv~vvahsyGG~~t~~l~~~f~~ 213 (297)
T KOG3967|consen 181 KNIVLP--AKAESVFVVAHSYGGSLTLDLVERFPD 213 (297)
T ss_pred HHHhcc--cCcceEEEEEeccCChhHHHHHHhcCC
Confidence 444332 356889999999999999999999985
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0049 Score=47.28 Aligned_cols=60 Identities=28% Similarity=0.227 Sum_probs=47.0
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
..|+|++.++.|+..| +..++.+.+.|.. .++++.++.||+... ....-..+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP--~~~a~~~~~~l~~----s~lvt~~g~gHg~~~-~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTP--YEGARAMAARLPG----SRLVTVDGAGHGVYA-GGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCc--HHHHHHHHHHCCC----ceEEEEeccCcceec-CCChHHHHHHHHHHHc
Confidence 4899999999999987 9999999888865 489999999999763 2223455566677663
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.028 Score=56.08 Aligned_cols=131 Identities=17% Similarity=0.183 Sum_probs=81.4
Q ss_pred cCCCc--eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC
Q 011049 231 RKDGV--PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 308 (494)
Q Consensus 231 ~~dg~--~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 308 (494)
..++. .|...+++|.+++ + + ++.+-|||+... +. .-.... ....-+++||+++.-|. |.
T Consensus 9 ~~~~~~~~i~fev~LP~~WN-g-R-----~~~~GgGG~~G~-----i~----~~~~~~--~~~~~~~~G~A~~~TD~-Gh 69 (474)
T PF07519_consen 9 PSDGSAPNIRFEVWLPDNWN-G-R-----FLQVGGGGFAGG-----IN----YADGKA--SMATALARGYATASTDS-GH 69 (474)
T ss_pred cCCCCcceEEEEEECChhhc-c-C-----eEEECCCeeeCc-----cc----cccccc--ccchhhhcCeEEEEecC-CC
Confidence 34444 8899999999653 1 2 555555554221 11 000000 01234789999998443 33
Q ss_pred CCCCC----CCCC-----chhHHHHHHHHHHHHHHHHHcCC-CCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC
Q 011049 309 IGEGD----KLPN-----DRFVEQLVSSAEAAVEEVVRRGV-ADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 309 ~g~g~----~~~~-----~~~~~~~~~d~~~~v~~l~~~~~-~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 378 (494)
.+... ++.. .+|....+.+...+-+.|++..+ ..+++-...|.|-||-.++.+|-++|+.|.++++.+|.
T Consensus 70 ~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA 149 (474)
T PF07519_consen 70 QGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPA 149 (474)
T ss_pred CCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCch
Confidence 22211 1111 12233335555556666766533 56789999999999999999999999999999999997
Q ss_pred CC
Q 011049 379 YN 380 (494)
Q Consensus 379 ~~ 380 (494)
.+
T Consensus 150 ~~ 151 (474)
T PF07519_consen 150 IN 151 (474)
T ss_pred HH
Confidence 54
|
It also includes several bacterial homologues of unknown function. |
| >KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.44 Score=43.15 Aligned_cols=171 Identities=10% Similarity=0.018 Sum_probs=85.1
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc--ccC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN--VYS 93 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~--~~~ 93 (494)
....|.+||+ ...+.+-+..... -.-+++.|+|- +|..--++ ..|.+.|+..=+..|-+.+.-...+ .+
T Consensus 120 ~D~tvrLWDl---R~~~cqg~l~~~~-~pi~AfDp~GL--ifA~~~~~--~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew- 190 (311)
T KOG1446|consen 120 LDKTVRLWDL---RVKKCQGLLNLSG-RPIAAFDPEGL--IFALANGS--ELIKLYDLRSFDKGPFTTFSITDNDEAEW- 190 (311)
T ss_pred cCCeEEeeEe---cCCCCceEEecCC-CcceeECCCCc--EEEEecCC--CeEEEEEecccCCCCceeEccCCCCccce-
Confidence 3347888888 4344444433322 22357989884 44433222 2566666542111333322221111 11
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEee-CcchhhhheeeeccCCC
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES-NREKYFETAVALVFGQG 172 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~-~~~~~~~~~~~~~s~~~ 172 (494)
. .+.+|||||.|+...+. ..++++|.=.|....-... ... . ....
T Consensus 191 --~--~l~FS~dGK~iLlsT~~---------------------s~~~~lDAf~G~~~~tfs~~~~~----~-----~~~~ 236 (311)
T KOG1446|consen 191 --T--DLEFSPDGKSILLSTNA---------------------SFIYLLDAFDGTVKSTFSGYPNA----G-----NLPL 236 (311)
T ss_pred --e--eeEEcCCCCEEEEEeCC---------------------CcEEEEEccCCcEeeeEeeccCC----C-----Ccce
Confidence 1 12389999999987631 1377888777764332221 111 0 0012
Q ss_pred cccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecC-CCCCCcccccccEEEEEEcCC
Q 011049 173 EEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNF-PHPYPTLASLQKEMIKYQRKD 233 (494)
Q Consensus 173 ~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~-~~~~~~~~~~~~~~~~~~~~d 233 (494)
++.++||++.++. .+. -..|.+++++++.......- +..........++...+.+.+
T Consensus 237 ~a~ftPds~Fvl~-gs~---dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~ 294 (311)
T KOG1446|consen 237 SATFTPDSKFVLS-GSD---DGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSAS 294 (311)
T ss_pred eEEECCCCcEEEE-ecC---CCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecC
Confidence 5689999975543 322 35677888877765433332 111111122345555666554
|
|
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.042 Score=53.13 Aligned_cols=134 Identities=16% Similarity=0.177 Sum_probs=86.5
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHH-hCCeEEEeCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIP 307 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~~~ 307 (494)
|.+..+...+=+.|.+..+.... -|+.+++-|-+..+ ..|..........+| +.|-.|+....|
T Consensus 63 F~~~~~~~~Qq~~y~n~~~~~~~---gPiFLmIGGEgp~~-----------~~wv~~~~~~~~~~AkkfgA~v~~lEHR- 127 (514)
T KOG2182|consen 63 FDSSNGKFFQQRFYNNNQWAKPG---GPIFLMIGGEGPES-----------DKWVGNENLTWLQWAKKFGATVFQLEHR- 127 (514)
T ss_pred hhcchhhhhhhheeeccccccCC---CceEEEEcCCCCCC-----------CCccccCcchHHHHHHHhCCeeEEeeee-
Confidence 34445555556666676664322 58888886643211 123332322333444 478888873332
Q ss_pred CCCCCCCCC-------Cchh--HHHHHHHHHHHHHHHHHcC-CCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCC
Q 011049 308 IIGEGDKLP-------NDRF--VEQLVSSAEAAVEEVVRRG-VADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 377 (494)
Q Consensus 308 ~~g~g~~~~-------~~~~--~~~~~~d~~~~v~~l~~~~-~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 377 (494)
=||.+.+ +-++ ..+...|+...|+.+-.+. .-|+.+.+.+|.||-|.+++|+-..+|+++.++|+-++
T Consensus 128 --FYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSa 205 (514)
T KOG2182|consen 128 --FYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSA 205 (514)
T ss_pred --ccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccc
Confidence 3443321 1122 4567889999998887664 45556999999999999999999999999999998877
Q ss_pred CC
Q 011049 378 SY 379 (494)
Q Consensus 378 ~~ 379 (494)
..
T Consensus 206 pv 207 (514)
T KOG2182|consen 206 PV 207 (514)
T ss_pred ce
Confidence 64
|
|
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0031 Score=38.54 Aligned_cols=28 Identities=18% Similarity=0.312 Sum_probs=19.7
Q ss_pred eEeeecccccccCCCCCCceeeCCCCCEEEEEEec
Q 011049 81 RVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKK 115 (494)
Q Consensus 81 ~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~ 115 (494)
+++|...+.+ ..|. |||||++|+|.+..
T Consensus 2 ~~~t~~~~~~-----~~p~--~SpDGk~i~f~s~~ 29 (39)
T PF07676_consen 2 KQLTNSPGDD-----GSPA--WSPDGKYIYFTSNR 29 (39)
T ss_dssp EEES-SSSSE-----EEEE--E-TTSSEEEEEEEC
T ss_pred cCcccCCccc-----cCEE--EecCCCEEEEEecC
Confidence 5667766655 4566 99999999999864
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >KOG0293 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.036 Score=51.72 Aligned_cols=118 Identities=12% Similarity=0.152 Sum_probs=67.0
Q ss_pred cccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceE
Q 011049 43 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIY 122 (494)
Q Consensus 43 ~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~ 122 (494)
.....||||.++++-... ...+++-|+++| +.+.++... ..+ .....+|.|||.+++..+
T Consensus 272 V~yi~wSPDdryLlaCg~----~e~~~lwDv~tg--d~~~~y~~~-~~~----S~~sc~W~pDg~~~V~Gs--------- 331 (519)
T KOG0293|consen 272 VSYIMWSPDDRYLLACGF----DEVLSLWDVDTG--DLRHLYPSG-LGF----SVSSCAWCPDGFRFVTGS--------- 331 (519)
T ss_pred eEEEEECCCCCeEEecCc----hHheeeccCCcc--hhhhhcccC-cCC----CcceeEEccCCceeEecC---------
Confidence 345679999999875532 233777788887 656655443 111 222334999999876543
Q ss_pred EEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcC
Q 011049 123 ILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 202 (494)
Q Consensus 123 ~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~ 202 (494)
++ .+++.+|+++.. ..-|..-.. ..+ ....+++||.+++.... -+.+..++.+
T Consensus 332 ---------~d---r~i~~wdlDgn~-~~~W~gvr~------~~v----~dlait~Dgk~vl~v~~----d~~i~l~~~e 384 (519)
T KOG0293|consen 332 ---------PD---RTIIMWDLDGNI-LGNWEGVRD------PKV----HDLAITYDGKYVLLVTV----DKKIRLYNRE 384 (519)
T ss_pred ---------CC---CcEEEecCCcch-hhccccccc------cee----EEEEEcCCCcEEEEEec----ccceeeechh
Confidence 12 247778877643 223443211 001 12367788888877653 2456666655
Q ss_pred CCcee
Q 011049 203 LKKSS 207 (494)
Q Consensus 203 ~~~~~ 207 (494)
+...+
T Consensus 385 ~~~dr 389 (519)
T KOG0293|consen 385 ARVDR 389 (519)
T ss_pred hhhhh
Confidence 44333
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.2 Score=46.77 Aligned_cols=52 Identities=17% Similarity=0.122 Sum_probs=34.5
Q ss_pred ccceeeeccCCCCCCCCCeecccccc-ccccceecCCCceEEEEeeeeccceEEEEEcCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDL-RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPG 74 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~-~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~ 74 (494)
.-|.||.++. . +..+++..... .-.+.+|||||+.++|+- +...+||+++++
T Consensus 141 ~~G~lyr~~p---~-g~~~~l~~~~~~~~NGla~SpDg~tly~aD---T~~~~i~r~~~d 193 (307)
T COG3386 141 PTGSLYRVDP---D-GGVVRLLDDDLTIPNGLAFSPDGKTLYVAD---TPANRIHRYDLD 193 (307)
T ss_pred CcceEEEEcC---C-CCEEEeecCcEEecCceEECCCCCEEEEEe---CCCCeEEEEecC
Confidence 3347888875 4 44455544433 344789999999877753 335689999876
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0037 Score=58.49 Aligned_cols=56 Identities=25% Similarity=0.305 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCC
Q 011049 321 VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARS 376 (494)
Q Consensus 321 ~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~ 376 (494)
.++...|....+.+|++........|.++|.||||++++|+-.++|+.+.++++.+
T Consensus 144 seQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaS 199 (492)
T KOG2183|consen 144 SEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAAS 199 (492)
T ss_pred HHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhcc
Confidence 45778899999999988765667889999999999999999999999888777654
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.078 Score=50.92 Aligned_cols=131 Identities=8% Similarity=0.037 Sum_probs=64.5
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccc-cccCCCCCC-ceeeCCCCCEEEEEEeccCccceE
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFE-NVYSDPGSP-MMTRTSTGTNVIAKIKKENDEQIY 122 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~-~~~~~~~~~-~~~~spDG~~i~~~~~~~~~~~~~ 122 (494)
..+|+|||+.++.+... .+.|.+++++...+..+.+...... ..+.....+ -+..||||++|+.....
T Consensus 196 h~~f~pdg~~~Yv~~e~---s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~------- 265 (345)
T PF10282_consen 196 HLAFSPDGKYAYVVNEL---SNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRG------- 265 (345)
T ss_dssp EEEE-TTSSEEEEEETT---TTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECT-------
T ss_pred EEEEcCCcCEEEEecCC---CCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEecc-------
Confidence 35699999986665433 3456666655222243433322211 011100011 23479999988765421
Q ss_pred EEEccCCCCCCCCCCceEeeec--CCCceEEEEeeC--cchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEE
Q 011049 123 ILLNGRGFTPEGNIPFLDLFDI--NTGSKERIWESN--REKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHI 198 (494)
Q Consensus 123 ~~~~~~g~~~~~~~~~l~~~d~--~~g~~~~l~~~~--~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~ 198 (494)
.+ .|.++++ ++|+.+.+-... +. .+ ....++|||+.+++..+..+ .-.+|.
T Consensus 266 -----------~~--sI~vf~~d~~~g~l~~~~~~~~~G~----~P-------r~~~~s~~g~~l~Va~~~s~-~v~vf~ 320 (345)
T PF10282_consen 266 -----------SN--SISVFDLDPATGTLTLVQTVPTGGK----FP-------RHFAFSPDGRYLYVANQDSN-TVSVFD 320 (345)
T ss_dssp -----------TT--EEEEEEECTTTTTEEEEEEEEESSS----SE-------EEEEE-TTSSEEEEEETTTT-EEEEEE
T ss_pred -----------CC--EEEEEEEecCCCceEEEEEEeCCCC----Cc-------cEEEEeCCCCEEEEEecCCC-eEEEEE
Confidence 11 2444444 556665543221 11 01 12377899988887655432 235667
Q ss_pred EEcCCCceeEee
Q 011049 199 LSWPLKKSSQIT 210 (494)
Q Consensus 199 ~~~~~~~~~~lt 210 (494)
++.+++......
T Consensus 321 ~d~~tG~l~~~~ 332 (345)
T PF10282_consen 321 IDPDTGKLTPVG 332 (345)
T ss_dssp EETTTTEEEEEE
T ss_pred EeCCCCcEEEec
Confidence 777777766554
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG2055 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.026 Score=53.39 Aligned_cols=117 Identities=14% Similarity=0.102 Sum_probs=78.0
Q ss_pred ccCCC-CCCCCCccceeeeccCCCCCCCCCeecccccc----ccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCC
Q 011049 5 QDRGD-ANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL----RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVA 79 (494)
Q Consensus 5 ~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~lt~~~~----~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~ 79 (494)
.+.|+ -.+..+.|--+|.+|+ +.++..++....+ ....+..||||+.|++. +.++-|+++...++
T Consensus 266 ~p~G~~~i~~s~rrky~ysyDl---e~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~----G~~G~I~lLhakT~--- 335 (514)
T KOG2055|consen 266 APNGHSVIFTSGRRKYLYSYDL---ETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIA----GNNGHIHLLHAKTK--- 335 (514)
T ss_pred cCCCceEEEecccceEEEEeec---cccccccccCCCCcccchhheeEecCCCCeEEEc----ccCceEEeehhhhh---
Confidence 45666 3566777888999999 7666666544332 22356789999988885 34677888887765
Q ss_pred ceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcc
Q 011049 80 PRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNRE 158 (494)
Q Consensus 80 ~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~ 158 (494)
..++...-.. .-..++||.||+.|+.... .+ ++|++|+........|.++|.
T Consensus 336 -eli~s~KieG-----~v~~~~fsSdsk~l~~~~~------------------~G---eV~v~nl~~~~~~~rf~D~G~ 387 (514)
T KOG2055|consen 336 -ELITSFKIEG-----VVSDFTFSSDSKELLASGG------------------TG---EVYVWNLRQNSCLHRFVDDGS 387 (514)
T ss_pred -hhhheeeecc-----EEeeEEEecCCcEEEEEcC------------------Cc---eEEEEecCCcceEEEEeecCc
Confidence 3444433221 1112348999987665431 12 499999999888889998876
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.15 Score=49.24 Aligned_cols=100 Identities=8% Similarity=-0.031 Sum_probs=53.8
Q ss_pred ccceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
-.+.|.++|. +..+... +..+........+||||++++.. .+ ...|-++|+.... ..+.+-....
T Consensus 14 ~~~~v~viD~---~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~-~r---dg~vsviD~~~~~-~v~~i~~G~~------ 79 (369)
T PF02239_consen 14 GSGSVAVIDG---ATNKVVARIPTGGAPHAGLKFSPDGRYLYVA-NR---DGTVSVIDLATGK-VVATIKVGGN------ 79 (369)
T ss_dssp GGTEEEEEET---TT-SEEEEEE-STTEEEEEE-TT-SSEEEEE-ET---TSEEEEEETTSSS-EEEEEE-SSE------
T ss_pred CCCEEEEEEC---CCCeEEEEEcCCCCceeEEEecCCCCEEEEE-cC---CCeEEEEECCccc-EEEEEecCCC------
Confidence 3568999988 6555443 22222234567899999986654 33 3579999998762 1122221111
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEE
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKER 151 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~ 151 (494)
|.. +..||||++++..... ...+.++|.++.+..+
T Consensus 80 ~~~--i~~s~DG~~~~v~n~~--------------------~~~v~v~D~~tle~v~ 114 (369)
T PF02239_consen 80 PRG--IAVSPDGKYVYVANYE--------------------PGTVSVIDAETLEPVK 114 (369)
T ss_dssp EEE--EEE--TTTEEEEEEEE--------------------TTEEEEEETTT--EEE
T ss_pred cce--EEEcCCCCEEEEEecC--------------------CCceeEecccccccee
Confidence 112 2379999988765421 1148888988876544
|
... |
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.25 Score=44.83 Aligned_cols=86 Identities=16% Similarity=0.055 Sum_probs=48.3
Q ss_pred CCccceeeeccCCCCCCCCCeecccc------ccccccceecCCCceEEEEeeeec---cc--eEEEEEcCCCCCCCceE
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEILHKL------DLRFRSVSWCDDSLALVNETWYKT---SQ--TRTWLVCPGSKDVAPRV 82 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~lt~~------~~~~~~p~wspDg~~i~f~~~~~~---~~--~~~~~~~~~~g~~~~~~ 82 (494)
++..+.+.++|. ++++.+.+... .......++.|||+ |+|+..... .. ..+|+++.+ + +.+.
T Consensus 56 v~~~~~~~~~d~---~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~-~--~~~~ 128 (246)
T PF08450_consen 56 VADSGGIAVVDP---DTGKVTVLADLPDGGVPFNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPD-G--KVTV 128 (246)
T ss_dssp EEETTCEEEEET---TTTEEEEEEEEETTCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-S--EEEE
T ss_pred EEEcCceEEEec---CCCcEEEEeeccCCCcccCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCC-C--eEEE
Confidence 334445555566 55665555443 12333568999998 676654221 12 689999998 4 4455
Q ss_pred eeecccccccCCCCCCceeeCCCCCEEEEEE
Q 011049 83 LFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 83 lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
+..... .|+. ++|||||+.+++..
T Consensus 129 ~~~~~~-----~pNG--i~~s~dg~~lyv~d 152 (246)
T PF08450_consen 129 VADGLG-----FPNG--IAFSPDGKTLYVAD 152 (246)
T ss_dssp EEEEES-----SEEE--EEEETTSSEEEEEE
T ss_pred EecCcc-----cccc--eEECCcchheeecc
Confidence 443221 1122 33999999887764
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.046 Score=50.80 Aligned_cols=58 Identities=16% Similarity=0.126 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC--------CCceeEEEeCCCCCC
Q 011049 321 VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA--------PHLFCCGIARSGSYN 380 (494)
Q Consensus 321 ~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~--------p~~~~a~v~~~~~~~ 380 (494)
.+....++...+++|.+... ..+|.|++||||.++++.++-+- +.+|+-+|..+|=.|
T Consensus 170 ~~~Sr~aLe~~lr~La~~~~--~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 170 TNYSRPALERLLRYLATDKP--VKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred hhhhHHHHHHHHHHHHhCCC--CceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 34556788889999988764 37899999999999998876432 235677777777544
|
|
| >KOG2139 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.075 Score=48.88 Aligned_cols=99 Identities=13% Similarity=0.149 Sum_probs=51.9
Q ss_pred cccccCCCCCCCCCccceeeeccCCCCCC--CCC--------eecccc--ccccccceecCCCceEEEEeeeeccceEEE
Q 011049 2 VEAQDRGDANVEVSPRDIIYTQPAEPAEG--EKP--------EILHKL--DLRFRSVSWCDDSLALVNETWYKTSQTRTW 69 (494)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~--------~~lt~~--~~~~~~p~wspDg~~i~f~~~~~~~~~~~~ 69 (494)
++|++.+.-.+-+.-|+=|-++.+++ .. +++ -++.+. .....+.+|-+||..++-.+..+ ..+-
T Consensus 146 lawRPlsaselavgCr~gIciW~~s~-tln~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gs---ssi~ 221 (445)
T KOG2139|consen 146 LAWRPLSASELAVGCRAGICIWSDSR-TLNANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGS---SSIM 221 (445)
T ss_pred EEeccCCcceeeeeecceeEEEEcCc-ccccccccccccccchhheeCCCCceeeEEEEcCCCCEEeecccCc---ceEE
Confidence 35666665555565565555555421 11 111 122222 23445778999998777554322 3444
Q ss_pred EEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEE
Q 011049 70 LVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAK 112 (494)
Q Consensus 70 ~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~ 112 (494)
+-++++| ....|...... +--++.|||||.++.-.
T Consensus 222 iWdpdtg--~~~pL~~~glg------g~slLkwSPdgd~lfaA 256 (445)
T KOG2139|consen 222 IWDPDTG--QKIPLIPKGLG------GFSLLKWSPDGDVLFAA 256 (445)
T ss_pred EEcCCCC--CcccccccCCC------ceeeEEEcCCCCEEEEe
Confidence 4455555 44444422211 22256699999977544
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.096 Score=49.70 Aligned_cols=107 Identities=12% Similarity=0.102 Sum_probs=60.0
Q ss_pred CCccceeeeccCCCCCCCCCeec------ccc----ccccc---cceecCCCceEEEEee-e-----eccceEEEEEcCC
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEIL------HKL----DLRFR---SVSWCDDSLALVNETW-Y-----KTSQTRTWLVCPG 74 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~l------t~~----~~~~~---~p~wspDg~~i~f~~~-~-----~~~~~~~~~~~~~ 74 (494)
+++.|.|+++|+ .+..+..+ +.. .++-. ..+++|||+.++.... + ....++||++|+.
T Consensus 211 vs~eG~V~~id~---~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~ 287 (352)
T TIGR02658 211 PTYTGKIFQIDL---SSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAK 287 (352)
T ss_pred EecCCeEEEEec---CCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECC
Confidence 455599999997 33332222 111 11222 2678999998776442 1 1124699999998
Q ss_pred CCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEE
Q 011049 75 SKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKER 151 (494)
Q Consensus 75 ~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~ 151 (494)
++ +++..-.... .+- -+..||||+-++|..+. ..+ .+.++|..+++..+
T Consensus 288 t~----kvi~~i~vG~---~~~--~iavS~Dgkp~lyvtn~----------------~s~---~VsViD~~t~k~i~ 336 (352)
T TIGR02658 288 TG----KRLRKIELGH---EID--SINVSQDAKPLLYALST----------------GDK---TLYIFDAETGKELS 336 (352)
T ss_pred CC----eEEEEEeCCC---cee--eEEECCCCCeEEEEeCC----------------CCC---cEEEEECcCCeEEe
Confidence 76 3333222111 011 12379999966666532 012 28899998886543
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.027 Score=52.01 Aligned_cols=78 Identities=9% Similarity=0.119 Sum_probs=47.0
Q ss_pred eeeeccCCCCCCCC-CeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 19 IIYTQPAEPAEGEK-PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 19 ~i~~~~~~~~~~~~-~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
.+|+++- .+..+ .++.|..........|||||++|+-.+..+. -++|-. .+| +.|...-+.. .
T Consensus 347 tlflW~p--~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkS--VkLW~g--~tG----k~lasfRGHv------~ 410 (480)
T KOG0271|consen 347 TLFLWNP--FKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKS--VKLWDG--RTG----KFLASFRGHV------A 410 (480)
T ss_pred eEEEecc--cccccchhhhhchhhheeeEEECCCccEEEEeecccc--eeeeeC--CCc----chhhhhhhcc------c
Confidence 7888864 23332 3367777777778899999999997764332 455544 333 4444433332 2
Q ss_pred Cc--eeeCCCCCEEEEE
Q 011049 98 PM--MTRTSTGTNVIAK 112 (494)
Q Consensus 98 ~~--~~~spDG~~i~~~ 112 (494)
++ +.||.|.+-|+-.
T Consensus 411 ~VYqvawsaDsRLlVS~ 427 (480)
T KOG0271|consen 411 AVYQVAWSADSRLLVSG 427 (480)
T ss_pred eeEEEEeccCccEEEEc
Confidence 22 2399998755543
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=95.88 E-value=1.3 Score=40.25 Aligned_cols=86 Identities=15% Similarity=0.140 Sum_probs=44.0
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
.+..||+... + +..+.+..+. ....|+|++||...++.. ......+++-+.++. .....+ +.....
T Consensus 46 ~~~~L~~~~~---~-~~~~~~~~g~-~l~~PS~d~~g~~W~v~~--~~~~~~~~~~~~~g~-~~~~~v-~~~~~~----- 111 (253)
T PF10647_consen 46 GGRSLYVGPA---G-GPVRPVLTGG-SLTRPSWDPDGWVWTVDD--GSGGVRVVRDSASGT-GEPVEV-DWPGLR----- 111 (253)
T ss_pred CCCEEEEEcC---C-CcceeeccCC-ccccccccCCCCEEEEEc--CCCceEEEEecCCCc-ceeEEe-cccccC-----
Confidence 3456777665 3 4444443333 678999999976444432 221233333222322 122222 221110
Q ss_pred CCC-ceeeCCCCCEEEEEEec
Q 011049 96 GSP-MMTRTSTGTNVIAKIKK 115 (494)
Q Consensus 96 ~~~-~~~~spDG~~i~~~~~~ 115 (494)
+.. .+.+||||+++++....
T Consensus 112 ~~I~~l~vSpDG~RvA~v~~~ 132 (253)
T PF10647_consen 112 GRITALRVSPDGTRVAVVVED 132 (253)
T ss_pred CceEEEEECCCCcEEEEEEec
Confidence 011 24489999999999854
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171 | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.11 Score=54.30 Aligned_cols=49 Identities=12% Similarity=-0.004 Sum_probs=34.9
Q ss_pred ceEEEEeeeeccceEEEEEcCCCCCCCceEe-eecccccccCCCCCCceeeCCCCCEEEEEE
Q 011049 53 LALVNETWYKTSQTRTWLVCPGSKDVAPRVL-FDRVFENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 53 ~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~l-t~~~~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
..|+|.... ..+|.++|.+|. .++.+ +...... -+|. |||||++|+|..
T Consensus 319 tkiAfv~~~---~~~L~~~D~dG~--n~~~ve~~~~~~i-----~sP~--~SPDG~~vAY~t 368 (912)
T TIGR02171 319 AKLAFRNDV---TGNLAYIDYTKG--ASRAVEIEDTISV-----YHPD--ISPDGKKVAFCT 368 (912)
T ss_pred eeEEEEEcC---CCeEEEEecCCC--CceEEEecCCCce-----ecCc--CCCCCCEEEEEE
Confidence 357777642 238999999988 77777 5544333 3555 999999999943
|
This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown. |
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.32 Score=44.30 Aligned_cols=59 Identities=10% Similarity=-0.001 Sum_probs=39.5
Q ss_pred cccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEE
Q 011049 41 LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIA 111 (494)
Q Consensus 41 ~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~ 111 (494)
.....|++||||+.++|++..+. ...||+...+++ .+.+... .. ...|. |++||.-.++
T Consensus 24 ~~~~s~AvS~dg~~~A~v~~~~~-~~~L~~~~~~~~---~~~~~~g--~~----l~~PS--~d~~g~~W~v 82 (253)
T PF10647_consen 24 YDVTSPAVSPDGSRVAAVSEGDG-GRSLYVGPAGGP---VRPVLTG--GS----LTRPS--WDPDGWVWTV 82 (253)
T ss_pred ccccceEECCCCCeEEEEEEcCC-CCEEEEEcCCCc---ceeeccC--Cc----ccccc--ccCCCCEEEE
Confidence 35678999999999999984333 678999987654 3333221 11 15666 9999864333
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.41 Score=48.77 Aligned_cols=146 Identities=9% Similarity=0.074 Sum_probs=74.0
Q ss_pred CccceeeeccCCCCCCC-C-C-------eeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeee
Q 011049 15 SPRDIIYTQPAEPAEGE-K-P-------EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD 85 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~-~-~-------~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~ 85 (494)
+..+.|.++++ ..+ . . ..+..........+|+|++..++.++..++ .|.+.|+..+ +......
T Consensus 94 S~DgtIrIWDi---~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~Dg---tIrIWDl~tg--~~~~~i~ 165 (568)
T PTZ00420 94 SEDLTIRVWEI---PHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDS---FVNIWDIENE--KRAFQIN 165 (568)
T ss_pred eCCCeEEEEEC---CCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCC---eEEEEECCCC--cEEEEEe
Confidence 44567778887 321 1 1 123333344567789999988776654433 4556666655 3222111
Q ss_pred cccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEee-Ccchhhhhe
Q 011049 86 RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES-NREKYFETA 164 (494)
Q Consensus 86 ~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~-~~~~~~~~~ 164 (494)
.. . .-..+.|+|||+.++.... +. .+.++|+.+++...-... .+.. .
T Consensus 166 ~~--~-----~V~SlswspdG~lLat~s~-------------------D~--~IrIwD~Rsg~~i~tl~gH~g~~----~ 213 (568)
T PTZ00420 166 MP--K-----KLSSLKWNIKGNLLSGTCV-------------------GK--HMHIIDPRKQEIASSFHIHDGGK----N 213 (568)
T ss_pred cC--C-----cEEEEEECCCCCEEEEEec-------------------CC--EEEEEECCCCcEEEEEecccCCc----e
Confidence 11 1 1112349999997765431 11 377888888764332221 1110 0
Q ss_pred eeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 165 VALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 165 ~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
...+. ...|+++++.++.+..+...-+++.++|+..
T Consensus 214 s~~v~---~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~ 249 (568)
T PTZ00420 214 TKNIW---IDGLGGDDNYILSTGFSKNNMREMKLWDLKN 249 (568)
T ss_pred eEEEE---eeeEcCCCCEEEEEEcCCCCccEEEEEECCC
Confidence 00000 0134567766665444433335678888764
|
|
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.23 Score=43.68 Aligned_cols=48 Identities=13% Similarity=0.077 Sum_probs=31.5
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCccc
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAREN 467 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 467 (494)
..-+-+..|.+|..|| ......+-+.+.+. ++++-+ .+..|.|.-..+
T Consensus 242 ~d~l~Fyygt~DgW~p--~~~~d~~kdd~~ee--d~~Lde-dki~HAFV~~~~ 289 (301)
T KOG3975|consen 242 LDSLWFYYGTNDGWVP--SHYYDYYKDDVPEE--DLKLDE-DKIPHAFVVKHA 289 (301)
T ss_pred CcEEEEEccCCCCCcc--hHHHHHHhhhcchh--ceeecc-ccCCcceeeccc
Confidence 4678899999999987 66555555555442 244444 677898865443
|
|
| >KOG2394 consensus WD40 protein DMR-N9 [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.011 Score=56.97 Aligned_cols=99 Identities=10% Similarity=0.080 Sum_probs=56.5
Q ss_pred cccccCCCCCCCCC-ccceeeeccCCCC------------CCCCCe--------------eccccccccccceecCCCce
Q 011049 2 VEAQDRGDANVEVS-PRDIIYTQPAEPA------------EGEKPE--------------ILHKLDLRFRSVSWCDDSLA 54 (494)
Q Consensus 2 ~~~~~~~~~~~~~~-~~~~i~~~~~~~~------------~~~~~~--------------~lt~~~~~~~~p~wspDg~~ 54 (494)
++|+.+++-.|.+. ..|.+|+.+.+-. ++..-. ++..+.......+|||||+.
T Consensus 225 ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~ 304 (636)
T KOG2394|consen 225 IKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKY 304 (636)
T ss_pred EEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCce
Confidence 47888888888754 4468888865310 111111 22334445567789999999
Q ss_pred EEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEE
Q 011049 55 LVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAK 112 (494)
Q Consensus 55 i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~ 112 (494)
||-++.+. -|-+.+-++. +..-+.. . +|. +-.-+|||||||+|+.-
T Consensus 305 LA~VSqDG----fLRvF~fdt~--eLlg~mk---S-YFG--GLLCvcWSPDGKyIvtG 350 (636)
T KOG2394|consen 305 LATVSQDG----FLRIFDFDTQ--ELLGVMK---S-YFG--GLLCVCWSPDGKYIVTG 350 (636)
T ss_pred EEEEecCc----eEEEeeccHH--HHHHHHH---h-hcc--ceEEEEEcCCccEEEec
Confidence 99887543 2334443432 2221111 1 111 33357899999988764
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.57 Score=47.16 Aligned_cols=144 Identities=13% Similarity=-0.010 Sum_probs=71.9
Q ss_pred CccceeeeccCCCCCCCC--------CeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeec
Q 011049 15 SPRDIIYTQPAEPAEGEK--------PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR 86 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~--------~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~ 86 (494)
+..+.|.++++ ..+. ...|..........+|+|++..++.++..+ ..|.+-|+..+ +.......
T Consensus 95 S~DgtIkIWdi---~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~D---gtVrIWDl~tg--~~~~~l~~ 166 (493)
T PTZ00421 95 SEDGTIMGWGI---PEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGAD---MVVNVWDVERG--KAVEVIKC 166 (493)
T ss_pred eCCCEEEEEec---CCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCC---CEEEEEECCCC--eEEEEEcC
Confidence 44567777777 3221 122333334445678999976555554333 34666676655 33322221
Q ss_pred ccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheee
Q 011049 87 VFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVA 166 (494)
Q Consensus 87 ~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~ 166 (494)
... .-..+.|+|||+.++.... +. .|.++|+.+++.......... .
T Consensus 167 h~~------~V~sla~spdG~lLatgs~------------------Dg---~IrIwD~rsg~~v~tl~~H~~-----~-- 212 (493)
T PTZ00421 167 HSD------QITSLEWNLDGSLLCTTSK------------------DK---KLNIIDPRDGTIVSSVEAHAS-----A-- 212 (493)
T ss_pred CCC------ceEEEEEECCCCEEEEecC------------------CC---EEEEEECCCCcEEEEEecCCC-----C--
Confidence 111 1112449999987765431 11 377888887764322211110 0
Q ss_pred eccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 167 LVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 167 ~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
......|.+++..++....+...-.++.++|+..
T Consensus 213 ---~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~ 246 (493)
T PTZ00421 213 ---KSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRK 246 (493)
T ss_pred ---cceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCC
Confidence 0001245566665554433333345677777654
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.06 Score=48.26 Aligned_cols=83 Identities=14% Similarity=0.118 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC----C-----CceeEEEeCCCCCCCCCCCCCccccccc
Q 011049 324 LVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA----P-----HLFCCGIARSGSYNKTLTPFGFQTEFRT 394 (494)
Q Consensus 324 ~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~----p-----~~~~a~v~~~~~~~~~~~~~~~~~~~~~ 394 (494)
...++...++.|.+.. ...+|.|++||||+.+.+.++..- + .+|..++..+|-.+.
T Consensus 75 s~~~l~~~L~~L~~~~--~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~------------- 139 (233)
T PF05990_consen 75 SGPALARFLRDLARAP--GIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN------------- 139 (233)
T ss_pred HHHHHHHHHHHHHhcc--CCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH-------------
Confidence 3555666666666652 248999999999999998886542 1 256667777664331
Q ss_pred ccccHHHHHhcCccccccCCCCCEEEEecCCCCC
Q 011049 395 LWEATNVYIEMSPITHANKIKKPILIIHGEVDDK 428 (494)
Q Consensus 395 ~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~ 428 (494)
+.+...- ..+.+...++.+.+..+|..
T Consensus 140 -----d~f~~~~--~~~~~~~~~itvy~s~~D~A 166 (233)
T PF05990_consen 140 -----DVFRSQL--PDLGSSARRITVYYSRNDRA 166 (233)
T ss_pred -----HHHHHHH--HHHhhcCCCEEEEEcCCchH
Confidence 1111100 02333447889999999975
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=95.53 E-value=1 Score=42.87 Aligned_cols=65 Identities=8% Similarity=-0.080 Sum_probs=31.6
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccc-ccccCCCCCC-ceeeCCCCCEEEEE
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVF-ENVYSDPGSP-MMTRTSTGTNVIAK 112 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~-~~~~~~~~~~-~~~~spDG~~i~~~ 112 (494)
..+|+|||+.++..... .+.|.+++++.+..+.+.+..-.. ......+..+ -+.++|||++++..
T Consensus 179 ~~~~~pdg~~lyv~~~~---~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~ 245 (330)
T PRK11028 179 HMVFHPNQQYAYCVNEL---NSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYAC 245 (330)
T ss_pred eEEECCCCCEEEEEecC---CCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEe
Confidence 46899999986654322 345666666522113232221110 0101111111 13479999977664
|
|
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.088 Score=48.94 Aligned_cols=118 Identities=16% Similarity=0.170 Sum_probs=69.1
Q ss_pred CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhC---C------eEEEeC
Q 011049 233 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR---R------FAVLAG 303 (494)
Q Consensus 233 dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---G------~~v~~~ 303 (494)
.|.+|+..-..|+..+ .++..+|+++ +||.|.+- ..|- .+...|..- | |-|++|
T Consensus 132 eGL~iHFlhvk~p~~k-~~k~v~PlLl-~HGwPGsv-----------~EFy----kfIPlLT~p~~hg~~~d~~FEVI~P 194 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKK-KKKKVKPLLL-LHGWPGSV-----------REFY----KFIPLLTDPKRHGNESDYAFEVIAP 194 (469)
T ss_pred cceeEEEEEecCCccc-cCCcccceEE-ecCCCchH-----------HHHH----hhhhhhcCccccCCccceeEEEecc
Confidence 6888998888887653 3334456554 89987221 1111 122233332 3 677773
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHH-HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEe
Q 011049 304 PSIPIIGEGDKLPNDRFVEQLVSSAEAAVE-EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIA 374 (494)
Q Consensus 304 ~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~-~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~ 374 (494)
. ..|+|-+.....-+-. ...+...+. -+.+.|+ ++..|-|.-+|..++..++..+|+.+.+.-+
T Consensus 195 S---lPGygwSd~~sk~GFn-~~a~ArvmrkLMlRLg~---nkffiqGgDwGSiI~snlasLyPenV~GlHl 259 (469)
T KOG2565|consen 195 S---LPGYGWSDAPSKTGFN-AAATARVMRKLMLRLGY---NKFFIQGGDWGSIIGSNLASLYPENVLGLHL 259 (469)
T ss_pred C---CCCcccCcCCccCCcc-HHHHHHHHHHHHHHhCc---ceeEeecCchHHHHHHHHHhhcchhhhHhhh
Confidence 3 3456555433211111 111223333 3455665 8899999999999999999999998765543
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.036 Score=49.99 Aligned_cols=53 Identities=13% Similarity=0.069 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC---CCceeEEEeCCC
Q 011049 320 FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---PHLFCCGIARSG 377 (494)
Q Consensus 320 ~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~---p~~~~a~v~~~~ 377 (494)
..+++++...++|..+.-+ ....+.|||+||.++.-+|.+- .+-++..+.+..
T Consensus 46 ~l~~~a~~yv~~Ir~~QP~-----GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~ 101 (257)
T COG3319 46 SLDDMAAAYVAAIRRVQPE-----GPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDA 101 (257)
T ss_pred CHHHHHHHHHHHHHHhCCC-----CCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEecc
Confidence 3455565555555443222 4699999999999999888753 233444444433
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.36 Score=50.35 Aligned_cols=81 Identities=11% Similarity=0.124 Sum_probs=52.2
Q ss_pred CCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
-.++..+|+.+. . . .+..........+.|||||+.++|.+.......++|+++.+ + .++......
T Consensus 39 ~~~~~~~~~~d~---~--~-~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~l~l~~~~-g-----~~~~~~~~v--- 103 (620)
T COG1506 39 PLYKSSLWVSDG---K--T-VRLLTFGGGVSELRWSPDGSVLAFVSTDGGRVAQLYLVDVG-G-----LITKTAFGV--- 103 (620)
T ss_pred cccccceEEEec---c--c-ccccccCCcccccccCCCCCEEEEEeccCCCcceEEEEecC-C-----ceeeeeccc---
Confidence 345566777554 2 2 33444445678899999999999998544446899999987 3 122221111
Q ss_pred CCCCCceeeCCCCCEEEEEE
Q 011049 94 DPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~ 113 (494)
.... |+|+|..+++..
T Consensus 104 --~~~~--~~~~g~~~~~~~ 119 (620)
T COG1506 104 --SDAR--WSPDGDRIAFLT 119 (620)
T ss_pred --ccce--eCCCCCeEEEEe
Confidence 2223 999999999943
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.019 Score=51.04 Aligned_cols=22 Identities=27% Similarity=0.398 Sum_probs=18.7
Q ss_pred CCcEEEEecChHHHHHHHHHHh
Q 011049 343 PSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 343 ~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
..+|.++|||+||.++-.++..
T Consensus 77 ~~~IsfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 77 IRKISFIGHSLGGLIARYALGL 98 (217)
T ss_pred cccceEEEecccHHHHHHHHHH
Confidence 3689999999999999877663
|
|
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.03 Score=49.65 Aligned_cols=49 Identities=20% Similarity=0.206 Sum_probs=33.8
Q ss_pred HHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCC----CceeEEEeCCCC
Q 011049 330 AAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP----HLFCCGIARSGS 378 (494)
Q Consensus 330 ~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p----~~~~a~v~~~~~ 378 (494)
.|++|+.+...-.+..|.+.|||.||.+|.++++..+ +++..++++.|.
T Consensus 70 ~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 70 SALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 4444444431112356999999999999999998843 477888877663
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=95.17 E-value=1.9 Score=41.04 Aligned_cols=85 Identities=12% Similarity=0.057 Sum_probs=43.7
Q ss_pred ccceeeeccCCCCCCCCCeecc--ccccccccceecCCCceEEEEeeeeccceEEEEEcCC-CCCCCceEeeeccccccc
Q 011049 16 PRDIIYTQPAEPAEGEKPEILH--KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPG-SKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt--~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~-~g~~~~~~lt~~~~~~~~ 92 (494)
+.+.|.++++. .+++.+.+. .........++||||+.|+..... ...|.+.+++ .+ ..+.+......
T Consensus 10 ~~~~I~~~~~~--~~g~l~~~~~~~~~~~~~~l~~spd~~~lyv~~~~---~~~i~~~~~~~~g--~l~~~~~~~~~--- 79 (330)
T PRK11028 10 ESQQIHVWNLN--HEGALTLLQVVDVPGQVQPMVISPDKRHLYVGVRP---EFRVLSYRIADDG--ALTFAAESPLP--- 79 (330)
T ss_pred CCCCEEEEEEC--CCCceeeeeEEecCCCCccEEECCCCCEEEEEECC---CCcEEEEEECCCC--ceEEeeeecCC---
Confidence 34677888872 124433222 122233456899999987655432 3455555544 33 32222221111
Q ss_pred CCCCCC-ceeeCCCCCEEEEEE
Q 011049 93 SDPGSP-MMTRTSTGTNVIAKI 113 (494)
Q Consensus 93 ~~~~~~-~~~~spDG~~i~~~~ 113 (494)
+.| -+.++|||++++...
T Consensus 80 ---~~p~~i~~~~~g~~l~v~~ 98 (330)
T PRK11028 80 ---GSPTHISTDHQGRFLFSAS 98 (330)
T ss_pred ---CCceEEEECCCCCEEEEEE
Confidence 233 234899999776654
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.47 Score=44.25 Aligned_cols=116 Identities=10% Similarity=-0.002 Sum_probs=61.7
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEee---ee---ccceEEEEEcCCCCCCCceEeeecccc-c
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETW---YK---TSQTRTWLVCPGSKDVAPRVLFDRVFE-N 90 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~---~~---~~~~~~~~~~~~~g~~~~~~lt~~~~~-~ 90 (494)
+++|++|. +.++..=.... +....+..||||+.|+..+. |. .|..-|-+.|..+= +++.-..-+.. -
T Consensus 17 ~rv~viD~---d~~k~lGmi~~-g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL--~~~~EI~iP~k~R 90 (342)
T PF06433_consen 17 SRVYVIDA---DSGKLLGMIDT-GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTL--SPTGEIEIPPKPR 90 (342)
T ss_dssp EEEEEEET---TTTEEEEEEEE-ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTT--EEEEEEEETTS-B
T ss_pred ceEEEEEC---CCCcEEEEeec-ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcC--cccceEecCCcch
Confidence 58999998 65543322233 34566789999999886553 22 22333444455532 22221111211 0
Q ss_pred ccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcc
Q 011049 91 VYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNRE 158 (494)
Q Consensus 91 ~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~ 158 (494)
....+...+...|.|||++++.-. +|.. .+-++|++.++...-...+|+
T Consensus 91 ~~~~~~~~~~~ls~dgk~~~V~N~----------------TPa~---SVtVVDl~~~kvv~ei~~PGC 139 (342)
T PF06433_consen 91 AQVVPYKNMFALSADGKFLYVQNF----------------TPAT---SVTVVDLAAKKVVGEIDTPGC 139 (342)
T ss_dssp --BS--GGGEEE-TTSSEEEEEEE----------------SSSE---EEEEEETTTTEEEEEEEGTSE
T ss_pred heecccccceEEccCCcEEEEEcc----------------CCCC---eEEEEECCCCceeeeecCCCE
Confidence 011112223457999999877642 3322 388999999877665555555
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.091 Score=35.84 Aligned_cols=45 Identities=16% Similarity=0.079 Sum_probs=26.7
Q ss_pred cccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCC
Q 011049 220 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPE 264 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg 264 (494)
..++.|...+++.||.-+...-+.++........+.|+|++.||-
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL 52 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGL 52 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--T
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCc
Confidence 356789999999999999888887665222334458999999994
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=95.08 E-value=1.4 Score=48.04 Aligned_cols=43 Identities=21% Similarity=0.216 Sum_probs=31.4
Q ss_pred CCccceeeec----cCCCCCCCCCeeccccccccccceecCCCceEEEEe
Q 011049 14 VSPRDIIYTQ----PAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNET 59 (494)
Q Consensus 14 ~~~~~~i~~~----~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~ 59 (494)
+...|+|.++ +. +.........-+......+||||+..|++++
T Consensus 93 ~~~~Gdi~~~~~~~~~---~~~~~E~VG~vd~GI~a~~WSPD~Ella~vT 139 (928)
T PF04762_consen 93 ALASGDIILVREDPDP---DEDEIEIVGSVDSGILAASWSPDEELLALVT 139 (928)
T ss_pred EECCceEEEEEccCCC---CCceeEEEEEEcCcEEEEEECCCcCEEEEEe
Confidence 4456777777 44 4455556666666677789999999999987
|
|
| >KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.32 Score=51.19 Aligned_cols=29 Identities=14% Similarity=0.160 Sum_probs=20.6
Q ss_pred ccccceecCCCceEEEEeeeeccceEEEEEc
Q 011049 42 RFRSVSWCDDSLALVNETWYKTSQTRTWLVC 72 (494)
Q Consensus 42 ~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~ 72 (494)
...-.+|||||+.||+.++.. --.||-..
T Consensus 71 sv~CVR~S~dG~~lAsGSDD~--~v~iW~~~ 99 (942)
T KOG0973|consen 71 SVNCVRFSPDGSYLASGSDDR--LVMIWERA 99 (942)
T ss_pred ceeEEEECCCCCeEeeccCcc--eEEEeeec
Confidence 344567999999999877532 35667776
|
|
| >KOG2048 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.96 E-value=1.1 Score=44.86 Aligned_cols=135 Identities=13% Similarity=0.053 Sum_probs=67.4
Q ss_pred cccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEecc
Q 011049 37 HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKE 116 (494)
Q Consensus 37 t~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~ 116 (494)
|+.+..++.-+.||||++|++.+-. ...||.+..+.- ...+.+-+-+... . ..-.+.++-|+.++++.+.
T Consensus 379 ~k~~~nIs~~aiSPdg~~Ia~st~~---~~~iy~L~~~~~-vk~~~v~~~~~~~--~--~a~~i~ftid~~k~~~~s~-- 448 (691)
T KOG2048|consen 379 TKEKENISCAAISPDGNLIAISTVS---RTKIYRLQPDPN-VKVINVDDVPLAL--L--DASAISFTIDKNKLFLVSK-- 448 (691)
T ss_pred cCCccceeeeccCCCCCEEEEeecc---ceEEEEeccCcc-eeEEEeccchhhh--c--cceeeEEEecCceEEEEec--
Confidence 3444445566799999999997643 347888877652 1111111111000 0 1111225566665555541
Q ss_pred CccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeE
Q 011049 117 NDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQY 196 (494)
Q Consensus 117 ~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l 196 (494)
. ...+..+++++...+.+-...... -...+ .....|+||+++++.. .-..|
T Consensus 449 ----------------~--~~~le~~el~~ps~kel~~~~~~~-~~~~I------~~l~~SsdG~yiaa~~----t~g~I 499 (691)
T KOG2048|consen 449 ----------------N--IFSLEEFELETPSFKELKSIQSQA-KCPSI------SRLVVSSDGNYIAAIS----TRGQI 499 (691)
T ss_pred ----------------c--cceeEEEEecCcchhhhhcccccc-CCCcc------eeEEEcCCCCEEEEEe----ccceE
Confidence 0 012455555543322211110000 00000 1135678998887754 24679
Q ss_pred EEEEcCCCceeEee
Q 011049 197 HILSWPLKKSSQIT 210 (494)
Q Consensus 197 ~~~~~~~~~~~~lt 210 (494)
+++++++.+.+.+.
T Consensus 500 ~v~nl~~~~~~~l~ 513 (691)
T KOG2048|consen 500 FVYNLETLESHLLK 513 (691)
T ss_pred EEEEcccceeecch
Confidence 99999888776665
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.3 Score=48.20 Aligned_cols=61 Identities=13% Similarity=0.063 Sum_probs=45.8
Q ss_pred CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC--------------------Cc-EEEEEcCCCCCccCCcccHHHHHHH
Q 011049 416 KPILIIHGEVDDKVGLFPMQAERFFDALKGHG--------------------AL-SRLVLLPFEHHVYAARENVMHVIWE 474 (494)
Q Consensus 416 ~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g--------------------~~-~~~~~~~~~~H~~~~~~~~~~~~~~ 474 (494)
.++||..|..|.+|+ ...++++.+.|+=.+ .. ..+.++.++||... ..++..+..
T Consensus 352 irVLiY~GD~D~icn--~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp--~qP~~al~m 427 (437)
T PLN02209 352 YRSLIFSGDHDITMP--FQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE--YLPEESSIM 427 (437)
T ss_pred ceEEEEECCccccCC--cHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC--cCHHHHHHH
Confidence 689999999999987 888889999886211 12 66777889999773 466677766
Q ss_pred HHHHHH
Q 011049 475 TDRWLQ 480 (494)
Q Consensus 475 ~~~fl~ 480 (494)
+.+|+.
T Consensus 428 ~~~fi~ 433 (437)
T PLN02209 428 FQRWIS 433 (437)
T ss_pred HHHHHc
Confidence 677764
|
|
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.19 Score=47.42 Aligned_cols=171 Identities=16% Similarity=0.144 Sum_probs=92.4
Q ss_pred cCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHH
Q 011049 282 FSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL 361 (494)
Q Consensus 282 ~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~ 361 (494)
|...-......|.++|+-|+-+|..-+ +......++...|+.+.+++-.++- ...++.++|.|+|+-+--.+
T Consensus 272 Wr~lDk~v~~~l~~~gvpVvGvdsLRY------fW~~rtPe~~a~Dl~r~i~~y~~~w--~~~~~~liGySfGADvlP~~ 343 (456)
T COG3946 272 WRDLDKEVAEALQKQGVPVVGVDSLRY------FWSERTPEQIAADLSRLIRFYARRW--GAKRVLLIGYSFGADVLPFA 343 (456)
T ss_pred hhhhhHHHHHHHHHCCCceeeeehhhh------hhccCCHHHHHHHHHHHHHHHHHhh--CcceEEEEeecccchhhHHH
Confidence 544444556688899999997555322 1223345777899999998877753 35899999999999877766
Q ss_pred HHhCCCceeEEEeCCCCCCCC-CCCCCcccccccccccHHHHHhcCccccccCCC-CCEEEEecCC--CCCCCCCHHHHH
Q 011049 362 LAHAPHLFCCGIARSGSYNKT-LTPFGFQTEFRTLWEATNVYIEMSPITHANKIK-KPILIIHGEV--DDKVGLFPMQAE 437 (494)
Q Consensus 362 ~~~~p~~~~a~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~-~P~li~~G~~--D~~v~~~~~~~~ 437 (494)
-.+-|...+..|....+.... ...+.+.-+ -|-....-....+...+.++. .-+.-|.|.+ |..||
T Consensus 344 ~n~L~~~~r~~v~~~~ll~l~~~~~fe~~v~---gWlg~~~~g~~~~~~~~~~l~~~~v~CiYG~~e~d~~Cp------- 413 (456)
T COG3946 344 YNRLPPATRQRVRMVSLLGLGRTADFEISVE---GWLGMAGEGAGDVVPDIAKLPLARVQCIYGQEEKDTACP------- 413 (456)
T ss_pred HHhCCHHHHHHHHHHHHHhccccceEEEEEe---eeeccCCcCCCCcchhhhhCCcceeEEEecCccccccCC-------
Confidence 666554333322222111100 001111100 111000000123344445554 4466677765 45544
Q ss_pred HHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 438 RFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 438 ~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
.|+.+| ++.+..|| ||.|. ++.+.....|++=+
T Consensus 414 ----~l~~~~--~~~v~lpG-gHHFd--~dy~~la~~il~~~ 446 (456)
T COG3946 414 ----SLKAKG--VDTVKLPG-GHHFD--GDYEKLAKAILQGM 446 (456)
T ss_pred ----cchhhc--ceeEecCC-CcccC--ccHHHHHHHHHHHH
Confidence 233334 46778888 56564 44555555565544
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.098 Score=43.52 Aligned_cols=51 Identities=12% Similarity=0.038 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC----ceeEEEeCCC
Q 011049 325 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH----LFCCGIARSG 377 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~----~~~a~v~~~~ 377 (494)
...+...++....+ ....+|.++|||+||.+|..++..... ....++++.+
T Consensus 11 ~~~i~~~~~~~~~~--~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~ 65 (153)
T cd00741 11 ANLVLPLLKSALAQ--YPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGP 65 (153)
T ss_pred HHHHHHHHHHHHHH--CCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCC
Confidence 44444455444433 135789999999999999988877643 3344555544
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.13 Score=59.17 Aligned_cols=75 Identities=9% Similarity=0.020 Sum_probs=47.5
Q ss_pred hCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh---CCCceeE
Q 011049 295 ARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH---APHLFCC 371 (494)
Q Consensus 295 ~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~---~p~~~~a 371 (494)
..++.|+.++. .|.+.........+..++++.+.++.+ . ...+..++|||+||.++..++.+ .++++..
T Consensus 1092 ~~~~~v~~~~~---~g~~~~~~~~~~l~~la~~~~~~i~~~---~--~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~ 1163 (1296)
T PRK10252 1092 DPQWSIYGIQS---PRPDGPMQTATSLDEVCEAHLATLLEQ---Q--PHGPYHLLGYSLGGTLAQGIAARLRARGEEVAF 1163 (1296)
T ss_pred CCCCcEEEEEC---CCCCCCCCCCCCHHHHHHHHHHHHHhh---C--CCCCEEEEEechhhHHHHHHHHHHHHcCCceeE
Confidence 45688877443 344333222334556666665555432 1 12479999999999999999885 4677777
Q ss_pred EEeCCC
Q 011049 372 GIARSG 377 (494)
Q Consensus 372 ~v~~~~ 377 (494)
++...+
T Consensus 1164 l~l~~~ 1169 (1296)
T PRK10252 1164 LGLLDT 1169 (1296)
T ss_pred EEEecC
Confidence 776654
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=94.85 E-value=2.9 Score=37.78 Aligned_cols=186 Identities=17% Similarity=0.207 Sum_probs=99.4
Q ss_pred CCCCeeccccccccccceecCCCc-eEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCE
Q 011049 30 GEKPEILHKLDLRFRSVSWCDDSL-ALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTN 108 (494)
Q Consensus 30 ~~~~~~lt~~~~~~~~p~wspDg~-~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~ 108 (494)
.|+..--+..+.+....+++|-.+ .++|.+ +- +...++.|.++. .++..+....+..+| +.-+ +||||+.
T Consensus 57 aGk~v~~~~lpaR~Hgi~~~p~~~ravafAR-rP--Gtf~~vfD~~~~-~~pv~~~s~~~RHfy---GHGv--fs~dG~~ 127 (366)
T COG3490 57 AGKIVFATALPARGHGIAFHPALPRAVAFAR-RP--GTFAMVFDPNGA-QEPVTLVSQEGRHFY---GHGV--FSPDGRL 127 (366)
T ss_pred CCceeeeeecccccCCeecCCCCcceEEEEe-cC--CceEEEECCCCC-cCcEEEecccCceee---cccc--cCCCCcE
Confidence 356665666677788889999754 555543 32 467888998876 366677666666555 4445 8999997
Q ss_pred EEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEE--EeeCcchhhhheeeeccCCCcccccccCcEEEEE
Q 011049 109 VIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI--WESNREKYFETAVALVFGQGEEDINLNQLKILTS 186 (494)
Q Consensus 109 i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l--~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~ 186 (494)
++-+.+..+ ..+--|-++|...+ .+++ |..-|. .-.+..+.+||+.+++.
T Consensus 128 LYATEndfd----------------~~rGViGvYd~r~~-fqrvgE~~t~Gi-----------GpHev~lm~DGrtlvva 179 (366)
T COG3490 128 LYATENDFD----------------PNRGVIGVYDAREG-FQRVGEFSTHGI-----------GPHEVTLMADGRTLVVA 179 (366)
T ss_pred EEeecCCCC----------------CCCceEEEEecccc-cceecccccCCc-----------CcceeEEecCCcEEEEe
Confidence 766543211 11222555555432 2222 111110 00234666777776664
Q ss_pred EecC-CC-------------CCeEEEEEcCCCceeEeecCCCCCCcccccccEEEEEEcCCCceEEEEEEeCCCCCCCCC
Q 011049 187 KESK-TE-------------ITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKD 252 (494)
Q Consensus 187 ~~s~-~~-------------p~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~ 252 (494)
..+- +. -|.+.+++..+++...-..++ +.+.....+.+.+- .||+.+.+.-|.-+. .+
T Consensus 180 nGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp---~~l~~lSiRHld~g-~dgtvwfgcQy~G~~----~d 251 (366)
T COG3490 180 NGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLP---ASLRQLSIRHLDIG-RDGTVWFGCQYRGPR----ND 251 (366)
T ss_pred CCceecccccCccccchhhcCccEEEEeccccchhhhccCc---hhhhhcceeeeeeC-CCCcEEEEEEeeCCC----cc
Confidence 3211 11 245666664444432111111 12233345555544 789888888886432 12
Q ss_pred CCCcEEEEec
Q 011049 253 GPLPCLFWAY 262 (494)
Q Consensus 253 ~~~P~vv~~h 262 (494)
+|.+|-.|
T Consensus 252 --~ppLvg~~ 259 (366)
T COG3490 252 --LPPLVGHF 259 (366)
T ss_pred --CCcceeec
Confidence 66666555
|
|
| >KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.23 Score=45.21 Aligned_cols=16 Identities=6% Similarity=0.308 Sum_probs=12.8
Q ss_pred ceeeCCCCCEEEEEEe
Q 011049 99 MMTRTSTGTNVIAKIK 114 (494)
Q Consensus 99 ~~~~spDG~~i~~~~~ 114 (494)
..+|||||+.|+-++.
T Consensus 96 ~~~WSPdgrhiL~tse 111 (447)
T KOG4497|consen 96 SISWSPDGRHILLTSE 111 (447)
T ss_pred eeeECCCcceEeeeec
Confidence 4569999999988763
|
|
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=94.84 E-value=1 Score=40.30 Aligned_cols=170 Identities=8% Similarity=-0.008 Sum_probs=86.5
Q ss_pred eeeeccCCCC--CCCCCe-eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 19 IIYTQPAEPA--EGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 19 ~i~~~~~~~~--~~~~~~-~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
.|+++++... +-|.+. +++.........+-|+||++ +++...++ .+.+-|+.+| +.++.+.....+.
T Consensus 39 ~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~-alS~swD~---~lrlWDl~~g--~~t~~f~GH~~dV---- 108 (315)
T KOG0279|consen 39 TIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNF-ALSASWDG---TLRLWDLATG--ESTRRFVGHTKDV---- 108 (315)
T ss_pred EEEEEEeccCccccCceeeeeeccceEecceEEccCCce-EEeccccc---eEEEEEecCC--cEEEEEEecCCce----
Confidence 5667776432 234444 45555777788999999986 44443333 4555566776 7788877766542
Q ss_pred CCCceeeCCCCCEEEEEEeccC-----c-cceEEEEccCC---------CCCCCCCCceEeeecCCCceEEEEeeCcchh
Q 011049 96 GSPMMTRTSTGTNVIAKIKKEN-----D-EQIYILLNGRG---------FTPEGNIPFLDLFDINTGSKERIWESNREKY 160 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~~~~~-----~-~~~~~~~~~~g---------~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~ 160 (494)
.-+.+|||.++|+--+.... . .+-.+.+..++ +.|.... .+++...-.+..++|...+...
T Consensus 109 --lsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~--p~Ivs~s~DktvKvWnl~~~~l 184 (315)
T KOG0279|consen 109 --LSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESN--PIIVSASWDKTVKVWNLRNCQL 184 (315)
T ss_pred --EEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCC--cEEEEccCCceEEEEccCCcch
Confidence 11226888887765442110 0 00111111111 1222211 2333333344567777655411
Q ss_pred hhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCce
Q 011049 161 FETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKS 206 (494)
Q Consensus 161 ~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~ 206 (494)
-..+..-...-+...+||||...+ +...-.++++++++.++.
T Consensus 185 ~~~~~gh~~~v~t~~vSpDGslca----sGgkdg~~~LwdL~~~k~ 226 (315)
T KOG0279|consen 185 RTTFIGHSGYVNTVTVSPDGSLCA----SGGKDGEAMLWDLNEGKN 226 (315)
T ss_pred hhccccccccEEEEEECCCCCEEe----cCCCCceEEEEEccCCce
Confidence 101110000112358899997543 234456788888776553
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=94.82 E-value=1.9 Score=44.15 Aligned_cols=55 Identities=13% Similarity=0.168 Sum_probs=34.6
Q ss_pred CccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
+..+.|-++|+ ..++..............+|+|||+.|+..+ . ...|.+.|+.++
T Consensus 145 S~DgtIrIWDl---~tg~~~~~i~~~~~V~SlswspdG~lLat~s-~---D~~IrIwD~Rsg 199 (568)
T PTZ00420 145 GFDSFVNIWDI---ENEKRAFQINMPKKLSSLKWNIKGNLLSGTC-V---GKHMHIIDPRKQ 199 (568)
T ss_pred eCCCeEEEEEC---CCCcEEEEEecCCcEEEEEECCCCCEEEEEe-c---CCEEEEEECCCC
Confidence 44567888888 5454322112233456788999999876543 2 346777788765
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.13 Score=45.47 Aligned_cols=68 Identities=16% Similarity=0.144 Sum_probs=39.1
Q ss_pred cccccCCCCC-----EEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 408 ITHANKIKKP-----ILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 408 ~~~~~~~~~P-----~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
..++.+..+| +.++....|..+| ......+.+... |..++++ + .||.-...-....+.++|.+-|++.
T Consensus 294 ~T~v~~fp~Pvdpsl~ivv~A~~D~Yip--r~gv~~lQ~~WP--g~eVr~~--e-gGHVsayl~k~dlfRR~I~d~L~R~ 366 (371)
T KOG1551|consen 294 CTHVANFPVPVDPSLIIVVQAKEDAYIP--RTGVRSLQEIWP--GCEVRYL--E-GGHVSAYLFKQDLFRRAIVDGLDRL 366 (371)
T ss_pred hchhhcCCCCCCCCeEEEEEecCCcccc--ccCcHHHHHhCC--CCEEEEe--e-cCceeeeehhchHHHHHHHHHHHhh
Confidence 4455555544 5677889999987 543333333332 4444444 4 4886443333445666777777664
|
|
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.79 E-value=1.2 Score=44.69 Aligned_cols=123 Identities=12% Similarity=0.128 Sum_probs=69.0
Q ss_pred ccccccccccceecCCCceEEEEeeeeccceEEEEEcC-CCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEe
Q 011049 36 LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP-GSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 114 (494)
Q Consensus 36 lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~-~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~ 114 (494)
+..........+|||||+.|+=.+. ...|++.++ +.+ +.+....+...+ -..++++|+|+.|+....
T Consensus 199 l~~h~~~v~~~~fs~d~~~l~s~s~----D~tiriwd~~~~~----~~~~~l~gH~~~----v~~~~f~p~g~~i~Sgs~ 266 (456)
T KOG0266|consen 199 LSGHTRGVSDVAFSPDGSYLLSGSD----DKTLRIWDLKDDG----RNLKTLKGHSTY----VTSVAFSPDGNLLVSGSD 266 (456)
T ss_pred ccccccceeeeEECCCCcEEEEecC----CceEEEeeccCCC----eEEEEecCCCCc----eEEEEecCCCCEEEEecC
Confidence 3344455667899999996664432 334555555 332 233222222211 123458999954444321
Q ss_pred ccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCC
Q 011049 115 KENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEIT 194 (494)
Q Consensus 115 ~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~ 194 (494)
+.. +.++|+.+++..+....... ......|++|+..++.. +. -.
T Consensus 267 ------------------D~t---vriWd~~~~~~~~~l~~hs~-----------~is~~~f~~d~~~l~s~--s~--d~ 310 (456)
T KOG0266|consen 267 ------------------DGT---VRIWDVRTGECVRKLKGHSD-----------GISGLAFSPDGNLLVSA--SY--DG 310 (456)
T ss_pred ------------------CCc---EEEEeccCCeEEEeeeccCC-----------ceEEEEECCCCCEEEEc--CC--Cc
Confidence 222 88899999887776654322 01123788888776543 22 34
Q ss_pred eEEEEEcCCCce
Q 011049 195 QYHILSWPLKKS 206 (494)
Q Consensus 195 ~l~~~~~~~~~~ 206 (494)
.+.++|..++..
T Consensus 311 ~i~vwd~~~~~~ 322 (456)
T KOG0266|consen 311 TIRVWDLETGSK 322 (456)
T ss_pred cEEEEECCCCce
Confidence 577788777663
|
|
| >KOG1407 consensus WD40 repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.77 E-value=1.3 Score=39.24 Aligned_cols=39 Identities=10% Similarity=0.025 Sum_probs=29.9
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEe
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNET 59 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~ 59 (494)
..|=++|+ -.+++..-+...+.+-...|||||+++++..
T Consensus 87 k~ir~wd~---r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~ 125 (313)
T KOG1407|consen 87 KTIRIWDI---RSGKCTARIETKGENINITWSPDGEYIAVGN 125 (313)
T ss_pred ceEEEEEe---ccCcEEEEeeccCcceEEEEcCCCCEEEEec
Confidence 35556666 5677777777777777889999999999875
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=94.72 E-value=2.4 Score=39.13 Aligned_cols=121 Identities=12% Similarity=0.058 Sum_probs=67.9
Q ss_pred cceeeeccCCCCCCCC-Ceeccccccc--cccceecCCCceEEEEee-eeccceEEEEEcCCCCCCCceEeeeccccccc
Q 011049 17 RDIIYTQPAEPAEGEK-PEILHKLDLR--FRSVSWCDDSLALVNETW-YKTSQTRTWLVCPGSKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~-~~~lt~~~~~--~~~p~wspDg~~i~f~~~-~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~ 92 (494)
..-++++|. .+++ +.+++..+.+ +..-+|||||++|+-+.+ +......|=+.|+.. ..+++-+.+...
T Consensus 27 G~~~~v~D~---~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~---~~~ri~E~~s~G-- 98 (305)
T PF07433_consen 27 GTFALVFDC---RTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAAR---GYRRIGEFPSHG-- 98 (305)
T ss_pred CcEEEEEEc---CCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcC---CcEEEeEecCCC--
Confidence 335566666 4454 4456555543 346789999998665543 332356787888773 345555544322
Q ss_pred CCCCCCceeeCCCCCEEEEEEeccC---cc-ceEEEEccCCCCCCCCCCceEeeecCCCceEEEEe
Q 011049 93 SDPGSPMMTRTSTGTNVIAKIKKEN---DE-QIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE 154 (494)
Q Consensus 93 ~~~~~~~~~~spDG~~i~~~~~~~~---~~-~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~ 154 (494)
.+|=+.. +.|||+.|++....-. .. ..++ +.+...+.|..+|..+|+....|.
T Consensus 99 IGPHel~--l~pDG~tLvVANGGI~Thpd~GR~kL-------Nl~tM~psL~~ld~~sG~ll~q~~ 155 (305)
T PF07433_consen 99 IGPHELL--LMPDGETLVVANGGIETHPDSGRAKL-------NLDTMQPSLVYLDARSGALLEQVE 155 (305)
T ss_pred cChhhEE--EcCCCCEEEEEcCCCccCcccCceec-------ChhhcCCceEEEecCCCceeeeee
Confidence 2332223 8999988887542111 01 1111 112224568889988988655444
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.083 Score=43.12 Aligned_cols=39 Identities=26% Similarity=0.319 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 324 LVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 324 ~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
....+...++.+.++.. +.+|.+.|||.||.+|..++..
T Consensus 46 ~~~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 46 LYDQILDALKELVEKYP--DYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHh
Confidence 34455566666665543 4789999999999999888765
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >PF03283 PAE: Pectinacetylesterase | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.053 Score=51.88 Aligned_cols=36 Identities=14% Similarity=0.297 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHH
Q 011049 327 SAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLL 362 (494)
Q Consensus 327 d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~ 362 (494)
-+.+++++|.+++.-++++|.|.|.|+||+.++.-+
T Consensus 139 i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 139 ILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 356788999998888899999999999999987654
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.57 Score=45.31 Aligned_cols=109 Identities=6% Similarity=-0.044 Sum_probs=58.6
Q ss_pred ceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCC
Q 011049 53 LALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTP 132 (494)
Q Consensus 53 ~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~ 132 (494)
+-|+|+..++ .+.|.++|.++. +........+. ..-...+||||++++... +
T Consensus 5 ~~l~~V~~~~--~~~v~viD~~t~--~~~~~i~~~~~------~h~~~~~s~Dgr~~yv~~-------------r----- 56 (369)
T PF02239_consen 5 GNLFYVVERG--SGSVAVIDGATN--KVVARIPTGGA------PHAGLKFSPDGRYLYVAN-------------R----- 56 (369)
T ss_dssp GGEEEEEEGG--GTEEEEEETTT---SEEEEEE-STT------EEEEEE-TT-SSEEEEEE-------------T-----
T ss_pred ccEEEEEecC--CCEEEEEECCCC--eEEEEEcCCCC------ceeEEEecCCCCEEEEEc-------------C-----
Confidence 4466666554 478999998765 32222221111 011123799999876653 1
Q ss_pred CCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCcee
Q 011049 133 EGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 207 (494)
Q Consensus 133 ~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~ 207 (494)
++ .+.++|+.+++...-...... . ....+|+||+.++..... |+.+.++|.++.+..
T Consensus 57 dg---~vsviD~~~~~~v~~i~~G~~-----~-------~~i~~s~DG~~~~v~n~~---~~~v~v~D~~tle~v 113 (369)
T PF02239_consen 57 DG---TVSVIDLATGKVVATIKVGGN-----P-------RGIAVSPDGKYVYVANYE---PGTVSVIDAETLEPV 113 (369)
T ss_dssp TS---EEEEEETTSSSEEEEEE-SSE-----E-------EEEEE--TTTEEEEEEEE---TTEEEEEETTT--EE
T ss_pred CC---eEEEEECCcccEEEEEecCCC-----c-------ceEEEcCCCCEEEEEecC---CCceeEeccccccce
Confidence 11 388999999875433222111 0 124788999988776543 678888987765543
|
... |
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.2 Score=50.67 Aligned_cols=81 Identities=17% Similarity=0.227 Sum_probs=55.3
Q ss_pred eeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 19 IIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
.||+|++ ++|+... |...++..++..|+|+|..|+-.+|..+ -++|-+=-..+..|...+...-.
T Consensus 459 ~IfvWS~---qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkT--VRiW~if~s~~~vEtl~i~sdvl--------- 524 (893)
T KOG0291|consen 459 EIFVWSV---QTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKT--VRIWDIFSSSGTVETLEIRSDVL--------- 524 (893)
T ss_pred EEEEEEe---ecCeeeehhcCCCCcceeeEEccccCeEEeccccce--EEEEEeeccCceeeeEeecccee---------
Confidence 7999999 8777654 4445566677889999999888888665 56776644444334444433221
Q ss_pred CceeeCCCCCEEEEEEe
Q 011049 98 PMMTRTSTGTNVIAKIK 114 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~~ 114 (494)
.+.++|||+.|+....
T Consensus 525 -~vsfrPdG~elaVaTl 540 (893)
T KOG0291|consen 525 -AVSFRPDGKELAVATL 540 (893)
T ss_pred -EEEEcCCCCeEEEEEe
Confidence 1238999999998774
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=94.46 E-value=2 Score=38.90 Aligned_cols=141 Identities=14% Similarity=0.072 Sum_probs=76.6
Q ss_pred CCccceeeeccCCCCCCCC-CeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccccc
Q 011049 14 VSPRDIIYTQPAEPAEGEK-PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~-~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~ 92 (494)
.+..+.|+++++ ..++ ...+...........|+|+++.|+... . ...+.+.++..+ ...........
T Consensus 69 ~~~~~~i~i~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~---~~~i~~~~~~~~--~~~~~~~~~~~--- 136 (289)
T cd00200 69 GSSDKTIRLWDL---ETGECVRTLTGHTSYVSSVAFSPDGRILSSSS-R---DKTIKVWDVETG--KCLTTLRGHTD--- 136 (289)
T ss_pred EcCCCeEEEEEc---CcccceEEEeccCCcEEEEEEcCCCCEEEEec-C---CCeEEEEECCCc--EEEEEeccCCC---
Confidence 344678889988 5433 334444444556788999976555432 1 457888887754 32322221110
Q ss_pred CCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCC
Q 011049 93 SDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQG 172 (494)
Q Consensus 93 ~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~ 172 (494)
.-..+.|+|+++.++.... .+ .+.++|+.+++.......... .-.
T Consensus 137 ---~i~~~~~~~~~~~l~~~~~------------------~~---~i~i~d~~~~~~~~~~~~~~~-----------~i~ 181 (289)
T cd00200 137 ---WVNSVAFSPDGTFVASSSQ------------------DG---TIKLWDLRTGKCVATLTGHTG-----------EVN 181 (289)
T ss_pred ---cEEEEEEcCcCCEEEEEcC------------------CC---cEEEEEccccccceeEecCcc-----------ccc
Confidence 0112348999776654320 11 377788876654443332211 011
Q ss_pred cccccccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 173 EEDINLNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 173 ~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
...++++++.+++... ...+.+++...++
T Consensus 182 ~~~~~~~~~~l~~~~~----~~~i~i~d~~~~~ 210 (289)
T cd00200 182 SVAFSPDGEKLLSSSS----DGTIKLWDLSTGK 210 (289)
T ss_pred eEEECCCcCEEEEecC----CCcEEEEECCCCc
Confidence 2367788876665433 3567777776544
|
|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.079 Score=51.62 Aligned_cols=85 Identities=9% Similarity=0.092 Sum_probs=53.3
Q ss_pred hhHHHHHhCCeEEEeCCCCCCCCCCCCCCCch-hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCC
Q 011049 288 TSSLIFLARRFAVLAGPSIPIIGEGDKLPNDR-FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP 366 (494)
Q Consensus 288 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~-~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p 366 (494)
.....|.+.||..-. ...+..-.+.... ..+.....+...|+.+.+.. ..+|.|+||||||.++..++...+
T Consensus 69 ~li~~L~~~GY~~~~----~l~~~pYDWR~~~~~~~~~~~~lk~~ie~~~~~~---~~kv~li~HSmGgl~~~~fl~~~~ 141 (389)
T PF02450_consen 69 KLIENLEKLGYDRGK----DLFAAPYDWRLSPAERDEYFTKLKQLIEEAYKKN---GKKVVLIAHSMGGLVARYFLQWMP 141 (389)
T ss_pred HHHHHHHhcCcccCC----EEEEEeechhhchhhHHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCchHHHHHHHhcc
Confidence 345577888876421 0111111221111 12344566677777776643 479999999999999999988774
Q ss_pred C------ceeEEEeCCCCC
Q 011049 367 H------LFCCGIARSGSY 379 (494)
Q Consensus 367 ~------~~~a~v~~~~~~ 379 (494)
. .++..|.+++..
T Consensus 142 ~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 142 QEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred chhhHHhhhhEEEEeCCCC
Confidence 3 478888887754
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown] | Back alignment and domain information |
|---|
Probab=94.42 E-value=1.6 Score=40.59 Aligned_cols=138 Identities=11% Similarity=0.086 Sum_probs=82.4
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
+.=|++++. .|..+-.+|..+-......||.||..||- ..- ..+|.+....++ ..+.....+..+ -
T Consensus 86 D~AflW~~~--~ge~~~eltgHKDSVt~~~FshdgtlLAT-Gdm---sG~v~v~~~stg--~~~~~~~~e~~d------i 151 (399)
T KOG0296|consen 86 DLAFLWDIS--TGEFAGELTGHKDSVTCCSFSHDGTLLAT-GDM---SGKVLVFKVSTG--GEQWKLDQEVED------I 151 (399)
T ss_pred ceEEEEEcc--CCcceeEecCCCCceEEEEEccCceEEEe-cCC---CccEEEEEcccC--ceEEEeecccCc------e
Confidence 356777773 23356678887777778899999987663 222 345666665655 334333333222 1
Q ss_pred CceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccccc
Q 011049 98 PMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDIN 177 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s 177 (494)
-.++|-|-+..++.-.. ++. +|.+.+.++...++....+. +-....|.
T Consensus 152 eWl~WHp~a~illAG~~------------------DGs---vWmw~ip~~~~~kv~~Gh~~-----------~ct~G~f~ 199 (399)
T KOG0296|consen 152 EWLKWHPRAHILLAGST------------------DGS---VWMWQIPSQALCKVMSGHNS-----------PCTCGEFI 199 (399)
T ss_pred EEEEecccccEEEeecC------------------CCc---EEEEECCCcceeeEecCCCC-----------Cccccccc
Confidence 13458998876655431 222 77777777555555554432 11224789
Q ss_pred ccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 178 LNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 178 ~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
|||++++..+. -..|.+++++++.
T Consensus 200 pdGKr~~tgy~----dgti~~Wn~ktg~ 223 (399)
T KOG0296|consen 200 PDGKRILTGYD----DGTIIVWNPKTGQ 223 (399)
T ss_pred CCCceEEEEec----CceEEEEecCCCc
Confidence 99988776554 3567788888774
|
|
| >KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.49 Score=45.90 Aligned_cols=59 Identities=7% Similarity=0.035 Sum_probs=36.4
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeec-ccccccCCCCCCceeeCCCCCEEEEEE
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR-VFENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~-~~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
..++||||+.++-+. ....++++|-.+| +..-..+. +.... +-..+.||||+++++-.+
T Consensus 195 ~VRysPDG~~Fat~g----sDgki~iyDGktg--e~vg~l~~~~aHkG----sIfalsWsPDs~~~~T~S 254 (603)
T KOG0318|consen 195 CVRYSPDGSRFATAG----SDGKIYIYDGKTG--EKVGELEDSDAHKG----SIFALSWSPDSTQFLTVS 254 (603)
T ss_pred eEEECCCCCeEEEec----CCccEEEEcCCCc--cEEEEecCCCCccc----cEEEEEECCCCceEEEec
Confidence 347999999766543 2457999987766 43333331 11110 122456999999998765
|
|
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.042 Score=50.78 Aligned_cols=72 Identities=21% Similarity=0.296 Sum_probs=41.7
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEE
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYIL 124 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~ 124 (494)
..+|||||+.|+--+-.. --++|-++..+. ++.-.+..+.. . .+.|||||++|+-...
T Consensus 120 ~~~fsp~g~~l~tGsGD~--TvR~WD~~TeTp------~~t~KgH~~WV--l--cvawsPDgk~iASG~~---------- 177 (480)
T KOG0271|consen 120 SVQFSPTGSRLVTGSGDT--TVRLWDLDTETP------LFTCKGHKNWV--L--CVAWSPDGKKIASGSK---------- 177 (480)
T ss_pred EEEecCCCceEEecCCCc--eEEeeccCCCCc------ceeecCCccEE--E--EEEECCCcchhhcccc----------
Confidence 357999999988654222 246666655543 22222222110 1 1239999999986542
Q ss_pred EccCCCCCCCCCCceEeeecCCCce
Q 011049 125 LNGRGFTPEGNIPFLDLFDINTGSK 149 (494)
Q Consensus 125 ~~~~g~~~~~~~~~l~~~d~~~g~~ 149 (494)
++ .|..+|+++|+.
T Consensus 178 --------dg---~I~lwdpktg~~ 191 (480)
T KOG0271|consen 178 --------DG---SIRLWDPKTGQQ 191 (480)
T ss_pred --------CC---eEEEecCCCCCc
Confidence 22 277788877753
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.4 Score=43.50 Aligned_cols=142 Identities=10% Similarity=0.005 Sum_probs=70.5
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceec-CCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc-ccCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWC-DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN-VYSDP 95 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~ws-pDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~-~~~~~ 95 (494)
+.||.++. ++++.+.+... . ..+.+.. +||+ |++. . ...+.++++.++ +.+.+....... ....|
T Consensus 22 ~~i~~~~~---~~~~~~~~~~~-~-~~G~~~~~~~g~-l~v~-~----~~~~~~~d~~~g--~~~~~~~~~~~~~~~~~~ 88 (246)
T PF08450_consen 22 GRIYRVDP---DTGEVEVIDLP-G-PNGMAFDRPDGR-LYVA-D----SGGIAVVDPDTG--KVTVLADLPDGGVPFNRP 88 (246)
T ss_dssp TEEEEEET---TTTEEEEEESS-S-EEEEEEECTTSE-EEEE-E----TTCEEEEETTTT--EEEEEEEEETTCSCTEEE
T ss_pred CEEEEEEC---CCCeEEEEecC-C-CceEEEEccCCE-EEEE-E----cCceEEEecCCC--cEEEEeeccCCCcccCCC
Confidence 45555555 44443332222 2 2334555 6754 3333 2 223455588776 666666553111 11111
Q ss_pred CCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccc
Q 011049 96 GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEED 175 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~ 175 (494)
.. +...|||+ ++++.+... .........+++++.+ ++.+.+...-.. .+...
T Consensus 89 ND--~~vd~~G~-ly~t~~~~~------------~~~~~~~g~v~~~~~~-~~~~~~~~~~~~------------pNGi~ 140 (246)
T PF08450_consen 89 ND--VAVDPDGN-LYVTDSGGG------------GASGIDPGSVYRIDPD-GKVTVVADGLGF------------PNGIA 140 (246)
T ss_dssp EE--EEE-TTS--EEEEEECCB------------CTTCGGSEEEEEEETT-SEEEEEEEEESS------------EEEEE
T ss_pred ce--EEEcCCCC-EEEEecCCC------------ccccccccceEEECCC-CeEEEEecCccc------------ccceE
Confidence 22 23789998 766654210 0000000358999988 666665543211 12347
Q ss_pred ccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 176 INLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 176 ~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
|++|++.+++..+. ...|+.++++.
T Consensus 141 ~s~dg~~lyv~ds~---~~~i~~~~~~~ 165 (246)
T PF08450_consen 141 FSPDGKTLYVADSF---NGRIWRFDLDA 165 (246)
T ss_dssp EETTSSEEEEEETT---TTEEEEEEEET
T ss_pred ECCcchheeecccc---cceeEEEeccc
Confidence 89999888765432 34588888753
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.039 Score=54.07 Aligned_cols=67 Identities=15% Similarity=0.046 Sum_probs=50.8
Q ss_pred CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCccc----HHHHHHHHHHHHHHhcCCC
Q 011049 416 KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAREN----VMHVIWETDRWLQKYCLSN 486 (494)
Q Consensus 416 ~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~----~~~~~~~~~~fl~~~l~~~ 486 (494)
+|+.|+...-|+. .+.+..++.+|++.|.++.+.+.++-.|+|..... -.+.-+.-++=|+..|...
T Consensus 788 Pp~~i~ac~mDP~----LDD~vmfA~kLr~lG~~v~l~vle~lPHGFLnft~ls~E~~~~~~~CI~rl~~~L~~~ 858 (880)
T KOG4388|consen 788 PPVHIVACAMDPM----LDDSVMFARKLRNLGQPVTLRVLEDLPHGFLNFTALSRETRQAAELCIERLRLVLTPP 858 (880)
T ss_pred CCceEEEeccCcc----hhHHHHHHHHHHhcCCceeehhhhcCCccceeHHhhCHHHHHHHHHHHHHHHHHhCCC
Confidence 6899999999997 68899999999999999999999999999854221 1233334455566666543
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.3 Score=48.12 Aligned_cols=62 Identities=15% Similarity=0.143 Sum_probs=46.4
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC--------------------Cc-EEEEEcCCCCCccCCcccHHHHHH
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHG--------------------AL-SRLVLLPFEHHVYAARENVMHVIW 473 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g--------------------~~-~~~~~~~~~~H~~~~~~~~~~~~~ 473 (494)
..++||..|..|..|+ ....+.+.+.|+=.+ .+ ..++++.++||... ..++..+.
T Consensus 347 ~irVLiY~Gd~D~icn--~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp--~qP~~al~ 422 (433)
T PLN03016 347 GYRSLIYSGDHDIAVP--FLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE--YRPNETFI 422 (433)
T ss_pred CceEEEEECCccccCC--cHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC--CCHHHHHH
Confidence 3699999999999988 888889998886211 12 56777889999873 35667777
Q ss_pred HHHHHHH
Q 011049 474 ETDRWLQ 480 (494)
Q Consensus 474 ~~~~fl~ 480 (494)
.+..|+.
T Consensus 423 m~~~Fi~ 429 (433)
T PLN03016 423 MFQRWIS 429 (433)
T ss_pred HHHHHHc
Confidence 6777764
|
|
| >KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.26 Score=48.88 Aligned_cols=88 Identities=13% Similarity=0.019 Sum_probs=56.9
Q ss_pred CCccceeeeccCCCCCCCCC-eeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccccc
Q 011049 14 VSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~-~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~ 92 (494)
.+|...|=|||+ ..++. -+|......+.+.+|||||+.|+-+.. ...|.++....+ ...+.+.++...-
T Consensus 696 asyd~Ti~lWDl---~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcK----Dg~~rVy~Prs~---e~pv~Eg~gpvgt 765 (1012)
T KOG1445|consen 696 ASYDSTIELWDL---ANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCK----DGTLRVYEPRSR---EQPVYEGKGPVGT 765 (1012)
T ss_pred hhccceeeeeeh---hhhhhhheeccCcCceeEEEECCCCcceeeeec----CceEEEeCCCCC---CCccccCCCCccC
Confidence 456667778888 44433 245555566778999999999997763 456888877654 3556666655421
Q ss_pred CCCCCCceeeCCCCCEEEEEEe
Q 011049 93 SDPGSPMMTRTSTGTNVIAKIK 114 (494)
Q Consensus 93 ~~~~~~~~~~spDG~~i~~~~~ 114 (494)
..-.+.|.=||+.|+....
T Consensus 766 ---RgARi~wacdgr~viv~Gf 784 (1012)
T KOG1445|consen 766 ---RGARILWACDGRIVIVVGF 784 (1012)
T ss_pred ---cceeEEEEecCcEEEEecc
Confidence 1222348889987777653
|
|
| >TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2 | Back alignment and domain information |
|---|
Probab=93.99 E-value=4.7 Score=39.58 Aligned_cols=114 Identities=22% Similarity=0.156 Sum_probs=65.0
Q ss_pred CCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC--------CCCCccccc--------ccccccH---
Q 011049 339 GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL--------TPFGFQTEF--------RTLWEAT--- 399 (494)
Q Consensus 339 ~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~--------~~~~~~~~~--------~~~~~~~--- 399 (494)
+ .+++.+.+.|.|||.+-|++.++.- .-.|+|..-|+++.-. .+..+.... ....++.
T Consensus 353 g-F~~~qLILSGlSMGTfgAlYYga~l--~P~AIiVgKPL~NLGtiA~n~rL~RP~~F~TslDvl~~~~g~~s~~~i~~l 429 (511)
T TIGR03712 353 G-FDHDQLILSGLSMGTFGALYYGAKL--SPHAIIVGKPLVNLGTIASRMRLDRPDEFGTALDILLLNTGGTSSEDVVKL 429 (511)
T ss_pred C-CCHHHeeeccccccchhhhhhcccC--CCceEEEcCcccchhhhhccccccCCCCCchHHHhHHhhcCCCCHHHHHHH
Confidence 5 5788999999999999999998875 2377888888876311 111111100 0001111
Q ss_pred -HHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCc
Q 011049 400 -NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV 461 (494)
Q Consensus 400 -~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 461 (494)
+.+++ -+.+.+--++...+..=.+|..= ...-.++...|.+.++++--.-+|| .|+
T Consensus 430 n~~fW~--~f~~~d~S~T~F~i~YM~~DDYD---~~A~~~L~~~l~~~~~~v~~kG~~G-RHN 486 (511)
T TIGR03712 430 DNRFWK--KFKKSDLSKTTFAIAYMKNDDYD---PTAFQDLLPYLSKQGAQVMSKGIPG-RHN 486 (511)
T ss_pred HHHHHH--HHhhcCcccceEEEEeeccccCC---HHHHHHHHHHHHhcCCEEEecCCCC-CCC
Confidence 11111 11122223466666555555542 4556788888888877655555555 454
|
This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=93.92 E-value=3.1 Score=39.90 Aligned_cols=64 Identities=11% Similarity=-0.072 Sum_probs=31.2
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceE---eeecc--ccc--ccCCCCCC-ceeeCCCCCEEEEEE
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRV---LFDRV--FEN--VYSDPGSP-MMTRTSTGTNVIAKI 113 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~---lt~~~--~~~--~~~~~~~~-~~~~spDG~~i~~~~ 113 (494)
..+.+|||+.|+. +++.+ ..+.+++++.. +.... +.... +.+ .... ..| .+.++|||++++..-
T Consensus 91 ~i~~~~~g~~l~v-any~~--g~v~v~~l~~~-g~l~~~~~~~~~~g~g~~~~rq~~-~h~H~v~~~pdg~~v~v~d 162 (345)
T PF10282_consen 91 HIAVDPDGRFLYV-ANYGG--GSVSVFPLDDD-GSLGEVVQTVRHEGSGPNPDRQEG-PHPHQVVFSPDGRFVYVPD 162 (345)
T ss_dssp EEEECTTSSEEEE-EETTT--TEEEEEEECTT-SEEEEEEEEEESEEEESSTTTTSS-TCEEEEEE-TTSSEEEEEE
T ss_pred EEEEecCCCEEEE-EEccC--CeEEEEEccCC-cccceeeeecccCCCCCccccccc-ccceeEEECCCCCEEEEEe
Confidence 4568899987554 55543 45666666541 12222 22111 111 1111 112 234899999886653
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.19 Score=43.59 Aligned_cols=67 Identities=16% Similarity=0.076 Sum_probs=44.3
Q ss_pred eEEEeCCCCCCCCCCCC----CCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC
Q 011049 298 FAVLAGPSIPIIGEGDK----LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 298 ~~v~~~~~~~~~g~g~~----~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~ 365 (494)
..|++|-||-..-.... .......+-...|+.+|.++-+++.. +...+.|.|||.|+.+...++...
T Consensus 46 ~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 46 CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHH
Confidence 45666666543222111 11233345568899999998777642 335799999999999999998764
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=93.82 E-value=2.9 Score=37.85 Aligned_cols=138 Identities=12% Similarity=0.074 Sum_probs=73.6
Q ss_pred cceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
.+.|+++++ ..++... +...........|+|+++.|+..+ . ...+++.++..+ +..........
T Consensus 114 ~~~i~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~---~~~i~i~d~~~~--~~~~~~~~~~~------ 178 (289)
T cd00200 114 DKTIKVWDV---ETGKCLTTLRGHTDWVNSVAFSPDGTFVASSS-Q---DGTIKLWDLRTG--KCVATLTGHTG------ 178 (289)
T ss_pred CCeEEEEEC---CCcEEEEEeccCCCcEEEEEEcCcCCEEEEEc-C---CCcEEEEEcccc--ccceeEecCcc------
Confidence 678888887 4343333 332333456788999987666543 1 346888887755 33333332111
Q ss_pred CCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccc
Q 011049 96 GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEED 175 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~ 175 (494)
.-..+.|+|+|+.+++... ++ .+.++|+.+++.......... .. ....
T Consensus 179 ~i~~~~~~~~~~~l~~~~~------------------~~---~i~i~d~~~~~~~~~~~~~~~----~i-------~~~~ 226 (289)
T cd00200 179 EVNSVAFSPDGEKLLSSSS------------------DG---TIKLWDLSTGKCLGTLRGHEN----GV-------NSVA 226 (289)
T ss_pred ccceEEECCCcCEEEEecC------------------CC---cEEEEECCCCceecchhhcCC----ce-------EEEE
Confidence 0112348999988877641 11 377888877654443321110 00 1235
Q ss_pred ccccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 176 INLNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 176 ~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
+++++ .+++... ....+++++...++
T Consensus 227 ~~~~~-~~~~~~~---~~~~i~i~~~~~~~ 252 (289)
T cd00200 227 FSPDG-YLLASGS---EDGTIRVWDLRTGE 252 (289)
T ss_pred EcCCC-cEEEEEc---CCCcEEEEEcCCce
Confidence 66664 3444332 23467777765433
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=93.57 E-value=0.11 Score=51.74 Aligned_cols=68 Identities=13% Similarity=0.258 Sum_probs=54.3
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC-C-------cEEEEEcCCCCCccCCc-ccHHHHHHHHHHHHHHhcC
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHG-A-------LSRLVLLPFEHHVYAAR-ENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g-~-------~~~~~~~~~~~H~~~~~-~~~~~~~~~~~~fl~~~l~ 484 (494)
--.+|+.||..|+.|| +..+..+++++.+.- . -+++.+.||.+|..... ...-+.+..+.+|.++-..
T Consensus 353 GGKLI~~HG~aD~~I~--p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~A 429 (474)
T PF07519_consen 353 GGKLILYHGWADPLIP--PQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGKA 429 (474)
T ss_pred CCeEEEEecCCCCccC--CCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCCC
Confidence 3689999999999998 999999999987642 1 26899999999987654 3344788899999986443
|
It also includes several bacterial homologues of unknown function. |
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=93.55 E-value=4.9 Score=40.55 Aligned_cols=55 Identities=13% Similarity=0.132 Sum_probs=35.6
Q ss_pred CccceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
+..+.|.++|+ ..++... +..........+|+|||+.|+..+. ...|.+.|+..+
T Consensus 145 s~DgtVrIWDl---~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~----Dg~IrIwD~rsg 200 (493)
T PTZ00421 145 GADMVVNVWDV---ERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSK----DKKLNIIDPRDG 200 (493)
T ss_pred eCCCEEEEEEC---CCCeEEEEEcCCCCceEEEEEECCCCEEEEecC----CCEEEEEECCCC
Confidence 44567888888 5554433 3333344567889999998775542 346777787765
|
|
| >KOG0288 consensus WD40 repeat protein TipD [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.53 E-value=0.58 Score=44.03 Aligned_cols=100 Identities=18% Similarity=0.159 Sum_probs=63.8
Q ss_pred CCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCE
Q 011049 29 EGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTN 108 (494)
Q Consensus 29 ~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~ 108 (494)
.++.+++--...+...+..-|+||..|.-.+ +...+-++|+.+. +.+..+..++---..+ -. .+++||||++
T Consensus 330 Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsss----RDdtl~viDlRt~--eI~~~~sA~g~k~asD-wt-rvvfSpd~~Y 401 (459)
T KOG0288|consen 330 RSADKTRSVPLGGRVTSLDLSMDGLELLSSS----RDDTLKVIDLRTK--EIRQTFSAEGFKCASD-WT-RVVFSPDGSY 401 (459)
T ss_pred cCCceeeEeecCcceeeEeeccCCeEEeeec----CCCceeeeecccc--cEEEEeeccccccccc-cc-eeEECCCCce
Confidence 3445555445555777888999999877553 3556888888876 6666655443211111 11 2338999998
Q ss_pred EEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCc
Q 011049 109 VIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNR 157 (494)
Q Consensus 109 i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~ 157 (494)
++-.+. ++ .++++++.+|+.+.+-...+
T Consensus 402 vaAGS~------------------dg---sv~iW~v~tgKlE~~l~~s~ 429 (459)
T KOG0288|consen 402 VAAGSA------------------DG---SVYIWSVFTGKLEKVLSLST 429 (459)
T ss_pred eeeccC------------------CC---cEEEEEccCceEEEEeccCC
Confidence 876542 22 39999999999887665543
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.49 E-value=0.17 Score=48.29 Aligned_cols=36 Identities=14% Similarity=0.186 Sum_probs=31.5
Q ss_pred CCcEEEEecChHHHHHHHHHHhCC--CceeEEEeCCCC
Q 011049 343 PSRIAVGGHSYGAFMTAHLLAHAP--HLFCCGIARSGS 378 (494)
Q Consensus 343 ~~ri~i~G~S~GG~~a~~~~~~~p--~~~~a~v~~~~~ 378 (494)
..++.++|||+||..+.+++...+ .+++..+.+++.
T Consensus 126 a~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 126 AKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred CCceEEEeecccchhhHHHHhhcCccceEEEEEEeccC
Confidence 378999999999999999999987 788888887764
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=93.37 E-value=0.73 Score=39.06 Aligned_cols=56 Identities=11% Similarity=0.092 Sum_probs=38.5
Q ss_pred chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEe
Q 011049 318 DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIA 374 (494)
Q Consensus 318 ~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~ 374 (494)
..+.+....++.+.++-|.... ....++.++|||||+.++..++...+.....+|.
T Consensus 84 ~~~A~~ga~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~ 139 (177)
T PF06259_consen 84 PGYARAGAPRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVL 139 (177)
T ss_pred chHHHHHHHHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEE
Confidence 3444555666666666666554 3457999999999999999888774444544443
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >KOG1274 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.37 E-value=0.24 Score=51.14 Aligned_cols=89 Identities=8% Similarity=-0.036 Sum_probs=51.1
Q ss_pred CCCccceeeeccCCCCCCCCCe-eccc--------cccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEe
Q 011049 13 EVSPRDIIYTQPAEPAEGEKPE-ILHK--------LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 83 (494)
Q Consensus 13 ~~~~~~~i~~~~~~~~~~~~~~-~lt~--------~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~l 83 (494)
.++-.|.|+++++ +.+... .||. ..-....|+|+|||..+++... .+.|-+++..+....-+..
T Consensus 155 vss~dG~v~iw~~---~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~----d~~Vkvy~r~~we~~f~Lr 227 (933)
T KOG1274|consen 155 VSSCDGKVQIWDL---QDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPV----DNTVKVYSRKGWELQFKLR 227 (933)
T ss_pred EEecCceEEEEEc---ccchhhhhcccCCccccccccceeeeeeecCCCCeEEeecc----CCeEEEEccCCceeheeec
Confidence 3556778999988 433221 1221 1123457899999877777653 3467788877762221222
Q ss_pred eecccccccCCCCCCceeeCCCCCEEEEEEe
Q 011049 84 FDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 114 (494)
Q Consensus 84 t~~~~~~~~~~~~~~~~~~spDG~~i~~~~~ 114 (494)
.+.... .--.+.|||.|++||-...
T Consensus 228 ~~~~ss------~~~~~~wsPnG~YiAAs~~ 252 (933)
T KOG1274|consen 228 DKLSSS------KFSDLQWSPNGKYIAASTL 252 (933)
T ss_pred cccccc------ceEEEEEcCCCcEEeeecc
Confidence 222111 1113449999999987653
|
|
| >KOG2055 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.29 E-value=1.1 Score=42.99 Aligned_cols=117 Identities=5% Similarity=-0.050 Sum_probs=65.6
Q ss_pred cccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceE
Q 011049 43 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIY 122 (494)
Q Consensus 43 ~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~ 122 (494)
.....|+|+|+..+|++.+ ..-+|..|+.+. ....+..-.+... -+...+- .|||+.+|++...
T Consensus 260 i~~a~f~p~G~~~i~~s~r---rky~ysyDle~a--k~~k~~~~~g~e~-~~~e~Fe--VShd~~fia~~G~-------- 323 (514)
T KOG2055|consen 260 IQKAEFAPNGHSVIFTSGR---RKYLYSYDLETA--KVTKLKPPYGVEE-KSMERFE--VSHDSNFIAIAGN-------- 323 (514)
T ss_pred cceeeecCCCceEEEeccc---ceEEEEeecccc--ccccccCCCCccc-chhheeE--ecCCCCeEEEccc--------
Confidence 3445799999977777643 446888888765 4344433222210 0012222 5999998888642
Q ss_pred EEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcC
Q 011049 123 ILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 202 (494)
Q Consensus 123 ~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~ 202 (494)
.-+|.++...|++...-..-+|. + ....|+.|+..++.+.. ..++|+.++.
T Consensus 324 -------------~G~I~lLhakT~eli~s~KieG~---------v---~~~~fsSdsk~l~~~~~----~GeV~v~nl~ 374 (514)
T KOG2055|consen 324 -------------NGHIHLLHAKTKELITSFKIEGV---------V---SDFTFSSDSKELLASGG----TGEVYVWNLR 374 (514)
T ss_pred -------------CceEEeehhhhhhhhheeeeccE---------E---eeEEEecCCcEEEEEcC----CceEEEEecC
Confidence 22588887777653221122221 0 12256777766665433 2488888876
Q ss_pred CC
Q 011049 203 LK 204 (494)
Q Consensus 203 ~~ 204 (494)
..
T Consensus 375 ~~ 376 (514)
T KOG2055|consen 375 QN 376 (514)
T ss_pred Cc
Confidence 54
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.28 E-value=3.2 Score=38.89 Aligned_cols=50 Identities=10% Similarity=0.061 Sum_probs=30.9
Q ss_pred ceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcC
Q 011049 138 FLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 202 (494)
Q Consensus 138 ~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~ 202 (494)
.||++|..++ .+++...+- ...+...||||+++++++-+. ...+++++++
T Consensus 144 ~lyr~~p~g~-~~~l~~~~~-----------~~~NGla~SpDg~tly~aDT~---~~~i~r~~~d 193 (307)
T COG3386 144 SLYRVDPDGG-VVRLLDDDL-----------TIPNGLAFSPDGKTLYVADTP---ANRIHRYDLD 193 (307)
T ss_pred eEEEEcCCCC-EEEeecCcE-----------EecCceEECCCCCEEEEEeCC---CCeEEEEecC
Confidence 4999998654 444443321 112345899999988775432 4567777665
|
|
| >KOG2394 consensus WD40 protein DMR-N9 [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.23 Score=48.20 Aligned_cols=53 Identities=21% Similarity=0.313 Sum_probs=34.7
Q ss_pred eeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccC
Q 011049 101 TRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQ 180 (494)
Q Consensus 101 ~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~ 180 (494)
++||||+++|..+ .|| .|.++|..+.+..-+ ..-||.+.+++ .|||||
T Consensus 297 ~FS~DG~~LA~VS-------------qDG--------fLRvF~fdt~eLlg~----mkSYFGGLLCv-------cWSPDG 344 (636)
T KOG2394|consen 297 AFSPDGKYLATVS-------------QDG--------FLRIFDFDTQELLGV----MKSYFGGLLCV-------CWSPDG 344 (636)
T ss_pred eEcCCCceEEEEe-------------cCc--------eEEEeeccHHHHHHH----HHhhccceEEE-------EEcCCc
Confidence 4899999999886 233 277777776443221 11377666666 899998
Q ss_pred cEEEE
Q 011049 181 LKILT 185 (494)
Q Consensus 181 ~~~~~ 185 (494)
+.|+.
T Consensus 345 KyIvt 349 (636)
T KOG2394|consen 345 KYIVT 349 (636)
T ss_pred cEEEe
Confidence 76654
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.23 E-value=9.7 Score=38.93 Aligned_cols=62 Identities=11% Similarity=-0.001 Sum_probs=41.3
Q ss_pred ccceecCCCceEEEEeeeec-cceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEec
Q 011049 44 RSVSWCDDSLALVNETWYKT-SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKK 115 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~-~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~ 115 (494)
+..+-|||.+.++|+-+..+ ++-.+-+.++.+|..-+..++. ..+..+|.+|++.+.|+...
T Consensus 132 g~~~~s~D~~~la~s~D~~G~e~y~lr~kdL~tg~~~~d~i~~----------~~~~~~Wa~d~~~lfYt~~d 194 (682)
T COG1770 132 GAASISPDHNLLAYSVDVLGDEQYTLRFKDLATGEELPDEITN----------TSGSFAWAADGKTLFYTRLD 194 (682)
T ss_pred eeeeeCCCCceEEEEEecccccEEEEEEEecccccccchhhcc----------cccceEEecCCCeEEEEEEc
Confidence 45678999999999876332 4667777788876211111111 23445599999999999854
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.08 E-value=0.84 Score=42.28 Aligned_cols=85 Identities=13% Similarity=-0.006 Sum_probs=51.7
Q ss_pred ccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEE
Q 011049 44 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYI 123 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~ 123 (494)
+....||||+. +|.++|.-..--+|.++.++| ..+.+...+... ..|..+. .+|+|++|+....
T Consensus 247 aaIhis~dGrF-LYasNRg~dsI~~f~V~~~~g--~L~~~~~~~teg--~~PR~F~--i~~~g~~Liaa~q--------- 310 (346)
T COG2706 247 AAIHISPDGRF-LYASNRGHDSIAVFSVDPDGG--KLELVGITPTEG--QFPRDFN--INPSGRFLIAANQ--------- 310 (346)
T ss_pred eEEEECCCCCE-EEEecCCCCeEEEEEEcCCCC--EEEEEEEeccCC--cCCccce--eCCCCCEEEEEcc---------
Confidence 45568999986 566676543345556666666 433333333222 2356666 7999998876541
Q ss_pred EEccCCCCCCCCCCceEeeecCCCceEEEE
Q 011049 124 LLNGRGFTPEGNIPFLDLFDINTGSKERIW 153 (494)
Q Consensus 124 ~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~ 153 (494)
+++...+|..|-++|+...+.
T Consensus 311 ---------~sd~i~vf~~d~~TG~L~~~~ 331 (346)
T COG2706 311 ---------KSDNITVFERDKETGRLTLLG 331 (346)
T ss_pred ---------CCCcEEEEEEcCCCceEEecc
Confidence 333445888888888765543
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=93.00 E-value=1.4 Score=41.21 Aligned_cols=165 Identities=11% Similarity=0.081 Sum_probs=81.9
Q ss_pred CCccceeeeccCCCCCCCCCeec-cc-----cccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecc
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEIL-HK-----LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV 87 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~l-t~-----~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~ 87 (494)
+|..|.+..+.+. +.|++.+- |. .+..+..|.++.++.+++|.+. ..+||.+++.+. +++..-..+
T Consensus 153 lC~DGsl~~v~Ld--~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy----~G~v~~~dlsg~--~~~~~~~~~ 224 (342)
T PF06433_consen 153 LCGDGSLLTVTLD--ADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSY----EGNVYSADLSGD--SAKFGKPWS 224 (342)
T ss_dssp EETTSCEEEEEET--STSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBT----TSEEEEEEETTS--SEEEEEEEE
T ss_pred EecCCceEEEEEC--CCCCEeEeeccccCCCCcccccccceECCCCeEEEEec----CCEEEEEeccCC--cccccCccc
Confidence 5666766666661 23444422 11 1223346678878888888763 457999999887 555433322
Q ss_pred c-ccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCC--CCCCceEeeecCCCceEEEEeeCcchhhhhe
Q 011049 88 F-ENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPE--GNIPFLDLFDINTGSKERIWESNREKYFETA 164 (494)
Q Consensus 88 ~-~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 164 (494)
. .+.....+ |-|-|.+++-.. .+....++.+. .|.... .....+|++|++++++...+.-...+
T Consensus 225 ~~t~~e~~~~-----WrPGG~Q~~A~~--~~~~rlyvLMh-~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~~~----- 291 (342)
T PF06433_consen 225 LLTDAEKADG-----WRPGGWQLIAYH--AASGRLYVLMH-QGGEGSHKDPGTEVWVYDLKTHKRVARIPLEHPI----- 291 (342)
T ss_dssp SS-HHHHHTT-----EEE-SSS-EEEE--TTTTEEEEEEE-E--TT-TTS-EEEEEEEETTTTEEEEEEEEEEEE-----
T ss_pred ccCccccccC-----cCCcceeeeeec--cccCeEEEEec-CCCCCCccCCceEEEEEECCCCeEEEEEeCCCcc-----
Confidence 1 00000013 888887643221 11223344443 232111 11347999999998876655533220
Q ss_pred eeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeE
Q 011049 165 VALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 208 (494)
Q Consensus 165 ~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~ 208 (494)
.+..+|.|.+=+++.... .-..|+++|..+++..+
T Consensus 292 -------~Si~Vsqd~~P~L~~~~~--~~~~l~v~D~~tGk~~~ 326 (342)
T PF06433_consen 292 -------DSIAVSQDDKPLLYALSA--GDGTLDVYDAATGKLVR 326 (342)
T ss_dssp -------SEEEEESSSS-EEEEEET--TTTEEEEEETTT--EEE
T ss_pred -------ceEEEccCCCcEEEEEcC--CCCeEEEEeCcCCcEEe
Confidence 012455666555554432 23578999988876543
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.89 E-value=0.92 Score=44.62 Aligned_cols=149 Identities=9% Similarity=-0.003 Sum_probs=73.9
Q ss_pred EEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCc---hhHHHHHhCCeEEEeC
Q 011049 227 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTP---TSSLIFLARRFAVLAG 303 (494)
Q Consensus 227 ~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~G~~v~~~ 303 (494)
+.+....+..+..|++.-.. +|.. .|+|||+-|||..+.-.....--+|.....-+. .....|-.. -.++..
T Consensus 49 v~v~~~~~~~LFYwf~eS~~-~P~~---dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~-aNiLfL 123 (454)
T KOG1282|consen 49 VTVNESEGRQLFYWFFESEN-NPET---DPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKE-ANILFL 123 (454)
T ss_pred EECCCCCCceEEEEEEEccC-CCCC---CCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCcccccc-ccEEEE
Confidence 44444567889999987653 2222 699999999985442111111111111110000 000011111 112222
Q ss_pred CCCCCCCCCCCCCC---chhHHHHHHHHHHHH-HHHHHcCCCCCCcEEEEecChHHHHHHHHH----HhC-----C-Cce
Q 011049 304 PSIPIIGEGDKLPN---DRFVEQLVSSAEAAV-EEVVRRGVADPSRIAVGGHSYGAFMTAHLL----AHA-----P-HLF 369 (494)
Q Consensus 304 ~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v-~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~----~~~-----p-~~~ 369 (494)
+..-..|+.-+... ..--+..++|...++ +|+.+.+....+.+.|.|.||+|..+-.+| ..+ | =-+
T Consensus 124 d~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNL 203 (454)
T KOG1282|consen 124 DQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINL 203 (454)
T ss_pred ecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccc
Confidence 22112233222111 011123345554444 677777666678899999999996554444 322 1 246
Q ss_pred eEEEeCCCCCC
Q 011049 370 CCGIARSGSYN 380 (494)
Q Consensus 370 ~a~v~~~~~~~ 380 (494)
++.+...|+.+
T Consensus 204 kG~~IGNg~td 214 (454)
T KOG1282|consen 204 KGYAIGNGLTD 214 (454)
T ss_pred eEEEecCcccC
Confidence 88888888755
|
|
| >KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown] | Back alignment and domain information |
|---|
Probab=92.85 E-value=0.34 Score=44.85 Aligned_cols=84 Identities=10% Similarity=0.011 Sum_probs=51.1
Q ss_pred cceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
-|+|++.|+ ..-++.. +-..+......+|||||+.||-.+..++ -|-+..+..| .++++.-.... +
T Consensus 152 ~GdV~l~d~---~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGT---VIRVf~v~~G----~kl~eFRRG~~---~ 218 (391)
T KOG2110|consen 152 SGDVVLFDT---INLQPVNTINAHKGPLAALAFSPDGTLLATASEKGT---VIRVFSVPEG----QKLYEFRRGTY---P 218 (391)
T ss_pred CceEEEEEc---ccceeeeEEEecCCceeEEEECCCCCEEEEeccCce---EEEEEEcCCc----cEeeeeeCCce---e
Confidence 578999998 5444443 3344555667889999999997765433 4444454444 34554432211 1
Q ss_pred CCC-ceeeCCCCCEEEEEE
Q 011049 96 GSP-MMTRTSTGTNVIAKI 113 (494)
Q Consensus 96 ~~~-~~~~spDG~~i~~~~ 113 (494)
.+. .+++|||+.+|...+
T Consensus 219 ~~IySL~Fs~ds~~L~~sS 237 (391)
T KOG2110|consen 219 VSIYSLSFSPDSQFLAASS 237 (391)
T ss_pred eEEEEEEECCCCCeEEEec
Confidence 111 234899999888776
|
|
| >KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=92.66 E-value=5.3 Score=39.16 Aligned_cols=86 Identities=5% Similarity=0.021 Sum_probs=45.8
Q ss_pred CCccceeeeccCCCCCCC-CCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccccc
Q 011049 14 VSPRDIIYTQPAEPAEGE-KPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~-~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~ 92 (494)
++....+|+.++ +.. ...+.|.......-.++||-|-+|+ .-+. ...+-+-+... +...|..+-..-
T Consensus 35 Y~nGksv~ir~i---~~~~~~~iYtEH~~~vtVAkySPsG~yiA---SGD~-sG~vRIWdtt~---~~hiLKnef~v~-- 102 (603)
T KOG0318|consen 35 YTNGKSVIIRNI---DNPASVDIYTEHAHQVTVAKYSPSGFYIA---SGDV-SGKVRIWDTTQ---KEHILKNEFQVL-- 102 (603)
T ss_pred EeCCCEEEEEEC---CCccceeeeccccceeEEEEeCCCceEEe---ecCC-cCcEEEEeccC---cceeeeeeeeec--
Confidence 344447788887 332 3344555544444557999997555 3222 23344444332 223444332111
Q ss_pred CCCCCC--ceeeCCCCCEEEEEEe
Q 011049 93 SDPGSP--MMTRTSTGTNVIAKIK 114 (494)
Q Consensus 93 ~~~~~~--~~~~spDG~~i~~~~~ 114 (494)
..| .+.|++||++|+....
T Consensus 103 ---aG~I~Di~Wd~ds~RI~avGE 123 (603)
T KOG0318|consen 103 ---AGPIKDISWDFDSKRIAAVGE 123 (603)
T ss_pred ---ccccccceeCCCCcEEEEEec
Confidence 222 1349999999998753
|
|
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=92.63 E-value=3.8 Score=38.77 Aligned_cols=69 Identities=17% Similarity=0.140 Sum_probs=60.2
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
..+.+.+.+..|.++| ..+.+++.+..+.+|..++..-+.+..|..........+.....+|+.+....
T Consensus 225 ~~~~ly~~s~~d~v~~--~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~ 293 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLP--ADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISS 293 (350)
T ss_pred cccceeecCCcccccc--HHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhcccc
Confidence 3677888899999988 99999999999999999999999999998766677778999999999988654
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.51 E-value=0.3 Score=47.06 Aligned_cols=42 Identities=24% Similarity=0.251 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 323 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 323 ~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
...+++...|+.++++..-..-+|.++|||+||.+|..+|..
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 345566677777776542222359999999999999988753
|
|
| >KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=92.50 E-value=3.5 Score=40.30 Aligned_cols=59 Identities=14% Similarity=0.097 Sum_probs=34.2
Q ss_pred eecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCce-eeCCCCCEEEE
Q 011049 47 SWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMM-TRTSTGTNVIA 111 (494)
Q Consensus 47 ~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~-~~spDG~~i~~ 111 (494)
.|-|+.+..+.++.+++ --+||-++--- +-+++.........- ..+.. .|+|||+.||-
T Consensus 275 ~whP~~k~~FlT~s~Dg-tlRiWdv~~~k---~q~qVik~k~~~g~R--v~~tsC~~nrdg~~iAa 334 (641)
T KOG0772|consen 275 CWHPDNKEEFLTCSYDG-TLRIWDVNNTK---SQLQVIKTKPAGGKR--VPVTSCAWNRDGKLIAA 334 (641)
T ss_pred ccccCcccceEEecCCC-cEEEEecCCch---hheeEEeeccCCCcc--cCceeeecCCCcchhhh
Confidence 69999999888887776 56777765322 223333332221000 11111 29999998754
|
|
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.50 E-value=0.1 Score=48.40 Aligned_cols=133 Identities=17% Similarity=0.210 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHc-CCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCC-CCCCCCC----------CCCC-----
Q 011049 325 VSSAEAAVEEVVRR-GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARS-GSYNKTL----------TPFG----- 387 (494)
Q Consensus 325 ~~d~~~~v~~l~~~-~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~-~~~~~~~----------~~~~----- 387 (494)
+..+..+++-..++ .-+.-++..|.|.|-=|..++..|...|.. .++|.++ -+.+... -.|.
T Consensus 214 v~a~srAMdlAq~eL~q~~Ik~F~VTGaSKRgWttwLTAIaDprv-~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~p 292 (507)
T COG4287 214 VYAVSRAMDLAQDELEQVEIKGFMVTGASKRGWTTWLTAIADPRV-FAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAP 292 (507)
T ss_pred HHHHHHHHHHHHhhhhheeeeeEEEeccccchHHHHHHHhcCcch-hhhhhhHHhhcccHHHHHHHHHhhCCCCCcccch
Confidence 44555555543332 224457899999999999999999988754 3444322 1111100 0000
Q ss_pred ccccc-ccccccH---HHHHhcCccccc-----cCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCC
Q 011049 388 FQTEF-RTLWEAT---NVYIEMSPITHA-----NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFE 458 (494)
Q Consensus 388 ~~~~~-~~~~~~~---~~~~~~sp~~~~-----~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 458 (494)
+..+. ....+.+ ....-.+|+.+. .++..|-+|+.+..|...+ ++.+.-++..|... .-+.+.|+.
T Consensus 293 yyaegi~erl~tp~fkqL~~IiDPlay~~try~~RLalpKyivnaSgDdff~--pDsa~lYyd~LPG~---kaLrmvPN~ 367 (507)
T COG4287 293 YYAEGIDERLETPLFKQLLEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFV--PDSANLYYDDLPGE---KALRMVPND 367 (507)
T ss_pred hHhhhHHHhhcCHHHHHHHHhhcHHHHhhhhhhhhccccceeecccCCcccC--CCccceeeccCCCc---eeeeeCCCC
Confidence 00000 0000111 223335676665 5677899999999888876 78888888888643 468899999
Q ss_pred CCccC
Q 011049 459 HHVYA 463 (494)
Q Consensus 459 ~H~~~ 463 (494)
.|...
T Consensus 368 ~H~~~ 372 (507)
T COG4287 368 PHNLI 372 (507)
T ss_pred cchhh
Confidence 99764
|
|
| >KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.48 E-value=0.6 Score=42.66 Aligned_cols=83 Identities=12% Similarity=0.142 Sum_probs=49.8
Q ss_pred CccceeeeccCCCCCCCCCe---eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccc
Q 011049 15 SPRDIIYTQPAEPAEGEKPE---ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV 91 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~---~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~ 91 (494)
+.++.|+++++ . +|. .+-.+....+..+|||||+.|+-.+...- .--+|-+....+ .+...+...
T Consensus 68 yk~~~vqvwsl---~--Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~l-riTVWSL~t~~~-----~~~~~pK~~- 135 (447)
T KOG4497|consen 68 YKDPKVQVWSL---V--QPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDL-RITVWSLNTQKG-----YLLPHPKTN- 135 (447)
T ss_pred eccceEEEEEe---e--cceeEEEeccCCCcceeeeECCCcceEeeeeccee-EEEEEEecccee-----EEecccccC-
Confidence 34457777777 2 332 34455556677789999999998876443 344555544322 222222221
Q ss_pred cCCCCCCceeeCCCCCEEEEEEe
Q 011049 92 YSDPGSPMMTRTSTGTNVIAKIK 114 (494)
Q Consensus 92 ~~~~~~~~~~~spDG~~i~~~~~ 114 (494)
...+.+.|||++.+..++
T Consensus 136 -----~kg~~f~~dg~f~ai~sR 153 (447)
T KOG4497|consen 136 -----VKGYAFHPDGQFCAILSR 153 (447)
T ss_pred -----ceeEEECCCCceeeeeec
Confidence 123348999999988764
|
|
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.47 E-value=2.4 Score=42.53 Aligned_cols=142 Identities=12% Similarity=0.076 Sum_probs=74.4
Q ss_pred CccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
+....|.++|+ ...+...+.+...........|+|+|+.|+..+. ++ .+.+-++.++ ++..........
T Consensus 222 s~D~tiriwd~-~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~-D~---tvriWd~~~~--~~~~~l~~hs~~---- 290 (456)
T KOG0266|consen 222 SDDKTLRIWDL-KDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSD-DG---TVRIWDVRTG--ECVRKLKGHSDG---- 290 (456)
T ss_pred cCCceEEEeec-cCCCeEEEEecCCCCceEEEEecCCCCEEEEecC-CC---cEEEEeccCC--eEEEeeeccCCc----
Confidence 34456777777 2222334455555555678899999966555443 22 3444444544 444444332211
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceE---EEEeeCcchhhhheeeeccCC
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKE---RIWESNREKYFETAVALVFGQ 171 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~---~l~~~~~~~~~~~~~~~~s~~ 171 (494)
--.+.+++||..|+-.+ .++ .+.++|+.++... .+...... . ..
T Consensus 291 --is~~~f~~d~~~l~s~s------------------~d~---~i~vwd~~~~~~~~~~~~~~~~~~------~----~~ 337 (456)
T KOG0266|consen 291 --ISGLAFSPDGNLLVSAS------------------YDG---TIRVWDLETGSKLCLKLLSGAENS------A----PV 337 (456)
T ss_pred --eEEEEECCCCCEEEEcC------------------CCc---cEEEEECCCCceeeeecccCCCCC------C----ce
Confidence 11233799999777653 112 3888999988732 22222111 0 11
Q ss_pred CcccccccCcEEEEEEecCCCCCeEEEEEcCCC
Q 011049 172 GEEDINLNQLKILTSKESKTEITQYHILSWPLK 204 (494)
Q Consensus 172 ~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~ 204 (494)
....|+|++..++.... ...+-++++..+
T Consensus 338 ~~~~fsp~~~~ll~~~~----d~~~~~w~l~~~ 366 (456)
T KOG0266|consen 338 TSVQFSPNGKYLLSASL----DRTLKLWDLRSG 366 (456)
T ss_pred eEEEECCCCcEEEEecC----CCeEEEEEccCC
Confidence 23477888876665332 224444555443
|
|
| >KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown] | Back alignment and domain information |
|---|
Probab=92.36 E-value=0.41 Score=46.21 Aligned_cols=86 Identities=8% Similarity=-0.007 Sum_probs=50.7
Q ss_pred CccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
+..|+.+++|. +.....++.......+-.++||||..||..+..+. --||+++.++. ...++-...+. +.
T Consensus 425 t~~G~w~V~d~---e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~--iyiy~Vs~~g~--~y~r~~k~~gs--~i- 494 (626)
T KOG2106|consen 425 TATGRWFVLDT---ETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNH--IYIYRVSANGR--KYSRVGKCSGS--PI- 494 (626)
T ss_pred eccceEEEEec---ccceeEEEEecCCceEEEEEcCCCCEEEEecCCCe--EEEEEECCCCc--EEEEeeeecCc--ee-
Confidence 34678899998 65444455445556667889999999998764322 33444444443 33333333321 00
Q ss_pred CCCCceeeCCCCCEEEEEE
Q 011049 95 PGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~ 113 (494)
.... ||+|++++.-.+
T Consensus 495 -thLD--wS~Ds~~~~~~S 510 (626)
T KOG2106|consen 495 -THLD--WSSDSQFLVSNS 510 (626)
T ss_pred -EEee--ecCCCceEEecc
Confidence 1122 999999876554
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.07 E-value=2.8 Score=40.88 Aligned_cols=80 Identities=8% Similarity=-0.016 Sum_probs=47.5
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
..|||+++ .+...+............+|+|+++.++.++-+. ...+-+.++.+. ..+..+.... ..
T Consensus 255 snLyl~~~---~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~--pa~~s~~~lr~N-----l~~~~Pe~~r----NT 320 (561)
T COG5354 255 SNLYLLRI---TERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYM--PASVSVFDLRGN-----LRFYFPEQKR----NT 320 (561)
T ss_pred ceEEEEee---cccccceeccccccceeeeecccCCceeEEeccc--ccceeecccccc-----eEEecCCccc----cc
Confidence 69999998 4333222222234456789999999999887332 234555555542 2222222110 33
Q ss_pred CceeeCCCCCEEEEEE
Q 011049 98 PMMTRTSTGTNVIAKI 113 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~ 113 (494)
++ +||-+++|++..
T Consensus 321 ~~--fsp~~r~il~ag 334 (561)
T COG5354 321 IF--FSPHERYILFAG 334 (561)
T ss_pred cc--ccCcccEEEEec
Confidence 34 899999998864
|
|
| >KOG2096 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.05 E-value=1.7 Score=39.71 Aligned_cols=67 Identities=19% Similarity=0.279 Sum_probs=36.8
Q ss_pred cccccccceecCCCceEEEEeeeeccceEEEEEcC-CCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEe
Q 011049 39 LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP-GSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 114 (494)
Q Consensus 39 ~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~-~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~ 114 (494)
.....+...||.|||.|+-.+... --+||-++= ... +-|.+-..- .+..|. .+.++||.+.+++...
T Consensus 85 H~~~vt~~~FsSdGK~lat~~~Dr--~Ir~w~~~DF~~~--eHr~~R~nv---e~dhpT--~V~FapDc~s~vv~~~ 152 (420)
T KOG2096|consen 85 HKKEVTDVAFSSDGKKLATISGDR--SIRLWDVRDFENK--EHRCIRQNV---EYDHPT--RVVFAPDCKSVVVSVK 152 (420)
T ss_pred cCCceeeeEEcCCCceeEEEeCCc--eEEEEecchhhhh--hhhHhhccc---cCCCce--EEEECCCcceEEEEEc
Confidence 344566789999999999776422 345665531 111 222221111 111122 3348999998887664
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=91.98 E-value=0.49 Score=42.39 Aligned_cols=40 Identities=20% Similarity=0.303 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 323 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 323 ~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
....++...+..++++. ...+|.++|||+||.+|..++..
T Consensus 109 ~~~~~~~~~~~~~~~~~--p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 109 SLYNQVLPELKSALKQY--PDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred HHHHHHHHHHHHHHhhC--CCceEEEEccCHHHHHHHHHHHH
Confidence 33445555555555442 24689999999999999887765
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=91.88 E-value=13 Score=41.64 Aligned_cols=29 Identities=10% Similarity=-0.091 Sum_probs=21.3
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
+.+|+|||+.|++. +. .+++|++++++++
T Consensus 744 GIavspdG~~LYVA-Ds--~n~~Irv~D~~tg 772 (1057)
T PLN02919 744 GISLSPDLKELYIA-DS--ESSSIRALDLKTG 772 (1057)
T ss_pred EEEEeCCCCEEEEE-EC--CCCeEEEEECCCC
Confidence 46799999987654 32 2468999998865
|
|
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=91.81 E-value=9.5 Score=34.38 Aligned_cols=45 Identities=11% Similarity=-0.006 Sum_probs=34.5
Q ss_pred CCCCccceeeeccCCCCCCCCCeecccccccc-ccceecCCCceEEEEe
Q 011049 12 VEVSPRDIIYTQPAEPAEGEKPEILHKLDLRF-RSVSWCDDSLALVNET 59 (494)
Q Consensus 12 ~~~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~-~~p~wspDg~~i~f~~ 59 (494)
+-.++.+.+.++|+ .+|++++..-+-... -+.++|||.++|+--+
T Consensus 79 lS~swD~~lrlWDl---~~g~~t~~f~GH~~dVlsva~s~dn~qivSGS 124 (315)
T KOG0279|consen 79 LSASWDGTLRLWDL---ATGESTRRFVGHTKDVLSVAFSTDNRQIVSGS 124 (315)
T ss_pred EeccccceEEEEEe---cCCcEEEEEEecCCceEEEEecCCCceeecCC
Confidence 34567788999999 888888776655444 4789999999998655
|
|
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=91.38 E-value=3.8 Score=37.70 Aligned_cols=141 Identities=13% Similarity=0.075 Sum_probs=75.0
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccC-CCCccCCCCchhHHHHHhCCeEEEeCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRG-SPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 310 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g 310 (494)
+++..+..|||.-..... ..+|+.+++.||+..+....+.+.. +|-.... .+.....|-......+. ..-..|
T Consensus 11 r~~a~~F~wly~~~~~~k---s~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~-~~r~~TWlk~adllfvD--nPVGaG 84 (414)
T KOG1283|consen 11 RTGAHMFWWLYYATANVK---SERPLALWLQGGPGASSTGFGNFEELGPLDLDG-SPRDWTWLKDADLLFVD--NPVGAG 84 (414)
T ss_pred ecCceEEEEEeeeccccc---cCCCeeEEecCCCCCCCcCccchhhcCCcccCC-CcCCchhhhhccEEEec--CCCcCc
Confidence 467788899998654322 3389999999998665443332211 0100000 00011112223333332 211122
Q ss_pred CCCCCCC---chhHHHHHHHHHHHHHHHHH-cCCCCCCcEEEEecChHHHHHHHHHHhC------C---CceeEEEeCCC
Q 011049 311 EGDKLPN---DRFVEQLVSSAEAAVEEVVR-RGVADPSRIAVGGHSYGAFMTAHLLAHA------P---HLFCCGIARSG 377 (494)
Q Consensus 311 ~g~~~~~---~~~~~~~~~d~~~~v~~l~~-~~~~d~~ri~i~G~S~GG~~a~~~~~~~------p---~~~~a~v~~~~ 377 (494)
+..-... .....+...|+...++-+.. ++......+.|+..||||-+|..++..- . ..|.++++..+
T Consensus 85 fSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDS 164 (414)
T KOG1283|consen 85 FSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDS 164 (414)
T ss_pred eeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCc
Confidence 2111111 12245667788887765554 3445667899999999999998776532 1 13566666554
Q ss_pred C
Q 011049 378 S 378 (494)
Q Consensus 378 ~ 378 (494)
.
T Consensus 165 W 165 (414)
T KOG1283|consen 165 W 165 (414)
T ss_pred c
Confidence 4
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=91.19 E-value=2.3 Score=43.32 Aligned_cols=136 Identities=9% Similarity=-0.023 Sum_probs=71.4
Q ss_pred CCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
-++++.+-.+|. +..+...-..-+.......++|||++++.++........+-.++.... .....++.....
T Consensus 211 ~ey~~~vSvID~---etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~--d~~vvfni~~ie--- 282 (635)
T PRK02888 211 KKYRSLFTAVDA---ETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAER--DWVVVFNIARIE--- 282 (635)
T ss_pred cceeEEEEEEEC---ccceEEEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeeccccC--ceEEEEchHHHH---
Confidence 567777777777 433322111122233455799999997766532222445666665433 333334333222
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCC----C-ceEE-EEeeCcchhhhheeee
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINT----G-SKER-IWESNREKYFETAVAL 167 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~----g-~~~~-l~~~~~~~~~~~~~~~ 167 (494)
. +.+||++..+.. .++.++|..+ + +... +..+...
T Consensus 283 --a-----~vkdGK~~~V~g-----------------------n~V~VID~~t~~~~~~~v~~yIPVGKsP--------- 323 (635)
T PRK02888 283 --E-----AVKAGKFKTIGG-----------------------SKVPVVDGRKAANAGSALTRYVPVPKNP--------- 323 (635)
T ss_pred --H-----hhhCCCEEEECC-----------------------CEEEEEECCccccCCcceEEEEECCCCc---------
Confidence 1 578888655421 1366777665 2 1111 2211111
Q ss_pred ccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 168 VFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 168 ~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
....+||||++++++.. ..+.+-++|...
T Consensus 324 ----HGV~vSPDGkylyVank---lS~tVSVIDv~k 352 (635)
T PRK02888 324 ----HGVNTSPDGKYFIANGK---LSPTVTVIDVRK 352 (635)
T ss_pred ----cceEECCCCCEEEEeCC---CCCcEEEEEChh
Confidence 23488999998876432 234566777654
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=91.15 E-value=0.44 Score=45.23 Aligned_cols=40 Identities=15% Similarity=0.263 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 325 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
.+.+.+.|..++++..-.+.+|.|+|||+||.+|..++..
T Consensus 181 r~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 181 QEMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 3445555666665532223479999999999999887764
|
|
| >KOG1273 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.03 E-value=5.4 Score=36.52 Aligned_cols=56 Identities=11% Similarity=0.025 Sum_probs=35.6
Q ss_pred CccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
+..|+|-++|..++. -.+.|+..--...+.+||+||+.|+-++ + ...+-.-|+-.|
T Consensus 42 c~nG~vvI~D~~T~~--iar~lsaH~~pi~sl~WS~dgr~LltsS-~---D~si~lwDl~~g 97 (405)
T KOG1273|consen 42 CANGRVVIYDFDTFR--IARMLSAHVRPITSLCWSRDGRKLLTSS-R---DWSIKLWDLLKG 97 (405)
T ss_pred ccCCcEEEEEccccc--hhhhhhccccceeEEEecCCCCEeeeec-C---CceeEEEeccCC
Confidence 455677788873332 3344666655667889999999877654 2 334555566655
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=90.60 E-value=0.53 Score=48.41 Aligned_cols=52 Identities=13% Similarity=0.164 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHcC----CCC---CCcEEEEecChHHHHHHHHHHhCCCceeEEE
Q 011049 321 VEQLVSSAEAAVEEVVRRG----VAD---PSRIAVGGHSYGAFMTAHLLAHAPHLFCCGI 373 (494)
Q Consensus 321 ~~~~~~d~~~~v~~l~~~~----~~d---~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v 373 (494)
..+..+-+..||.++.+.. .-+ |..|.++||||||.+|..+++. |+..+..|
T Consensus 152 l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tl-kn~~~~sV 210 (973)
T KOG3724|consen 152 LLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTL-KNEVQGSV 210 (973)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhh-hhhccchh
Confidence 3444556666777776542 123 6679999999999999877665 44444443
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=90.51 E-value=0.61 Score=45.03 Aligned_cols=40 Identities=20% Similarity=0.225 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 325 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
.+++.+.|..++++..-..-+|.|+|||+||.+|..+|..
T Consensus 207 r~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 207 RDQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 3445555555555432112369999999999999887764
|
|
| >KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=90.02 E-value=9.9 Score=34.09 Aligned_cols=98 Identities=13% Similarity=0.061 Sum_probs=54.2
Q ss_pred eeccCCCCCCCCCeeccccccccccceecCCCceEEEEeee-eccceEEEEEcCCCCC-----CCceEeeecccccccCC
Q 011049 21 YTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY-KTSQTRTWLVCPGSKD-----VAPRVLFDRVFENVYSD 94 (494)
Q Consensus 21 ~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~-~~~~~~~~~~~~~~g~-----~~~~~lt~~~~~~~~~~ 94 (494)
-|||+ +.|+....-+.+...-...||++|..++++++. .+....|-+.++...+ .++......+...
T Consensus 77 kLWDv---~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~sk---- 149 (327)
T KOG0643|consen 77 KLWDV---ETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSK---- 149 (327)
T ss_pred EEEEc---CCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccc----
Confidence 45555 555544443443334455699999999999863 3335666666665221 1221111111110
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCc
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS 148 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~ 148 (494)
+. ...|+|-|+.|+..-. .+. |-.+|+.+|+
T Consensus 150 it--~a~Wg~l~~~ii~Ghe------------------~G~---is~~da~~g~ 180 (327)
T KOG0643|consen 150 IT--SALWGPLGETIIAGHE------------------DGS---ISIYDARTGK 180 (327)
T ss_pred ee--eeeecccCCEEEEecC------------------CCc---EEEEEcccCc
Confidence 11 2239999998887531 222 8888988875
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=89.96 E-value=0.72 Score=44.46 Aligned_cols=40 Identities=20% Similarity=0.265 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 325 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
.+.+.+.|..|+++..-..-+|.|+|||+||.+|..+|..
T Consensus 196 reqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 196 QEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3445555666666532112479999999999999887753
|
|
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.86 E-value=5.9 Score=35.08 Aligned_cols=88 Identities=10% Similarity=-0.022 Sum_probs=46.9
Q ss_pred ccceeeeccCCCCCCC-CCeeccccc-cccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 16 PRDIIYTQPAEPAEGE-KPEILHKLD-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~-~~~~lt~~~-~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
..|+|+++|+ ... -..+|...+ ....+.+--|||+.++-..+++ +--+|.+.-...-.+...++......
T Consensus 144 qsg~irvWDl---~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG--~cyvW~l~~~~~~s~l~P~~k~~ah~--- 215 (311)
T KOG0315|consen 144 QSGNIRVWDL---GENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKG--NCYVWRLLNHQTASELEPVHKFQAHN--- 215 (311)
T ss_pred CCCcEEEEEc---cCCccccccCCCCCcceeeEEEcCCCcEEEEecCCc--cEEEEEccCCCccccceEhhheeccc---
Confidence 3568899998 333 223444433 3445788899999987654332 34455554322111222333322222
Q ss_pred CCCCCc-eeeCCCCCEEEEEE
Q 011049 94 DPGSPM-MTRTSTGTNVIAKI 113 (494)
Q Consensus 94 ~~~~~~-~~~spDG~~i~~~~ 113 (494)
+... -.+|||+++|+-.+
T Consensus 216 --~~il~C~lSPd~k~lat~s 234 (311)
T KOG0315|consen 216 --GHILRCLLSPDVKYLATCS 234 (311)
T ss_pred --ceEEEEEECCCCcEEEeec
Confidence 1111 12799999998765
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=89.29 E-value=3.5 Score=38.07 Aligned_cols=35 Identities=11% Similarity=0.153 Sum_probs=29.2
Q ss_pred CcEEEEecChHHHHHHHHHHhCCC--ceeEEEeCCCC
Q 011049 344 SRIAVGGHSYGAFMTAHLLAHAPH--LFCCGIARSGS 378 (494)
Q Consensus 344 ~ri~i~G~S~GG~~a~~~~~~~p~--~~~a~v~~~~~ 378 (494)
+-+-++|+|.||.+.-.++.+.|+ .++-.|++++.
T Consensus 95 ~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 95 EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 458899999999999999999876 47888877654
|
|
| >KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown] | Back alignment and domain information |
|---|
Probab=89.26 E-value=5.7 Score=37.15 Aligned_cols=86 Identities=9% Similarity=-0.113 Sum_probs=48.6
Q ss_pred CccceeeeccCCCCCCCCCee--ccccccc--cccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc
Q 011049 15 SPRDIIYTQPAEPAEGEKPEI--LHKLDLR--FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN 90 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~--lt~~~~~--~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~ 90 (494)
.-.+.||+.|+ ...+.-. .|..+.. ....+.++++.+++|-...+ ..+|++.|+..= +.++.-+..+
T Consensus 103 ~Lee~IyIydI---~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t--~GdV~l~d~~nl----~~v~~I~aH~ 173 (391)
T KOG2110|consen 103 CLEESIYIYDI---KDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTT--SGDVVLFDTINL----QPVNTINAHK 173 (391)
T ss_pred EEcccEEEEec---ccceeehhhhccCCCccceEeeccCCCCceEEecCCCC--CceEEEEEcccc----eeeeEEEecC
Confidence 34567999998 5444321 1221222 23344555677999976543 578999988743 3333333222
Q ss_pred ccCCCCCCceeeCCCCCEEEEEE
Q 011049 91 VYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 91 ~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
. .-..+.+||||..||-.+
T Consensus 174 ~----~lAalafs~~G~llATAS 192 (391)
T KOG2110|consen 174 G----PLAALAFSPDGTLLATAS 192 (391)
T ss_pred C----ceeEEEECCCCCEEEEec
Confidence 0 011234899999888765
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=89.00 E-value=0.81 Score=38.90 Aligned_cols=66 Identities=21% Similarity=0.287 Sum_probs=47.0
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC-CcEEEEEcCCCCCc--cCCcccHHHHHHHHHHHHHHh
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHG-ALSRLVLLPFEHHV--YAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g-~~~~~~~~~~~~H~--~~~~~~~~~~~~~~~~fl~~~ 482 (494)
++++|-+-|++|.++. +.|+..-........ .....++.+++||. |....-+...+..+.+|+.+|
T Consensus 134 ~taLlTVEGe~DDIsg--~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISG--PGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCc--chHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 4889999999999987 888765555444322 12356778899997 555555567888889998764
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=88.87 E-value=0.82 Score=45.09 Aligned_cols=39 Identities=23% Similarity=0.308 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 326 SSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 326 ~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
+++.+.|..+++...-..-+|.|+|||+||.+|..++..
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 455566666665432122479999999999999877653
|
|
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=87.89 E-value=4.6 Score=41.44 Aligned_cols=64 Identities=11% Similarity=0.139 Sum_probs=39.6
Q ss_pred ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEE
Q 011049 36 LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAK 112 (494)
Q Consensus 36 lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~ 112 (494)
|....++.+...|+|||.++.+.. +++|-+.|+.... +.+...+..+.. .. +..||||+.++..
T Consensus 10 llGTvyr~Gnl~ft~dG~sviSPv-----GNrvsv~dLknN~-S~Tl~~e~~~NI-----~~--ialSp~g~lllav 73 (893)
T KOG0291|consen 10 LLGTVYRAGNLVFTKDGNSVISPV-----GNRVSVFDLKNNK-SYTLPLETRYNI-----TR--IALSPDGTLLLAV 73 (893)
T ss_pred cccceeecCcEEECCCCCEEEecc-----CCEEEEEEccCCc-ceeEEeecCCce-----EE--EEeCCCceEEEEE
Confidence 334456677889999999988753 6788888887541 222222222211 12 2279999877655
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.40 E-value=2.9 Score=41.16 Aligned_cols=106 Identities=16% Similarity=0.079 Sum_probs=51.6
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCcc----CCCCchhHHHHHhCCeEEEeCCCCCCCCCCCC---CCCchhHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEF----SGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK---LPNDRFVEQLVSS 327 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~---~~~~~~~~~~~~d 327 (494)
.|+|+++-|||.++.-.....--+|.+. .+........|...+=.|+. |..-..|+..+ +....+ ...-.|
T Consensus 101 rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFi-DqPvGTGfS~a~~~e~~~d~-~~~~~D 178 (498)
T COG2939 101 RPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFI-DQPVGTGFSRALGDEKKKDF-EGAGKD 178 (498)
T ss_pred CceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEE-ecCcccCcccccccccccch-hccchh
Confidence 8999999999855432111111122111 11111123355666666665 21112344432 111111 222334
Q ss_pred HHHHH----HHHHHcCCCCCCcEEEEecChHHHHHHHHHH
Q 011049 328 AEAAV----EEVVRRGVADPSRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 328 ~~~~v----~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~ 363 (494)
+..+. +++.+... .-.+..|+|.||||+-+..+|.
T Consensus 179 ~~~~~~~f~~~fp~~~r-~~~~~~L~GESYgg~yip~~A~ 217 (498)
T COG2939 179 VYSFLRLFFDKFPHYAR-LLSPKFLAGESYGGHYIPVFAH 217 (498)
T ss_pred HHHHHHHHHHHHHHHhh-hcCceeEeeccccchhhHHHHH
Confidence 44443 44444332 1247899999999987766654
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=87.09 E-value=6.3 Score=36.51 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=29.7
Q ss_pred CcEEEEecChHHHHHHHHHHhCCC--ceeEEEeCCCC
Q 011049 344 SRIAVGGHSYGAFMTAHLLAHAPH--LFCCGIARSGS 378 (494)
Q Consensus 344 ~ri~i~G~S~GG~~a~~~~~~~p~--~~~a~v~~~~~ 378 (494)
+-+-++|+|.||.++-.++.+.|+ .++-.|++++.
T Consensus 94 ~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 94 QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 458999999999999999999986 47888887654
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=86.80 E-value=1.3 Score=43.41 Aligned_cols=35 Identities=20% Similarity=0.363 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHH
Q 011049 327 SAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 327 d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~ 363 (494)
.+...++.++++. ...+|.|+|||+||.+|..+++
T Consensus 269 ~i~~~Lk~ll~~~--p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQN--PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHC--CCCeEEEEecCHHHHHHHHHHH
Confidence 3444555555442 2357999999999999998774
|
|
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=86.65 E-value=33 Score=33.44 Aligned_cols=128 Identities=9% Similarity=0.027 Sum_probs=69.0
Q ss_pred ccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccce
Q 011049 42 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 121 (494)
Q Consensus 42 ~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~ 121 (494)
.-...+|+|||+.++..-.... ...+++++..+. +.+...+... .|.. +..+|||.+++....
T Consensus 117 ~P~~~~~~~~~~~vYV~n~~~~-~~~vsvid~~t~----~~~~~~~vG~---~P~~--~a~~p~g~~vyv~~~------- 179 (381)
T COG3391 117 GPVGLAVDPDGKYVYVANAGNG-NNTVSVIDAATN----KVTATIPVGN---TPTG--VAVDPDGNKVYVTNS------- 179 (381)
T ss_pred CCceEEECCCCCEEEEEecccC-CceEEEEeCCCC----eEEEEEecCC---Ccce--EEECCCCCeEEEEec-------
Confidence 3446789999998766533222 578999988765 2222222221 1222 227999998876541
Q ss_pred EEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEc
Q 011049 122 YILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSW 201 (494)
Q Consensus 122 ~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~ 201 (494)
....+..+|.++....+ ...... ......-....+++||.++++...... -..+..++.
T Consensus 180 -------------~~~~v~vi~~~~~~v~~-~~~~~~------~~~~~~P~~i~v~~~g~~~yV~~~~~~-~~~v~~id~ 238 (381)
T COG3391 180 -------------DDNTVSVIDTSGNSVVR-GSVGSL------VGVGTGPAGIAVDPDGNRVYVANDGSG-SNNVLKIDT 238 (381)
T ss_pred -------------CCCeEEEEeCCCcceec-cccccc------cccCCCCceEEECCCCCEEEEEeccCC-CceEEEEeC
Confidence 11137778866654433 222111 000011112377888887766554322 245777776
Q ss_pred CCCcee
Q 011049 202 PLKKSS 207 (494)
Q Consensus 202 ~~~~~~ 207 (494)
.++...
T Consensus 239 ~~~~v~ 244 (381)
T COG3391 239 ATGNVT 244 (381)
T ss_pred CCceEE
Confidence 665543
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=86.58 E-value=1.4 Score=43.77 Aligned_cols=39 Identities=23% Similarity=0.214 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHcCCCC---CCcEEEEecChHHHHHHHHHH
Q 011049 325 VSSAEAAVEEVVRRGVAD---PSRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~~d---~~ri~i~G~S~GG~~a~~~~~ 363 (494)
.+.+.+.|+.|+++..-+ .-+|.|+|||.||.+|..+|.
T Consensus 290 reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 290 REQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 445556666666543211 358999999999999988875
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=86.46 E-value=1.3 Score=42.81 Aligned_cols=21 Identities=24% Similarity=0.294 Sum_probs=18.0
Q ss_pred CcEEEEecChHHHHHHHHHHh
Q 011049 344 SRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 344 ~ri~i~G~S~GG~~a~~~~~~ 364 (494)
.+|.|+|||+||.+|..++..
T Consensus 209 ~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHH
Confidence 479999999999999877743
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=86.20 E-value=1.5 Score=43.52 Aligned_cols=39 Identities=26% Similarity=0.171 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHcCC---CC-CCcEEEEecChHHHHHHHHHH
Q 011049 325 VSSAEAAVEEVVRRGV---AD-PSRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~---~d-~~ri~i~G~S~GG~~a~~~~~ 363 (494)
.+++.+.|..|++... -+ .-+|.|+|||+||.+|..+|.
T Consensus 271 R~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 271 REQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 3445556666655431 12 247999999999999987774
|
|
| >KOG1274 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.19 E-value=11 Score=39.68 Aligned_cols=92 Identities=9% Similarity=0.053 Sum_probs=51.6
Q ss_pred CCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCC--ceeeCCCCC
Q 011049 30 GEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP--MMTRTSTGT 107 (494)
Q Consensus 30 ~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~--~~~~spDG~ 107 (494)
....+.+-..++......+.|.|+.||.++ . ++.|++.+++.+. ....++.-.....+.. ..+ ...|+|+|.
T Consensus 128 ~s~~~~lrgh~apVl~l~~~p~~~fLAvss---~-dG~v~iw~~~~~~-~~~tl~~v~k~n~~~~-s~i~~~~aW~Pk~g 201 (933)
T KOG1274|consen 128 SSQEKVLRGHDAPVLQLSYDPKGNFLAVSS---C-DGKVQIWDLQDGI-LSKTLTGVDKDNEFIL-SRICTRLAWHPKGG 201 (933)
T ss_pred cchheeecccCCceeeeeEcCCCCEEEEEe---c-CceEEEEEcccch-hhhhcccCCccccccc-cceeeeeeecCCCC
Confidence 344455556667777889999999888765 2 5578888887651 2233333222221110 111 123999965
Q ss_pred EEEEEEeccCccceEEEEccCCCC
Q 011049 108 NVIAKIKKENDEQIYILLNGRGFT 131 (494)
Q Consensus 108 ~i~~~~~~~~~~~~~~~~~~~g~~ 131 (494)
.+++-.. ++.+.+|+.+|+.
T Consensus 202 ~la~~~~----d~~Vkvy~r~~we 221 (933)
T KOG1274|consen 202 TLAVPPV----DNTVKVYSRKGWE 221 (933)
T ss_pred eEEeecc----CCeEEEEccCCce
Confidence 5555432 3444455555554
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=86.14 E-value=1.2 Score=44.14 Aligned_cols=20 Identities=20% Similarity=0.297 Sum_probs=17.6
Q ss_pred CcEEEEecChHHHHHHHHHH
Q 011049 344 SRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 344 ~ri~i~G~S~GG~~a~~~~~ 363 (494)
-+|.|+|||+||.+|..+|.
T Consensus 318 ~SItVTGHSLGGALAtLaA~ 337 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAY 337 (525)
T ss_pred ceEEEeccCHHHHHHHHHHH
Confidence 47999999999999987774
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=86.12 E-value=6.4 Score=34.09 Aligned_cols=34 Identities=15% Similarity=0.117 Sum_probs=24.8
Q ss_pred CCcEEEEecChHHHHHHHHHHh---CCCceeEEEeCC
Q 011049 343 PSRIAVGGHSYGAFMTAHLLAH---APHLFCCGIARS 376 (494)
Q Consensus 343 ~~ri~i~G~S~GG~~a~~~~~~---~p~~~~a~v~~~ 376 (494)
..++.++|||+||.++..++.+ .+..+..++...
T Consensus 63 ~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~ 99 (212)
T smart00824 63 GRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLD 99 (212)
T ss_pred CCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEc
Confidence 3578999999999999888775 334555555443
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >KOG1539 consensus WD repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.03 E-value=1.4 Score=45.44 Aligned_cols=80 Identities=10% Similarity=-0.010 Sum_probs=46.5
Q ss_pred eeeeccCCCCCCCCCeeccc-cccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 19 IIYTQPAEPAEGEKPEILHK-LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~-~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
.|.++|. .+.+..|... ...+....+||||||||+-.+.. ..|.+-|+-++..-.-.+++.+ -
T Consensus 557 ~I~vvD~---~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD----~tIr~wDlpt~~lID~~~vd~~---------~ 620 (910)
T KOG1539|consen 557 SIRVVDV---VTRKVVREFWGHGNRITDMTFSPDGRWLISASMD----STIRTWDLPTGTLIDGLLVDSP---------C 620 (910)
T ss_pred eEEEEEc---hhhhhhHHhhccccceeeeEeCCCCcEEEEeecC----CcEEEEeccCcceeeeEecCCc---------c
Confidence 5667776 4445444443 44577788999999999977633 2344455554411111122111 1
Q ss_pred CceeeCCCCCEEEEEEe
Q 011049 98 PMMTRTSTGTNVIAKIK 114 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~~ 114 (494)
-.+.+||.|.+++-...
T Consensus 621 ~sls~SPngD~LAT~Hv 637 (910)
T KOG1539|consen 621 TSLSFSPNGDFLATVHV 637 (910)
T ss_pred eeeEECCCCCEEEEEEe
Confidence 12338999999988753
|
|
| >KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=85.92 E-value=6.2 Score=39.67 Aligned_cols=67 Identities=9% Similarity=0.081 Sum_probs=32.7
Q ss_pred ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEE
Q 011049 36 LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 36 lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
||.+...+...+|-|=-.-++-++.++. --+||-+ ..+. ..-++..... +-+-+.|||||++++-.-
T Consensus 673 lt~h~eKI~slRfHPLAadvLa~asyd~-Ti~lWDl--~~~~-~~~~l~gHtd-------qIf~~AWSpdGr~~AtVc 739 (1012)
T KOG1445|consen 673 LTIHGEKITSLRFHPLAADVLAVASYDS-TIELWDL--ANAK-LYSRLVGHTD-------QIFGIAWSPDGRRIATVC 739 (1012)
T ss_pred eecccceEEEEEecchhhhHhhhhhccc-eeeeeeh--hhhh-hhheeccCcC-------ceeEEEECCCCcceeeee
Confidence 4555555566777774433333333433 3455544 4331 1112222211 112234999999998664
|
|
| >KOG1520 consensus Predicted alkaloid synthase/Surface mucin Hemomucin [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.56 E-value=8 Score=36.72 Aligned_cols=129 Identities=15% Similarity=0.145 Sum_probs=64.4
Q ss_pred ceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccce-EEE
Q 011049 46 VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI-YIL 124 (494)
Q Consensus 46 p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~-~~~ 124 (494)
.+|..-|..++.. + . .--|+.++.+++ .++.++++......-..+... ..|+| .|+|+.+....... .++
T Consensus 120 l~f~~~ggdL~Va-D--A-YlGL~~V~p~g~--~a~~l~~~~~G~~~kf~N~ld--I~~~g-~vyFTDSSsk~~~rd~~~ 190 (376)
T KOG1520|consen 120 IRFDKKGGDLYVA-D--A-YLGLLKVGPEGG--LAELLADEAEGKPFKFLNDLD--IDPEG-VVYFTDSSSKYDRRDFVF 190 (376)
T ss_pred EEeccCCCeEEEE-e--c-ceeeEEECCCCC--cceeccccccCeeeeecCcee--EcCCC-eEEEeccccccchhheEE
Confidence 4577766554433 3 1 234888888887 566666554321111112222 35645 46776543222222 222
Q ss_pred EccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEE
Q 011049 125 LNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHIL 199 (494)
Q Consensus 125 ~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~ 199 (494)
.-..| .+.+ ++.++|..+++.+.|-..- +| .+...+|+|+..+++...+...-..+|+-
T Consensus 191 a~l~g-~~~G---Rl~~YD~~tK~~~VLld~L---~F---------~NGlaLS~d~sfvl~~Et~~~ri~rywi~ 249 (376)
T KOG1520|consen 191 AALEG-DPTG---RLFRYDPSTKVTKVLLDGL---YF---------PNGLALSPDGSFVLVAETTTARIKRYWIK 249 (376)
T ss_pred eeecC-CCcc---ceEEecCcccchhhhhhcc---cc---------cccccCCCCCCEEEEEeeccceeeeeEec
Confidence 11222 1223 3888998887654443211 11 23348899998777755443333445543
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=85.38 E-value=1.7 Score=42.44 Aligned_cols=36 Identities=19% Similarity=0.305 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHH
Q 011049 326 SSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 326 ~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~ 363 (494)
..+...++.+.++. ...++.++|||.||.+|..+++
T Consensus 262 ~~I~~~L~~lL~k~--p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 262 YTIRQMLRDKLARN--KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHhC--CCceEEEEecChHHHHHHHHHH
Confidence 34444554444432 2368999999999999988654
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=85.22 E-value=1.7 Score=42.92 Aligned_cols=36 Identities=14% Similarity=0.337 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHH
Q 011049 326 SSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 326 ~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~ 363 (494)
..+...++.+.++. ...+|.++|||.||.+|..+++
T Consensus 305 ~~v~~~lk~ll~~~--p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEH--KNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHC--CCCeEEEeccccHHHHHHHHHH
Confidence 34556666666553 1358999999999999988864
|
|
| >KOG0645 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.20 E-value=6.7 Score=35.15 Aligned_cols=62 Identities=13% Similarity=0.141 Sum_probs=37.2
Q ss_pred cccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEe
Q 011049 43 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 114 (494)
Q Consensus 43 ~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~ 114 (494)
..+.+|||.|+.|+-.+...+ .-||.-. ++ +-+.+..-++.++. ---+.||++|.+||-.++
T Consensus 64 VRsvAwsp~g~~La~aSFD~t--~~Iw~k~--~~--efecv~~lEGHEnE----VK~Vaws~sG~~LATCSR 125 (312)
T KOG0645|consen 64 VRSVAWSPHGRYLASASFDAT--VVIWKKE--DG--EFECVATLEGHENE----VKCVAWSASGNYLATCSR 125 (312)
T ss_pred eeeeeecCCCcEEEEeeccce--EEEeecC--CC--ceeEEeeeeccccc----eeEEEEcCCCCEEEEeeC
Confidence 346789999998886654322 3344332 33 44555554444421 112349999999998763
|
|
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=84.73 E-value=24 Score=36.46 Aligned_cols=44 Identities=14% Similarity=0.088 Sum_probs=30.1
Q ss_pred CCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCC
Q 011049 29 EGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPG 74 (494)
Q Consensus 29 ~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~ 74 (494)
+++..+.|....+...+-+||||-+.|+-.|. +. .-++|-++.-
T Consensus 440 ~~~~~~~L~GH~GPVyg~sFsPd~rfLlScSE-D~-svRLWsl~t~ 483 (707)
T KOG0263|consen 440 SSGTSRTLYGHSGPVYGCSFSPDRRFLLSCSE-DS-SVRLWSLDTW 483 (707)
T ss_pred CCceeEEeecCCCceeeeeecccccceeeccC-Cc-ceeeeecccc
Confidence 44566667776666667789999998776553 22 4678887643
|
|
| >KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.32 E-value=4.4 Score=37.05 Aligned_cols=81 Identities=12% Similarity=0.072 Sum_probs=44.6
Q ss_pred ceeeeccCCCCCCCCCee-cc-ccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 18 DIIYTQPAEPAEGEKPEI-LH-KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~-lt-~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
|.|-+|.+ .+|..-+ .- .........+||.|+..|+-.+.. .-+-+.-+..| +.|.+..+...|.
T Consensus 285 GkIKvWri---~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD----~tvRiHGlKSG----K~LKEfrGHsSyv-- 351 (508)
T KOG0275|consen 285 GKIKVWRI---ETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFD----QTVRIHGLKSG----KCLKEFRGHSSYV-- 351 (508)
T ss_pred CcEEEEEE---ecchHHHHhhhhhccCeeEEEEccCcchhhccccc----ceEEEeccccc----hhHHHhcCccccc--
Confidence 45555555 4454322 22 111224567899999998865421 22444555655 5666655543332
Q ss_pred CCCceeeCCCCCEEEEEE
Q 011049 96 GSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~ 113 (494)
.... +++||.+|+-.+
T Consensus 352 n~a~--ft~dG~~iisaS 367 (508)
T KOG0275|consen 352 NEAT--FTDDGHHIISAS 367 (508)
T ss_pred cceE--EcCCCCeEEEec
Confidence 2223 788998887655
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=84.22 E-value=26 Score=39.30 Aligned_cols=81 Identities=11% Similarity=0.106 Sum_probs=43.5
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccc-----------cccCCCCCCceeeCCCCCEEEEEE
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFE-----------NVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~-----------~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
..+++|++..|+++ .. .+.+||+++..++ ..+.+. ..+. ..+..|.. +.++|||++|++..
T Consensus 687 gVa~dp~~g~LyVa-d~--~~~~I~v~d~~~g--~v~~~~-G~G~~~~~~g~~~~~~~~~~P~G--IavspdG~~LYVAD 758 (1057)
T PLN02919 687 DVCFEPVNEKVYIA-MA--GQHQIWEYNISDG--VTRVFS-GDGYERNLNGSSGTSTSFAQPSG--ISLSPDLKELYIAD 758 (1057)
T ss_pred EEEEecCCCeEEEE-EC--CCCeEEEEECCCC--eEEEEe-cCCccccCCCCccccccccCccE--EEEeCCCCEEEEEE
Confidence 35788876655543 32 2568999988765 222211 1110 00111222 34789998776653
Q ss_pred eccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEE
Q 011049 114 KKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIW 153 (494)
Q Consensus 114 ~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~ 153 (494)
. ....|.++|++++....+.
T Consensus 759 s--------------------~n~~Irv~D~~tg~~~~~~ 778 (1057)
T PLN02919 759 S--------------------ESSSIRALDLKTGGSRLLA 778 (1057)
T ss_pred C--------------------CCCeEEEEECCCCcEEEEE
Confidence 2 1124888888877654443
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.95 E-value=4.5 Score=39.47 Aligned_cols=45 Identities=16% Similarity=0.254 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC
Q 011049 321 VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 367 (494)
Q Consensus 321 ~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~ 367 (494)
.++....+..-++.+.+.. ..++|.|++|||||.+..+.+..+++
T Consensus 161 rd~yl~kLK~~iE~~~~~~--G~kkVvlisHSMG~l~~lyFl~w~~~ 205 (473)
T KOG2369|consen 161 RDQYLSKLKKKIETMYKLN--GGKKVVLISHSMGGLYVLYFLKWVEA 205 (473)
T ss_pred HHHHHHHHHHHHHHHHHHc--CCCceEEEecCCccHHHHHHHhcccc
Confidence 3445666667777666542 13899999999999999999988866
|
|
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=83.45 E-value=11 Score=36.02 Aligned_cols=54 Identities=15% Similarity=0.100 Sum_probs=34.9
Q ss_pred CCccceeeeccCCCCCCCC-CeeccccccccccceecCCCceEEEEeeeeccceEEEEEc
Q 011049 14 VSPRDIIYTQPAEPAEGEK-PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVC 72 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~-~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~ 72 (494)
-+..|.+=++++ ++.. ...|+....+.+..+|-|+|+.|+-.+. +. --++|-+.
T Consensus 237 ~s~Dgtvklw~~---~~e~~l~~l~gH~~RVs~VafHPsG~~L~Tasf-D~-tWRlWD~~ 291 (459)
T KOG0272|consen 237 ASADGTVKLWKL---SQETPLQDLEGHLARVSRVAFHPSGKFLGTASF-DS-TWRLWDLE 291 (459)
T ss_pred eccCCceeeecc---CCCcchhhhhcchhhheeeeecCCCceeeeccc-cc-chhhcccc
Confidence 345556666666 4433 3457777788889999999999886553 22 34566443
|
|
| >KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.39 E-value=6 Score=36.38 Aligned_cols=33 Identities=9% Similarity=0.174 Sum_probs=23.9
Q ss_pred ccccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 42 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 42 ~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
..-+-.|||||.-|+-.+..+. -.+|-++.+..
T Consensus 51 f~kgckWSPDGSciL~~sedn~--l~~~nlP~dly 83 (406)
T KOG2919|consen 51 FLKGCKWSPDGSCILSLSEDNC--LNCWNLPFDLY 83 (406)
T ss_pred hhccceeCCCCceEEeecccCe--eeEEecChhhc
Confidence 3446689999999988765544 67888877654
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=83.22 E-value=2.4 Score=41.95 Aligned_cols=39 Identities=23% Similarity=0.228 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHcCCC---CCCcEEEEecChHHHHHHHHHH
Q 011049 325 VSSAEAAVEEVVRRGVA---DPSRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~~---d~~ri~i~G~S~GG~~a~~~~~ 363 (494)
.+++.+.|..|+++..- ..-+|.|+|||+||.+|..+|.
T Consensus 276 ReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 276 REQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 44555666666654321 1247999999999999988774
|
|
| >KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=83.00 E-value=3.5 Score=43.79 Aligned_cols=92 Identities=12% Similarity=0.071 Sum_probs=47.6
Q ss_pred CCCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc-c
Q 011049 13 EVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN-V 91 (494)
Q Consensus 13 ~~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~-~ 91 (494)
-.+..+.|-+++.-++ ...+++-....-.-+.+|-|=||+|+-.++.. --.+|... +-+ -.+.+|...... .
T Consensus 146 S~s~DnsViiwn~~tF--~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDr--tikvwrt~-dw~--i~k~It~pf~~~~~ 218 (942)
T KOG0973|consen 146 SVSLDNSVIIWNAKTF--ELLKVLRGHQSLVKGVSWDPIGKYFASQSDDR--TLKVWRTS-DWG--IEKSITKPFEESPL 218 (942)
T ss_pred EecccceEEEEccccc--eeeeeeecccccccceEECCccCeeeeecCCc--eEEEEEcc-cce--eeEeeccchhhCCC
Confidence 3455556666666222 22223322323334678999999888765432 45777743 122 334454432211 0
Q ss_pred cCCCCCCceeeCCCCCEEEEEE
Q 011049 92 YSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 92 ~~~~~~~~~~~spDG~~i~~~~ 113 (494)
+.....+. |||||++|+...
T Consensus 219 ~T~f~RlS--WSPDG~~las~n 238 (942)
T KOG0973|consen 219 TTFFLRLS--WSPDGHHLASPN 238 (942)
T ss_pred cceeeecc--cCCCcCeecchh
Confidence 00112223 999999997644
|
|
| >KOG2096 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.77 E-value=15 Score=33.80 Aligned_cols=87 Identities=7% Similarity=0.008 Sum_probs=45.9
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEc--CCCCCCCceEeeecccccccCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVC--PGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~--~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
..|-|+++ .|.....+-.....+..-+-||||+.|+..... ..-.+|-+- -+|.=.+.++++.-.+..-
T Consensus 209 t~i~lw~l---kGq~L~~idtnq~~n~~aavSP~GRFia~~gFT--pDVkVwE~~f~kdG~fqev~rvf~LkGH~s---- 279 (420)
T KOG2096|consen 209 TKICLWDL---KGQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFT--PDVKVWEPIFTKDGTFQEVKRVFSLKGHQS---- 279 (420)
T ss_pred CcEEEEec---CCceeeeeccccccccceeeCCCCcEEEEecCC--CCceEEEEEeccCcchhhhhhhheeccchh----
Confidence 36677777 543333343444455667899999998865421 122333221 1222235555555554321
Q ss_pred CCCceeeCCCCCEEEEEE
Q 011049 96 GSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~ 113 (494)
+--..++||+.++++-.+
T Consensus 280 aV~~~aFsn~S~r~vtvS 297 (420)
T KOG2096|consen 280 AVLAAAFSNSSTRAVTVS 297 (420)
T ss_pred heeeeeeCCCcceeEEEe
Confidence 111234788887776654
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=82.67 E-value=2.9 Score=35.70 Aligned_cols=54 Identities=19% Similarity=0.199 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh--C----CCceeEEEeCCC
Q 011049 322 EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH--A----PHLFCCGIARSG 377 (494)
Q Consensus 322 ~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~--~----p~~~~a~v~~~~ 377 (494)
...+.++...++...++- -..+|+|+|+|.|+.++..++.. . .+++++++++.-
T Consensus 61 ~~G~~~~~~~i~~~~~~C--P~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGd 120 (179)
T PF01083_consen 61 AAGVANLVRLIEEYAARC--PNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGD 120 (179)
T ss_dssp HHHHHHHHHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-
T ss_pred HHHHHHHHHHHHHHHHhC--CCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecC
Confidence 344566666665555542 13699999999999999999887 2 246778777654
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=82.59 E-value=4 Score=41.83 Aligned_cols=109 Identities=15% Similarity=0.157 Sum_probs=63.1
Q ss_pred CCCeecccccccccc-ceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCC--ceeeCCCCC
Q 011049 31 EKPEILHKLDLRFRS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP--MMTRTSTGT 107 (494)
Q Consensus 31 ~~~~~lt~~~~~~~~-p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~--~~~~spDG~ 107 (494)
..|.|+..+...+-. .+|-|.+.+++--+.. +--++|-+.. | ...+++... ..| .+++||+|+
T Consensus 525 ~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD--~tVRlWDv~~--G--~~VRiF~GH--------~~~V~al~~Sp~Gr 590 (707)
T KOG0263|consen 525 NKPLRIFAGHLSDVDCVSFHPNSNYVATGSSD--RTVRLWDVST--G--NSVRIFTGH--------KGPVTALAFSPCGR 590 (707)
T ss_pred CCchhhhcccccccceEEECCcccccccCCCC--ceEEEEEcCC--C--cEEEEecCC--------CCceEEEEEcCCCc
Confidence 566677777666554 6799998776643321 1346666543 3 557777543 233 345899999
Q ss_pred EEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEE
Q 011049 108 NVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILT 185 (494)
Q Consensus 108 ~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~ 185 (494)
+|+-.. +.. .|-+||+.+|+......... +...+.+||.||..++.
T Consensus 591 ~LaSg~-------------------ed~--~I~iWDl~~~~~v~~l~~Ht-----------~ti~SlsFS~dg~vLas 636 (707)
T KOG0263|consen 591 YLASGD-------------------EDG--LIKIWDLANGSLVKQLKGHT-----------GTIYSLSFSRDGNVLAS 636 (707)
T ss_pred eEeecc-------------------cCC--cEEEEEcCCCcchhhhhccc-----------CceeEEEEecCCCEEEe
Confidence 887643 122 27778888875422111111 01123488999986654
|
|
| >KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=82.56 E-value=14 Score=32.54 Aligned_cols=104 Identities=16% Similarity=0.227 Sum_probs=59.1
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEE--EEEcCCCCCCCc-eEeeecccccccCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRT--WLVCPGSKDVAP-RVLFDRVFENVYSD 94 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~--~~~~~~~g~~~~-~~lt~~~~~~~~~~ 94 (494)
+.||.+-+ ++++..+-..-..-.+..|+-|-|.++|+-.. +-++ |-++..+|.... +.+++-....
T Consensus 139 g~Ly~~~~----~h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsl---n~~V~a~dyd~~tG~~snr~~i~dlrk~~---- 207 (310)
T KOG4499|consen 139 GELYSWLA----GHQVELIWNCVGISNGLAWDSDAKKFYYIDSL---NYEVDAYDYDCPTGDLSNRKVIFDLRKSQ---- 207 (310)
T ss_pred cEEEEecc----CCCceeeehhccCCccccccccCcEEEEEccC---ceEEeeeecCCCcccccCcceeEEeccCC----
Confidence 35666544 56766666655555678999999999987543 3455 787888875433 3454433221
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCce
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSK 149 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~ 149 (494)
|-.+ .-|||..| - .+.+.++- .- .+. .++.+|+.+|+.
T Consensus 208 ~~e~---~~PDGm~I--D----~eG~L~Va-~~-----ng~--~V~~~dp~tGK~ 245 (310)
T KOG4499|consen 208 PFES---LEPDGMTI--D----TEGNLYVA-TF-----NGG--TVQKVDPTTGKI 245 (310)
T ss_pred CcCC---CCCCcceE--c----cCCcEEEE-Ee-----cCc--EEEEECCCCCcE
Confidence 1111 36888765 1 11122221 11 112 388888888874
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=82.55 E-value=3.8 Score=41.44 Aligned_cols=70 Identities=13% Similarity=0.117 Sum_probs=42.3
Q ss_pred hhHHHHHhCCeEEEeCCCCCCCCCCCCCCC----chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHH
Q 011049 288 TSSLIFLARRFAVLAGPSIPIIGEGDKLPN----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 288 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~----~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~ 363 (494)
.....|+..||.-. . ..+....+.. ....+..+..+...|+.+.+.. ..+++.|+||||||.+++.++.
T Consensus 160 kLIe~L~~iGY~~~---n--L~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~n--ggkKVVLV~HSMGglv~lyFL~ 232 (642)
T PLN02517 160 VLIANLARIGYEEK---N--MYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATN--GGKKVVVVPHSMGVLYFLHFMK 232 (642)
T ss_pred HHHHHHHHcCCCCC---c--eeecccccccCccchhhhhHHHHHHHHHHHHHHHHc--CCCeEEEEEeCCchHHHHHHHH
Confidence 35567888999721 1 1121112111 1112344566777777776542 1378999999999999998876
Q ss_pred h
Q 011049 364 H 364 (494)
Q Consensus 364 ~ 364 (494)
.
T Consensus 233 w 233 (642)
T PLN02517 233 W 233 (642)
T ss_pred h
Confidence 3
|
|
| >KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=81.88 E-value=13 Score=36.96 Aligned_cols=65 Identities=9% Similarity=0.054 Sum_probs=42.5
Q ss_pred cccccceecCCCceEEEEeeee-ccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEE
Q 011049 41 LRFRSVSWCDDSLALVNETWYK-TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 41 ~~~~~p~wspDg~~i~f~~~~~-~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
...-.++|-|-|..++..+-.. ...-+.|-+....+ .++.+...+..- .+ .+.|||.|++++...
T Consensus 446 e~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~--~~~lVk~~dk~~-----~N-~vfwsPkG~fvvva~ 511 (698)
T KOG2314|consen 446 ESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIK--KPSLVKELDKKF-----AN-TVFWSPKGRFVVVAA 511 (698)
T ss_pred hheeeeeeccCCCeEEEEEccccccceeEEEeecCCC--chhhhhhhcccc-----cc-eEEEcCCCcEEEEEE
Confidence 3445678999999988877422 12467777776555 666665544321 11 233999999998876
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=80.95 E-value=28 Score=38.37 Aligned_cols=77 Identities=9% Similarity=0.104 Sum_probs=45.3
Q ss_pred ccceecCCCceEEEEeee--eccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccce
Q 011049 44 RSVSWCDDSLALVNETWY--KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 121 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~--~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~ 121 (494)
...+|-.||+++|.++-. .+....+-+.+-+| + ..-+.++... -...+.|.|.|..|+-... ...+..
T Consensus 213 ~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~ReG---~-L~stSE~v~g-----Le~~l~WrPsG~lIA~~q~-~~~~~~ 282 (928)
T PF04762_consen 213 VRISWRGDGEYFAVSSVEPETGSRRVIRVYSREG---E-LQSTSEPVDG-----LEGALSWRPSGNLIASSQR-LPDRHD 282 (928)
T ss_pred eEEEECCCCcEEEEEEEEcCCCceeEEEEECCCc---e-EEeccccCCC-----ccCCccCCCCCCEEEEEEE-cCCCcE
Confidence 345699999998887652 11123444444443 2 2233333332 2223449999998887764 444566
Q ss_pred EEEEccCCC
Q 011049 122 YILLNGRGF 130 (494)
Q Consensus 122 ~~~~~~~g~ 130 (494)
.++|.++|-
T Consensus 283 VvFfErNGL 291 (928)
T PF04762_consen 283 VVFFERNGL 291 (928)
T ss_pred EEEEecCCc
Confidence 778888774
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 494 | ||||
| 2ecf_A | 741 | Crystal Structure Of Dipeptidyl Aminopeptidase Iv F | 1e-08 | ||
| 2qr5_A | 582 | Aeropyrum Pernix Acylaminoacyl Peptidase, H367a Mut | 7e-06 | ||
| 1ve6_A | 582 | Crystal Structure Of An Acylpeptide HydrolaseESTERA | 7e-06 | ||
| 2qzp_A | 562 | Crystal Structure Of Mutation Of An Acylptide Hydro | 8e-06 | ||
| 2hu8_A | 582 | Binding Of Inhibitors By Acylaminoacyl Peptidase Le | 2e-05 | ||
| 2gbc_A | 730 | Native Dpp-Iv (Cd26) From Rat Length = 730 | 2e-05 | ||
| 3o4j_A | 582 | Structure And Catalysis Of Acylaminoacyl Peptidase | 3e-05 | ||
| 3o4h_A | 582 | Structure And Catalysis Of Acylaminoacyl Peptidase | 7e-05 | ||
| 1xfd_A | 723 | Structure Of A Human A-Type Potassium Channel Accel | 2e-04 |
| >pdb|2ECF|A Chain A, Crystal Structure Of Dipeptidyl Aminopeptidase Iv From Stenotrophomonas Maltophilia Length = 741 | Back alignment and structure |
|
| >pdb|2QR5|A Chain A, Aeropyrum Pernix Acylaminoacyl Peptidase, H367a Mutant Length = 582 | Back alignment and structure |
|
| >pdb|1VE6|A Chain A, Crystal Structure Of An Acylpeptide HydrolaseESTERASE FROM Aeropyrum Pernix K1 Length = 582 | Back alignment and structure |
|
| >pdb|2QZP|A Chain A, Crystal Structure Of Mutation Of An Acylptide HydrolaseESTERASE FROM AEROPYRUM PERNIX K1 Length = 562 | Back alignment and structure |
|
| >pdb|2HU8|A Chain A, Binding Of Inhibitors By Acylaminoacyl Peptidase Length = 582 | Back alignment and structure |
|
| >pdb|2GBC|A Chain A, Native Dpp-Iv (Cd26) From Rat Length = 730 | Back alignment and structure |
|
| >pdb|3O4J|A Chain A, Structure And Catalysis Of Acylaminoacyl Peptidase Length = 582 | Back alignment and structure |
|
| >pdb|3O4H|A Chain A, Structure And Catalysis Of Acylaminoacyl Peptidase Length = 582 | Back alignment and structure |
|
| >pdb|1XFD|A Chain A, Structure Of A Human A-Type Potassium Channel Accelerating Factor Dppx, A Member Of The Dipeptidyl Aminopeptidase Family Length = 723 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A Length = 662 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 3e-35
Identities = 50/286 (17%), Positives = 88/286 (30%), Gaps = 58/286 (20%)
Query: 225 EMIKYQRKDGVPLTATLYLPPG--YDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEF 282
++ + DG + A +Y P + D P + A+ G P
Sbjct: 392 QIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHG---------GPTSRVPAVL 442
Query: 283 SGMTPTSSLIFLARR-FAVLAGPSIPIIGEGDKLPNDR--------FVEQL--------V 325
+ R V N + E+L V
Sbjct: 443 DLDVA-----YFTSRGIGVAD-------------VNYGGSTGYGRAYRERLRGRWGVVDV 484
Query: 326 SSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN----- 380
A + G AD +R+AV G S G + A L ++ CG +
Sbjct: 485 EDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLGWA 543
Query: 381 KTLTP----FGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQA 436
T + E Y + +P+T A++++ P L++ G D P Q
Sbjct: 544 DGGTHDFESRYLDFLIGSFEEFPERYRDRAPLTRADRVRVPFLLLQGLEDPVCP--PEQC 601
Query: 437 ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482
+RF +A+ G G + E H + +E ++ + +
Sbjct: 602 DRFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAELSLYAQV 647
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A Length = 582 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 8e-33
Identities = 47/281 (16%), Positives = 87/281 (30%), Gaps = 59/281 (20%)
Query: 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSG 284
++ + DG + + P P + V G P
Sbjct: 334 RLVWVESFDGSRVPTYVLESGR----APTPGPTVVL--------------VHGGPFAEDS 375
Query: 285 MTPTSSLIFLARR-FAVLAGPSIPIIGEGDKLPNDR--------FVEQL--------VSS 327
+ + LA F V+ PN R + ++ +
Sbjct: 376 DSWDTFAASLAAAGFHVVM-------------PNYRGSTGYGEEWRLKIIGDPCGGELED 422
Query: 328 AEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN-----KT 382
AA G+A + + G+SYG +MT L P LF G+A + + +
Sbjct: 423 VSAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYEL 480
Query: 383 LTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPM-QAERFFD 441
+ + + SPI H ++IK+P+ +IH + + P+ R
Sbjct: 481 SDAAFRNFIEQLTGGSREIMRSRSPINHVDRIKEPLALIHPQNASRT---PLKPLLRLMG 537
Query: 442 ALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482
L G ++P H E+ + ++ +L
Sbjct: 538 ELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQ 578
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290 | Back alignment and structure |
|---|
Score = 113 bits (283), Expect = 3e-28
Identities = 33/267 (12%), Positives = 72/267 (26%), Gaps = 34/267 (12%)
Query: 221 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPN 280
+ I+ L+ TL P G P + + + G
Sbjct: 3 EAKLSSIEIPV-GQDELSGTLLTPTGM--------PGVLFVH--------------GWGG 39
Query: 281 EFSGMTPTSSLIFLARR-FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG 339
+ + + + Q + +AA +++
Sbjct: 40 SQHHSLVRAR--EAVGLGCICMT-FDLRGHEGYASMRQSVTRAQNLDDIKAAYDQLASLP 96
Query: 340 VADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS----YNKTLTPFGFQTEFRTL 395
D IAV G SYG +++A L P + + + +++ +
Sbjct: 97 YVDAHSIAVVGLSYGGYLSALLTRERPVEWLALRSPALYKDAHWDQPKVSLNADPDLMDY 156
Query: 396 WEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLL 455
+ + + K +L++ E D V + DA + ++
Sbjct: 157 RRRALAPGDNLALAACAQYKGDVLLVEAENDVIVP--HPVMRNYADAFT-NARSLTSRVI 213
Query: 456 PFEHHVYAARENVMHVIWETDRWLQKY 482
H + +E+ WL +
Sbjct: 214 AGADHALSVKEHQQEYTRALIDWLTEM 240
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* Length = 318 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 1e-26
Identities = 42/290 (14%), Positives = 77/290 (26%), Gaps = 67/290 (23%)
Query: 227 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWA--YPEDYKSKDAAGQVRGSPNEFSG 284
+ Y+ +T +P +GP P + Y G +E
Sbjct: 59 LTYKSFGNARITGWYAVPDK-----EGPHPAIVKYHGYN---------ASYDGEIHEM-- 102
Query: 285 MTPTSSLIFLARRFAVLA----------GPSIPIIGE-------GDKLPNDRFVEQLVSS 327
+ + +A SI G G + + +
Sbjct: 103 ------VNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLD 156
Query: 328 AEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN----KTL 383
A A+E + D +RI V G S G +T A + N +
Sbjct: 157 AVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDIPKAAVADYPYLSNFERAIDV 216
Query: 384 TPFGFQTEFR----------TLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFP 433
E T +A + A+++K P+L+ G +D P
Sbjct: 217 ALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVT---P 273
Query: 434 M-QAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482
++ L+ L + + H Y E + ++
Sbjct: 274 PSTVFAAYNHLETK---KELKVYRYFGHEYIPAFQT-----EKLAFFKQI 315
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* Length = 337 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 1e-25
Identities = 39/281 (13%), Positives = 76/281 (27%), Gaps = 41/281 (14%)
Query: 227 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFW--------AYPEDYKSKDAAGQV--- 275
+ + G + L +P ++ LPC+ +P D+ + G +
Sbjct: 71 VTFSGYRGQRIKGWLLVPKL----EEEKLPCVVQYIGYNGGRGFPHDWLFWPSMGYICFV 126
Query: 276 ---RGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAV 332
RG + + P G D P + ++ + A AV
Sbjct: 127 MDTRGQGSGWLKGDTPD----YPEGPVDPQYPGFMTRGILD--PRTYYYRRVFTDAVRAV 180
Query: 333 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT-------- 384
E D RI + G S G + + A + +
Sbjct: 181 EAAASFPQVDQERIVIAGGSQGGGIALAVSALSKKAKALLCDVPFLCHFRRAVQLVDTHP 240
Query: 385 ----PFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFF 440
+T + A + K P L G +D+ + P F
Sbjct: 241 YAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDN---ICPP--STVF 295
Query: 441 DALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481
A + + + P+ +H + + + +K
Sbjct: 296 AAYNYYAGPKEIRIYPYNNHEGGGSFQAVEQVKFLKKLFEK 336
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} Length = 346 | Back alignment and structure |
|---|
Score = 99.1 bits (247), Expect = 4e-23
Identities = 42/264 (15%), Positives = 65/264 (24%), Gaps = 51/264 (19%)
Query: 227 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFW--------AYPEDYKSKDAAG----- 273
+ + G + A P +G P L D + AAG
Sbjct: 85 LYFTGVRGARIHAKYIKPKT-----EGKHPALIRFHGYSSNSGDWNDKLNYVAAGFTVVA 139
Query: 274 -QVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAV 332
VRG S L G I G D ++ +
Sbjct: 140 MDVRGQGG--------QSQDVGGVTGNTLNGH--IIRGLDDD-ADNMLFRHIFLDTAQLA 188
Query: 333 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT-------- 384
V+ D R+ V G S G ++ A P + +
Sbjct: 189 GIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPRVRKVVSEYPFLSDYKRVWDLDLAKN 248
Query: 385 ----PFGFQTEFRTLWEATNVYIE----MSPITHANKIKKPILIIHGEVDDKVGLFPMQA 436
+ F E N + A +IK +L+ G +D P
Sbjct: 249 AYQEITDYFRLFDPRHERENEVFTKLGYIDVKNLAKRIKGDVLMCVGLMDQVC---P--P 303
Query: 437 ERFFDALKGHGALSRLVLLPFEHH 460
F A + + + P H
Sbjct: 304 STVFAAYNNIQSKKDIKVYPDYGH 327
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} Length = 741 | Back alignment and structure |
|---|
Score = 94.0 bits (234), Expect = 1e-20
Identities = 70/302 (23%), Positives = 111/302 (36%), Gaps = 53/302 (17%)
Query: 206 SSQITNFPHPYPTLASLQK--EMIKYQRKDG-VPLTATLYLPPGYDQSKDGPLPCLFWAY 262
+ + + HPY Q+ E DG PL ++ P G+D +K P + Y
Sbjct: 467 ENDLADPKHPYARYREAQRPVEFGTLTAADGKTPLNYSVIKPAGFDPAK--RYPVAVYVY 524
Query: 263 --PEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR-FAVLA---------GPSI--PI 308
P A+ V + + G +LA++ + V + G +
Sbjct: 525 GGP-------ASQTV---TDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRDFGGAL 574
Query: 309 IGE-GDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 367
G+ G D QL V + ++ DP+RI V G S G +MT LLA A
Sbjct: 575 YGKQGTVEVAD----QL-----RGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASD 625
Query: 368 LFCCGIARSGSYNKTL--TPFGFQTE--FRTLWEATNVYIEMSPITHANKIKKPILIIHG 423
+ CG+A + + L + + TE Y E +TH ++ P+L+IHG
Sbjct: 626 SYACGVAGAPVTDWGLYDSHY---TERYMDLPARNDAGYREARVLTHIEGLRSPLLLIHG 682
Query: 424 EVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHH--VYAARENVMHVIWETDRWLQK 481
DD V + AL+ G L+ P H A + V +L +
Sbjct: 683 MADDNV--LFTNSTSLMSALQKRGQPFELMTYPGAKHGLSGADALHRYRVAE---AFLGR 737
Query: 482 YC 483
Sbjct: 738 CL 739
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... Length = 740 | Back alignment and structure |
|---|
Score = 92.2 bits (229), Expect = 5e-20
Identities = 86/546 (15%), Positives = 161/546 (29%), Gaps = 114/546 (20%)
Query: 8 GDANVEVS-----PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYK 62
G N V + A + P + D V+W + W +
Sbjct: 222 GAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISL--QWLR 279
Query: 63 TSQT--RTWLVCPGSKDVAPRVLFDRVFENVYSD-------PGSPMMTRTSTGTNVIAKI 113
Q + L R + + P P T I
Sbjct: 280 RIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKII-S 338
Query: 114 KKENDEQIY-ILLNGRGFTP--EGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFG 170
+E I ++ + T +G + + + + I + + +
Sbjct: 339 NEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQL 398
Query: 171 QGEEDINLNQLKILTSKE-----SKTEITQYHILSW-----PL---------KKSSQITN 211
+ ++ + S ++ +Y+ L PL K + +
Sbjct: 399 IDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLED 458
Query: 212 FPHPYPTLASLQ--KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPE----- 264
L ++Q + + + + + LPP +D+SK P L Y
Sbjct: 459 NSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSK--KYPLLLDVYAGPCSQK 516
Query: 265 -------DYKSKDAAGQ--------VRGSPN---EFSGMTPTSSLIFLARRFAVLAGPSI 306
++ + A+ + RGS + RR
Sbjct: 517 ADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAI--------NRRL-------- 560
Query: 307 PIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP 366
G D Q+ A + + G D RIA+ G SYG ++T+ +L
Sbjct: 561 -----GTFEVED----QI-----EAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGS 606
Query: 367 HLFCCGIARSG-----SYNKTLTPFGFQTE----FRTLWEATNVYIEMSPITHANKIK-K 416
+F CGIA + Y+ + + TE T + + Y + ++ A K
Sbjct: 607 GVFKCGIAVAPVSRWEYYD---SVY---TERYMGLPTPEDNLDHYRNSTVMSRAENFKQV 660
Query: 417 PILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETD 476
L+IHG DD V Q+ + AL G + + E H A+ H+
Sbjct: 661 EYLLIHGTADDNV--HFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMS 718
Query: 477 RWLQKY 482
++++
Sbjct: 719 HFIKQC 724
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* Length = 706 | Back alignment and structure |
|---|
Score = 90.9 bits (226), Expect = 1e-19
Identities = 55/282 (19%), Positives = 90/282 (31%), Gaps = 52/282 (18%)
Query: 223 QKEMIKYQRKDG-VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNE 281
+ DG PL L +P +D +K P + + Y + A V
Sbjct: 454 EIRTGTIMAADGQTPLYYKLTMPLHFDPAK--KYPVIVYVYGGPH-----AQLV---TKT 503
Query: 282 FSGMTPTSSLIFLARRFAVLA---------GPSI--PIIGE-GDKLPNDRFVEQLVSSAE 329
+ + + +AV G + I G D Q+
Sbjct: 504 WRSSVGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMAD----QM----- 554
Query: 330 AAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG-----SYNKTLT 384
V+ + + D RI V G SYG FMT +L+ +F G+A Y
Sbjct: 555 CGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRYA---I 611
Query: 385 PFGFQTE--FRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDA 442
+ E F E Y + + A +K +++IHG +D V + F DA
Sbjct: 612 MY---GERYFDAPQENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVV--VWQHSLLFLDA 666
Query: 443 LKGHGALSRLVLLPFEHH--VYAARENVMHVIWETDRWLQKY 482
+ P H + R ++ I R+ +
Sbjct: 667 CVKARTYPDYYVYPSHEHNVMGPDRVHLYETIT---RYFTDH 705
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} Length = 719 | Back alignment and structure |
|---|
Score = 88.7 bits (220), Expect = 8e-19
Identities = 58/286 (20%), Positives = 97/286 (33%), Gaps = 75/286 (26%)
Query: 233 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPE------------DYKSKDAAGQ------ 274
D + L + LPP +D+SK P L Y ++ S A+ +
Sbjct: 476 DEITLWYKMILPPQFDRSK--KYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIAL 533
Query: 275 --VRGSPN---EFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAE 329
RG+ + R+ G D Q+
Sbjct: 534 VDGRGTAFQGDKLLYAV--------YRKL-------------GVYEVED----QI----- 563
Query: 330 AAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG-----SYNKTLT 384
AV + + G D RIA+ G SYG ++++ LA LF CGIA + Y +
Sbjct: 564 TAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYA---S 620
Query: 385 PFGFQTE--FRTLWEATN--VYIEMSPITHANKIK-KPILIIHGEVDDKVGLFPMQAERF 439
+ TE + N Y + + A + L+IHG DD V + +
Sbjct: 621 VY---TERFMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTADDNV--HFQNSAQI 675
Query: 440 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485
AL + + ++H + + H+ +L++ C S
Sbjct: 676 AKALVNAQVDFQAMWYSDQNH-GLSGLSTNHLYTHMTHFLKQ-CFS 719
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 Length = 723 | Back alignment and structure |
|---|
Score = 85.3 bits (211), Expect = 1e-17
Identities = 77/528 (14%), Positives = 144/528 (27%), Gaps = 82/528 (15%)
Query: 8 GDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTR 67
G N +S I P E P+ + V W + V TW +Q
Sbjct: 222 GSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAV--TWLNRAQNV 279
Query: 68 TWLV-CPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTN--VIAKIKKENDEQIYIL 124
+ L C + V + D + + + G I I + + Y +
Sbjct: 280 SILTLCDATTGVCTKKHEDE--SEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHI 337
Query: 125 --------LNGRGFTP--EGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEE 174
+ G+ + + + + S + + G
Sbjct: 338 TVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNF 397
Query: 175 DINLNQLKILT---------SKESKTEITQYHILSWPL---------KKSSQITNFPHPY 216
+ ++ S + + P+ KK + H
Sbjct: 398 NRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKKKMFDLETNEHVK 457
Query: 217 PTLASLQKEMIKYQ--RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQ 274
+ Q ++Y+ D L + P + + P L +
Sbjct: 458 KAINDRQMPKVEYRDIEIDDYNLPMQILKPATFTDTT--HYPLLLVVDGTPG-----SQS 510
Query: 275 VRGSPNEFSGMTPTSSLIFLARR-FAVLA----GPSIPIIGEGDKL---PNDRFVEQLVS 326
V +F T + ++ V+ G +G KL R
Sbjct: 511 VA---EKFEVSWET---VMVSSHGAVVVKCDGRGSG----FQGTKLLHEVRRRLGLLEEK 560
Query: 327 SAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP----HLFCCGIARSG----- 377
AV +++ D +R+AV G YG +++ ++L F CG A S
Sbjct: 561 DQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFK 620
Query: 378 SYNKTLTPFGFQTE--FRTLWEATNVYIEMSPITHANKIKK-PILIIHGEVDDKVGLFPM 434
Y + F +E Y + +++ LIIH D+K+
Sbjct: 621 LYA---SAF---SERYLGLHGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKI--HFQ 672
Query: 435 QAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482
L A L + P E H + + H+ + +
Sbjct: 673 HTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVEC 720
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A Length = 415 | Back alignment and structure |
|---|
Score = 82.4 bits (203), Expect = 4e-17
Identities = 38/274 (13%), Positives = 69/274 (25%), Gaps = 63/274 (22%)
Query: 233 DGVPLTATLYLPPGYDQSKDGPLPCL-----FWAYPEDYKSKDAAGQVRGSPNEFSGMTP 287
+ +TA L+L D P P + + D M
Sbjct: 176 EKGKITAHLHLTNT-----DKPHPVVIVSAGLDSLQTD-------------------MWR 211
Query: 288 TSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIA 347
A+L +P +G K P +L A + E+ D R+
Sbjct: 212 LFRDHLAKHDIAMLT-VDMPSVGYSSKYPLTEDYSRLHQ---AVLNELFSIPYVDHHRVG 267
Query: 348 VGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT--------PFGFQTEFRTLWEAT 399
+ G +G L + + P + + +
Sbjct: 268 LIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQKLQQMPKMYLDVLASRLGKS 327
Query: 400 NVYIEM------------SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG 447
V I + K K PIL + E D + P + +G
Sbjct: 328 VVDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGD---PVSPYSDNQMVAFFSTYG 384
Query: 448 ALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481
++ + E + + + WL+
Sbjct: 385 KAKKI----SSKTITQGYEQSLDLAIK---WLED 411
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 Length = 386 | Back alignment and structure |
|---|
Score = 82.0 bits (202), Expect = 4e-17
Identities = 46/263 (17%), Positives = 79/263 (30%), Gaps = 47/263 (17%)
Query: 233 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLI 292
DG+P+ + +P G GP P + + + E M
Sbjct: 135 DGIPMPVYVRIPEG-----PGPHPAVIMLGGLE-----------STKEESFQMENL---- 174
Query: 293 FLARRFAVLA--GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGG 350
L R A GP + E ++ D E+ S A V+ + + I V G
Sbjct: 175 VLDRGMATATFDGPGQGEMFEYKRIAGDY--EKYTS---AVVDLLTKLEAIRNDAIGVLG 229
Query: 351 HSYGAFMTAHLLAHAPHLFCCGIARSGSYN----KTLTPFGFQTEFRTLW------EATN 400
S G A P L C I+ G + TP ++ +
Sbjct: 230 RSLGGNYALKSAACEPRLAAC-ISWGGFSDLDYWDLETPLTKESWKYVSKVDTLEEARLH 288
Query: 401 VYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHH 460
V+ + ++I P I+HG D+ + + + + LV+ H
Sbjct: 289 VHAALETRDVLSQIACPTYILHGVHDE---VPLSFVDTVLELVPAEHL--NLVVEKDGDH 343
Query: 461 V-YAARENVMHVIWETDRWLQKY 482
+ + + WL
Sbjct: 344 CCHNLGIRPRLEMAD---WLYDV 363
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A Length = 380 | Back alignment and structure |
|---|
Score = 80.9 bits (199), Expect = 1e-16
Identities = 44/251 (17%), Positives = 73/251 (29%), Gaps = 48/251 (19%)
Query: 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFW--AYPEDYKSKDAAGQVRGSPNEFSGMTPTS 289
+ GV + L++P + + PL + + E D QV G+ G +
Sbjct: 153 ETGVEIPYRLFVPKDVNPDRKYPL--VVFLHGAGER--GTDNYLQVAGNR----GAVVWA 204
Query: 290 SLIFLARR-FAVLAGPSIPIIG----EGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPS 344
+ VLA P P N E+ + + + +++ D +
Sbjct: 205 QPRYQVVHPCFVLA-PQCPPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDEN 263
Query: 345 RIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIE 404
RI + G S G + T + P LF I G +
Sbjct: 264 RIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGD------------------------ 299
Query: 405 MSPITHANKIKK-PILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA 463
++ +IK PI + H E D V + L G R
Sbjct: 300 ---VSKVERIKDIPIWVFHAEDDPVV--PVENSRVLVKKLAEIGGKVRYTEYEKGFMEKH 354
Query: 464 ARENVMHVIWE 474
+ H W
Sbjct: 355 GWDP--HGSWI 363
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 Length = 238 | Back alignment and structure |
|---|
Score = 74.8 bits (183), Expect = 2e-15
Identities = 40/199 (20%), Positives = 63/199 (31%), Gaps = 20/199 (10%)
Query: 293 FLARRFAVLAGPSIPIIGEGDKLP----NDRFVEQLVSSAEAAVEEVVR----RGVADPS 344
+ R F +LA P GE + P + R+VE++ A EE R
Sbjct: 47 YAERGFLLLA-FDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGL 105
Query: 345 RIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIE 404
+ + G S GAF+ LLA + L +
Sbjct: 106 PLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQV-----VEDPGVLALYQ 160
Query: 405 MSPITHANKI-KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA 463
P T P+L +HG D V + E+ +AL+ H RL E +
Sbjct: 161 APPATRGEAYGGVPLLHLHGSRDHIVP--LARMEKTLEALRPHYPEGRLARFVEEGAGHT 218
Query: 464 ARENVMHVIWETDRWLQKY 482
+ +L+ +
Sbjct: 219 LTPLMAR---VGLAFLEHW 234
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 6e-15
Identities = 45/285 (15%), Positives = 74/285 (25%), Gaps = 72/285 (25%)
Query: 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWA--YPEDYKSKDAAGQVRGSPNEFSGMT 286
Y DG+ L A L +P P + + +
Sbjct: 5 YIDCDGIKLNAYLDMPKN----NPEKCPLCIIIHGFTGHSEERHIVAVQE---------- 50
Query: 287 PTSSLIFLARR-FAVLA------GPSIPIIGEGDKLPNDRFVEQLVSS----AEAAVEEV 335
L A L G S +G F + + A V+
Sbjct: 51 ------TLNEIGVATLRADMYGHGKS-----DGK------FEDHTLFKWLTNILAVVDYA 93
Query: 336 VRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN------------KTL 383
+ I + GHS G A + I S +
Sbjct: 94 KKLDFVTD--IYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELLGLKF 151
Query: 384 TPFGFQTEFRTL--WEATNVYIE----MSPITHANKIKKPILIIHGEVDDKVGLFPMQAE 437
P E + Y+ + +K KP+LI+HG+ D+ V +
Sbjct: 152 DPENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVP--YEASV 209
Query: 438 RFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482
F K +LV +P + H Y + V ++ +
Sbjct: 210 AFSKQYKNC----KLVTIPGDTHCYDHHLEL--VTEAVKEFMLEQ 248
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} Length = 405 | Back alignment and structure |
|---|
Score = 75.1 bits (184), Expect = 9e-15
Identities = 41/230 (17%), Positives = 68/230 (29%), Gaps = 52/230 (22%)
Query: 293 FLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHS 352
+ VL +P G+G N A AA+ ++ A +IA+ G S
Sbjct: 183 GWEHDYNVLM-VDLP--GQGK---NPNQGLHFEVDARAAISAILDWYQAPTEKIAIAGFS 236
Query: 353 YGAFMTAHLLAHAPHLFCCGIARSGSYN-------------------------------- 380
G + TA + + IA + Y+
Sbjct: 237 GGGYFTAQAVEKDKRIKAW-IASTPIYDVAEVFRISFSTALKAPKTILKWGSKLVTSVNK 295
Query: 381 ---KTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAE 437
L + +Q + N +E + I NKI P L + G +D Q++
Sbjct: 296 VAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAGEDSE--LMRQSQ 353
Query: 438 RFFDALKGHGALSRLVLLP-----FEHHVYAARENVMHVIWETDRWLQKY 482
+D K G L H + + ++E WL
Sbjct: 354 VLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFE---WLNHI 400
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 Length = 262 | Back alignment and structure |
|---|
Score = 72.6 bits (178), Expect = 1e-14
Identities = 29/174 (16%), Positives = 51/174 (29%), Gaps = 21/174 (12%)
Query: 293 FLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHS 352
LA G + +L + + ++ AV + I + GHS
Sbjct: 84 HLAVGALS-KG--WAVAMPSYELCPEVRISEITQQISQAVTAAAKE---IDGPIVLAGHS 137
Query: 353 YGAFMTAHLLAHAPHLFCCG------IARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMS 406
G + A +L G + S + L P + + I S
Sbjct: 138 AGGHLVARMLDPEVLPEAVGARIRNVVPISPLSD--LRPLLRTSMNEKFKMDADAAIAES 195
Query: 407 PITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHH 460
P+ N+ + + G + F QA +A V+ +HH
Sbjct: 196 PVEMQNRYDAKVTVWVGGAERPA--FLDQAIWLVEAWDADH-----VIAFEKHH 242
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} Length = 422 | Back alignment and structure |
|---|
Score = 70.6 bits (172), Expect = 3e-13
Identities = 38/243 (15%), Positives = 72/243 (29%), Gaps = 33/243 (13%)
Query: 241 LYLPPG--YDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF 298
+LPPG + G + P + G G+ + + F
Sbjct: 129 HFLPPGVWRQSVRAGRVRA-TLFLPPGPGPFPGIIDIFGIG---GGLLEYRASLLAGHGF 184
Query: 299 AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMT 358
A LA + LP + + E AV +++ I + G S GA +
Sbjct: 185 ATLA----LAYYNFEDLP-NNMDNISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADIC 239
Query: 359 AHLLAHAPHLFCCGIARSG--------------------SYNKTLTPFGFQTEFRTLWEA 398
+ + ++ + F + + A
Sbjct: 240 LSMASFLKNVSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAFSGLVDIVDIRNA 299
Query: 399 TNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG-ALSRLVLLPF 457
+ + K + PIL+I G+ DD + A+ + L+ HG +++ P
Sbjct: 300 LVGGYKNPSMIPIEKAQGPILLIVGQ-DDHNWRSELYAQTVSERLQAHGKEKPQIICYPG 358
Query: 458 EHH 460
H
Sbjct: 359 TGH 361
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A Length = 303 | Back alignment and structure |
|---|
Score = 69.6 bits (170), Expect = 3e-13
Identities = 27/154 (17%), Positives = 47/154 (30%), Gaps = 16/154 (10%)
Query: 321 VEQLVSSAEAAVEEVVRRGVA-DPSRIAVGGHSYGAFMTAHLLAHA-------PHLFCCG 372
+EQL++ + + S + GH GA + A +L +
Sbjct: 128 LEQLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWAL 187
Query: 373 IARSGSYN-KTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKK-----PILIIHGEVD 426
I G Y+ + L+ L +SP+ I ++ E D
Sbjct: 188 IFLCGVYDLRELSNLESVNPKNILGLNERNIESVSPMLWEYTDVTVWNSTKIYVVAAEHD 247
Query: 427 DKVGLFPMQAERFFDALKGHGALSRLVLLPFEHH 460
F Q+ + D L+ G + L H
Sbjct: 248 STT--FIEQSRHYADVLRKKGYKASFTLFKGYDH 279
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} Length = 398 | Back alignment and structure |
|---|
Score = 69.8 bits (170), Expect = 4e-13
Identities = 31/293 (10%), Positives = 66/293 (22%), Gaps = 53/293 (18%)
Query: 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSG 284
E ++ T + +P + P+P + + AG+ +P
Sbjct: 93 EKWEFYPLPKCVSTFLVLIPDN----INKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDR 148
Query: 285 MTPTSSLI--FLARR-FAVLAGPSIPIIGEGDKLPNDRFVE------------------- 322
+ + +A + G+ +R+
Sbjct: 149 YKDPKLTQALNFVKEGYIAVA---VDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWS 205
Query: 323 ---QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH-------APHLFCCG 372
+ + + RI V G S G L + F C
Sbjct: 206 YLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLDTSIYAFVYNDFLCQ 265
Query: 373 IARSGSYNKTLTP---FGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKV 429
F R L I A +PI++ G +D
Sbjct: 266 TQERAEVMTMPDKNGRRPFPNSIRHLIPDFWKNFNFPDI-VAALAPRPIILTEGGLDR-- 322
Query: 430 GLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482
+ + + G + + ++ + + L +
Sbjct: 323 -DLD-LVRKAYAIV---GTPDNVKIYHYKKFSDPDTRKNVEYL---PEGLDRN 367
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} Length = 446 | Back alignment and structure |
|---|
Score = 69.8 bits (170), Expect = 5e-13
Identities = 33/241 (13%), Positives = 67/241 (27%), Gaps = 31/241 (12%)
Query: 242 YLPPGYDQSK-DGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 300
+LPPG + P + + G+ G+ + + + FAV
Sbjct: 146 FLPPGVRREPVRVGRVRGTLFLPPEPGPFPGIVDMFGTG---GGLLEYRASLLAGKGFAV 202
Query: 301 LAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAH 360
+A + LP + E A+ ++ + + G S G +
Sbjct: 203 MA----LAYYNYEDLP-KTMETLHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLS 257
Query: 361 LLAHAPHLFCCGIARSGSYN---------KTLTPFGFQTE-----------FRTLWEATN 400
+ + + + N +TL P G + +
Sbjct: 258 MASFLKGITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIKVTKDGYADIVDVLNSPL 317
Query: 401 VYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG-ALSRLVLLPFEH 459
+ + + L + G+ DD A L+ HG +++ P
Sbjct: 318 EGPDQKSFIPVERAESTFLFLVGQ-DDHNWKSEFYANEACKRLQAHGRRKPQIICYPETG 376
Query: 460 H 460
H
Sbjct: 377 H 377
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} Length = 391 | Back alignment and structure |
|---|
Score = 68.0 bits (165), Expect = 1e-12
Identities = 30/291 (10%), Positives = 62/291 (21%), Gaps = 47/291 (16%)
Query: 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSG 284
E ++ T + P G +P + + G+
Sbjct: 88 EKWEFYPFPKSVSTFLVLKPEH----LKGAVPGVLCIPGSGRTKEGLVGEPGICDKLTED 143
Query: 285 MTPTSSLI---FLARRFAVLAGPSIPIIGEGDKLPNDR-------------------FVE 322
+ + + +A + D D+ ++
Sbjct: 144 YNNPKVSMALNMVKEGYVAVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLG 203
Query: 323 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH-------APHLFCCGIAR 375
+ + + RI + G S G L + F C
Sbjct: 204 YTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVLDKDIYAFVYNDFLCQTQE 263
Query: 376 SGSYNKTLTP---FGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLF 432
F R L Y + A+ +PI+ G +D F
Sbjct: 264 RAVVMTKPDKENRRPFPNSIRHLIPGYWRYFNFPDV-VASLAPRPIIFTEGGLDR---DF 319
Query: 433 PMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVI---WETDRWLQ 480
A G + A + + ++ + +
Sbjct: 320 R----LVQSAYAASGKPENAEFHHYPKFADKAVRKDVEHLDEGLDSKTYFE 366
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 Length = 223 | Back alignment and structure |
|---|
Score = 65.3 bits (159), Expect = 2e-12
Identities = 26/194 (13%), Positives = 51/194 (26%), Gaps = 42/194 (21%)
Query: 277 GSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG-----DKLPNDRF-VEQLVSSAEA 330
+ +A ++A I E +++ RF + +++ A
Sbjct: 41 VDETTLVPLAR-----RIAPTATLVA-ARGRIPQEDGFRWFERIDPTRFEQKSILAETAA 94
Query: 331 A---VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG 387
E +R + G+S GA + + L+ P +
Sbjct: 95 FAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRP---------- 144
Query: 388 FQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG 447
+ + + LII G D+ L HG
Sbjct: 145 --------------MPVLDHVPATDLAGIRTLIIAGAADETY---GPFVPALVTLLSRHG 187
Query: 448 ALSRLVLLPFEHHV 461
A ++P H +
Sbjct: 188 AEVDARIIPSGHDI 201
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 Length = 226 | Back alignment and structure |
|---|
Score = 64.5 bits (157), Expect = 5e-12
Identities = 26/164 (15%), Positives = 43/164 (26%), Gaps = 37/164 (22%)
Query: 322 EQLVSSAEA---AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378
E L+ + ++E + D + I G+S GA + A LL H + +
Sbjct: 94 EDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHP- 152
Query: 379 YNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQ-AE 437
+ + AN K + I G D +E
Sbjct: 153 -----------------------MVPRRGMQLANLAGKSVFIAAGTNDPIC---SSAESE 186
Query: 438 RFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481
L+ A + H + V W K
Sbjct: 187 ELKVLLENANANVTMHWENRGHQL--TMGEVEKAK----EWYDK 224
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} Length = 209 | Back alignment and structure |
|---|
Score = 62.9 bits (153), Expect = 1e-11
Identities = 25/179 (13%), Positives = 48/179 (26%), Gaps = 37/179 (20%)
Query: 307 PIIGEGDKLPNDRFVEQLVSSAEA---AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA 363
+ G G + +E L + V + + D ++ G+S GA + ++
Sbjct: 62 KLRGLGGFTKENFDLESLDEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFL 121
Query: 364 HAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHG 423
F IA G K + + +
Sbjct: 122 RGKINFDKIIAFHG------------------------MQLEDFEQTVQLDDKHVFLSYA 157
Query: 424 EVDDKVGLFPMQ-AERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481
D V P + L+ G + H + +E V+ +WL +
Sbjct: 158 PNDMIV---PQKNFGDLKGDLEDSGCQLEIYESSLGHQL--TQEEVLAAK----KWLTE 207
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 Length = 273 | Back alignment and structure |
|---|
Score = 63.1 bits (153), Expect = 3e-11
Identities = 26/177 (14%), Positives = 53/177 (29%), Gaps = 34/177 (19%)
Query: 328 AEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH-----------------APHLFC 370
A + + +V+ + I + GHS GA +LA +
Sbjct: 100 AVSNITRLVKEK--GLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVK 157
Query: 371 CGIARSGSYN--KTLTPFGFQTEF--------RTLWEATNVYIEMSPITHANKIKKPILI 420
G Y+ + L + F ++E + ++ + +
Sbjct: 158 RVFLLDGIYSLKELLIEYPEYDCFTRLAFPDGIQMYEEEPSRVMPYVKKALSRFSIDMHL 217
Query: 421 IHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHH--VYAARENVMHVIWET 475
+H D+ + Q L+ + +L L H VY + V I++
Sbjct: 218 VHSYSDELL--TLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKNGK-VAKYIFDN 271
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 Length = 251 | Back alignment and structure |
|---|
Score = 58.4 bits (141), Expect = 8e-10
Identities = 37/214 (17%), Positives = 63/214 (29%), Gaps = 47/214 (21%)
Query: 277 GSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG-----DKLPNDRFVEQLVSSAEAA 331
G N+F L + +L+ P + G + + + A
Sbjct: 73 GDENQFFDFGA-----RLLPQATILS-PVGDVSEHGAARFFRRTGEGVYDMVDLERATGK 126
Query: 332 VEEVVR--RGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQ 389
+ + ++ R + G S GA + A++L P LF +
Sbjct: 127 MADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHP------------ 174
Query: 390 TEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQ-AERFFDALKGHGA 448
I P K + +LI GE D P+Q + ++LK G
Sbjct: 175 ------------LIPFEPKISPAKPTRRVLITAGERDPIC---PVQLTKALEESLKAQGG 219
Query: 449 LSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482
V P H + + V +L Y
Sbjct: 220 TVETVWHPGGHEI--RSGEIDAVR----GFLAAY 247
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} Length = 276 | Back alignment and structure |
|---|
Score = 57.9 bits (140), Expect = 2e-09
Identities = 23/122 (18%), Positives = 38/122 (31%), Gaps = 11/122 (9%)
Query: 342 DPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNV 401
+P ++ + G S G + A G+ Y T FG+ ++
Sbjct: 117 NPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVI--LCYPVTSFTFGWPSDLSHFNFEIEN 174
Query: 402 YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV 461
E + P I H D+ V + ++ D L H PFE H
Sbjct: 175 ISEYNISEKVTSSTPPTFIWHTADDEGV--PIYNSLKYCDRLSKHQV-------PFEAHF 225
Query: 462 YA 463
+
Sbjct: 226 FE 227
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* Length = 277 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 2e-09
Identities = 22/134 (16%), Positives = 37/134 (27%), Gaps = 22/134 (16%)
Query: 342 DPSRIAVGGHSYGAFMTAHLLAHAPH-LFCCGIARSGSYNK-----------TLTPFGFQ 389
D RI + G S G + A A + LT GF
Sbjct: 107 DCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLTA-GFP 165
Query: 390 TEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGAL 449
T + T + KP + D+ V P+ + ++ A+ H
Sbjct: 166 TTSAARNQITTDARLWAAQRLVTPASKPAFVWQTATDESVP--PINSLKYVQAMLQHQV- 222
Query: 450 SRLVLLPFEHHVYA 463
+H++
Sbjct: 223 ------ATAYHLFG 230
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* Length = 403 | Back alignment and structure |
|---|
Score = 56.2 bits (135), Expect = 1e-08
Identities = 23/142 (16%), Positives = 36/142 (25%), Gaps = 13/142 (9%)
Query: 238 TATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR 297
++ P E + V S + P
Sbjct: 183 RVWIFTTGDVTAE---ERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAV-------- 231
Query: 298 FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFM 357
VL + N F + V+ + R V G S+G
Sbjct: 232 -YVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKVIAPF-SDRADRTVVAGQSFGGLS 289
Query: 358 TAHLLAHAPHLFCCGIARSGSY 379
+ H P F C +++SGSY
Sbjct: 290 ALYAGLHWPERFGCVLSQSGSY 311
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 55.3 bits (133), Expect = 1e-08
Identities = 37/230 (16%), Positives = 62/230 (26%), Gaps = 40/230 (17%)
Query: 277 GSPNEFSGMTPTSSLIFLARR-FAVLAGPSIPIIGEGDKLPNDRFV----EQLVSSAEAA 331
GSPN+ + M L R + V P G G P D + + + AA
Sbjct: 33 GSPNDMNFMAR-----ALQRSGYGVYV-PLFS--GHGTVEPLDILTKGNPDIWWAESSAA 84
Query: 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH------LFCCGIARSGSYNKTLTP 385
V + + +++ V G S G L P +
Sbjct: 85 VAHMTAKY----AKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLK 140
Query: 386 FG------------FQTEFRTLWEATNVYIEMSPITHAN--KIKKPILIIHGEVDDKVGL 431
+ L + + A+ +K+P I D+ V
Sbjct: 141 YAEYMNRLAGKSDESTQILAYLPGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVD- 199
Query: 432 FPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481
A + DAL A HV + + ++Q+
Sbjct: 200 -GRLAYQLRDALINA-ARVDFHWYDDAKHVITVNSAHHALEEDVIAFMQQ 247
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 55.4 bits (133), Expect = 1e-08
Identities = 22/196 (11%), Positives = 46/196 (23%), Gaps = 47/196 (23%)
Query: 293 FLARR-FAVLA-------GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPS 344
+L+ F V G S G ++ + +S + +G
Sbjct: 57 YLSTNGFHVFRYDSLHHVGLS-----SGS--IDEFTMTTGKNSLCTVYHWLQTKG---TQ 106
Query: 345 RIAVGGHSYGAFMTAHLLAHAPHL--------------FCCGIARSGSYNKTLTPFGFQT 390
I + S A A+ + L + +
Sbjct: 107 NIGLIAASLSA-RVAYEVISDLELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDL 165
Query: 391 EFRTLWEATNVYIEM----------SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFF 440
+F + V++ S + P++ DD V +
Sbjct: 166 DFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVK--QEEVYDML 223
Query: 441 DALKGHGALSRLVLLP 456
++ +L L
Sbjct: 224 AHIRTGHC--KLYSLL 237
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} Length = 283 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 8e-08
Identities = 26/132 (19%), Positives = 38/132 (28%), Gaps = 19/132 (14%)
Query: 342 DPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG----------SYNKTLTPFGFQTE 391
DP +I G S G + A + + + Y GF +
Sbjct: 122 DPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPLLGFPKD 181
Query: 392 FRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSR 451
TL T E++ H N +P I D V + AL
Sbjct: 182 DATLATWTPTPNELAADQHVNSDNQPTFIWTTADDPIV--PATNTLAYATALATAKI--- 236
Query: 452 LVLLPFEHHVYA 463
P+E HV+
Sbjct: 237 ----PYELHVFK 244
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} Length = 306 | Back alignment and structure |
|---|
Score = 51.7 bits (123), Expect = 2e-07
Identities = 42/251 (16%), Positives = 71/251 (28%), Gaps = 60/251 (23%)
Query: 235 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL 294
T+Y P + + + G+ + + + +
Sbjct: 81 GFGGGTIYYPRE-----NNTYGAIAISPG-----------YTGTQSSIAWLGE-----RI 119
Query: 295 ARR-FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAE--AAVEEVVRRGVADPSRIAVGGH 351
A F V+A I D QL ++ + R D SR+AV GH
Sbjct: 120 ASHGFVVIA-----IDTNTTLDQPDSRARQLNAALDYMLTDASSAVRNRIDASRLAVMGH 174
Query: 352 SYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHA 411
S G LA I LTP+ +R
Sbjct: 175 SMGGG-GTLRLASQRPDLKAAIP--------LTPWHLNKSWRD----------------- 208
Query: 412 NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHV 471
I P LII E D + ++ F++++ + L H N
Sbjct: 209 --ITVPTLIIGAEYDTIAS-VTLHSKPFYNSIPS-PTDKAYLELDGASHFAPNITNKTIG 264
Query: 472 IWETDRWLQKY 482
++ WL+++
Sbjct: 265 MYSVA-WLKRF 274
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 2e-07
Identities = 29/231 (12%), Positives = 62/231 (26%), Gaps = 39/231 (16%)
Query: 277 GSPNEFSGMTPTSSLIFLARR-FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEV 335
G+ + + FL + + A P G + + E +
Sbjct: 27 GNSADVRMLGR-----FLESKGYTCHA-PIYKGHGVPPEELVHTGPDDWWQDVMNGYEFL 80
Query: 336 VRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH----LFCCGIARSGSYNKTLTPFGFQTE 391
+G +IAV G S G + L P C + + E
Sbjct: 81 KNKG---YEKIAVAGLSLGGVFSLKLGYTVPIEGIVTMCAPMYIKSEETMYEGVLEYARE 137
Query: 392 FRTLWEATNVYIEMSPIT---------------------HANKIKKPILIIHGEVDDKVG 430
++ + IE H + I P ++ D+ +
Sbjct: 138 YKKREGKSEEQIEQEMEKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQARHDEMIN 197
Query: 431 LFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481
P A ++ ++ + ++ HV + + + +L+
Sbjct: 198 --PDSANIIYNEIE--SPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLES 244
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* Length = 226 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 2e-07
Identities = 36/166 (21%), Positives = 55/166 (33%), Gaps = 39/166 (23%)
Query: 322 EQLVSSAE---AAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL-LAHAPHLFCCGIARSG 377
+QL +SA+ A ++E +G+ RI + G S G + H +A S
Sbjct: 92 DQLNASADQVIALIDEQRAKGI-AAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALST 150
Query: 378 SYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKK--PILIIHGEVDDKVGLFPMQ 435
Y ++ K P+L +HG DD V P
Sbjct: 151 ------------------------YAPTFDDLALDERHKRIPVLHLHGSQDDVV--DPAL 184
Query: 436 AERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481
DAL+ G P H V + E + + WL+K
Sbjct: 185 GRAAHDALQAQGVEVGWHDYPMGHEV--SLEEIHDIG----AWLRK 224
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 3e-07
Identities = 24/172 (13%), Positives = 50/172 (29%), Gaps = 28/172 (16%)
Query: 328 AEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN--KTLTP 385
A A + V I + GH+ G + + L P L + + +
Sbjct: 105 ANAILNYVKTDP--HVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALE 162
Query: 386 FGFQTEFRTLWEATNVYI---------------EMSPITHANKIKKPILIIHGEVDDKVG 430
Q + ++ + + KP+ +IHG D V
Sbjct: 163 GNTQGVTYNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVV- 221
Query: 431 LFPMQ-AERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481
++++ + L L+ H ++ + + T +LQ
Sbjct: 222 --SPNASKKYDQIYQNS----TLHLIEGADHCFSDSYQ-KNAVNLTTDFLQN 266
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 3e-07
Identities = 38/235 (16%), Positives = 72/235 (30%), Gaps = 46/235 (19%)
Query: 277 GSPNEFSGMTPTSSLIFLARR-FAVLAGPSIPIIGEG---DKLPNDRFVEQLVSSAEAAV 332
G+P+ + A+ + V P + G G + + F V+S E
Sbjct: 51 GTPHSMRPLAE-----AYAKAGYTVCL-PRLK--GHGTHYEDMERTTF-HDWVASVEEGY 101
Query: 333 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH----LFCCGIARSGSYNKTLTPFGF 388
+ +R I V G S G +T +L H P + + +T G
Sbjct: 102 GWLKQRC----QTIFVTGLSMGGTLTLYLAEHHPDICGIVPINAAVDIPAIAAGMTGGGE 157
Query: 389 QTEFRTLWEATNVYIEMSPITH---------------------ANKIKKPILIIHGEVDD 427
+ + ++ + + ++I P LI + D
Sbjct: 158 LPRYLDSIGSDLKNPDVKELAYEKTPTASLLQLARLMAQTKAKLDRIVCPALIFVSDEDH 217
Query: 428 KVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482
V P A+ F + +V L +HV + +I + + K+
Sbjct: 218 VVP--PGNADIIFQGIS--STEKEIVRLRNSYHVATLDYDQPMIIERSLEFFAKH 268
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} Length = 223 | Back alignment and structure |
|---|
Score = 49.9 bits (119), Expect = 4e-07
Identities = 42/259 (16%), Positives = 67/259 (25%), Gaps = 66/259 (25%)
Query: 233 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLI 292
V L L +P G + +A +G R SP
Sbjct: 20 GEVKLKGNLVIPNG-------ATGIVLFA--------HGSGSSRYSPR----------NR 54
Query: 293 FLARR-----FAVLAGPSIPIIGEGDKLPNDRF----VEQLVSSAEAAVEEVVRRGVADP 343
++A A L + E + R + L S A + +
Sbjct: 55 YVAEVLQQAGLATLL-IDLLTQEEEEIDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQH 113
Query: 344 SRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYI 403
++ G S G A P ++R G +
Sbjct: 114 LKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPD----------------------- 150
Query: 404 EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA 463
+ +K P L+I G D V E + L RLV++P H++
Sbjct: 151 --LAPSALPHVKAPTLLIVGGYDLPV---IAMNEDALEQL---QTSKRLVIIPRASHLFE 202
Query: 464 ARENVMHVIWETDRWLQKY 482
+ V W Y
Sbjct: 203 EPGALTAVAQLASEWFMHY 221
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* Length = 318 | Back alignment and structure |
|---|
Score = 49.8 bits (118), Expect = 8e-07
Identities = 23/130 (17%), Positives = 40/130 (30%), Gaps = 13/130 (10%)
Query: 341 ADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGI----------ARSGSYNKTLTPFGFQT 390
+P+ ++V G + G +M A L +F G AR+ Y +
Sbjct: 8 VNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCMYNGYPSI 67
Query: 391 EFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAER-FFDALKGHGAL 449
T + + AN ++ I + G D VG M + +
Sbjct: 68 T--TPTANMKSWSGNQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANV 125
Query: 450 SRLVLLPFEH 459
S + H
Sbjct: 126 SYVTTTGAVH 135
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} Length = 258 | Back alignment and structure |
|---|
Score = 49.3 bits (117), Expect = 8e-07
Identities = 28/235 (11%), Positives = 55/235 (23%), Gaps = 50/235 (21%)
Query: 213 PHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWA--YPEDYKSKD 270
P+P +A+ + + +Y P Q P + W
Sbjct: 8 GAPFPAVANFDRSGPYTVSSQSEGPSCRIYRPRDLGQG-GVRHPVILWGNGTG------- 59
Query: 271 AAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEA 330
P+ ++G+ L A V+A G G ++ E
Sbjct: 60 ------AGPSTYAGL-----LSHWASHGFVVAAAETSNAGTGREMLACLDYLV----REN 104
Query: 331 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQT 390
G + R+ GHS G + + P+
Sbjct: 105 DTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAGQDTR--VRTTAP--------IQPYTLGL 154
Query: 391 EFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG 445
+ + P+ ++ G D + A+ +
Sbjct: 155 GH--------------DSASQRRQQGPMFLMSGGGDTIAFPYLN-AQPVYRRANV 194
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 Length = 262 | Back alignment and structure |
|---|
Score = 47.0 bits (111), Expect = 5e-06
Identities = 43/275 (15%), Positives = 81/275 (29%), Gaps = 61/275 (22%)
Query: 215 PYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQ 274
PY T + ++ G T+Y P DG + +
Sbjct: 22 PYATSQTSVSSLVASGFGGG-----TIYYPTSTA---DGTFGAVVISPG----------- 62
Query: 275 VRGSPNEFSGMTPTSSLIFLARR-FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVE 333
+ + + P LA + F V I D QL+S+ + +
Sbjct: 63 FTAYQSSIAWLGP-----RLASQGFVVFT-----IDTNTTLDQPDSRGRQLLSALDYLTQ 112
Query: 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFR 393
R D +R+ V GHS G + A + I LT + +
Sbjct: 113 RSSVRTRVDATRLGVMGHSMGGG-GSLEAAKSRTSLKAAIP--------LTGWNTDKTWP 163
Query: 394 TLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLV 453
+++ P L++ + D ++ F+++L G +
Sbjct: 164 -------------------ELRTPTLVVGADGDTVAP-VATHSKPFYESLPG-SLDKAYL 202
Query: 454 LLPFEHHVYAARENVMHVIWETDRWLQKYCLSNTS 488
L H + + WL+++ S+T
Sbjct: 203 ELRGASHFTPNTSDTTIAKYSIS-WLKRFIDSDTR 236
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} Length = 241 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 2e-05
Identities = 34/191 (17%), Positives = 55/191 (28%), Gaps = 45/191 (23%)
Query: 295 ARRFA-----VLA-------GPSIPIIGEGD---KLPNDRFVEQLVSSAEAAVEEVVRRG 339
RR A +A G +L + Q+++ + R G
Sbjct: 52 CRRLAQEGYLAIAPELYFRQGDPNEYHDIPTLFKELVSKVPDAQVLADLDHVASWAARHG 111
Query: 340 VADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEAT 399
D R+ + G +G +T AH P L +A G + +
Sbjct: 112 G-DAHRLLITGFCWGGRITWLYAAHNPQLKA-AVAWYGKLVGEKSLNSPK---------- 159
Query: 400 NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEH 459
P+ A + P+L ++G D + E AL+ A E
Sbjct: 160 ------HPVDIAVDLNAPVLGLYGAKDASIP--QDTVETMRQALRAANA-------TAEI 204
Query: 460 HVYAARENVMH 470
VY H
Sbjct: 205 VVY---PEADH 212
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* Length = 218 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 2e-05
Identities = 35/165 (21%), Positives = 52/165 (31%), Gaps = 34/165 (20%)
Query: 321 VEQLVSSAE---AAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL-LAHAPHLFCCGIARS 376
+E+L SA+ +E R G+ D SRI + G S G + H + IA S
Sbjct: 81 LEELEVSAKMVTDLIEAQKRTGI-DASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALS 139
Query: 377 GSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQA 436
A++ + P L +HG+ DD V
Sbjct: 140 TYAPT---------------------FGDELELSASQQRIPALCLHGQYDDVV--QNAMG 176
Query: 437 ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481
F+ LK G P H V + + + WL
Sbjct: 177 RSAFEHLKSRGVTVTWQEYPMGHEV--LPQEIHDIG----AWLAA 215
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* Length = 268 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 6e-05
Identities = 36/259 (13%), Positives = 73/259 (28%), Gaps = 45/259 (17%)
Query: 238 TATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR 297
A +YLPPGY + K L+ G GS N++ +++I
Sbjct: 47 PARVYLPPGYSKDK--KYSVLYLL----------HGI-GGSENDWFEGGGRANVI-ADNL 92
Query: 298 FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVR------RGVADPSRIAVGGH 351
A + I+ + + + + ++ D A+ G
Sbjct: 93 IAEGKIKPLIIVTPNTNAAGPGIADGYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGL 152
Query: 352 SYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHA 411
S G + ++ F S + N + + F +A A
Sbjct: 153 SMGGGQSFNIGLTNLDKFAYIGPISAAPN----TYPNERLFPDGGKA------------A 196
Query: 412 NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG-ALSRLVLLPFEHHVYAARENVMH 470
+ K + I G D L +R + + ++ H +
Sbjct: 197 REKLKLLFIACGTND---SLIGF-GQRVHEYCVANNINHVYWLIQGGGHDFNVWKPG--- 249
Query: 471 VIWETDRWLQKYCLSNTSD 489
+W + + L+ +
Sbjct: 250 -LWNFLQMADEAGLTRDGN 267
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} Length = 275 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 8e-05
Identities = 30/306 (9%), Positives = 67/306 (21%), Gaps = 97/306 (31%)
Query: 233 DGVPLTATLYLPPGYDQSKDGPLPCLFW----AYPEDYKSKDAAGQVRGSPNEFSGMTPT 288
D L T+ + + + G N+ S
Sbjct: 12 DAFALPYTIIKAKN-----QPTKGVIVYIHGGGL------------MFGKANDLSPQY-- 52
Query: 289 SSLIFLARRFAV------LAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVAD 342
+ L + + L P + A+ + + +
Sbjct: 53 --IDILTEHYDLIQLSYRLL-------------PEVSLDCII-EDVYASFDAIQSQ--YS 94
Query: 343 PSRIAVGGHSYGAFMTAHLLAHAP----HLFCCGIARSGSYNKTLTPFGFQTEFRTLWEA 398
I G S GA+++ + F + KT + +
Sbjct: 95 NCPIFTFGRSSGAYLSLLIARDRDIDGVIDFYGYSRINTEPFKTTNSYYAKIAQSINETM 154
Query: 399 TNVYIEMSPITHANKIKK--------------------------------------PILI 420
+P+ ++ P+ I
Sbjct: 155 IAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLPPVFI 214
Query: 421 IHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAREN--VMHVIWETDRW 478
H D V + ++E + + S + H + R N + + + +
Sbjct: 215 AHCNGDYDVPV--EESEHIMNHVPH----STFERVNKNEHDFDRRPNDEAITIYRKVVDF 268
Query: 479 LQKYCL 484
L +
Sbjct: 269 LNAITM 274
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A Length = 259 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 9e-05
Identities = 29/269 (10%), Positives = 58/269 (21%), Gaps = 69/269 (25%)
Query: 233 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLI 292
DG + + P + + + + +
Sbjct: 39 DGRTVPGVYWSPAE-----GSSDRLVLLGHG--------GTTHKKVE-----YIEQVAKL 80
Query: 293 FLARRFAVLAGPSIPIIGE-------------------GDKLPNDRFVEQLVSSAEAAVE 333
+ R + +A P GE +++ AA++
Sbjct: 81 LVGRGISAMA-IDGPGHGERASVQAGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALD 139
Query: 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFR 393
+ P G S G M + A + + G
Sbjct: 140 FI--EAEEGPRPTGWWGLSMGTMMGLPVTASDKRIKVALLGLMGVEGVNGEDL------- 190
Query: 394 TLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLV 453
+ A ++ P+ + D+ V F L L
Sbjct: 191 --------------VRLAPQVTCPVRYLLQWDDELV--SLQSGLELFGKLGTKQK--TLH 232
Query: 454 LLPFEHHVYAARENVMHVIWETDRWLQKY 482
+ P +H E T +L +
Sbjct: 233 VNPGKHSAVPTWEM----FAGTVDYLDQR 257
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} Length = 270 | Back alignment and structure |
|---|
Score = 43.1 bits (101), Expect = 1e-04
Identities = 17/150 (11%), Positives = 42/150 (28%), Gaps = 12/150 (8%)
Query: 337 RRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCG--IARSGSY--NKTLTPFGFQTEF 392
+ +P++++ A L +A +G + +P
Sbjct: 128 KARHDNPTQVSGMVLIAPAPDFTSDLIEPLLGDRERAELAENGYFEEVSEYSPEPNIFTR 187
Query: 393 RTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRL 452
+ + + I P+ I+ G D V A + + L L
Sbjct: 188 ALMEDGRANRVMAGMI----DTGCPVHILQGMADPDVP--YQHALKLVEHLPADD--VVL 239
Query: 453 VLLPFEHHVYAARENVMHVIWETDRWLQKY 482
L+ H + +++ + ++
Sbjct: 240 TLVRDGDHRLSRPQDIDRMRNAIRAMIEPR 269
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} Length = 239 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 1e-04
Identities = 33/156 (21%), Positives = 52/156 (33%), Gaps = 37/156 (23%)
Query: 321 VEQLVSSAE---AAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 377
+E + + ++E V+ G+ +RI +GG S G M HL A S
Sbjct: 93 LESIDVMCQVLTDLIDEEVKSGI-KKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSS 151
Query: 378 SYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQ-A 436
L +A+ VY + +N + + HG D+ V A
Sbjct: 152 F----------------LNKASAVYQALQK---SNGVLPELFQCHGTADELV---LHSWA 189
Query: 437 ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVI 472
E LK G + H + NV H +
Sbjct: 190 EETNSMLKSLGV-------TTKFHSF---PNVYHEL 215
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} Length = 331 | Back alignment and structure |
|---|
Score = 43.1 bits (101), Expect = 1e-04
Identities = 27/186 (14%), Positives = 57/186 (30%), Gaps = 33/186 (17%)
Query: 240 TLYLPPGYDQSKDGPLPCL-----------------FWAYPEDYKSKDAAGQVRGSPNEF 282
+ LP GY QS + P + F + + + N
Sbjct: 29 VIALPEGYAQSLEA-YPVVYLLDGEDQFDHMASLLQFLSQGTMPQIPKVIIVGIHNTNRM 87
Query: 283 SGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVAD 342
TPT +L+ + P G + F++ + ++E +R +
Sbjct: 88 RDYTPTHTLVLPSGNKG---NPQYQHTGGAGR-----FLDFIEKELAPSIESQLR---TN 136
Query: 343 PSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY---NKTLTPFGFQTEFRTLWEAT 399
+ GHS+G + L LF +A S + + + ++
Sbjct: 137 GIN-VLVGHSFGGLVAMEALRTDRPLFSAYLALDTSLWFDSPHYLTLLEERVVKGDFKQK 195
Query: 400 NVYIEM 405
+++ +
Sbjct: 196 QLFMAI 201
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 Length = 232 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 1e-04
Identities = 30/160 (18%), Positives = 49/160 (30%), Gaps = 32/160 (20%)
Query: 316 PNDRFVEQLVSSAEAAVEEVVRRGVA---DPSRIAVGGHSYGAFMTAHLLAHAPHLFCCG 372
P+ + E + A ++ ++ + V +RI +GG S G ++ +
Sbjct: 82 PDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGV 141
Query: 373 IARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLF 432
A S W PI AN+ IL HG+ D V
Sbjct: 142 TALSC------------------WLPLRASFPQGPIGGANR-DISILQCHGDCDPLV--P 180
Query: 433 PMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVI 472
M + LK + + Y E +MH
Sbjct: 181 LMFGSLTVEKLKTLVNPANV-----TFKTY---EGMMHSS 212
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A Length = 397 | Back alignment and structure |
|---|
Score = 43.4 bits (101), Expect = 1e-04
Identities = 27/209 (12%), Positives = 51/209 (24%), Gaps = 15/209 (7%)
Query: 202 PLKKSSQITNFPHPYPTLASLQKEMIKYQRKDG----VPLTATLYLPPGYDQSKDGPLPC 257
L SQ + P +++ Y + L +P G GP P
Sbjct: 24 MLASGSQPASGSQPEQAKCNVRVAEFTYATIGVEGEPATASGVLLIPGGER--CSGPYPL 81
Query: 258 LFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA----GPSIPIIGEGD 313
L W +P + + ++ + V+ G
Sbjct: 82 LGWGHPTEALRAQEQ----AKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHP 137
Query: 314 KLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGI 373
L + + + AA + ++ + G+S G
Sbjct: 138 YLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEF 197
Query: 374 ARSGSYNKTLTPFGFQTEFRTLWEATNVY 402
S P+ + F W +N
Sbjct: 198 HLVASAP-ISGPYALEQTFLDSWSGSNAV 225
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} Length = 367 | Back alignment and structure |
|---|
Score = 42.8 bits (100), Expect = 2e-04
Identities = 33/166 (19%), Positives = 50/166 (30%), Gaps = 41/166 (24%)
Query: 215 PYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCL-----FWAYPEDYKSK 269
+P A ++ + + + G+ L A LYLP LP + F A E
Sbjct: 59 TFPLSAKVEHRKVTFANRYGITLAADLYLPKNRG---GDRLPAIVIGGPFGAVKEQSSGL 115
Query: 270 DAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA------GPSIPIIGEGDKLPN-DRFVE 322
A R F LA G S G+ + + D E
Sbjct: 116 YAQT-------------------MAERGFVTLAFDPSYTGES---GGQPRNVASPDINTE 153
Query: 323 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL 368
AAV+ + + RI V G M + +A +
Sbjct: 154 D----FSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDKRV 195
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} Length = 275 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 2e-04
Identities = 19/150 (12%), Positives = 39/150 (26%), Gaps = 28/150 (18%)
Query: 318 DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 377
F + + +E+ D + + GH G H+L + F S
Sbjct: 129 HNFFTFIEEELKPQIEKNFE---IDKGKQTLFGHXLGGLFALHILFTNLNAFQNYFISSP 185
Query: 378 SYNKTLTPFGFQTEFRTLWEATNVYIEMS----PITHANKIKKPILIIHGEVDDKVGLFP 433
S W +E + K + + + G ++ +
Sbjct: 186 SI----------------WWNNKSVLEKEENLIIELNNAKFETGVFLTVGSLEREH--MV 227
Query: 434 MQAERFFDALKGHGALS---RLVLLPFEHH 460
+ A + L + E+H
Sbjct: 228 VGANELSERLLQVNHDKLKFKFYEAEGENH 257
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.9 bits (100), Expect = 2e-04
Identities = 57/469 (12%), Positives = 112/469 (23%), Gaps = 149/469 (31%)
Query: 37 HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96
H +D + + V E + + C +D+ +L +++
Sbjct: 5 HHMDFETGEHQYQYKDILSVFEDAFVDN-----FDCKDVQDMPKSILSKEEIDHIIMSKD 59
Query: 97 SPMMTR------TSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKE 150
+ T S ++ K +E Y L E P +
Sbjct: 60 AVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSP-IKTEQRQPSMM---------T 109
Query: 151 RIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQIT 210
R++ R++ + N NQ+ +Y++ L+ ++
Sbjct: 110 RMYIEQRDRLY---------------NDNQV-----------FAKYNV--SRLQPYLKLR 141
Query: 211 NFPHPYPTLASLQKEMIKYQRKDGVP------LTATLYLPPGYDQSKDGPLPCLFWAYPE 264
L L+ K DGV + + L D +FW
Sbjct: 142 Q------ALLELRPA--KNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFK---IFWL--- 187
Query: 265 DYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQL 324
+P + L L + + P+ + R
Sbjct: 188 ------NLKNCN---------SPETVLEMLQKLLYQI-DPNWTSRSDHSSNIKLRIHS-- 229
Query: 325 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT 384
++ +RR LL P+ C + + K
Sbjct: 230 -------IQAELRR----------------------LLKSKPYENCLLVLLNVQNAKAWN 260
Query: 385 PFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFF---- 440
F + L T + +++ A L + L P + +
Sbjct: 261 AFNLSC--KIL--LTTRFKQVTDFLSAATTTHISL-----DHHSMTLTPDEVKSLLLKYL 311
Query: 441 ---------DALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480
+ L + P + A W D W
Sbjct: 312 DCRPQDLPREVLTTN---------PRRLSIIAESIRDGLATW--DNWKH 349
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* Length = 297 | Back alignment and structure |
|---|
Score = 42.0 bits (98), Expect = 2e-04
Identities = 37/280 (13%), Positives = 69/280 (24%), Gaps = 49/280 (17%)
Query: 208 QITNFPHPYPTLASLQKEMIKYQ-RKDGVPLTATLYLPPGYDQSKDGPLPCLFWA--YPE 264
Q P Y ++K + +YLP GYD +K + E
Sbjct: 23 QYRPAPDSYLNPCPQAGRIVKETYTGINGTKSLNVYLPYGYDPNK--KYNIFYLMHGGGE 80
Query: 265 DYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPII-----GEGDKLPNDR 319
+ + FS +++ A++ G P+I G
Sbjct: 81 NENTI------------FSNDVKLQNIL----DHAIMNGELEPLIVVTPTFNGGNCTAQN 124
Query: 320 FVEQLVSSAEAAVEEVVR---------RGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFC 370
F ++ + VE A GG + G T +++ +
Sbjct: 125 FYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVA 184
Query: 371 CGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVG 430
+ SG Y +P + +K + + G D
Sbjct: 185 YFMPLSGDYWYGNSPQDKANSIAEAINRSG----------LSKREYFVFAATGSEDI--- 231
Query: 431 LFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMH 470
+A+K + + H
Sbjct: 232 -AYANMNPQIEAMKALPHFDYTSDFSKGNFYFLVAPGATH 270
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* Length = 560 | Back alignment and structure |
|---|
Score = 42.7 bits (100), Expect = 3e-04
Identities = 32/289 (11%), Positives = 68/289 (23%), Gaps = 58/289 (20%)
Query: 232 KDGVPLTATLYLPPGYDQSKDGPLPCLF--------WAYPEDYKSKDAAGQVRGSPNEFS 283
+DG L ++ P DG P + + F+
Sbjct: 49 RDGEKLYINIFRPNK-----DGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFT 103
Query: 284 GMTPTSSLIFLARRFAVL------AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVR 337
++ + V+ + S +G + ++ +E
Sbjct: 104 PEESPDPGFWVPNDYVVVKVALRGSDKS-----KGV---LSPWSKREAEDYYEVIEWAAN 155
Query: 338 RGVADPSRIAVGGHSYGAFMTAHLLAHAPH-------------LFCCGIARSGSYNKTLT 384
+ ++ I G SY A + + P ++ G +
Sbjct: 156 QSWSNG-NIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGLNDMYREVAFHGGIPDTGFY 214
Query: 385 PFGFQT------------EFRTLWEATNVYIEM--SPITHANKIKKPILIIHGEVDDKVG 430
F Q + + ++ + ++IK P+L G
Sbjct: 215 RFWTQGIFARWTDNPNIEDLIQAQQEHPLFDDFWKQRQVPLSQIKTPLLTCASWST--QG 272
Query: 431 LFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479
L + F + YA + D +L
Sbjct: 273 LHNRGSFEGFKQAASEEKWLYVHGRKEWESYYARENLERQKSF-FDFYL 320
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* Length = 278 | Back alignment and structure |
|---|
Score = 41.9 bits (98), Expect = 3e-04
Identities = 33/276 (11%), Positives = 66/276 (23%), Gaps = 55/276 (19%)
Query: 209 ITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLF-----WAYP 263
I + + ++ + + R V +P + P L+
Sbjct: 3 IADKGSVFYHFSATSFDSVDGTRHYRV----WTAVPNTTAPAS--GYPILYMLDGNAVMD 56
Query: 264 EDYKSKDAAGQVRGSPNEFSGM------TPTSSLIFLARRFAVLAGPSIPIIGEGDKLP- 316
++ +E + T+ L R + +
Sbjct: 57 R------LDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSRAYDYTPAAESRKTDLHSGRF 110
Query: 317 ------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFC 370
++ F + L + VE+ + D R + GHSYG F
Sbjct: 111 SRKSGGSNNFRQLLETRIAPKVEQGLN---IDRQRRGLWGHSYGGLFVLDSWLS-SSYFR 166
Query: 371 CGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHG--EVDDK 428
+ S S + ++ + K + I+ G D
Sbjct: 167 SYYSASPSL---------------GRGYDALLSRVTAVEPLQFCTKHLAIMEGSATQGDN 211
Query: 429 VGLFPM----QAERFFDALKGHGALSRLVLLPFEHH 460
+ + LK G + P H
Sbjct: 212 RETHAVGVLSKIHTTLTILKDKGVNAVFWDFPNLGH 247
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 Length = 615 | Back alignment and structure |
|---|
Score = 41.7 bits (97), Expect = 5e-04
Identities = 23/157 (14%), Positives = 48/157 (30%), Gaps = 17/157 (10%)
Query: 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSL 291
+DGV L + LP G P + P Y + SP+ +
Sbjct: 33 RDGVKLHTVIVLPKG-----AKNAPIVLTRTP--Y-DASGRTERLASPH-MKDLLSAGDD 83
Query: 292 IFLARRFAVL------AGPS--IPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADP 343
+F+ + + S ++ + P + + A ++ +V+
Sbjct: 84 VFVEGGYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN 143
Query: 344 SRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 380
++ + G SY F L + + S +
Sbjct: 144 GKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 180
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 494 | |||
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 100.0 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 100.0 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 100.0 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 100.0 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 100.0 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 100.0 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 100.0 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 100.0 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 100.0 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 100.0 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 100.0 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 100.0 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 100.0 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.94 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.94 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.94 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.94 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.93 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.93 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.93 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.93 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.92 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.92 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.92 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.92 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.92 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.92 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.92 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.92 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.92 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.92 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.91 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.91 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.91 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.91 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.91 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.91 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.91 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.9 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.9 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.9 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.9 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.9 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.9 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.9 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.89 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.89 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.89 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.89 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.89 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.89 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.89 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.89 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.89 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 99.89 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.89 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.89 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.89 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.88 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.88 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.88 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.88 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.87 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.87 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.87 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.87 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.87 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.87 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.87 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.87 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.86 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.86 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.86 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.86 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.85 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.85 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.85 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.85 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.85 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.84 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.84 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.84 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.84 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.84 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.84 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.84 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.83 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.83 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.83 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.83 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 99.82 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.82 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.82 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.82 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.81 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.81 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.81 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.81 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.81 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.8 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.8 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.79 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.79 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.79 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.79 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 99.78 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.78 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 99.77 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 99.77 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.76 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 99.76 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.76 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 99.76 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 99.76 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.76 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.76 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 99.75 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 99.75 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 99.75 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 99.75 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.75 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.74 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 99.74 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 99.74 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.74 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 99.74 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 99.74 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 99.74 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.74 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 99.74 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 99.73 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 99.73 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.73 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.73 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 99.73 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 99.72 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 99.72 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 99.72 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.72 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.72 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 99.72 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 99.72 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.71 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.71 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 99.71 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.71 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 99.71 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 99.7 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 99.7 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.7 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 99.7 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.7 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 99.69 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 99.69 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 99.69 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 99.68 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.68 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.68 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 99.67 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 99.67 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.67 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.67 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 99.66 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 99.66 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.66 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 99.66 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 99.66 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 99.65 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 99.65 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 99.65 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 99.65 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 99.65 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.65 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 99.64 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 99.64 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 99.64 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 99.64 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.64 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 99.64 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.63 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 99.63 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.62 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 99.62 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 99.62 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 99.61 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.61 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 99.61 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 99.61 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 99.61 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.6 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 99.6 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.58 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 99.58 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 99.58 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 99.56 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.54 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.53 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.27 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.5 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 99.49 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.45 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.43 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.39 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.39 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.38 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.38 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.37 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 99.37 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.36 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.36 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.35 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.35 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.29 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.29 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.28 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.26 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.26 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 99.25 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.2 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 99.19 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 99.17 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 99.15 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 99.14 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 99.14 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.12 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.12 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 99.11 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.11 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 99.09 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.09 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.08 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.07 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 99.07 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.07 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.02 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.0 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 99.0 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 98.99 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 98.97 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 98.97 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 98.96 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 98.96 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 98.95 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 98.94 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 98.94 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 98.93 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 98.93 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 98.86 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 98.85 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 98.84 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.83 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 98.82 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 98.79 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 98.79 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 98.78 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 98.75 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 98.72 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 98.71 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 98.67 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 98.63 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 98.6 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 98.59 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 98.51 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 98.5 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 98.49 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 98.43 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 98.42 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 98.21 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 98.19 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 98.18 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 98.17 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 98.15 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 98.12 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 98.04 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 98.01 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 98.0 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 97.97 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 97.96 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 97.94 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 97.93 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 97.93 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 97.89 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 97.86 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 97.68 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 97.65 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 97.59 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 97.58 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 97.57 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.56 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 97.55 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 97.52 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 97.52 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 97.47 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 97.43 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 97.4 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 97.37 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 97.36 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 97.33 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 97.29 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 97.21 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 97.05 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 97.01 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 97.0 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 96.98 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 96.97 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 96.97 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 96.94 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 96.94 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 96.93 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 96.9 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 96.87 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 96.86 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 96.82 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 96.79 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 96.78 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 96.75 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 96.74 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 96.71 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 96.69 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 96.69 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 96.68 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 96.66 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 96.66 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 96.66 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 96.64 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 96.61 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 96.61 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 96.6 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 96.59 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 96.58 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 96.57 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 96.56 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 96.55 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 96.55 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 96.55 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 96.53 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 96.51 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 96.43 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 96.42 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 96.4 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 96.38 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 96.36 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 96.36 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 96.35 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 96.35 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 96.34 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 96.32 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 96.32 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 96.31 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 96.29 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 96.29 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 96.24 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 96.24 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 96.22 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 96.17 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 96.15 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 96.14 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 96.12 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 96.12 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 96.12 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 96.11 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 96.1 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 96.05 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 96.04 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 96.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 96.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 95.99 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 95.95 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 95.94 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 95.9 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 95.88 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 95.87 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 95.73 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 95.72 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 95.72 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 95.72 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 95.71 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 95.71 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 95.69 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 95.61 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 95.6 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 95.6 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 95.55 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 95.52 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 95.51 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 95.51 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 95.48 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 95.47 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 95.42 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 95.41 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 95.32 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 95.3 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 95.28 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 95.28 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 95.23 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 95.22 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 95.19 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 95.18 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 95.16 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 95.16 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 95.16 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 95.14 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 95.11 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 95.05 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 95.04 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 95.04 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 94.99 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 94.91 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 94.91 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 94.9 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 94.74 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 94.72 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 94.69 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 94.64 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 94.63 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 94.56 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 94.55 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 94.51 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 94.49 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 94.47 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 94.45 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 94.44 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 94.4 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 94.37 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 94.35 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 94.3 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 94.29 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 94.2 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 94.04 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 93.94 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 93.93 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 93.92 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 93.79 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 93.69 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 93.67 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 93.64 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 93.56 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 93.45 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 93.24 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 93.18 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 93.17 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 93.12 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 92.86 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 92.85 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 92.83 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 92.82 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 92.69 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 92.58 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 92.55 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 92.51 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 92.5 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 92.5 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 92.49 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 92.37 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 92.35 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 92.15 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 92.14 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 92.03 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 92.01 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 91.9 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 91.89 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 91.84 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 91.82 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 91.7 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 91.67 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 91.56 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 91.36 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 91.34 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 91.02 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 91.01 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 91.0 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 90.78 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 90.4 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 90.36 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 90.08 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 89.88 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 89.78 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 89.38 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 89.27 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 88.6 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 88.4 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 88.33 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 88.06 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 87.97 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 87.79 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 87.78 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 87.77 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 87.09 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 86.71 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 86.55 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 86.16 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 86.12 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 86.09 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 86.05 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 85.84 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 85.31 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 85.17 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 85.14 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 84.61 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 84.44 |
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=381.39 Aligned_cols=437 Identities=16% Similarity=0.133 Sum_probs=303.6
Q ss_pred ceeeeccCCCCCC---C---CCeeccc------cccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCC------
Q 011049 18 DIIYTQPAEPAEG---E---KPEILHK------LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVA------ 79 (494)
Q Consensus 18 ~~i~~~~~~~~~~---~---~~~~lt~------~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~------ 79 (494)
..||++|+ ++ + +.++++. .+.+...|+|||||+.+++...+......|+++++++| +
T Consensus 228 ~~l~v~d~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg--~~~~~~~ 302 (740)
T 4a5s_A 228 VKFFVVNT---DSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDES--SGRWNCL 302 (740)
T ss_dssp EEEEEEET---TSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETT--TTEEEEC
T ss_pred eEEEEEEC---CCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCC--cccccee
Confidence 37999999 76 6 5666664 45566789999999988887766543568999999987 4
Q ss_pred -ceEeeecccccccCC---CCCCceeeCCCCCEEE-EEEeccCc-----------------------------cceEEEE
Q 011049 80 -PRVLFDRVFENVYSD---PGSPMMTRTSTGTNVI-AKIKKEND-----------------------------EQIYILL 125 (494)
Q Consensus 80 -~~~lt~~~~~~~~~~---~~~~~~~~spDG~~i~-~~~~~~~~-----------------------------~~~~~~~ 125 (494)
.+.++.+... .+.. +..|. |||||+.|+ +.+..... +++.+++
T Consensus 303 ~~~~l~~~~~~-~~v~~~~~~~p~--fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~~d~~~i~f 379 (740)
T 4a5s_A 303 VARQHIEMSTT-GWVGRFRPSEPH--FTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYY 379 (740)
T ss_dssp GGGCEEEECSS-SCSSSSSCCCCE--ECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEEEEECSSEEEE
T ss_pred EEEEeeeccCC-ceEccCcCCCce--EcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEEEEEeCCEEEE
Confidence 2333222211 1111 23566 999999998 44422110 0112222
Q ss_pred ccCCCCCCCCCCceEeeecCCCceE-EEEeeC-cchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 126 NGRGFTPEGNIPFLDLFDINTGSKE-RIWESN-REKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 126 ~~~g~~~~~~~~~l~~~d~~~g~~~-~l~~~~-~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
..++........+||++++++++.+ +++... +. -.....++||+|++.+++.++++. |+.+++++.++
T Consensus 380 ~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~---------~~~~~~~~~S~dg~~~~~~~s~~~-~p~~~l~~~~~ 449 (740)
T 4a5s_A 380 ISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPE---------RCQYYSVSFSKEAKYYQLRCSGPG-LPLYTLHSSVN 449 (740)
T ss_dssp EESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTT---------TBCBEEEEECTTSSEEEEEECSBS-SCEEEEEETTT
T ss_pred EEecCCCCCceeEEEEEECCCCCcceeeccccCCC---------CCceEEEEECCCCCEEEEEeCCCC-CCEEEEEECCC
Confidence 2221000011234555555544322 222110 00 001124689999999999988877 88999999887
Q ss_pred CceeEeecCCCCC----CcccccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCC
Q 011049 204 KKSSQITNFPHPY----PTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSP 279 (494)
Q Consensus 204 ~~~~~lt~~~~~~----~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~ 279 (494)
++..++...+... ........+.+++ +.||.++++++++|+++++.+ ++|+||++||+++... + .
T Consensus 450 ~~~~~~l~~n~~~~~~~~~~~~~~~~~~~~-~~dg~~l~~~~~~P~~~~~~~--~~P~vv~~HGg~~~~~-----~---~ 518 (740)
T 4a5s_A 450 DKGLRVLEDNSALDKMLQNVQMPSKKLDFI-ILNETKFWYQMILPPHFDKSK--KYPLLLDVYAGPCSQK-----A---D 518 (740)
T ss_dssp TEEEEEEECCHHHHHHHTTEECCEEEEEEE-EETTEEEEEEEEECTTCCTTS--CEEEEEECCCCTTCCC-----C---C
T ss_pred CcEEEEeccChhhhhhhhhccCCccEEEEE-ccCCeEEEEEEEeCCCCCCCC--CccEEEEECCCCcccc-----c---c
Confidence 7766665544321 1222334677777 789999999999999986554 4999999999874321 0 1
Q ss_pred CccCCCCchhHHHHH-hCCeEEEeCCCCCCCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHH
Q 011049 280 NEFSGMTPTSSLIFL-ARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGA 355 (494)
Q Consensus 280 ~~~~~~~~~~~~~l~-~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG 355 (494)
..|. ......++ ++||+|+++++++..++|..+.. ..+....++|+.+++++|.+++.+|++||+|+||||||
T Consensus 519 ~~~~---~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG 595 (740)
T 4a5s_A 519 TVFR---LNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGG 595 (740)
T ss_dssp CCCC---CSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHH
T ss_pred cccC---cCHHHHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHH
Confidence 1121 12334555 59999999998876555433211 12223458899999999999888999999999999999
Q ss_pred HHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccc-cccc--cccHHHHHhcCccccccCCCC-CEEEEecCCCCCCCC
Q 011049 356 FMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTE-FRTL--WEATNVYIEMSPITHANKIKK-PILIIHGEVDDKVGL 431 (494)
Q Consensus 356 ~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~sp~~~~~~~~~-P~li~~G~~D~~v~~ 431 (494)
++++.++.++|++|+++|+.+|+.++......+... .+.+ +..++.|...+|+..+.++++ |+|++||+.|.+||
T Consensus 596 ~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~- 674 (740)
T 4a5s_A 596 YVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVH- 674 (740)
T ss_dssp HHHHHHHTTTCSCCSEEEEESCCCCGGGSBHHHHHHHHCCSSTTTTHHHHHHSCSGGGGGGGGGSEEEEEEETTCSSSC-
T ss_pred HHHHHHHHhCCCceeEEEEcCCccchHHhhhHHHHHHcCCCCccccHHHHHhCCHHHHHhcCCCCcEEEEEcCCCCccC-
Confidence 999999999999999999999998754322111111 1222 667788999999999999986 99999999999998
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCCCCC
Q 011049 432 FPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNTS 488 (494)
Q Consensus 432 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 488 (494)
+.++.+++++|++.++++++++||+++|.+...+....+++.+.+||+++|+....
T Consensus 675 -~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~~ 730 (740)
T 4a5s_A 675 -FQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFSLPAA 730 (740)
T ss_dssp -THHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHTTCC--
T ss_pred -HHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHHHHHHHHcCCCCC
Confidence 99999999999999999999999999999866677788999999999999986543
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-43 Score=369.35 Aligned_cols=416 Identities=17% Similarity=0.182 Sum_probs=307.9
Q ss_pred ceeeeccCCCCC-CC---CCeecccc-ccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccccc
Q 011049 18 DIIYTQPAEPAE-GE---KPEILHKL-DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 18 ~~i~~~~~~~~~-~~---~~~~lt~~-~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~ 92 (494)
..||++++ + ++ +.++++.. ......|+|||||+ |+|++.+++ ..+||+++++++ +.++++......
T Consensus 217 ~~i~~~d~---~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~-~~~l~~~~~~~~--~~~~l~~~~~~~-- 287 (662)
T 3azo_A 217 TELKTARV---TEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTG-WWNLHRVDPATG--AATQLCRREEEF-- 287 (662)
T ss_dssp EEEEEEEE---CTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTTS-SCEEEEECTTTC--CEEESSCCSSBS--
T ss_pred cEEEEEEE---CCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCCC-CeEEEEEECCCC--ceeecccccccc--
Confidence 47999998 6 35 67777765 45667899999999 888887654 458999999877 777777654332
Q ss_pred CCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCC
Q 011049 93 SDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQG 172 (494)
Q Consensus 93 ~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~ 172 (494)
..|. |+|+...+++.. ++..++... . ...+|+++|+++++.+.+....+.
T Consensus 288 ---~~p~--w~~~~~~~~~~~-----~~~~~~~~~-----~-~~~~l~~~d~~~~~~~~l~~~~~~-------------- 337 (662)
T 3azo_A 288 ---AGPL--WTPGMRWFAPLA-----NGLIAVVHG-----K-GAAVLGILDPESGELVDAAGPWTE-------------- 337 (662)
T ss_dssp ---SCCC--CSTTCCSEEECT-----TSCEEEEEB-----S-SSCEEEEEETTTTEEEECCSSCCE--------------
T ss_pred ---cCcc--ccccCceEeEeC-----CCEEEEEEE-----c-CccEEEEEECCCCcEEEecCCCCe--------------
Confidence 2333 555433333321 011111111 1 234699999998877666443221
Q ss_pred cccc-cccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCCC-CcccccccEEEEEEcCCCceEEEEEEeCCCCC--
Q 011049 173 EEDI-NLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPY-PTLASLQKEMIKYQRKDGVPLTATLYLPPGYD-- 248 (494)
Q Consensus 173 ~~~~-s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~~~~~-~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~-- 248 (494)
-..+ +++++.+++...+...|.++|.+++++++.++|+..+... ........+.+.+++.+|.+++++++.|+++.
T Consensus 338 ~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~ 417 (662)
T 3azo_A 338 WAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHTDPVDPAYYPEPQIRTFTAPDGREIHAHIYPPHSPDFT 417 (662)
T ss_dssp EEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCCCSSCGGGSCCCEEEEEECTTSCEEEEEEECCCCSSEE
T ss_pred EEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCCcccCCccccCcceEEEEEcCCCCEEEEEEECCCCcccc
Confidence 0134 7788889998888889999999999999888887665432 22223357899999889999999999998754
Q ss_pred CCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCC---CchhHHHHH
Q 011049 249 QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP---NDRFVEQLV 325 (494)
Q Consensus 249 ~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~---~~~~~~~~~ 325 (494)
....+++|+||++||++..... .......+.|+++||+|+.++++++.++|.++. ...+....+
T Consensus 418 ~~~~~~~p~vv~~HG~~~~~~~-------------~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~~~~~~~~~~~~~~~~ 484 (662)
T 3azo_A 418 GPADELPPYVVMAHGGPTSRVP-------------AVLDLDVAYFTSRGIGVADVNYGGSTGYGRAYRERLRGRWGVVDV 484 (662)
T ss_dssp CCTTCCCCEEEEECSSSSSCCC-------------CSCCHHHHHHHTTTCEEEEEECTTCSSSCHHHHHTTTTTTTTHHH
T ss_pred CCCCCCccEEEEECCCCCccCc-------------ccchHHHHHHHhCCCEEEEECCCCCCCccHHHHHhhccccccccH
Confidence 0012348999999998643210 112245678899999999999998877776532 122334558
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC----CCCcc-----ccccccc
Q 011049 326 SSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT----PFGFQ-----TEFRTLW 396 (494)
Q Consensus 326 ~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~----~~~~~-----~~~~~~~ 396 (494)
+|+.+++++|++++.+|++||+|+|||+||+++++++.+ |++|+++|+.+|+.+.... ...+. ...+...
T Consensus 485 ~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (662)
T 3azo_A 485 EDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLGWADGGTHDFESRYLDFLIGSFE 563 (662)
T ss_dssp HHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHHHHTTCSCGGGTTHHHHHTCCTT
T ss_pred HHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHHHhcccccchhhHhHHHHhCCCc
Confidence 899999999999998999999999999999999999887 8999999999998763110 00000 0112223
Q ss_pred ccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHH
Q 011049 397 EATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETD 476 (494)
Q Consensus 397 ~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 476 (494)
+..+.|...+|+.++.++++|+|++||++|.+|| +.++++++++|++.+++++++++++++|.+...+.....++.+.
T Consensus 564 ~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 641 (662)
T 3azo_A 564 EFPERYRDRAPLTRADRVRVPFLLLQGLEDPVCP--PEQCDRFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAEL 641 (662)
T ss_dssp TCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSC--THHHHHHHHHHTTSCCCEEEEEETTCCSSCCSHHHHHHHHHHHH
T ss_pred cchhHHHhhChHhHhccCCCCEEEEeeCCCCCCC--HHHHHHHHHHHHHcCCCEEEEEECCCCCCCCChHHHHHHHHHHH
Confidence 5667888899999999999999999999999998 99999999999999999999999999999876667778999999
Q ss_pred HHHHHhcCCCCC
Q 011049 477 RWLQKYCLSNTS 488 (494)
Q Consensus 477 ~fl~~~l~~~~~ 488 (494)
+||.++|+....
T Consensus 642 ~fl~~~l~~~~~ 653 (662)
T 3azo_A 642 SLYAQVFGVEVA 653 (662)
T ss_dssp HHHHHHTTCCCC
T ss_pred HHHHHHhCCCCC
Confidence 999999986543
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=363.58 Aligned_cols=446 Identities=16% Similarity=0.114 Sum_probs=308.2
Q ss_pred ceeeeccCCCCCCCCCeec-cccccccccceecCCCceEEEEeeee---------ccceEEEEEcCCCCCCCceEeeecc
Q 011049 18 DIIYTQPAEPAEGEKPEIL-HKLDLRFRSVSWCDDSLALVNETWYK---------TSQTRTWLVCPGSKDVAPRVLFDRV 87 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~l-t~~~~~~~~p~wspDg~~i~f~~~~~---------~~~~~~~~~~~~~g~~~~~~lt~~~ 87 (494)
..||++|+ ++++..+. .........++|||||+.|+|++... ....+||+++++++..+.++++...
T Consensus 147 ~~i~v~dl---~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~ 223 (695)
T 2bkl_A 147 AVLHVIDV---DSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERT 223 (695)
T ss_dssp CEEEEEET---TTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCC
T ss_pred EEEEEEEC---CCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecC
Confidence 47999999 77776512 11222236899999999999998633 1367899999998733355666554
Q ss_pred cccccCCCCCCceeeCCCCCEEEEEEeccCc------------------------------cceEEEEccCCCCCCCCCC
Q 011049 88 FENVYSDPGSPMMTRTSTGTNVIAKIKKEND------------------------------EQIYILLNGRGFTPEGNIP 137 (494)
Q Consensus 88 ~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~------------------------------~~~~~~~~~~g~~~~~~~~ 137 (494)
....+. .. ..|||||++|++.+..... .+. +++..+. .....
T Consensus 224 ~~~~~~--~~--~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~g~-l~~~s~~---~~~~~ 295 (695)
T 2bkl_A 224 GDPTTF--LQ--SDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHAWKDR-FYVLTDE---GAPRQ 295 (695)
T ss_dssp CCTTCE--EE--EEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEEETTE-EEEEECT---TCTTC
T ss_pred CCCEEE--EE--EEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEecCCc-EEEEECC---CCCCC
Confidence 321100 12 2399999999998754310 011 2221111 11133
Q ss_pred ceEeeecCCCce---EEEEeeC------------cchhhh----h--eeee----------ccC--C---CcccccccCc
Q 011049 138 FLDLFDINTGSK---ERIWESN------------REKYFE----T--AVAL----------VFG--Q---GEEDINLNQL 181 (494)
Q Consensus 138 ~l~~~d~~~g~~---~~l~~~~------------~~~~~~----~--~~~~----------~s~--~---~~~~~s~d~~ 181 (494)
.|+++|+++++. +.+.... +.+++. . .+.+ +.. . ...++++|+.
T Consensus 296 ~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~ 375 (695)
T 2bkl_A 296 RVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLD 375 (695)
T ss_dssp EEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCS
T ss_pred EEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCC
Confidence 588888877652 3333211 111110 0 0000 110 1 1146778999
Q ss_pred EEEEEEecCCCCCeEEEEEcCCCceeEeecCCCCCCcccccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEe
Q 011049 182 KILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWA 261 (494)
Q Consensus 182 ~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~ 261 (494)
.++++.++...|+++|++++.+++.+.++..+.. .....+..+.+.+++.||.+++++++.|+++.+. ++.|+||++
T Consensus 376 ~l~~~~ss~~~P~~v~~~d~~~g~~~~l~~~~~~-~~~~~~~~~~~~~~~~dg~~i~~~~~~p~~~~~~--~~~p~vl~~ 452 (695)
T 2bkl_A 376 DAYYVFTSFTTPRQIYKTSVSTGKSELWAKVDVP-MNPEQYQVEQVFYASKDGTKVPMFVVHRKDLKRD--GNAPTLLYG 452 (695)
T ss_dssp EEEEEEEETTEEEEEEEEETTTCCEEEEEECCCS-SCGGGEEEEEEEEECTTSCEEEEEEEEETTCCCS--SCCCEEEEC
T ss_pred EEEEEEcCCCCCCEEEEEECCCCcEEEEecCCCC-CCHHHCeEEEEEEECCCCCEEEEEEEECCCCCCC--CCccEEEEE
Confidence 9999999999999999999998887777765433 2334467899999999999999999999986443 348999999
Q ss_pred cCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCC---CCchhHHHHHHHHHHHHHHHHHc
Q 011049 262 YPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL---PNDRFVEQLVSSAEAAVEEVVRR 338 (494)
Q Consensus 262 hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~---~~~~~~~~~~~d~~~~v~~l~~~ 338 (494)
|||+.....+ .|. ...+.|+++||+|+.++.+|..++|..+ .........++|+.+++++|+++
T Consensus 453 hGg~~~~~~~---------~~~----~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 519 (695)
T 2bkl_A 453 YGGFNVNMEA---------NFR----SSILPWLDAGGVYAVANLRGGGEYGKAWHDAGRLDKKQNVFDDFHAAAEYLVQQ 519 (695)
T ss_dssp CCCTTCCCCC---------CCC----GGGHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHT
T ss_pred CCCCccccCC---------CcC----HHHHHHHhCCCEEEEEecCCCCCcCHHHHHhhHhhcCCCcHHHHHHHHHHHHHc
Confidence 9986432110 122 2344688999999999998876666542 11223456689999999999999
Q ss_pred CCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCC-----Cccccccccc--ccHHHHHhcCccccc
Q 011049 339 GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF-----GFQTEFRTLW--EATNVYIEMSPITHA 411 (494)
Q Consensus 339 ~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~~~sp~~~~ 411 (494)
+.+|++||+|+|+|+||+++++++.++|++|+++|+.+|+.+...... .+..+.+.+. +..+.+...||+.++
T Consensus 520 ~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~ 599 (695)
T 2bkl_A 520 KYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFGSGRTWIPEYGTAEKPEDFKTLHAYSPYHHV 599 (695)
T ss_dssp TSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGCC
T ss_pred CCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccccCCCcchHHHhCCCCCHHHHHHHHhcChHhhh
Confidence 999999999999999999999999999999999999999987532110 0011111111 122356678999999
Q ss_pred cCCC--CCEEEEecCCCCCCCCCHHHHHHHHHHHHh---CCCcEEEEEcCCCCCccCC-cccHHHHHHHHHHHHHHhcCC
Q 011049 412 NKIK--KPILIIHGEVDDKVGLFPMQAERFFDALKG---HGALSRLVLLPFEHHVYAA-RENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 412 ~~~~--~P~li~~G~~D~~v~~~~~~~~~~~~~l~~---~g~~~~~~~~~~~~H~~~~-~~~~~~~~~~~~~fl~~~l~~ 485 (494)
.+++ +|+|++||++|.+|| +.++.+++++|++ .+.+++++++++++|++.. .......+..+++||.++|+.
T Consensus 600 ~~~~~~~P~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 677 (695)
T 2bkl_A 600 RPDVRYPALLMMAADHDDRVD--PMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIESSVDLYSFLFQVLDV 677 (695)
T ss_dssp CSSCCCCEEEEEEETTCSSSC--THHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhcCCCCCEEEEeeCCCCCCC--hHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 9876 799999999999998 9999999999998 6789999999999999864 234567888899999999987
Q ss_pred CCCCCCC
Q 011049 486 NTSDGKC 492 (494)
Q Consensus 486 ~~~~~~~ 492 (494)
...+..|
T Consensus 678 ~~~~~~~ 684 (695)
T 2bkl_A 678 QGAQGGV 684 (695)
T ss_dssp -------
T ss_pred CCCCcch
Confidence 6665554
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-43 Score=367.04 Aligned_cols=408 Identities=14% Similarity=0.106 Sum_probs=302.7
Q ss_pred ceeeeccCCCCCCC--CCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCc---eEeeeccccccc
Q 011049 18 DIIYTQPAEPAEGE--KPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAP---RVLFDRVFENVY 92 (494)
Q Consensus 18 ~~i~~~~~~~~~~~--~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~---~~lt~~~~~~~~ 92 (494)
..||++++ +++ +.++|+........+ |+|||++|+|.++++..+.+|++++++++ +. +.++.+...
T Consensus 259 ~~i~~~d~---~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~--~~~~~~~l~~~~~~--- 329 (693)
T 3iuj_A 259 NRLYVKDL---SQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANP--GPAHWRDLIPERQQ--- 329 (693)
T ss_dssp CEEEEEET---TSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSC--CGGGCEEEECCCSS---
T ss_pred cEEEEEEC---CCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCC--CccccEEEecCCCC---
Confidence 58999998 544 677787665444444 99999999999886555689999999976 44 556554322
Q ss_pred CCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCC
Q 011049 93 SDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQG 172 (494)
Q Consensus 93 ~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~ 172 (494)
.+ .|||+|++|++.... ....+|+++|++++..+.+..+... .. .
T Consensus 330 -----~~-~~s~~g~~lv~~~~~------------------~g~~~l~~~d~~g~~~~~l~~p~~~-----~~------~ 374 (693)
T 3iuj_A 330 -----VL-TVHSGSGYLFAEYMV------------------DATARVEQFDYEGKRVREVALPGLG-----SV------S 374 (693)
T ss_dssp -----CE-EEEEETTEEEEEEEE------------------TTEEEEEEECTTSCEEEEECCSSSS-----EE------E
T ss_pred -----EE-EEEEECCEEEEEEEE------------------CCeeEEEEEECCCCeeEEeecCCCc-----eE------E
Confidence 12 489999999998742 1223588999987766555433211 01 1
Q ss_pred cccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCCCCcccccccEEEEEEcCCCceEEEEEEeCCCCCCCCC
Q 011049 173 EEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKD 252 (494)
Q Consensus 173 ~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~ 252 (494)
..++++|+..+++..++...|+++|.+++++++.+.++..+... ....+.++.+.+++.||.+|++++++|++..+.
T Consensus 375 ~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~~~~~~~-~~~~~~~~~~~~~~~dg~~i~~~l~~p~~~~~~-- 451 (693)
T 3iuj_A 375 GFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYRASAAPF-KPEDYVSEQRFYQSKDGTRVPLIISYRKGLKLD-- 451 (693)
T ss_dssp ECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEECCCSSC-CGGGEEEEEEEEECTTSCEEEEEEEEESSCCCS--
T ss_pred eeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEEeCCCCc-ChhhCeeEEEEEecCCCcEEEEEEEecCCCCCC--
Confidence 12567888999999999999999999999888888887655432 334567899999999999999999999986443
Q ss_pred CCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCC---CchhHHHHHHHHH
Q 011049 253 GPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP---NDRFVEQLVSSAE 329 (494)
Q Consensus 253 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~---~~~~~~~~~~d~~ 329 (494)
++.|+||++|||+..... ..| ....+.|+++||+|+.++.||..++|..+. ........++|+.
T Consensus 452 ~~~P~ll~~hGg~~~~~~---------~~~----~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~ 518 (693)
T 3iuj_A 452 GSNPTILYGYGGFDVSLT---------PSF----SVSVANWLDLGGVYAVANLRGGGEYGQAWHLAGTQQNKQNVFDDFI 518 (693)
T ss_dssp SCCCEEEECCCCTTCCCC---------CCC----CHHHHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHH
T ss_pred CCccEEEEECCCCCcCCC---------Ccc----CHHHHHHHHCCCEEEEEeCCCCCccCHHHHHhhhhhcCCCcHHHHH
Confidence 348999999998632211 112 234568899999999999998777765422 1233345689999
Q ss_pred HHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCC-----Cccccccccccc---HHH
Q 011049 330 AAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF-----GFQTEFRTLWEA---TNV 401 (494)
Q Consensus 330 ~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~-----~~~~~~~~~~~~---~~~ 401 (494)
+++++|++++.+|++||+|+|+|+||++++.++.++|++|+++|+.+|+.+...... .+..+.+.+... .+.
T Consensus 519 ~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~ 598 (693)
T 3iuj_A 519 AAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHTFTAGTGWAYDYGTSADSEAMFDY 598 (693)
T ss_dssp HHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGGSGGGGGCHHHHCCTTSCHHHHHH
T ss_pred HHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhccCCCchhHHHHcCCccCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988532211 011111222111 234
Q ss_pred HHhcCccccccC-CCCC-EEEEecCCCCCCCCCHHHHHHHHHHHHhC---CCcEEEEEcCCCCCccCCc-ccHHHHHHHH
Q 011049 402 YIEMSPITHANK-IKKP-ILIIHGEVDDKVGLFPMQAERFFDALKGH---GALSRLVLLPFEHHVYAAR-ENVMHVIWET 475 (494)
Q Consensus 402 ~~~~sp~~~~~~-~~~P-~li~~G~~D~~v~~~~~~~~~~~~~l~~~---g~~~~~~~~~~~~H~~~~~-~~~~~~~~~~ 475 (494)
+...||+.++.+ +++| +||+||++|.+|| +.++.+++++|++. +++++++++++++|++... ......+..+
T Consensus 599 ~~~~sp~~~~~~~~~~Pp~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 676 (693)
T 3iuj_A 599 LKGYSPLHNVRPGVSYPSTMVTTADHDDRVV--PAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQSADI 676 (693)
T ss_dssp HHHHCHHHHCCTTCCCCEEEEEEESSCSSSC--THHHHHHHHHHHHHCCSSSCEEEEEEC-------CHHHHHHHHHHHH
T ss_pred HHhcCHHHhhcccCCCCceeEEecCCCCCCC--hhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHHHHH
Confidence 667899999999 8987 9999999999998 99999999999987 5899999999999998753 4566788899
Q ss_pred HHHHHHhcCCCC
Q 011049 476 DRWLQKYCLSNT 487 (494)
Q Consensus 476 ~~fl~~~l~~~~ 487 (494)
.+||.++|+...
T Consensus 677 ~~fl~~~l~~~~ 688 (693)
T 3iuj_A 677 YAFTLYEMGYRE 688 (693)
T ss_dssp HHHHHHHTTCSS
T ss_pred HHHHHHHcCCCC
Confidence 999999998653
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=362.73 Aligned_cols=407 Identities=16% Similarity=0.124 Sum_probs=294.2
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
.+.+.++++ ++++.++++.... ..++|||||+.|+|.+...+....||+++++++ +.++|+...+.. .
T Consensus 131 ~~~~~l~d~---~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g--~~~~l~~~~~~~-----~ 198 (582)
T 3o4h_A 131 EDRVALYAL---DGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSG--GLRVFDSGEGSF-----S 198 (582)
T ss_dssp SSCEEEEEE---ETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTC--CCEEECCSSCEE-----E
T ss_pred CCCceEEEc---cCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCC--CceEeecCCCcc-----c
Confidence 445557777 7788888887665 788999999999998876443467999999988 778887665443 3
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEE-------------------EeeCc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI-------------------WESNR 157 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l-------------------~~~~~ 157 (494)
.|. |||||++|+ .... . ...+|+++|+++++.+.+ |.+++
T Consensus 199 ~~~--~SpDG~~l~-~~~~-~-----------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg 257 (582)
T 3o4h_A 199 SAS--ISPGMKVTA-GLET-A-----------------REARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDG 257 (582)
T ss_dssp EEE--ECTTSCEEE-EEEC-S-----------------SCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTS
T ss_pred cce--ECCCCCEEE-EccC-C-----------------CeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCC
Confidence 444 999999998 3321 0 011244555544443311 22222
Q ss_pred chhhh----heeeecc-------CC---CcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCCCCc---cc
Q 011049 158 EKYFE----TAVALVF-------GQ---GEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPT---LA 220 (494)
Q Consensus 158 ~~~~~----~~~~~~s-------~~---~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~~~~~~~---~~ 220 (494)
.+++. +...+.. .. ...+|+ |+ .++++.++...|+++|+++.++ +.++| .... ..
T Consensus 258 ~~~~~~~~~g~~~l~~~g~~~~~~~~~v~~~~~s-dg-~~l~~~s~~~~p~~l~~~d~~~-~~~~l-----~~~~~~~~~ 329 (582)
T 3o4h_A 258 RLAVVARREGRSAVFIDGERVEAPQGNHGRVVLW-RG-KLVTSHTSLSTPPRIVSLPSGE-PLLEG-----GLPEDLRRS 329 (582)
T ss_dssp CEEEEEEETTEEEEEETTEEECCCSSEEEEEEEE-TT-EEEEEEEETTEEEEEEEETTCC-EEECC-----CCCHHHHHT
T ss_pred cEEEEEEcCCcEEEEEECCeeccCCCceEEEEec-CC-EEEEEEcCCCCCCeEEEEcCCC-ceEEE-----ecCCccccc
Confidence 11110 0000000 00 124667 65 4557777788899999998765 44444 1222 33
Q ss_pred ccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEE
Q 011049 221 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 300 (494)
Q Consensus 221 ~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 300 (494)
....+.+++++.+|.+++++++.|++..+ ++|+||++||+++... ...| ......|+++||.|
T Consensus 330 ~~~~~~~~~~~~~g~~i~~~~~~p~~~~~----~~p~vv~~HG~~~~~~---------~~~~----~~~~~~l~~~G~~v 392 (582)
T 3o4h_A 330 IAGSRLVWVESFDGSRVPTYVLESGRAPT----PGPTVVLVHGGPFAED---------SDSW----DTFAASLAAAGFHV 392 (582)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEETTSCS----SEEEEEEECSSSSCCC---------CSSC----CHHHHHHHHTTCEE
T ss_pred cCcceEEEEECCCCCEEEEEEEcCCCCCC----CCcEEEEECCCccccc---------cccc----CHHHHHHHhCCCEE
Confidence 44688999999999999999999987543 4899999999874321 1112 34667889999999
Q ss_pred EeCCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCC
Q 011049 301 LAGPSIPIIGEGDKLP---NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 377 (494)
Q Consensus 301 ~~~~~~~~~g~g~~~~---~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 377 (494)
++++++++.++|.++. ...+....++|+.++++++.+++.+| |++|+|||+||++++.++.++|++|+++|+.+|
T Consensus 393 ~~~d~rG~~~~G~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~ 470 (582)
T 3o4h_A 393 VMPNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGLFKAGVAGAS 470 (582)
T ss_dssp EEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHSTTTSSCEEEESC
T ss_pred EEeccCCCCCCchhHHhhhhhhcccccHHHHHHHHHHHHhCCCcc--eEEEEEECHHHHHHHHHHhcCCCceEEEEEcCC
Confidence 9999988777776522 12233456899999999999998777 999999999999999999999999999999999
Q ss_pred CCCCCCCC----CCcc-cccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEE
Q 011049 378 SYNKTLTP----FGFQ-TEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRL 452 (494)
Q Consensus 378 ~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~ 452 (494)
+.+..... ..+. ......-...+.+...+|+.++.++++|+|++||++|.+|| +.++++++++|++.++++++
T Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~g~~~~~ 548 (582)
T 3o4h_A 471 VVDWEEMYELSDAAFRNFIEQLTGGSREIMRSRSPINHVDRIKEPLALIHPQNASRTP--LKPLLRLMGELLARGKTFEA 548 (582)
T ss_dssp CCCHHHHHHTCCHHHHHHHHHHTTTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCEEE
T ss_pred ccCHHHHhhcccchhHHHHHHHcCcCHHHHHhcCHHHHHhcCCCCEEEEecCCCCCcC--HHHHHHHHHHHHhCCCCEEE
Confidence 87632100 0000 00000014667788999999999999999999999999998 99999999999999999999
Q ss_pred EEcCCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 453 VLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 453 ~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
+++|+++|.+...+....+++.+.+||+++|++
T Consensus 549 ~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~l~~ 581 (582)
T 3o4h_A 549 HIIPDAGHAINTMEDAVKILLPAVFFLATQRER 581 (582)
T ss_dssp EEETTCCSSCCBHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEECCCCCCCCChHHHHHHHHHHHHHHHHHcCC
Confidence 999999999886677788999999999999975
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=357.74 Aligned_cols=444 Identities=15% Similarity=0.145 Sum_probs=307.9
Q ss_pred eeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeec------------cceEEEEEcCCCCCCCceEeeec
Q 011049 19 IIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT------------SQTRTWLVCPGSKDVAPRVLFDR 86 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~------------~~~~~~~~~~~~g~~~~~~lt~~ 86 (494)
.||++|+ ++++..+++........++|||||+.|+|.+.... ...+||+++++++..+.+.++..
T Consensus 152 ~i~v~d~---~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~ 228 (710)
T 2xdw_A 152 TIKFMKV---DGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEF 228 (710)
T ss_dssp EEEEEET---TTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECC
T ss_pred EEEEEEC---CCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEecc
Confidence 8999999 88888776665555678999999999999885321 24679999998763334555554
Q ss_pred ccccccCCCCCCceeeCCCCCEEEEEEeccCc-cceEEE-----------------------------EccCCC------
Q 011049 87 VFENVYSDPGSPMMTRTSTGTNVIAKIKKEND-EQIYIL-----------------------------LNGRGF------ 130 (494)
Q Consensus 87 ~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~-~~~~~~-----------------------------~~~~g~------ 130 (494)
.....+ .....|||||++|++.+..... .....+ ++.+|.
T Consensus 229 ~~~~~~----~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s 304 (710)
T 2xdw_A 229 PDEPKW----MGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKT 304 (710)
T ss_dssp TTCTTC----EEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEE
T ss_pred CCCCeE----EEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEE
Confidence 321110 0112399999999998752210 001111 111111
Q ss_pred CCCCCCCceEeeecCCCc---eEEEEee-------------Ccchhhh----h--eeeeccC-CC--------------c
Q 011049 131 TPEGNIPFLDLFDINTGS---KERIWES-------------NREKYFE----T--AVALVFG-QG--------------E 173 (494)
Q Consensus 131 ~~~~~~~~l~~~d~~~g~---~~~l~~~-------------~~~~~~~----~--~~~~~s~-~~--------------~ 173 (494)
.....+..|+++|+++++ .+.+... .+.+++. . .+.+++. ++ .
T Consensus 305 ~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~ 384 (710)
T 2xdw_A 305 NRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVG 384 (710)
T ss_dssp CTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEE
T ss_pred CCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEE
Confidence 001113358888888764 2333221 1111110 0 1111111 11 1
Q ss_pred ccccccCcEEEEEEecCCCCCeEEEEEcCCCc--eeEeecCCCCCCcccccccEEEEEEcCCCceEEEEEEeCCCCCCCC
Q 011049 174 EDINLNQLKILTSKESKTEITQYHILSWPLKK--SSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSK 251 (494)
Q Consensus 174 ~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~--~~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~ 251 (494)
.++++++..++++.++...|+++|.+++.+++ .+.+............+..+.+.+++.||.+|++++++|+++...
T Consensus 385 ~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~~~~p~~~~~~- 463 (710)
T 2xdw_A 385 YSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLD- 463 (710)
T ss_dssp EECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEEEECCCTTCCGGGEEEEEEEEECTTSCEEEEEEEEETTCCCS-
T ss_pred EecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEeeecccCCcCccccEEEEEEEEcCCCCEEEEEEEecCCCCCC-
Confidence 35678888999999999999999999998877 566655332212334567899999999999999999999986443
Q ss_pred CCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEEeCCCCCCCCCCCCCC---CchhHHHHHHH
Q 011049 252 DGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDKLP---NDRFVEQLVSS 327 (494)
Q Consensus 252 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g~~~~---~~~~~~~~~~d 327 (494)
++.|+||++||++..... ..| ......|++ +||+|++++.+|..++|..+. ........++|
T Consensus 464 -~~~P~vl~~hGg~~~~~~---------~~~----~~~~~~l~~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D 529 (710)
T 2xdw_A 464 -GSHPAFLYGYGGFNISIT---------PNY----SVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDD 529 (710)
T ss_dssp -SCSCEEEECCCCTTCCCC---------CCC----CHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHTTSGGGTHHHHHH
T ss_pred -CCccEEEEEcCCCCCcCC---------Ccc----cHHHHHHHHhCCcEEEEEccCCCCCCChHHHHhhhhhcCCchHHH
Confidence 348999999998643211 011 123456778 999999999988766654321 12233456899
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCC-C----cccccccc--cccHH
Q 011049 328 AEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF-G----FQTEFRTL--WEATN 400 (494)
Q Consensus 328 ~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~-~----~~~~~~~~--~~~~~ 400 (494)
+.+++++|++++++|++||+|+|+|+||+++++++.++|++|+++|+.+|+.+...... . +..+.+.+ .+..+
T Consensus 530 ~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~ 609 (710)
T 2xdw_A 530 FQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYGCSDSKQHFE 609 (710)
T ss_dssp HHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHHHHCCTTSHHHHH
T ss_pred HHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccccCCChhHHHhCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999987532111 0 11111111 12234
Q ss_pred HHHhcCcccccc-----CCCC-CEEEEecCCCCCCCCCHHHHHHHHHHHHhC-------CCcEEEEEcCCCCCccCCcc-
Q 011049 401 VYIEMSPITHAN-----KIKK-PILIIHGEVDDKVGLFPMQAERFFDALKGH-------GALSRLVLLPFEHHVYAARE- 466 (494)
Q Consensus 401 ~~~~~sp~~~~~-----~~~~-P~li~~G~~D~~v~~~~~~~~~~~~~l~~~-------g~~~~~~~~~~~~H~~~~~~- 466 (494)
.+...+|+.++. ++++ |+||+||++|.+|| +.++.+++++|++. +.+++++++++++|++....
T Consensus 610 ~~~~~sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 687 (710)
T 2xdw_A 610 WLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVV--PLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTA 687 (710)
T ss_dssp HHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSC--THHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHH
T ss_pred HHHHhCcHhhhcccccccCCCCcEEEEEeCCCCccC--hhHHHHHHHHHHhhhccccCCCcCEEEEEeCCCCcCCCCCHH
Confidence 566789999998 7886 99999999999998 99999999999987 89999999999999987542
Q ss_pred cHHHHHHHHHHHHHHhcCCC
Q 011049 467 NVMHVIWETDRWLQKYCLSN 486 (494)
Q Consensus 467 ~~~~~~~~~~~fl~~~l~~~ 486 (494)
.....+..+.+||.++|+..
T Consensus 688 ~~~~~~~~~~~fl~~~l~~~ 707 (710)
T 2xdw_A 688 KVIEEVSDMFAFIARCLNID 707 (710)
T ss_dssp HHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHcCCc
Confidence 34678889999999999754
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-41 Score=352.36 Aligned_cols=438 Identities=13% Similarity=0.074 Sum_probs=293.7
Q ss_pred ceeeeccCCCCCCCCCe--eccc--cccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCc--eEeeecccccc
Q 011049 18 DIIYTQPAEPAEGEKPE--ILHK--LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAP--RVLFDRVFENV 91 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~--~lt~--~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~--~~lt~~~~~~~ 91 (494)
.+||+.++ .++..+ .+.. .......+.|||||++|+|.+.... ..+||+++++++..+. +.++...
T Consensus 247 ~~v~~~~l---gt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-~~~l~~~d~~~~~~~~~~~~l~~~~---- 318 (751)
T 2xe4_A 247 NKVWRHVM---GKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPE-TAEVHLLDLRKGNAHNTLEIVRPRE---- 318 (751)
T ss_dssp EEEEEEET---TSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSS-CEEEEEEESSSCTTCCCEEESSCCC----
T ss_pred CEEEEEEC---CCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCC-CceEEEEECCCCCCCceeEEeecCC----
Confidence 47999888 555432 3322 2233457899999999999987554 7899999998763355 6666433
Q ss_pred cCCCCCCceeeCCC---CCEEEEEEecc-CccceEEEEccCC-CCCCC----C--CCceEeeecCCCceEEEEeeCcc--
Q 011049 92 YSDPGSPMMTRTST---GTNVIAKIKKE-NDEQIYILLNGRG-FTPEG----N--IPFLDLFDINTGSKERIWESNRE-- 158 (494)
Q Consensus 92 ~~~~~~~~~~~spD---G~~i~~~~~~~-~~~~~~~~~~~~g-~~~~~----~--~~~l~~~d~~~g~~~~l~~~~~~-- 158 (494)
..+. |+|| |++++|.++.. ......+.++.++ ..... . ...+..+++.++..-.....++.
T Consensus 319 ----~~~~--~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~ 392 (751)
T 2xe4_A 319 ----KGVR--YDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTR 392 (751)
T ss_dssp ----TTCC--EEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEE
T ss_pred ----CCce--EEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEE
Confidence 2233 6777 99999988653 2222222333221 01000 0 00111222222111100111110
Q ss_pred hhh----------h-he-eeecc--CCC-cccc------cccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCC-C
Q 011049 159 KYF----------E-TA-VALVF--GQG-EEDI------NLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHP-Y 216 (494)
Q Consensus 159 ~~~----------~-~~-~~~~s--~~~-~~~~------s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~~~~-~ 216 (494)
++. . +. ...+. ..+ ...+ ++++..++++.+++..|+++|.+++.+++.+.|+..+.. .
T Consensus 393 l~~~dl~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~~~~~~~~ 472 (751)
T 2xe4_A 393 IWTMMADSQDGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVKVREVGGG 472 (751)
T ss_dssp EEEEECCTTTSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEEECCCCTT
T ss_pred EEEEecccccccccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEeccccccC
Confidence 000 0 00 00111 001 1122 457888999999999999999999988888888765432 1
Q ss_pred CcccccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhC
Q 011049 217 PTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR 296 (494)
Q Consensus 217 ~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 296 (494)
.....+..+.+++++.||.+|++++++|++..+. +++|+||++|||+..... ..|. ...+.|+++
T Consensus 473 ~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~--~~~P~vl~~HGg~~~~~~---------~~~~----~~~~~l~~~ 537 (751)
T 2xe4_A 473 FDAANYKVERRFATAPDQTKIPLSVVYHKDLDMS--QPQPCMLYGYGSYGLSMD---------PQFS----IQHLPYCDR 537 (751)
T ss_dssp CCGGGEEEEEEEEECTTCCEEEEEEEEETTSCTT--SCCCEEEECCCCTTCCCC---------CCCC----GGGHHHHTT
T ss_pred CCccceEEEEEEEECCCCcEEEEEEEcCCCCCCC--CCccEEEEECCCCCcCCC---------Ccch----HHHHHHHhC
Confidence 2233456899999999999999999999886433 348999999998632211 1122 245578999
Q ss_pred CeEEEeCCCCCCCCCCCCCC----CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEE
Q 011049 297 RFAVLAGPSIPIIGEGDKLP----NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCG 372 (494)
Q Consensus 297 G~~v~~~~~~~~~g~g~~~~----~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~ 372 (494)
||+|+.++.+|+.++|..+. ...+....++|+.+++++|++++++|++||+|+|+|+||+++++++.++|++|+|+
T Consensus 538 G~~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~ 617 (751)
T 2xe4_A 538 GMIFAIAHIRGGSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVA 617 (751)
T ss_dssp TCEEEEECCTTSCTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEE
T ss_pred CcEEEEEeeCCCCCcCcchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEE
Confidence 99999999998877765421 12233467899999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCCC------CCCCc--ccccccccccH---HHHHhcCccccccCCCCC-EEEEecCCCCCCCCCHHHHHHHH
Q 011049 373 IARSGSYNKTL------TPFGF--QTEFRTLWEAT---NVYIEMSPITHANKIKKP-ILIIHGEVDDKVGLFPMQAERFF 440 (494)
Q Consensus 373 v~~~~~~~~~~------~~~~~--~~~~~~~~~~~---~~~~~~sp~~~~~~~~~P-~li~~G~~D~~v~~~~~~~~~~~ 440 (494)
|+.+|+.+... .+... ..+.+.+ .++ +.+...||+.++.++++| +||+||++|.+|| +.++.+++
T Consensus 618 v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~p-~~~~~~~~~~~~sp~~~~~~~~~Pp~Lii~G~~D~~vp--~~~~~~~~ 694 (751)
T 2xe4_A 618 LAGVPFVDVMTTMCDPSIPLTTGEWEEWGNP-NEYKYYDYMLSYSPMDNVRAQEYPNIMVQCGLHDPRVA--YWEPAKWV 694 (751)
T ss_dssp EEESCCCCHHHHHTCTTSTTHHHHTTTTCCT-TSHHHHHHHHHHCTGGGCCSSCCCEEEEEEETTCSSSC--THHHHHHH
T ss_pred EEeCCcchHHhhhcccCcccchhhHHHcCCC-CCHHHHHHHHhcChhhhhccCCCCceeEEeeCCCCCCC--HHHHHHHH
Confidence 99999877321 01000 0111122 222 345678999999999997 9999999999998 99999999
Q ss_pred HHHHhCC---CcEEEEEcCCCCCccCCcc-cHHHHHHHHHHHHHHhcCCCC
Q 011049 441 DALKGHG---ALSRLVLLPFEHHVYAARE-NVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 441 ~~l~~~g---~~~~~~~~~~~~H~~~~~~-~~~~~~~~~~~fl~~~l~~~~ 487 (494)
++|++.+ .++.+.++++++|++.... ........+.+||.++|+...
T Consensus 695 ~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l~~~~ 745 (751)
T 2xe4_A 695 SKLRECKTDNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKHLKSTV 745 (751)
T ss_dssp HHHHHHCCSCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred HHHHhcCCCCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHHhCCCc
Confidence 9999884 4567778899999987433 445667789999999997653
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-41 Score=354.07 Aligned_cols=410 Identities=16% Similarity=0.170 Sum_probs=297.9
Q ss_pred ceeeeccCCCCCCC-CCeecccccc-----ccccceecC--CCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccc
Q 011049 18 DIIYTQPAEPAEGE-KPEILHKLDL-----RFRSVSWCD--DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFE 89 (494)
Q Consensus 18 ~~i~~~~~~~~~~~-~~~~lt~~~~-----~~~~p~wsp--Dg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~ 89 (494)
..|+++|+ +++ ..+.+..... ....++||| ||+. ++++.+++ ..+||.++.+++ ..+.++.....
T Consensus 284 ~~v~~~d~---~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~-l~~~~~~g-~~~l~~~~~~~~--~~~~l~~~~~~ 356 (706)
T 2z3z_A 284 CKVNAYDA---ETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQF-IWQSRRDG-WNHLYLYDTTGR--LIRQVTKGEWE 356 (706)
T ss_dssp EEEEEEET---TTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEE-EEEECTTS-SCEEEEEETTSC--EEEECCCSSSC
T ss_pred eEEEEEEC---CCCceeeEEEEccCCCeECccCCceeecCCCCEE-EEEEccCC-ccEEEEEECCCC--EEEecCCCCeE
Confidence 48889988 666 4444442211 124679999 9984 55555555 578999998765 66667654322
Q ss_pred cccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeecc
Q 011049 90 NVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVF 169 (494)
Q Consensus 90 ~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s 169 (494)
. .. .+.|||||++|++..... .....+|+.+|+++++.+.+....+.
T Consensus 357 v-----~~-~~~~spdg~~l~~~~~~~----------------~~~~~~l~~~d~~~~~~~~l~~~~~~----------- 403 (706)
T 2z3z_A 357 V-----TN-FAGFDPKGTRLYFESTEA----------------SPLERHFYCIDIKGGKTKDLTPESGM----------- 403 (706)
T ss_dssp E-----EE-EEEECTTSSEEEEEESSS----------------CTTCBEEEEEETTCCCCEESCCSSSE-----------
T ss_pred E-----Ee-eeEEcCCCCEEEEEecCC----------------CCceEEEEEEEcCCCCceeccCCCce-----------
Confidence 1 11 134999999999986320 11124699999998876666532211
Q ss_pred CCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCCCCcccccccEEEEEEcCCC-ceEEEEEEeCCCCC
Q 011049 170 GQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDG-VPLTATLYLPPGYD 248 (494)
Q Consensus 170 ~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~dg-~~~~~~l~~P~~~~ 248 (494)
....|||||+.+++..++...|+++++++.++++...++..+ +.........+.+++++.+| .++.++++.|++++
T Consensus 404 --~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~ 480 (706)
T 2z3z_A 404 --HRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSHTLLEAKN-PDTGYAMPEIRTGTIMAADGQTPLYYKLTMPLHFD 480 (706)
T ss_dssp --EEEEECTTSSEEEEEEECSSCSCEEEEEESSSCEEEEEECC-------CCCCEEEEEEECTTSSSEEEEEEECCTTCC
T ss_pred --EEEEECCCCCEEEEEecCCCCCcEEEEEECCCCeEeeccccc-hhhhcCCCCcEEEEEEcCCCCEEEEEEEEeCCCCC
Confidence 134899999999999888889999999999887744444332 23333344678899999999 89999999999876
Q ss_pred CCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCC---CCchhHHHHH
Q 011049 249 QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL---PNDRFVEQLV 325 (494)
Q Consensus 249 ~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~---~~~~~~~~~~ 325 (494)
+.+ ++|+||++||++..... ...|..........|+++||.|++++.++..+++..+ ....+....+
T Consensus 481 ~~~--~~p~iv~~HGg~~~~~~--------~~~~~~~~~~~~~~la~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~ 550 (706)
T 2z3z_A 481 PAK--KYPVIVYVYGGPHAQLV--------TKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEM 550 (706)
T ss_dssp TTS--CEEEEEECCCCTTCCCC--------CSCC----CCHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTHHHH
T ss_pred CCC--CccEEEEecCCCCceee--------ccccccCchHHHHHHHhCCcEEEEEecCCCcccchhHHHHHhhccCCccH
Confidence 544 38999999998643210 0112211112466888999999998887654443221 1122334567
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcc-cccccccccHHHHHh
Q 011049 326 SSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQ-TEFRTLWEATNVYIE 404 (494)
Q Consensus 326 ~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 404 (494)
+|+.+++++|.+++.+|++|++|+|||+||++++.++.++|++|+++|+.+|+.++......+. .....++..++.|..
T Consensus 551 ~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (706)
T 2z3z_A 551 ADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRYAIMYGERYFDAPQENPEGYDA 630 (706)
T ss_dssp HHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGSBHHHHHHHHCCTTTCHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHHHHhhhhhhhcCCcccChhhhhh
Confidence 8999999999988888999999999999999999999999999999999999876432211111 111345566788888
Q ss_pred cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 405 MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 405 ~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
.+|...+.++++|+|++||++|.+|| +.++++++++|++.+++++++++|+++|.+... ....+++.+.+||+++|
T Consensus 631 ~~~~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~l 706 (706)
T 2z3z_A 631 ANLLKRAGDLKGRLMLIHGAIDPVVV--WQHSLLFLDACVKARTYPDYYVYPSHEHNVMGP-DRVHLYETITRYFTDHL 706 (706)
T ss_dssp HCGGGGGGGCCSEEEEEEETTCSSSC--THHHHHHHHHHHHHTCCCEEEEETTCCSSCCTT-HHHHHHHHHHHHHHHHC
T ss_pred CCHhHhHHhCCCCEEEEeeCCCCCCC--HHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcc-cHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999998 999999999999999999999999999998754 67788999999999885
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-41 Score=357.83 Aligned_cols=412 Identities=17% Similarity=0.212 Sum_probs=300.7
Q ss_pred cceeeeccCCCCCCCCCeecccccc-----ccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccc
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDL-----RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV 91 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~-----~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~ 91 (494)
...||++|+ ++++.++++.... ....++|||||+ +++++..++ ..+||.++++++ .+.++......
T Consensus 311 ~~~i~~~d~---~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g-~~~l~~~~~~~~---~~~l~~~~~~v- 381 (741)
T 2ecf_A 311 KLDLVEVTL---ASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTG-FQHLYRIDSKGK---AAALTHGNWSV- 381 (741)
T ss_dssp EEEEEEEET---TTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTS-SCEEEEECSSSC---EEESCCSSSCE-
T ss_pred eEEEEEEEC---CCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCC-ccEEEEEcCCCC---eeeeeecceEE-
Confidence 458999999 7788777765433 235789999999 777766555 578999998753 45665543221
Q ss_pred cCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCC
Q 011049 92 YSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQ 171 (494)
Q Consensus 92 ~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~ 171 (494)
.. +..|||||++|++.... + .....+||.++.+++..+++....+.
T Consensus 382 ----~~-~~~~s~dg~~l~~~~~~------------~----~~~~~~l~~~~~~g~~~~~l~~~~~~------------- 427 (741)
T 2ecf_A 382 ----DE-LLAVDEKAGLAYFRAGI------------E----SARESQIYAVPLQGGQPQRLSKAPGM------------- 427 (741)
T ss_dssp ----EE-EEEEETTTTEEEEEECS------------S----CTTCBEEEEEETTCCCCEECCCSCSE-------------
T ss_pred ----Ee-EeEEeCCCCEEEEEEeC------------C----CCceEEEEEEEcCCCCeeecccCCCc-------------
Confidence 11 12389999999988732 0 01133588888776656666542211
Q ss_pred CcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecCCC-----CCCcc--cccccEEEEEEcCCC-ceEEEEEEe
Q 011049 172 GEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPH-----PYPTL--ASLQKEMIKYQRKDG-VPLTATLYL 243 (494)
Q Consensus 172 ~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~~~-----~~~~~--~~~~~~~~~~~~~dg-~~~~~~l~~ 243 (494)
....|||||+.+++..++...|+++|+++.+++..+.++.... ..... .....+.+++++.|| .+++++++.
T Consensus 428 ~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~ 507 (741)
T 2ecf_A 428 HSASFARNASVYVDSWSNNSTPPQIELFRANGEKIATLVENDLADPKHPYARYREAQRPVEFGTLTAADGKTPLNYSVIK 507 (741)
T ss_dssp EEEEECTTSSEEEEEEEETTEEEEEEEEETTSCEEECSSCCCSSSTTSTTHHHHTTCCCEEEEEEECTTSSCEEEEEEEC
T ss_pred eEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCeEEEeccCcccccccchhhhhccCCCcEEEEEEcCCCCEEEEEEEEe
Confidence 1348999999999999999999999999987665555553322 11122 334689999999999 999999999
Q ss_pred CCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCc-hhHHHHHhCCeEEEeCCCCCCCCCCCCCC---Cch
Q 011049 244 PPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTP-TSSLIFLARRFAVLAGPSIPIIGEGDKLP---NDR 319 (494)
Q Consensus 244 P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~G~~v~~~~~~~~~g~g~~~~---~~~ 319 (494)
|+++++.+ ++|+||++||++.... ....|..... .....|+++||+|+++++++..+++..+. ...
T Consensus 508 P~~~~~~~--~~p~vv~~hG~~~~~~--------~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~~~ 577 (741)
T 2ecf_A 508 PAGFDPAK--RYPVAVYVYGGPASQT--------VTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRDFGGALYGK 577 (741)
T ss_dssp CSSCCTTS--CEEEEEECCCSTTCCS--------CSSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTC
T ss_pred CCCCCCCC--CcCEEEEEcCCCCccc--------ccccccccchhHHHHHHHhCCCEEEEEecCCCCCCChhhhHHHhhh
Confidence 98865443 3899999999864321 0111221100 25667889999999988876544332111 111
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcc-ccccccccc
Q 011049 320 FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQ-TEFRTLWEA 398 (494)
Q Consensus 320 ~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~-~~~~~~~~~ 398 (494)
+....+.|+.+++++|.+++.+|++||+|+|||+||++++.++.++|++|+++|+.+|+.++......+. .....++..
T Consensus 578 ~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (741)
T 2ecf_A 578 QGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGLYDSHYTERYMDLPARN 657 (741)
T ss_dssp TTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGGSBHHHHHHHHCCTGGG
T ss_pred cccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhhhccccchhhcCCcccC
Confidence 2234578999999999998888999999999999999999999999999999999999876432111111 111345566
Q ss_pred HHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHH
Q 011049 399 TNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRW 478 (494)
Q Consensus 399 ~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f 478 (494)
.+.|...+|+..+.++++|+|++||++|.++| +.++.+++++|+..+++++++++++++|.+.... ...+++.+.+|
T Consensus 658 ~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~i~~f 734 (741)
T 2ecf_A 658 DAGYREARVLTHIEGLRSPLLLIHGMADDNVL--FTNSTSLMSALQKRGQPFELMTYPGAKHGLSGAD-ALHRYRVAEAF 734 (741)
T ss_dssp HHHHHHHCSGGGGGGCCSCEEEEEETTCSSSC--THHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHH-HHHHHHHHHHH
T ss_pred hhhhhhcCHHHHHhhCCCCEEEEccCCCCCCC--HHHHHHHHHHHHHCCCceEEEEECCCCCCCCCCc-hhHHHHHHHHH
Confidence 77888889999999999999999999999998 9999999999999999999999999999987433 36888999999
Q ss_pred HHHhcC
Q 011049 479 LQKYCL 484 (494)
Q Consensus 479 l~~~l~ 484 (494)
|+++|+
T Consensus 735 l~~~l~ 740 (741)
T 2ecf_A 735 LGRCLK 740 (741)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 999986
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-39 Score=343.26 Aligned_cols=411 Identities=13% Similarity=0.063 Sum_probs=290.0
Q ss_pred cceeeeccCCCCCCC--C-CeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 17 RDIIYTQPAEPAEGE--K-PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~--~-~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
...||++|+ +++ + .++|+........+ |+|||+.|+|.++.+..+.+||+++++++..+.+.++.....
T Consensus 293 ~~~l~~~d~---~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~---- 364 (741)
T 1yr2_A 293 VNTVHVARV---TNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKD---- 364 (741)
T ss_dssp CCEEEEEEE---ETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSS----
T ss_pred cceEEEEEC---CCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCC----
Confidence 458999998 666 6 77887655444444 569999999998765557899999998741134556543211
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCc
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 173 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~ 173 (494)
.+..++.++.++++.... ....+|++++++++..+.+..+... .+ ..
T Consensus 365 ----~l~~~~~~~~~lv~~~~~------------------dg~~~l~~~~~~g~~~~~l~~~~~~-----~v------~~ 411 (741)
T 1yr2_A 365 ----NLESVGIAGNRLFASYIH------------------DAKSQVLAFDLDGKPAGAVSLPGIG-----SA------SG 411 (741)
T ss_dssp ----EEEEEEEEBTEEEEEEEE------------------TTEEEEEEEETTSCEEEECBCSSSC-----EE------EE
T ss_pred ----eEEEEEEECCEEEEEEEE------------------CCEEEEEEEeCCCCceeeccCCCCe-----EE------EE
Confidence 111123346667776532 1233588888876655554432111 00 12
Q ss_pred ccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCCCCcccccccEEEEEEcCCCceEEEEEEeCCCCCCCCCC
Q 011049 174 EDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDG 253 (494)
Q Consensus 174 ~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~ 253 (494)
.++++|+..++++.++...|+++|.+++.+++.+.++... .......+..+.+.+++.||.+++++++.|++. .+
T Consensus 412 ~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~~~~-~~~~~~~~~~~~~~~~~~dg~~i~~~~~~p~~~----~~ 486 (741)
T 1yr2_A 412 LSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPWEPVH-LTFDPADFRVEQVFYPSKDGTKVPMFIVRRKDA----KG 486 (741)
T ss_dssp EECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEECSCCC-CSSCGGGEEEEEEEEECTTSCEEEEEEEEETTC----CS
T ss_pred eecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecCC-CCCChhHCEEEEEEEEcCCCCEEEEEEEecCCC----CC
Confidence 3677889899999999999999999999888766665422 112334567899999999999999999999875 23
Q ss_pred CCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCC---CchhHHHHHHHHHH
Q 011049 254 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP---NDRFVEQLVSSAEA 330 (494)
Q Consensus 254 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~---~~~~~~~~~~d~~~ 330 (494)
+.|+||++||++.....+ .| ....+.|+++||+|+.++.+|..++|..+. ...+....++|+.+
T Consensus 487 ~~p~vl~~hGg~~~~~~~---------~~----~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~ 553 (741)
T 1yr2_A 487 PLPTLLYGYGGFNVALTP---------WF----SAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRRDKKQNVFDDFIA 553 (741)
T ss_dssp CCCEEEECCCCTTCCCCC---------CC----CHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSGGGTHHHHHHHHH
T ss_pred CCcEEEEECCCCCccCCC---------Cc----CHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhhhcCCCcHHHHHH
Confidence 489999999986432110 12 234557889999999999988766654321 12223456899999
Q ss_pred HHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCC-----Cccccccccc--ccHHHHH
Q 011049 331 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF-----GFQTEFRTLW--EATNVYI 403 (494)
Q Consensus 331 ~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~ 403 (494)
++++|++++++|++||+|+|+|+||++++.++.++|++|+++|+.+|+.+...... .+..+.+.+. +..+.+.
T Consensus 554 ~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 633 (741)
T 1yr2_A 554 AGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQFTAGRYWVDDYGYPEKEADWRVLR 633 (741)
T ss_dssp HHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGGSTTGGGGHHHHCCTTSHHHHHHHH
T ss_pred HHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccCCCCCchhHHHcCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987532110 0111112221 1234557
Q ss_pred hcCccccccC-CC-CCEEEEecCCCCCCCCCHHHHHHHHHHHHh---CCCcEEEEEcCCCCCccCCc-ccHHHHHHHHHH
Q 011049 404 EMSPITHANK-IK-KPILIIHGEVDDKVGLFPMQAERFFDALKG---HGALSRLVLLPFEHHVYAAR-ENVMHVIWETDR 477 (494)
Q Consensus 404 ~~sp~~~~~~-~~-~P~li~~G~~D~~v~~~~~~~~~~~~~l~~---~g~~~~~~~~~~~~H~~~~~-~~~~~~~~~~~~ 477 (494)
..+|+.++.+ ++ +|+|++||++|.+|| +.++.+++++|++ .+++++++++++++|++... .........+.+
T Consensus 634 ~~sp~~~~~~~~~~~P~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~ 711 (741)
T 1yr2_A 634 RYSPYHNVRSGVDYPAILVTTADTDDRVV--PGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQIEETADVQA 711 (741)
T ss_dssp TTCGGGCCCTTSCCCEEEEEECSCCSSSC--THHHHHHHHHHHHSCCCSSCEEEEEC---------CHHHHHHHHHHHHH
T ss_pred HcCchhhhhccCCCCCEEEEeeCCCCCCC--hhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHH
Confidence 8899999997 88 499999999999998 9999999999999 88999999999999998653 334578889999
Q ss_pred HHHHhcCCCCC
Q 011049 478 WLQKYCLSNTS 488 (494)
Q Consensus 478 fl~~~l~~~~~ 488 (494)
||.++|+....
T Consensus 712 fl~~~l~~~~~ 722 (741)
T 1yr2_A 712 FLAHFTGLTPR 722 (741)
T ss_dssp HHHHHHTCCCC
T ss_pred HHHHHcCCCcc
Confidence 99999986544
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=344.22 Aligned_cols=412 Identities=15% Similarity=0.092 Sum_probs=294.5
Q ss_pred ceeeecc----CCCCCCCCCeeccc----c-ccccc-----cceecCCCceEEEEee-eeccceEEEEEcCCCCCCCceE
Q 011049 18 DIIYTQP----AEPAEGEKPEILHK----L-DLRFR-----SVSWCDDSLALVNETW-YKTSQTRTWLVCPGSKDVAPRV 82 (494)
Q Consensus 18 ~~i~~~~----~~~~~~~~~~~lt~----~-~~~~~-----~p~wspDg~~i~f~~~-~~~~~~~~~~~~~~~g~~~~~~ 82 (494)
.+||++| + ++++.++++. . ..... .|+|||||+.|+|.+. .++ ...||+++++++ +.++
T Consensus 278 ~~l~~~d~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g-~~~l~~~~~~~~--~~~~ 351 (719)
T 1z68_A 278 SVLSICDFREDW---QTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDG-YKHIHYIKDTVE--NAIQ 351 (719)
T ss_dssp EEEEEEEECSSS---SSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTS-CEEEEEESSCST--TCEE
T ss_pred EEEEEEcccCCC---CCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCC-ceEEEEEECCCC--ceEe
Confidence 3599999 7 7777777763 2 22222 7899999999998654 444 678999999987 6778
Q ss_pred eeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCc--eEEEEeeCc-ch
Q 011049 83 LFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS--KERIWESNR-EK 159 (494)
Q Consensus 83 lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~--~~~l~~~~~-~~ 159 (494)
|+...... ..+. ++ ||++|+|..... .......+||.++.+++. .+.+...-. .
T Consensus 352 lt~~~~~v-----~~~~--~~-d~~~i~~~~~~~--------------~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~- 408 (719)
T 1z68_A 352 ITSGKWEA-----INIF--RV-TQDSLFYSSNEF--------------EEYPGRRNIYRISIGSYPPSKKCVTCHLRKE- 408 (719)
T ss_dssp CSCSSSCE-----EEEE--EE-CSSEEEEEESCG--------------GGCTTCBEEEEEECSSSSCCEEESSTTTTTT-
T ss_pred cccCceEE-----EEEE--EE-eCCEEEEEEecC--------------CCCCceEEEEEEeCCCCCCCceeccCccCCC-
Confidence 87543321 1222 45 999999987310 001223468999887663 344432100 0
Q ss_pred hhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCC----CCcccccccEEEEEEcCCCc
Q 011049 160 YFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHP----YPTLASLQKEMIKYQRKDGV 235 (494)
Q Consensus 160 ~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~~~~----~~~~~~~~~~~~~~~~~dg~ 235 (494)
. .......||+|++.+++.++++..| .+++++.++++..+++..+.. .......+.+.+++++.| .
T Consensus 409 -----~---~~~~~~~~s~dg~~l~~~~s~~~~p-~~~l~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 478 (719)
T 1z68_A 409 -----R---CQYYTASFSDYAKYYALVCYGPGIP-ISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKKLEVDE-I 478 (719)
T ss_dssp -----T---BCBEEEEECGGGSSEEEEECCBSSC-EEEEECSSSCCEEEEEECCHHHHHHTTSBCCCEEEEEEEEETT-E
T ss_pred -----C---CceEEEEECCCCCEEEEEcCCCCCC-eEEEEECCCCCEEEEeecchhhhhhhccccCCceEEEEEecCC-e
Confidence 0 0001347899999999888877766 688888877776666655432 222233467889999888 8
Q ss_pred eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHH-HhCCeEEEeCCCCCCCCCCCC
Q 011049 236 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF-LARRFAVLAGPSIPIIGEGDK 314 (494)
Q Consensus 236 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~G~~v~~~~~~~~~g~g~~ 314 (494)
++++++++|+++++.+ ++|+||++||++.... ....| .......| +++||+|+++++++..+++..
T Consensus 479 ~l~~~~~~P~~~~~~~--~~p~vl~~hG~~~~~~--------~~~~~---~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~ 545 (719)
T 1z68_A 479 TLWYKMILPPQFDRSK--KYPLLIQVYGGPCSQS--------VRSVF---AVNWISYLASKEGMVIALVDGRGTAFQGDK 545 (719)
T ss_dssp EEEEEEEECTTCCSSS--CEEEEEEECCCTTBCC--------CCCCC---CCCHHHHHHHTTCCEEEEEECTTBSSSCHH
T ss_pred EEEEEEEeCCCCCCCC--CccEEEEECCCCCcCc--------ccccc---hhhHHHHHHhcCCeEEEEEcCCCCCCCchh
Confidence 9999999999875443 4899999999874321 00112 11233344 479999999888766544332
Q ss_pred CC---CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCccc-
Q 011049 315 LP---NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQT- 390 (494)
Q Consensus 315 ~~---~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~- 390 (494)
+. ...+....++|+.+++++|.+++.+|++||+|+|||+||++++.++.++|++|+++|+.+|+.++......+..
T Consensus 546 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~ 625 (719)
T 1z68_A 546 LLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYASVYTER 625 (719)
T ss_dssp HHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTSBHHHHHH
T ss_pred hHHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHhccccchh
Confidence 11 11223456889999999999988889999999999999999999999999999999999998875432111110
Q ss_pred ccccc--cccHHHHHhcCccccccCCCC-CEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCccc
Q 011049 391 EFRTL--WEATNVYIEMSPITHANKIKK-PILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAREN 467 (494)
Q Consensus 391 ~~~~~--~~~~~~~~~~sp~~~~~~~~~-P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 467 (494)
..+.+ ++..+.|...+|+..+.++++ |+|++||++|.+|| +.++.+++++|++.+++++++++|+++|.+ ..+.
T Consensus 626 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~-~~~~ 702 (719)
T 1z68_A 626 FMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTADDNVH--FQNSAQIAKALVNAQVDFQAMWYSDQNHGL-SGLS 702 (719)
T ss_dssp HHCCSSTTTTHHHHHHTCSGGGGGGGTTSEEEEEEETTCSSSC--THHHHHHHHHHHHTTCCCEEEEETTCCTTC-CTHH
T ss_pred hcCCcccccchhhhhhCCHhHHHhcCCCCcEEEEEeCCCCCcC--HHHHHHHHHHHHHCCCceEEEEECcCCCCC-Cccc
Confidence 01122 455667888899999999997 89999999999998 999999999999999999999999999998 4456
Q ss_pred HHHHHHHHHHHHHHhcC
Q 011049 468 VMHVIWETDRWLQKYCL 484 (494)
Q Consensus 468 ~~~~~~~~~~fl~~~l~ 484 (494)
...+++.+.+||+++|+
T Consensus 703 ~~~~~~~i~~fl~~~l~ 719 (719)
T 1z68_A 703 TNHLYTHMTHFLKQCFS 719 (719)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhhC
Confidence 77889999999999874
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=352.65 Aligned_cols=414 Identities=13% Similarity=0.066 Sum_probs=288.2
Q ss_pred cceeeeccCCCCCCCCCeeccccc--cc----cccceecCCCceEEEE-eeeec---cceEEEEEc-CCCCCCC---ceE
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLD--LR----FRSVSWCDDSLALVNE-TWYKT---SQTRTWLVC-PGSKDVA---PRV 82 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~--~~----~~~p~wspDg~~i~f~-~~~~~---~~~~~~~~~-~~~g~~~---~~~ 82 (494)
...||++|+ ++++.++++... .. ...|+|||||+.|+|. +..++ ...+||+++ .+++ + .++
T Consensus 279 ~~~i~~~d~---~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~--~~~~~~~ 353 (723)
T 1xfd_A 279 VSILTLCDA---TTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNS--SNDNIQS 353 (723)
T ss_dssp EEEEEEEET---TTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCS--SSCCCCB
T ss_pred eEEEEEEeC---CCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCC--CccceeE
Confidence 357899998 778777665332 11 1478999999999997 43332 145899999 5665 5 566
Q ss_pred eeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCC-ceEEEEee--Ccch
Q 011049 83 LFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTG-SKERIWES--NREK 159 (494)
Q Consensus 83 lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g-~~~~l~~~--~~~~ 159 (494)
|+...... ...+.|||||++|+|..... .....+||.++..++ +.+.+... ...
T Consensus 354 l~~~~~~~------~~~~~~spdg~~l~~~~~~~----------------~~~~~~l~~~~~~~~~~~~~l~~~~~~~~- 410 (723)
T 1xfd_A 354 ITSGDWDV------TKILAYDEKGNKIYFLSTED----------------LPRRRQLYSANTVGNFNRQCLSCDLVENC- 410 (723)
T ss_dssp SCCSSSCE------EEEEEEETTTTEEEEEESSS----------------CTTCCEEEEECSSTTCCCBCSSTTSSSSC-
T ss_pred eecCCeEE------EeeeEEcCCCCEEEEEEcCC----------------CCcceEEEEEeCCCCCCcceecccccCCC-
Confidence 76432211 11134999999999986320 012346888887664 33333321 000
Q ss_pred hhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCC----CCcccccccEEEEEEcCCCc
Q 011049 160 YFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHP----YPTLASLQKEMIKYQRKDGV 235 (494)
Q Consensus 160 ~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~~~~----~~~~~~~~~~~~~~~~~dg~ 235 (494)
......|||||+.+++.++++..|..++. +...++...+...+.. .......+.+.+++++.||
T Consensus 411 ----------~~~~~~~spdg~~l~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g- 478 (723)
T 1xfd_A 411 ----------TYFSASFSHSMDFFLLKCEGPGVPMVTVH-NTTDKKKMFDLETNEHVKKAINDRQMPKVEYRDIEIDDY- 478 (723)
T ss_dssp ----------CCCEEEECTTSSEEEEECCSSSSCCEEEE-ETTTCCEEEEEECCHHHHHHHHTSCCCBCCBCCEEETTE-
T ss_pred ----------CeEEEEECCCCCEEEEEccCCCCCeEEEE-ECCCCCEEEEeccChhhhhhhhhccCCCceEEEEEcCCc-
Confidence 01235899999999999999888876654 5544443322222211 1112223578888999999
Q ss_pred eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCC
Q 011049 236 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL 315 (494)
Q Consensus 236 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~ 315 (494)
++++++++|+++++.+ ++|+||++||+++... ....|. .......|+++||+|+++++++..++|..+
T Consensus 479 ~l~~~~~~P~~~~~~~--~~p~vv~~HG~~~~~~--------~~~~~~--~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~ 546 (723)
T 1xfd_A 479 NLPMQILKPATFTDTT--HYPLLLVVDGTPGSQS--------VAEKFE--VSWETVMVSSHGAVVVKCDGRGSGFQGTKL 546 (723)
T ss_dssp EECCBEEBCSSCCSSS--CEEEEEECCCCTTCCC--------CCCCCC--CSHHHHHHHTTCCEEECCCCTTCSSSHHHH
T ss_pred eEEEEEEeCCCCCCCC--ccCEEEEEcCCCCccc--------cCcccc--ccHHHHHhhcCCEEEEEECCCCCccccHHH
Confidence 9999999999875543 4899999999874311 011121 112344567799999998888765543221
Q ss_pred ---CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC----CCceeEEEeCCCCCCCCCCCCCc
Q 011049 316 ---PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA----PHLFCCGIARSGSYNKTLTPFGF 388 (494)
Q Consensus 316 ---~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~----p~~~~a~v~~~~~~~~~~~~~~~ 388 (494)
....+....++|+.++++++.+++.+|++||+|+|||+||++++.++.++ |++|+++|+.+|+.++......+
T Consensus 547 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~ 626 (723)
T 1xfd_A 547 LHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAF 626 (723)
T ss_dssp HHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBHHH
T ss_pred HHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHHhhhhc
Confidence 11122234678999999999988888999999999999999999999999 99999999999987754321111
Q ss_pred cc-ccccccccHHHHHhcCccccccCCC-CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcc
Q 011049 389 QT-EFRTLWEATNVYIEMSPITHANKIK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE 466 (494)
Q Consensus 389 ~~-~~~~~~~~~~~~~~~sp~~~~~~~~-~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~ 466 (494)
.. ..+.++...+.+...+|...+.+++ +|+|++||++|.+|| +.++.+++++|++.++++++++||+++|.+...+
T Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~ 704 (723)
T 1xfd_A 627 SERYLGLHGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIH--FQHTAELITQLIRGKANYSLQIYPDESHYFTSSS 704 (723)
T ss_dssp HHHHHCCCSSCCSSTTTTCTHHHHTSCCSCEEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHH
T ss_pred cHhhcCCccCChhHHHhcChhhHHhhcCCCCEEEEEeCCCCCcC--HhHHHHHHHHHHHCCCCeEEEEECCCCcccccCc
Confidence 10 1123333445566678888899999 799999999999998 9999999999999999999999999999986566
Q ss_pred cHHHHHHHHHHHHHHhcC
Q 011049 467 NVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 467 ~~~~~~~~~~~fl~~~l~ 484 (494)
....+++.+.+||+++|+
T Consensus 705 ~~~~~~~~i~~fl~~~l~ 722 (723)
T 1xfd_A 705 LKQHLYRSIINFFVECFR 722 (723)
T ss_dssp HHHHHHHHHHHHHTTTTC
T ss_pred chHHHHHHHHHHHHHHhc
Confidence 777889999999998875
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=328.52 Aligned_cols=414 Identities=12% Similarity=0.047 Sum_probs=287.1
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEee--e----eccceEEEEEcCCCCC------CCceEe
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETW--Y----KTSQTRTWLVCPGSKD------VAPRVL 83 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~--~----~~~~~~~~~~~~~~g~------~~~~~l 83 (494)
+...+|++++. ...++.++|.... ...+.++++|+.+++... . +..+..|.+++++++. .+.+.+
T Consensus 267 ~~~~~~~~~~~-~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 343 (711)
T 4hvt_A 267 YNYDNYILDTK-YKNLKLQKINMPS--DATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKIL 343 (711)
T ss_dssp SCEEEEEEECS-SSSCEEEECCSCT--TCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEE
T ss_pred CceeEEEEcCC-CCCCcceEeecCC--cceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEE
Confidence 34688888871 1124434553222 234567888866555432 1 1135679999987641 123332
Q ss_pred eecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCc--eEE-EEeeCcchh
Q 011049 84 FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS--KER-IWESNREKY 160 (494)
Q Consensus 84 t~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~--~~~-l~~~~~~~~ 160 (494)
........ ... +.|+.| ++++.... ....+|+++|+.+|+ .+. +..+...
T Consensus 344 ~~~~~~~~---l~~--~~~~~~--~l~~~~~~------------------~~~~~l~~~~~~~g~~~~~~~i~lp~~~-- 396 (711)
T 4hvt_A 344 FTPTANEV---FNF--ISTTKD--RVFLATYD------------------NVVAKVVTFTLENEQWTKPVVLKLPYQN-- 396 (711)
T ss_dssp ECCCTTEE---EEE--EEECSS--CEEEEEEE------------------TTEEEEEEECEETTEECCCEEECCCSTT--
T ss_pred ECCCCCCe---EEE--EEEECC--EEEEEEEE------------------CCEEEEEEEECCCCceEEEeccCCCCCe--
Confidence 22221110 011 125554 45554421 122358888887764 233 3222110
Q ss_pred hhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCCCCcccccccEEEEEEcCCCceEEEE
Q 011049 161 FETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTAT 240 (494)
Q Consensus 161 ~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~ 240 (494)
.+.. .+.++++..++++.++...|+++|.++.. ++.+.++..+... ....+.++.+++++.||.+|+++
T Consensus 397 ---~~~~------~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~l~~~~~~~-~~~~~~~e~v~~~s~DG~~i~~~ 465 (711)
T 4hvt_A 397 ---AIFG------MSSYEEEEEALITIENSIVPPTIYLWVKT-HELKIIRKALYSF-DSENYVLEQKEATSFDGVKIPYF 465 (711)
T ss_dssp ---CEEE------EECCTTCSCEEEEEECSSSCCEEEEECTT-SCEEEEECCSSCC-CGGGEEEEEEEEECTTSCEEEEE
T ss_pred ---EEEE------EeecCcCCEEEEEEecCCCCCEEEEEeCC-CcEEEEecCCccc-CcccCeeEEEEEECCCCeEEEEE
Confidence 0111 14457788899999999999999999987 7777777665433 23345789999999999999999
Q ss_pred EEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCC---CC
Q 011049 241 LYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL---PN 317 (494)
Q Consensus 241 l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~---~~ 317 (494)
+++|++.++. +++|+||++|||++....+ .|. ....+.|+++||+|+.+++||+.++|..+ ..
T Consensus 466 l~~P~~~~~~--~~~P~vl~~HGG~~~~~~~---------~~~---~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~ 531 (711)
T 4hvt_A 466 LVYKKGIKFD--GKNPTLLEAYGGFQVINAP---------YFS---RIKNEVWVKNAGVSVLANIRGGGEFGPEWHKSAQ 531 (711)
T ss_dssp EEEETTCCCS--SCCCEEEECCCCTTCCCCC---------CCC---HHHHHHTGGGTCEEEEECCTTSSTTCHHHHHTTS
T ss_pred EEecCCCCCC--CCccEEEEECCCCCCCCCC---------ccc---HHHHHHHHHCCCEEEEEeCCCCCCcchhHHHhhh
Confidence 9999986543 3499999999987433211 121 11224789999999999999888877643 22
Q ss_pred chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCC-----Cccccc
Q 011049 318 DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF-----GFQTEF 392 (494)
Q Consensus 318 ~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~-----~~~~~~ 392 (494)
..+....++|+.+++++|++++.+|++||+|+|+|+||++++++++++|++|+|+|+.+|++++..... .+..+.
T Consensus 532 ~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~~~~~~~~~~~~ 611 (711)
T 4hvt_A 532 GIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKEFGAGHSWVTEY 611 (711)
T ss_dssp GGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHHHH
T ss_pred hccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhccccchHHHHHh
Confidence 334556789999999999999999999999999999999999999999999999999999988543211 111112
Q ss_pred cccc--ccHHHHHhcCccccccCCCC--CEEEEecCCCCCCCCCHHHHHHHHHHH-HhCCCcEEEEEcCCCCCccCCcc-
Q 011049 393 RTLW--EATNVYIEMSPITHANKIKK--PILIIHGEVDDKVGLFPMQAERFFDAL-KGHGALSRLVLLPFEHHVYAARE- 466 (494)
Q Consensus 393 ~~~~--~~~~~~~~~sp~~~~~~~~~--P~li~~G~~D~~v~~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~H~~~~~~- 466 (494)
+.++ +..+.+...||+.++.++++ |+|++||++|.+|| +.++.+++++| ++.|++++++++++++|++....
T Consensus 612 G~p~~~~~~~~l~~~SP~~~v~~i~~~pPvLii~G~~D~~Vp--~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~ 689 (711)
T 4hvt_A 612 GDPEIPNDLLHIKKYAPLENLSLTQKYPTVLITDSVLDQRVH--PWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLK 689 (711)
T ss_dssp CCTTSHHHHHHHHHHCGGGSCCTTSCCCEEEEEEETTCCSSC--THHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHH
T ss_pred CCCcCHHHHHHHHHcCHHHHHhhcCCCCCEEEEecCCCCcCC--hHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcc
Confidence 2222 13355788899999999886 99999999999998 99999999999 99999999999999999986533
Q ss_pred cHHHHHHHHHHHHHHhcCCC
Q 011049 467 NVMHVIWETDRWLQKYCLSN 486 (494)
Q Consensus 467 ~~~~~~~~~~~fl~~~l~~~ 486 (494)
........+.+||.++|+..
T Consensus 690 ~~~~~~~~i~~FL~~~Lg~~ 709 (711)
T 4hvt_A 690 ESANYFINLYTFFANALKLK 709 (711)
T ss_dssp HHHHHHHHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHHHHHHHhCCc
Confidence 34567778999999999753
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-25 Score=203.76 Aligned_cols=222 Identities=18% Similarity=0.236 Sum_probs=167.0
Q ss_pred ccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEE
Q 011049 221 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 300 (494)
Q Consensus 221 ~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 300 (494)
.+..+.+++++ +|..+.++++.|++. .++.|+||++||.+. .... ....+..|+++||.|
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~~~p~~~----~~~~p~vv~~HG~~g-----------~~~~----~~~~~~~l~~~G~~v 62 (241)
T 3f67_A 3 AIIAGETSIPS-QGENMPAYHARPKNA----DGPLPIVIVVQEIFG-----------VHEH----IRDLCRRLAQEGYLA 62 (241)
T ss_dssp CEEEEEEEEEE-TTEEEEEEEEEETTC----CSCEEEEEEECCTTC-----------SCHH----HHHHHHHHHHTTCEE
T ss_pred cceeeeEEEec-CCcceEEEEecCCCC----CCCCCEEEEEcCcCc-----------cCHH----HHHHHHHHHHCCcEE
Confidence 34678889987 889999999999862 234899999998531 1111 123456788999999
Q ss_pred EeCCCCCCCCCCCCCCCc----------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCcee
Q 011049 301 LAGPSIPIIGEGDKLPND----------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFC 370 (494)
Q Consensus 301 ~~~~~~~~~g~g~~~~~~----------~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~ 370 (494)
++++.++..|........ .......+|+.++++++.+++ +|+++|+++|||+||.+++.++.++|+ ++
T Consensus 63 ~~~d~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~ 140 (241)
T 3f67_A 63 IAPELYFRQGDPNEYHDIPTLFKELVSKVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ-LK 140 (241)
T ss_dssp EEECTTTTTCCGGGCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT-CC
T ss_pred EEecccccCCCCCchhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC-cc
Confidence 998876543322211111 112456899999999999887 888999999999999999999999987 67
Q ss_pred EEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcE
Q 011049 371 CGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALS 450 (494)
Q Consensus 371 a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~ 450 (494)
+++++.+...... ..+...+|...+.++++|+|+++|++|..+| +.++..+++.|++.+.++
T Consensus 141 ~~v~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~P~l~~~g~~D~~~~--~~~~~~~~~~l~~~~~~~ 202 (241)
T 3f67_A 141 AAVAWYGKLVGEK----------------SLNSPKHPVDIAVDLNAPVLGLYGAKDASIP--QDTVETMRQALRAANATA 202 (241)
T ss_dssp EEEEESCCCSCCC----------------CSSSCCCHHHHGGGCCSCEEEEEETTCTTSC--HHHHHHHHHHHHHTTCSE
T ss_pred eEEEEeccccCCC----------------ccCCccCHHHhhhhcCCCEEEEEecCCCCCC--HHHHHHHHHHHHHcCCCc
Confidence 7777666432111 1112245666778889999999999999998 999999999999999999
Q ss_pred EEEEcCCCCCccCC-------cccHHHHHHHHHHHHHHh
Q 011049 451 RLVLLPFEHHVYAA-------RENVMHVIWETDRWLQKY 482 (494)
Q Consensus 451 ~~~~~~~~~H~~~~-------~~~~~~~~~~~~~fl~~~ 482 (494)
+++++++++|++.. .+.....++.+++||++|
T Consensus 203 ~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 241 (241)
T 3f67_A 203 EIVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQY 241 (241)
T ss_dssp EEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTTC
T ss_pred EEEEECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhhC
Confidence 99999999999853 223456788899999764
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-25 Score=204.94 Aligned_cols=211 Identities=11% Similarity=0.063 Sum_probs=143.9
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeC
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 303 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 303 (494)
.+.+++. .||.+|+++|++|++ ..+.|+||++||++... ........++.|+++||+|+.+
T Consensus 31 e~~~~~~-~dG~~i~g~l~~P~~-----~~~~p~Vl~~HG~g~~~-------------~~~~~~~~a~~la~~Gy~Vl~~ 91 (259)
T 4ao6_A 31 ERGFSLE-VDGRTVPGVYWSPAE-----GSSDRLVLLGHGGTTHK-------------KVEYIEQVAKLLVGRGISAMAI 91 (259)
T ss_dssp EEEEEEE-ETTEEEEEEEEEESS-----SCCSEEEEEEC---------------------CHHHHHHHHHHHTTEEEEEE
T ss_pred EEEEEEe-eCCeEEEEEEEeCCC-----CCCCCEEEEeCCCcccc-------------cchHHHHHHHHHHHCCCeEEee
Confidence 3344444 799999999999986 23479999999976321 1111224567899999999998
Q ss_pred CCCCCCCCCCCCC-----C-------------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC
Q 011049 304 PSIPIIGEGDKLP-----N-------------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 304 ~~~~~~g~g~~~~-----~-------------~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~ 365 (494)
|.++...++.... . .......+.|..++++++... +|++||+++|+|+||++++.+++..
T Consensus 92 D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~--~d~~rv~~~G~S~GG~~a~~~a~~~ 169 (259)
T 4ao6_A 92 DGPGHGERASVQAGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAE--EGPRPTGWWGLSMGTMMGLPVTASD 169 (259)
T ss_dssp CCCC-------------CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHH--HCCCCEEEEECTHHHHHHHHHHHHC
T ss_pred ccCCCCCCCCcccccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhc--cCCceEEEEeechhHHHHHHHHhcC
Confidence 8765422211100 0 011223466788888888665 6889999999999999999999999
Q ss_pred CCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 011049 366 PHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG 445 (494)
Q Consensus 366 p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~ 445 (494)
|. ++++|+..+..... ...++...+.++++|+|++||++|.+|| +.++.+++++|..
T Consensus 170 pr-i~Aav~~~~~~~~~--------------------~~~~~~~~a~~i~~P~Li~hG~~D~~vp--~~~~~~l~~al~~ 226 (259)
T 4ao6_A 170 KR-IKVALLGLMGVEGV--------------------NGEDLVRLAPQVTCPVRYLLQWDDELVS--LQSGLELFGKLGT 226 (259)
T ss_dssp TT-EEEEEEESCCTTST--------------------THHHHHHHGGGCCSCEEEEEETTCSSSC--HHHHHHHHHHCCC
T ss_pred Cc-eEEEEEeccccccc--------------------cccchhhhhccCCCCEEEEecCCCCCCC--HHHHHHHHHHhCC
Confidence 64 56666544322110 1123455678899999999999999998 9999999999854
Q ss_pred CCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 446 HGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 446 ~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
.+.+++++|+ +|... ...+..+.+++||++||+
T Consensus 227 --~~k~l~~~~G-~H~~~---p~~e~~~~~~~fl~~hLk 259 (259)
T 4ao6_A 227 --KQKTLHVNPG-KHSAV---PTWEMFAGTVDYLDQRLK 259 (259)
T ss_dssp --SSEEEEEESS-CTTCC---CHHHHTHHHHHHHHHHCC
T ss_pred --CCeEEEEeCC-CCCCc---CHHHHHHHHHHHHHHhcC
Confidence 4467889998 55422 233567889999999986
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-25 Score=207.76 Aligned_cols=238 Identities=14% Similarity=0.116 Sum_probs=171.6
Q ss_pred EEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCC
Q 011049 227 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI 306 (494)
Q Consensus 227 ~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~ 306 (494)
.++.+.+|.++.+++..|....+ .++.|+||++||++|..+. .. .....+..|+++||.|++++++
T Consensus 17 ~~~~~~~g~~l~~~~~~~~~~~~--~~~~p~vv~~HGgg~~~~~--------~~----~~~~~~~~l~~~G~~v~~~d~~ 82 (276)
T 3hxk_A 17 STFSLNDTAWVDFYQLQNPRQNE--NYTFPAIIICPGGGYQHIS--------QR----ESDPLALAFLAQGYQVLLLNYT 82 (276)
T ss_dssp EECCCBTTBEEEEECCCC--------CCBCEEEEECCSTTTSCC--------GG----GSHHHHHHHHHTTCEEEEEECC
T ss_pred ccccCCCCeEEEEEEeCCccccc--CCCCCEEEEEcCCccccCC--------ch----hhHHHHHHHHHCCCEEEEecCc
Confidence 45667788888877665543222 2448999999998754321 11 1123456788999999997776
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEecChHHHHHHHHHHh-CCCceeEEEeCCCCCCCC
Q 011049 307 PIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAH-APHLFCCGIARSGSYNKT 382 (494)
Q Consensus 307 ~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~~-~p~~~~a~v~~~~~~~~~ 382 (494)
+. |.+.....+ .....|+.++++++.++. .+|+++|+|+|||+||++++.++.+ .+.+++++|+.+|+.+..
T Consensus 83 g~---g~s~~~~~~-~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~ 158 (276)
T 3hxk_A 83 VM---NKGTNYNFL-SQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFT 158 (276)
T ss_dssp CT---TSCCCSCTH-HHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTT
T ss_pred cC---CCcCCCCcC-chHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHH
Confidence 43 332222222 456789999999998864 3788999999999999999999998 778999999999987632
Q ss_pred CCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCcc
Q 011049 383 LTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVY 462 (494)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 462 (494)
.. +.......... ..+. ...++...+.++++|+|++||++|..+| +.++..+++.|++.+.+++++++++++|++
T Consensus 159 ~~-~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 233 (276)
T 3hxk_A 159 FG-WPSDLSHFNFE-IENI-SEYNISEKVTSSTPPTFIWHTADDEGVP--IYNSLKYCDRLSKHQVPFEAHFFESGPHGV 233 (276)
T ss_dssp SS-CSSSSSSSCCC-CSCC-GGGBTTTTCCTTSCCEEEEEETTCSSSC--THHHHHHHHHHHTTTCCEEEEEESCCCTTC
T ss_pred hh-CCcchhhhhcC-chhh-hhCChhhccccCCCCEEEEecCCCceeC--hHHHHHHHHHHHHcCCCeEEEEECCCCCCc
Confidence 21 11000000000 1111 5567777888889999999999999998 899999999999999999999999999987
Q ss_pred CCcc------------cHHHHHHHHHHHHHHhcCCCC
Q 011049 463 AARE------------NVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 463 ~~~~------------~~~~~~~~~~~fl~~~l~~~~ 487 (494)
.... ....+++.+.+||+++.+..+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~ 270 (276)
T 3hxk_A 234 SLANRTTAPSDAYCLPSVHRWVSWASDWLERQIKNLE 270 (276)
T ss_dssp TTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHHHTTC
T ss_pred cccCccccccccccCchHHHHHHHHHHHHHhCccccc
Confidence 6422 335788899999999986554
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.1e-25 Score=211.41 Aligned_cols=245 Identities=14% Similarity=0.127 Sum_probs=166.2
Q ss_pred cccccEEEEEEcCCCceEEEEEEe-CCCCC------------------CCCCCCCcEEEEecCCCcCCcccCCcccCCCC
Q 011049 220 ASLQKEMIKYQRKDGVPLTATLYL-PPGYD------------------QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPN 280 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~~~~~~l~~-P~~~~------------------~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~ 280 (494)
..+..+.+++.+.+| +.+.+|+ |.+.. .....++|+||++|||+|..++..
T Consensus 60 ~~v~~~dv~~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~-------- 129 (365)
T 3ebl_A 60 EGVSSFDHIIDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSAS-------- 129 (365)
T ss_dssp TTEEEEEEEEETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTT--------
T ss_pred CCCceeeEEecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCc--------
Confidence 345688999998888 8888887 87531 112345899999999986432211
Q ss_pred ccCCCCchhHHHHHhC-CeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC----CCCCC-cEEEEecChH
Q 011049 281 EFSGMTPTSSLIFLAR-RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG----VADPS-RIAVGGHSYG 354 (494)
Q Consensus 281 ~~~~~~~~~~~~l~~~-G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~----~~d~~-ri~i~G~S~G 354 (494)
. .........|+++ ||+|+.+++|...+.. ....++|+.++++|+.++. .+|++ ||+|+|+|+|
T Consensus 130 ~--~~~~~~~~~la~~~g~~Vv~~dyR~~p~~~--------~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~G 199 (365)
T 3ebl_A 130 S--TIYDSLCRRFVKLSKGVVVSVNYRRAPEHR--------YPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSG 199 (365)
T ss_dssp B--HHHHHHHHHHHHHHTSEEEEECCCCTTTSC--------TTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHH
T ss_pred h--hhHHHHHHHHHHHCCCEEEEeeCCCCCCCC--------CcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCcc
Confidence 0 0011244567775 9999999987543321 1345789999999999765 58999 9999999999
Q ss_pred HHHHHHHHHhCCC---ceeEEEeCCCCCCCCCCCCCccccccccc---ccHHH-------------HHhcCccc-cccCC
Q 011049 355 AFMTAHLLAHAPH---LFCCGIARSGSYNKTLTPFGFQTEFRTLW---EATNV-------------YIEMSPIT-HANKI 414 (494)
Q Consensus 355 G~~a~~~~~~~p~---~~~a~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------~~~~sp~~-~~~~~ 414 (494)
|++++.++.+.++ +++++|+++|+++..............+. ..... ....+|+. ....+
T Consensus 200 G~la~~~a~~~~~~~~~~~g~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l 279 (365)
T 3ebl_A 200 GNIAHHVAVRAADEGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRL 279 (365)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTCCCC
T ss_pred HHHHHHHHHHHHhcCCceeeEEEEccccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhh
Confidence 9999999987665 79999999998774321110000000000 00000 01122332 22334
Q ss_pred C----CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccC---CcccHHHHHHHHHHHHHHhcCCCC
Q 011049 415 K----KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA---ARENVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 415 ~----~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~---~~~~~~~~~~~~~~fl~~~l~~~~ 487 (494)
+ +|+||+||++|.. ..++.+++++|++.|+++++++|++++|++. ..+....+++.+.+||++++++++
T Consensus 280 ~~~~~pP~Li~~G~~D~l----~~~~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~~~~ 355 (365)
T 3ebl_A 280 GGLPFAKSLIIVSGLDLT----CDRQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLYYGS 355 (365)
T ss_dssp TTSCCCCEEEEEETTSTT----HHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC---
T ss_pred ccCCCCCEEEEEcCcccc----hhHHHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhhccc
Confidence 4 6899999999975 5667899999999999999999999999976 234566889999999999998764
Q ss_pred C
Q 011049 488 S 488 (494)
Q Consensus 488 ~ 488 (494)
.
T Consensus 356 ~ 356 (365)
T 3ebl_A 356 H 356 (365)
T ss_dssp -
T ss_pred c
Confidence 4
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.5e-25 Score=214.78 Aligned_cols=231 Identities=19% Similarity=0.180 Sum_probs=172.6
Q ss_pred cccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 222 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 222 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
...+.+++++ ||.+|+++++.|++. ++.|+||++||.+.. ...+ ......|+++||.|+
T Consensus 125 ~~~~~v~~~~-dg~~i~~~l~~p~~~-----~~~P~vl~~hG~~~~-----------~~~~----~~~~~~l~~~G~~v~ 183 (386)
T 2jbw_A 125 PPAERHELVV-DGIPMPVYVRIPEGP-----GPHPAVIMLGGLEST-----------KEES----FQMENLVLDRGMATA 183 (386)
T ss_dssp SCEEEEEEEE-TTEEEEEEEECCSSS-----CCEEEEEEECCSSCC-----------TTTT----HHHHHHHHHTTCEEE
T ss_pred CCeEEEEEEe-CCEEEEEEEEcCCCC-----CCCCEEEEeCCCCcc-----------HHHH----HHHHHHHHhCCCEEE
Confidence 4688899987 899999999999873 348999999986411 1111 123567889999999
Q ss_pred eCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCC
Q 011049 302 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 381 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~ 381 (494)
.++.+| +|.+........+..+++.+++++|.+++.+|+++|+|+|+|+||++++.++.+ |++|+++|+. |+.+.
T Consensus 184 ~~d~rG---~G~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~ 258 (386)
T 2jbw_A 184 TFDGPG---QGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSD 258 (386)
T ss_dssp EECCTT---SGGGTTTCCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSC
T ss_pred EECCCC---CCCCCCCCCCCccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCCh
Confidence 977765 343311111112234567788999999888899999999999999999999999 8999999999 88764
Q ss_pred CCCCCCccc----------ccccccccH-HHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHH-HhCCCc
Q 011049 382 TLTPFGFQT----------EFRTLWEAT-NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDAL-KGHGAL 449 (494)
Q Consensus 382 ~~~~~~~~~----------~~~~~~~~~-~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l-~~~g~~ 449 (494)
......+.. ....++... +.+...++...+.++++|+|+++|++|. || +.++.+++++| +. +
T Consensus 259 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-v~--~~~~~~l~~~l~~~---~ 332 (386)
T 2jbw_A 259 LDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VP--LSFVDTVLELVPAE---H 332 (386)
T ss_dssp STTGGGSCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SC--THHHHHHHHHSCGG---G
T ss_pred HHHHHhccHHHHHHHHHHhCCCCHHHHHHHHHHhCChhhhhcccCCCEEEEECCCCC-CC--HHHHHHHHHHhcCC---C
Confidence 321110100 001122223 4556778888899999999999999999 88 89999999988 54 5
Q ss_pred EEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCCC
Q 011049 450 SRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSN 486 (494)
Q Consensus 450 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~ 486 (494)
++++++++++|.+ ......+.+.+.+||+++++..
T Consensus 333 ~~~~~~~~~gH~~--~~~~~~~~~~i~~fl~~~l~~~ 367 (386)
T 2jbw_A 333 LNLVVEKDGDHCC--HNLGIRPRLEMADWLYDVLVAG 367 (386)
T ss_dssp EEEEEETTCCGGG--GGGTTHHHHHHHHHHHHHHTSS
T ss_pred cEEEEeCCCCcCC--ccchHHHHHHHHHHHHHhcCCc
Confidence 8999999999976 3556688999999999999865
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-23 Score=191.71 Aligned_cols=214 Identities=18% Similarity=0.169 Sum_probs=163.6
Q ss_pred EEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCC
Q 011049 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 304 (494)
Q Consensus 225 ~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 304 (494)
+.+++++.+| ++.++++.|.+ .+.|+||++||.+...+ ..... ........|+++||.|+.++
T Consensus 24 ~~~~~~~~~g-~l~~~~~~p~~------~~~p~vv~~HG~~~~~~--------~~~~~--~~~~~~~~l~~~G~~v~~~d 86 (249)
T 2i3d_A 24 PEVIFNGPAG-RLEGRYQPSKE------KSAPIAIILHPHPQFGG--------TMNNQ--IVYQLFYLFQKRGFTTLRFN 86 (249)
T ss_dssp CEEEEEETTE-EEEEEEECCSS------TTCCEEEEECCCGGGTC--------CTTSH--HHHHHHHHHHHTTCEEEEEC
T ss_pred eEEEEECCCc-eEEEEEEcCCC------CCCCEEEEECCCcccCC--------Cccch--HHHHHHHHHHHCCCEEEEEC
Confidence 3899999998 99999998864 12799999999642111 10000 01234567889999999977
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC
Q 011049 305 SIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT 384 (494)
Q Consensus 305 ~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~ 384 (494)
.++ +|.+...........+|+.++++++.++. .++++++++|||+||.+++.++.++|+ ++++|+.+|..+...
T Consensus 87 ~~g---~G~s~~~~~~~~~~~~d~~~~i~~l~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~- 160 (249)
T 2i3d_A 87 FRS---IGRSQGEFDHGAGELSDAASALDWVQSLH-PDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD- 160 (249)
T ss_dssp CTT---STTCCSCCCSSHHHHHHHHHHHHHHHHHC-TTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC-
T ss_pred CCC---CCCCCCCCCCccchHHHHHHHHHHHHHhC-CCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh-
Confidence 654 44443222221233489999999999886 477899999999999999999999988 999999998754210
Q ss_pred CCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHh-CCCcEEEEEcCCCCCccC
Q 011049 385 PFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG-HGALSRLVLLPFEHHVYA 463 (494)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~H~~~ 463 (494)
...+.++++|+|+++|++|..+| ..+++++++.+.+ .+.+++++++++++|.+.
T Consensus 161 -----------------------~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~ 215 (249)
T 2i3d_A 161 -----------------------FSFLAPCPSSGLIINGDADKVAP--EKDVNGLVEKLKTQKGILITHRTLPGANHFFN 215 (249)
T ss_dssp -----------------------CTTCTTCCSCEEEEEETTCSSSC--HHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT
T ss_pred -----------------------hhhhcccCCCEEEEEcCCCCCCC--HHHHHHHHHHHhhccCCceeEEEECCCCcccc
Confidence 12345678999999999999998 9999999999986 456899999999999876
Q ss_pred CcccHHHHHHHHHHHHHHhcCCCCC
Q 011049 464 ARENVMHVIWETDRWLQKYCLSNTS 488 (494)
Q Consensus 464 ~~~~~~~~~~~~~~fl~~~l~~~~~ 488 (494)
+....+.+.+.+||++++.....
T Consensus 216 --~~~~~~~~~i~~fl~~~l~~~~~ 238 (249)
T 2i3d_A 216 --GKVDELMGECEDYLDRRLNGELV 238 (249)
T ss_dssp --TCHHHHHHHHHHHHHHHHTTCSS
T ss_pred --cCHHHHHHHHHHHHHHhcCCCCC
Confidence 46778899999999999976544
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-24 Score=210.63 Aligned_cols=227 Identities=18% Similarity=0.206 Sum_probs=167.8
Q ss_pred ccEEEEEEcC-CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 223 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 223 ~~~~~~~~~~-dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
..+.++|.+. ||..+.+++|+|+++.+.+ ++|+||++||+++.......+..... .+.. ..........|+.|+
T Consensus 143 ~~~~~~~~~~~dg~~l~~~v~~P~~~~~~~--~~Pvvv~lHG~g~~~~~~~~~~~~~~-g~~~--~~~~~~~~~~~~~vv 217 (380)
T 3doh_A 143 DFLAFTFKDPETGVEIPYRLFVPKDVNPDR--KYPLVVFLHGAGERGTDNYLQVAGNR-GAVV--WAQPRYQVVHPCFVL 217 (380)
T ss_dssp GEEEEEEECTTTCCEEEEEEECCSSCCTTS--CEEEEEEECCGGGCSSSSSHHHHSST-TTTG--GGSHHHHTTSCCEEE
T ss_pred cccceeeccCCCCcEEEEEEEcCCCCCCCC--CccEEEEECCCCCCCCchhhhhhccc-ccee--ecCccccccCCEEEE
Confidence 4677889988 9999999999999876544 48999999998754322111111100 0100 011223456889999
Q ss_pred eCCCCCCCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC
Q 011049 302 AGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 378 (494)
+++.++..+++..+.. .........|+.++++++.++..+|++||+|+|||+||++++.++.++|++|+++++++|.
T Consensus 218 ~pd~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~ 297 (380)
T 3doh_A 218 APQCPPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGG 297 (380)
T ss_dssp EECCCTTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCC
T ss_pred EecCCCCCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCC
Confidence 9888766555543321 1111345778889999999887799999999999999999999999999999999999996
Q ss_pred CCCCCCCCCcccccccccccHHHHHhcCccccccCCC-CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 011049 379 YNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPF 457 (494)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~-~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 457 (494)
.+ + ..+.+++ +|+|++||++|..+| +.++.+++++|++.+.++++++||+
T Consensus 298 ~~--------------------------~-~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~l~~~g~~~~~~~~~~ 348 (380)
T 3doh_A 298 GD--------------------------V-SKVERIKDIPIWVFHAEDDPVVP--VENSRVLVKKLAEIGGKVRYTEYEK 348 (380)
T ss_dssp CC--------------------------G-GGGGGGTTSCEEEEEETTCSSSC--THHHHHHHHHHHHTTCCEEEEEECT
T ss_pred CC--------------------------h-hhhhhccCCCEEEEecCCCCccC--HHHHHHHHHHHHHCCCceEEEEecC
Confidence 41 1 1223334 899999999999998 9999999999999999999999999
Q ss_pred C---CCccCCcccHHHHHH--HHHHHHHHhc
Q 011049 458 E---HHVYAARENVMHVIW--ETDRWLQKYC 483 (494)
Q Consensus 458 ~---~H~~~~~~~~~~~~~--~~~~fl~~~l 483 (494)
+ +|++.........+. .+++||.++.
T Consensus 349 ~~h~~h~~~~H~~~~~~~~~~~i~~wL~~~~ 379 (380)
T 3doh_A 349 GFMEKHGWDPHGSWIPTYENQEAIEWLFEQS 379 (380)
T ss_dssp THHHHTTCCTTCTHHHHHTCHHHHHHHHTCC
T ss_pred CcccCCCCCCchhHHHhcCCHHHHHHHHhhc
Confidence 9 555544445556666 8899998763
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-24 Score=210.31 Aligned_cols=222 Identities=18% Similarity=0.192 Sum_probs=158.8
Q ss_pred eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCC
Q 011049 236 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL 315 (494)
Q Consensus 236 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~ 315 (494)
.+.++++.|++ .++.|+||++||++.. .....+..|+++||.|+++++++..+.....
T Consensus 144 ~l~~~l~~P~~-----~~~~P~Vv~~hG~~~~-----------------~~~~~a~~La~~Gy~V~a~D~rG~g~~~~~~ 201 (422)
T 3k2i_A 144 RVRATLFLPPG-----PGPFPGIIDIFGIGGG-----------------LLEYRASLLAGHGFATLALAYYNFEDLPNNM 201 (422)
T ss_dssp TEEEEEEECSS-----SCCBCEEEEECCTTCS-----------------CCCHHHHHHHTTTCEEEEEECSSSTTSCSSC
T ss_pred cEEEEEEcCCC-----CCCcCEEEEEcCCCcc-----------------hhHHHHHHHHhCCCEEEEEccCCCCCCCCCc
Confidence 79999999986 3458999999997421 1123466889999999998877643322221
Q ss_pred CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccc----
Q 011049 316 PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTE---- 391 (494)
Q Consensus 316 ~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~---- 391 (494)
.. ...+|+.+++++|.++..+|+++|+|+|||+||++++.++.++|+ ++++|+++|........+.+...
T Consensus 202 ~~-----~~~~d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~ 275 (422)
T 3k2i_A 202 DN-----ISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKHSSIPP 275 (422)
T ss_dssp SC-----EETHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTEEECC
T ss_pred cc-----CCHHHHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCCcCCC
Confidence 11 126778899999999888899999999999999999999999988 89999988876422211111000
Q ss_pred -----------------cccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHH-HHHHHHHHhCCCc-EEE
Q 011049 392 -----------------FRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQA-ERFFDALKGHGAL-SRL 452 (494)
Q Consensus 392 -----------------~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~-~~~~~~l~~~g~~-~~~ 452 (494)
....+..+......+....+.++++|+|++||++|..+| ..+. +.+.+.|++.+++ +++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp--~~~~~~~~~~~l~~~g~~~~~l 353 (422)
T 3k2i_A 276 LGYDLRRIKVAFSGLVDIVDIRNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWR--SELYAQTVSERLQAHGKEKPQI 353 (422)
T ss_dssp CCBCGGGCEECTTSCEECTTCBCCCTTGGGSTTBCCGGGCCSCEEEEEETTCSSSC--HHHHHHHHHHHHHHTTCCCCEE
T ss_pred cccchhhcccCcchhHHHHHHHhhhhhcccccccccHHHCCCCEEEEEeCCCCCCC--HHHHHHHHHHHHHhcCCCCCEE
Confidence 000111111112233344567889999999999999998 7755 6899999999988 999
Q ss_pred EEcCCCCCccCCc---------------------------ccHHHHHHHHHHHHHHhcCCCC
Q 011049 453 VLLPFEHHVYAAR---------------------------ENVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 453 ~~~~~~~H~~~~~---------------------------~~~~~~~~~~~~fl~~~l~~~~ 487 (494)
++||+++|.+..+ +...+.++++.+||++||++..
T Consensus 354 ~~~~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~~~~ 415 (422)
T 3k2i_A 354 ICYPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGTQ 415 (422)
T ss_dssp EEETTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred EEECCCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 9999999997321 3456788999999999998654
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.2e-24 Score=203.01 Aligned_cols=233 Identities=13% Similarity=0.111 Sum_probs=165.7
Q ss_pred cccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEE
Q 011049 222 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAV 300 (494)
Q Consensus 222 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v 300 (494)
+..+.+++++.|| .+.+++|.|++. . .|+||++|||+|..+ +...+ ......|++ .||.|
T Consensus 61 ~~~~~~~~~~~~g-~i~~~~~~p~~~----~--~p~vv~~HGgg~~~g--------~~~~~----~~~~~~la~~~g~~V 121 (326)
T 3ga7_A 61 MTTRTCAVPTPYG-DVTTRLYSPQPT----S--QATLYYLHGGGFILG--------NLDTH----DRIMRLLARYTGCTV 121 (326)
T ss_dssp CEEEEEEECCTTS-CEEEEEEESSSS----C--SCEEEEECCSTTTSC--------CTTTT----HHHHHHHHHHHCSEE
T ss_pred cceEEEEeecCCC-CeEEEEEeCCCC----C--CcEEEEECCCCcccC--------Chhhh----HHHHHHHHHHcCCEE
Confidence 4458999999999 899999999752 1 499999999986432 22222 234556677 79999
Q ss_pred EeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEecChHHHHHHHHHHhCCCc------eeE
Q 011049 301 LAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPHL------FCC 371 (494)
Q Consensus 301 ~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~~~p~~------~~a 371 (494)
+.++++...++. ....++|+.++++|+.++. .+|++||+|+|+|+||++++.++.+.++. +++
T Consensus 122 ~~~dyr~~p~~~--------~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~ 193 (326)
T 3ga7_A 122 IGIDYSLSPQAR--------YPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIA 193 (326)
T ss_dssp EEECCCCTTTSC--------TTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEE
T ss_pred EEeeCCCCCCCC--------CCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceE
Confidence 998887543321 1234688999999999864 47999999999999999999999987764 899
Q ss_pred EEeCCCCCCCCCCCCC--ccccc-ccccccHHH----H-----HhcCccc-----cccCCCCCEEEEecCCCCCCCCCHH
Q 011049 372 GIARSGSYNKTLTPFG--FQTEF-RTLWEATNV----Y-----IEMSPIT-----HANKIKKPILIIHGEVDDKVGLFPM 434 (494)
Q Consensus 372 ~v~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~----~-----~~~sp~~-----~~~~~~~P~li~~G~~D~~v~~~~~ 434 (494)
+++.+|+.+....... +.... ......... | ...+|.. .+.+..+|+||+||+.|.+ ..
T Consensus 194 ~vl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~----~~ 269 (326)
T 3ga7_A 194 ILLWYGLYGLQDSVSRRLFGGAWDGLTREDLDMYEKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAEFDPL----ID 269 (326)
T ss_dssp EEEESCCCSCSCCHHHHHCCCTTTTCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCSSCCCCEEEEEETTCTT----HH
T ss_pred EEEeccccccCCChhHhhhcCCCCCCCHHHHHHHHHHhCCCCCccCCcccCCCcchhhcCCCCEEEEecCcCcC----HH
Confidence 9999998664321100 00000 000000001 1 1112322 2334557999999999998 46
Q ss_pred HHHHHHHHHHhCCCcEEEEEcCCCCCccCCc----ccHHHHHHHHHHHHHHhcCC
Q 011049 435 QAERFFDALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 435 ~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~fl~~~l~~ 485 (494)
++.+++++|++.|+++++++|++++|++... +....+++.+.+||.++++.
T Consensus 270 ~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l~~ 324 (326)
T 3ga7_A 270 DSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARMKT 324 (326)
T ss_dssp HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHhcc
Confidence 8899999999999999999999999998532 23468889999999999864
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2e-24 Score=200.22 Aligned_cols=236 Identities=16% Similarity=0.131 Sum_probs=163.7
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCC-CCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQ-SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~-~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
+.+.+++. .+|..+.+.+|.|++... ...++.|+||++|||+|..++ ...+ ...+..|+++||.|+
T Consensus 3 ~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~--------~~~~----~~~~~~l~~~G~~v~ 69 (277)
T 3bxp_A 3 QVEQRTLN-TAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHS--------GREE----APIATRMMAAGMHTV 69 (277)
T ss_dssp EEEEEEEC-STTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCC--------CTTH----HHHHHHHHHTTCEEE
T ss_pred ceEEEEec-cCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCC--------Cccc----hHHHHHHHHCCCEEE
Confidence 45667774 678899999999983210 112348999999998754321 1111 234557888999999
Q ss_pred eCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEecChHHHHHHHHHHhC-------------
Q 011049 302 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA------------- 365 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~~~------------- 365 (494)
.+++++....+. . ......|+.++++++.+.. .+|+++|+++|||+||++++.++.++
T Consensus 70 ~~d~~g~g~~~~-----~-~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~ 143 (277)
T 3bxp_A 70 VLNYQLIVGDQS-----V-YPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDH 143 (277)
T ss_dssp EEECCCSTTTCC-----C-TTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTT
T ss_pred EEecccCCCCCc-----c-CchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCccc
Confidence 977765311111 1 1345678888888887752 26788999999999999999999985
Q ss_pred -CCceeEEEeCCCCCCCCCCCCCccccccccc-ccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHH
Q 011049 366 -PHLFCCGIARSGSYNKTLTPFGFQTEFRTLW-EATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDAL 443 (494)
Q Consensus 366 -p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l 443 (494)
+.+++++|+.+|+.+.... +.... ... .....+...+|...+.++.+|+|++||++|..+| +.++.++++.|
T Consensus 144 ~~~~~~~~v~~~p~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~l 217 (277)
T 3bxp_A 144 YQGQHAAIILGYPVIDLTAG---FPTTS-AARNQITTDARLWAAQRLVTPASKPAFVWQTATDESVP--PINSLKYVQAM 217 (277)
T ss_dssp CCCCCSEEEEESCCCBTTSS---SSSSH-HHHHHHCSCGGGSBGGGGCCTTSCCEEEEECTTCCCSC--THHHHHHHHHH
T ss_pred ccCCcCEEEEeCCcccCCCC---CCCcc-ccchhccchhhhcCHhhccccCCCCEEEEeeCCCCccC--hHHHHHHHHHH
Confidence 6789999999998763221 10000 000 0000223467777788888999999999999998 99999999999
Q ss_pred HhCCCcEEEEEcCCCCCccCCcc--------------cHHHHHHHHHHHHHHhc
Q 011049 444 KGHGALSRLVLLPFEHHVYAARE--------------NVMHVIWETDRWLQKYC 483 (494)
Q Consensus 444 ~~~g~~~~~~~~~~~~H~~~~~~--------------~~~~~~~~~~~fl~~~l 483 (494)
++.+.+++++++++++|.+.... ....+++.+.+||+++.
T Consensus 218 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 218 LQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQG 271 (277)
T ss_dssp HHTTCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhcc
Confidence 99999999999999999765432 24578889999999875
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-24 Score=207.21 Aligned_cols=236 Identities=15% Similarity=0.141 Sum_probs=170.4
Q ss_pred cccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeE
Q 011049 220 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 299 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~ 299 (494)
.....+.+++++.||.++.++++.|++. .++.|+||++||+++.. . + ......|+++||+
T Consensus 64 ~~~~~~~~~~~~~dg~~i~~~~~~P~~~----~~~~p~vv~~HG~g~~~-----------~-~----~~~~~~l~~~G~~ 123 (337)
T 1vlq_A 64 KTVEAYDVTFSGYRGQRIKGWLLVPKLE----EEKLPCVVQYIGYNGGR-----------G-F----PHDWLFWPSMGYI 123 (337)
T ss_dssp SSEEEEEEEEECGGGCEEEEEEEEECCS----CSSEEEEEECCCTTCCC-----------C-C----GGGGCHHHHTTCE
T ss_pred CCeEEEEEEEEcCCCCEEEEEEEecCCC----CCCccEEEEEcCCCCCC-----------C-C----chhhcchhhCCCE
Confidence 3456889999999999999999999863 23489999999976321 0 1 1223367889999
Q ss_pred EEeCCCCCCCCCCCC--CCC----------------------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHH
Q 011049 300 VLAGPSIPIIGEGDK--LPN----------------------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGA 355 (494)
Q Consensus 300 v~~~~~~~~~g~g~~--~~~----------------------~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG 355 (494)
|++++.++..+++.. ... .......+.|+.++++++.+++.+|++||+|+|+|+||
T Consensus 124 v~~~d~rG~g~s~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG 203 (337)
T 1vlq_A 124 CFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGG 203 (337)
T ss_dssp EEEECCTTCCCSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHH
T ss_pred EEEecCCCCCCcccCCCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHH
Confidence 999888765432211 000 11234678999999999999988899999999999999
Q ss_pred HHHHHHHHhCCCceeEEEeCCCCCCCCC------CCCCcccc----ccccccc---HHHHHhcCccccccCCCCCEEEEe
Q 011049 356 FMTAHLLAHAPHLFCCGIARSGSYNKTL------TPFGFQTE----FRTLWEA---TNVYIEMSPITHANKIKKPILIIH 422 (494)
Q Consensus 356 ~~a~~~~~~~p~~~~a~v~~~~~~~~~~------~~~~~~~~----~~~~~~~---~~~~~~~sp~~~~~~~~~P~li~~ 422 (494)
++++.++..+| +++++|+.+|...... ....+... ...+... ...+...+|...+.++++|+|+++
T Consensus 204 ~la~~~a~~~p-~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~ 282 (337)
T 1vlq_A 204 GIALAVSALSK-KAKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSV 282 (337)
T ss_dssp HHHHHHHHHCS-SCCEEEEESCCSCCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTTCCSCEEEEE
T ss_pred HHHHHHHhcCC-CccEEEECCCcccCHHHHHhcCCCcchHHHHHHHHhCchhHHHHHHhhhhccHHHHHHHcCCCEEEEe
Confidence 99999999998 5899998888544210 00000000 0000001 112344577778889999999999
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 423 GEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 423 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
|++|.++| +.++.+++++|+. ++++.++++++|.+. .....+.+.+||.++|+.
T Consensus 283 G~~D~~~p--~~~~~~~~~~l~~---~~~~~~~~~~gH~~~----~~~~~~~~~~fl~~~l~~ 336 (337)
T 1vlq_A 283 GLMDNICP--PSTVFAAYNYYAG---PKEIRIYPYNNHEGG----GSFQAVEQVKFLKKLFEK 336 (337)
T ss_dssp ETTCSSSC--HHHHHHHHHHCCS---SEEEEEETTCCTTTT----HHHHHHHHHHHHHHHHC-
T ss_pred eCCCCCCC--chhHHHHHHhcCC---CcEEEEcCCCCCCCc----chhhHHHHHHHHHHHHhc
Confidence 99999998 9999888888764 589999999999864 235678899999999864
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.5e-24 Score=211.86 Aligned_cols=222 Identities=13% Similarity=0.165 Sum_probs=156.6
Q ss_pred eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCC
Q 011049 236 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL 315 (494)
Q Consensus 236 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~ 315 (494)
.+.+++|.|++ .++.|+||++||++.. .....+..|+++||.|+++++++..+.....
T Consensus 160 ~l~~~l~~P~~-----~~~~P~Vv~lhG~~~~-----------------~~~~~a~~La~~Gy~Vla~D~rG~~~~~~~~ 217 (446)
T 3hlk_A 160 RVRGTLFLPPE-----PGPFPGIVDMFGTGGG-----------------LLEYRASLLAGKGFAVMALAYYNYEDLPKTM 217 (446)
T ss_dssp TEEEEEEECSS-----SCCBCEEEEECCSSCS-----------------CCCHHHHHHHTTTCEEEEECCSSSTTSCSCC
T ss_pred eEEEEEEeCCC-----CCCCCEEEEECCCCcc-----------------hhhHHHHHHHhCCCEEEEeccCCCCCCCcch
Confidence 79999999975 3458999999997521 1123466889999999998887643332221
Q ss_pred CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccc----
Q 011049 316 PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTE---- 391 (494)
Q Consensus 316 ~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~---- 391 (494)
.. ...+|+.+++++|.++..+|+++|+|+|||+||.+++.++.++|+ ++++|+++|........+.+...
T Consensus 218 ~~-----~~~~d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~ 291 (446)
T 3hlk_A 218 ET-----LHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPP 291 (446)
T ss_dssp SE-----EEHHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECC
T ss_pred hh-----CCHHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCc
Confidence 11 126778899999999988899999999999999999999999988 89999988865322111110000
Q ss_pred -----------------cccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHH-HHHHHHHHhCCCc-EEE
Q 011049 392 -----------------FRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQA-ERFFDALKGHGAL-SRL 452 (494)
Q Consensus 392 -----------------~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~-~~~~~~l~~~g~~-~~~ 452 (494)
....+.........+....+.++++|+|+++|++|..+| ..+. ..+.+.|++.+++ +++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp--~~~~~~~~~~~l~~~g~~~~~l 369 (446)
T 3hlk_A 292 VGVNRNRIKVTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWK--SEFYANEACKRLQAHGRRKPQI 369 (446)
T ss_dssp CCBCGGGCEECSSSCEECTTCBCCTTSGGGGGGBCCGGGCCSEEEEEEETTCCSSC--HHHHHHHHHHHHHHTTCCCCEE
T ss_pred cccchhccccccchHHHHHHHHhchhhccccccccCHHHCCCCEEEEEeCCCCCcC--hHHHHHHHHHHHHHcCCCCcEE
Confidence 000111111111112233467788999999999999998 7454 7899999999988 899
Q ss_pred EEcCCCCCccC---------------------------CcccHHHHHHHHHHHHHHhcCCCC
Q 011049 453 VLLPFEHHVYA---------------------------ARENVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 453 ~~~~~~~H~~~---------------------------~~~~~~~~~~~~~~fl~~~l~~~~ 487 (494)
++||+++|.+. ..+...+.++++.+||+++|++..
T Consensus 370 ~~~pgagH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~~~~ 431 (446)
T 3hlk_A 370 ICYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGHE 431 (446)
T ss_dssp EEETTBCSCCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred EEECCCCCeECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 99999999983 112256788999999999998653
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-24 Score=203.93 Aligned_cols=222 Identities=18% Similarity=0.070 Sum_probs=156.6
Q ss_pred eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEEeCCCCCCCCCCCC
Q 011049 236 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDK 314 (494)
Q Consensus 236 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g~~ 314 (494)
.+++++|.|++ .++.|+||++|||+|..+ +...+. .....|+. .||.|+.++++...+..
T Consensus 66 ~i~~~~~~p~~-----~~~~p~vv~~HGGg~~~g--------~~~~~~----~~~~~la~~~g~~vv~~dyr~~p~~~-- 126 (322)
T 3fak_A 66 GCAAEWVRAPG-----CQAGKAILYLHGGGYVMG--------SINTHR----SMVGEISRASQAAALLLDYRLAPEHP-- 126 (322)
T ss_dssp TEEEEEEECTT-----CCTTCEEEEECCSTTTSC--------CHHHHH----HHHHHHHHHHTSEEEEECCCCTTTSC--
T ss_pred CeEEEEEeCCC-----CCCccEEEEEcCCccccC--------ChHHHH----HHHHHHHHhcCCEEEEEeCCCCCCCC--
Confidence 59999999975 234899999999875432 211121 23345555 69999998887543221
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCc----eeEEEeCCCCCCCCCCCCCccc
Q 011049 315 LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL----FCCGIARSGSYNKTLTPFGFQT 390 (494)
Q Consensus 315 ~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~----~~a~v~~~~~~~~~~~~~~~~~ 390 (494)
....++|+.++++|+.++ .+|++||+|+|+|+||++++.++.+.++. ++++|+++|+.+.......+..
T Consensus 127 ------~~~~~~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~ 199 (322)
T 3fak_A 127 ------FPAAVEDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFKT 199 (322)
T ss_dssp ------TTHHHHHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHHH
T ss_pred ------CCcHHHHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHHH
Confidence 134578999999999998 57999999999999999999999887654 8999999999875432211111
Q ss_pred ccc-cccc-------cHHHH--------HhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEE
Q 011049 391 EFR-TLWE-------ATNVY--------IEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVL 454 (494)
Q Consensus 391 ~~~-~~~~-------~~~~~--------~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~ 454 (494)
... .++. ....| ...+|+...-+..+|+||+||+.|.+ ..++..++++|++.|+++++++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~~----~~~~~~~~~~l~~~g~~~~~~~ 275 (322)
T 3fak_A 200 RAEADPMVAPGGINKMAARYLNGADAKHPYASPNFANLKGLPPLLIHVGRDEVL----LDDSIKLDAKAKADGVKSTLEI 275 (322)
T ss_dssp TTTTCCSCCSSHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEETTSTT----HHHHHHHHHHHHHTTCCEEEEE
T ss_pred hCccCcccCHHHHHHHHHHhcCCCCCCCcccCCCcccccCCChHhEEEcCcCcc----HHHHHHHHHHHHHcCCCEEEEE
Confidence 000 0000 00111 12345533222336999999999986 5788999999999999999999
Q ss_pred cCCCCCccCC----cccHHHHHHHHHHHHHHhcCCCC
Q 011049 455 LPFEHHVYAA----RENVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 455 ~~~~~H~~~~----~~~~~~~~~~~~~fl~~~l~~~~ 487 (494)
|++++|++.. .+.....++.+.+||.+++....
T Consensus 276 ~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~~ 312 (322)
T 3fak_A 276 WDDMIHVWHAFHPMLPEGKQAIVRVGEFMREQWAALA 312 (322)
T ss_dssp ETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC--
T ss_pred eCCceeehhhccCCCHHHHHHHHHHHHHHHHHHhcch
Confidence 9999998753 23356888999999999997653
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-24 Score=206.11 Aligned_cols=231 Identities=14% Similarity=0.120 Sum_probs=167.5
Q ss_pred cccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeE
Q 011049 220 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 299 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~ 299 (494)
.....+.+++++.+|.++.++++.|++ .++.|+||++||++... ..|. ....++++||.
T Consensus 78 ~~~~~~~~~~~~~~g~~l~~~~~~P~~-----~~~~p~vv~~HG~g~~~-----------~~~~-----~~~~~~~~G~~ 136 (346)
T 3fcy_A 78 SFAECYDLYFTGVRGARIHAKYIKPKT-----EGKHPALIRFHGYSSNS-----------GDWN-----DKLNYVAAGFT 136 (346)
T ss_dssp TTEEEEEEEEECGGGCEEEEEEEEESC-----SSCEEEEEEECCTTCCS-----------CCSG-----GGHHHHTTTCE
T ss_pred CceEEEEEEEEcCCCCEEEEEEEecCC-----CCCcCEEEEECCCCCCC-----------CChh-----hhhHHHhCCcE
Confidence 345678899999999999999999986 23489999999986321 1122 22367899999
Q ss_pred EEeCCCCCCCCCCCC-------------------CCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHH
Q 011049 300 VLAGPSIPIIGEGDK-------------------LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAH 360 (494)
Q Consensus 300 v~~~~~~~~~g~g~~-------------------~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~ 360 (494)
|++++.++..+.... .....+....+.|+.++++++.....+|++||+|+|+|+||.+++.
T Consensus 137 v~~~D~rG~g~s~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~ 216 (346)
T 3fcy_A 137 VVAMDVRGQGGQSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLA 216 (346)
T ss_dssp EEEECCTTSSSSCCCCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHH
T ss_pred EEEEcCCCCCCCCCCCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHH
Confidence 999887755333222 1112234567899999999999988889999999999999999999
Q ss_pred HHHhCCCceeEEEeCCCCCCCCCCCCCcc------ccc-----------ccccccHHHHHhcCccccccCCCCCEEEEec
Q 011049 361 LLAHAPHLFCCGIARSGSYNKTLTPFGFQ------TEF-----------RTLWEATNVYIEMSPITHANKIKKPILIIHG 423 (494)
Q Consensus 361 ~~~~~p~~~~a~v~~~~~~~~~~~~~~~~------~~~-----------~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G 423 (494)
++..+|+ ++++|+.+|........+... ... .........+...++...+.++++|+|+++|
T Consensus 217 ~a~~~p~-v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~P~lii~G 295 (346)
T 3fcy_A 217 CAALEPR-VRKVVSEYPFLSDYKRVWDLDLAKNAYQEITDYFRLFDPRHERENEVFTKLGYIDVKNLAKRIKGDVLMCVG 295 (346)
T ss_dssp HHHHSTT-CCEEEEESCSSCCHHHHHHTTCCCGGGHHHHHHHHHHCTTCTTHHHHHHHHGGGCHHHHGGGCCSEEEEEEE
T ss_pred HHHhCcc-ccEEEECCCcccCHHHHhhccccccchHHHHHHHHhcCCCcchHHHHHHHhCcccHHHHHHhcCCCEEEEee
Confidence 9999988 999999998754210000000 000 0000111223345666778889999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 424 EVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 424 ~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
++|..+| +.++.++++++.. +++++++++++|.+. ..+.+.+.+||++.
T Consensus 296 ~~D~~~~--~~~~~~~~~~~~~---~~~~~~~~~~gH~~~-----~~~~~~i~~fl~~l 344 (346)
T 3fcy_A 296 LMDQVCP--PSTVFAAYNNIQS---KKDIKVYPDYGHEPM-----RGFGDLAMQFMLEL 344 (346)
T ss_dssp TTCSSSC--HHHHHHHHTTCCS---SEEEEEETTCCSSCC-----TTHHHHHHHHHHTT
T ss_pred CCCCcCC--HHHHHHHHHhcCC---CcEEEEeCCCCCcCH-----HHHHHHHHHHHHHh
Confidence 9999998 8888777776653 689999999999986 35677889999763
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-24 Score=202.65 Aligned_cols=239 Identities=18% Similarity=0.185 Sum_probs=161.1
Q ss_pred ccEEEEEEc-CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 223 QKEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 223 ~~~~~~~~~-~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
..+.+++.+ .+|.++.+.+|+|+++++.+ ++|+||++||++... ..|.... .....++++||+|+
T Consensus 16 ~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~--~~p~vv~lHG~~~~~-----------~~~~~~~-~~~~~~~~~g~~vv 81 (280)
T 3i6y_A 16 WHKQYSHVSNTLNCAMRFAIYLPPQASTGA--KVPVLYWLSGLTCSD-----------ENFMQKA-GAQRLAAELGIAIV 81 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGGTTC--CEEEEEEECCTTCCS-----------SHHHHHS-CCHHHHHHHTCEEE
T ss_pred cEEEEEEeccccCCeeEEEEEeCCCCCCCC--CccEEEEecCCCCCh-----------hHHhhcc-cHHHHHhhCCeEEE
Confidence 356666765 57889999999999875433 499999999976322 1121111 12345567899999
Q ss_pred eCCCCCCC-----------CCCCCCC----C------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHH
Q 011049 302 AGPSIPII-----------GEGDKLP----N------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAH 360 (494)
Q Consensus 302 ~~~~~~~~-----------g~g~~~~----~------~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~ 360 (494)
.++.++.. |.|.++. . ..+.....+++ ++++.+...+ ++|++|+|||+||++++.
T Consensus 82 ~pd~~~~g~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~i~l~G~S~GG~~a~~ 157 (280)
T 3i6y_A 82 APDTSPRGEGVADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYVVNEL---PELIESMFPV-SDKRAIAGHSMGGHGALT 157 (280)
T ss_dssp EECSSCCSTTCCCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHH---HHHHHHHSSE-EEEEEEEEETHHHHHHHH
T ss_pred EeCCcccccccCcccccccccCccccccccCCCccchhhHHHHHHHHH---HHHHHHhCCC-CCCeEEEEECHHHHHHHH
Confidence 97753210 1111100 0 02223333343 3444444434 689999999999999999
Q ss_pred HHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCC--CCEEEEecCCCCCCCCCHHH-HH
Q 011049 361 LLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIK--KPILIIHGEVDDKVGLFPMQ-AE 437 (494)
Q Consensus 361 ~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~--~P~li~~G~~D~~v~~~~~~-~~ 437 (494)
++.++|++|+++++++|+.+....++.........-.....+...+|...+.+++ +|+|++||+.|..++ ... ++
T Consensus 158 ~a~~~p~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~--~~~~~~ 235 (280)
T 3i6y_A 158 IALRNPERYQSVSAFSPINNPVNCPWGQKAFTAYLGKDTDTWREYDASLLMRAAKQYVPALVDQGEADNFLA--EQLKPE 235 (280)
T ss_dssp HHHHCTTTCSCEEEESCCCCGGGSHHHHHHHHHHHCSCGGGTGGGCHHHHHHHCSSCCCEEEEEETTCTTHH--HHTCHH
T ss_pred HHHhCCccccEEEEeCCccccccCchHHHHHHHhcCCchHHHHhcCHHHHHHhcCCCccEEEEEeCCCcccc--chhhHH
Confidence 9999999999999999987643221110000000011233445667777777665 899999999999986 544 78
Q ss_pred HHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 438 RFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 438 ~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
+++++|++.+++++++++|+++|.+. .....+.+.++|+.++|+
T Consensus 236 ~~~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~~~~~l~~~~~~l~ 279 (280)
T 3i6y_A 236 VLEAAASSNNYPLELRSHEGYDHSYY---FIASFIEDHLRFHSNYLN 279 (280)
T ss_dssp HHHHHHHHTTCCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCceEEEeCCCCccHH---HHHHhHHHHHHHHHhhcc
Confidence 99999999999999999999999873 344677889999999885
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.92 E-value=7.2e-24 Score=200.38 Aligned_cols=234 Identities=15% Similarity=0.138 Sum_probs=165.4
Q ss_pred ccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEE
Q 011049 221 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 300 (494)
Q Consensus 221 ~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 300 (494)
....+.+++++.||.++.++++.|++ .++.|+||++||++... ...+ .....|+++||.|
T Consensus 53 ~~~~~~~~~~~~~g~~i~~~~~~P~~-----~~~~p~vv~~HG~~~~~----------~~~~-----~~~~~l~~~g~~v 112 (318)
T 1l7a_A 53 GVKVYRLTYKSFGNARITGWYAVPDK-----EGPHPAIVKYHGYNASY----------DGEI-----HEMVNWALHGYAT 112 (318)
T ss_dssp SEEEEEEEEEEGGGEEEEEEEEEESS-----CSCEEEEEEECCTTCCS----------GGGH-----HHHHHHHHTTCEE
T ss_pred CeEEEEEEEEccCCCEEEEEEEeeCC-----CCCccEEEEEcCCCCCC----------CCCc-----ccccchhhCCcEE
Confidence 34578899998899999999999986 23489999999976320 0111 2233778899999
Q ss_pred EeCCCCCCCCCCCCC-----------------CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHH
Q 011049 301 LAGPSIPIIGEGDKL-----------------PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 301 ~~~~~~~~~g~g~~~-----------------~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~ 363 (494)
+++++++........ ....+....+.|+.++++++.++..+|+++|+++|||+||.+++.++.
T Consensus 113 ~~~d~rg~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~ 192 (318)
T 1l7a_A 113 FGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAA 192 (318)
T ss_dssp EEECCTTTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHH
T ss_pred EEecCCCCCCCCCcccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhc
Confidence 998876543332211 011123567899999999999998888999999999999999999999
Q ss_pred hCCCceeEEEeCCCCCCCCC------CCCCcccc--c-c---cccccH---HHHHhcCccccccCCCCCEEEEecCCCCC
Q 011049 364 HAPHLFCCGIARSGSYNKTL------TPFGFQTE--F-R---TLWEAT---NVYIEMSPITHANKIKKPILIIHGEVDDK 428 (494)
Q Consensus 364 ~~p~~~~a~v~~~~~~~~~~------~~~~~~~~--~-~---~~~~~~---~~~~~~sp~~~~~~~~~P~li~~G~~D~~ 428 (494)
.+|+ ++++|+.+|...... ....+... . . ...... ......++...+.++++|+|+++|++|..
T Consensus 193 ~~~~-~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~g~~D~~ 271 (318)
T 1l7a_A 193 LSDI-PKAAVADYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKV 271 (318)
T ss_dssp HCSC-CSEEEEESCCSCCHHHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEETTCSS
T ss_pred cCCC-ccEEEecCCcccCHHHHHhcCCcCccHHHHHHHhccCCcccHHHHHHhhccccHHHHHhhCCCCEEEEeccCCCC
Confidence 9976 677777777543100 00000000 0 0 000001 11223456677888899999999999999
Q ss_pred CCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 429 VGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 429 v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
+| +.++.++++.+.. +++++++++++|... ....+.+.+||.+++++
T Consensus 272 ~~--~~~~~~~~~~l~~---~~~~~~~~~~~H~~~-----~~~~~~~~~fl~~~l~g 318 (318)
T 1l7a_A 272 TP--PSTVFAAYNHLET---KKELKVYRYFGHEYI-----PAFQTEKLAFFKQILKG 318 (318)
T ss_dssp SC--HHHHHHHHHHCCS---SEEEEEETTCCSSCC-----HHHHHHHHHHHHHHHCC
T ss_pred CC--cccHHHHHhhcCC---CeeEEEccCCCCCCc-----chhHHHHHHHHHHHhCC
Confidence 98 8888888887754 489999999999832 35688899999999864
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=202.10 Aligned_cols=239 Identities=17% Similarity=0.090 Sum_probs=167.0
Q ss_pred cccccEEEEEEcCCCceEEEEEEeCCCCC-CCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCe
Q 011049 220 ASLQKEMIKYQRKDGVPLTATLYLPPGYD-QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF 298 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~-~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~ 298 (494)
...+.+.+.|.+.+|..+.+.+| |+... ....++.|+||++||++|..+. ...| ...+..|+++||
T Consensus 15 ~~~~~~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~--------~~~~----~~~~~~l~~~G~ 81 (283)
T 3bjr_A 15 LYFQGMQVIKQKLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIP--------VAQA----ESLAMAFAGHGY 81 (283)
T ss_dssp --CCSSEEEEEECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCC--------HHHH----HHHHHHHHTTTC
T ss_pred cCCCCcceEEeecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCC--------cccc----HHHHHHHHhCCc
Confidence 34467788999999999999999 76521 0012348999999998743211 0111 134557788999
Q ss_pred EEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEecChHHHHHHHHHHhCCCc-------
Q 011049 299 AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPHL------- 368 (494)
Q Consensus 299 ~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~~~p~~------- 368 (494)
.|+.+++++....+ ..+ .....|+.++++++.+.. .+|+++|+|+|||+||++++.++.++|++
T Consensus 82 ~v~~~d~~g~~~~~-----~~~-~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~ 155 (283)
T 3bjr_A 82 QAFYLEYTLLTDQQ-----PLG-LAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNV 155 (283)
T ss_dssp EEEEEECCCTTTCS-----SCB-THHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTC
T ss_pred EEEEEeccCCCccc-----cCc-hhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCC
Confidence 99998876532211 011 234667888888888753 36778999999999999999999999987
Q ss_pred ------eeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHH
Q 011049 369 ------FCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDA 442 (494)
Q Consensus 369 ------~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~ 442 (494)
++++|+.+|..+.... +.............+...++...+.++++|+|++||++|..+| +.++.++++.
T Consensus 156 ~~~~~~~~~~v~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p--~~~~~~~~~~ 230 (283)
T 3bjr_A 156 TPAMLKPNNVVLGYPVISPLLG---FPKDDATLATWTPTPNELAADQHVNSDNQPTFIWTTADDPIVP--ATNTLAYATA 230 (283)
T ss_dssp CHHHHCCSSEEEESCCCCTTSB---C--------CCCCCGGGGCGGGSCCTTCCCEEEEEESCCTTSC--THHHHHHHHH
T ss_pred CcCCCCccEEEEcCCccccccc---cccccchHHHHHHHhHhcCHHHhccCCCCCEEEEEcCCCCCCC--hHHHHHHHHH
Confidence 8999999998753211 0000000000011234457777788889999999999999998 8999999999
Q ss_pred HHhCCCcEEEEEcCCCCCccCCcc------------cHHHHHHHHHHHHHHh
Q 011049 443 LKGHGALSRLVLLPFEHHVYAARE------------NVMHVIWETDRWLQKY 482 (494)
Q Consensus 443 l~~~g~~~~~~~~~~~~H~~~~~~------------~~~~~~~~~~~fl~~~ 482 (494)
|++.+.+++++++++++|.+.... ....+.+.+.+||+++
T Consensus 231 l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 231 LATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp HHHTTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred HHHCCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 999999999999999999865322 1247788899999864
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.9e-24 Score=200.55 Aligned_cols=231 Identities=15% Similarity=0.103 Sum_probs=169.1
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEe
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 302 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 302 (494)
..+.+++++ +|.++.++++.|+ +.|+||++||++.. ...| ......|+++||.|+.
T Consensus 5 ~~~~~~~~~-~g~~l~~~~~~p~--------~~p~vv~~HG~~~~-----------~~~~----~~~~~~l~~~g~~v~~ 60 (290)
T 3ksr_A 5 KLSSIEIPV-GQDELSGTLLTPT--------GMPGVLFVHGWGGS-----------QHHS----LVRAREAVGLGCICMT 60 (290)
T ss_dssp EEEEEEEEE-TTEEEEEEEEEEE--------SEEEEEEECCTTCC-----------TTTT----HHHHHHHHTTTCEEEC
T ss_pred ceeeEEecC-CCeEEEEEEecCC--------CCcEEEEeCCCCCC-----------cCcH----HHHHHHHHHCCCEEEE
Confidence 457778886 7889999999997 27999999997521 1112 2355678889999999
Q ss_pred CCCCCCCCCCCCCC--CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCC
Q 011049 303 GPSIPIIGEGDKLP--NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 380 (494)
Q Consensus 303 ~~~~~~~g~g~~~~--~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~ 380 (494)
++.++ +|.+.. .........+|+.++++++.+++.+|+++|+++|||+||++++.++.++| ++++++.+|...
T Consensus 61 ~d~~G---~g~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~ 135 (290)
T 3ksr_A 61 FDLRG---HEGYASMRQSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALY 135 (290)
T ss_dssp CCCTT---SGGGGGGTTTCBHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCC
T ss_pred eecCC---CCCCCCCcccccHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchh
Confidence 77654 444322 12234667899999999999988788899999999999999999999987 677777777654
Q ss_pred CCCCCCCcccccc-------cccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEE
Q 011049 381 KTLTPFGFQTEFR-------TLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLV 453 (494)
Q Consensus 381 ~~~~~~~~~~~~~-------~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~ 453 (494)
... .+....... ..+.....+...++...+.++++|+|++||++|..++ ..++..+++.++..+ +++++
T Consensus 136 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~--~~~~~~~~~~~~~~~-~~~~~ 211 (290)
T 3ksr_A 136 KDA-HWDQPKVSLNADPDLMDYRRRALAPGDNLALAACAQYKGDVLLVEAENDVIVP--HPVMRNYADAFTNAR-SLTSR 211 (290)
T ss_dssp CSS-CTTSBHHHHHHSTTHHHHTTSCCCGGGCHHHHHHHHCCSEEEEEEETTCSSSC--HHHHHHHHHHTTTSS-EEEEE
T ss_pred hhh-hhhcccccccCChhhhhhhhhhhhhccccHHHHHHhcCCCeEEEEecCCcccC--hHHHHHHHHHhccCC-CceEE
Confidence 321 111110000 0001111112233344567788999999999999998 999999999998766 79999
Q ss_pred EcCCCCCccCCcccHHHHHHHHHHHHHHhcCCC
Q 011049 454 LLPFEHHVYAARENVMHVIWETDRWLQKYCLSN 486 (494)
Q Consensus 454 ~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~ 486 (494)
++++++|.+...+....+.+.+.+||++++.+.
T Consensus 212 ~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~~ 244 (290)
T 3ksr_A 212 VIAGADHALSVKEHQQEYTRALIDWLTEMVVGR 244 (290)
T ss_dssp EETTCCTTCCSHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EcCCCCCCCCcchHHHHHHHHHHHHHHHHhcCC
Confidence 999999998765567788899999999998653
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.91 E-value=9.7e-24 Score=216.29 Aligned_cols=250 Identities=14% Similarity=0.209 Sum_probs=175.1
Q ss_pred cccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhH-HHHHhCCeEE
Q 011049 222 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSS-LIFLARRFAV 300 (494)
Q Consensus 222 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~G~~v 300 (494)
+..+.+++++.||.+|.+++++|++. +++|+||++||.+... . .. ......|.... ... +.|+++||+|
T Consensus 23 ~~~~~v~i~~~DG~~L~~~~~~P~~~-----~~~P~vl~~hgyg~~~-~-~~--~~~~~~~~~~~-~~~~~~la~~Gy~V 92 (615)
T 1mpx_A 23 YIKREVMIPMRDGVKLHTVIVLPKGA-----KNAPIVLTRTPYDASG-R-TE--RLASPHMKDLL-SAGDDVFVEGGYIR 92 (615)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTC-----CSEEEEEEEESSCHHH-H-TC--SSCCSSHHHHS-CGGGHHHHHTTCEE
T ss_pred CEEEEEEEECCCCCEEEEEEEeCCCC-----CCeeEEEEEcCCCCcc-c-cc--ccccccccccc-chhHHHHHhCCeEE
Confidence 45678899999999999999999862 3489999999743110 0 00 00000010000 011 6889999999
Q ss_pred EeCCCCCCCCCCCCCCCc-----hhHH---HHHHHHHHHHHHHHHc-CCCCCCcEEEEecChHHHHHHHHHHhCCCceeE
Q 011049 301 LAGPSIPIIGEGDKLPND-----RFVE---QLVSSAEAAVEEVVRR-GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCC 371 (494)
Q Consensus 301 ~~~~~~~~~g~g~~~~~~-----~~~~---~~~~d~~~~v~~l~~~-~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a 371 (494)
+.+|.||..+++...... .+.. ..++|+.++++||.++ ++.| .||+++|+||||++++++++.+|++++|
T Consensus 93 v~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~-~rv~l~G~S~GG~~al~~a~~~~~~l~a 171 (615)
T 1mpx_A 93 VFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN-GKVGMIGSSYEGFTVVMALTNPHPALKV 171 (615)
T ss_dssp EEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTSCCTTEEE
T ss_pred EEECCCCCCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCC-CeEEEEecCHHHHHHHHHhhcCCCceEE
Confidence 998888766554432211 0121 5689999999999998 7776 5999999999999999999988999999
Q ss_pred EEeCCCCCCCCC-CCC---Cc-cc-----------------------cc----------------------ccccc----
Q 011049 372 GIARSGSYNKTL-TPF---GF-QT-----------------------EF----------------------RTLWE---- 397 (494)
Q Consensus 372 ~v~~~~~~~~~~-~~~---~~-~~-----------------------~~----------------------~~~~~---- 397 (494)
+|+.+|+.+... ..+ +. .. .. ...|.
T Consensus 172 ~v~~~~~~d~~~~~~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 251 (615)
T 1mpx_A 172 AVPESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTE 251 (615)
T ss_dssp EEEESCCCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHHH
T ss_pred EEecCCccccccccccccCCeehhhhHHHHHHhhcccCCcccccccchhHHHHHhhcCCccchhhhhccccchHHHHHHh
Confidence 999999988422 111 00 00 00 00011
Q ss_pred ---cHHHHHhcCccccccC--CCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCc---EEEEEcCCCCCccCC-----
Q 011049 398 ---ATNVYIEMSPITHANK--IKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGAL---SRLVLLPFEHHVYAA----- 464 (494)
Q Consensus 398 ---~~~~~~~~sp~~~~~~--~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~---~~~~~~~~~~H~~~~----- 464 (494)
..+.|.+.||+.++++ |++|+|++||..|.+ + ..++.+++++|+++|.+ .++++.|. +|+...
T Consensus 252 ~~~~d~~w~~~Sp~~~~~~~~I~~P~Lii~G~~D~~-~--~~~~~~~~~aL~~~g~p~~~~~lvigp~-~H~~~~~~~~~ 327 (615)
T 1mpx_A 252 HAAYDAFWQEQALDKVMARTPLKVPTMWLQGLWDQE-D--MWGAIHSYAAMEPRDKRNTLNYLVMGPW-RHSQVNYDGSA 327 (615)
T ss_dssp TCSSCHHHHTTCHHHHHHTSCCCSCEEEEEETTCSS-C--SSHHHHHHHHHGGGCTTSSSEEEEEESC-CTTGGGSCCSE
T ss_pred CCCcChhhhhcChhhhhhccCCCCCEEEeecccCcc-c--cccHHHHHHHHHhhcCCCcCCEEEECCC-CCCCccccccc
Confidence 1134566799999999 999999999999997 6 78999999999998643 88999988 697511
Q ss_pred -------cccH-HHHHHHHHHHHHHhcCCC
Q 011049 465 -------RENV-MHVIWETDRWLQKYCLSN 486 (494)
Q Consensus 465 -------~~~~-~~~~~~~~~fl~~~l~~~ 486 (494)
.+.. ....+.+++||++||++.
T Consensus 328 ~~~~~f~~~~~~~~~~~~~~~wfd~~Lkg~ 357 (615)
T 1mpx_A 328 LGALNFEGDTARQFRHDVLRPFFDQYLVDG 357 (615)
T ss_dssp ETTEECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred cCccccCcccchhhhhhHHHHHHHHHhcCC
Confidence 1111 223577899999999975
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=3e-24 Score=199.39 Aligned_cols=239 Identities=16% Similarity=0.194 Sum_probs=160.2
Q ss_pred ccEEEEEEc-CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 223 QKEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 223 ~~~~~~~~~-~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
..+.+++.+ .+|.++.+.+|+|+++++.+ ++|+||++||+++... .|.... .....++++||+|+
T Consensus 14 ~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~--~~P~vv~lHG~~~~~~-----------~~~~~~-~~~~~~~~~g~~vv 79 (280)
T 3ls2_A 14 WHKQYTHSAVSTHCTMRFAVFLPPGASESN--KVPVLYWLSGLTCTDE-----------NFMQKA-GAFKKAAELGIAIV 79 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECTTCBTTB--CEEEEEEECCTTCCSH-----------HHHHHS-CCHHHHHHHTCEEE
T ss_pred eEEEEEEechhcCCceEEEEEcCCCCCCCC--CcCEEEEeCCCCCChh-----------hhhcch-hHHHHHhhCCeEEE
Confidence 356667765 47889999999999876443 4999999999763321 121101 12345667899999
Q ss_pred eCCCCCC--C---------CCCCCCC----------CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHH
Q 011049 302 AGPSIPI--I---------GEGDKLP----------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAH 360 (494)
Q Consensus 302 ~~~~~~~--~---------g~g~~~~----------~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~ 360 (494)
+++.++. . |.|..+. ...+.....+++. .++.+...+ ++|++|+|+|+||++|+.
T Consensus 80 ~~d~~~~g~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~-~~~~~l~G~S~GG~~a~~ 155 (280)
T 3ls2_A 80 APDTSPRGDNVPNEDSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELP---ALIEQHFPV-TSTKAISGHSMGGHGALM 155 (280)
T ss_dssp ECCSSCCSTTSCCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHH---HHHHHHSSE-EEEEEEEEBTHHHHHHHH
T ss_pred EeCCcccccccccccccccccCCccccccccccccccccHHHHHHHHHH---HHHHhhCCC-CCCeEEEEECHHHHHHHH
Confidence 9774311 0 1111100 0122333334433 444444333 489999999999999999
Q ss_pred HHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCC----CCEEEEecCCCCCCCCCHHH-
Q 011049 361 LLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIK----KPILIIHGEVDDKVGLFPMQ- 435 (494)
Q Consensus 361 ~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~----~P~li~~G~~D~~v~~~~~~- 435 (494)
++.++|++|+++++++|+.+....++.............+.+...+|...+.+++ +|+|++||+.|..++ ...
T Consensus 156 ~a~~~p~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~~ 233 (280)
T 3ls2_A 156 IALKNPQDYVSASAFSPIVNPINCPWGVKAFTGYLGADKTTWAQYDSCKLMAKAEQSNYLPMLVSQGDADNFLD--EQLK 233 (280)
T ss_dssp HHHHSTTTCSCEEEESCCSCGGGSHHHHHHHHHHHCSCGGGTGGGCHHHHHHTCCGGGCCCEEEEEETTCTTCC--CCCC
T ss_pred HHHhCchhheEEEEecCccCcccCcchhhHHHhhcCchHHHHHhcCHHHHHHhccccCCCcEEEEEeCCCcccC--Cchh
Confidence 9999999999999999987643221110000000011223445567776666664 599999999999987 533
Q ss_pred HHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 436 AERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 436 ~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
+++++++|++.++++++.++|+++|.+. .....+...++|+.++|+
T Consensus 234 ~~~~~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~~~~~~~~~~~~l~ 279 (280)
T 3ls2_A 234 PQNLVAVAKQKDYPLTLEMQTGYDHSYF---FISSFIDQHLVFHHQYLS 279 (280)
T ss_dssp HHHHHHHHHHHTCCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCceEEEeCCCCCchh---hHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999999999874 244667788999999886
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-24 Score=202.06 Aligned_cols=242 Identities=18% Similarity=0.192 Sum_probs=156.8
Q ss_pred cEEEEEEc-CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEe
Q 011049 224 KEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 302 (494)
Q Consensus 224 ~~~~~~~~-~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 302 (494)
.+.+++.+ .+|..+.+.+|+|+++.+ +++|+||++||+++... .|.... .....++++||+|++
T Consensus 16 ~~~~~~~s~~~~~~~~~~v~~P~~~~~---~~~p~vv~lHG~~~~~~-----------~~~~~~-~~~~~~~~~g~~vv~ 80 (282)
T 3fcx_A 16 QKVFEHDSVELNCKMKFAVYLPPKAET---GKCPALYWLSGLTCTEQ-----------NFISKS-GYHQSASEHGLVVIA 80 (282)
T ss_dssp EEEEEEEETTTTEEEEEEEEECGGGGT---SCEEEEEEECCTTCCSH-----------HHHHHS-CCHHHHHHHTCEEEE
T ss_pred EEEEEEEchhcCCeeEEEEEcCCCCCC---CCCCEEEEEcCCCCCcc-----------chhhcc-hHHHHhhcCCeEEEE
Confidence 44555553 578899999999987543 34899999999864321 121111 123567889999999
Q ss_pred CCC--CCCCCCCC----------CC----CCchhHH--HHHHH-HHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHH
Q 011049 303 GPS--IPIIGEGD----------KL----PNDRFVE--QLVSS-AEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 303 ~~~--~~~~g~g~----------~~----~~~~~~~--~~~~d-~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~ 363 (494)
++. +|..+.|. .. ....+.. ....+ +..+++++.+...+|++||+|+|+|+||++|+.++.
T Consensus 81 ~d~~~rG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~ 160 (282)
T 3fcx_A 81 PDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICAL 160 (282)
T ss_dssp ECSCSSCCCC--------CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHH
T ss_pred eccccCccccccccccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHH
Confidence 886 43322111 10 1111111 11222 234455555455588999999999999999999999
Q ss_pred hCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccC---CCCCEEEEecCCCCCCCCCHHH--HHH
Q 011049 364 HAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANK---IKKPILIIHGEVDDKVGLFPMQ--AER 438 (494)
Q Consensus 364 ~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~---~~~P~li~~G~~D~~v~~~~~~--~~~ 438 (494)
++|++|+++++++|+.+.....+...............+...+|...+.+ +++|+|++||++|..+| ..+ +++
T Consensus 161 ~~p~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~~~~~~ 238 (282)
T 3fcx_A 161 KNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLL--DGQLLPDN 238 (282)
T ss_dssp TSTTTSSCEEEESCCCCGGGSHHHHHHHHHHHC---CCGGGGCHHHHHTTCC---CCEEEEEETTCHHHH--TTSSCHHH
T ss_pred hCcccceEEEEeCCccCcccCchhHHHHHHhcCCchhhhhhcCHHHHHHhcccCCCcEEEEcCCCCcccc--cchhhHHH
Confidence 99999999999999876332111100000000011122334455544444 47999999999999875 343 568
Q ss_pred HHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 439 FFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 439 ~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
++++|++.++++++.+||+++|.+. .....+.+.++|+.++|++
T Consensus 239 ~~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~~~~~~~~~~~~l~~ 282 (282)
T 3fcx_A 239 FIAACTEKKIPVVFRLQEDYDHSYY---FIATFITDHIRHHAKYLNA 282 (282)
T ss_dssp HHHHHHHTTCCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCceEEEECCCCCcCHH---HHHhhhHHHHHHHHHhhcC
Confidence 9999999999999999999999874 2446777889999998863
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-23 Score=190.29 Aligned_cols=211 Identities=16% Similarity=0.111 Sum_probs=157.4
Q ss_pred EEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCC
Q 011049 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 304 (494)
Q Consensus 225 ~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 304 (494)
+.+++++.||.++.++++.|++ ++.|+||++||.+.. ...+ ......|+++||.|++++
T Consensus 4 ~~~~~~~~~g~~l~~~~~~p~~------~~~p~vv~~hG~~~~-----------~~~~----~~~~~~l~~~g~~v~~~d 62 (236)
T 1zi8_A 4 EGISIQSYDGHTFGALVGSPAK------APAPVIVIAQDIFGV-----------NAFM----RETVSWLVDQGYAAVCPD 62 (236)
T ss_dssp TTCCEECTTSCEECEEEECCSS------CSEEEEEEECCTTBS-----------CHHH----HHHHHHHHHTTCEEEEEC
T ss_pred ceEEEecCCCCeEEEEEECCCC------CCCCEEEEEcCCCCC-----------CHHH----HHHHHHHHhCCcEEEecc
Confidence 4467888899999999999874 237999999996421 1111 234567888999999977
Q ss_pred CCCCCCCCCCCC--------------CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCcee
Q 011049 305 SIPIIGEGDKLP--------------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFC 370 (494)
Q Consensus 305 ~~~~~g~g~~~~--------------~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~ 370 (494)
.++....+.... ..........|+.++++++.++..++ ++++++|||+||.+++.++..+| ++
T Consensus 63 ~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~--~~ 139 (236)
T 1zi8_A 63 LYARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY--VD 139 (236)
T ss_dssp GGGGTSTTCBCCTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC--SS
T ss_pred ccccCCCcccccccchhhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC--cc
Confidence 653322211100 01123455789999999998876545 69999999999999999999997 89
Q ss_pred EEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcE
Q 011049 371 CGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALS 450 (494)
Q Consensus 371 a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~ 450 (494)
++++.+|.... ++...+.++++|+|+++|++|..+| ..+++++++.+++.+ ++
T Consensus 140 ~~v~~~~~~~~------------------------~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~~-~~ 192 (236)
T 1zi8_A 140 RAVGYYGVGLE------------------------KQLNKVPEVKHPALFHMGGQDHFVP--APSRQLITEGFGANP-LL 192 (236)
T ss_dssp EEEEESCSSGG------------------------GCGGGGGGCCSCEEEEEETTCTTSC--HHHHHHHHHHHTTCT-TE
T ss_pred EEEEecCcccc------------------------cchhhhhhcCCCEEEEecCCCCCCC--HHHHHHHHHHHHhCC-Cc
Confidence 99988774210 2334566788999999999999998 999999999998766 79
Q ss_pred EEEEcCCCCCccCCcc-------cHHHHHHHHHHHHHHhcCCC
Q 011049 451 RLVLLPFEHHVYAARE-------NVMHVIWETDRWLQKYCLSN 486 (494)
Q Consensus 451 ~~~~~~~~~H~~~~~~-------~~~~~~~~~~~fl~~~l~~~ 486 (494)
+++++++++|.+.... ......+.+.+||+++++.+
T Consensus 193 ~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 235 (236)
T 1zi8_A 193 QVHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVPLQSRK 235 (236)
T ss_dssp EEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGCC--
T ss_pred eEEEECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999876432 23567889999999998753
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.9e-23 Score=184.67 Aligned_cols=209 Identities=18% Similarity=0.173 Sum_probs=159.6
Q ss_pred ccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEE
Q 011049 221 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 300 (494)
Q Consensus 221 ~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 300 (494)
.+..+.+++++ +|.++.++++.|++ +.|+||++||.+.. ...+. .......|+++||.|
T Consensus 9 ~~~~~~~~~~~-~g~~l~~~~~~p~~-------~~p~vv~~hG~~~~-----------~~~~~--~~~~~~~l~~~G~~v 67 (223)
T 2o2g_A 9 QPQEYAVSVSV-GEVKLKGNLVIPNG-------ATGIVLFAHGSGSS-----------RYSPR--NRYVAEVLQQAGLAT 67 (223)
T ss_dssp CCCEEEEEEEE-TTEEEEEEEECCTT-------CCEEEEEECCTTCC-----------TTCHH--HHHHHHHHHHHTCEE
T ss_pred CceeeEEEEec-CCeEEEEEEecCCC-------CceEEEEecCCCCC-----------CCccc--hHHHHHHHHHCCCEE
Confidence 34577888886 89999999999875 27999999997521 11110 113455778899999
Q ss_pred EeCCCCCCCCCCCCCCCc------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEe
Q 011049 301 LAGPSIPIIGEGDKLPND------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIA 374 (494)
Q Consensus 301 ~~~~~~~~~g~g~~~~~~------~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~ 374 (494)
+.++.+ |+|.+.... ...+....|+.++++++..+..+|+++++++|||+||.+++.++..+|++++++|+
T Consensus 68 ~~~d~~---g~g~s~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~ 144 (223)
T 2o2g_A 68 LLIDLL---TQEEEEIDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVS 144 (223)
T ss_dssp EEECSS---CHHHHHHHHHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEE
T ss_pred EEEcCC---CcCCCCccchhhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEE
Confidence 997665 444331110 23456678999999999999888999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEE
Q 011049 375 RSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVL 454 (494)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~ 454 (494)
.+|..+.. ...+.++++|+|+++|++|..+| .. ..+.+++.+.++++++
T Consensus 145 ~~~~~~~~-------------------------~~~~~~~~~P~l~i~g~~D~~~~--~~----~~~~~~~~~~~~~~~~ 193 (223)
T 2o2g_A 145 RGGRPDLA-------------------------PSALPHVKAPTLLIVGGYDLPVI--AM----NEDALEQLQTSKRLVI 193 (223)
T ss_dssp ESCCGGGC-------------------------TTTGGGCCSCEEEEEETTCHHHH--HH----HHHHHHHCCSSEEEEE
T ss_pred eCCCCCcC-------------------------HHHHhcCCCCEEEEEccccCCCC--HH----HHHHHHhhCCCeEEEE
Confidence 98853310 12345678999999999999864 32 3455666677899999
Q ss_pred cCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 455 LPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 455 ~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
+++++|.+...+....+.+.+.+||+++|+
T Consensus 194 ~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 223 (223)
T 2o2g_A 194 IPRASHLFEEPGALTAVAQLASEWFMHYLR 223 (223)
T ss_dssp ETTCCTTCCSTTHHHHHHHHHHHHHHHHCC
T ss_pred eCCCCcccCChHHHHHHHHHHHHHHHHhcC
Confidence 999999987656667889999999999874
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-23 Score=214.70 Aligned_cols=251 Identities=16% Similarity=0.155 Sum_probs=176.7
Q ss_pred cccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhH-HHHHhCCeEE
Q 011049 222 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSS-LIFLARRFAV 300 (494)
Q Consensus 222 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~G~~v 300 (494)
+..+.+++++.||.+|.+++|+|++. +++|+||+.||-+... .. ........|... .... +.|+++||+|
T Consensus 35 ~~~~~v~i~~~DG~~L~~~l~~P~~~-----~~~PvIl~~hpyg~~~--~~-~~~~~~~~~~~~-~~~~~~~la~~GyaV 105 (652)
T 2b9v_A 35 YIKREVMVPMRDGVKLYTVIVIPKNA-----RNAPILLTRTPYNAKG--RA-NRVPNALTMREV-LPQGDDVFVEGGYIR 105 (652)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTC-----CSEEEEEEEESSCHHH--HT-CSSTTCSSHHHH-SCGGGHHHHHTTCEE
T ss_pred cEEEEEEEECCCCcEEEEEEEecCCC-----CCccEEEEECCCCCCc--cc-cccccccccccc-ccchHHHHHhCCCEE
Confidence 44678899999999999999999863 3489999999633110 00 000000000000 0112 6889999999
Q ss_pred EeCCCCCCCCCCCCCCCc-----hhH---HHHHHHHHHHHHHHHHc-CCCCCCcEEEEecChHHHHHHHHHHhCCCceeE
Q 011049 301 LAGPSIPIIGEGDKLPND-----RFV---EQLVSSAEAAVEEVVRR-GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCC 371 (494)
Q Consensus 301 ~~~~~~~~~g~g~~~~~~-----~~~---~~~~~d~~~~v~~l~~~-~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a 371 (494)
+.+|.||..+++...... .+. ...++|+.++++||.++ +++| .||+++|+||||++++.+++.+|+.|+|
T Consensus 106 v~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d-~rvgl~G~SyGG~~al~~a~~~~~~lka 184 (652)
T 2b9v_A 106 VFQDIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESN-GRVGMTGSSYEGFTVVMALLDPHPALKV 184 (652)
T ss_dssp EEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEE-EEEEEEEEEHHHHHHHHHHTSCCTTEEE
T ss_pred EEEecCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCC-CCEEEEecCHHHHHHHHHHhcCCCceEE
Confidence 999988876665543221 111 15689999999999999 8777 5999999999999999999988999999
Q ss_pred EEeCCCCCCCCC-CCC---Cc-cc-------c--------------ccc------------------------ccc----
Q 011049 372 GIARSGSYNKTL-TPF---GF-QT-------E--------------FRT------------------------LWE---- 397 (494)
Q Consensus 372 ~v~~~~~~~~~~-~~~---~~-~~-------~--------------~~~------------------------~~~---- 397 (494)
+|+.+++.++.. ..+ +. .. . ... .|.
T Consensus 185 ~v~~~~~~d~~~~d~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (652)
T 2b9v_A 185 AAPESPMVDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHA 264 (652)
T ss_dssp EEEEEECCCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHH
T ss_pred EEecccccccccccceecCCchhhhhHHHHHHhhhcccCcccccccchHHHHHHhhcCchhhHHHhhccccchHHHHHHh
Confidence 999999988532 111 00 00 0 000 000
Q ss_pred ---cHHHHHhcCccccccC--CCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC--CcEEEEEcCCCCCccCC------
Q 011049 398 ---ATNVYIEMSPITHANK--IKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG--ALSRLVLLPFEHHVYAA------ 464 (494)
Q Consensus 398 ---~~~~~~~~sp~~~~~~--~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~H~~~~------ 464 (494)
..+.|...||+.++++ |++|+|++||..|.+ + ..++.+++++|++++ ++.++++.|. +|+...
T Consensus 265 ~p~~d~yw~~~Sp~~~~~~~~I~~PvLiv~G~~D~~-~--~~~~~~~~~aL~~~g~~~~~~lvigp~-~H~~~~~~~~~~ 340 (652)
T 2b9v_A 265 HPAYDAFWQGQALDKILAQRKPTVPMLWEQGLWDQE-D--MWGAIHAWQALKDADVKAPNTLVMGPW-RHSGVNYNGSTL 340 (652)
T ss_dssp CCSSSHHHHTTCHHHHHHHHCCCSCEEEEEETTCSS-C--SSHHHHHHHHHHHTTCSSCEEEEEESC-CTTGGGSCCSEE
T ss_pred CCCCChHHhcCChhhhhhcCCCCCCEEEEeecCCcc-c--cccHHHHHHHHHhcCCCCCCEEEECCC-CCCCcccccccC
Confidence 0123456799999999 999999999999997 5 678999999999998 8899999887 797521
Q ss_pred ------cc-cHHHHHHHHHHHHHHhcCCC
Q 011049 465 ------RE-NVMHVIWETDRWLQKYCLSN 486 (494)
Q Consensus 465 ------~~-~~~~~~~~~~~fl~~~l~~~ 486 (494)
.+ ......+.+++||++||++.
T Consensus 341 ~~~~f~~~~~~~~~~~~~~~wfd~~Lkg~ 369 (652)
T 2b9v_A 341 GPLEFEGDTAHQYRRDVFRPFFDEYLKPG 369 (652)
T ss_dssp TTEECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred CccccccccchhhhhhHHHHHHHHHhCCC
Confidence 01 11234678899999999975
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-23 Score=197.12 Aligned_cols=233 Identities=17% Similarity=0.152 Sum_probs=165.4
Q ss_pred cccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHH-hCCe
Q 011049 220 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRF 298 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~ 298 (494)
..+..+.+++++.||..+.+++|.|.+ ++.|+||++|||||..++ ...+ ......|+ +.||
T Consensus 56 ~~~~~~~~~i~~~~G~~i~~~~~~P~~------~~~p~vv~~HGgG~~~g~--------~~~~----~~~~~~la~~~g~ 117 (317)
T 3qh4_A 56 AGVAVADDVVTGEAGRPVPVRIYRAAP------TPAPVVVYCHAGGFALGN--------LDTD----HRQCLELARRARC 117 (317)
T ss_dssp HCCEEEEEEEECTTSCEEEEEEEECSC------SSEEEEEEECCSTTTSCC--------TTTT----HHHHHHHHHHHTS
T ss_pred CcceEEEEEecCCCCCeEEEEEEecCC------CCCcEEEEECCCcCccCC--------hHHH----HHHHHHHHHHcCC
Confidence 345678899999999999999999975 237999999998864322 1122 23444666 4699
Q ss_pred EEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHhCCC----ceeE
Q 011049 299 AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHAPH----LFCC 371 (494)
Q Consensus 299 ~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~~p~----~~~a 371 (494)
.|+.++++...++. ....++|+.++++|+.++ ..+|++||+|+|+|+||++++.++.+.++ .+++
T Consensus 118 ~vv~~dyr~~p~~~--------~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~ 189 (317)
T 3qh4_A 118 AVVSVDYRLAPEHP--------YPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIF 189 (317)
T ss_dssp EEEEECCCCTTTSC--------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCE
T ss_pred EEEEecCCCCCCCC--------CchHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeE
Confidence 99998887543321 134577888999999885 34788999999999999999999987655 4899
Q ss_pred EEeCCCCCCCCCCCCCccccc-cccccc------HHHHH-------hcCccccccCCC--CCEEEEecCCCCCCCCCHHH
Q 011049 372 GIARSGSYNKTLTPFGFQTEF-RTLWEA------TNVYI-------EMSPITHANKIK--KPILIIHGEVDDKVGLFPMQ 435 (494)
Q Consensus 372 ~v~~~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~-------~~sp~~~~~~~~--~P~li~~G~~D~~v~~~~~~ 435 (494)
.++++|+.+... ........ ...+.. ...|. ..+|... ..++ +|+||+||+.|.. ..+
T Consensus 190 ~vl~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~l~~lpP~li~~G~~D~~----~~~ 263 (317)
T 3qh4_A 190 QLLHQPVLDDRP-TASRSEFRATPAFDGEAASLMWRHYLAGQTPSPESVPGRR-GQLAGLPATLITCGEIDPF----RDE 263 (317)
T ss_dssp EEEESCCCCSSC-CHHHHHTTTCSSSCHHHHHHHHHHHHTTCCCCTTTCGGGC-SCCTTCCCEEEEEEEESTT----HHH
T ss_pred EEEECceecCCC-CcCHHHhcCCCCcCHHHHHHHHHHhcCCCCCCcccCCCcc-cccCCCCceeEEecCcCCC----chh
Confidence 999999987541 11000000 000100 01111 1123222 1222 5999999999997 457
Q ss_pred HHHHHHHHHhCCCcEEEEEcCCCCCccCC----cccHHHHHHHHHHHHHHhcC
Q 011049 436 AERFFDALKGHGALSRLVLLPFEHHVYAA----RENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 436 ~~~~~~~l~~~g~~~~~~~~~~~~H~~~~----~~~~~~~~~~~~~fl~~~l~ 484 (494)
+.+++++|++.++++++++|++++|+|.. .+....+++.+.+||.++|.
T Consensus 264 ~~~~a~~l~~~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l~ 316 (317)
T 3qh4_A 264 VLDYAQRLLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFY 316 (317)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHhC
Confidence 88999999999999999999999999642 24456888999999999885
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-23 Score=195.61 Aligned_cols=236 Identities=15% Similarity=0.129 Sum_probs=159.2
Q ss_pred ccEEEEEEc-CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 223 QKEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 223 ~~~~~~~~~-~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
..+.+++.+ .+|.++.+.+|+|+++. +.++|+||++||++... ..|.... .....+.+.||+|+
T Consensus 14 ~~~~~~~~s~~~g~~~~~~v~~P~~~~---~~~~p~vv~lHG~~~~~-----------~~~~~~~-~~~~~~~~~g~~vv 78 (278)
T 3e4d_A 14 MQGVFSHQSETLKSEMTFAVYVPPKAI---HEPCPVVWYLSGLTCTH-----------ANVMEKG-EYRRMASELGLVVV 78 (278)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGG---TSCEEEEEEECCTTCCS-----------HHHHHHS-CCHHHHHHHTCEEE
T ss_pred cEEEEEEeccccCCcceEEEEcCCCCC---CCCCCEEEEEcCCCCCc-----------cchhhcc-cHHHHHhhCCeEEE
Confidence 345566654 57889999999998764 23489999999976322 1121110 12334456799999
Q ss_pred eCCCCCCCCCCCCCCC-------------------------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHH
Q 011049 302 AGPSIPIIGEGDKLPN-------------------------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAF 356 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~-------------------------~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~ 356 (494)
.++.++ +|.+... ..+.....+ .+++++.+...+|++|++|+|||+||+
T Consensus 79 ~~d~~g---~G~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~d~~~i~l~G~S~GG~ 152 (278)
T 3e4d_A 79 CPDTSP---RGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTE---ELPALIGQHFRADMSRQSIFGHSMGGH 152 (278)
T ss_dssp ECCSSC---CSTTSCCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHHT---HHHHHHHHHSCEEEEEEEEEEETHHHH
T ss_pred ecCCcc---cCcccccccccccccCCccccccCCcCcccchhhHHHHHHH---HHHHHHHhhcCCCcCCeEEEEEChHHH
Confidence 977653 2221100 011222222 345666666557889999999999999
Q ss_pred HHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCC--CCEEEEecCCCCCCCCCHH
Q 011049 357 MTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIK--KPILIIHGEVDDKVGLFPM 434 (494)
Q Consensus 357 ~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~--~P~li~~G~~D~~v~~~~~ 434 (494)
+++.++.++|++|+++++++|+.+....++.........-.....+...+|...+.+++ +|+|++||++|..+| ..
T Consensus 153 ~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~ 230 (278)
T 3e4d_A 153 GAMTIALKNPERFKSCSAFAPIVAPSSADWSEPALEKYLGADRAAWRRYDACSLVEDGARFPEFLIDQGKADSFLE--KG 230 (278)
T ss_dssp HHHHHHHHCTTTCSCEEEESCCSCGGGCTTTHHHHHHHHCSCGGGGGGGCHHHHHHTTCCCSEEEEEEETTCTTHH--HH
T ss_pred HHHHHHHhCCcccceEEEeCCcccccCCccchhhHHHhcCCcHHHHHhcChhhHhhcCCCCCcEEEEecCCCcccc--cc
Confidence 99999999999999999999987643333221110000011223344556666666554 599999999999975 32
Q ss_pred H-HHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 435 Q-AERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 435 ~-~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
. ++++.++|++.++++++.++++++|.+. .....+.++++|+.++|+
T Consensus 231 ~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~~~~~l~~~~~~l~ 278 (278)
T 3e4d_A 231 LRPWLFEEAIKGTDIGLTLRMHDRYDHSYY---FISTFMDDHLKWHAERLG 278 (278)
T ss_dssp TCTHHHHHHHTTSSCEEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHcCCCceEEEeCCCCcCHH---HHHHHHHHHHHHHHHhcC
Confidence 2 6899999999999999999999999864 234667788999998874
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=196.28 Aligned_cols=238 Identities=18% Similarity=0.147 Sum_probs=165.6
Q ss_pred ccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEE
Q 011049 221 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 300 (494)
Q Consensus 221 ~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 300 (494)
.+..+.+++++.||..+.++++.|++ .+ .++.|+||++||++.. ...+. ......|+++||.|
T Consensus 65 ~~~~~~~~~~~~~g~~~~~~~~~p~~-~~--~~~~p~vv~~hG~~~~-----------~~~~~---~~~~~~l~~~G~~v 127 (367)
T 2hdw_A 65 KVEHRKVTFANRYGITLAADLYLPKN-RG--GDRLPAIVIGGPFGAV-----------KEQSS---GLYAQTMAERGFVT 127 (367)
T ss_dssp TEEEEEEEEECTTSCEEEEEEEEESS-CC--SSCEEEEEEECCTTCC-----------TTSHH---HHHHHHHHHTTCEE
T ss_pred CceeEEEEEecCCCCEEEEEEEeCCC-CC--CCCCCEEEEECCCCCc-----------chhhH---HHHHHHHHHCCCEE
Confidence 34678899999999999999999987 22 2348999999997521 11111 12456788999999
Q ss_pred EeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCC
Q 011049 301 LAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 380 (494)
Q Consensus 301 ~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~ 380 (494)
+.+++++...................|+.++++++.++..+|.+|++++|||+||.+++.++.++| .++++|+.+|...
T Consensus 128 ~~~d~~g~g~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~~ 206 (367)
T 2hdw_A 128 LAFDPSYTGESGGQPRNVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYDM 206 (367)
T ss_dssp EEECCTTSTTSCCSSSSCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCH
T ss_pred EEECCCCcCCCCCcCccccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEeccccc
Confidence 997776432121111112224567899999999999998888899999999999999999999997 5899999887521
Q ss_pred C-----CCCC--------------------------CC----cc---cc------------------------cccc--c
Q 011049 381 K-----TLTP--------------------------FG----FQ---TE------------------------FRTL--W 396 (494)
Q Consensus 381 ~-----~~~~--------------------------~~----~~---~~------------------------~~~~--~ 396 (494)
. .... .. .. .. .... .
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (367)
T 2hdw_A 207 TRVMSKGYNDSVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTM 286 (367)
T ss_dssp HHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBT
T ss_pred cHHHhhhhccccchHHHHHHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhh
Confidence 0 0000 00 00 00 0000 0
Q ss_pred ccHHHHHhcCccccccCCC-CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHH
Q 011049 397 EATNVYIEMSPITHANKIK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWET 475 (494)
Q Consensus 397 ~~~~~~~~~sp~~~~~~~~-~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 475 (494)
.....+...++...+.+++ +|+|+++|++|. + ..+++++++. .+.+++++++++++|.+........+.+.+
T Consensus 287 ~~~~~~~~~~~~~~~~~i~~~PvLii~G~~D~--~--~~~~~~~~~~---~~~~~~~~~~~g~gH~~~~~~~~~~~~~~i 359 (367)
T 2hdw_A 287 TTPLSFMNMPILTYIKEISPRPILLIHGERAH--S--RYFSETAYAA---AAEPKELLIVPGASHVDLYDRLDRIPFDRI 359 (367)
T ss_dssp TTHHHHTTSCSCTTGGGGTTSCEEEEEETTCT--T--HHHHHHHHHH---SCSSEEEEEETTCCTTHHHHCTTTSCHHHH
T ss_pred hhHHHhcCCChhHhHHhhcCCceEEEecCCCC--C--HHHHHHHHHh---CCCCeeEEEeCCCCeeeeecCchhHHHHHH
Confidence 1223444567777888999 999999999998 5 7888777766 577899999999999843211111267889
Q ss_pred HHHHHHhc
Q 011049 476 DRWLQKYC 483 (494)
Q Consensus 476 ~~fl~~~l 483 (494)
.+||+++|
T Consensus 360 ~~fl~~~l 367 (367)
T 2hdw_A 360 AGFFDEHL 367 (367)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhhC
Confidence 99999875
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.7e-22 Score=189.88 Aligned_cols=235 Identities=17% Similarity=0.108 Sum_probs=164.0
Q ss_pred cccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCe
Q 011049 220 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRF 298 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~ 298 (494)
.....+.+++++.+| .+.+++|.|++ .++.|+||++|||+|..+ +...| ......|+. .||
T Consensus 61 ~~~~~~~~~i~~~~~-~i~~~iy~P~~-----~~~~p~vv~~HGGg~~~g--------~~~~~----~~~~~~La~~~g~ 122 (323)
T 3ain_A 61 EVGKIEDITIPGSET-NIKARVYYPKT-----QGPYGVLVYYHGGGFVLG--------DIESY----DPLCRAITNSCQC 122 (323)
T ss_dssp CCSEEEEEEEECSSS-EEEEEEEECSS-----CSCCCEEEEECCSTTTSC--------CTTTT----HHHHHHHHHHHTS
T ss_pred CccEEEEEEecCCCC-eEEEEEEecCC-----CCCCcEEEEECCCccccC--------ChHHH----HHHHHHHHHhcCC
Confidence 345688899998887 89999999976 233799999999875432 22222 234456665 499
Q ss_pred EEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCC-C-CCCcEEEEecChHHHHHHHHHHhCCCce---eEEE
Q 011049 299 AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGV-A-DPSRIAVGGHSYGAFMTAHLLAHAPHLF---CCGI 373 (494)
Q Consensus 299 ~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~-d~~ri~i~G~S~GG~~a~~~~~~~p~~~---~a~v 373 (494)
.|+.+++++. ++... ....+|+.++++|+.++.. . |++||+|+|+|+||.+++.++.++|++. +++|
T Consensus 123 ~Vv~~Dyrg~---~~~~~-----p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~v 194 (323)
T 3ain_A 123 VTISVDYRLA---PENKF-----PAAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQV 194 (323)
T ss_dssp EEEEECCCCT---TTSCT-----THHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEE
T ss_pred EEEEecCCCC---CCCCC-----cchHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEE
Confidence 9999887653 33211 2346788899999988631 1 7899999999999999999999887766 8999
Q ss_pred eCCCCCCCCCCCCCcccc-ccccccc------HHHH---------HhcCcccc-ccCCCCCEEEEecCCCCCCCCCHHHH
Q 011049 374 ARSGSYNKTLTPFGFQTE-FRTLWEA------TNVY---------IEMSPITH-ANKIKKPILIIHGEVDDKVGLFPMQA 436 (494)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~---------~~~sp~~~-~~~~~~P~li~~G~~D~~v~~~~~~~ 436 (494)
+++|+.+.......+... ....+.. ...| ...+|+.. +..+ +|+||++|++|.. ..++
T Consensus 195 l~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~l-~P~lii~G~~D~l----~~~~ 269 (323)
T 3ain_A 195 LIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLRSFADLLDFRFSPILADLNDL-PPALIITAEHDPL----RDQG 269 (323)
T ss_dssp EESCCCSCCSCCHHHHHHSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGSCCTTC-CCEEEEEETTCTT----HHHH
T ss_pred EEeccccCCCCCccHHHhccCCCCCHHHHHHHHHHhCCCCcccCCcccCcccCcccCC-CHHHEEECCCCcc----HHHH
Confidence 999987643221110000 0000000 0001 12344433 2222 5999999999997 4678
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCccCCc----ccHHHHHHHHHHHHHHhcCC
Q 011049 437 ERFFDALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 437 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~fl~~~l~~ 485 (494)
..++++|++.++++++++|++.+|.+... +....+.+.+.+||++++..
T Consensus 270 ~~~a~~l~~ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 322 (323)
T 3ain_A 270 EAYANKLLQSGVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFYG 322 (323)
T ss_dssp HHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHHhcC
Confidence 89999999999999999999999997642 34567888999999998753
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.90 E-value=6.7e-23 Score=193.31 Aligned_cols=234 Identities=17% Similarity=0.161 Sum_probs=164.2
Q ss_pred ccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhC-CeE
Q 011049 221 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RFA 299 (494)
Q Consensus 221 ~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~~ 299 (494)
....+.+++++.+| ++.+++|.|++. .++.|+||++|||+|..+ +...| ......|+++ ||.
T Consensus 45 ~~~~~~~~i~~~~g-~l~~~~~~P~~~----~~~~p~vv~~HGGg~~~g--------~~~~~----~~~~~~la~~~g~~ 107 (310)
T 2hm7_A 45 VAEVREFDMDLPGR-TLKVRMYRPEGV----EPPYPALVYYHGGSWVVG--------DLETH----DPVCRVLAKDGRAV 107 (310)
T ss_dssp CSEEEEEEEEETTE-EEEEEEEECTTC----CSSEEEEEEECCSTTTSC--------CTTTT----HHHHHHHHHHHTSE
T ss_pred cceEEEEEeccCCC-eEEEEEEecCCC----CCCCCEEEEECCCccccC--------ChhHh----HHHHHHHHHhcCCE
Confidence 45678899998888 999999999863 234799999999875432 22222 2345567775 999
Q ss_pred EEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEecChHHHHHHHHHHhCCC----ceeEE
Q 011049 300 VLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPH----LFCCG 372 (494)
Q Consensus 300 v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~~~p~----~~~a~ 372 (494)
|+.+++++..++. .....+|+.++++|+.++. .+|+++|+|+|+|+||.+++.++.++|+ +++++
T Consensus 108 v~~~d~rg~~~~~--------~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~ 179 (310)
T 2hm7_A 108 VFSVDYRLAPEHK--------FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQ 179 (310)
T ss_dssp EEEECCCCTTTSC--------TTHHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCE
T ss_pred EEEeCCCCCCCCC--------CCccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEE
Confidence 9998886543221 1234678899999998874 3678899999999999999999998775 69999
Q ss_pred EeCCCCCCCC--CCCCCcccccccccccH-------HHH---------HhcCcccc--ccCCCCCEEEEecCCCCCCCCC
Q 011049 373 IARSGSYNKT--LTPFGFQTEFRTLWEAT-------NVY---------IEMSPITH--ANKIKKPILIIHGEVDDKVGLF 432 (494)
Q Consensus 373 v~~~~~~~~~--~~~~~~~~~~~~~~~~~-------~~~---------~~~sp~~~--~~~~~~P~li~~G~~D~~v~~~ 432 (494)
|+++|..+.. .....+........-.. ..| ...+|... +..+ +|+|+++|++|..
T Consensus 180 vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~-~P~lii~G~~D~~---- 254 (310)
T 2hm7_A 180 LLIYPSTGYDPAHPPASIEENAEGYLLTGGMMLWFRDQYLNSLEELTHPWFSPVLYPDLSGL-PPAYIATAQYDPL---- 254 (310)
T ss_dssp EEESCCCCCCTTSCCHHHHHTSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTC-CCEEEEEEEECTT----
T ss_pred EEEcCCcCCCcccCCcchhhcCCCCCCCHHHHHHHHHHhCCCCCccCCccCCCCcCccccCC-CCEEEEEecCCCc----
Confidence 9999987653 11100000000000000 001 02234332 2222 4999999999997
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEcCCCCCccCC----cccHHHHHHHHHHHHHHhcC
Q 011049 433 PMQAERFFDALKGHGALSRLVLLPFEHHVYAA----RENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 433 ~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~----~~~~~~~~~~~~~fl~~~l~ 484 (494)
..++..+++.|++.+.+++++++++++|.+.. .+....+.+.+.+||+++++
T Consensus 255 ~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 310 (310)
T 2hm7_A 255 RDVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDALA 310 (310)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHhC
Confidence 46788999999999999999999999998753 23446788899999998874
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.9e-22 Score=182.80 Aligned_cols=228 Identities=18% Similarity=0.169 Sum_probs=157.8
Q ss_pred EEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCC
Q 011049 227 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI 306 (494)
Q Consensus 227 ~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~ 306 (494)
+++. .||.++.++++.|++. .++.|+||++||.+.+. ....| ......|+++||.|+++|.+
T Consensus 4 ~~~~-~~g~~l~~~~~~p~~~----~~~~p~vvl~HG~~~~~---------~~~~~----~~~~~~l~~~g~~vi~~D~~ 65 (251)
T 2wtm_A 4 MYID-CDGIKLNAYLDMPKNN----PEKCPLCIIIHGFTGHS---------EERHI----VAVQETLNEIGVATLRADMY 65 (251)
T ss_dssp EEEE-ETTEEEEEEEECCTTC----CSSEEEEEEECCTTCCT---------TSHHH----HHHHHHHHHTTCEEEEECCT
T ss_pred eEEe-cCCcEEEEEEEccCCC----CCCCCEEEEEcCCCccc---------ccccH----HHHHHHHHHCCCEEEEecCC
Confidence 4555 5889999999998752 12378999999964210 00111 23455778899999996654
Q ss_pred CCCCCCCCCCCc--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC-
Q 011049 307 PIIGEGDKLPND--RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL- 383 (494)
Q Consensus 307 ~~~g~g~~~~~~--~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~- 383 (494)
|+|.+.... .......+|+.++++++.+...+ ++++++|||+||.+++.++.++|++++++|+.+|......
T Consensus 66 ---G~G~S~~~~~~~~~~~~~~d~~~~~~~l~~~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 140 (251)
T 2wtm_A 66 ---GHGKSDGKFEDHTLFKWLTNILAVVDYAKKLDFV--TDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEI 140 (251)
T ss_dssp ---TSTTSSSCGGGCCHHHHHHHHHHHHHHHTTCTTE--EEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHH
T ss_pred ---CCCCCCCccccCCHHHHHHHHHHHHHHHHcCccc--ceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHH
Confidence 555553321 12456688999999998765433 4899999999999999999999999999999988643100
Q ss_pred ------C-----CCCccccc--ccccc-c---HHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhC
Q 011049 384 ------T-----PFGFQTEF--RTLWE-A---TNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGH 446 (494)
Q Consensus 384 ------~-----~~~~~~~~--~~~~~-~---~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~ 446 (494)
. ........ ...+. . .......++...+.++++|+|++||++|..+| +..++++.+.+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~~~~~~-- 216 (251)
T 2wtm_A 141 ARTGELLGLKFDPENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVP--YEASVAFSKQYK-- 216 (251)
T ss_dssp HHHTEETTEECBTTBCCSEEEETTTEEEETHHHHHHTTCCHHHHHHHCCSCEEEEEETTCSSSC--HHHHHHHHHHSS--
T ss_pred HhhhhhccccCCchhcchHHhhhhccccchHHHHHHHccCHHHHHHhcCCCEEEEEeCCCCCcC--hHHHHHHHHhCC--
Confidence 0 00000000 00000 0 11112234445567789999999999999998 888888777652
Q ss_pred CCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 447 GALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 447 g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
+++++++++++|.+ .+....+.+.+.+||++++.+
T Consensus 217 --~~~~~~~~~~gH~~--~~~~~~~~~~i~~fl~~~~~~ 251 (251)
T 2wtm_A 217 --NCKLVTIPGDTHCY--DHHLELVTEAVKEFMLEQIAK 251 (251)
T ss_dssp --SEEEEEETTCCTTC--TTTHHHHHHHHHHHHHHHHCC
T ss_pred --CcEEEEECCCCccc--chhHHHHHHHHHHHHHHhccC
Confidence 57999999999998 577888999999999998764
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.5e-22 Score=176.68 Aligned_cols=203 Identities=17% Similarity=0.139 Sum_probs=147.7
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEe
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 302 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 302 (494)
..+.+++++.|| ++.++++.|++ ..+.|+||++||+++..+. ... .........|+++||.|+.
T Consensus 5 ~~~~~~~~~~~g-~l~~~~~~p~~-----~~~~~~vv~~HG~~~~~~~--------~~~--~~~~~~~~~l~~~g~~v~~ 68 (208)
T 3trd_A 5 TNEDFLIQGPVG-QLEVMITRPKG-----IEKSVTGIICHPHPLHGGT--------MNN--KVVTTLAKALDELGLKTVR 68 (208)
T ss_dssp SSSCEEEECSSS-EEEEEEECCSS-----CCCSEEEEEECSCGGGTCC--------TTC--HHHHHHHHHHHHTTCEEEE
T ss_pred ccceEEEECCCc-eEEEEEEcCCC-----CCCCCEEEEEcCCCCCCCc--------cCC--chHHHHHHHHHHCCCEEEE
Confidence 467788999999 99999999875 2247999999996422111 000 0012345578889999999
Q ss_pred CCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCC
Q 011049 303 GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT 382 (494)
Q Consensus 303 ~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~ 382 (494)
++.+ |+|.+...........+|+.++++++.++ .+.++++++|||+||.+++.++ .+| +++++|+.+|..+..
T Consensus 69 ~d~~---g~g~s~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~~ 141 (208)
T 3trd_A 69 FNFR---GVGKSQGRYDNGVGEVEDLKAVLRWVEHH--WSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFYE 141 (208)
T ss_dssp ECCT---TSTTCCSCCCTTTHHHHHHHHHHHHHHHH--CTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTSG
T ss_pred EecC---CCCCCCCCccchHHHHHHHHHHHHHHHHh--CCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEeccccccC
Confidence 7765 44444333222345678899999999887 3458999999999999999999 666 899999998865210
Q ss_pred CCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCcc
Q 011049 383 LTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVY 462 (494)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 462 (494)
....+..+++|+|+++|++|..+| +.+++++++.+... ++++++++++|.+
T Consensus 142 ------------------------~~~~~~~~~~p~l~i~g~~D~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~H~~ 192 (208)
T 3trd_A 142 ------------------------GFASLTQMASPWLIVQGDQDEVVP--FEQVKAFVNQISSP---VEFVVMSGASHFF 192 (208)
T ss_dssp ------------------------GGTTCCSCCSCEEEEEETTCSSSC--HHHHHHHHHHSSSC---CEEEEETTCCSSC
T ss_pred ------------------------CchhhhhcCCCEEEEECCCCCCCC--HHHHHHHHHHccCc---eEEEEeCCCCCcc
Confidence 112334558999999999999998 88888887776543 7999999999998
Q ss_pred CCcccHHHHHHHHHHHH
Q 011049 463 AARENVMHVIWETDRWL 479 (494)
Q Consensus 463 ~~~~~~~~~~~~~~~fl 479 (494)
... .....+.+.+||
T Consensus 193 ~~~--~~~~~~~i~~fl 207 (208)
T 3trd_A 193 HGR--LIELRELLVRNL 207 (208)
T ss_dssp TTC--HHHHHHHHHHHH
T ss_pred ccc--HHHHHHHHHHHh
Confidence 742 356666667776
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.90 E-value=3.3e-22 Score=189.64 Aligned_cols=238 Identities=18% Similarity=0.145 Sum_probs=164.7
Q ss_pred cccccEEEEEEcCCCc-eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CC
Q 011049 220 ASLQKEMIKYQRKDGV-PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RR 297 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~-~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G 297 (494)
..+..+.+++++.+|. ++.+++|.|++. .++.|+||++|||+|..+ +...+ ......|+. .|
T Consensus 47 ~~~~~~~~~i~~~~g~~~l~~~~~~P~~~----~~~~p~vv~~HGgg~~~g--------~~~~~----~~~~~~la~~~G 110 (323)
T 1lzl_A 47 DGVSLRELSAPGLDGDPEVKIRFVTPDNT----AGPVPVLLWIHGGGFAIG--------TAESS----DPFCVEVARELG 110 (323)
T ss_dssp TTEEEEEEEECCSTTCCCEEEEEEEESSC----CSCEEEEEEECCSTTTSC--------CGGGG----HHHHHHHHHHHC
T ss_pred CCceEEEEEecCCCCCceeEEEEEecCCC----CCCCcEEEEECCCccccC--------Chhhh----HHHHHHHHHhcC
Confidence 3456788999998997 899999999752 234799999999875332 21112 123456666 59
Q ss_pred eEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHhCCC----cee
Q 011049 298 FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHAPH----LFC 370 (494)
Q Consensus 298 ~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~~p~----~~~ 370 (494)
|.|+.+++++. |.... ....+|+.++++|+.+. ..+|++||+|+|+|+||++++.++.++++ .++
T Consensus 111 ~~Vv~~d~rg~---~~~~~-----~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~ 182 (323)
T 1lzl_A 111 FAVANVEYRLA---PETTF-----PGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVA 182 (323)
T ss_dssp CEEEEECCCCT---TTSCT-----THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCC
T ss_pred cEEEEecCCCC---CCCCC-----CchHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCee
Confidence 99999887653 33311 23467888888888774 23688899999999999999999988765 489
Q ss_pred EEEeCCCCCCCCCCCCCcccc-ccccccc------HHHHH--------------hcCccccccCCC--CCEEEEecCCCC
Q 011049 371 CGIARSGSYNKTLTPFGFQTE-FRTLWEA------TNVYI--------------EMSPITHANKIK--KPILIIHGEVDD 427 (494)
Q Consensus 371 a~v~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~--------------~~sp~~~~~~~~--~P~li~~G~~D~ 427 (494)
++|+++|+.+.......+... ....|.. ...|. ..+|+.. ..++ +|+|++||++|.
T Consensus 183 ~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~~~~~~~P~li~~G~~D~ 261 (323)
T 1lzl_A 183 FQFLEIPELDDRLETVSMTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRA-TDLTGLPPTYLSTMELDP 261 (323)
T ss_dssp EEEEESCCCCTTCCSHHHHHCSSCSSCCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGC-SCCTTCCCEEEEEETTCT
T ss_pred EEEEECCccCCCcCchhHHHhccCCCCCHHHHHHHHHHhCCCCcccccccCCCcccCcccC-cccCCCChhheEECCcCC
Confidence 999999987743221100000 0001100 01111 1233332 1222 799999999999
Q ss_pred CCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcc---cHHHHHHHHHHHHHHhcCCC
Q 011049 428 KVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE---NVMHVIWETDRWLQKYCLSN 486 (494)
Q Consensus 428 ~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~---~~~~~~~~~~~fl~~~l~~~ 486 (494)
. ..++..++++|++.|+++++++|++++|++.... ....+++.+.+||++++...
T Consensus 262 ~----~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 319 (323)
T 1lzl_A 262 L----RDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLRSL 319 (323)
T ss_dssp T----HHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTCC-
T ss_pred c----hHHHHHHHHHHHHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhccC
Confidence 7 4678899999999999999999999999875322 24578889999999998753
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=7.1e-22 Score=189.58 Aligned_cols=239 Identities=13% Similarity=0.089 Sum_probs=161.9
Q ss_pred cccccEEEEEEcCCCceEEEEEEeCCCCCC------------CCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCc
Q 011049 220 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQ------------SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTP 287 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~------------~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~ 287 (494)
..+..+.+.+.+ +..+.+.+|+|++... ...++.|+||++|||++..++. ... ...
T Consensus 68 ~~v~~~dv~~~~--~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~--------~~~--~~~ 135 (351)
T 2zsh_A 68 DGVFSFDVLIDR--RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSA--------NSA--IYD 135 (351)
T ss_dssp TTEEEEEEEEET--TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCT--------TBH--HHH
T ss_pred CCceEEEEEecC--CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCC--------cch--hHH
Confidence 345567777764 5578999999986420 0124589999999987643221 110 011
Q ss_pred hhHHHHH-hCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC----CCCCC-cEEEEecChHHHHHHHH
Q 011049 288 TSSLIFL-ARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG----VADPS-RIAVGGHSYGAFMTAHL 361 (494)
Q Consensus 288 ~~~~~l~-~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~----~~d~~-ri~i~G~S~GG~~a~~~ 361 (494)
.....|+ ++||.|+.+++++..... .....+|+.++++|+.++. .+|++ ||+|+|||+||.+++.+
T Consensus 136 ~~~~~la~~~g~~vv~~d~rg~~~~~--------~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~ 207 (351)
T 2zsh_A 136 TLCRRLVGLCKCVVVSVNYRRAPENP--------YPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNV 207 (351)
T ss_dssp HHHHHHHHHHTSEEEEECCCCTTTSC--------TTHHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEecCCCCCCCC--------CchhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHH
Confidence 2445677 789999998887643221 1245788999999998864 47889 99999999999999999
Q ss_pred HHhCCC---ceeEEEeCCCCCCCCCCCCCcccccccccccH-------HHH---------HhcCcc----ccccCCCC-C
Q 011049 362 LAHAPH---LFCCGIARSGSYNKTLTPFGFQTEFRTLWEAT-------NVY---------IEMSPI----THANKIKK-P 417 (494)
Q Consensus 362 ~~~~p~---~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---------~~~sp~----~~~~~~~~-P 417 (494)
+.++|+ +++++|+++|..+..............+.... ..+ ...+|+ ..+.++++ |
T Consensus 208 a~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~pP 287 (351)
T 2zsh_A 208 ALRAGESGIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPK 287 (351)
T ss_dssp HHHHHTTTCCCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTSCCCTTCCCCE
T ss_pred HHHhhccCCCeeEEEEECCccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCccchhhCCCCC
Confidence 999888 89999999998763221100000000000000 001 011222 23444555 9
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCC---cccHHHHHHHHHHHHHHh
Q 011049 418 ILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA---RENVMHVIWETDRWLQKY 482 (494)
Q Consensus 418 ~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~---~~~~~~~~~~~~~fl~~~ 482 (494)
+|+++|++|..+ .++..++++|++.+++++++++++++|.+.. .+....+++.+.+||+++
T Consensus 288 ~Lii~G~~D~~~----~~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~~ 351 (351)
T 2zsh_A 288 SLVVVAGLDLIR----DWQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNAE 351 (351)
T ss_dssp EEEEEETTSTTH----HHHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC-
T ss_pred EEEEEcCCCcch----HHHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 999999999974 4678899999999999999999999999864 245667888999999753
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=193.72 Aligned_cols=240 Identities=12% Similarity=0.053 Sum_probs=157.4
Q ss_pred ccccEEEEEEcCCCceEEEEEEeCCCC-CCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHH-hCCe
Q 011049 221 SLQKEMIKYQRKDGVPLTATLYLPPGY-DQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRF 298 (494)
Q Consensus 221 ~~~~~~~~~~~~dg~~~~~~l~~P~~~-~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~ 298 (494)
.+..+.+.+.+ +..+.+.+|+|++. .+ .++.|+||++|||++..++.... .| ......|+ ++||
T Consensus 52 ~v~~~~v~~~~--~~~~~~~~~~P~~~~~~--~~~~p~vv~~HGgg~~~~~~~~~------~~----~~~~~~la~~~g~ 117 (338)
T 2o7r_A 52 PVLTKDLALNP--LHNTFVRLFLPRHALYN--SAKLPLVVYFHGGGFILFSAAST------IF----HDFCCEMAVHAGV 117 (338)
T ss_dssp SEEEEEEEEET--TTTEEEEEEEEGGGGGS--SCCEEEEEEECCSTTTSCCTTBH------HH----HHHHHHHHHHHTC
T ss_pred CEEEEEEEecC--CCCeEEEEEeCCCCCcC--CCCceEEEEEcCCcCcCCCCCch------hH----HHHHHHHHHHCCc
Confidence 45678888875 55788899999763 22 23489999999987643221100 01 12345677 7899
Q ss_pred EEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC------CCCCCcEEEEecChHHHHHHHHHHhCCC-----
Q 011049 299 AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG------VADPSRIAVGGHSYGAFMTAHLLAHAPH----- 367 (494)
Q Consensus 299 ~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~------~~d~~ri~i~G~S~GG~~a~~~~~~~p~----- 367 (494)
.|+.+++++..... ....++|+.++++|+.++. .+|.+|++|+|||+||++++.++.++|+
T Consensus 118 ~vv~~d~rg~~~~~--------~~~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~ 189 (338)
T 2o7r_A 118 VIASVDYRLAPEHR--------LPAAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADEL 189 (338)
T ss_dssp EEEEEECCCTTTTC--------TTHHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHH
T ss_pred EEEEecCCCCCCCC--------CchHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccC
Confidence 99998887532211 1245788999999998763 2577899999999999999999999888
Q ss_pred ---ceeEEEeCCCCCCCCCCCCC--------c-ccc-ccccccc------HHHHHhcCccc---------cccCCCCCEE
Q 011049 368 ---LFCCGIARSGSYNKTLTPFG--------F-QTE-FRTLWEA------TNVYIEMSPIT---------HANKIKKPIL 419 (494)
Q Consensus 368 ---~~~a~v~~~~~~~~~~~~~~--------~-~~~-~~~~~~~------~~~~~~~sp~~---------~~~~~~~P~l 419 (494)
+++++|+.+|..+....... + ... ....|.. .......+|+. .+.++.+|+|
T Consensus 190 ~~~~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~L 269 (338)
T 2o7r_A 190 LPLKIKGLVLDEPGFGGSKRTGSELRLANDSRLPTFVLDLIWELSLPMGADRDHEYCNPTAESEPLYSFDKIRSLGWRVM 269 (338)
T ss_dssp TTCCEEEEEEESCCCCCSSCCHHHHHTTTCSSSCHHHHHHHHHHHSCTTCCTTSTTTCCC----CCTHHHHHHHHTCEEE
T ss_pred CCCceeEEEEECCccCCCcCChhhhccCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCcccccHhhhcCCCCCEE
Confidence 89999999998653211000 0 000 0000000 00000011221 1223456999
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCc--ccHHHHHHHHHHHHHHhcCCC
Q 011049 420 IIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR--ENVMHVIWETDRWLQKYCLSN 486 (494)
Q Consensus 420 i~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~--~~~~~~~~~~~~fl~~~l~~~ 486 (494)
+++|++|.++ .++.+++++|++.+.+++++++++++|.+... +....+++.+.+||.+++...
T Consensus 270 vi~G~~D~~~----~~~~~~~~~l~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~~~~ 334 (338)
T 2o7r_A 270 VVGCHGDPMI----DRQMELAERLEKKGVDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSCTTK 334 (338)
T ss_dssp EEEETTSTTH----HHHHHHHHHHHHTTCEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC------
T ss_pred EEECCCCcch----HHHHHHHHHHHHCCCcEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhhcccc
Confidence 9999999985 35678999999999999999999999987532 334678889999999887643
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-21 Score=180.51 Aligned_cols=221 Identities=17% Similarity=0.174 Sum_probs=151.9
Q ss_pred cccEEEEEEcC-CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCC---CchhHHHHHhC-
Q 011049 222 LQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGM---TPTSSLIFLAR- 296 (494)
Q Consensus 222 ~~~~~~~~~~~-dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~- 296 (494)
.+.+.+++.+. +|..+.+++|+|+++.+.+ ++|+||++||++... ..|... .......|+++
T Consensus 30 g~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~--~~P~vv~lHG~g~~~-----------~~~~~~~~~~~~~~~~l~~~g 96 (268)
T 1jjf_A 30 GQVVNISYFSTATNSTRPARVYLPPGYSKDK--KYSVLYLLHGIGGSE-----------NDWFEGGGRANVIADNLIAEG 96 (268)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECTTCCTTS--CBCEEEEECCTTCCT-----------TTTTTTTTCHHHHHHHHHHTT
T ss_pred ceEEEEEEeccccCCceEEEEEeCCCCCCCC--CccEEEEECCCCCCc-----------chhhhccccHHHHHHHHHHcC
Confidence 45677888765 6789999999999876533 499999999986321 112211 11124466665
Q ss_pred ---CeEEEeCCCCCCCCCCCCCCCchhHHHHHHH-HHHHHHHHHHcCCC--CCCcEEEEecChHHHHHHHHHHhCCCcee
Q 011049 297 ---RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSS-AEAAVEEVVRRGVA--DPSRIAVGGHSYGAFMTAHLLAHAPHLFC 370 (494)
Q Consensus 297 ---G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d-~~~~v~~l~~~~~~--d~~ri~i~G~S~GG~~a~~~~~~~p~~~~ 370 (494)
||+|+.+++++. +.+ ....+ ....++ +.++++++.++..+ |++||+|+|+|+||++++.++.++|++|+
T Consensus 97 ~~~~~~vv~~d~~~~-~~~---~~~~~-~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~ 171 (268)
T 1jjf_A 97 KIKPLIIVTPNTNAA-GPG---IADGY-ENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFA 171 (268)
T ss_dssp SSCCCEEEEECCCCC-CTT---CSCHH-HHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCS
T ss_pred CCCCEEEEEeCCCCC-Ccc---ccccH-HHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhh
Confidence 599999777643 111 11222 222233 44566777765444 88999999999999999999999999999
Q ss_pred EEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCC-EEEEecCCCCCCCCCHHHHHHHHHHHHhCCCc
Q 011049 371 CGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKP-ILIIHGEVDDKVGLFPMQAERFFDALKGHGAL 449 (494)
Q Consensus 371 a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P-~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~ 449 (494)
++++++|..+... + . ..+.... .....+.| +|++||++|..+| .++++++.|++.|++
T Consensus 172 ~~v~~s~~~~~~~--~--~----~~~~~~~---------~~~~~~~pp~li~~G~~D~~v~----~~~~~~~~l~~~g~~ 230 (268)
T 1jjf_A 172 YIGPISAAPNTYP--N--E----RLFPDGG---------KAAREKLKLLFIACGTNDSLIG----FGQRVHEYCVANNIN 230 (268)
T ss_dssp EEEEESCCTTSCC--H--H----HHCTTTT---------HHHHHHCSEEEEEEETTCTTHH----HHHHHHHHHHHTTCC
T ss_pred heEEeCCCCCCCc--h--h----hhcCcch---------hhhhhcCceEEEEecCCCCCcc----HHHHHHHHHHHCCCc
Confidence 9999999754311 0 0 0000000 00112344 9999999999864 377899999999999
Q ss_pred EEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 450 SRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 450 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
+++++|++++|.+. .....+..+++||.++..
T Consensus 231 ~~~~~~~g~~H~~~---~~~~~~~~~~~~l~~~~~ 262 (268)
T 1jjf_A 231 HVYWLIQGGGHDFN---VWKPGLWNFLQMADEAGL 262 (268)
T ss_dssp CEEEEETTCCSSHH---HHHHHHHHHHHHHHHHTT
T ss_pred eEEEEcCCCCcCHh---HHHHHHHHHHHHHHhcCc
Confidence 99999999999874 234567788999988743
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-22 Score=190.74 Aligned_cols=222 Identities=15% Similarity=0.117 Sum_probs=151.3
Q ss_pred CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEEeCCCCCCCCC
Q 011049 233 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGE 311 (494)
Q Consensus 233 dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~ 311 (494)
+|.++ ++|++. .. ..|+||++|||+|..++ ...+ ......|+. .||.|+.++++.....
T Consensus 66 ~g~~~----~~p~~~--~~--~~~~vv~~HGgg~~~g~--------~~~~----~~~~~~la~~~g~~v~~~dyr~~~~~ 125 (322)
T 3k6k_A 66 GGVPC----IRQATD--GA--GAAHILYFHGGGYISGS--------PSTH----LVLTTQLAKQSSATLWSLDYRLAPEN 125 (322)
T ss_dssp TTEEE----EEEECT--TC--CSCEEEEECCSTTTSCC--------HHHH----HHHHHHHHHHHTCEEEEECCCCTTTS
T ss_pred CCEeE----EecCCC--CC--CCeEEEEEcCCcccCCC--------hHHH----HHHHHHHHHhcCCEEEEeeCCCCCCC
Confidence 66555 566652 11 13559999998754322 1112 123345665 4999999888754322
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCc----eeEEEeCCCCCCCCCCCCC
Q 011049 312 GDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL----FCCGIARSGSYNKTLTPFG 387 (494)
Q Consensus 312 g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~----~~a~v~~~~~~~~~~~~~~ 387 (494)
. ....++|+.++++|+.+++ +|+++|+|+|+|+||.+++.++.+.++. ++++|+++|+.+.......
T Consensus 126 ~--------~~~~~~d~~~a~~~l~~~~-~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~ 196 (322)
T 3k6k_A 126 P--------FPAAVDDCVAAYRALLKTA-GSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSRWS 196 (322)
T ss_dssp C--------TTHHHHHHHHHHHHHHHHH-SSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCSHH
T ss_pred C--------CchHHHHHHHHHHHHHHcC-CCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCccc
Confidence 1 1245788999999999984 6899999999999999999999987765 8999999998875432211
Q ss_pred ccccc-ccccccH-------HHH--------HhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEE
Q 011049 388 FQTEF-RTLWEAT-------NVY--------IEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSR 451 (494)
Q Consensus 388 ~~~~~-~~~~~~~-------~~~--------~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~ 451 (494)
+.... ..++... ..| ...+|+....+..+|+||+||++|.. ..++.+++++|++.|++++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~G~~D~~----~~~~~~~~~~l~~~g~~~~ 272 (322)
T 3k6k_A 197 NSNLADRDFLAEPDTLGEMSELYVGGEDRKNPLISPVYADLSGLPEMLIHVGSEEAL----LSDSTTLAERAGAAGVSVE 272 (322)
T ss_dssp HHHTGGGCSSSCHHHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEESSCTT----HHHHHHHHHHHHHTTCCEE
T ss_pred hhhccCCCCcCCHHHHHHHHHHhcCCCCCCCCcCCcccccccCCCcEEEEECCcCcc----HHHHHHHHHHHHHCCCCEE
Confidence 11000 0001000 111 11355544334447999999999986 5788999999999999999
Q ss_pred EEEcCCCCCccCCc----ccHHHHHHHHHHHHHHhcCCCC
Q 011049 452 LVLLPFEHHVYAAR----ENVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 452 ~~~~~~~~H~~~~~----~~~~~~~~~~~~fl~~~l~~~~ 487 (494)
+++|++++|.+... +.....++.+.+||.+++....
T Consensus 273 l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~~ 312 (322)
T 3k6k_A 273 LKIWPDMPHVFQMYGKFVNAADISIKEICHWISARISKLA 312 (322)
T ss_dssp EEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTCC---
T ss_pred EEEECCCccccccccccChHHHHHHHHHHHHHHHHHhccc
Confidence 99999999997532 3356788999999999998654
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.89 E-value=6.4e-22 Score=176.58 Aligned_cols=212 Identities=13% Similarity=0.132 Sum_probs=156.5
Q ss_pred cccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 222 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 222 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
...+.+++++.+| ++.++++.|++..+ .+.|+||++||+++..+.. .. .........|+++||.|+
T Consensus 8 ~~~~~~~~~~~~g-~~~~~~~~p~~~~~---~~~~~vv~~HG~~~~~~~~--------~~--~~~~~~~~~l~~~g~~v~ 73 (220)
T 2fuk_A 8 TESAALTLDGPVG-PLDVAVDLPEPDVA---VQPVTAIVCHPLSTEGGSM--------HN--KVVTMAARALRELGITVV 73 (220)
T ss_dssp SSCEEEEEEETTE-EEEEEEECCCTTSC---CCSEEEEEECSCTTTTCST--------TC--HHHHHHHHHHHTTTCEEE
T ss_pred ccceEEEEeCCCC-eEEEEEEeCCCCCc---cccCEEEEECCCCCcCCcc--------cc--hHHHHHHHHHHHCCCeEE
Confidence 3568899999999 99999999976211 2279999999965321110 00 001234557788999999
Q ss_pred eCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCC
Q 011049 302 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 381 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~ 381 (494)
.++.+ |+|.+...........+|+.++++++.++. +.++++++|||+||.+++.++.++ +++++|+.+|....
T Consensus 74 ~~d~~---g~g~s~~~~~~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~ 146 (220)
T 2fuk_A 74 RFNFR---SVGTSAGSFDHGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGR 146 (220)
T ss_dssp EECCT---TSTTCCSCCCTTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTT
T ss_pred EEecC---CCCCCCCCcccCchhHHHHHHHHHHHHhcC--CCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccc
Confidence 97765 444443332333456889999999999874 567999999999999999999987 89999999987543
Q ss_pred CCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCc
Q 011049 382 TLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV 461 (494)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 461 (494)
.. ...+. ...|+|+++|++|..+| ...++++++.++ .+++++++++++|.
T Consensus 147 ~~------------------------~~~~~-~~~p~l~i~g~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~H~ 196 (220)
T 2fuk_A 147 WD------------------------FSDVQ-PPAQWLVIQGDADEIVD--PQAVYDWLETLE---QQPTLVRMPDTSHF 196 (220)
T ss_dssp BC------------------------CTTCC-CCSSEEEEEETTCSSSC--HHHHHHHHTTCS---SCCEEEEETTCCTT
T ss_pred hh------------------------hhhcc-cCCcEEEEECCCCcccC--HHHHHHHHHHhC---cCCcEEEeCCCCce
Confidence 11 00111 25799999999999998 888877777764 45789999999999
Q ss_pred cCCcccHHHHHHHHHHHHHHhcCCC
Q 011049 462 YAARENVMHVIWETDRWLQKYCLSN 486 (494)
Q Consensus 462 ~~~~~~~~~~~~~~~~fl~~~l~~~ 486 (494)
+.. ....+.+.+.+||.+++...
T Consensus 197 ~~~--~~~~~~~~i~~~l~~~l~~~ 219 (220)
T 2fuk_A 197 FHR--KLIDLRGALQHGVRRWLPAT 219 (220)
T ss_dssp CTT--CHHHHHHHHHHHHGGGCSSC
T ss_pred ehh--hHHHHHHHHHHHHHHHhhcC
Confidence 875 35578889999999998753
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.9e-23 Score=194.38 Aligned_cols=237 Identities=13% Similarity=0.138 Sum_probs=155.2
Q ss_pred cEEEEEEc-CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEe
Q 011049 224 KEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 302 (494)
Q Consensus 224 ~~~~~~~~-~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 302 (494)
.+.+++.+ .+|.++.+.+|+|+++. ..++|+||++||+++... .|.... .....++++||+|+.
T Consensus 22 ~~~~~~~s~~~~~~~~~~v~~P~~~~---~~~~p~vv~lHG~~~~~~-----------~~~~~~-~~~~~~~~~g~~vv~ 86 (283)
T 4b6g_A 22 QQVWAHHAQTLQCEMKFAVYLPNNPE---NRPLGVIYWLSGLTCTEQ-----------NFITKS-GFQRYAAEHQVIVVA 86 (283)
T ss_dssp EEEEEEEETTTTEEEEEEEEECCCTT---CCCEEEEEEECCTTCCSH-----------HHHHHS-CTHHHHHHHTCEEEE
T ss_pred EEEEEEechhhCCceEEEEEeCCCCC---CCCCCEEEEEcCCCCCcc-----------chhhcc-cHHHHHhhCCeEEEE
Confidence 44555554 46889999999999865 234899999999763221 121101 123456778999999
Q ss_pred CCCC--CCC---------CCCCCCC----------CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHH
Q 011049 303 GPSI--PII---------GEGDKLP----------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL 361 (494)
Q Consensus 303 ~~~~--~~~---------g~g~~~~----------~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~ 361 (494)
++.+ +.. |.|.++. ...+.....+++... +.+.. .+++|++|+|+|+||++|+.+
T Consensus 87 ~d~~~rg~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~-~~~~~~~l~G~S~GG~~a~~~ 162 (283)
T 4b6g_A 87 PDTSPRGEQVPNDDAYDLGQSAGFYLNATEQPWAANYQMYDYILNELPRL---IEKHF-PTNGKRSIMGHSMGGHGALVL 162 (283)
T ss_dssp ECSSCCSTTSCCCSSTTSBTTBCTTSBCCSTTGGGTCBHHHHHHTHHHHH---HHHHS-CEEEEEEEEEETHHHHHHHHH
T ss_pred eccccccccccccccccccCCCcccccCccCcccchhhHHHHHHHHHHHH---HHHhC-CCCCCeEEEEEChhHHHHHHH
Confidence 7742 211 2222110 011223333444444 33332 246899999999999999999
Q ss_pred HHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCC--CCEEEEecCCCCCCCCCHH-HHHH
Q 011049 362 LAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIK--KPILIIHGEVDDKVGLFPM-QAER 438 (494)
Q Consensus 362 ~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~--~P~li~~G~~D~~v~~~~~-~~~~ 438 (494)
+.++|++|+++++++|+.+....++.........-.....+...+|...+.+++ +|+|++||+.|..++ .. ++.+
T Consensus 163 a~~~p~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~~--~~~~~~~ 240 (283)
T 4b6g_A 163 ALRNQERYQSVSAFSPILSPSLVPWGEKAFTAYLGKDREKWQQYDANSLIQQGYKVQGMRIDQGLEDEFLP--TQLRTED 240 (283)
T ss_dssp HHHHGGGCSCEEEESCCCCGGGSHHHHHHHHHHHCSCGGGGGGGCHHHHHHHTCCCSCCEEEEETTCTTHH--HHTCHHH
T ss_pred HHhCCccceeEEEECCccccccCcchhhhHHhhcCCchHHHHhcCHHHHHHhcccCCCEEEEecCCCccCc--chhhHHH
Confidence 999999999999999987643211110000000001223344566666665554 599999999999875 42 2789
Q ss_pred HHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 439 FFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 439 ~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
++++|++.|+++++.++|+++|.+. .....+...++|+.++|+
T Consensus 241 ~~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~l~~~l~~~~~~l~ 283 (283)
T 4b6g_A 241 FIETCRAANQPVDVRFHKGYDHSYY---FIASFIGEHIAYHAAFLK 283 (283)
T ss_dssp HHHHHHHHTCCCEEEEETTCCSSHH---HHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCCceEEEeCCCCcCHh---HHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999864 344667788999998874
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-23 Score=196.95 Aligned_cols=209 Identities=14% Similarity=0.118 Sum_probs=150.3
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeC
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 303 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 303 (494)
...+.|. +..+...+|.|++. .++.|+||++|||+|..++. ..+ ......|+++||.|+.+
T Consensus 58 ~~~i~y~---~~~~~~~~~~p~~~----~~~~p~vv~~HGgg~~~~~~--------~~~----~~~~~~l~~~G~~v~~~ 118 (303)
T 4e15_A 58 VDHLRYG---EGRQLVDVFYSEKT----TNQAPLFVFVHGGYWQEMDM--------SMS----CSIVGPLVRRGYRVAVM 118 (303)
T ss_dssp EEEEECS---STTCEEEEEECTTC----CTTCCEEEEECCSTTTSCCG--------GGS----CTTHHHHHHTTCEEEEE
T ss_pred eeeeccC---CCCcEEEEEecCCC----CCCCCEEEEECCCcCcCCCh--------hHH----HHHHHHHHhCCCEEEEe
Confidence 3445554 45677888888742 23489999999987644221 112 23456788999999998
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc-CCCCCCcEEEEecChHHHHHHHHHHhCCC-------ceeEEEeC
Q 011049 304 PSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR-GVADPSRIAVGGHSYGAFMTAHLLAHAPH-------LFCCGIAR 375 (494)
Q Consensus 304 ~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~-~~~d~~ri~i~G~S~GG~~a~~~~~~~p~-------~~~a~v~~ 375 (494)
++++..+ . .......|+.++++|+.+. ...+++||+|+|||+||++++.++.+.+. +++++|++
T Consensus 119 d~r~~~~---~-----~~~~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~ 190 (303)
T 4e15_A 119 DYNLCPQ---V-----TLEQLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFL 190 (303)
T ss_dssp CCCCTTT---S-----CHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEE
T ss_pred cCCCCCC---C-----ChhHHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEE
Confidence 8765422 1 1345678999999999873 22467899999999999999999886542 79999999
Q ss_pred CCCCCCCCCCCCc-ccccccccccHHHHHhcCcc-ccccCC----CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCc
Q 011049 376 SGSYNKTLTPFGF-QTEFRTLWEATNVYIEMSPI-THANKI----KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGAL 449 (494)
Q Consensus 376 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~sp~-~~~~~~----~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~ 449 (494)
+|+++........ ...........+.+...+|+ ..+.++ ++|+|++||++|..|+ ..++.+++++|++.|.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~g~~ 268 (303)
T 4e15_A 191 CGVYDLRELSNLESVNPKNILGLNERNIESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTF--IEQSRHYADVLRKKGYK 268 (303)
T ss_dssp SCCCCCHHHHTCTTTSGGGTTCCCTTTTTTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHH--HHHHHHHHHHHHHHTCC
T ss_pred eeeeccHhhhcccccchhhhhcCCHHHHHHcCchhhcccccccCCCCCEEEEEeCCCCCCc--hHHHHHHHHHHHHCCCc
Confidence 9987742110000 00011112233445667787 566655 8999999999999988 99999999999999999
Q ss_pred EEEEEcCCCCCc
Q 011049 450 SRLVLLPFEHHV 461 (494)
Q Consensus 450 ~~~~~~~~~~H~ 461 (494)
++++++++++|.
T Consensus 269 ~~~~~~~g~~H~ 280 (303)
T 4e15_A 269 ASFTLFKGYDHF 280 (303)
T ss_dssp EEEEEEEEEETT
T ss_pred eEEEEeCCCCch
Confidence 999999999995
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-21 Score=185.54 Aligned_cols=235 Identities=15% Similarity=0.145 Sum_probs=164.0
Q ss_pred cccEEE-EEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEE
Q 011049 222 LQKEMI-KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 300 (494)
Q Consensus 222 ~~~~~~-~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 300 (494)
+..+.+ .+.+.||.++.+.++.|.+ .+.|+||++||.+... ..| ......|+++||.|
T Consensus 32 ~~~~~~~~~~~~dg~~l~~~~~~p~~------~~~p~vv~~HG~~~~~-----------~~~----~~~~~~l~~~g~~v 90 (342)
T 3hju_A 32 IPYQDLPHLVNADGQYLFCRYWKPTG------TPKALIFVSHGAGEHS-----------GRY----EELARMLMGLDLLV 90 (342)
T ss_dssp CBTTSSCEEECTTSCEEEEEEECCSS------CCSEEEEEECCTTCCG-----------GGG----HHHHHHHHTTTEEE
T ss_pred cccccCceEEccCCeEEEEEEeCCCC------CCCcEEEEECCCCccc-----------chH----HHHHHHHHhCCCeE
Confidence 344555 7888999999999998864 2369999999975221 112 23456778889999
Q ss_pred EeCCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCC
Q 011049 301 LAGPSIPIIGEGDKLP---NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 377 (494)
Q Consensus 301 ~~~~~~~~~g~g~~~~---~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 377 (494)
++++.++ +|.+.. ........++|+.++++++..+ .+.++++|+|||+||++++.++..+|++++++|+++|
T Consensus 91 i~~D~~G---~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~--~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 165 (342)
T 3hju_A 91 FAHDHVG---HGQSEGERMVVSDFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISP 165 (342)
T ss_dssp EEECCTT---STTSCSSTTCCSCTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESC
T ss_pred EEEcCCC---CcCCCCcCCCcCcHHHHHHHHHHHHHHHHHh--CCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECc
Confidence 9977654 444432 2223466789999999999887 3567899999999999999999999999999999998
Q ss_pred CCCCCCCCCCcc-----------------ccccccc--ccH---HHHH---------------------hcCccccccCC
Q 011049 378 SYNKTLTPFGFQ-----------------TEFRTLW--EAT---NVYI---------------------EMSPITHANKI 414 (494)
Q Consensus 378 ~~~~~~~~~~~~-----------------~~~~~~~--~~~---~~~~---------------------~~sp~~~~~~~ 414 (494)
............ ......+ ... ..+. ..+....+.++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 245 (342)
T 3hju_A 166 LVLANPESATTFKVLAAKVLNLVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKL 245 (342)
T ss_dssp CCSCCTTTTSHHHHHHHHHHHHHCTTCBCCCCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGC
T ss_pred ccccchhhhhHHHHHHHHHHHHhccccccCcccccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhC
Confidence 765321110000 0000000 000 0000 00112346778
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcc--cHHHHHHHHHHHHHHhcCCC
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE--NVMHVIWETDRWLQKYCLSN 486 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~--~~~~~~~~~~~fl~~~l~~~ 486 (494)
++|+|+++|++|..+| ...+.++++.+.. ..++++++++++|.+.... .....+..+++||.+++...
T Consensus 246 ~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 315 (342)
T 3hju_A 246 TVPFLLLQGSADRLCD--SKGAYLLMELAKS--QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTATA 315 (342)
T ss_dssp CSCEEEEEETTCSSSC--HHHHHHHHHHCCC--SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CcCEEEEEeCCCcccC--hHHHHHHHHHcCC--CCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhcccCCC
Confidence 9999999999999998 8888888887753 3579999999999976432 24467788999999998653
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.5e-22 Score=185.45 Aligned_cols=202 Identities=17% Similarity=0.175 Sum_probs=141.1
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC--chhHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAV 332 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~v 332 (494)
.+.||++||.+ ++...| ...+..|+++||.|+++|.+ |+|.+... .....+.++|+.+++
T Consensus 51 ~~~VlllHG~~-----------~s~~~~----~~la~~La~~Gy~Via~Dl~---GhG~S~~~~~~~~~~~~~~d~~~~~ 112 (281)
T 4fbl_A 51 RIGVLVSHGFT-----------GSPQSM----RFLAEGFARAGYTVATPRLT---GHGTTPAEMAASTASDWTADIVAAM 112 (281)
T ss_dssp SEEEEEECCTT-----------CCGGGG----HHHHHHHHHTTCEEEECCCT---TSSSCHHHHHTCCHHHHHHHHHHHH
T ss_pred CceEEEECCCC-----------CCHHHH----HHHHHHHHHCCCEEEEECCC---CCCCCCccccCCCHHHHHHHHHHHH
Confidence 56789999943 222223 24566889999999996654 66666321 222456688999999
Q ss_pred HHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC-----------CCCc-------ccc---
Q 011049 333 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT-----------PFGF-------QTE--- 391 (494)
Q Consensus 333 ~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~-----------~~~~-------~~~--- 391 (494)
++|.+.. ++++|+|||+||.+++.++.++|++++++|+++|....... .... ..+
T Consensus 113 ~~l~~~~----~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (281)
T 4fbl_A 113 RWLEERC----DVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVK 188 (281)
T ss_dssp HHHHHHC----SEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCC
T ss_pred HHHHhCC----CeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHH
Confidence 9987653 68999999999999999999999999999999887542110 0000 000
Q ss_pred -c---ccccccHHHHHh--cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCc
Q 011049 392 -F---RTLWEATNVYIE--MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR 465 (494)
Q Consensus 392 -~---~~~~~~~~~~~~--~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~ 465 (494)
. ..++.....+.. ......+.++++|+|+++|++|..+| +.+++.+++.+.. .+++++++++++|.+...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~v~--~~~~~~l~~~l~~--~~~~l~~~~~~gH~~~~e 264 (281)
T 4fbl_A 189 ELAYPVTPVPAIKHLITIGAVAEMLLPRVKCPALIIQSREDHVVP--PHNGELIYNGIGS--TEKELLWLENSYHVATLD 264 (281)
T ss_dssp CCCCSEEEGGGHHHHHHHHHHHHHHGGGCCSCEEEEEESSCSSSC--THHHHHHHHHCCC--SSEEEEEESSCCSCGGGS
T ss_pred HhhhccCchHHHHHHHHhhhhccccccccCCCEEEEEeCCCCCcC--HHHHHHHHHhCCC--CCcEEEEECCCCCcCccc
Confidence 0 000111111110 01123467889999999999999998 8988888887753 457999999999987655
Q ss_pred ccHHHHHHHHHHHHHHh
Q 011049 466 ENVMHVIWETDRWLQKY 482 (494)
Q Consensus 466 ~~~~~~~~~~~~fl~~~ 482 (494)
...+.+.+.+.+||++|
T Consensus 265 ~~~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 265 NDKELILERSLAFIRKH 281 (281)
T ss_dssp TTHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhC
Confidence 56778899999999986
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.3e-22 Score=183.65 Aligned_cols=242 Identities=12% Similarity=-0.019 Sum_probs=159.9
Q ss_pred cccEEEEEEcC-CCceEEEEEEeCCCCCC--CCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHH-HhCC
Q 011049 222 LQKEMIKYQRK-DGVPLTATLYLPPGYDQ--SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF-LARR 297 (494)
Q Consensus 222 ~~~~~~~~~~~-dg~~~~~~l~~P~~~~~--~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~G 297 (494)
+..+.+++.+. .|.++.+++|+|++++. ..+.++|+||++||++.. ...|... .....+ ...|
T Consensus 5 m~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~-----------~~~~~~~--~~~~~~~~~~~ 71 (263)
T 2uz0_A 5 PAVMKIEYYSQVLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGN-----------HNSWLKR--TNVERLLRGTN 71 (263)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECC---------CCBCEEEEECCTTCC-----------TTHHHHH--SCHHHHTTTCC
T ss_pred ceEeEEEEechhhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCC-----------HHHHHhc--cCHHHHHhcCC
Confidence 45677778754 67899999999998621 112348999999997522 1112110 012233 4479
Q ss_pred eEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCC
Q 011049 298 FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 377 (494)
Q Consensus 298 ~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 377 (494)
|+|+.+++++. ++........+.....+|+...++.+..+..+|+++++|+|||+||++++.++. +|++|+++|+++|
T Consensus 72 ~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~ 149 (263)
T 2uz0_A 72 LIVVMPNTSNG-WYTDTQYGFDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSG 149 (263)
T ss_dssp CEEEECCCTTS-TTSBCTTSCBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESC
T ss_pred eEEEEECCCCC-ccccCCCcccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecC
Confidence 99998666433 222211223344556677777776654433468899999999999999999999 8999999999999
Q ss_pred CCCCCCCCCCcccccc-----cccc--cHHHHHhcCccccccCCC--CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCC
Q 011049 378 SYNKTLTPFGFQTEFR-----TLWE--ATNVYIEMSPITHANKIK--KPILIIHGEVDDKVGLFPMQAERFFDALKGHGA 448 (494)
Q Consensus 378 ~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~sp~~~~~~~~--~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~ 448 (494)
..+............. ..+. ....+...+|...+.+++ +|+|++||++|..+ .+++++++.|++.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v----~~~~~~~~~l~~~g~ 225 (263)
T 2uz0_A 150 ALSFQNFSPESQNLGSPAYWRGVFGEIRDWTTSPYSLESLAKKSDKKTKLWAWCGEQDFLY----EANNLAVKNLKKLGF 225 (263)
T ss_dssp CCCSSSCCGGGTTCSCHHHHHHHHCCCSCTTTSTTSHHHHGGGCCSCSEEEEEEETTSTTH----HHHHHHHHHHHHTTC
T ss_pred CcchhhccccccccccchhHHHHcCChhhhccccCCHHHHHHhccCCCeEEEEeCCCchhh----HHHHHHHHHHHHCCC
Confidence 8764331110000000 0000 011233456666666665 79999999999975 457899999999999
Q ss_pred cEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCCC
Q 011049 449 LSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSN 486 (494)
Q Consensus 449 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~ 486 (494)
+++++++++ +|.+. .....+..+++||.++++..
T Consensus 226 ~~~~~~~~g-~H~~~---~~~~~~~~~~~~l~~~l~~~ 259 (263)
T 2uz0_A 226 DVTYSHSAG-THEWY---YWEKQLEVFLTTLPIDFKLE 259 (263)
T ss_dssp EEEEEEESC-CSSHH---HHHHHHHHHHHHSSSCCCCC
T ss_pred CeEEEECCC-CcCHH---HHHHHHHHHHHHHHhhccch
Confidence 999999999 99863 23467788999999988754
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.89 E-value=4e-22 Score=188.05 Aligned_cols=233 Identities=18% Similarity=0.151 Sum_probs=160.2
Q ss_pred cccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhC-CeEE
Q 011049 222 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RFAV 300 (494)
Q Consensus 222 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~~v 300 (494)
...+.+++++.+| .+.+++|.|.+. .+.|+||++||++|.. ++...| ......|+.+ ||.|
T Consensus 46 ~~~~~~~i~~~~g-~i~~~~~~p~~~-----~~~p~vv~~HGgg~~~--------g~~~~~----~~~~~~la~~~g~~v 107 (311)
T 2c7b_A 46 AETRDVHIPVSGG-SIRARVYFPKKA-----AGLPAVLYYHGGGFVF--------GSIETH----DHICRRLSRLSDSVV 107 (311)
T ss_dssp SEEEEEEEEETTE-EEEEEEEESSSC-----SSEEEEEEECCSTTTS--------CCTGGG----HHHHHHHHHHHTCEE
T ss_pred ceEEEEEecCCCC-cEEEEEEecCCC-----CCCcEEEEECCCcccC--------CChhhh----HHHHHHHHHhcCCEE
Confidence 4678899998888 999999999751 2379999999987532 222222 1344566765 9999
Q ss_pred EeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEecChHHHHHHHHHHhCCC----ceeEEE
Q 011049 301 LAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPH----LFCCGI 373 (494)
Q Consensus 301 ~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~~~p~----~~~a~v 373 (494)
+.+++++ .|.... ....+|+.++++|+.+.. .+|+++|+|+|+|+||++++.++.++|+ +++++|
T Consensus 108 ~~~d~rg---~g~~~~-----~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v 179 (311)
T 2c7b_A 108 VSVDYRL---APEYKF-----PTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQV 179 (311)
T ss_dssp EEECCCC---TTTSCT-----THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEE
T ss_pred EEecCCC---CCCCCC-----CccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEE
Confidence 9988764 333311 234678888888887752 3678899999999999999999988765 599999
Q ss_pred eCCCCCCCCCCCC----Cccccccccccc------HHHH---------HhcCcccc-ccCCCCCEEEEecCCCCCCCCCH
Q 011049 374 ARSGSYNKTLTPF----GFQTEFRTLWEA------TNVY---------IEMSPITH-ANKIKKPILIIHGEVDDKVGLFP 433 (494)
Q Consensus 374 ~~~~~~~~~~~~~----~~~~~~~~~~~~------~~~~---------~~~sp~~~-~~~~~~P~li~~G~~D~~v~~~~ 433 (494)
+.+|+.+...... .+.......+.. .+.| ...+|+.. +..+ +|+|+++|++|..+
T Consensus 180 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~-~P~lii~G~~D~~~---- 254 (311)
T 2c7b_A 180 LIYPVVNMTGVPTASLVEFGVAETTSLPIELMVWFGRQYLKRPEEAYDFKASPLLADLGGL-PPALVVTAEYDPLR---- 254 (311)
T ss_dssp EESCCCCCSSCCCHHHHHHHHCTTCSSCHHHHHHHHHHHCSSTTGGGSTTTCGGGSCCTTC-CCEEEEEETTCTTH----
T ss_pred EECCccCCccccccCCccHHHhccCCCCHHHHHHHHHHhCCCCccccCcccCcccccccCC-CcceEEEcCCCCch----
Confidence 9999876311000 000000000000 0001 11234332 2233 49999999999985
Q ss_pred HHHHHHHHHHHhCCCcEEEEEcCCCCCccCC----cccHHHHHHHHHHHHHHhcCC
Q 011049 434 MQAERFFDALKGHGALSRLVLLPFEHHVYAA----RENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 434 ~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~----~~~~~~~~~~~~~fl~~~l~~ 485 (494)
.++..+++.|+..+.+++++++++++|.+.. .+....+.+.+.+||++++.+
T Consensus 255 ~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 310 (311)
T 2c7b_A 255 DEGELYAYKMKASGSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGLQP 310 (311)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHhcC
Confidence 4567888999999999999999999999753 234467888999999999864
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=179.28 Aligned_cols=183 Identities=14% Similarity=0.109 Sum_probs=127.5
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCC-----CchhHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP-----NDRFVEQLVSSAE 329 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~-----~~~~~~~~~~d~~ 329 (494)
.|+||++||.|. +...|.. ....|...|+.|++++..+..+++.... .....+.....+.
T Consensus 22 ~~~Vv~lHG~G~-----------~~~~~~~----l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i~ 86 (210)
T 4h0c_A 22 KKAVVMLHGRGG-----------TAADIIS----LQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALVG 86 (210)
T ss_dssp SEEEEEECCTTC-----------CHHHHHG----GGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHHH
T ss_pred CcEEEEEeCCCC-----------CHHHHHH----HHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHHH
Confidence 689999999541 1111221 2234456899999977655433332211 1122333444555
Q ss_pred HHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccc
Q 011049 330 AAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPIT 409 (494)
Q Consensus 330 ~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~ 409 (494)
.+++.+.+.+ +|++||+++|+|+||++++.++.++|++|+++|+++|........ ... .
T Consensus 87 ~~~~~~~~~~-i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~---~~~-----------------~ 145 (210)
T 4h0c_A 87 EVVAEIEAQG-IPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELA---IGN-----------------Y 145 (210)
T ss_dssp HHHHHHHHTT-CCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCC---GGG-----------------C
T ss_pred HHHHHHHHhC-CChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhh---hhh-----------------h
Confidence 5566665554 799999999999999999999999999999999998853211000 000 0
Q ss_pred cccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 410 HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 410 ~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
.....++|+|++||++|++|| +.+++++++.|++.|.++++++||+.+|.+.. +.++.+.+||.
T Consensus 146 ~~~~~~~Pvl~~hG~~D~~vp--~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~~-----~el~~i~~wL~ 209 (210)
T 4h0c_A 146 KGDFKQTPVFISTGNPDPHVP--VSRVQESVTILEDMNAAVSQVVYPGRPHTISG-----DEIQLVNNTIL 209 (210)
T ss_dssp CBCCTTCEEEEEEEESCTTSC--HHHHHHHHHHHHHTTCEEEEEEEETCCSSCCH-----HHHHHHHHTTT
T ss_pred hhhccCCceEEEecCCCCccC--HHHHHHHHHHHHHCCCCeEEEEECCCCCCcCH-----HHHHHHHHHHc
Confidence 011235899999999999998 99999999999999999999999999998762 33556667764
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.7e-21 Score=175.47 Aligned_cols=225 Identities=13% Similarity=0.136 Sum_probs=153.0
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeC
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 303 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 303 (494)
.+..++.+.||.++.+.++.|.+ +++.|+||++||+++..++ ...| .......|++. |.|+.+
T Consensus 3 ~~~~~~~~~dg~~l~~~~~~p~~-----~~~~~~vv~~HG~~~~~~~--------~~~~---~~~~~~~l~~~-~~v~~~ 65 (275)
T 3h04_A 3 EIKYKVITKDAFALPYTIIKAKN-----QPTKGVIVYIHGGGLMFGK--------ANDL---SPQYIDILTEH-YDLIQL 65 (275)
T ss_dssp CEEEEEECTTSCEEEEEEECCSS-----SSCSEEEEEECCSTTTSCC--------TTCS---CHHHHHHHTTT-EEEEEE
T ss_pred ceEEEEecCCcEEEEEEEEccCC-----CCCCCEEEEEECCcccCCc--------hhhh---HHHHHHHHHhC-ceEEee
Confidence 45677888999999999999874 2347999999998753321 1111 22344455555 999997
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC
Q 011049 304 PSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL 383 (494)
Q Consensus 304 ~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~ 383 (494)
+.++ .+.. ......+|+.++++++.++ ++.++++|+|||+||.+++.++.+ ++++++|+.+|..+...
T Consensus 66 d~~~---~~~~-----~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~ 133 (275)
T 3h04_A 66 SYRL---LPEV-----SLDCIIEDVYASFDAIQSQ--YSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINT 133 (275)
T ss_dssp CCCC---TTTS-----CHHHHHHHHHHHHHHHHHT--TTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCS
T ss_pred cccc---CCcc-----ccchhHHHHHHHHHHHHhh--CCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccc
Confidence 7763 3322 2345678999999999887 567899999999999999999998 78999999999876421
Q ss_pred CCCC------------cc----------cc-c-ccccccHHH-------------HHhc-------C-ccccccCCCCCE
Q 011049 384 TPFG------------FQ----------TE-F-RTLWEATNV-------------YIEM-------S-PITHANKIKKPI 418 (494)
Q Consensus 384 ~~~~------------~~----------~~-~-~~~~~~~~~-------------~~~~-------s-p~~~~~~~~~P~ 418 (494)
.... .. .. . ......... +... . ....+.+++ |+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~ 212 (275)
T 3h04_A 134 EPFKTTNSYYAKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PV 212 (275)
T ss_dssp HHHHSCCHHHHHHHTTSCHHHHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CE
T ss_pred cccccccchhhcccccchHHHHhcccCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CE
Confidence 1000 00 00 0 000000000 0000 0 011135666 99
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccH--HHHHHHHHHHHHHhcC
Q 011049 419 LIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENV--MHVIWETDRWLQKYCL 484 (494)
Q Consensus 419 li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~--~~~~~~~~~fl~~~l~ 484 (494)
|+++|++|..+| +.++.++++.+ .+.+++++++++|.+...... ..+.+.+.+||++++.
T Consensus 213 lii~G~~D~~~~--~~~~~~~~~~~----~~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 213 FIAHCNGDYDVP--VEESEHIMNHV----PHSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITM 274 (275)
T ss_dssp EEEEETTCSSSC--THHHHHHHTTC----SSEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEecCCCCCCC--hHHHHHHHHhc----CCceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHhc
Confidence 999999999998 88877766644 346899999999998754443 6888999999999874
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-21 Score=188.92 Aligned_cols=237 Identities=13% Similarity=0.009 Sum_probs=162.2
Q ss_pred cccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 222 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 222 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
+..+.+++++.+|..+.+.+|.|.+.. .++|+||++|||+|..++.... .+ ......|+++||+|+
T Consensus 80 ~~~~~~~~~~~~g~~l~~~v~~p~~~~----~~~p~vv~iHGgg~~~g~~~~~------~~----~~~~~~la~~g~~vv 145 (361)
T 1jkm_A 80 VETSTETILGVDGNEITLHVFRPAGVE----GVLPGLVYTHGGGMTILTTDNR------VH----RRWCTDLAAAGSVVV 145 (361)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTCC----SCEEEEEEECCSTTTSSCSSSH------HH----HHHHHHHHHTTCEEE
T ss_pred ceeeeeeeecCCCCeEEEEEEeCCCCC----CCCeEEEEEcCCccccCCCccc------ch----hHHHHHHHhCCCEEE
Confidence 456778888889889999999998631 1489999999987543221100 11 123557788999999
Q ss_pred eCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEecChHHHHHHHHHHh-----CCCceeEEE
Q 011049 302 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAH-----APHLFCCGI 373 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~~-----~p~~~~a~v 373 (494)
.+++++..|+... ........|+.++++|+.++. .+| +|+|+|+|+||.+++.++.. .|++++++|
T Consensus 146 ~~d~r~~gg~~~~----~~~~~~~~D~~~~~~~v~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~i 219 (361)
T 1jkm_A 146 MVDFRNAWTAEGH----HPFPSGVEDCLAAVLWVDEHRESLGLS--GVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVY 219 (361)
T ss_dssp EEECCCSEETTEE----CCTTHHHHHHHHHHHHHHHTHHHHTEE--EEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEE
T ss_pred EEecCCCCCCCCC----CCCCccHHHHHHHHHHHHhhHHhcCCC--eEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEE
Confidence 9888765332111 112345688889999998762 244 99999999999999999998 888999999
Q ss_pred eCCCCCCCCCCC---------CCccccccccccc--H----HHH---------HhcCcc----ccccCCCCCEEEEecCC
Q 011049 374 ARSGSYNKTLTP---------FGFQTEFRTLWEA--T----NVY---------IEMSPI----THANKIKKPILIIHGEV 425 (494)
Q Consensus 374 ~~~~~~~~~~~~---------~~~~~~~~~~~~~--~----~~~---------~~~sp~----~~~~~~~~P~li~~G~~ 425 (494)
+++|+.+..... ..+.......+.. . ..| ...+|+ ..+.++. |+|++||++
T Consensus 220 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~l~-P~Lii~G~~ 298 (361)
T 1jkm_A 220 ASIPYISGGYAWDHERRLTELPSLVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLP-PFVVAVNEL 298 (361)
T ss_dssp EESCCCCCCTTSCHHHHHHHCTHHHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCC-CEEEEEETT
T ss_pred EECCccccccccccccccccCcchhhccCcccCHHHHHHHHHHhCCCCCCCCCcccCccccChhhHcCCC-ceEEEEcCc
Confidence 999987651100 0000000000000 0 001 012343 2244555 999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccC-C----cccH-HHHHHHHHHHHHHhc
Q 011049 426 DDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA-A----RENV-MHVIWETDRWLQKYC 483 (494)
Q Consensus 426 D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~-~----~~~~-~~~~~~~~~fl~~~l 483 (494)
|..+ .++.++++.|++.+++++++++++++|.+. . .+.. ..+.+.+.+||+++.
T Consensus 299 D~~~----~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 299 DPLR----DEGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp CTTH----HHHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred Ccch----hhHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 9985 378899999999999999999999999876 2 1333 677889999998864
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.2e-21 Score=177.64 Aligned_cols=228 Identities=17% Similarity=0.129 Sum_probs=159.3
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEe
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 302 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 302 (494)
..+.+.++ .+|.++.++++.|.+ .+.|+||++||.+... ...........|+++||.|+.
T Consensus 21 ~~~~~~~~-~~g~~l~~~~~~p~~------~~~p~vv~~HG~~~~~-------------~~~~~~~~~~~l~~~G~~v~~ 80 (270)
T 3pfb_A 21 GMATITLE-RDGLQLVGTREEPFG------EIYDMAIIFHGFTANR-------------NTSLLREIANSLRDENIASVR 80 (270)
T ss_dssp EEEEEEEE-ETTEEEEEEEEECSS------SSEEEEEEECCTTCCT-------------TCHHHHHHHHHHHHTTCEEEE
T ss_pred cceEEEec-cCCEEEEEEEEcCCC------CCCCEEEEEcCCCCCc-------------cccHHHHHHHHHHhCCcEEEE
Confidence 34555555 689999999999874 1279999999975210 111112345578889999999
Q ss_pred CCCCCCCCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCC
Q 011049 303 GPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 380 (494)
Q Consensus 303 ~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~ 380 (494)
++.+ |+|.+... .......++|+.++++++.++.. .++++++|||+||++++.++.++|++++++|+.+|...
T Consensus 81 ~d~~---G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~ 155 (270)
T 3pfb_A 81 FDFN---GHGDSDGKFENMTVLNEIEDANAILNYVKTDPH--VRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAAT 155 (270)
T ss_dssp ECCT---TSTTSSSCGGGCCHHHHHHHHHHHHHHHHTCTT--EEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTH
T ss_pred Eccc---cccCCCCCCCccCHHHHHHhHHHHHHHHHhCcC--CCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccc
Confidence 7765 45544322 22345678999999999987643 35899999999999999999999999999999998754
Q ss_pred CCC------------CCCCccccc-cccc----ccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHH
Q 011049 381 KTL------------TPFGFQTEF-RTLW----EATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDAL 443 (494)
Q Consensus 381 ~~~------------~~~~~~~~~-~~~~----~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l 443 (494)
... ......... .... .....+...++...+.++++|+|+++|++|..+| ...+..+.+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~ 233 (270)
T 3pfb_A 156 LKGDALEGNTQGVTYNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVS--PNASKKYDQIY 233 (270)
T ss_dssp HHHHHHHTEETTEECCTTSCCSEEEETTEEEEHHHHHHHHHCCHHHHHTTCCSCEEEEEETTCSSSC--THHHHHHHHHC
T ss_pred cchhhhhhhhhccccCcccccccccccccccchhHhhcccccCHHHHHhhCCccEEEEEcCCCCCCC--HHHHHHHHHhC
Confidence 110 000000000 0000 1113344456666788899999999999999998 88877777764
Q ss_pred HhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 444 KGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 444 ~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
.+++++++++++|.+. .+....+.+.+.+||+++
T Consensus 234 ----~~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 234 ----QNSTLHLIEGADHCFS-DSYQKNAVNLTTDFLQNN 267 (270)
T ss_dssp ----SSEEEEEETTCCTTCC-THHHHHHHHHHHHHHC--
T ss_pred ----CCCeEEEcCCCCcccC-ccchHHHHHHHHHHHhhc
Confidence 3479999999999876 456678888888988765
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-20 Score=175.46 Aligned_cols=230 Identities=16% Similarity=0.165 Sum_probs=158.2
Q ss_pred EEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC
Q 011049 228 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 307 (494)
Q Consensus 228 ~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~ 307 (494)
.+.+.||.++.++++.|.+ .+.|+||++||.+.. ...| ......|+++||.|++++.+
T Consensus 21 ~~~~~~g~~l~~~~~~~~~------~~~~~vv~~hG~~~~-----------~~~~----~~~~~~l~~~g~~v~~~d~~- 78 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTG------TPKALIFVSHGAGEH-----------SGRY----EELARMLMGLDLLVFAHDHV- 78 (303)
T ss_dssp EEECTTSCEEEEEEECCSS------CCSEEEEEECCTTCC-----------GGGG----HHHHHHHHHTTEEEEEECCT-
T ss_pred eEecCCCeEEEEEEeccCC------CCCeEEEEECCCCch-----------hhHH----HHHHHHHHhCCCcEEEeCCC-
Confidence 6788899999999998874 226999999997521 1112 23456788899999996665
Q ss_pred CCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC-
Q 011049 308 IIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL- 383 (494)
Q Consensus 308 ~~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~- 383 (494)
|+|.+... .......++|+.++++++..+. +.+++.++|||+||.+++.++.++|++++++|+++|......
T Consensus 79 --G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 154 (303)
T 3pe6_A 79 --GHGQSEGERMVVSDFHVFVRDVLQHVDSMQKDY--PGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPE 154 (303)
T ss_dssp --TSTTSCSSTTCCSSTHHHHHHHHHHHHHHHHHS--TTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHH
T ss_pred --CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhhcc--CCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchh
Confidence 45544321 1234567889999999998773 357899999999999999999999999999999998754210
Q ss_pred ----------------CCCCccccccccc--ccH---HHHHh---------------------cCccccccCCCCCEEEE
Q 011049 384 ----------------TPFGFQTEFRTLW--EAT---NVYIE---------------------MSPITHANKIKKPILII 421 (494)
Q Consensus 384 ----------------~~~~~~~~~~~~~--~~~---~~~~~---------------------~sp~~~~~~~~~P~li~ 421 (494)
............+ ... ..+.. ......+.++++|+|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i 234 (303)
T 3pe6_A 155 SATTFKVLAAKVLNSVLPNLSSGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLL 234 (303)
T ss_dssp HHHHHHHHHHHHHHTTCCSCCCCCCCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEE
T ss_pred ccHHHHHHHHHHHHHhcccccCCccchhhhhcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEE
Confidence 0000000000000 000 00000 01123467789999999
Q ss_pred ecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcc--cHHHHHHHHHHHHHHhcCCCC
Q 011049 422 HGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE--NVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 422 ~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~--~~~~~~~~~~~fl~~~l~~~~ 487 (494)
+|++|..++ ...++.+.+.+.. ..++++++++++|.+.... .....+..+++||++++....
T Consensus 235 ~g~~D~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~~~~~ 298 (303)
T 3pe6_A 235 QGSADRLCD--SKGAYLLMELAKS--QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTATAG 298 (303)
T ss_dssp EETTCSSBC--HHHHHHHHHHCCC--SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTTC---
T ss_pred eeCCCCCCC--hHHHHHHHHhccc--CCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccCCCCC
Confidence 999999998 8888888887753 3579999999999876422 244677889999999987543
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.87 E-value=4.5e-21 Score=176.12 Aligned_cols=206 Identities=15% Similarity=0.167 Sum_probs=154.6
Q ss_pred cccEEEEEEcC--CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeE
Q 011049 222 LQKEMIKYQRK--DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 299 (494)
Q Consensus 222 ~~~~~~~~~~~--dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~ 299 (494)
...+.+++++. +|.. .+.+++|.... +++.|+||++||.+.. ...| ......|+++||.
T Consensus 23 ~~~~~~~~~~~~~~~~~-~~~l~~p~~~~---~~~~p~vv~~HG~~~~-----------~~~~----~~~~~~l~~~G~~ 83 (262)
T 1jfr_A 23 YATSQTSVSSLVASGFG-GGTIYYPTSTA---DGTFGAVVISPGFTAY-----------QSSI----AWLGPRLASQGFV 83 (262)
T ss_dssp SCEEEEEECTTTCSSSC-CEEEEEESCCT---TCCEEEEEEECCTTCC-----------GGGT----TTHHHHHHTTTCE
T ss_pred CCccceEecceeccCCC-ceeEEecCCCC---CCCCCEEEEeCCcCCC-----------chhH----HHHHHHHHhCCCE
Confidence 34566667655 4433 57788887521 2347999999997521 1112 2355678899999
Q ss_pred EEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH----cCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeC
Q 011049 300 VLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVR----RGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIAR 375 (494)
Q Consensus 300 v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~----~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~ 375 (494)
|+.++.+ |.|.. ......|+..+++++.+ ...++.++++++|||+||++++.++.++|+ ++++|++
T Consensus 84 v~~~d~~---g~g~~------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~ 153 (262)
T 1jfr_A 84 VFTIDTN---TTLDQ------PDSRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPL 153 (262)
T ss_dssp EEEECCS---STTCC------HHHHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEE
T ss_pred EEEeCCC---CCCCC------CchhHHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEee
Confidence 9997765 44432 12345678889999988 344677899999999999999999999987 8999998
Q ss_pred CCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHH-HHHHHHHHHhCCCcEEEEE
Q 011049 376 SGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQ-AERFFDALKGHGALSRLVL 454 (494)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~~~~l~~~g~~~~~~~ 454 (494)
+|... ...+.++++|+|+++|++|..++ ... ++++++.+. .+.++++++
T Consensus 154 ~p~~~---------------------------~~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~~~l~-~~~~~~~~~ 203 (262)
T 1jfr_A 154 TGWNT---------------------------DKTWPELRTPTLVVGADGDTVAP--VATHSKPFYESLP-GSLDKAYLE 203 (262)
T ss_dssp SCCCS---------------------------CCCCTTCCSCEEEEEETTCSSSC--TTTTHHHHHHHSC-TTSCEEEEE
T ss_pred cccCc---------------------------cccccccCCCEEEEecCccccCC--chhhHHHHHHHhh-cCCCceEEE
Confidence 87532 22345678999999999999998 887 999999984 356789999
Q ss_pred cCCCCCccCCcccHHHHHHHHHHHHHHhcCCCC
Q 011049 455 LPFEHHVYAARENVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 455 ~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~ 487 (494)
+++++|.+.. +....+.+.+.+||++++++.+
T Consensus 204 ~~~~~H~~~~-~~~~~~~~~i~~fl~~~l~~~~ 235 (262)
T 1jfr_A 204 LRGASHFTPN-TSDTTIAKYSISWLKRFIDSDT 235 (262)
T ss_dssp ETTCCTTGGG-SCCHHHHHHHHHHHHHHHSCCG
T ss_pred eCCCCcCCcc-cchHHHHHHHHHHHHHHhcCch
Confidence 9999999764 3446888999999999998653
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.3e-21 Score=178.69 Aligned_cols=205 Identities=14% Similarity=0.047 Sum_probs=142.1
Q ss_pred CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh--CCeEEEeCCCC---C
Q 011049 233 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA--RRFAVLAGPSI---P 307 (494)
Q Consensus 233 dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~~---~ 307 (494)
.+.+...+...|.. ++ .+.|+||++||.|. +...|.. ....|+. .++.++.++.. .
T Consensus 48 ~~~~~l~y~~~p~~--~~--~~~plVI~LHG~G~-----------~~~~~~~----~~~~l~~~~~~~~~v~P~Ap~~~~ 108 (285)
T 4fhz_A 48 IMTRKLTFGRRGAA--PG--EATSLVVFLHGYGA-----------DGADLLG----LAEPLAPHLPGTAFVAPDAPEPCR 108 (285)
T ss_dssp CCCCCCCEEEEESC--TT--CCSEEEEEECCTTB-----------CHHHHHT----THHHHGGGSTTEEEEEECCSEECT
T ss_pred cccccceeecCCCC--CC--CCCcEEEEEcCCCC-----------CHHHHHH----HHHHHHHhCCCeEEEecCCCcccc
Confidence 34444444555553 22 34899999999641 1112221 2334554 37888875421 1
Q ss_pred CCCCCCCCCCch------------hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeC
Q 011049 308 IIGEGDKLPNDR------------FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIAR 375 (494)
Q Consensus 308 ~~g~g~~~~~~~------------~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~ 375 (494)
..+.|..+.... .......++.+.++.+.++..+|++||+|+|+|+||++++.++.++|++|+++|++
T Consensus 109 ~~~~G~~Wfd~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~ 188 (285)
T 4fhz_A 109 ANGFGFQWFPIPWLDGSSETAAAEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGF 188 (285)
T ss_dssp TSSSCEESSCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEE
T ss_pred cCCCcccccccccccCcccchhhHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEe
Confidence 223333322110 11233556777778877776799999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEc
Q 011049 376 SGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLL 455 (494)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~ 455 (494)
+|.... ++.+. ...+.++|+|++||++|++|| +.+++++++.|++.|.++++++|
T Consensus 189 sG~l~~-----------------~~~~~------~~~~~~~Pvl~~hG~~D~~Vp--~~~~~~~~~~L~~~g~~~~~~~y 243 (285)
T 4fhz_A 189 SGRLLA-----------------PERLA------EEARSKPPVLLVHGDADPVVP--FADMSLAGEALAEAGFTTYGHVM 243 (285)
T ss_dssp SCCCSC-----------------HHHHH------HHCCCCCCEEEEEETTCSSSC--THHHHHHHHHHHHTTCCEEEEEE
T ss_pred ecCccC-----------------chhhh------hhhhhcCcccceeeCCCCCcC--HHHHHHHHHHHHHCCCCEEEEEE
Confidence 884210 11111 112346899999999999998 99999999999999999999999
Q ss_pred CCCCCccCCcccHHHHHHHHHHHHHHhcCCC
Q 011049 456 PFEHHVYAARENVMHVIWETDRWLQKYCLSN 486 (494)
Q Consensus 456 ~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~ 486 (494)
++.+|++.. +.++.+.+||+++|...
T Consensus 244 ~g~gH~i~~-----~~l~~~~~fL~~~Lpd~ 269 (285)
T 4fhz_A 244 KGTGHGIAP-----DGLSVALAFLKERLPDA 269 (285)
T ss_dssp TTCCSSCCH-----HHHHHHHHHHHHHCC--
T ss_pred CCCCCCCCH-----HHHHHHHHHHHHHCcCC
Confidence 999998752 45778999999999643
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.9e-20 Score=168.82 Aligned_cols=216 Identities=17% Similarity=0.120 Sum_probs=155.1
Q ss_pred EEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC
Q 011049 228 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 307 (494)
Q Consensus 228 ~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~ 307 (494)
.+...+| +..+++.|.+ +.|+||++||.+... ..|. .....|+++||.|+.++.++
T Consensus 6 ~~~~~~g--~~~~~~~~~~-------~~~~vv~~hG~~~~~-----------~~~~----~~~~~l~~~G~~v~~~d~~g 61 (238)
T 1ufo_A 6 ERLTLAG--LSVLARIPEA-------PKALLLALHGLQGSK-----------EHIL----ALLPGYAERGFLLLAFDAPR 61 (238)
T ss_dssp EEEEETT--EEEEEEEESS-------CCEEEEEECCTTCCH-----------HHHH----HTSTTTGGGTEEEEECCCTT
T ss_pred cccccCC--EEEEEEecCC-------CccEEEEECCCcccc-----------hHHH----HHHHHHHhCCCEEEEecCCC
Confidence 3444566 5556777764 269999999975211 1122 12235677899999977654
Q ss_pred CCCCCCCCCC---ch----------hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEe
Q 011049 308 IIGEGDKLPN---DR----------FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIA 374 (494)
Q Consensus 308 ~~g~g~~~~~---~~----------~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~ 374 (494)
+|.+... .. ......+|+.++++++.+.+. ++++++|||+||.+++.++.++|+++++++.
T Consensus 62 ---~g~s~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~ 135 (238)
T 1ufo_A 62 ---HGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFG---LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAF 135 (238)
T ss_dssp ---STTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCEEEEEETHHHHHHHHHHHTTCCCSCEEEE
T ss_pred ---CccCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEEEChHHHHHHHHHHhccCcceEEEE
Confidence 4433221 11 245668899999999987764 7899999999999999999999999999888
Q ss_pred CCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCC-CCCEEEEecCCCCCCCCCHHHHHHHHHHHH-hCCC-cEE
Q 011049 375 RSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKI-KKPILIIHGEVDDKVGLFPMQAERFFDALK-GHGA-LSR 451 (494)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~-~~P~li~~G~~D~~v~~~~~~~~~~~~~l~-~~g~-~~~ 451 (494)
.++..........+ ..+ .....+...++...+.++ ++|+|+++|++|..+| ...+.++++.+. +.+. +++
T Consensus 136 ~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~ 208 (238)
T 1ufo_A 136 IGSGFPMKLPQGQV----VED-PGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVP--LARMEKTLEALRPHYPEGRLA 208 (238)
T ss_dssp SCCSSCCCCCTTCC----CCC-HHHHHHHHSCGGGCGGGGTTCCEEEEEETTCTTTT--HHHHHHHHHHHGGGCTTCCEE
T ss_pred ecCCccchhhhhhc----cCC-cccchhhcCChhhhhhhccCCcEEEEECCCCCccC--cHHHHHHHHHHhhcCCCCceE
Confidence 87654322111110 000 113445566777778888 8999999999999998 999999999999 8877 899
Q ss_pred EEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 452 LVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 452 ~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
++++++++|.+.. +..+.+.+||.++++.
T Consensus 209 ~~~~~~~~H~~~~-----~~~~~~~~~l~~~l~~ 237 (238)
T 1ufo_A 209 RFVEEGAGHTLTP-----LMARVGLAFLEHWLEA 237 (238)
T ss_dssp EEEETTCCSSCCH-----HHHHHHHHHHHHHHHC
T ss_pred EEEeCCCCcccHH-----HHHHHHHHHHHHHHhc
Confidence 9999999998752 4567788999988753
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.7e-21 Score=201.62 Aligned_cols=191 Identities=20% Similarity=0.213 Sum_probs=136.8
Q ss_pred HHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc---------------CCCCCCcEEEEecChH
Q 011049 290 SLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR---------------GVADPSRIAVGGHSYG 354 (494)
Q Consensus 290 ~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~---------------~~~d~~ri~i~G~S~G 354 (494)
...|+++||+|+.+|.||..+.+... ..+.....+|+.++++||..+ . .+..||+++|+|||
T Consensus 274 ~~~la~~GYaVv~~D~RG~G~S~G~~--~~~~~~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~-~~~grVgl~G~SyG 350 (763)
T 1lns_A 274 NDYFLTRGFASIYVAGVGTRSSDGFQ--TSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKAS-WANGKVAMTGKSYL 350 (763)
T ss_dssp HHHHHTTTCEEEEECCTTSTTSCSCC--CTTSHHHHHHHHHHHHHHTTSSCEESSTTCCCEECCT-TEEEEEEEEEETHH
T ss_pred HHHHHHCCCEEEEECCCcCCCCCCcC--CCCCHHHHHHHHHHHHHHhhccccccccccccccccc-CCCCcEEEEEECHH
Confidence 46889999999997777643332221 122235689999999999843 2 24579999999999
Q ss_pred HHHHHHHHHhCCCceeEEEeCCCCCCCCC---------CCCCcccc---------cccccc-------------------
Q 011049 355 AFMTAHLLAHAPHLFCCGIARSGSYNKTL---------TPFGFQTE---------FRTLWE------------------- 397 (494)
Q Consensus 355 G~~a~~~~~~~p~~~~a~v~~~~~~~~~~---------~~~~~~~~---------~~~~~~------------------- 397 (494)
|++++.+|+.+|+.++|+|+.+|+.++.. ...++... ....+.
T Consensus 351 G~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 430 (763)
T 1lns_A 351 GTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLAEMT 430 (763)
T ss_dssp HHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGGSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhhhcCcchhhhHHHHHHHHHHHHH
Confidence 99999999999999999999998864210 00001000 000000
Q ss_pred ---------cHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccH
Q 011049 398 ---------ATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENV 468 (494)
Q Consensus 398 ---------~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~ 468 (494)
..+.|...++..++++|++|+|++||..|.+|| +.++.+++++|++ +.+.++++ ++++|........
T Consensus 431 ~~~~~~~~~~~~~w~~~s~~~~l~~I~~PvLii~G~~D~~vp--~~~a~~l~~al~~-~~~~~l~i-~~~gH~~~~~~~~ 506 (763)
T 1lns_A 431 AALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVT--PEQAYNFWKALPE-GHAKHAFL-HRGAHIYMNSWQS 506 (763)
T ss_dssp HHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSC--THHHHHHHHHSCT-TCCEEEEE-ESCSSCCCTTBSS
T ss_pred hhhhhccCchhHHhhccChhhHhhcCCCCEEEEEECCCCCCC--hHHHHHHHHhhcc-CCCeEEEE-eCCcccCccccch
Confidence 012334567788899999999999999999998 8999999999987 76676655 5668986432233
Q ss_pred HHHHHHHHHHHHHhcCCCC
Q 011049 469 MHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 469 ~~~~~~~~~fl~~~l~~~~ 487 (494)
..+.+.+.+||++||++..
T Consensus 507 ~~~~~~i~~Ffd~~Lkg~~ 525 (763)
T 1lns_A 507 IDFSETINAYFVAKLLDRD 525 (763)
T ss_dssp CCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHhcCCC
Confidence 4568899999999998753
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=4.8e-21 Score=175.89 Aligned_cols=202 Identities=16% Similarity=0.137 Sum_probs=149.9
Q ss_pred EEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCC
Q 011049 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 304 (494)
Q Consensus 225 ~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 304 (494)
+...++-.+|..+.+.+|.|++ .+.|+||++|||+|..++ ...|. .....|+++||.|+.++
T Consensus 39 ~~~~i~~~~~~~~~~~~~~p~~------~~~p~vv~~HGgg~~~~~--------~~~~~----~~~~~l~~~G~~v~~~d 100 (262)
T 2pbl_A 39 ARLNLSYGEGDRHKFDLFLPEG------TPVGLFVFVHGGYWMAFD--------KSSWS----HLAVGALSKGWAVAMPS 100 (262)
T ss_dssp EEEEEESSSSTTCEEEEECCSS------SCSEEEEEECCSTTTSCC--------GGGCG----GGGHHHHHTTEEEEEEC
T ss_pred CccccccCCCCCceEEEEccCC------CCCCEEEEEcCcccccCC--------hHHHH----HHHHHHHhCCCEEEEeC
Confidence 3445554577778888998875 227999999998753221 11222 34557788999999987
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC------CCceeEEEeCCCC
Q 011049 305 SIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA------PHLFCCGIARSGS 378 (494)
Q Consensus 305 ~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~------p~~~~a~v~~~~~ 378 (494)
+++. +. .......+|+.++++++..+.. ++++++|||+||++++.++.++ |++++++|+++|+
T Consensus 101 ~~~~---~~-----~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~ 169 (262)
T 2pbl_A 101 YELC---PE-----VRISEITQQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPL 169 (262)
T ss_dssp CCCT---TT-----SCHHHHHHHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCC
T ss_pred CCCC---CC-----CChHHHHHHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCc
Confidence 7543 22 1245678999999999988753 7899999999999999999887 8899999999998
Q ss_pred CCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCC
Q 011049 379 YNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFE 458 (494)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 458 (494)
.+.......+. ........+.+...+|...+.++++|+|+++|++|..++ ..++..+++.+. +++++++++
T Consensus 170 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~~-----~~~~~~~~~ 240 (262)
T 2pbl_A 170 SDLRPLLRTSM--NEKFKMDADAAIAESPVEMQNRYDAKVTVWVGGAERPAF--LDQAIWLVEAWD-----ADHVIAFEK 240 (262)
T ss_dssp CCCGGGGGSTT--HHHHCCCHHHHHHTCGGGCCCCCSCEEEEEEETTSCHHH--HHHHHHHHHHHT-----CEEEEETTC
T ss_pred cCchHHHhhhh--hhhhCCCHHHHHhcCcccccCCCCCCEEEEEeCCCCccc--HHHHHHHHHHhC-----CeEEEeCCC
Confidence 76321110000 011112345566778888888999999999999999987 899999999886 689999999
Q ss_pred CCccCC
Q 011049 459 HHVYAA 464 (494)
Q Consensus 459 ~H~~~~ 464 (494)
+|.+..
T Consensus 241 ~H~~~~ 246 (262)
T 2pbl_A 241 HHFNVI 246 (262)
T ss_dssp CTTTTT
T ss_pred CcchHH
Confidence 998653
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-20 Score=167.19 Aligned_cols=186 Identities=19% Similarity=0.158 Sum_probs=138.3
Q ss_pred CCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh--CCeEEEeCCCC----------------CCCCCCCCC
Q 011049 254 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA--RRFAVLAGPSI----------------PIIGEGDKL 315 (494)
Q Consensus 254 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~~----------------~~~g~g~~~ 315 (494)
+.|+||++||.+. +...| ......|++ +||.|++++.. +..|+|.+.
T Consensus 13 ~~~~vv~~HG~~~-----------~~~~~----~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~ 77 (218)
T 1auo_A 13 ADACVIWLHGLGA-----------DRYDF----MPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPAR 77 (218)
T ss_dssp CSEEEEEECCTTC-----------CTTTT----HHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSC
T ss_pred CCcEEEEEecCCC-----------ChhhH----HHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCccc
Confidence 4799999999752 11122 234557777 99999997643 223444322
Q ss_pred C-CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHH-hCCCceeEEEeCCCCCCCCCCCCCcccccc
Q 011049 316 P-NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA-HAPHLFCCGIARSGSYNKTLTPFGFQTEFR 393 (494)
Q Consensus 316 ~-~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~ 393 (494)
. ......+..+++..+++++.+.+ +|+++++++|||+||++++.++. ++|++++++|+++|...... +..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~----~~~--- 149 (218)
T 1auo_A 78 SISLEELEVSAKMVTDLIEAQKRTG-IDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFG----DEL--- 149 (218)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHTT-CCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCC----TTC---
T ss_pred ccchHHHHHHHHHHHHHHHHHHHcC-CCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCch----hhh---
Confidence 1 12234556778888888887744 78889999999999999999999 99999999999999755300 000
Q ss_pred cccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHH
Q 011049 394 TLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIW 473 (494)
Q Consensus 394 ~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~ 473 (494)
.....++++|+|+++|++|..+| +..++++++.+++.+.++++++++ ++|.+.. +..+
T Consensus 150 --------------~~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~-----~~~~ 207 (218)
T 1auo_A 150 --------------ELSASQQRIPALCLHGQYDDVVQ--NAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLP-----QEIH 207 (218)
T ss_dssp --------------CCCHHHHTCCEEEEEETTCSSSC--HHHHHHHHHHHHTTTCCEEEEEES-CSSSCCH-----HHHH
T ss_pred --------------hhhhcccCCCEEEEEeCCCceec--HHHHHHHHHHHHhCCCceEEEEec-CCCccCH-----HHHH
Confidence 00123457899999999999998 999999999999999899999999 9998752 4567
Q ss_pred HHHHHHHHhcC
Q 011049 474 ETDRWLQKYCL 484 (494)
Q Consensus 474 ~~~~fl~~~l~ 484 (494)
.+.+||.++++
T Consensus 208 ~~~~~l~~~l~ 218 (218)
T 1auo_A 208 DIGAWLAARLG 218 (218)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 88999998864
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.87 E-value=1e-20 Score=170.04 Aligned_cols=199 Identities=13% Similarity=0.080 Sum_probs=144.0
Q ss_pred EEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCC--------------
Q 011049 241 LYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI-------------- 306 (494)
Q Consensus 241 l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~-------------- 306 (494)
++.|+. +.+.|+||++||.+... ..| ......|+++||.|+.++.+
T Consensus 14 ~~~p~~-----~~~~~~vv~lHG~~~~~-----------~~~----~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~ 73 (232)
T 1fj2_A 14 AIVPAA-----RKATAAVIFLHGLGDTG-----------HGW----AEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPS 73 (232)
T ss_dssp EEECCS-----SCCSEEEEEECCSSSCH-----------HHH----HHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEEC
T ss_pred cccCCC-----CCCCceEEEEecCCCcc-----------chH----HHHHHHHhcCCcEEEecCCCcccccccccccccc
Confidence 566764 23479999999975211 112 12233445579999996432
Q ss_pred --CCCCCCCCC-CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC
Q 011049 307 --PIIGEGDKL-PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL 383 (494)
Q Consensus 307 --~~~g~g~~~-~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~ 383 (494)
+..|+.... ..........+|+.++++++.+ ..+|+++++++|||+||++++.++.++|++++++|+++|......
T Consensus 74 w~d~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~ 152 (232)
T 1fj2_A 74 WFDIIGLSPDSQEDESGIKQAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRA 152 (232)
T ss_dssp SSCBCCCSTTCCBCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGG
T ss_pred ccccccCCcccccccHHHHHHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCc
Confidence 223331111 1223355667888888888887 447889999999999999999999999999999999999754211
Q ss_pred CCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCc--EEEEEcCCCCCc
Q 011049 384 TPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGAL--SRLVLLPFEHHV 461 (494)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~--~~~~~~~~~~H~ 461 (494)
.. ......+.++++|+|+++|++|..+| ...++++++.+++.+.+ ++++++++++|.
T Consensus 153 ~~-------------------~~~~~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~ 211 (232)
T 1fj2_A 153 SF-------------------PQGPIGGANRDISILQCHGDCDPLVP--LMFGSLTVEKLKTLVNPANVTFKTYEGMMHS 211 (232)
T ss_dssp GS-------------------CSSCCCSTTTTCCEEEEEETTCSSSC--HHHHHHHHHHHHHHSCGGGEEEEEETTCCSS
T ss_pred cc-------------------cccccccccCCCCEEEEecCCCccCC--HHHHHHHHHHHHHhCCCCceEEEEeCCCCcc
Confidence 00 00112345678999999999999998 99999999999988855 999999999998
Q ss_pred cCCcccHHHHHHHHHHHHHHhcCCC
Q 011049 462 YAARENVMHVIWETDRWLQKYCLSN 486 (494)
Q Consensus 462 ~~~~~~~~~~~~~~~~fl~~~l~~~ 486 (494)
+. .+..+.+.+||.++++..
T Consensus 212 ~~-----~~~~~~i~~~l~~~l~~~ 231 (232)
T 1fj2_A 212 SC-----QQEMMDVKQFIDKLLPPI 231 (232)
T ss_dssp CC-----HHHHHHHHHHHHHHSCCC
T ss_pred cC-----HHHHHHHHHHHHHhcCCC
Confidence 73 244588999999998753
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.2e-21 Score=182.34 Aligned_cols=194 Identities=19% Similarity=0.193 Sum_probs=150.0
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
.+|.. .+.+++|.+.. +.|+||++||.+.. ...| ......|+++||.|+.+++++ .
T Consensus 79 ~~g~~-~~~~~~p~~~~-----~~p~vv~~HG~~~~-----------~~~~----~~~~~~la~~G~~vv~~d~~g---~ 134 (306)
T 3vis_A 79 ADGFG-GGTIYYPRENN-----TYGAIAISPGYTGT-----------QSSI----AWLGERIASHGFVVIAIDTNT---T 134 (306)
T ss_dssp CSSSC-CEEEEEESSCS-----CEEEEEEECCTTCC-----------HHHH----HHHHHHHHTTTEEEEEECCSS---T
T ss_pred cCCCc-ceEEEeeCCCC-----CCCEEEEeCCCcCC-----------HHHH----HHHHHHHHhCCCEEEEecCCC---C
Confidence 45544 46788887632 48999999996521 1112 234567889999999977753 4
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHc------CCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC
Q 011049 312 GDKLPNDRFVEQLVSSAEAAVEEVVRR------GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP 385 (494)
Q Consensus 312 g~~~~~~~~~~~~~~d~~~~v~~l~~~------~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~ 385 (494)
|.+ ......|+.++++++.+. ..+|.+|++++|||+||.+++.++.++|+ ++++|+++|...
T Consensus 135 g~s------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~----- 202 (306)
T 3vis_A 135 LDQ------PDSRARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL----- 202 (306)
T ss_dssp TCC------HHHHHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS-----
T ss_pred CCC------cchHHHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC-----
Confidence 433 123357888999999987 66888999999999999999999999987 899999888532
Q ss_pred CCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHH-HHHHHHHHHHhCCCcEEEEEcCCCCCccCC
Q 011049 386 FGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPM-QAERFFDALKGHGALSRLVLLPFEHHVYAA 464 (494)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~-~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~ 464 (494)
...+.++++|+|+++|++|..+| .. +++.+++.++..+ +++++++++.+|.+..
T Consensus 203 ----------------------~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~l~~~~-~~~~~~~~g~gH~~~~ 257 (306)
T 3vis_A 203 ----------------------NKSWRDITVPTLIIGAEYDTIAS--VTLHSKPFYNSIPSPT-DKAYLELDGASHFAPN 257 (306)
T ss_dssp ----------------------CCCCTTCCSCEEEEEETTCSSSC--TTTTHHHHHHTCCTTS-CEEEEEETTCCTTGGG
T ss_pred ----------------------ccccccCCCCEEEEecCCCcccC--cchhHHHHHHHhccCC-CceEEEECCCCccchh
Confidence 12345678999999999999998 77 6889999888766 7999999999999764
Q ss_pred cccHHHHHHHHHHHHHHhcCCCC
Q 011049 465 RENVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 465 ~~~~~~~~~~~~~fl~~~l~~~~ 487 (494)
+....+.+.+.+||++++++..
T Consensus 258 -~~~~~~~~~i~~fl~~~l~~~~ 279 (306)
T 3vis_A 258 -ITNKTIGMYSVAWLKRFVDEDT 279 (306)
T ss_dssp -SCCHHHHHHHHHHHHHHHSCCG
T ss_pred -hchhHHHHHHHHHHHHHccCcc
Confidence 3346788899999999998653
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-20 Score=181.87 Aligned_cols=240 Identities=14% Similarity=0.097 Sum_probs=158.5
Q ss_pred cccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCC--chhHHHHHhCCeE
Q 011049 222 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMT--PTSSLIFLARRFA 299 (494)
Q Consensus 222 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~G~~ 299 (494)
+..+.+++++.||..+.++.+.|....+...++.|+||++||.+.+. ..|.... ...+..|+++||.
T Consensus 25 ~~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~-----------~~~~~~~~~~~~a~~l~~~G~~ 93 (377)
T 1k8q_A 25 YPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASA-----------TNWISNLPNNSLAFILADAGYD 93 (377)
T ss_dssp CCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCG-----------GGGSSSCTTTCHHHHHHHTTCE
T ss_pred CCceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCch-----------hhhhcCCCcccHHHHHHHCCCC
Confidence 45788889999999999998876542111112478999999975322 2232221 1344578889999
Q ss_pred EEeCCCCCCCCCCCCCCC-----------chhHHHHHH-HHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC
Q 011049 300 VLAGPSIPIIGEGDKLPN-----------DRFVEQLVS-SAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 367 (494)
Q Consensus 300 v~~~~~~~~~g~g~~~~~-----------~~~~~~~~~-d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~ 367 (494)
|+++|.+ |+|.+... ......... |+.++++++.+.. +.+++.++|||+||.+++.++.++|+
T Consensus 94 vi~~D~~---G~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~--~~~~~~lvG~S~Gg~ia~~~a~~~p~ 168 (377)
T 1k8q_A 94 VWLGNSR---GNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKT--GQDKLHYVGHSQGTTIGFIAFSTNPK 168 (377)
T ss_dssp EEECCCT---TSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHHCHH
T ss_pred EEEecCC---CCCCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhc--CcCceEEEEechhhHHHHHHHhcCch
Confidence 9997765 44544321 122455666 9999999887752 34689999999999999999999998
Q ss_pred ---ceeEEEeCCCCCCCCCCCCCccc-----------ccc----cc----------------------------------
Q 011049 368 ---LFCCGIARSGSYNKTLTPFGFQT-----------EFR----TL---------------------------------- 395 (494)
Q Consensus 368 ---~~~a~v~~~~~~~~~~~~~~~~~-----------~~~----~~---------------------------------- 395 (494)
+++++|+++|..........+.. ... .+
T Consensus 169 ~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (377)
T 1k8q_A 169 LAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDT 248 (377)
T ss_dssp HHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCG
T ss_pred hhhhhhEEEEeCCchhcccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCc
Confidence 89999999987543211100000 000 00
Q ss_pred --c--c----------------------------------------cHHHHHhc-CccccccCCCCCEEEEecCCCCCCC
Q 011049 396 --W--E----------------------------------------ATNVYIEM-SPITHANKIKKPILIIHGEVDDKVG 430 (494)
Q Consensus 396 --~--~----------------------------------------~~~~~~~~-sp~~~~~~~~~P~li~~G~~D~~v~ 430 (494)
+ . +...|... .+...+.++++|+|+++|++|..+|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 328 (377)
T 1k8q_A 249 MNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLAD 328 (377)
T ss_dssp GGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSC
T ss_pred ccCCHHHHHHHhccCCCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccC
Confidence 0 0 00000000 1123377889999999999999998
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCC--cccHHHHHHHHHHHHHHh
Q 011049 431 LFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA--RENVMHVIWETDRWLQKY 482 (494)
Q Consensus 431 ~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~--~~~~~~~~~~~~~fl~~~ 482 (494)
+..++++.+.+... .+++++++++|.... .+....+.+.+.+||++|
T Consensus 329 --~~~~~~~~~~~~~~---~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 377 (377)
T 1k8q_A 329 --PHDVDLLLSKLPNL---IYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGTD 377 (377)
T ss_dssp --HHHHHHHHTTCTTE---EEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHTC
T ss_pred --HHHHHHHHHhCcCc---ccEEecCCCCceEEEecCCcHHHHHHHHHHHhccC
Confidence 88877776665431 248999999998653 356678889999999764
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=3.4e-20 Score=164.02 Aligned_cols=179 Identities=13% Similarity=0.085 Sum_probs=131.4
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC----------CCCCCCCCC---CchhH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP----------IIGEGDKLP---NDRFV 321 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~----------~~g~g~~~~---~~~~~ 321 (494)
.| ||++||.+. +...|. .....|+ .+|.|+.++... ..|.|.... .....
T Consensus 17 ~p-vv~lHG~g~-----------~~~~~~----~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~ 79 (209)
T 3og9_A 17 AP-LLLLHSTGG-----------DEHQLV----EIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESL 79 (209)
T ss_dssp CC-EEEECCTTC-----------CTTTTH----HHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHH
T ss_pred CC-EEEEeCCCC-----------CHHHHH----HHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHHH
Confidence 78 999999652 111221 2333444 889999866321 122222111 12234
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHH
Q 011049 322 EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNV 401 (494)
Q Consensus 322 ~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (494)
....+++.+.++.+.++..+|+++++|+|||+||++++.++.++|++++++|+++|......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------------ 141 (209)
T 3og9_A 80 DEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDF------------------ 141 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCC------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcc------------------
Confidence 45577777888888776668999999999999999999999999999999999998654211
Q ss_pred HHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 402 YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 402 ~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
.......++|+|++||++|..+| +.+++++++.|++.+.++++.+|+ .+|.+.. +....+.+||++
T Consensus 142 ------~~~~~~~~~p~li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~-~gH~~~~-----~~~~~~~~~l~~ 207 (209)
T 3og9_A 142 ------EQTVQLDDKHVFLSYAPNDMIVP--QKNFGDLKGDLEDSGCQLEIYESS-LGHQLTQ-----EEVLAAKKWLTE 207 (209)
T ss_dssp ------CCCCCCTTCEEEEEECTTCSSSC--HHHHHHHHHHHHHTTCEEEEEECS-STTSCCH-----HHHHHHHHHHHH
T ss_pred ------cccccccCCCEEEEcCCCCCccC--HHHHHHHHHHHHHcCCceEEEEcC-CCCcCCH-----HHHHHHHHHHHh
Confidence 01123457899999999999998 999999999999999999999998 6998752 456788999987
Q ss_pred h
Q 011049 482 Y 482 (494)
Q Consensus 482 ~ 482 (494)
+
T Consensus 208 ~ 208 (209)
T 3og9_A 208 T 208 (209)
T ss_dssp H
T ss_pred h
Confidence 5
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.9e-20 Score=175.71 Aligned_cols=240 Identities=14% Similarity=0.078 Sum_probs=157.8
Q ss_pred ccEEEEEEcCC-CceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 223 QKEMIKYQRKD-GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 223 ~~~~~~~~~~d-g~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
+.+.+++.+.. |.++.++ +.| .+ .++|+||++||++.. ++...|.... .....+++.||+|+
T Consensus 8 ~v~~~~~~S~~~~~~i~v~-~~p-~~-----~~~p~vvllHG~~~~---------~~~~~w~~~~-~~~~~~~~~~~~vv 70 (304)
T 1sfr_A 8 PVEYLQVPSPSMGRDIKVQ-FQS-GG-----ANSPALYLLDGLRAQ---------DDFSGWDINT-PAFEWYDQSGLSVV 70 (304)
T ss_dssp CCEEEEEEETTTTEEEEEE-EEC-CS-----TTBCEEEEECCTTCC---------SSSCHHHHHC-CHHHHHTTSSCEEE
T ss_pred eEEEEEEECccCCCceEEE-ECC-CC-----CCCCEEEEeCCCCCC---------CCcchhhcCC-CHHHHHhcCCeEEE
Confidence 56778888764 5677766 444 32 238999999997410 1111121111 12245667899999
Q ss_pred eCCCCCCCCCCCCCC---------CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEE
Q 011049 302 AGPSIPIIGEGDKLP---------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCG 372 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~---------~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~ 372 (494)
+++..+..++..... ...+.....+|+...+ .++..+++++++|+|+||||++|+.++.++|++|+++
T Consensus 71 ~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i---~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~ 147 (304)
T 1sfr_A 71 MPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWL---QANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYA 147 (304)
T ss_dssp EECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHHHH---HHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEE
T ss_pred EECCCCCccccccCCccccccccccccHHHHHHHHHHHHH---HHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEE
Confidence 987754433321100 1223222234544444 3433467789999999999999999999999999999
Q ss_pred EeCCCCCCCCCCCCCc------ccc----cccccc--cHHHHHhcCccccccCC---CCCEEEEecCCCC----------
Q 011049 373 IARSGSYNKTLTPFGF------QTE----FRTLWE--ATNVYIEMSPITHANKI---KKPILIIHGEVDD---------- 427 (494)
Q Consensus 373 v~~~~~~~~~~~~~~~------~~~----~~~~~~--~~~~~~~~sp~~~~~~~---~~P~li~~G~~D~---------- 427 (494)
++++|..+.....+.. ... ....|. ..+.+...+|...+.++ ++|++++||+.|+
T Consensus 148 v~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~l~~~~~pi~l~~G~~D~~~~~~~~~~~ 227 (304)
T 1sfr_A 148 GAMSGLLDPSQAMGPTLIGLAMGDAGGYKASDMWGPKEDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPA 227 (304)
T ss_dssp EEESCCSCTTSTTHHHHHHHHHHHTTSCCHHHHHCSTTSTHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHH
T ss_pred EEECCccCccccchhhhhhHhhhhccccchHHhcCCcchhhhHhcCHHHHHHHhhhcCCeEEEEecCCCCcccccccccc
Confidence 9999987643211000 000 000011 12346677887776665 5899999999998
Q ss_pred ----CCCCCHHHHHHHHHHHHhCC-CcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCCCC
Q 011049 428 ----KVGLFPMQAERFFDALKGHG-ALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 428 ----~v~~~~~~~~~~~~~l~~~g-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~ 487 (494)
.++ ..++++++++|+++| +++++.+|++++|.+. .+...+..++.||.++|+..+
T Consensus 228 ~~~e~~~--~~~~~~~~~~L~~~G~~~v~~~~~~~g~H~~~---~w~~~l~~~l~~l~~~l~~~~ 287 (304)
T 1sfr_A 228 KFLEGFV--RTSNIKFQDAYNAGGGHNGVFDFPDSGTHSWE---YWGAQLNAMKPDLQRALGATP 287 (304)
T ss_dssp HHHHHHH--HHHHHHHHHHHHHTTCCSEEEECCSCCCSSHH---HHHHHHHHTHHHHHHHHTCCC
T ss_pred chhHHHH--HHHHHHHHHHHHhCCCCceEEEecCCCccCHH---HHHHHHHHHHHHHHHhcCCCc
Confidence 555 889999999999999 9999999987799753 345667788999999997543
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=3.3e-21 Score=181.63 Aligned_cols=226 Identities=18% Similarity=0.109 Sum_probs=154.0
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHH-hCCeEEE
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVL 301 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~ 301 (494)
..+.+++++.+| .+.+++| +. .++.|+||++|||+|.. ++...+. .....|+ ..||.|+
T Consensus 55 ~~~~~~i~~~~g-~i~~~~y-~~------~~~~p~vv~~HGgg~~~--------g~~~~~~----~~~~~la~~~g~~Vv 114 (311)
T 1jji_A 55 RVEDRTIKGRNG-DIRVRVY-QQ------KPDSPVLVYYHGGGFVI--------CSIESHD----ALCRRIARLSNSTVV 114 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEE-ES------SSSEEEEEEECCSTTTS--------CCTGGGH----HHHHHHHHHHTSEEE
T ss_pred eEEEEEecCCCC-cEEEEEE-cC------CCCceEEEEECCccccc--------CChhHhH----HHHHHHHHHhCCEEE
Confidence 478889998888 8999998 42 12379999999987533 2222221 3445666 5899999
Q ss_pred eCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEecChHHHHHHHHHHhCCCc----eeEEEe
Q 011049 302 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPHL----FCCGIA 374 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~~~p~~----~~a~v~ 374 (494)
.+++++ .|.+.. .....|+.++++|+.+.. .+|+++|+|+|+|+||++++.++.++|++ ++++|+
T Consensus 115 ~~dyrg---~g~~~~-----p~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl 186 (311)
T 1jji_A 115 SVDYRL---APEHKF-----PAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQIL 186 (311)
T ss_dssp EEECCC---TTTSCT-----THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred EecCCC---CCCCCC-----CCcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEE
Confidence 977764 443322 123567788888887752 36788999999999999999999887765 999999
Q ss_pred CCCCCCCCCCCCCcccccccc--ccc------HHHH---------HhcCccc-cccCCCCCEEEEecCCCCCCCCCHHHH
Q 011049 375 RSGSYNKTLTPFGFQTEFRTL--WEA------TNVY---------IEMSPIT-HANKIKKPILIIHGEVDDKVGLFPMQA 436 (494)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~--~~~------~~~~---------~~~sp~~-~~~~~~~P~li~~G~~D~~v~~~~~~~ 436 (494)
++|+.+.......+....... +.. ...| ...+|+. .+..+ +|+|+++|++|..+ .++
T Consensus 187 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~-~P~li~~G~~D~l~----~~~ 261 (311)
T 1jji_A 187 IYPVVNFVAPTPSLLEFGEGLWILDQKIMSWFSEQYFSREEDKFNPLASVIFADLENL-PPALIITAEYDPLR----DEG 261 (311)
T ss_dssp ESCCCCSSSCCHHHHHTSSSCSSCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCTTC-CCEEEEEEEECTTH----HHH
T ss_pred eCCccCCCCCCccHHHhcCCCccCCHHHHHHHHHHhCCCCccCCCcccCcccccccCC-ChheEEEcCcCcch----HHH
Confidence 999877432111000000000 000 0001 1124443 12222 69999999999974 567
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCccCCc----ccHHHHHHHHHHHHHH
Q 011049 437 ERFFDALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQK 481 (494)
Q Consensus 437 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~fl~~ 481 (494)
..+++.|++.++++++++|++++|.+... +....+++.+.+||++
T Consensus 262 ~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 262 EVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 88999999999999999999999987532 3345777888888864
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=184.48 Aligned_cols=234 Identities=18% Similarity=0.146 Sum_probs=158.3
Q ss_pred cccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 222 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 222 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
...+.++++. +|.+++++++.+. ..+.|+||++||.+. ....+. ......++++||.|+
T Consensus 133 ~~~~~~~i~~-~~~~l~~~~~~~~------~~~~p~vv~~HG~~~-----------~~~~~~---~~~~~~~~~~g~~vi 191 (405)
T 3fnb_A 133 IPLKSIEVPF-EGELLPGYAIISE------DKAQDTLIVVGGGDT-----------SREDLF---YMLGYSGWEHDYNVL 191 (405)
T ss_dssp CCCEEEEEEE-TTEEEEEEEECCS------SSCCCEEEEECCSSC-----------CHHHHH---HHTHHHHHHTTCEEE
T ss_pred CCcEEEEEeE-CCeEEEEEEEcCC------CCCCCEEEEECCCCC-----------CHHHHH---HHHHHHHHhCCcEEE
Confidence 3467788885 6789999988432 123699999999531 111111 112225568999999
Q ss_pred eCCCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCC
Q 011049 302 AGPSIPIIGEGDKLPN-DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 380 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~-~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~ 380 (494)
.++.++ +|.+... ..+..+...|+.++++++..+. ++|+|+|||+||++++.++.++| +++++|+.+|+.+
T Consensus 192 ~~D~~G---~G~s~~~~~~~~~~~~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~ 263 (405)
T 3fnb_A 192 MVDLPG---QGKNPNQGLHFEVDARAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYD 263 (405)
T ss_dssp EECCTT---STTGGGGTCCCCSCTHHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSC
T ss_pred EEcCCC---CcCCCCCCCCCCccHHHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCC
Confidence 977654 4444211 1111234678888889886554 78999999999999999999998 8999999999876
Q ss_pred CCC-----------CCCCccccc---------cccc---------------ccHHHHHhcCccccccCCCCCEEEEecCC
Q 011049 381 KTL-----------TPFGFQTEF---------RTLW---------------EATNVYIEMSPITHANKIKKPILIIHGEV 425 (494)
Q Consensus 381 ~~~-----------~~~~~~~~~---------~~~~---------------~~~~~~~~~sp~~~~~~~~~P~li~~G~~ 425 (494)
... .+....... ...| .....+...++...+.++++|+|+++|++
T Consensus 264 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~ 343 (405)
T 3fnb_A 264 VAEVFRISFSTALKAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAG 343 (405)
T ss_dssp HHHHHHHHCC------------------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEEEETT
T ss_pred HHHHHHHhhhhhhhCcHHHHHHHHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEEecCC
Confidence 210 000000000 0000 00122233344444788999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCcc--CCcccHHHHHHHHHHHHHHhcCCC
Q 011049 426 DDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVY--AARENVMHVIWETDRWLQKYCLSN 486 (494)
Q Consensus 426 D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~--~~~~~~~~~~~~~~~fl~~~l~~~ 486 (494)
|..+| +.++.++++.+++.+.+++++++++..|.. ...+....+.+.+.+||+++++++
T Consensus 344 D~~v~--~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~~k 404 (405)
T 3fnb_A 344 EDSEL--MRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIFKKK 404 (405)
T ss_dssp SCHHH--HHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC--
T ss_pred CcCCC--hHHHHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHHHHHHHHHhCcC
Confidence 99987 999999999999999999999997666542 234667788899999999999753
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=5.2e-20 Score=166.41 Aligned_cols=191 Identities=17% Similarity=0.175 Sum_probs=134.1
Q ss_pred CCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhC-----CeEEEeCCCCC----------------CCCCC
Q 011049 254 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-----RFAVLAGPSIP----------------IIGEG 312 (494)
Q Consensus 254 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----G~~v~~~~~~~----------------~~g~g 312 (494)
+.|+||++||.+.+. ..|. .....|+.+ ||.|+.++... ..+.+
T Consensus 22 ~~p~vv~lHG~g~~~-----------~~~~----~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 86 (239)
T 3u0v_A 22 HSASLIFLHGSGDSG-----------QGLR----MWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKIT 86 (239)
T ss_dssp CCEEEEEECCTTCCH-----------HHHH----HHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSS
T ss_pred CCcEEEEEecCCCch-----------hhHH----HHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCC
Confidence 379999999965211 1121 233355544 78888855421 11111
Q ss_pred CCCCC-chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccc
Q 011049 313 DKLPN-DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTE 391 (494)
Q Consensus 313 ~~~~~-~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~ 391 (494)
..... .....+..+++...++.+.+.+ +|.++++|+|||+||++++.++.++|++++++|+++|..+....
T Consensus 87 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~------- 158 (239)
T 3u0v_A 87 NDCPEHLESIDVMCQVLTDLIDEEVKSG-IKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASA------- 158 (239)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHHHHHTT-CCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCH-------
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHhC-CCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhH-------
Confidence 11111 2234555667777777666544 78899999999999999999999999999999999987542110
Q ss_pred cccccccHHHHHhcCccccccCCCCC-EEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHH
Q 011049 392 FRTLWEATNVYIEMSPITHANKIKKP-ILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMH 470 (494)
Q Consensus 392 ~~~~~~~~~~~~~~sp~~~~~~~~~P-~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~ 470 (494)
....+. .....+| +|++||++|..+| ..+++++++.|++.+.+++++++++++|.+. .+
T Consensus 159 ------~~~~~~-------~~~~~~pp~li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-----~~ 218 (239)
T 3u0v_A 159 ------VYQALQ-------KSNGVLPELFQCHGTADELVL--HSWAEETNSMLKSLGVTTKFHSFPNVYHELS-----KT 218 (239)
T ss_dssp ------HHHHHH-------HCCSCCCCEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCEEEEEETTCCSSCC-----HH
T ss_pred ------HHHHHH-------hhccCCCCEEEEeeCCCCccC--HHHHHHHHHHHHHcCCcEEEEEeCCCCCcCC-----HH
Confidence 000000 1234566 9999999999998 9999999999999999999999999999986 35
Q ss_pred HHHHHHHHHHHhcCCCC
Q 011049 471 VIWETDRWLQKYCLSNT 487 (494)
Q Consensus 471 ~~~~~~~fl~~~l~~~~ 487 (494)
..+.+.+||.+++....
T Consensus 219 ~~~~~~~~l~~~l~~~~ 235 (239)
T 3u0v_A 219 ELDILKLWILTKLPGEM 235 (239)
T ss_dssp HHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHhCCCcc
Confidence 67889999999997643
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.1e-20 Score=170.71 Aligned_cols=227 Identities=12% Similarity=0.069 Sum_probs=152.7
Q ss_pred ccEEEEE-EcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 223 QKEMIKY-QRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 223 ~~~~~~~-~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
+.+.+++ .+.||.++.+..+.+.+ + +.|+||++||.+.. ...+. .......++++||.|+
T Consensus 10 ~~~~~~~~~~~~g~~l~~~~~~~~~--~----~~~~vv~~HG~~~~-----------~~~~~--~~~~~~~l~~~g~~v~ 70 (270)
T 3llc_A 10 ETHAITVGQGSDARSIAALVRAPAQ--D----ERPTCIWLGGYRSD-----------MTGTK--ALEMDDLAASLGVGAI 70 (270)
T ss_dssp EEEEEEESSGGGCEEEEEEEECCSS--T----TSCEEEEECCTTCC-----------TTSHH--HHHHHHHHHHHTCEEE
T ss_pred CcceEEEeeccCcceEEEEeccCCC--C----CCCeEEEECCCccc-----------cccch--HHHHHHHHHhCCCcEE
Confidence 3455555 66799999888776653 1 26899999996521 11111 1123446668999999
Q ss_pred eCCCCCCCCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh---CC---CceeEEE
Q 011049 302 AGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH---AP---HLFCCGI 373 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~---~p---~~~~a~v 373 (494)
.++.+ |+|.+... .....+.++|+.++++++. .++++++|||+||.+++.++.+ +| ++++++|
T Consensus 71 ~~d~~---G~G~s~~~~~~~~~~~~~~d~~~~~~~l~------~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~i 141 (270)
T 3llc_A 71 RFDYS---GHGASGGAFRDGTISRWLEEALAVLDHFK------PEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMV 141 (270)
T ss_dssp EECCT---TSTTCCSCGGGCCHHHHHHHHHHHHHHHC------CSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEE
T ss_pred Eeccc---cCCCCCCccccccHHHHHHHHHHHHHHhc------cCCeEEEEeChHHHHHHHHHHHHHhccccccccceeE
Confidence 97765 44444322 2335666888888888772 5789999999999999999999 99 9999999
Q ss_pred eCCCCCCCCCCC-C-Cccc-----------------cccccc----ccHHHHHhcCccccccCCCCCEEEEecCCCCCCC
Q 011049 374 ARSGSYNKTLTP-F-GFQT-----------------EFRTLW----EATNVYIEMSPITHANKIKKPILIIHGEVDDKVG 430 (494)
Q Consensus 374 ~~~~~~~~~~~~-~-~~~~-----------------~~~~~~----~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~ 430 (494)
+.+|..+..... + .+.. .....+ ...+.+........+.++++|+|+++|++|..+|
T Consensus 142 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~ 221 (270)
T 3llc_A 142 LIAPAPDFTSDLIEPLLGDRERAELAENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVP 221 (270)
T ss_dssp EESCCTTHHHHTTGGGCCHHHHHHHHHHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCCCCSCEEEEEETTCSSSC
T ss_pred EecCcccchhhhhhhhhhhhhhhhhhccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhcCCCCEEEEecCCCCCCC
Confidence 999875521100 0 0000 000000 1112233344456677889999999999999998
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 431 LFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 431 ~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
...+.++++.+.. .+++++++++++|.+...+....+.+.+.+||++
T Consensus 222 --~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 222 --YQHALKLVEHLPA--DDVVLTLVRDGDHRLSRPQDIDRMRNAIRAMIEP 268 (270)
T ss_dssp --HHHHHHHHHTSCS--SSEEEEEETTCCSSCCSHHHHHHHHHHHHHHHC-
T ss_pred --HHHHHHHHHhcCC--CCeeEEEeCCCcccccccccHHHHHHHHHHHhcC
Confidence 8888888877654 3589999999999876555566677777777754
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.4e-20 Score=176.96 Aligned_cols=217 Identities=8% Similarity=-0.015 Sum_probs=149.1
Q ss_pred EEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHH-hCCeEEEeCCCCCCCCCCCCC
Q 011049 237 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIPIIGEGDKL 315 (494)
Q Consensus 237 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~~~~~g~g~~~ 315 (494)
+.++++.|.+ .+.|+||++|||+|..+ +...| ......|+ +.||.|+.+++++....
T Consensus 84 ~~~~~~~p~~------~~~p~vv~lHGgg~~~~--------~~~~~----~~~~~~la~~~g~~vi~~D~r~~~~~---- 141 (326)
T 3d7r_A 84 MQVFRFNFRH------QIDKKILYIHGGFNALQ--------PSPFH----WRLLDKITLSTLYEVVLPIYPKTPEF---- 141 (326)
T ss_dssp EEEEEEESTT------CCSSEEEEECCSTTTSC--------CCHHH----HHHHHHHHHHHCSEEEEECCCCTTTS----
T ss_pred EEEEEEeeCC------CCCeEEEEECCCcccCC--------CCHHH----HHHHHHHHHHhCCEEEEEeCCCCCCC----
Confidence 6778888875 12699999999875321 11111 12334555 46999999887653221
Q ss_pred CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCc----eeEEEeCCCCCCCCCCCCCcc-c
Q 011049 316 PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL----FCCGIARSGSYNKTLTPFGFQ-T 390 (494)
Q Consensus 316 ~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~----~~a~v~~~~~~~~~~~~~~~~-~ 390 (494)
.....++|+.++++++.++ ++.++++|+|||+||.+++.++.++|++ ++++|+.+|+.+......... .
T Consensus 142 ----~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~ 215 (326)
T 3d7r_A 142 ----HIDDTFQAIQRVYDQLVSE--VGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDA 215 (326)
T ss_dssp ----CHHHHHHHHHHHHHHHHHH--HCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCHH
T ss_pred ----CchHHHHHHHHHHHHHHhc--cCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHhh
Confidence 1245578899999999887 6789999999999999999999988776 999999999876432221111 0
Q ss_pred c-ccccccc-------HHHHH--------hcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEE
Q 011049 391 E-FRTLWEA-------TNVYI--------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVL 454 (494)
Q Consensus 391 ~-~~~~~~~-------~~~~~--------~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~ 454 (494)
. ....+.. ...|. ..+|+...-...+|+|+++|++|.. ..++..+.+.|++.+.++++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~----~~~~~~~~~~l~~~~~~~~~~~ 291 (326)
T 3d7r_A 216 LIEQDAVLSQFGVNEIMKKWANGLPLTDKRISPINGTIEGLPPVYMFGGGREMT----HPDMKLFEQMMLQHHQYIEFYD 291 (326)
T ss_dssp HHHHCSSCCHHHHHHHHHHHHTTSCTTSTTTSGGGSCCTTCCCEEEEEETTSTT----HHHHHHHHHHHHHTTCCEEEEE
T ss_pred hcccCcccCHHHHHHHHHHhcCCCCCCCCeECcccCCcccCCCEEEEEeCcccc----hHHHHHHHHHHHHCCCcEEEEE
Confidence 0 0000000 01111 1233332111226999999999963 6778899999999999999999
Q ss_pred cCCCCCccCC--cccHHHHHHHHHHHHHHhcCC
Q 011049 455 LPFEHHVYAA--RENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 455 ~~~~~H~~~~--~~~~~~~~~~~~~fl~~~l~~ 485 (494)
+++++|.+.. .+....+.+.+.+||.+++..
T Consensus 292 ~~g~~H~~~~~~~~~~~~~~~~i~~fl~~~l~~ 324 (326)
T 3d7r_A 292 YPKMVHDFPIYPIRQSHKAIKQIAKSIDEDVTQ 324 (326)
T ss_dssp ETTCCTTGGGSSSHHHHHHHHHHHHHHTSCCCC
T ss_pred eCCCcccccccCCHHHHHHHHHHHHHHHHHhhc
Confidence 9999998764 255667888999999888753
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.85 E-value=6e-20 Score=170.06 Aligned_cols=237 Identities=12% Similarity=0.104 Sum_probs=156.2
Q ss_pred ccccEEEEEEcC-CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeE
Q 011049 221 SLQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 299 (494)
Q Consensus 221 ~~~~~~~~~~~~-dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~ 299 (494)
..+.+.+++.+. +|.+++++ |+|++ .|+||++||++.. ++...|.... .....+++.||+
T Consensus 8 ~~~~~~~~~~S~~~~~~~~~~-~~P~~--------~p~vvllHG~~~~---------~~~~~w~~~~-~~~~~~~~~~~~ 68 (280)
T 1r88_A 8 AAPYENLMVPSPSMGRDIPVA-FLAGG--------PHAVYLLDAFNAG---------PDVSNWVTAG-NAMNTLAGKGIS 68 (280)
T ss_dssp CCCCEEEEEEETTTTEEEEEE-EECCS--------SSEEEEECCSSCC---------SSSCHHHHTS-CHHHHHTTSSSE
T ss_pred CCCEEEEEEECcccCCcceEE-EeCCC--------CCEEEEECCCCCC---------CChhhhhhcc-cHHHHHhcCCeE
Confidence 446788888875 68889998 78864 2899999997410 1111121110 123456778999
Q ss_pred EEeCCCCCCCCCCC--CCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCC
Q 011049 300 VLAGPSIPIIGEGD--KLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 377 (494)
Q Consensus 300 v~~~~~~~~~g~g~--~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 377 (494)
|++++..++.++.. ......+.....+|+... +.++..+|+++++|+|+||||++|+.++.++|++|+++++++|
T Consensus 69 vv~pd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg 145 (280)
T 1r88_A 69 VVAPAGGAYSMYTNWEQDGSKQWDTFLSAELPDW---LAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSG 145 (280)
T ss_dssp EEEECCCTTSTTSBCSSCTTCBHHHHHHTHHHHH---HHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESC
T ss_pred EEEECCCCCCccCCCCCCCCCcHHHHHHHHHHHH---HHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECC
Confidence 99988754333321 111123333344455444 4443447888999999999999999999999999999999999
Q ss_pred CCCCCCCCC-C-----ccc----cccccccc--HHHHHhcCccccccCC---CCCEEEEe----cCCCCC-------CCC
Q 011049 378 SYNKTLTPF-G-----FQT----EFRTLWEA--TNVYIEMSPITHANKI---KKPILIIH----GEVDDK-------VGL 431 (494)
Q Consensus 378 ~~~~~~~~~-~-----~~~----~~~~~~~~--~~~~~~~sp~~~~~~~---~~P~li~~----G~~D~~-------v~~ 431 (494)
..+...... . ... .....|.. .+.+...+|+.++.++ ++|+++.| |+.|.. ++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~- 224 (280)
T 1r88_A 146 FLYPSNTTTNGAIAAGMQQFGGVDTNGMWGAPQLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEA- 224 (280)
T ss_dssp CCCTTSHHHHHHHHHHHHHHHCCCTHHHHCCGGGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHH-
T ss_pred ccCcCCccchhhHHHHhhhccccchhhhcCCCchhhhHhcCHHHHHHhhhccCCeEEEEeccCCCCCCcccccchhHHH-
Confidence 876421000 0 000 00001111 1245566787766665 58999999 999984 45
Q ss_pred CHHHHHHHHHHHHhCC-CcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 432 FPMQAERFFDALKGHG-ALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 432 ~~~~~~~~~~~l~~~g-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
..++++++++|++.| +++++.+|++++|.+. .+...+...+.||.+-+.
T Consensus 225 -~~~~~~~~~~L~~~g~~~~~~~~~~~g~H~~~---~w~~~l~~~l~~~~~~~~ 274 (280)
T 1r88_A 225 -MGNSRMFYNQYRSVGGHNGHFDFPASGDNGWG---SWAPQLGAMSGDIVGAIR 274 (280)
T ss_dssp -HHHHHHHHHHHHHTTCCSEEEECCSSCCSSHH---HHHHHHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHHHCCCcceEEEecCCCCcChh---HHHHHHHHHHHHHHHHHh
Confidence 899999999999999 9999999988899763 334555666777766554
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.6e-19 Score=168.47 Aligned_cols=208 Identities=14% Similarity=0.100 Sum_probs=137.3
Q ss_pred cccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCC---CchhHHHHHhC--
Q 011049 222 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGM---TPTSSLIFLAR-- 296 (494)
Q Consensus 222 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~-- 296 (494)
.+.+.++|.+.+| .+.+++|+|+++++.+ ++|+|+++||++... ..|... .......|+++
T Consensus 39 g~~~~~~~~s~~~-~~~~~vy~P~~~~~~~--~~Pvlv~lHG~~~~~-----------~~~~~~~~~~~~~~~~l~~~g~ 104 (297)
T 1gkl_A 39 GRIVKETYTGING-TKSLNVYLPYGYDPNK--KYNIFYLMHGGGENE-----------NTIFSNDVKLQNILDHAIMNGE 104 (297)
T ss_dssp CEEEEEEEEETTE-EEEEEEEECTTCCTTS--CCEEEEEECCTTCCT-----------TSTTSTTTCHHHHHHHHHHTTS
T ss_pred ceEEEEEEEcCCC-EEEEEEEeCCCCCCCC--CCCEEEEECCCCCCc-----------chhhcccchHHHHHHHHHHcCC
Confidence 3567889998886 9999999999987543 499999999976321 112110 11234456666
Q ss_pred --CeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---------CCCCCcEEEEecChHHHHHHHHHHhC
Q 011049 297 --RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---------VADPSRIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 297 --G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~---------~~d~~ri~i~G~S~GG~~a~~~~~~~ 365 (494)
+|+|++++.++..+ ....+....++|+...++...... ..|+++++|+|+||||++|+.++.++
T Consensus 105 ~~~~ivv~pd~~~~~~-----~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~ 179 (297)
T 1gkl_A 105 LEPLIVVTPTFNGGNC-----TAQNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNC 179 (297)
T ss_dssp SCCEEEEECCSCSTTC-----CTTTHHHHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHH
T ss_pred CCCEEEEEecCcCCcc-----chHHHHHHHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhC
Confidence 59999987654221 223444444555555444332111 03678899999999999999999999
Q ss_pred CCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 011049 366 PHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG 445 (494)
Q Consensus 366 p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~ 445 (494)
|++|+++++++|....... .. ........+... ..+.+...++++.+|+.|.. ..+++++.++|++
T Consensus 180 p~~f~~~v~~sg~~~~~~~-----~~--~~~~~~~~~~~~---~~~~~~~~~l~~~~G~~D~~----~~~~~~l~~~L~~ 245 (297)
T 1gkl_A 180 LDYVAYFMPLSGDYWYGNS-----PQ--DKANSIAEAINR---SGLSKREYFVFAATGSEDIA----YANMNPQIEAMKA 245 (297)
T ss_dssp TTTCCEEEEESCCCCBSSS-----HH--HHHHHHHHHHHH---HTCCTTSCEEEEEEETTCTT----HHHHHHHHHHHHT
T ss_pred chhhheeeEeccccccCCc-----cc--hhhhHHHHHHhh---ccCCcCcEEEEEEeCCCccc----chhHHHHHHHHHH
Confidence 9999999999997532110 00 000000111111 11222345677789999975 5688999999999
Q ss_pred CC----------CcEEEEEcCCCCCcc
Q 011049 446 HG----------ALSRLVLLPFEHHVY 462 (494)
Q Consensus 446 ~g----------~~~~~~~~~~~~H~~ 462 (494)
++ +++++.++++++|.+
T Consensus 246 ~g~~~~~~~~~~~~~~~~~~~g~gH~~ 272 (297)
T 1gkl_A 246 LPHFDYTSDFSKGNFYFLVAPGATHWW 272 (297)
T ss_dssp STTCCBBSCTTTCCEEEEEETTCCSSH
T ss_pred cCCccccccccCCceEEEECCCCCcCH
Confidence 98 689999999999975
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.5e-21 Score=177.22 Aligned_cols=200 Identities=13% Similarity=0.108 Sum_probs=136.2
Q ss_pred CCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHH----HhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHH
Q 011049 253 GPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF----LARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSA 328 (494)
Q Consensus 253 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~ 328 (494)
.+.|+||++|||+|..+.. +...| ......| +++||.|+.+++++... . . ....++|+
T Consensus 39 ~~~p~vv~lHGgg~~~g~~------~~~~~----~~~~~~L~~~a~~~g~~vi~~d~r~~~~---~----~-~~~~~~d~ 100 (273)
T 1vkh_A 39 NTREAVIYIHGGAWNDPEN------TPNDF----NQLANTIKSMDTESTVCQYSIEYRLSPE---I----T-NPRNLYDA 100 (273)
T ss_dssp TCCEEEEEECCSTTTCTTC------CGGGG----HHHHHHHHHHCTTCCEEEEEECCCCTTT---S----C-TTHHHHHH
T ss_pred CCCeEEEEECCCcccCCcC------ChHHH----HHHHHHHhhhhccCCcEEEEeecccCCC---C----C-CCcHHHHH
Confidence 3479999999987543210 11112 1234455 57999999988764321 1 1 12457788
Q ss_pred HHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC-----------------CCceeEEEeCCCCCCCCCCCC---Cc
Q 011049 329 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-----------------PHLFCCGIARSGSYNKTLTPF---GF 388 (494)
Q Consensus 329 ~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~-----------------p~~~~a~v~~~~~~~~~~~~~---~~ 388 (494)
.++++++.++ ++.++++|+|||+||++++.++.++ |++++++|+.+|+.+...... .+
T Consensus 101 ~~~~~~l~~~--~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~ 178 (273)
T 1vkh_A 101 VSNITRLVKE--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEY 178 (273)
T ss_dssp HHHHHHHHHH--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGGG
T ss_pred HHHHHHHHHh--CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhcccH
Confidence 8999999887 4678999999999999999999885 789999999998765211000 00
Q ss_pred cc-------ccccccc-cHHHHHhcCccc--cccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCC
Q 011049 389 QT-------EFRTLWE-ATNVYIEMSPIT--HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFE 458 (494)
Q Consensus 389 ~~-------~~~~~~~-~~~~~~~~sp~~--~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 458 (494)
.. .....|. .. ...++.. ....+++|+|++||++|..+| +.+++++++.|++.+.++++++++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~l~~~~~~~~~~~~~~~ 253 (273)
T 1vkh_A 179 DCFTRLAFPDGIQMYEEEP---SRVMPYVKKALSRFSIDMHLVHSYSDELLT--LRQTNCLISCLQDYQLSFKLYLDDLG 253 (273)
T ss_dssp HHHHHHHCTTCGGGCCCCH---HHHHHHHHHHHHHHTCEEEEEEETTCSSCC--THHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred HHHHHHHhcccccchhhcc---cccChhhhhcccccCCCEEEEecCCcCCCC--hHHHHHHHHHHHhcCCceEEEEeCCC
Confidence 00 0000111 11 1111211 122367999999999999998 99999999999999999999999999
Q ss_pred CCccCCcccHHHHHHHHHHHH
Q 011049 459 HHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 459 ~H~~~~~~~~~~~~~~~~~fl 479 (494)
+|.+.. +. ..+.+.+.+||
T Consensus 254 gH~~~~-~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 254 LHNDVY-KN-GKVAKYIFDNI 272 (273)
T ss_dssp SGGGGG-GC-HHHHHHHHHTC
T ss_pred cccccc-cC-hHHHHHHHHHc
Confidence 999754 33 56777777775
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.84 E-value=2.5e-20 Score=169.30 Aligned_cols=204 Identities=16% Similarity=0.108 Sum_probs=144.0
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCc---h-hHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---R-FVEQLVSSAEA 330 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~-~~~~~~~d~~~ 330 (494)
.|+||++||.+. +...| ......|+++||.|++++.+ |+|.+.... . ..+...+|+.+
T Consensus 22 ~~~vv~~HG~~~-----------~~~~~----~~~~~~l~~~G~~v~~~d~~---g~g~s~~~~~~~~~~~~~~~~d~~~ 83 (251)
T 3dkr_A 22 DTGVVLLHAYTG-----------SPNDM----NFMARALQRSGYGVYVPLFS---GHGTVEPLDILTKGNPDIWWAESSA 83 (251)
T ss_dssp SEEEEEECCTTC-----------CGGGG----HHHHHHHHHTTCEEEECCCT---TCSSSCTHHHHHHCCHHHHHHHHHH
T ss_pred CceEEEeCCCCC-----------CHHHH----HHHHHHHHHCCCEEEecCCC---CCCCCChhhhcCcccHHHHHHHHHH
Confidence 688999999652 11222 24566788899999996664 555553221 1 34556788999
Q ss_pred HHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCccccc---------cc---cc--
Q 011049 331 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEF---------RT---LW-- 396 (494)
Q Consensus 331 ~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~---------~~---~~-- 396 (494)
+++++..+ .++++++|||+||++++.++.++|++++++++.+|............... .. .+
T Consensus 84 ~i~~l~~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T 3dkr_A 84 AVAHMTAK----YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKSDESTQIL 159 (251)
T ss_dssp HHHHHHTT----CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred HHHHHHHh----cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHHHHHHHHHHhhcccCcchhhHH
Confidence 99998776 47999999999999999999999999999999988765321100000000 00 00
Q ss_pred ----ccHHHHHh--cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHH
Q 011049 397 ----EATNVYIE--MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMH 470 (494)
Q Consensus 397 ----~~~~~~~~--~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~ 470 (494)
.....+.. ..+...+.++++|+|+++|++|..+| +..+..+++.+... .+++++++++++|.+........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~ 236 (251)
T 3dkr_A 160 AYLPGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVD--GRLAYQLRDALINA-ARVDFHWYDDAKHVITVNSAHHA 236 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSBC--TTHHHHHHHHCTTC-SCEEEEEETTCCSCTTTSTTHHH
T ss_pred hhhHHHHHHHHHHHHHHhccccccCCCEEEEecCCCcccC--hHHHHHHHHHhcCC-CCceEEEeCCCCcccccccchhH
Confidence 00000000 11244567789999999999999998 88888998888764 56899999999999876555788
Q ss_pred HHHHHHHHHHHhc
Q 011049 471 VIWETDRWLQKYC 483 (494)
Q Consensus 471 ~~~~~~~fl~~~l 483 (494)
+.+.+.+||++..
T Consensus 237 ~~~~i~~fl~~~~ 249 (251)
T 3dkr_A 237 LEEDVIAFMQQEN 249 (251)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhc
Confidence 9999999998764
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.5e-20 Score=183.72 Aligned_cols=229 Identities=13% Similarity=0.069 Sum_probs=150.7
Q ss_pred cccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 222 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 222 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
...+.++++. +|..+.++++.|++ .++.|+||++||.+.. ...+ .......|+++||.|+
T Consensus 166 ~~~~~v~i~~-~g~~l~~~~~~P~~-----~~~~P~vv~~hG~~~~-----------~~~~---~~~~~~~l~~~G~~V~ 225 (415)
T 3mve_A 166 YIIKQLEIPF-EKGKITAHLHLTNT-----DKPHPVVIVSAGLDSL-----------QTDM---WRLFRDHLAKHDIAML 225 (415)
T ss_dssp SEEEEEEEEC-SSSEEEEEEEESCS-----SSCEEEEEEECCTTSC-----------GGGG---HHHHHHTTGGGTCEEE
T ss_pred CCeEEEEEEE-CCEEEEEEEEecCC-----CCCCCEEEEECCCCcc-----------HHHH---HHHHHHHHHhCCCEEE
Confidence 3578888886 88899999999986 2348999999996411 0001 1122345678999999
Q ss_pred eCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCC
Q 011049 302 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 381 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~ 381 (494)
.++.++ +|.+...... .+.......+++++.....+|+++|+|+|||+||++++.++..+|++++++|+.+|+.+.
T Consensus 226 ~~D~~G---~G~s~~~~~~-~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~ 301 (415)
T 3mve_A 226 TVDMPS---VGYSSKYPLT-EDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHD 301 (415)
T ss_dssp EECCTT---SGGGTTSCCC-SCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSH
T ss_pred EECCCC---CCCCCCCCCC-CCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCcccc
Confidence 977654 4433211100 001122246778888887788999999999999999999999999999999999997541
Q ss_pred CCCCCCc----cc--------ccc-cccccHH---HHHhcCcccc----ccCCCCCEEEEecCCCCCCCCCHHHHHHHHH
Q 011049 382 TLTPFGF----QT--------EFR-TLWEATN---VYIEMSPITH----ANKIKKPILIIHGEVDDKVGLFPMQAERFFD 441 (494)
Q Consensus 382 ~~~~~~~----~~--------~~~-~~~~~~~---~~~~~sp~~~----~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~ 441 (494)
......+ .. ..+ ....... .+...++... +.++++|+|+++|++|..+| ..++..+.+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp--~~~~~~l~~ 379 (415)
T 3mve_A 302 IFASPQKLQQMPKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSP--YSDNQMVAF 379 (415)
T ss_dssp HHHCHHHHTTSCHHHHHHHHHHTTCSSBCHHHHHHHGGGGCTTTTTTTTSSCBSSCEEEEEETTCSSSC--HHHHHHHHH
T ss_pred ccccHHHHHHhHHHHHHHHHHHhCCCccCHHHHHHHHhhcCcccccccccCCCCCCEEEEEeCCCCCCC--HHHHHHHHH
Confidence 1000000 00 000 0001111 1122233222 45788999999999999998 887766555
Q ss_pred HHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 442 ALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 442 ~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
.+.+++++++++. +. ..........+.+||.++|.
T Consensus 380 ----~~~~~~l~~i~g~-~~---h~~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 380 ----FSTYGKAKKISSK-TI---TQGYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp ----TBTTCEEEEECCC-SH---HHHHHHHHHHHHHHHHHHHT
T ss_pred ----hCCCceEEEecCC-Cc---ccchHHHHHHHHHHHHHHhc
Confidence 5667899999982 21 12456788899999999885
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.5e-19 Score=160.47 Aligned_cols=184 Identities=18% Similarity=0.209 Sum_probs=137.1
Q ss_pred CCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh--CCeEEEeCCCC----------------CCCCCCCCC
Q 011049 254 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA--RRFAVLAGPSI----------------PIIGEGDKL 315 (494)
Q Consensus 254 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~~----------------~~~g~g~~~ 315 (494)
+.|+||++||.+.+ ...| ......|++ +||.|+.++.+ +..|+|.+.
T Consensus 23 ~~~~vv~lHG~~~~-----------~~~~----~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~ 87 (226)
T 3cn9_A 23 ADACIIWLHGLGAD-----------RTDF----KPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPAR 87 (226)
T ss_dssp CCEEEEEECCTTCC-----------GGGG----HHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTT
T ss_pred CCCEEEEEecCCCC-----------hHHH----HHHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccc
Confidence 48999999997521 1112 234556776 99999997654 223444332
Q ss_pred CC-chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHH-hCCCceeEEEeCCCCCCCCCCCCCcccccc
Q 011049 316 PN-DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA-HAPHLFCCGIARSGSYNKTLTPFGFQTEFR 393 (494)
Q Consensus 316 ~~-~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~ 393 (494)
.. .....+.++++..+++.+.+.+ +|+++++++|||+||.+++.++. ++|++++++|+++|..+...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~---------- 156 (226)
T 3cn9_A 88 AIDEDQLNASADQVIALIDEQRAKG-IAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFD---------- 156 (226)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHTT-CCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGG----------
T ss_pred cccchhHHHHHHHHHHHHHHHHHcC-CCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCch----------
Confidence 22 2334566777778888777633 67889999999999999999999 99999999999998643210
Q ss_pred cccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHH
Q 011049 394 TLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIW 473 (494)
Q Consensus 394 ~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~ 473 (494)
.+ .. ...++++|+|+++|++|..+| +.+++++++.+++.+.++++++++ ++|.+.. +..+
T Consensus 157 -~~-------~~----~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~-----~~~~ 216 (226)
T 3cn9_A 157 -DL-------AL----DERHKRIPVLHLHGSQDDVVD--PALGRAAHDALQAQGVEVGWHDYP-MGHEVSL-----EEIH 216 (226)
T ss_dssp -GC-------CC----CTGGGGCCEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCEEEEEES-CCSSCCH-----HHHH
T ss_pred -hh-------hh----cccccCCCEEEEecCCCCccC--HHHHHHHHHHHHHcCCceeEEEec-CCCCcch-----hhHH
Confidence 00 00 124567999999999999998 999999999999999899999999 9998742 3467
Q ss_pred HHHHHHHHhc
Q 011049 474 ETDRWLQKYC 483 (494)
Q Consensus 474 ~~~~fl~~~l 483 (494)
.+.+||.++|
T Consensus 217 ~i~~~l~~~l 226 (226)
T 3cn9_A 217 DIGAWLRKRL 226 (226)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhhC
Confidence 7999999875
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.1e-20 Score=173.63 Aligned_cols=228 Identities=16% Similarity=0.139 Sum_probs=147.4
Q ss_pred cEEEEEE---cCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEE
Q 011049 224 KEMIKYQ---RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 300 (494)
Q Consensus 224 ~~~~~~~---~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 300 (494)
...++|. +.+|.++.+++|.|++.. .+.|+||++||+++.. ..| .......++++||.|
T Consensus 24 ~~~~~~~~~~~~~~~~l~~~~~~P~~~~----~~~p~vv~lHG~~~~~-----------~~~---~~~~~~~l~~~g~~v 85 (304)
T 3d0k_A 24 RNAIPYLDDDRNADRPFTLNTYRPYGYT----PDRPVVVVQHGVLRNG-----------ADY---RDFWIPAADRHKLLI 85 (304)
T ss_dssp EEEEEECC---CTTCCEEEEEEECTTCC----TTSCEEEEECCTTCCH-----------HHH---HHHTHHHHHHHTCEE
T ss_pred CceEEecccCCCCCceEEEEEEeCCCCC----CCCcEEEEeCCCCCCH-----------HHH---HHHHHHHHHHCCcEE
Confidence 3446666 678889999999998643 2379999999986321 111 012345677899999
Q ss_pred EeCCCCCC---------CCC--CCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC-c
Q 011049 301 LAGPSIPI---------IGE--GDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-L 368 (494)
Q Consensus 301 ~~~~~~~~---------~g~--g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~-~ 368 (494)
+.++++.. .|+ |.+............|+.++++++.++..+|+++|+|+|||+||++++.++.++|+ +
T Consensus 86 ~~~d~~~~~~p~~~~~~~g~~~g~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~ 165 (304)
T 3d0k_A 86 VAPTFSDEIWPGVESYNNGRAFTAAGNPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAP 165 (304)
T ss_dssp EEEECCTTTSCHHHHTTTTTCBCTTSCBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTT
T ss_pred EEeCCccccCCCccccccCccccccCCCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCc
Confidence 99887632 022 32211111112234678888999998877899999999999999999999999995 7
Q ss_pred eeEEEeCC-CCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCC---------------
Q 011049 369 FCCGIARS-GSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLF--------------- 432 (494)
Q Consensus 369 ~~a~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~--------------- 432 (494)
++++|+.. |.++.......+.. +.. . ...+|......+++|+|++||++|..+..|
T Consensus 166 ~~~~vl~~~~~~~~~~~~~~~~~--~~~--~----~~~~~~~~~~~~~~p~li~~G~~D~~~~~p~~~~~~~~~~~~~~~ 237 (304)
T 3d0k_A 166 FHAVTAANPGWYTLPTFEHRFPE--GLD--G----VGLTEDHLARLLAYPMTILAGDQDIATDDPNLPSEPAALRQGPHR 237 (304)
T ss_dssp CSEEEEESCSSCCCSSTTSBTTT--SSB--T----TTCCHHHHHHHHHSCCEEEEETTCCCC--CCSCCSHHHHTTCSSH
T ss_pred eEEEEEecCcccccCCccccCcc--ccC--C----CCCCHHHHHhhhcCCEEEEEeCCCCCccccccccChhhhccCccH
Confidence 88887554 55442211100000 000 0 011333333445689999999999974101
Q ss_pred HHHHHHHHHHHH----hCCCc--EEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 433 PMQAERFFDALK----GHGAL--SRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 433 ~~~~~~~~~~l~----~~g~~--~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
...+..+++.++ +.+.+ ++++++|+++|.+. .....+.+||.+..
T Consensus 238 ~~~~~~~~~~l~~~a~~~g~~~~~~~~~~pg~gH~~~------~~~~~~~~~~~~~~ 288 (304)
T 3d0k_A 238 YARARHYYEAGQRAAAQRGLPFGWQLQVVPGIGHDGQ------AMSQVCASLWFDGR 288 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCEEEEETTCCSCHH------HHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEEEeCCCCCchH------HHHHHHHHHHhhhh
Confidence 245566777776 66776 99999999999873 44566777776543
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.4e-19 Score=156.31 Aligned_cols=197 Identities=13% Similarity=0.088 Sum_probs=137.8
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeC
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 303 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 303 (494)
.+...++ .+|.++.+++|.|.+ +.|+||++||.+.. ...|... .....|+++||.|+.+
T Consensus 4 ~~~~~~~-~~g~~l~~~~~~~~~-------~~~~vv~~hG~~~~-----------~~~~~~~--~~~~~l~~~G~~v~~~ 62 (207)
T 3bdi_A 4 LQEEFID-VNGTRVFQRKMVTDS-------NRRSIALFHGYSFT-----------SMDWDKA--DLFNNYSKIGYNVYAP 62 (207)
T ss_dssp CEEEEEE-ETTEEEEEEEECCTT-------CCEEEEEECCTTCC-----------GGGGGGG--THHHHHHTTTEEEEEE
T ss_pred ceeEEEe-eCCcEEEEEEEeccC-------CCCeEEEECCCCCC-----------ccccchH--HHHHHHHhCCCeEEEE
Confidence 3343444 588999999999875 26899999997522 1122210 1456788999999997
Q ss_pred CCCCCCCCCCC---CCCc-h--hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCC
Q 011049 304 PSIPIIGEGDK---LPND-R--FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 377 (494)
Q Consensus 304 ~~~~~~g~g~~---~~~~-~--~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 377 (494)
+.++ +|.+ .... . ...+..+ .+..+++. .+.++++++|||+||.+++.++.++|++++++++.+|
T Consensus 63 d~~g---~g~s~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~ 133 (207)
T 3bdi_A 63 DYPG---FGRSASSEKYGIDRGDLKHAAE----FIRDYLKA--NGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAP 133 (207)
T ss_dssp CCTT---STTSCCCTTTCCTTCCHHHHHH----HHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESC
T ss_pred cCCc---ccccCcccCCCCCcchHHHHHH----HHHHHHHH--cCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCC
Confidence 7653 4443 2211 1 2233333 34444443 2347899999999999999999999999999999998
Q ss_pred CCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 011049 378 SYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPF 457 (494)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 457 (494)
..... + ...+.++++|+|+++|++|..++ ...++.+.+.+ .++++.++++
T Consensus 134 ~~~~~-----~-------------------~~~~~~~~~p~l~i~g~~D~~~~--~~~~~~~~~~~----~~~~~~~~~~ 183 (207)
T 3bdi_A 134 AWVES-----L-------------------KGDMKKIRQKTLLVWGSKDHVVP--IALSKEYASII----SGSRLEIVEG 183 (207)
T ss_dssp CSCGG-----G-------------------HHHHTTCCSCEEEEEETTCTTTT--HHHHHHHHHHS----TTCEEEEETT
T ss_pred ccccc-----h-------------------hHHHhhccCCEEEEEECCCCccc--hHHHHHHHHhc----CCceEEEeCC
Confidence 52110 0 22345678999999999999988 88887777766 3468999999
Q ss_pred CCCccCCcccHHHHHHHHHHHHHH
Q 011049 458 EHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 458 ~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
++|.+.. +....+.+.+.+||++
T Consensus 184 ~~H~~~~-~~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 184 SGHPVYI-EKPEEFVRITVDFLRN 206 (207)
T ss_dssp CCSCHHH-HSHHHHHHHHHHHHHT
T ss_pred CCCCccc-cCHHHHHHHHHHHHhh
Confidence 9998653 4456677788888864
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.9e-20 Score=185.56 Aligned_cols=250 Identities=13% Similarity=0.133 Sum_probs=162.2
Q ss_pred cccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcc------cCC--CCccCCCCchhHHHH
Q 011049 222 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQV------RGS--PNEFSGMTPTSSLIF 293 (494)
Q Consensus 222 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~l 293 (494)
+..+.+.+++.||.+|.+++|+|++ .+++|+||+.||-+.........+ .+. ...+..+....++.|
T Consensus 39 ~~~~~v~i~~~DG~~L~a~l~~P~~-----~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~l 113 (560)
T 3iii_A 39 IMEKDGTVEMRDGEKLYINIFRPNK-----DGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFW 113 (560)
T ss_dssp EEEEEEEEECTTSCEEEEEEEECSS-----SSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHH
T ss_pred EEEEEEEEECCCCcEEEEEEEecCC-----CCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHH
Confidence 3467899999999999999999986 245999999997543211000000 000 000111111235689
Q ss_pred HhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEE
Q 011049 294 LARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGI 373 (494)
Q Consensus 294 ~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v 373 (494)
+++||+|+.+|.||..+++.... .+.....+|+.++++||.+++++| .||+++|+||||++++.+|+..|+.++|+|
T Consensus 114 a~~Gy~vv~~D~RG~G~S~G~~~--~~~~~~~~D~~~~i~~l~~~~~~~-~~igl~G~S~GG~~al~~a~~~p~~l~aiv 190 (560)
T 3iii_A 114 VPNDYVVVKVALRGSDKSKGVLS--PWSKREAEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWWVASLNPPHLKAMI 190 (560)
T ss_dssp GGGTCEEEEEECTTSTTCCSCBC--TTSHHHHHHHHHHHHHHHTSTTEE-EEEEEEEETHHHHHHHHHHTTCCTTEEEEE
T ss_pred HhCCCEEEEEcCCCCCCCCCccc--cCChhHHHHHHHHHHHHHhCCCCC-CcEEEEccCHHHHHHHHHHhcCCCceEEEE
Confidence 99999999988876654443322 233467899999999999998877 899999999999999999999999999999
Q ss_pred eCCCCCCCCC---CCCCcccc-ccccc--------c-----------------cHHHHHhcCccccccCCCCCEEEEecC
Q 011049 374 ARSGSYNKTL---TPFGFQTE-FRTLW--------E-----------------ATNVYIEMSPITHANKIKKPILIIHGE 424 (494)
Q Consensus 374 ~~~~~~~~~~---~~~~~~~~-~~~~~--------~-----------------~~~~~~~~sp~~~~~~~~~P~li~~G~ 424 (494)
+.+|+.|... ..-+.... ....| . ..+.|...++ .+++|++|+|+++|.
T Consensus 191 ~~~~~~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~hp~~d~~W~~~~~--~~~~I~vPvl~v~Gw 268 (560)
T 3iii_A 191 PWEGLNDMYREVAFHGGIPDTGFYRFWTQGIFARWTDNPNIEDLIQAQQEHPLFDDFWKQRQV--PLSQIKTPLLTCASW 268 (560)
T ss_dssp EESCCCBHHHHTTEETTEECCSHHHHHHHHHHHHTTTCTTBCCHHHHHHHCCSSCHHHHTTBC--CGGGCCSCEEEEEEG
T ss_pred ecCCcccccccceecCCCCchhHHHHHHhhhccccccccchHHHHHHHHHCCCcchHhhccCC--chhhCCCCEEEeCCc
Confidence 9999887321 00000000 00000 0 0012333444 678999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCCCCC
Q 011049 425 VDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNTS 488 (494)
Q Consensus 425 ~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 488 (494)
.|..+. ...+.+.+++|+..++ .+.+-+ .+|+.. .......+.+++||++||++...
T Consensus 269 ~D~~~~--~~g~l~~y~~l~~~~k--~l~ih~-~~~~~~--~~~~~~~~~~~~wfD~~LkG~~n 325 (560)
T 3iii_A 269 STQGLH--NRGSFEGFKQAASEEK--WLYVHG-RKEWES--YYARENLERQKSFFDFYLKEENN 325 (560)
T ss_dssp GGTTTT--HHHHHHHHHHCCCSSE--EEEEES-SCHHHH--HHSHHHHHHHHHHHHHHTSCCCC
T ss_pred CCCccc--chhHHHHHHhccccCc--EEEECC-CCCcCc--ccChhHHHHHHHHHHHHhCCCCC
Confidence 998554 6677777777765432 333322 122210 00124567789999999997643
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.83 E-value=3e-20 Score=189.00 Aligned_cols=238 Identities=18% Similarity=0.174 Sum_probs=164.3
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhH-HHHHhCCeEEEe
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSS-LIFLARRFAVLA 302 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~G~~v~~ 302 (494)
.+.+++++.||.+|.+.+|.|++ .+++|+||+.||.+..... ...+. ..+ ..|+++||+|+.
T Consensus 9 ~~~v~i~~~DG~~L~~~~~~P~~-----~~~~P~vv~~~~~g~~~~~--------~~~y~----~~~~~~la~~Gy~vv~ 71 (587)
T 3i2k_A 9 ASNVMVPMRDGVRLAVDLYRPDA-----DGPVPVLLVRNPYDKFDVF--------AWSTQ----STNWLEFVRDGYAVVI 71 (587)
T ss_dssp EEEEEEECTTSCEEEEEEEEECC-----SSCEEEEEEEESSCTTCHH--------HHHTT----TCCTHHHHHTTCEEEE
T ss_pred EEEEEEECCCCCEEEEEEEECCC-----CCCeeEEEEECCcCCCccc--------cccch----hhHHHHHHHCCCEEEE
Confidence 56789999999999999999985 2348999999874321100 00011 123 688999999999
Q ss_pred CCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC-CCC
Q 011049 303 GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS-YNK 381 (494)
Q Consensus 303 ~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~-~~~ 381 (494)
+|.||..+.+..... .....+|+.++++||.++.+.+ .||+++|+||||++++.+++.+|+.++|+|+.++. .+.
T Consensus 72 ~D~RG~G~S~g~~~~---~~~~~~D~~~~i~~l~~~~~~~-~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~ 147 (587)
T 3i2k_A 72 QDTRGLFASEGEFVP---HVDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLY 147 (587)
T ss_dssp EECTTSTTCCSCCCT---TTTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTC
T ss_pred EcCCCCCCCCCcccc---ccchhHHHHHHHHHHHhCCCCC-CeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCccccc
Confidence 888765444333222 2346889999999999987766 79999999999999999999999999999999998 664
Q ss_pred CCCC---CCcccc-cc------------------------------------------cc----------------c--c
Q 011049 382 TLTP---FGFQTE-FR------------------------------------------TL----------------W--E 397 (494)
Q Consensus 382 ~~~~---~~~~~~-~~------------------------------------------~~----------------~--~ 397 (494)
.... .+.... .. .+ | .
T Consensus 148 ~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (587)
T 3i2k_A 148 RAPWYGPGGALSVEALLGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVD 227 (587)
T ss_dssp CCCCSCTTCCCCHHHHHHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHHHTCHHHHHTCSSTTCCHHHHHHCTHHHHTTTT
T ss_pred ccceeecCCccccchHHHHHHHhhhhcccccccCCccchhhhhhhhhhhhHHHHHHhcCCcccchhccccchhHHhhhhc
Confidence 3211 000000 00 00 0 0
Q ss_pred ---cHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCC---------c
Q 011049 398 ---ATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA---------R 465 (494)
Q Consensus 398 ---~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~---------~ 465 (494)
..+.|...++...+++|++|+|+++|..|..+ ..+.+++++|+..++ ..+++-|. .|.... .
T Consensus 228 ~~~~d~yw~~~s~~~~l~~I~vPvL~v~Gw~D~~~----~~~~~~~~~l~~~~~-~~L~iGPw-~H~~~~~~~g~~~~g~ 301 (587)
T 3i2k_A 228 HPDNDESWQSISLFERLGGLATPALITAGWYDGFV----GESLRTFVAVKDNAD-ARLVVGPW-SHSNLTGRNADRKFGI 301 (587)
T ss_dssp CCSCCHHHHTTCCHHHHTTCCCCEEEEEEEECTTH----HHHHHHHHHHTTTSC-EEEEEEEE-ETTBCSSEETTEECCG
T ss_pred CCCCChHHhcCChhhhhccCCCCEEEEccCCCccc----hHHHHHHHHHhhcCC-CEEEECCc-cccCccccCCCcccCC
Confidence 01234455666778999999999999999864 457889999988765 36666665 465311 1
Q ss_pred ccHH---HHHHHHHHHHHHhcCCCCC
Q 011049 466 ENVM---HVIWETDRWLQKYCLSNTS 488 (494)
Q Consensus 466 ~~~~---~~~~~~~~fl~~~l~~~~~ 488 (494)
.... +..+.+++||++||++...
T Consensus 302 ~~~~~~~~~~~~~~~wFD~~Lkg~~n 327 (587)
T 3i2k_A 302 AATYPIQEATTMHKAFFDRHLRGETD 327 (587)
T ss_dssp GGSCCHHHHHHHHHHHHHHHHSCCTT
T ss_pred ccccccchhhHHHHHHHHHHhcCCCC
Confidence 1111 3348899999999997643
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.83 E-value=4.4e-19 Score=158.84 Aligned_cols=181 Identities=17% Similarity=0.128 Sum_probs=133.5
Q ss_pred CCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCC---------CchhHHHH
Q 011049 254 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP---------NDRFVEQL 324 (494)
Q Consensus 254 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~---------~~~~~~~~ 324 (494)
+.|+||++||.+. +...| ......|+. ||.|++++. +..|+|.+.. ........
T Consensus 37 ~~~~vv~~HG~~~-----------~~~~~----~~~~~~l~~-g~~v~~~~~-d~~g~g~s~~~~~~~~~~~~~~~~~~~ 99 (226)
T 2h1i_A 37 SKPVLLLLHGTGG-----------NELDL----LPLAEIVDS-EASVLSVRG-NVLENGMPRFFRRLAEGIFDEEDLIFR 99 (226)
T ss_dssp TSCEEEEECCTTC-----------CTTTT----HHHHHHHHT-TSCEEEECC-SEEETTEEESSCEEETTEECHHHHHHH
T ss_pred CCcEEEEEecCCC-----------ChhHH----HHHHHHhcc-CceEEEecC-cccCCcchhhccccCccCcChhhHHHH
Confidence 3799999999752 11112 233445555 999998632 2334443210 11122334
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHh
Q 011049 325 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIE 404 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (494)
+.++.+.++++.++..+++++++++|||+||++++.++..+|++++++|+++|......
T Consensus 100 ~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~--------------------- 158 (226)
T 2h1i_A 100 TKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG--------------------- 158 (226)
T ss_dssp HHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS---------------------
T ss_pred HHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc---------------------
Confidence 56677777777777767889999999999999999999999999999999999754211
Q ss_pred cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 405 MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 405 ~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
......+++|+|+++|++|..+| ...++.+++.+++.+.++++ ++++++|.+. .+....+.+||.++|
T Consensus 159 ---~~~~~~~~~p~l~~~G~~D~~~~--~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~-----~~~~~~~~~~l~~~l 226 (226)
T 2h1i_A 159 ---MQLANLAGKSVFIAAGTNDPICS--SAESEELKVLLENANANVTM-HWENRGHQLT-----MGEVEKAKEWYDKAF 226 (226)
T ss_dssp ---CCCCCCTTCEEEEEEESSCSSSC--HHHHHHHHHHHHTTTCEEEE-EEESSTTSCC-----HHHHHHHHHHHHHHC
T ss_pred ---cccccccCCcEEEEeCCCCCcCC--HHHHHHHHHHHHhcCCeEEE-EeCCCCCCCC-----HHHHHHHHHHHHHhC
Confidence 11123347999999999999998 99999999999998888998 9999999874 255678899998875
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.83 E-value=2.6e-19 Score=159.99 Aligned_cols=197 Identities=15% Similarity=0.126 Sum_probs=138.8
Q ss_pred CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCC
Q 011049 233 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 312 (494)
Q Consensus 233 dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g 312 (494)
++..+...++.|.. .+.|+||++||.+.. ...|. .....|+ .||.|+.++..+..+.|
T Consensus 14 ~~~~l~~~~~~~~~------~~~p~vv~lHG~g~~-----------~~~~~----~~~~~l~-~~~~vv~~d~~~~~~~g 71 (223)
T 3b5e_A 14 TDLAFPYRLLGAGK------ESRECLFLLHGSGVD-----------ETTLV----PLARRIA-PTATLVAARGRIPQEDG 71 (223)
T ss_dssp CSSSSCEEEESTTS------SCCCEEEEECCTTBC-----------TTTTH----HHHHHHC-TTSEEEEECCSEEETTE
T ss_pred cCCCceEEEeCCCC------CCCCEEEEEecCCCC-----------HHHHH----HHHHhcC-CCceEEEeCCCCCcCCc
Confidence 44566666555532 124899999997521 11121 2333444 49999997743211101
Q ss_pred CCC--------CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC
Q 011049 313 DKL--------PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT 384 (494)
Q Consensus 313 ~~~--------~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~ 384 (494)
..+ ..........+++.+.++++.++..+|+++++++|||+||.+++.++.++|++++++|+++|.......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~ 151 (223)
T 3b5e_A 72 FRWFERIDPTRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDHV 151 (223)
T ss_dssp EESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSSC
T ss_pred cccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCcccc
Confidence 111 112234456778888888888775578899999999999999999999999999999999986542100
Q ss_pred CCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCC
Q 011049 385 PFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA 464 (494)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~ 464 (494)
.....+++|+|++||++|..+| ..+++ +++.|++.+.++++++++ .+|.+..
T Consensus 152 ------------------------~~~~~~~~P~li~~G~~D~~v~--~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~~ 203 (223)
T 3b5e_A 152 ------------------------PATDLAGIRTLIIAGAADETYG--PFVPA-LVTLLSRHGAEVDARIIP-SGHDIGD 203 (223)
T ss_dssp ------------------------CCCCCTTCEEEEEEETTCTTTG--GGHHH-HHHHHHHTTCEEEEEEES-CCSCCCH
T ss_pred ------------------------ccccccCCCEEEEeCCCCCcCC--HHHHH-HHHHHHHCCCceEEEEec-CCCCcCH
Confidence 1223457899999999999998 89999 999999999999999999 9998752
Q ss_pred cccHHHHHHHHHHHHHHhcC
Q 011049 465 RENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 465 ~~~~~~~~~~~~~fl~~~l~ 484 (494)
+..+.+.+||.+.+.
T Consensus 204 -----~~~~~i~~~l~~~~~ 218 (223)
T 3b5e_A 204 -----PDAAIVRQWLAGPIA 218 (223)
T ss_dssp -----HHHHHHHHHHHCC--
T ss_pred -----HHHHHHHHHHHhhhh
Confidence 345678899987654
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.5e-19 Score=166.74 Aligned_cols=227 Identities=14% Similarity=0.162 Sum_probs=146.1
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEe
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 302 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 302 (494)
..+.+++.+ +|..+....+.+... ++..|+||++||.+.+ ...| ......|+++||.|++
T Consensus 19 ~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~p~vv~~hG~~~~-----------~~~~----~~~~~~l~~~g~~v~~ 78 (315)
T 4f0j_A 19 PVHYLDFTS-QGQPLSMAYLDVAPK----KANGRTILLMHGKNFC-----------AGTW----ERTIDVLADAGYRVIA 78 (315)
T ss_dssp CCEEEEEEE-TTEEEEEEEEEECCS----SCCSCEEEEECCTTCC-----------GGGG----HHHHHHHHHTTCEEEE
T ss_pred cceeEEEec-CCCCeeEEEeecCCC----CCCCCeEEEEcCCCCc-----------chHH----HHHHHHHHHCCCeEEE
Confidence 567777874 666666665554321 2236999999997521 1112 2345678889999999
Q ss_pred CCCCCCCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC
Q 011049 303 GPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 379 (494)
Q Consensus 303 ~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 379 (494)
++.+ |+|.+... ....++..+|+.++++.+ +.+++.++|||+||++++.++.++|++++++|+.+|..
T Consensus 79 ~d~~---G~G~s~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 149 (315)
T 4f0j_A 79 VDQV---GFCKSSKPAHYQYSFQQLAANTHALLERL------GVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIG 149 (315)
T ss_dssp ECCT---TSTTSCCCSSCCCCHHHHHHHHHHHHHHT------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSC
T ss_pred eecC---CCCCCCCCCccccCHHHHHHHHHHHHHHh------CCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcc
Confidence 7665 44544322 223445555555554442 34689999999999999999999999999999999864
Q ss_pred CCCC----CCCC-ccc----c----------------cccccc----------------------------cHHHHHhcC
Q 011049 380 NKTL----TPFG-FQT----E----------------FRTLWE----------------------------ATNVYIEMS 406 (494)
Q Consensus 380 ~~~~----~~~~-~~~----~----------------~~~~~~----------------------------~~~~~~~~s 406 (494)
.... .... ... . ....+. ........+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (315)
T 4f0j_A 150 LEDWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQP 229 (315)
T ss_dssp SSCHHHHTCCCCCHHHHHHHHTTCCHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCC
T ss_pred cCCcccccchhhhhHHHHhhcccCChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccch
Confidence 2110 0000 000 0 000000 001112233
Q ss_pred ccccccCCCCCEEEEecCCCCCCCCCHHHH------------HHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHH
Q 011049 407 PITHANKIKKPILIIHGEVDDKVGLFPMQA------------ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWE 474 (494)
Q Consensus 407 p~~~~~~~~~P~li~~G~~D~~v~~~~~~~------------~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~ 474 (494)
....+.++++|+|+++|++|..+| ..+. .+..+.+.+...+++++++++++|.+. .++...+.+.
T Consensus 230 ~~~~l~~~~~P~lii~G~~D~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~p~~~~~~ 306 (315)
T 4f0j_A 230 VVYELDRLQMPTLLLIGEKDNTAI--GKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLGHTPQ-IQAPERFHQA 306 (315)
T ss_dssp CGGGGGGCCSCEEEEEETTCCCCT--TGGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEETTCCSCHH-HHSHHHHHHH
T ss_pred hhhhcccCCCCeEEEEecCCCcCc--cccccccccccccccchhhhhHHHhhcCCceEEEeCCCCcchh-hhCHHHHHHH
Confidence 445678899999999999999986 5443 456666666666789999999999865 3566677888
Q ss_pred HHHHHHH
Q 011049 475 TDRWLQK 481 (494)
Q Consensus 475 ~~~fl~~ 481 (494)
+.+||++
T Consensus 307 i~~fl~~ 313 (315)
T 4f0j_A 307 LLEGLQT 313 (315)
T ss_dssp HHHHHCC
T ss_pred HHHHhcc
Confidence 8888864
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.82 E-value=1e-18 Score=163.60 Aligned_cols=232 Identities=12% Similarity=0.049 Sum_probs=144.9
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeC
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 303 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 303 (494)
.+...+++.||.++.++.+.|.+..+ .+.|+||++||.+.+ ...| ...+..|+++||.|+++
T Consensus 7 ~~~~~i~~~dG~~l~~~~~~p~~~~~---~~~~~VvllHG~g~~-----------~~~~----~~~~~~L~~~G~~Vi~~ 68 (305)
T 1tht_A 7 TIAHVLRVNNGQELHVWETPPKENVP---FKNNTILIASGFARR-----------MDHF----AGLAEYLSTNGFHVFRY 68 (305)
T ss_dssp CEEEEEEETTTEEEEEEEECCCTTSC---CCSCEEEEECTTCGG-----------GGGG----HHHHHHHHTTTCCEEEE
T ss_pred ceEEEEEcCCCCEEEEEEecCcccCC---CCCCEEEEecCCccC-----------chHH----HHHHHHHHHCCCEEEEe
Confidence 45667788899999999998764211 125899999996421 1112 23556778899999997
Q ss_pred CCCCCCCCCCCCC--CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCC
Q 011049 304 PSIPIIGEGDKLP--NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 381 (494)
Q Consensus 304 ~~~~~~g~g~~~~--~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~ 381 (494)
|.+|.. |.+.. .....+...+|+.++++++.+.+ .++++++||||||.+++.++.+ | +++++|+.++..+.
T Consensus 69 D~rGh~--G~S~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~ 141 (305)
T 1tht_A 69 DSLHHV--GLSSGSIDEFTMTTGKNSLCTVYHWLQTKG---TQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNL 141 (305)
T ss_dssp CCCBCC----------CCCHHHHHHHHHHHHHHHHHTT---CCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCH
T ss_pred eCCCCC--CCCCCcccceehHHHHHHHHHHHHHHHhCC---CCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhH
Confidence 765432 44322 11124566789999999997544 3789999999999999999988 7 78898887775431
Q ss_pred CC-----CCCCc--------ccccc--cccccHHHH----Hhc------CccccccCCCCCEEEEecCCCCCCCCCHHHH
Q 011049 382 TL-----TPFGF--------QTEFR--TLWEATNVY----IEM------SPITHANKIKKPILIIHGEVDDKVGLFPMQA 436 (494)
Q Consensus 382 ~~-----~~~~~--------~~~~~--~~~~~~~~~----~~~------sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~ 436 (494)
.. ....+ ..... ........+ ... +....+.++++|+|+++|++|..+| +..+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp--~~~~ 219 (305)
T 1tht_A 142 RDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVK--QEEV 219 (305)
T ss_dssp HHHHHHHHSSCGGGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSC--HHHH
T ss_pred HHHHHHHhhhhhhhcchhhCcccccccccccCHHHHHHHHHhccccchhhHHHHHhhcCCCEEEEEeCCCCccC--HHHH
Confidence 00 00000 00000 000001111 111 1234567899999999999999998 8877
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCccCCccc-HHHHHHHHHHHHHHhcC
Q 011049 437 ERFFDALKGHGALSRLVLLPFEHHVYAAREN-VMHVIWETDRWLQKYCL 484 (494)
Q Consensus 437 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~-~~~~~~~~~~fl~~~l~ 484 (494)
+++++.+.. .+++++++++++|.+...+. ...++..+.+|......
T Consensus 220 ~~l~~~i~~--~~~~l~~i~~agH~~~e~p~~~~~fl~~~~~~~~~~~~ 266 (305)
T 1tht_A 220 YDMLAHIRT--GHCKLYSLLGSSHDLGENLVVLRNFYQSVTKAAIAMDG 266 (305)
T ss_dssp HHHHTTCTT--CCEEEEEETTCCSCTTSSHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhcCC--CCcEEEEeCCCCCchhhCchHHHHHHHHHHHHHHHhCc
Confidence 766655432 34799999999999752111 22455556666554443
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.2e-18 Score=164.95 Aligned_cols=249 Identities=13% Similarity=0.114 Sum_probs=156.3
Q ss_pred ccccEEEEEEcCC--C--ceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHH-h
Q 011049 221 SLQKEMIKYQRKD--G--VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-A 295 (494)
Q Consensus 221 ~~~~~~~~~~~~d--g--~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~ 295 (494)
..+..+|.|.+.| | ..+.+++++|.+. +++.|+|++.||.... .. +.+.............|+ +
T Consensus 40 ~~~~~~i~Y~s~d~~G~~~~~~g~l~~P~~~----~~~~PvV~~~HG~~~~--~~-----~~ps~~~~~~~~~~~~lal~ 108 (377)
T 4ezi_A 40 DLQLYKINYKTQSPDGNLTIASGLVAMPIHP----VGQVGIISYQHGTRFE--RN-----DVPSRNNEKNYIYLAAYGNS 108 (377)
T ss_dssp CEEEEEEEEEEECTTSCEEEEEEEEEEESSC----SSCEEEEEEECCCCCS--TT-----CSGGGCCGGGHHHHHHHTTT
T ss_pred CcEEEEEEEEEECCCCCEEEEEEEEEECCCC----CCCCcEEEEeCCCcCC--cc-----cCCCcCcccchHHHHHHHHh
Confidence 3467788888876 4 4588999999873 2458999999997521 10 111000000112344678 9
Q ss_pred CCeEEEeCCCCCCCCCCCCCCC---chhHHHHHHHHHHHHHHHHH-cCCCCCCcEEEEecChHHHHHHHHHHhCCC----
Q 011049 296 RRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVR-RGVADPSRIAVGGHSYGAFMTAHLLAHAPH---- 367 (494)
Q Consensus 296 ~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~-~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~---- 367 (494)
+||+|+.+|++|..+.+..... .......+.|...++..+.+ .+..+.+||+++|||+||+++++++...|+
T Consensus 109 ~Gy~Vv~~D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~ 188 (377)
T 4ezi_A 109 AGYMTVMPDYLGLGDNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPD 188 (377)
T ss_dssp TCCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTT
T ss_pred CCcEEEEeCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCC
Confidence 9999999888765333321111 11112223444444444433 354467899999999999999999887543
Q ss_pred -ceeEEEeCCCCCCCCC-------CC--C-----Cc--------cccc-------cc-----------------------
Q 011049 368 -LFCCGIARSGSYNKTL-------TP--F-----GF--------QTEF-------RT----------------------- 394 (494)
Q Consensus 368 -~~~a~v~~~~~~~~~~-------~~--~-----~~--------~~~~-------~~----------------------- 394 (494)
.++++++.+++.|... .. . ++ .... ..
T Consensus 189 l~l~g~~~~~~p~dl~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (377)
T 4ezi_A 189 LPVSAVAPGSAPYGWEETMHFVMLEPGPRATAYLAYFFYSLQTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEILQAL 268 (377)
T ss_dssp SCCCEEEEESCCCCHHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHHHHS
T ss_pred CceEEEEecCcccCHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhhhhcc
Confidence 5889999888766210 00 0 00 0000 00
Q ss_pred -----ccccHHH---HH-hcCc-cc--------cccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcC
Q 011049 395 -----LWEATNV---YI-EMSP-IT--------HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLP 456 (494)
Q Consensus 395 -----~~~~~~~---~~-~~sp-~~--------~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~ 456 (494)
.+-.+.. +. ..+| +. .-.++++|+|++||++|..|| +.++.++++++++.|. +++++|+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~Pvli~hG~~D~~Vp--~~~~~~l~~~l~~~G~-v~~~~~~ 345 (377)
T 4ezi_A 269 PQDPLLIFQPKFSNGIISKTDRNTEILKINFNHYDFKPTAPLLLVGTKGDRDVP--YAGAEMAYHSFRKYSD-FVWIKSV 345 (377)
T ss_dssp CSSGGGGBCHHHHHHHHTTCSTTHHHHHHHHCCCCSCCSSCEEEEECTTCSSSC--HHHHHHHHHHHHTTCS-CEEEEES
T ss_pred CCCHHHHhchhhhhhcccccchHHHHHHHHhcccCCCCCCCEEEEecCCCCCCC--HHHHHHHHHHHHhcCC-EEEEEcC
Confidence 0000000 00 0122 10 012467999999999999998 9999999999999999 9999999
Q ss_pred C--CCCccCCcccHHHHHHHHHHHHHHhcCCCC
Q 011049 457 F--EHHVYAARENVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 457 ~--~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~ 487 (494)
+ .+|... .......+++||++++.++.
T Consensus 346 ~~~~~H~~~----~~~~~~~~~~wl~~~~~~~~ 374 (377)
T 4ezi_A 346 SDALDHVQA----HPFVLKEQVDFFKQFERQEA 374 (377)
T ss_dssp CSSCCTTTT----HHHHHHHHHHHHHHHHTSSC
T ss_pred CCCCCccCh----HHHHHHHHHHHHHHhhcchh
Confidence 9 899754 34667889999999998654
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.4e-20 Score=170.53 Aligned_cols=226 Identities=13% Similarity=0.078 Sum_probs=143.8
Q ss_pred cccEEEEEEcC-CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCC---
Q 011049 222 LQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR--- 297 (494)
Q Consensus 222 ~~~~~~~~~~~-dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--- 297 (494)
...+.+++.+. +|.++.+++|+|+++++.+ ++|+|+++||+++.. ....+. .......++.|
T Consensus 16 ~~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~--~~Pvl~~lhG~~~~~---------~~~~~~---~~~~~~~~~~g~~~ 81 (275)
T 2qm0_A 16 SNTEQWKMYSKLEGKEYQIHISKPKQPAPDS--GYPVIYVLDGNAFFQ---------TFHEAV---KIQSVRAEKTGVSP 81 (275)
T ss_dssp TTEEEEEEECTTTCCEEEEEEECCSSCCCTT--CEEEEEEESHHHHHH---------HHHHHH---HHHGGGHHHHCCCC
T ss_pred CCceEEEEEecCCCCEEEEEEECCCCCCCCC--CccEEEEecChHHHH---------HHHHHH---HHHhhcchhcCCCC
Confidence 35778889886 7899999999999987654 499999999975210 000000 00000113457
Q ss_pred eEEEeCCCCCCCC---------CCCCC--------------CCchhHHHHHHHH-HHHHHHHHHcCCCCCCcEEEEecCh
Q 011049 298 FAVLAGPSIPIIG---------EGDKL--------------PNDRFVEQLVSSA-EAAVEEVVRRGVADPSRIAVGGHSY 353 (494)
Q Consensus 298 ~~v~~~~~~~~~g---------~g~~~--------------~~~~~~~~~~~d~-~~~v~~l~~~~~~d~~ri~i~G~S~ 353 (494)
++|+.+++++... ++... ..........+.+ .+.+.++.++..+|+++++|+|||+
T Consensus 82 ~ivV~i~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~ 161 (275)
T 2qm0_A 82 AIIVGVGYPIEGAFSGEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXL 161 (275)
T ss_dssp CEEEEEECSCSSSCCHHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETH
T ss_pred eEEEEECCCCCCcCcccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecc
Confidence 9999866654211 11000 0000001111112 2345566666668889999999999
Q ss_pred HHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCH
Q 011049 354 GAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFP 433 (494)
Q Consensus 354 GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~ 433 (494)
||++++.++.++|++|+++++.+|...+. .. ......+.+.... ......+|++++||+.|..++ .
T Consensus 162 GG~~a~~~~~~~p~~f~~~~~~s~~~~~~-------~~--~~~~~~~~~~~~~---~~~~~~~~~~l~~G~~D~~~~--~ 227 (275)
T 2qm0_A 162 GGLFALHILFTNLNAFQNYFISSPSIWWN-------NK--SVLEKEENLIIEL---NNAKFETGVFLTVGSLEREHM--V 227 (275)
T ss_dssp HHHHHHHHHHHCGGGCSEEEEESCCTTHH-------HH--GGGGGTTHHHHHH---HTCSSCEEEEEEEETTSCHHH--H
T ss_pred hhHHHHHHHHhCchhhceeEEeCceeeeC-------hH--HHHHHHHHHHhhh---cccCCCceEEEEeCCcccchh--h
Confidence 99999999999999999999999974310 00 0000111111110 023456899999999999876 8
Q ss_pred HHHHHHHHHH---HhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 434 MQAERFFDAL---KGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 434 ~~~~~~~~~l---~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
.++++++++| ++.|+++++.++|+++|+.. ....+...++||
T Consensus 228 ~~~~~~~~~L~~~~~~g~~~~~~~~~g~~H~~~----~~~~l~~~l~~l 272 (275)
T 2qm0_A 228 VGANELSERLLQVNHDKLKFKFYEAEGENHASV----VPTSLSKGLRFI 272 (275)
T ss_dssp HHHHHHHHHHHHCCCTTEEEEEEEETTCCTTTH----HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCCceEEEEECCCCCcccc----HHHHHHHHHHHH
Confidence 9999999999 56788999999999999643 223344555665
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.81 E-value=4.1e-19 Score=161.85 Aligned_cols=180 Identities=16% Similarity=0.112 Sum_probs=129.4
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCC---------CCchhHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL---------PNDRFVEQLV 325 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~---------~~~~~~~~~~ 325 (494)
.|+||++||.+.. ...|. .....|+ .+|.|++++. +..|.|.+. .........+
T Consensus 62 ~p~vv~~HG~~~~-----------~~~~~----~~~~~l~-~~~~v~~~~~-d~~g~g~s~~~~~~~~~~~~~~~~~~~~ 124 (251)
T 2r8b_A 62 APLFVLLHGTGGD-----------ENQFF----DFGARLL-PQATILSPVG-DVSEHGAARFFRRTGEGVYDMVDLERAT 124 (251)
T ss_dssp SCEEEEECCTTCC-----------HHHHH----HHHHHHS-TTSEEEEECC-SEEETTEEESSCBCGGGCBCHHHHHHHH
T ss_pred CcEEEEEeCCCCC-----------HhHHH----HHHHhcC-CCceEEEecC-CcCCCCCcccccCCCCCcCCHHHHHHHH
Confidence 7999999997521 11121 2233444 4699999632 233343221 1112234457
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhc
Q 011049 326 SSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEM 405 (494)
Q Consensus 326 ~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (494)
+|+.++++++.++. +.++++|+|||+||++++.++.++|++++++|+++|..+...
T Consensus 125 ~~~~~~l~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~---------------------- 180 (251)
T 2r8b_A 125 GKMADFIKANREHY--QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP---------------------- 180 (251)
T ss_dssp HHHHHHHHHHHHHH--TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC----------------------
T ss_pred HHHHHHHHHHHhcc--CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc----------------------
Confidence 88888888887764 678999999999999999999999999999999999754311
Q ss_pred CccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 406 SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 406 sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
......+++|+|+++|++|..+| ..+++++++.|++.+.++++ ++++++|.+.. +..+.+.+||.++|++
T Consensus 181 --~~~~~~~~~P~li~~g~~D~~~~--~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~~-----~~~~~~~~~l~~~l~~ 250 (251)
T 2r8b_A 181 --KISPAKPTRRVLITAGERDPICP--VQLTKALEESLKAQGGTVET-VWHPGGHEIRS-----GEIDAVRGFLAAYGGG 250 (251)
T ss_dssp --CCCCCCTTCEEEEEEETTCTTSC--HHHHHHHHHHHHHHSSEEEE-EEESSCSSCCH-----HHHHHHHHHHGGGC--
T ss_pred --cccccccCCcEEEeccCCCccCC--HHHHHHHHHHHHHcCCeEEE-EecCCCCccCH-----HHHHHHHHHHHHhcCC
Confidence 01223457899999999999998 99999999999987887777 56677998742 4467889999998864
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.81 E-value=7.4e-19 Score=161.80 Aligned_cols=202 Identities=17% Similarity=0.160 Sum_probs=140.6
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC--chhHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAV 332 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~v 332 (494)
.|+||++||.+.. ...| ......|+++||.|+.++.+ |+|.+... .......++|+.+++
T Consensus 40 ~~~vv~~HG~~~~-----------~~~~----~~~~~~l~~~G~~v~~~d~~---G~G~s~~~~~~~~~~~~~~d~~~~i 101 (270)
T 3rm3_A 40 PVGVLLVHGFTGT-----------PHSM----RPLAEAYAKAGYTVCLPRLK---GHGTHYEDMERTTFHDWVASVEEGY 101 (270)
T ss_dssp SEEEEEECCTTCC-----------GGGT----HHHHHHHHHTTCEEEECCCT---TCSSCHHHHHTCCHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCC-----------hhHH----HHHHHHHHHCCCEEEEeCCC---CCCCCccccccCCHHHHHHHHHHHH
Confidence 5899999996521 1112 24566788899999996664 55555321 123456688999999
Q ss_pred HHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC-----C----CCccccc-----------
Q 011049 333 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT-----P----FGFQTEF----------- 392 (494)
Q Consensus 333 ~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~-----~----~~~~~~~----------- 392 (494)
+++.++ .++++++|||+||++++.++.++|+ ++++|+++|....... . ..+....
T Consensus 102 ~~l~~~----~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (270)
T 3rm3_A 102 GWLKQR----CQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKE 176 (270)
T ss_dssp HHHHTT----CSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC---CCSEEECCCCCCSCTTCCC
T ss_pred HHHHhh----CCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcchhHHHHHHHhCccccccchHh
Confidence 999776 4789999999999999999999999 9999999986542100 0 0000000
Q ss_pred ----ccccccHHHHH--hcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcc
Q 011049 393 ----RTLWEATNVYI--EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE 466 (494)
Q Consensus 393 ----~~~~~~~~~~~--~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~ 466 (494)
..+......+. ..+....+.++++|+|+++|++|..+| +..+.++++.+.. .+++++++++++|.+....
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~ 252 (270)
T 3rm3_A 177 LAYEKTPTASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVP--PGNADIIFQGISS--TEKEIVRLRNSYHVATLDY 252 (270)
T ss_dssp CCCSEEEHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSC--TTHHHHHHHHSCC--SSEEEEEESSCCSCGGGST
T ss_pred hcccccChhHHHHHHHHHHHHHhhhhhcCCCEEEEECCCCcccC--HHHHHHHHHhcCC--CcceEEEeCCCCcccccCc
Confidence 00000000000 011224567789999999999999998 8888888887764 3579999999999987554
Q ss_pred cHHHHHHHHHHHHHHhc
Q 011049 467 NVMHVIWETDRWLQKYC 483 (494)
Q Consensus 467 ~~~~~~~~~~~fl~~~l 483 (494)
....+.+.+.+||+++.
T Consensus 253 ~~~~~~~~i~~fl~~~~ 269 (270)
T 3rm3_A 253 DQPMIIERSLEFFAKHA 269 (270)
T ss_dssp THHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHhcC
Confidence 55788999999999874
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.81 E-value=8.5e-19 Score=158.14 Aligned_cols=132 Identities=16% Similarity=0.161 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHh
Q 011049 325 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIE 404 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (494)
...+...++...+.+ +|++||+++|+|+||.+++.++.++|+.|+++|+++|.... ...+..
T Consensus 114 ~~~i~~li~~~~~~g-i~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~-----------------~~~~~~ 175 (246)
T 4f21_A 114 IAKVNKLIDSQVNQG-IASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPA-----------------WDNFKG 175 (246)
T ss_dssp HHHHHHHHHHHHHC--CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTT-----------------HHHHST
T ss_pred HHHHHHHHHHHHHcC-CChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCc-----------------cccccc
Confidence 444445555555554 89999999999999999999999999999999999985321 000000
Q ss_pred cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 405 MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 405 ~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
.......++|+|++||+.|++|| +..++++++.|++.|.++++..|++.+|.+.. +.++.+.+||.+.|+
T Consensus 176 ---~~~~~~~~~Pvl~~HG~~D~vVp--~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~~-----~~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 176 ---KITSINKGLPILVCHGTDDQVLP--EVLGHDLSDKLKVSGFANEYKHYVGMQHSVCM-----EEIKDISNFIAKTFK 245 (246)
T ss_dssp ---TCCGGGTTCCEEEEEETTCSSSC--HHHHHHHHHHHHTTTCCEEEEEESSCCSSCCH-----HHHHHHHHHHHHHTT
T ss_pred ---cccccccCCchhhcccCCCCccC--HHHHHHHHHHHHHCCCCeEEEEECCCCCccCH-----HHHHHHHHHHHHHhC
Confidence 00111235899999999999998 99999999999999999999999999998762 456789999999875
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-18 Score=164.62 Aligned_cols=128 Identities=16% Similarity=0.192 Sum_probs=100.9
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCc
Q 011049 328 AEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSP 407 (494)
Q Consensus 328 ~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 407 (494)
+.+++..+++.. +++.++|||+||.+++.++..+|++++++|+++|... .++
T Consensus 186 ~~~~l~~l~~~~----~~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~------------------------~~~ 237 (328)
T 1qlw_A 186 TVANLSKLAIKL----DGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC------------------------PKP 237 (328)
T ss_dssp HHHHHHHHHHHH----TSEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC------------------------CCG
T ss_pred HHHHHHHHHHHh----CCceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC------------------------CCH
Confidence 334444444432 3799999999999999999999999999999987531 011
Q ss_pred cccccCCCCCEEEEecCCCCCCCCCH-----HHHHHHHHHHHhCCCcEEEEEcCCCC-----CccCCcccHHHHHHHHHH
Q 011049 408 ITHANKIKKPILIIHGEVDDKVGLFP-----MQAERFFDALKGHGALSRLVLLPFEH-----HVYAARENVMHVIWETDR 477 (494)
Q Consensus 408 ~~~~~~~~~P~li~~G~~D~~v~~~~-----~~~~~~~~~l~~~g~~~~~~~~~~~~-----H~~~~~~~~~~~~~~~~~ 477 (494)
......+++|+|++||++|..+| . .+++++++.+++.|.++++++++++| |.+....+...+.+.+.+
T Consensus 238 ~~~~~~~~~PvLii~G~~D~~~p--~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~ 315 (328)
T 1qlw_A 238 EDVKPLTSIPVLVVFGDHIEEFP--RWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILD 315 (328)
T ss_dssp GGCGGGTTSCEEEEECSSCTTCT--TTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHH
T ss_pred HHHhhccCCCEEEEeccCCcccc--chhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHH
Confidence 11223356999999999999987 6 88999999999999999999999665 988765557889999999
Q ss_pred HHHHhcCC
Q 011049 478 WLQKYCLS 485 (494)
Q Consensus 478 fl~~~l~~ 485 (494)
||++++..
T Consensus 316 fl~~~~~~ 323 (328)
T 1qlw_A 316 WIGRNTAK 323 (328)
T ss_dssp HHHHTCC-
T ss_pred HHHhcccC
Confidence 99998764
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-18 Score=159.35 Aligned_cols=220 Identities=10% Similarity=0.161 Sum_probs=140.0
Q ss_pred EEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC
Q 011049 228 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 307 (494)
Q Consensus 228 ~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~ 307 (494)
.++..+|. ...+|.|.+ .+.|+||++|||+|..++. ..+ .......+++.||.|+.++++.
T Consensus 8 ~~~~~~~~--~~~~y~p~~------~~~p~iv~~HGGg~~~g~~--------~~~---~~~~~~~l~~~g~~Vi~vdYrl 68 (274)
T 2qru_A 8 NQTLANGA--TVTIYPTTT------EPTNYVVYLHGGGMIYGTK--------SDL---PEELKELFTSNGYTVLALDYLL 68 (274)
T ss_dssp EEECTTSC--EEEEECCSS------SSCEEEEEECCSTTTSCCG--------GGC---CHHHHHHHHTTTEEEEEECCCC
T ss_pred cccccCCe--eEEEEcCCC------CCCcEEEEEeCccccCCCh--------hhc---hHHHHHHHHHCCCEEEEeCCCC
Confidence 34445664 446777753 2379999999998754321 112 1123345678899999999875
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHH---hCCCceeEEEeCCCCCCCCCC
Q 011049 308 IIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA---HAPHLFCCGIARSGSYNKTLT 384 (494)
Q Consensus 308 ~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~---~~p~~~~a~v~~~~~~~~~~~ 384 (494)
.. + . .....++|+.++++|+.++.. +++||+|+|+|+||.+|+.++. ..+.++++++.++|+.+....
T Consensus 69 aP---e----~-~~p~~~~D~~~al~~l~~~~~-~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~ 139 (274)
T 2qru_A 69 AP---N----T-KIDHILRTLTETFQLLNEEII-QNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFI 139 (274)
T ss_dssp TT---T----S-CHHHHHHHHHHHHHHHHHHTT-TTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGG
T ss_pred CC---C----C-CCcHHHHHHHHHHHHHHhccc-cCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEccccccccc
Confidence 32 1 1 235668999999999998752 3789999999999999999987 356788899988887652110
Q ss_pred CC-------Ccccc-----------cccccccH-H------------HHHhc--------Cccc--cccCCCCCEEEEec
Q 011049 385 PF-------GFQTE-----------FRTLWEAT-N------------VYIEM--------SPIT--HANKIKKPILIIHG 423 (494)
Q Consensus 385 ~~-------~~~~~-----------~~~~~~~~-~------------~~~~~--------sp~~--~~~~~~~P~li~~G 423 (494)
.. ..... ....+... . .+... .++. .+.++ +|+||++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-pP~li~~G 218 (274)
T 2qru_A 140 KEPRKLLKQAISAKEIAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKTF-PPCFSTAS 218 (274)
T ss_dssp GSCCCSCSSCCCSGGGTTSCCSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHHHHHTS-CCEEEEEE
T ss_pred CCchhhccccccHHHHhhhcccCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCChhhhcCC-CCEEEEEe
Confidence 00 00000 00000000 0 01000 0011 23445 79999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCc---ccHHHHHHHHHHHHHHh
Q 011049 424 EVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR---ENVMHVIWETDRWLQKY 482 (494)
Q Consensus 424 ~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~---~~~~~~~~~~~~fl~~~ 482 (494)
+.|..++ ..+++++.+++ .+++++++++++|++... +....+.+.+.+||+++
T Consensus 219 ~~D~~~~--~~~~~~l~~~~----~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 274 (274)
T 2qru_A 219 SSDEEVP--FRYSKKIGRTI----PESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKER 274 (274)
T ss_dssp TTCSSSC--THHHHHHHHHS----TTCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHTC
T ss_pred cCCCCcC--HHHHHHHHHhC----CCcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhhC
Confidence 9999987 77776666655 457999999999998532 12235677888998753
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.8e-18 Score=160.29 Aligned_cols=235 Identities=13% Similarity=0.094 Sum_probs=151.2
Q ss_pred ccEEEEEEcC-CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 223 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 223 ~~~~~~~~~~-dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
+.+.+++.+. .|.++..+ +|+++ + |+|+++||.+.. .+...|.... .....++++||+|+
T Consensus 5 ~~~~~~~~s~~~~~~~~v~--~~p~~------~-~~v~llHG~~~~---------~~~~~w~~~~-~~~~~l~~~~~~vv 65 (280)
T 1dqz_A 5 PVEYLQVPSASMGRDIKVQ--FQGGG------P-HAVYLLDGLRAQ---------DDYNGWDINT-PAFEEYYQSGLSVI 65 (280)
T ss_dssp CEEEEEEEETTTTEEEEEE--EECCS------S-SEEEECCCTTCC---------SSSCHHHHHS-CHHHHHTTSSSEEE
T ss_pred eEEEEEEECcccCceeEEE--EcCCC------C-CEEEEECCCCCC---------CCcccccccC-cHHHHHhcCCeEEE
Confidence 4567777765 45566655 45543 1 489999997410 1111222111 11235667899999
Q ss_pred eCCCCCCCCCCC--CC-------CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEE
Q 011049 302 AGPSIPIIGEGD--KL-------PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCG 372 (494)
Q Consensus 302 ~~~~~~~~g~g~--~~-------~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~ 372 (494)
+++.++..++.. .. ....+.....+|+...+ .++..+++++++|+|+||||++|+.++.++|++|+++
T Consensus 66 ~pd~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i---~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~ 142 (280)
T 1dqz_A 66 MPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWL---QANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYA 142 (280)
T ss_dssp EECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHH---HHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEE
T ss_pred EECCCCCccccCCCCCCccccccccccHHHHHHHHHHHHH---HHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEE
Confidence 987654333221 10 11223222334554444 3423367789999999999999999999999999999
Q ss_pred EeCCCCCCCCCCCCC-cc-----cc----cccccc--cHHHHHhcCccccccCC---CCCEEEEecCCCC----------
Q 011049 373 IARSGSYNKTLTPFG-FQ-----TE----FRTLWE--ATNVYIEMSPITHANKI---KKPILIIHGEVDD---------- 427 (494)
Q Consensus 373 v~~~~~~~~~~~~~~-~~-----~~----~~~~~~--~~~~~~~~sp~~~~~~~---~~P~li~~G~~D~---------- 427 (494)
++++|..+....... +. .. ....|. ..+.+...+|..++.++ ++|+++.||+.|.
T Consensus 143 v~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~l~~~~~~~~l~~G~~D~~~~~~~~~~~ 222 (280)
T 1dqz_A 143 ASLSGFLNPSESWWPTLIGLAMNDSGGYNANSMWGPSSDPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPA 222 (280)
T ss_dssp EEESCCCCTTSTTHHHHHHHHHHHTTSCCHHHHHCSTTSHHHHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHH
T ss_pred EEecCcccccCcchhhhHHHHhhhccCcCHHHhcCCCCchhhhhcCHHHHHHHHHhcCCeEEEEeCCCCcccccccccch
Confidence 999998764321000 00 00 000111 12356677888766655 5899999999997
Q ss_pred ----CCCCCHHHHHHHHHHHHhCC-CcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 428 ----KVGLFPMQAERFFDALKGHG-ALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 428 ----~v~~~~~~~~~~~~~l~~~g-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
.++ ..++++++++|+++| +++++.++++++|.+. .+...+...+.||.+.|+
T Consensus 223 ~~~e~~~--~~~~~~~~~~L~~~g~~~~~~~~~~~g~H~~~---~w~~~l~~~l~~l~~~l~ 279 (280)
T 1dqz_A 223 KFLEGLT--LRTNQTFRDTYAADGGRNGVFNFPPNGTHSWP---YWNEQLVAMKADIQHVLN 279 (280)
T ss_dssp HHHHHHH--HHHHHHHHHHHHHTTCCSEEEECCSCCCSSHH---HHHHHHHHTHHHHHHHHH
T ss_pred hhHHHHH--HHHHHHHHHHHHhCCCCceEEEecCCCccChH---HHHHHHHHHHHHHHHHhC
Confidence 455 889999999999999 9999999998899763 344566777888887765
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.5e-19 Score=172.99 Aligned_cols=156 Identities=10% Similarity=0.011 Sum_probs=106.7
Q ss_pred cccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCC---CccCCCCchhHHHHHhC
Q 011049 220 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSP---NEFSGMTPTSSLIFLAR 296 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~ 296 (494)
..+..+.+++++.+|..+++++++|++. ++++|+||++||.+.......+.....+ ..+.......+..|+++
T Consensus 83 ~g~~~e~v~~~~~~g~~l~~~l~~P~~~----~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~ 158 (391)
T 3g8y_A 83 EGYILEKWEFYPFPKSVSTFLVLKPEHL----KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKE 158 (391)
T ss_dssp TTEEEEEEEECCSTTCCEEEEEEEETTC----CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTT
T ss_pred CCEEEEEEEEEcCCCCEEEEEEEeCCCC----CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHC
Confidence 3456788999999999999999999863 2458999999997643211000000000 00110011356788999
Q ss_pred CeEEEeCCCCCCCCCCCCCCC-----c--------------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHH
Q 011049 297 RFAVLAGPSIPIIGEGDKLPN-----D--------------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFM 357 (494)
Q Consensus 297 G~~v~~~~~~~~~g~g~~~~~-----~--------------~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~ 357 (494)
||+|+++|.++....+..... . .+....+.|+.+++++|.+++.+|++||+|+|+|+||++
T Consensus 159 G~~Vl~~D~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~ 238 (391)
T 3g8y_A 159 GYVAVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEP 238 (391)
T ss_dssp TCEEEECCCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHH
T ss_pred CCEEEEecCCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHH
Confidence 999999887654332221100 0 111223479999999999999999999999999999999
Q ss_pred HHHHHHhCCCceeEEEeCCCCCC
Q 011049 358 TAHLLAHAPHLFCCGIARSGSYN 380 (494)
Q Consensus 358 a~~~~~~~p~~~~a~v~~~~~~~ 380 (494)
++.+++.. ++++++|+.+++..
T Consensus 239 al~~a~~~-~~i~a~v~~~~~~~ 260 (391)
T 3g8y_A 239 MMVLGVLD-KDIYAFVYNDFLCQ 260 (391)
T ss_dssp HHHHHHHC-TTCCEEEEESCBCC
T ss_pred HHHHHHcC-CceeEEEEccCCCC
Confidence 99998886 67899997776544
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-18 Score=159.35 Aligned_cols=188 Identities=14% Similarity=0.148 Sum_probs=131.3
Q ss_pred EEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCc
Q 011049 239 ATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND 318 (494)
Q Consensus 239 ~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~ 318 (494)
+.+|+|.+...+ ..+.|+||++||++.+ ...| ......|+++||.|+.++.+++ +.
T Consensus 34 ~~~~~p~~~~~~-g~~~p~vv~~HG~~~~-----------~~~~----~~~~~~l~~~G~~v~~~d~~~s---~~----- 89 (258)
T 2fx5_A 34 CRIYRPRDLGQG-GVRHPVILWGNGTGAG-----------PSTY----AGLLSHWASHGFVVAAAETSNA---GT----- 89 (258)
T ss_dssp EEEEEESSTTGG-GCCEEEEEEECCTTCC-----------GGGG----HHHHHHHHHHTCEEEEECCSCC---TT-----
T ss_pred EEEEeCCCCccc-CCCceEEEEECCCCCC-----------chhH----HHHHHHHHhCCeEEEEecCCCC---cc-----
Confidence 888899763221 1248999999997521 1112 2345678889999999877632 10
Q ss_pred hhHHHHHHHHHHHHHHHHHc---------CCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcc
Q 011049 319 RFVEQLVSSAEAAVEEVVRR---------GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQ 389 (494)
Q Consensus 319 ~~~~~~~~d~~~~v~~l~~~---------~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~ 389 (494)
..|+..+++++.+. ..+|.++++++|||+||++++.++ .+.+++++++++|.....
T Consensus 90 ------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~~------- 154 (258)
T 2fx5_A 90 ------GREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLGL------- 154 (258)
T ss_dssp ------SHHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSST-------
T ss_pred ------HHHHHHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCccccc-------
Confidence 12333445555432 235678999999999999999887 457899999988753210
Q ss_pred cccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHH-HHHHHHHHHhCCCcEEEEEcCCCCCccCCcccH
Q 011049 390 TEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQ-AERFFDALKGHGALSRLVLLPFEHHVYAARENV 468 (494)
Q Consensus 390 ~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~ 468 (494)
. .....+.++++|+|+++|++|..+| ... +.++++. .+.+++++++++++|.+.. +..
T Consensus 155 -----~----------~~~~~~~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~~~~g~~H~~~~-~~~ 213 (258)
T 2fx5_A 155 -----G----------HDSASQRRQQGPMFLMSGGGDTIAF--PYLNAQPVYRR---ANVPVFWGERRYVSHFEPV-GSG 213 (258)
T ss_dssp -----T----------CCGGGGGCCSSCEEEEEETTCSSSC--HHHHTHHHHHH---CSSCEEEEEESSCCTTSST-TTC
T ss_pred -----c----------cchhhhccCCCCEEEEEcCCCcccC--chhhHHHHHhc---cCCCeEEEEECCCCCcccc-chH
Confidence 0 0112456788999999999999987 775 6666665 3467899999999998764 344
Q ss_pred HHHHHHHHHHHHHhcCCC
Q 011049 469 MHVIWETDRWLQKYCLSN 486 (494)
Q Consensus 469 ~~~~~~~~~fl~~~l~~~ 486 (494)
..+.+.+.+||++++.+.
T Consensus 214 ~~~~~~i~~fl~~~l~~~ 231 (258)
T 2fx5_A 214 GAYRGPSTAWFRFQLMDD 231 (258)
T ss_dssp GGGHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhcCc
Confidence 577888999999888643
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=6.7e-19 Score=170.92 Aligned_cols=227 Identities=12% Similarity=0.019 Sum_probs=147.1
Q ss_pred cccEEEEEEcC-CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeE-
Q 011049 222 LQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA- 299 (494)
Q Consensus 222 ~~~~~~~~~~~-dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~- 299 (494)
.+.+.+++.+. .|..+.+++|+|++++ ..++|+|+++||++|... .........|+++|++
T Consensus 166 G~v~~~~~~S~~~g~~~~~~vy~P~~~~---~~~~PvlvllHG~~~~~~--------------~~~~~~~~~l~~~g~~~ 228 (403)
T 3c8d_A 166 IPAKEIIWKSERLKNSRRVWIFTTGDVT---AEERPLAVLLDGEFWAQS--------------MPVWPVLTSLTHRQQLP 228 (403)
T ss_dssp SCCEEEEEEETTTTEEEEEEEEEC--------CCCCEEEESSHHHHHHT--------------SCCHHHHHHHHHTTSSC
T ss_pred CceEEEEEEccccCCcEEEEEEeCCCCC---CCCCCEEEEeCCHHHhhc--------------CcHHHHHHHHHHcCCCC
Confidence 35778888875 6788999999999764 234999999999653210 0112345577888874
Q ss_pred ---EEeCCCCCCCCCCCCCC-CchhHHHHHHHHHHHHHHHHHcC--CCCCCcEEEEecChHHHHHHHHHHhCCCceeEEE
Q 011049 300 ---VLAGPSIPIIGEGDKLP-NDRFVEQLVSSAEAAVEEVVRRG--VADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGI 373 (494)
Q Consensus 300 ---v~~~~~~~~~g~g~~~~-~~~~~~~~~~d~~~~v~~l~~~~--~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v 373 (494)
|+.+++++..++..... ...+.+...+ +++.++.++. ..|+++++|+|+|+||++++.++.++|++|++++
T Consensus 229 p~iVV~~d~~~~~~r~~~~~~~~~~~~~l~~---el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~ 305 (403)
T 3c8d_A 229 PAVYVLIDAIDTTHRAHELPCNADFWLAVQQ---ELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVL 305 (403)
T ss_dssp SCEEEEECCCSHHHHHHHSSSCHHHHHHHHH---THHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEE
T ss_pred CeEEEEECCCCCccccccCCChHHHHHHHHH---HHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEE
Confidence 78766643211111111 1222222223 3455666543 2588999999999999999999999999999999
Q ss_pred eCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEE
Q 011049 374 ARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLV 453 (494)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~ 453 (494)
+++|.+.+.... .. ...+ ..+.+.. . ......+|++++||+.|..+ ..++++++++|+++|+++++.
T Consensus 306 ~~sg~~~~~~~~----~~-~~~~-~~~~~~~-~---~~~~~~~~i~l~~G~~D~~~---~~~~~~l~~~L~~~G~~v~~~ 372 (403)
T 3c8d_A 306 SQSGSYWWPHRG----GQ-QEGV-LLEKLKA-G---EVSAEGLRIVLEAGIREPMI---MRANQALYAQLHPIKESIFWR 372 (403)
T ss_dssp EESCCTTTTCTT----SS-SCCH-HHHHHHT-T---SSCCCSCEEEEEEESSCHHH---HHHHHHHHHHTGGGTTSEEEE
T ss_pred EeccccccCCCC----CC-cHHH-HHHHHHh-c---cccCCCceEEEEeeCCCchh---HHHHHHHHHHHHhCCCCEEEE
Confidence 999976532110 00 0000 0111111 1 12345688999999998754 688999999999999999999
Q ss_pred EcCCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 454 LLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 454 ~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
+|++ +|.+. .....+...+.||.+....
T Consensus 373 ~~~G-gH~~~---~w~~~l~~~l~~l~~~~~~ 400 (403)
T 3c8d_A 373 QVDG-GHDAL---CWRGGLMQGLIDLWQPLFH 400 (403)
T ss_dssp EESC-CSCHH---HHHHHHHHHHHHHHGGGTC
T ss_pred EeCC-CCCHH---HHHHHHHHHHHHHhccccc
Confidence 9999 69753 3345667778888776543
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=169.26 Aligned_cols=189 Identities=16% Similarity=0.124 Sum_probs=129.9
Q ss_pred CCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCC--------------CC---
Q 011049 253 GPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGD--------------KL--- 315 (494)
Q Consensus 253 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~--------------~~--- 315 (494)
+++|+||++||++.. ...+ ...+..|+++||+|++++.++...... .+
T Consensus 96 ~~~P~Vv~~HG~~~~-----------~~~~----~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~ 160 (383)
T 3d59_A 96 EKYPLVVFSHGLGAF-----------RTLY----SAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYL 160 (383)
T ss_dssp SCEEEEEEECCTTCC-----------TTTT----HHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEEC
T ss_pred CCCCEEEEcCCCCCC-----------chHH----HHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeec
Confidence 358999999997521 1112 346678899999999988765422110 00
Q ss_pred ----CCch------hHHHHHHHHHHHHHHHHH--------------------cCCCCCCcEEEEecChHHHHHHHHHHhC
Q 011049 316 ----PNDR------FVEQLVSSAEAAVEEVVR--------------------RGVADPSRIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 316 ----~~~~------~~~~~~~d~~~~v~~l~~--------------------~~~~d~~ri~i~G~S~GG~~a~~~~~~~ 365 (494)
.... ......+|+..+++++.+ ...+|.+||+++|||+||++++.++.+.
T Consensus 161 ~~~~g~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~ 240 (383)
T 3d59_A 161 RTLKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSED 240 (383)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHC
T ss_pred cccCcccchhhhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhC
Confidence 0000 112236788999999976 4557888999999999999999999887
Q ss_pred CCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 011049 366 PHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG 445 (494)
Q Consensus 366 p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~ 445 (494)
.+++++|+++|.... . . .....++++|+|++||++|..+ .. .+..++|.+
T Consensus 241 -~~v~a~v~~~~~~~p----~--~------------------~~~~~~i~~P~Lii~g~~D~~~----~~-~~~~~~l~~ 290 (383)
T 3d59_A 241 -QRFRCGIALDAWMFP----L--G------------------DEVYSRIPQPLFFINSEYFQYP----AN-IIKMKKCYS 290 (383)
T ss_dssp -TTCCEEEEESCCCTT----C--C------------------GGGGGSCCSCEEEEEETTTCCH----HH-HHHHHTTCC
T ss_pred -CCccEEEEeCCccCC----C--c------------------hhhhccCCCCEEEEecccccch----hh-HHHHHHHHh
Confidence 469999999874310 0 0 0123567899999999999853 33 233466766
Q ss_pred CCCcEEEEEcCCCCCccCC------------------cccH----HHHHHHHHHHHHHhcCCC
Q 011049 446 HGALSRLVLLPFEHHVYAA------------------RENV----MHVIWETDRWLQKYCLSN 486 (494)
Q Consensus 446 ~g~~~~~~~~~~~~H~~~~------------------~~~~----~~~~~~~~~fl~~~l~~~ 486 (494)
.+.+.+++++++++|.+.. ..+. ....+.+++||+++|++.
T Consensus 291 ~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Fl~~~L~~~ 353 (383)
T 3d59_A 291 PDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLGLH 353 (383)
T ss_dssp TTSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHHHHHHHHHHHHcCCc
Confidence 7788999999999998631 0112 233346999999999865
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.79 E-value=9.1e-19 Score=170.36 Aligned_cols=224 Identities=12% Similarity=0.095 Sum_probs=137.4
Q ss_pred cccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCC----CccCCCCchhHHHHHh
Q 011049 220 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSP----NEFSGMTPTSSLIFLA 295 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~ 295 (494)
..+..+.+++++.+|.++++++++|++. ++++|+||++||++.......+ ..+.. ..|.......+..|++
T Consensus 88 ~g~~~e~v~~~~~~g~~l~~~l~~P~~~----~~~~P~Vv~~HG~g~~~~~~~~-~~g~~~~~~~~y~~~~~~~a~~la~ 162 (398)
T 3nuz_A 88 EGYRLEKWEFYPLPKCVSTFLVLIPDNI----NKPVPAILCIPGSGGNKEGLAG-EPGIAPKLNDRYKDPKLTQALNFVK 162 (398)
T ss_dssp SSEEEEEEEECCSTTBCEEEEEEEESSC----CSCEEEEEEECCTTCCHHHHHT-CCCSSSTTCCSTTCTTTCHHHHHHT
T ss_pred CCEEEEEEEEEcCCCcEEEEEEEeCCCC----CCCccEEEEEcCCCCCcccccc-cccccccccccccchHHHHHHHHHH
Confidence 3456788999999999999999999863 2458999999997642110000 00000 0111101135678999
Q ss_pred CCeEEEeCCCCCCCCCCCCC-------------------CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHH
Q 011049 296 RRFAVLAGPSIPIIGEGDKL-------------------PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAF 356 (494)
Q Consensus 296 ~G~~v~~~~~~~~~g~g~~~-------------------~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~ 356 (494)
+||+|+++|.++....+... .+..+....+.|+.++++||.+++.+|++||+|+|||+||+
T Consensus 163 ~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~ 242 (398)
T 3nuz_A 163 EGYIAVAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTE 242 (398)
T ss_dssp TTCEEEEECCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHH
T ss_pred CCCEEEEecCCCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHH
Confidence 99999998877543332211 11122334568999999999999889999999999999999
Q ss_pred HHHHHHHhCCCceeEEEeCCCCCCCCC-----CC------CCcccccccccccHHHHHhcCccccccCC-CCCEEEEecC
Q 011049 357 MTAHLLAHAPHLFCCGIARSGSYNKTL-----TP------FGFQTEFRTLWEATNVYIEMSPITHANKI-KKPILIIHGE 424 (494)
Q Consensus 357 ~a~~~~~~~p~~~~a~v~~~~~~~~~~-----~~------~~~~~~~~~~~~~~~~~~~~sp~~~~~~~-~~P~li~~G~ 424 (494)
+++.+++.. ++++++|+.+++..... .. ..+...... -.+..+...+....+..+ ..|+||+||+
T Consensus 243 ~a~~~aa~~-~~i~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~d~~~~~~~~ap~PlLii~G~ 319 (398)
T 3nuz_A 243 PMMVLGTLD-TSIYAFVYNDFLCQTQERAEVMTMPDKNGRRPFPNSIRH--LIPDFWKNFNFPDIVAALAPRPIILTEGG 319 (398)
T ss_dssp HHHHHHHHC-TTCCEEEEESCBCCHHHHHHHCCCCCTTSCCCCSSCGGG--CCTTHHHHCCHHHHHHHTTTSCEEECSCB
T ss_pred HHHHHHhcC-CcEEEEEEecccccchhhhhhhccccccccccCCccHHH--hcchHhhhCCHHHHHHhhCCCcEEEeeCC
Confidence 999998887 67888888665433100 00 000000000 001111112222222222 3699999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcC
Q 011049 425 VDDKVGLFPMQAERFFDALKGHGALSRLVLLP 456 (494)
Q Consensus 425 ~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~ 456 (494)
.|.. ..+..++++++.. ..++++.+||
T Consensus 320 ~D~~----v~~~~~~y~~~g~-~~~~~~~~~p 346 (398)
T 3nuz_A 320 LDRD----LDLVRKAYAIVGT-PDNVKIYHYK 346 (398)
T ss_dssp CHHH----HHHHHHHHHHHTC-TTSEEECCCG
T ss_pred chHH----HHHHHHHHHHcCC-CcceEEEEeC
Confidence 9964 4555666665533 3457777777
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=99.78 E-value=9.5e-18 Score=154.50 Aligned_cols=213 Identities=15% Similarity=0.129 Sum_probs=134.8
Q ss_pred EEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC
Q 011049 228 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 307 (494)
Q Consensus 228 ~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~ 307 (494)
++.+.||.++.+..+- . -|.||++||.+.+ ...|. .....|+++||.|+++|.+
T Consensus 2 ~~~~~~g~~l~y~~~G--------~--g~~vvllHG~~~~-----------~~~w~----~~~~~l~~~g~~vi~~D~~- 55 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDWG--------S--GKPVLFSHGWLLD-----------ADMWE----YQMEYLSSRGYRTIAFDRR- 55 (271)
T ss_dssp EEECTTSCEEEEEEES--------S--SSEEEEECCTTCC-----------GGGGH----HHHHHHHTTTCEEEEECCT-
T ss_pred eEEcCCCCEEEEEccC--------C--CCeEEEECCCCCc-----------HHHHH----HHHHHHHhCCceEEEecCC-
Confidence 3677899998876652 1 2568889996521 11221 3445678899999996665
Q ss_pred CCCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHH-hCCCceeEEEeCCCCCCCCCC
Q 011049 308 IIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA-HAPHLFCCGIARSGSYNKTLT 384 (494)
Q Consensus 308 ~~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~p~~~~a~v~~~~~~~~~~~ 384 (494)
|+|.+... ....+..++|+.+.++.+ +.+++.++||||||.+++.+++ +.|++++++|+.++.......
T Consensus 56 --G~G~S~~~~~~~~~~~~a~d~~~~l~~l------~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~ 127 (271)
T 3ia2_A 56 --GFGRSDQPWTGNDYDTFADDIAQLIEHL------DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQ 127 (271)
T ss_dssp --TSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBC
T ss_pred --CCccCCCCCCCCCHHHHHHHHHHHHHHh------CCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccC
Confidence 55555322 223466678887777765 2368999999999986665555 458999999988764321100
Q ss_pred ----CCCccccc-------------------cccc--------cc----------------------HHHHHhcCccccc
Q 011049 385 ----PFGFQTEF-------------------RTLW--------EA----------------------TNVYIEMSPITHA 411 (494)
Q Consensus 385 ----~~~~~~~~-------------------~~~~--------~~----------------------~~~~~~~sp~~~~ 411 (494)
+....... ..++ .. ...+...+....+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 207 (271)
T 3ia2_A 128 KPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDM 207 (271)
T ss_dssp BTTBTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHH
T ss_pred CCCCcccccHHHHHHHHHHHHhhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccc
Confidence 00000000 0000 00 0001111222345
Q ss_pred cCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 412 NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 412 ~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
.++++|+|+++|++|..+| +..+.++.+.+. ...++.++++++|.+. .+....+.+.+.+||.
T Consensus 208 ~~i~~P~Lvi~G~~D~~~p--~~~~~~~~~~~~---~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~Fl~ 270 (271)
T 3ia2_A 208 AKIDVPTLVIHGDGDQIVP--FETTGKVAAELI---KGAELKVYKDAPHGFA-VTHAQQLNEDLLAFLK 270 (271)
T ss_dssp TTCCSCEEEEEETTCSSSC--GGGTHHHHHHHS---TTCEEEEETTCCTTHH-HHTHHHHHHHHHHHHT
T ss_pred cCCCCCEEEEEeCCCCcCC--hHHHHHHHHHhC---CCceEEEEcCCCCccc-ccCHHHHHHHHHHHhh
Confidence 7899999999999999988 776555544442 3468999999999876 4667788888999985
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.8e-18 Score=147.05 Aligned_cols=172 Identities=12% Similarity=0.080 Sum_probs=121.0
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 334 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~ 334 (494)
.|+||++||.+. +...+. .......|+++||.|+.++.+ |+|.+.... ......+++.+++++
T Consensus 4 ~~~vv~~HG~~~-----------~~~~~~--~~~~~~~l~~~g~~v~~~d~~---g~g~s~~~~-~~~~~~~~~~~~~~~ 66 (176)
T 2qjw_A 4 RGHCILAHGFES-----------GPDALK--VTALAEVAERLGWTHERPDFT---DLDARRDLG-QLGDVRGRLQRLLEI 66 (176)
T ss_dssp SCEEEEECCTTC-----------CTTSHH--HHHHHHHHHHTTCEEECCCCH---HHHTCGGGC-TTCCHHHHHHHHHHH
T ss_pred CcEEEEEeCCCC-----------CccHHH--HHHHHHHHHHCCCEEEEeCCC---CCCCCCCCC-CCCCHHHHHHHHHHH
Confidence 699999999641 111111 113455778899999996665 344332111 111123344555666
Q ss_pred HHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCC
Q 011049 335 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKI 414 (494)
Q Consensus 335 l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~ 414 (494)
+.+.. +.++++++|||+||.+++.++.++| ++++|+.+|..+... + ....++
T Consensus 67 ~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~------------~------------~~~~~~ 118 (176)
T 2qjw_A 67 ARAAT--EKGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGP------------L------------PALDAA 118 (176)
T ss_dssp HHHHH--TTSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTT------------B------------CCCCCC
T ss_pred HHhcC--CCCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCccc------------c------------Cccccc
Confidence 65553 3478999999999999999999997 899999988654211 0 004567
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
++|+|+++|++|..+| ..++.++++.+ +++++++ +++|.+. +....+.+.+.+||++
T Consensus 119 ~~P~l~i~g~~D~~~~--~~~~~~~~~~~-----~~~~~~~-~~~H~~~--~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 119 AVPISIVHAWHDELIP--AADVIAWAQAR-----SARLLLV-DDGHRLG--AHVQAASRAFAELLQS 175 (176)
T ss_dssp SSCEEEEEETTCSSSC--HHHHHHHHHHH-----TCEEEEE-SSCTTCT--TCHHHHHHHHHHHHHT
T ss_pred CCCEEEEEcCCCCccC--HHHHHHHHHhC-----CceEEEe-CCCcccc--ccHHHHHHHHHHHHHh
Confidence 8999999999999998 89998888887 3678888 8899973 5667788888888864
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=9.2e-19 Score=161.59 Aligned_cols=223 Identities=11% Similarity=0.033 Sum_probs=133.9
Q ss_pred ccEEEEEEcCC-CceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEE
Q 011049 223 QKEMIKYQRKD-GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAV 300 (494)
Q Consensus 223 ~~~~~~~~~~d-g~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v 300 (494)
+.+.+++.+.. |.++.+++|+|+++++.+ ++|+|+++||++. +..........+++ .+.+|
T Consensus 12 ~~~~~~~~S~~~~~~~~~~vylP~~y~~~~--~yPvly~l~G~~~---------------~~~~~~~~~~~l~~~~~~iv 74 (278)
T 2gzs_A 12 HFSATSFDSVDGTRHYRVWTAVPNTTAPAS--GYPILYMLDGNAV---------------MDRLDDELLKQLSEKTPPVI 74 (278)
T ss_dssp EEEEEEEECTTSSCEEEEEEEEESSCCCTT--CEEEEEESSHHHH---------------HHHCCHHHHHHHTTSCCCEE
T ss_pred ceEEEEEEcCCCCceEEEEEECCCCCCCCC--CCCEEEEeeChhH---------------HHHHHHHHHHHhccCCCeEE
Confidence 56778888876 679999999999987654 4999887777531 11111122334554 56666
Q ss_pred EeCCCCCCC-----CCCCCC---C--------------CchhHHHHHHHH-HHHHHHHHHcCCCCCCcEEEEecChHHHH
Q 011049 301 LAGPSIPII-----GEGDKL---P--------------NDRFVEQLVSSA-EAAVEEVVRRGVADPSRIAVGGHSYGAFM 357 (494)
Q Consensus 301 ~~~~~~~~~-----g~g~~~---~--------------~~~~~~~~~~d~-~~~v~~l~~~~~~d~~ri~i~G~S~GG~~ 357 (494)
+.+++.... +++... . .........+-+ ...+.++.++..+|++|++|+|+||||++
T Consensus 75 V~v~~~~~~~~~~~~R~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~ 154 (278)
T 2gzs_A 75 VAVGYQTNLPFDLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLF 154 (278)
T ss_dssp EEEEESSSSSCCHHHHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHH
T ss_pred EEEcCCCCCcCcccccccccCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHH
Confidence 653332110 000000 0 000011111111 12344555556688889999999999999
Q ss_pred HHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCC------C
Q 011049 358 TAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVG------L 431 (494)
Q Consensus 358 a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~------~ 431 (494)
++.++.+ |++|+++++.+|...+. .. . .........+ . ..-..|+++.+|+.|..++ +
T Consensus 155 a~~~~~~-p~~f~~~~~~s~~~~~~-------~~--~---~~~~~~~~~~--~-~~~~~~i~l~~G~~d~~~~~~~~~~~ 218 (278)
T 2gzs_A 155 VLDSWLS-SSYFRSYYSASPSLGRG-------YD--A---LLSRVTAVEP--L-QFCTKHLAIMEGSATQGDNRETHAVG 218 (278)
T ss_dssp HHHHHHH-CSSCSEEEEESGGGSTT-------HH--H---HHHHHHTSCT--T-TTTTCEEEEEECCC-----------C
T ss_pred HHHHHhC-ccccCeEEEeCcchhcC-------cc--h---HHHHHHHhhc--c-CCCCCcEEEEecCccccccccchhhh
Confidence 9999999 99999999999864211 00 0 0000111111 0 1124689999999998631 0
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 432 FPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 432 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
+..++++++++|+++|+++++.++|+++|++... ..+...+.||.++
T Consensus 219 ~~~~~~~~~~~L~~~g~~~~~~~~~g~~H~~~~~----~~~~~~l~fl~~~ 265 (278)
T 2gzs_A 219 VLSKIHTTLTILKDKGVNAVFWDFPNLGHGPMFN----ASFRQALLDISGE 265 (278)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECTTCCHHHHHH----HHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHcCCCeeEEEEcCCCCccchhH----HHHHHHHHHHhhC
Confidence 1688999999999999999999999999985422 1223456676543
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.77 E-value=3.5e-17 Score=151.04 Aligned_cols=214 Identities=17% Similarity=0.143 Sum_probs=136.3
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 308 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 308 (494)
+++.||.++.+..+-|++ .|.||++||.+.+ ...| ......|+++||.|+++|.+
T Consensus 3 ~~~~~g~~l~y~~~g~~~--------~~~vvllHG~~~~-----------~~~w----~~~~~~l~~~g~~vi~~D~~-- 57 (275)
T 1a88_A 3 VTTSDGTNIFYKDWGPRD--------GLPVVFHHGWPLS-----------ADDW----DNQMLFFLSHGYRVIAHDRR-- 57 (275)
T ss_dssp EECTTSCEEEEEEESCTT--------SCEEEEECCTTCC-----------GGGG----HHHHHHHHHTTCEEEEECCT--
T ss_pred EEccCCCEEEEEEcCCCC--------CceEEEECCCCCc-----------hhhH----HHHHHHHHHCCceEEEEcCC--
Confidence 566789888877664432 3679999996421 1122 23445778899999996654
Q ss_pred CCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC-CCceeEEEeCCCCCCCCC--
Q 011049 309 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYNKTL-- 383 (494)
Q Consensus 309 ~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~-p~~~~a~v~~~~~~~~~~-- 383 (494)
|+|.+... ....+..++|+.+.++.+ + .+++.++|||+||.+++.+++.+ |++++++|+.++......
T Consensus 58 -G~G~S~~~~~~~~~~~~~~dl~~~l~~l---~---~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~ 130 (275)
T 1a88_A 58 -GHGRSDQPSTGHDMDTYAADVAALTEAL---D---LRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKS 130 (275)
T ss_dssp -TSTTSCCCSSCCSHHHHHHHHHHHHHHH---T---CCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCB
T ss_pred -cCCCCCCCCCCCCHHHHHHHHHHHHHHc---C---CCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccC
Confidence 55555322 223466678888777765 2 36799999999999999877776 999999998876432100
Q ss_pred --CCCCcccc-------------------------cc-c----ccc--cHH-------------------HHHhcCcccc
Q 011049 384 --TPFGFQTE-------------------------FR-T----LWE--ATN-------------------VYIEMSPITH 410 (494)
Q Consensus 384 --~~~~~~~~-------------------------~~-~----~~~--~~~-------------------~~~~~sp~~~ 410 (494)
........ .. . ... ..+ .+...+....
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (275)
T 1a88_A 131 DTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDD 210 (275)
T ss_dssp TTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHH
T ss_pred ccCcccCCHHHHHHHHHHHhhhHHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhcccccc
Confidence 00000000 00 0 000 000 0111122234
Q ss_pred ccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 411 ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 411 ~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
+.++++|+|+++|++|..+| +....+.+..+ ..+++++++++++|.+. .+..+.+.+.+.+||.
T Consensus 211 l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 274 (275)
T 1a88_A 211 LKRIDVPVLVAHGTDDQVVP--YADAAPKSAEL---LANATLKSYEGLPHGML-STHPEVLNPDLLAFVK 274 (275)
T ss_dssp HHHCCSCEEEEEETTCSSSC--STTTHHHHHHH---STTEEEEEETTCCTTHH-HHCHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEecCCCccCC--cHHHHHHHHhh---CCCcEEEEcCCCCccHH-HhCHHHHHHHHHHHhh
Confidence 56789999999999999987 66443333332 23589999999999876 3567788888999985
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.76 E-value=4.7e-17 Score=161.20 Aligned_cols=219 Identities=14% Similarity=0.024 Sum_probs=144.8
Q ss_pred EEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCC
Q 011049 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 304 (494)
Q Consensus 225 ~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 304 (494)
..+.+.+.||.++.+... + ..|+||++||.+.+ ...|. .....|+++||.|+.+|
T Consensus 4 i~~~~~~~dG~~l~y~~~---G-------~gp~VV~lHG~~~~-----------~~~~~----~l~~~La~~Gy~Vi~~D 58 (456)
T 3vdx_A 4 ITVGQENSTSIDLYYEDH---G-------TGVPVVLIHGFPLS-----------GHSWE----RQSAALLDAGYRVITYD 58 (456)
T ss_dssp EEEEEETTEEEEEEEEEE---S-------SSEEEEEECCTTCC-----------GGGGT----THHHHHHHHTEEEEEEC
T ss_pred EeecccccCCeEEEEEEe---C-------CCCEEEEECCCCCc-----------HHHHH----HHHHHHHHCCcEEEEEC
Confidence 445667788888875443 1 15889999997532 12232 34567789999999976
Q ss_pred CCCCCCCCCCCC--CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC-CCceeEEEeCCCCCCC
Q 011049 305 SIPIIGEGDKLP--NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYNK 381 (494)
Q Consensus 305 ~~~~~g~g~~~~--~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~-p~~~~a~v~~~~~~~~ 381 (494)
.+ |+|.+.. ......+.++|+.++++++ +.++++++|||+||++++.+++.+ |++++++|++++....
T Consensus 59 ~r---G~G~S~~~~~~~s~~~~a~dl~~~l~~l------~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~ 129 (456)
T 3vdx_A 59 RR---GFGQSSQPTTGYDYDTFAADLNTVLETL------DLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPF 129 (456)
T ss_dssp CT---TSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSC
T ss_pred CC---CCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccc
Confidence 65 4554432 2223566788888888876 346899999999999888888876 8999999999987542
Q ss_pred CCCCCCccccc------------------------------c----cccccHHHHH---------------------hcC
Q 011049 382 TLTPFGFQTEF------------------------------R----TLWEATNVYI---------------------EMS 406 (494)
Q Consensus 382 ~~~~~~~~~~~------------------------------~----~~~~~~~~~~---------------------~~s 406 (494)
........... . ......+.+. ..+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 209 (456)
T 3vdx_A 130 LLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTD 209 (456)
T ss_dssp CBCCSSCCSCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTTCC
T ss_pred cccccccccccchHHHHHHHHHhhhccchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhhhhhhhhhh
Confidence 21110000000 0 0000000000 112
Q ss_pred ccccccCCCCCEEEEecCCCCCCCCCHH-HHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 407 PITHANKIKKPILIIHGEVDDKVGLFPM-QAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 407 p~~~~~~~~~P~li~~G~~D~~v~~~~~-~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
....+.++++|+|+++|++|..+| +. ....+.+.+ .+++++++++++|.+.. +....+.+.+.+||++++.
T Consensus 210 ~~~~l~~i~~PvLiI~G~~D~~vp--~~~~~~~l~~~~----~~~~~~~i~gagH~~~~-e~p~~v~~~I~~FL~~~l~ 281 (456)
T 3vdx_A 210 FRADIPRIDVPALILHGTGDRTLP--IENTARVFHKAL----PSAEYVEVEGAPHGLLW-THAEEVNTALLAFLAKALE 281 (456)
T ss_dssp CTTTSTTCCSCCEEEEETTCSSSC--GGGTHHHHHHHC----TTSEEEEETTCCSCTTT-TTHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhCCCCEEEEEeCCCCCcC--HHHHHHHHHHHC----CCceEEEeCCCCCcchh-hCHHHHHHHHHHHHHHhhc
Confidence 334567789999999999999998 76 333333332 34789999999999764 6778899999999998764
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=99.76 E-value=4e-17 Score=150.82 Aligned_cols=214 Identities=16% Similarity=0.175 Sum_probs=136.4
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 308 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 308 (494)
+.+.||.++.+..+-|++ .|.||++||.+.+ ...| ......|+++||.|+++|.+
T Consensus 4 ~~~~~g~~l~y~~~g~~~--------~~~vvllHG~~~~-----------~~~w----~~~~~~L~~~g~~vi~~D~~-- 58 (276)
T 1zoi_A 4 VTTKDGVQIFYKDWGPRD--------APVIHFHHGWPLS-----------ADDW----DAQLLFFLAHGYRVVAHDRR-- 58 (276)
T ss_dssp EECTTSCEEEEEEESCTT--------SCEEEEECCTTCC-----------GGGG----HHHHHHHHHTTCEEEEECCT--
T ss_pred EECCCCcEEEEEecCCCC--------CCeEEEECCCCcc-----------hhHH----HHHHHHHHhCCCEEEEecCC--
Confidence 456789888877764432 3679999996421 1122 23455788899999996654
Q ss_pred CCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC-CCceeEEEeCCCCCCCCC--
Q 011049 309 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYNKTL-- 383 (494)
Q Consensus 309 ~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~-p~~~~a~v~~~~~~~~~~-- 383 (494)
|+|.+... ....+..++|+.+.++.+ + .+++.++|||+||.+++.+++.+ |++++++|+.++......
T Consensus 59 -G~G~S~~~~~~~~~~~~~~d~~~~l~~l---~---~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~ 131 (276)
T 1zoi_A 59 -GHGRSSQVWDGHDMDHYADDVAAVVAHL---G---IQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQT 131 (276)
T ss_dssp -TSTTSCCCSSCCSHHHHHHHHHHHHHHH---T---CTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCC
T ss_pred -CCCCCCCCCCCCCHHHHHHHHHHHHHHh---C---CCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCcccccc
Confidence 56655432 223466778888887776 2 36799999999999999988777 999999998876431100
Q ss_pred --CCCCccc------------------------c-cc-c----ccc--cHHH-------------------HHhcCcccc
Q 011049 384 --TPFGFQT------------------------E-FR-T----LWE--ATNV-------------------YIEMSPITH 410 (494)
Q Consensus 384 --~~~~~~~------------------------~-~~-~----~~~--~~~~-------------------~~~~sp~~~ 410 (494)
....... . .. . ... ..+. +...+....
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (276)
T 1zoi_A 132 PGNPGGLPKSVFDGFQAQVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTED 211 (276)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHH
T ss_pred ccccccccHHHHHHHHHHHHHhHHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhh
Confidence 0000000 0 00 0 000 0000 011122234
Q ss_pred ccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 411 ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 411 ~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
+.++++|+|+++|++|..+| +....+.+..+ -.+.+++++++++|... .+....+.+.+.+||.
T Consensus 212 l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 212 LKGIQQPVLVMHGDDDQIVP--YENSGVLSAKL---LPNGALKTYKGYPHGMP-TTHADVINADLLAFIR 275 (276)
T ss_dssp HHHCCSCEEEEEETTCSSSC--STTTHHHHHHH---STTEEEEEETTCCTTHH-HHTHHHHHHHHHHHHT
T ss_pred ccccCCCEEEEEcCCCcccC--hHHHHHHHHhh---CCCceEEEcCCCCCchh-hhCHHHHHHHHHHHhc
Confidence 56789999999999999987 66443333332 23579999999999876 3567788888999984
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.76 E-value=8.2e-19 Score=155.03 Aligned_cols=191 Identities=13% Similarity=0.080 Sum_probs=131.1
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
.+|.++.++.+.|++ ..+.|+||++||.+.. ...|... .....|+++||.|+.++.++ +
T Consensus 14 ~~g~~l~~~~~~p~~-----~~~~~~vv~~hG~~~~-----------~~~~~~~--~~~~~l~~~G~~v~~~d~~g---~ 72 (210)
T 1imj_A 14 VQGQALFFREALPGS-----GQARFSVLLLHGIRFS-----------SETWQNL--GTLHRLAQAGYRAVAIDLPG---L 72 (210)
T ss_dssp ETTEEECEEEEECSS-----SCCSCEEEECCCTTCC-----------HHHHHHH--THHHHHHHTTCEEEEECCTT---S
T ss_pred eCCeEEEEEEeCCCC-----CCCCceEEEECCCCCc-----------cceeecc--hhHHHHHHCCCeEEEecCCC---C
Confidence 488999999999875 1237999999997521 1112110 03557888999999977654 3
Q ss_pred CCCCCCc--hhHHHHH--HHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCC
Q 011049 312 GDKLPND--RFVEQLV--SSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG 387 (494)
Q Consensus 312 g~~~~~~--~~~~~~~--~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~ 387 (494)
|.+.... ....... .++...++.+ +.++++++|||+||.+++.++..+|++++++|+.+|.....
T Consensus 73 g~s~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~----- 141 (210)
T 1imj_A 73 GHSKEAAAPAPIGELAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK----- 141 (210)
T ss_dssp GGGTTSCCSSCTTSCCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG-----
T ss_pred CCCCCCCCcchhhhcchHHHHHHHHHHh------CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCcccc-----
Confidence 3332111 1112222 4555555544 24689999999999999999999999999999998864310
Q ss_pred cccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCccc
Q 011049 388 FQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAREN 467 (494)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 467 (494)
.....+.++++|+|+++|++|. ++ ...++.+ +. -.+.++.++++++|.+.. +.
T Consensus 142 ------------------~~~~~~~~~~~p~l~i~g~~D~-~~--~~~~~~~-~~----~~~~~~~~~~~~~H~~~~-~~ 194 (210)
T 1imj_A 142 ------------------INAANYASVKTPALIVYGDQDP-MG--QTSFEHL-KQ----LPNHRVLIMKGAGHPCYL-DK 194 (210)
T ss_dssp ------------------SCHHHHHTCCSCEEEEEETTCH-HH--HHHHHHH-TT----SSSEEEEEETTCCTTHHH-HC
T ss_pred ------------------ccchhhhhCCCCEEEEEcCccc-CC--HHHHHHH-hh----CCCCCEEEecCCCcchhh-cC
Confidence 0122345678999999999999 87 6665544 33 345899999999998652 44
Q ss_pred HHHHHHHHHHHHHH
Q 011049 468 VMHVIWETDRWLQK 481 (494)
Q Consensus 468 ~~~~~~~~~~fl~~ 481 (494)
...+.+.+.+||++
T Consensus 195 ~~~~~~~i~~fl~~ 208 (210)
T 1imj_A 195 PEEWHTGLLDFLQG 208 (210)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 55677888888875
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=99.76 E-value=3e-17 Score=153.73 Aligned_cols=216 Identities=10% Similarity=0.081 Sum_probs=141.4
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
.+|.++.+...-+ .|+||++||.+.+ ...|. .....|+++||.|++++.+ |+
T Consensus 16 ~~g~~l~~~~~g~----------~~~vv~~HG~~~~-----------~~~~~----~~~~~l~~~g~~v~~~d~~---G~ 67 (309)
T 3u1t_A 16 VEGATIAYVDEGS----------GQPVLFLHGNPTS-----------SYLWR----NIIPYVVAAGYRAVAPDLI---GM 67 (309)
T ss_dssp ETTEEEEEEEEEC----------SSEEEEECCTTCC-----------GGGGT----TTHHHHHHTTCEEEEECCT---TS
T ss_pred ECCeEEEEEEcCC----------CCEEEEECCCcch-----------hhhHH----HHHHHHHhCCCEEEEEccC---CC
Confidence 3787887665421 4789999997522 12232 2444668899999996665 45
Q ss_pred CCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcc
Q 011049 312 GDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQ 389 (494)
Q Consensus 312 g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~ 389 (494)
|.+... .....+.++|+.++++.+ + .+++.++|||+||.+++.++.++|++++++|++++..........+.
T Consensus 68 G~S~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 141 (309)
T 3u1t_A 68 GDSAKPDIEYRLQDHVAYMDGFIDAL---G---LDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYE 141 (309)
T ss_dssp TTSCCCSSCCCHHHHHHHHHHHHHHH---T---CCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSG
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHHc---C---CCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCcccccccc
Confidence 554332 233556677777776665 2 36899999999999999999999999999999887654221000000
Q ss_pred c--------------c----------------------ccccc--ccHHHHH-----------------hc---------
Q 011049 390 T--------------E----------------------FRTLW--EATNVYI-----------------EM--------- 405 (494)
Q Consensus 390 ~--------------~----------------------~~~~~--~~~~~~~-----------------~~--------- 405 (494)
. . ..... +..+.+. ..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (309)
T 3u1t_A 142 AMGPQLGPLFRDLRTADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFA 221 (309)
T ss_dssp GGHHHHHHHHHHHTSTTHHHHHHTTTCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHH
T ss_pred ccchhhhHHHHHHhccchhhhhccccceehhhhcccccccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchh
Confidence 0 0 00000 0000000 00
Q ss_pred -----CccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 406 -----SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 406 -----sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
+....+.++++|+|+++|++|..+| ...+.++.+.+. ..++.+++++||... .+....+.+.+.+||+
T Consensus 222 ~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~ 294 (309)
T 3u1t_A 222 EAEVLKNGEWLMASPIPKLLFHAEPGALAP--KPVVDYLSENVP----NLEVRFVGAGTHFLQ-EDHPHLIGQGIADWLR 294 (309)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHHHST----TEEEEEEEEESSCHH-HHCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhcccCCCCEEEEecCCCCCCC--HHHHHHHHhhCC----CCEEEEecCCcccch-hhCHHHHHHHHHHHHH
Confidence 1112246688999999999999988 887777777664 357777799999765 3567788899999999
Q ss_pred HhcCCCCC
Q 011049 481 KYCLSNTS 488 (494)
Q Consensus 481 ~~l~~~~~ 488 (494)
++..+...
T Consensus 295 ~~~~~~~~ 302 (309)
T 3u1t_A 295 RNKPHASL 302 (309)
T ss_dssp HHCCCCC-
T ss_pred hcchhhhh
Confidence 99876543
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.2e-17 Score=151.60 Aligned_cols=201 Identities=12% Similarity=0.133 Sum_probs=128.6
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC--chhHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAV 332 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~v 332 (494)
.|.||++||.+. +...|. .....|+++||.|+++|.+ |+|.+... ........+|+.+++
T Consensus 16 ~~~vvllHG~~~-----------~~~~~~----~~~~~L~~~g~~vi~~D~~---GhG~s~~~~~~~~~~~~~~d~~~~~ 77 (247)
T 1tqh_A 16 ERAVLLLHGFTG-----------NSADVR----MLGRFLESKGYTCHAPIYK---GHGVPPEELVHTGPDDWWQDVMNGY 77 (247)
T ss_dssp SCEEEEECCTTC-----------CTHHHH----HHHHHHHHTTCEEEECCCT---TSSSCHHHHTTCCHHHHHHHHHHHH
T ss_pred CcEEEEECCCCC-----------ChHHHH----HHHHHHHHCCCEEEecccC---CCCCCHHHhcCCCHHHHHHHHHHHH
Confidence 367899999642 111221 2445677899999996654 56644211 112345567777778
Q ss_pred HHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC-C--Ccc---cc----cc-cc------
Q 011049 333 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-F--GFQ---TE----FR-TL------ 395 (494)
Q Consensus 333 ~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~-~--~~~---~~----~~-~~------ 395 (494)
+++.+.+. +++.++||||||.+++.++.++| ++++|+.++........ . .+. .. .. ..
T Consensus 78 ~~l~~~~~---~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (247)
T 1tqh_A 78 EFLKNKGY---EKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQE 152 (247)
T ss_dssp HHHHHHTC---CCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHcCC---CeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhhHHHHHHHHHhhcccccchHHHHhh
Confidence 88877653 68999999999999999999998 77777654322110000 0 000 00 00 00
Q ss_pred --------cccHHHHHh--cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCc
Q 011049 396 --------WEATNVYIE--MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR 465 (494)
Q Consensus 396 --------~~~~~~~~~--~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~ 465 (494)
-.....+.. .+....+.++++|+|+++|++|..+| +..++.+++.+.. ..++++++++++|.....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p--~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e 228 (247)
T 1tqh_A 153 MEKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQARHDEMIN--PDSANIIYNEIES--PVKQIKWYEQSGHVITLD 228 (247)
T ss_dssp HHHHTTSCCTTHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSC--TTHHHHHHHHCCC--SSEEEEEETTCCSSGGGS
T ss_pred hhcccCCCHHHHHHHHHHHHHHHhhcccCCCCEEEEecCCCCCCC--cchHHHHHHhcCC--CceEEEEeCCCceeeccC
Confidence 000000000 12233567889999999999999998 8888888776643 347999999999997654
Q ss_pred ccHHHHHHHHHHHHHHh
Q 011049 466 ENVMHVIWETDRWLQKY 482 (494)
Q Consensus 466 ~~~~~~~~~~~~fl~~~ 482 (494)
...+.+.+.+.+||++.
T Consensus 229 ~~~~~~~~~i~~Fl~~~ 245 (247)
T 1tqh_A 229 QEKDQLHEDIYAFLESL 245 (247)
T ss_dssp TTHHHHHHHHHHHHHHS
T ss_pred ccHHHHHHHHHHHHHhc
Confidence 44678889999999863
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.4e-18 Score=169.73 Aligned_cols=233 Identities=15% Similarity=0.112 Sum_probs=150.8
Q ss_pred EEcCCCceEEEEEEeCCCC-CCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHH----hCCe---EE
Q 011049 229 YQRKDGVPLTATLYLPPGY-DQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL----ARRF---AV 300 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~-~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~G~---~v 300 (494)
+.+.||.++.+..+.|++. .+...++.|+||++||.+... ..|. .....|+ ..|| .|
T Consensus 25 ~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~-----------~~~~----~~~~~L~~~~~~~G~~~~~v 89 (398)
T 2y6u_A 25 LCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSK-----------VVWE----YYLPRLVAADAEGNYAIDKV 89 (398)
T ss_dssp SSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCG-----------GGGG----GGGGGSCCCBTTTTEEEEEE
T ss_pred ccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcH-----------HHHH----HHHHHHHHhhhhcCcceeEE
Confidence 5567999999999988651 011123468999999975321 1232 2233455 3489 99
Q ss_pred EeCCCCCCCCCCCCCC-------CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEE
Q 011049 301 LAGPSIPIIGEGDKLP-------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGI 373 (494)
Q Consensus 301 ~~~~~~~~~g~g~~~~-------~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v 373 (494)
+++|.+ |+|.+.. ......+.++|+.++++.+...-.+++.++.++|||+||.+++.++..+|++++++|
T Consensus 90 i~~D~~---G~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 166 (398)
T 2y6u_A 90 LLIDQV---NHGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLI 166 (398)
T ss_dssp EEECCT---TSHHHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEE
T ss_pred EEEcCC---CCCCCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEE
Confidence 996665 4554421 122245667777777776532112344569999999999999999999999999999
Q ss_pred eCCCCCCCCC--------CCCC---ccc--------ccccc----------------cc--cH---HHHHh---------
Q 011049 374 ARSGSYNKTL--------TPFG---FQT--------EFRTL----------------WE--AT---NVYIE--------- 404 (494)
Q Consensus 374 ~~~~~~~~~~--------~~~~---~~~--------~~~~~----------------~~--~~---~~~~~--------- 404 (494)
+++|...... .... +.. ..... +. .+ +.+..
T Consensus 167 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (398)
T 2y6u_A 167 LIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGD 246 (398)
T ss_dssp EESCCCSCCCCCSCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC----
T ss_pred EeccccccccccccccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCcccccc
Confidence 9998765311 0000 000 00000 00 00 01110
Q ss_pred ---------------------------cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 011049 405 ---------------------------MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPF 457 (494)
Q Consensus 405 ---------------------------~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 457 (494)
.+....+.++++|+|+++|++|..+| +..++.+.+.+. .++++++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~--~~~~~~l~~~~~----~~~~~~~~~ 320 (398)
T 2y6u_A 247 DEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCP--PQNQLFLQKTLQ----NYHLDVIPG 320 (398)
T ss_dssp ----CCEEESSCHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSC--HHHHHHHHHHCS----SEEEEEETT
T ss_pred ccCCCceEecCCchhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCC--HHHHHHHHHhCC----CceEEEeCC
Confidence 01123467789999999999999998 888777776653 479999999
Q ss_pred CCCccCCcccHHHHHHHHHHHHHHhcCCC
Q 011049 458 EHHVYAARENVMHVIWETDRWLQKYCLSN 486 (494)
Q Consensus 458 ~~H~~~~~~~~~~~~~~~~~fl~~~l~~~ 486 (494)
+||.+.. +....+.+.+.+||.+++...
T Consensus 321 ~gH~~~~-e~p~~~~~~i~~fl~~~~~~~ 348 (398)
T 2y6u_A 321 GSHLVNV-EAPDLVIERINHHIHEFVLTS 348 (398)
T ss_dssp CCTTHHH-HSHHHHHHHHHHHHHHHHHHS
T ss_pred CCccchh-cCHHHHHHHHHHHHHHHHHhH
Confidence 9998653 567788899999999987643
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=7.5e-17 Score=156.37 Aligned_cols=256 Identities=14% Similarity=0.125 Sum_probs=156.1
Q ss_pred cccEEEEEEcCC--Cc--eEEEEEEeCCCCCCCCCCCCcEEEEecCCCc--CCcccCCcccCCCCc-c--C-CCCchhHH
Q 011049 222 LQKEMIKYQRKD--GV--PLTATLYLPPGYDQSKDGPLPCLFWAYPEDY--KSKDAAGQVRGSPNE-F--S-GMTPTSSL 291 (494)
Q Consensus 222 ~~~~~~~~~~~d--g~--~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~--~~~~~~~~~~~~~~~-~--~-~~~~~~~~ 291 (494)
.+..+|.|.+.| |. ...+.++.|.+.. .+.|+|.|.||.-. ..|.++......... . . .+......
T Consensus 73 ~~a~ri~Y~std~~G~p~~~~gtv~~P~~~~----~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~ 148 (462)
T 3guu_A 73 AASFQLQYRTTNTQNEAVADVATVWIPAKPA----SPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIII 148 (462)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEEECSSCC----SSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHH
T ss_pred ceEEEEEEEEECCCCCEEEEEEEEEecCCCC----CCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHH
Confidence 356778887765 43 3889999998742 23899999998531 122222111111000 0 0 00112244
Q ss_pred HH-HhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCC----
Q 011049 292 IF-LARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP---- 366 (494)
Q Consensus 292 ~l-~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p---- 366 (494)
.| +++||+|+.+|+.| .|..+.........+.|..+++..+. +.-...+++++|||+||..+++++...|
T Consensus 149 ~~~l~~G~~Vv~~Dy~G---~G~~y~~~~~~~~~vlD~vrAa~~~~--~~~~~~~v~l~G~S~GG~aal~aa~~~~~yap 223 (462)
T 3guu_A 149 GWALQQGYYVVSSDHEG---FKAAFIAGYEEGMAILDGIRALKNYQ--NLPSDSKVALEGYSGGAHATVWATSLAESYAP 223 (462)
T ss_dssp HHHHHTTCEEEEECTTT---TTTCTTCHHHHHHHHHHHHHHHHHHT--TCCTTCEEEEEEETHHHHHHHHHHHHHHHHCT
T ss_pred HHHHhCCCEEEEecCCC---CCCcccCCcchhHHHHHHHHHHHHhc--cCCCCCCEEEEeeCccHHHHHHHHHhChhhcC
Confidence 66 89999999977764 44444433332223334444433332 3223479999999999999998887543
Q ss_pred C-ceeEEEeCCCCCCCCC-------CCC----------------Ccc-------------------cc--c---------
Q 011049 367 H-LFCCGIARSGSYNKTL-------TPF----------------GFQ-------------------TE--F--------- 392 (494)
Q Consensus 367 ~-~~~a~v~~~~~~~~~~-------~~~----------------~~~-------------------~~--~--------- 392 (494)
+ .++++++.++..|... ..+ .+. .. .
T Consensus 224 el~~~g~~~~~~p~dl~~~~~~~~~~~~~g~~~~~l~Gl~~~yP~l~~~l~~~lt~~g~~~~~~~~~~~~C~~~~~~~~~ 303 (462)
T 3guu_A 224 ELNIVGASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCLPQVVLTYP 303 (462)
T ss_dssp TSEEEEEEEESCCCBHHHHHHHHTTSTTHHHHHHHHHHHHHHCHHHHHHHHTTBCHHHHHHHHHHTSTTCCHHHHHHHCT
T ss_pred ccceEEEEEecCCCCHHHHHHHhccchhHHHHHHHHHhHHhhCcchhHHHHHHhCHHHHHHHHHHHhcCcchHHHHHhhc
Confidence 3 5888888887765100 000 000 00 0
Q ss_pred ----------ccccccH---HHHHhcCccc-----cccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEE
Q 011049 393 ----------RTLWEAT---NVYIEMSPIT-----HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVL 454 (494)
Q Consensus 393 ----------~~~~~~~---~~~~~~sp~~-----~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~ 454 (494)
......+ +.+.+.+... -..+.++|+||+||++|.+|| +.+++++++++++.|.++++++
T Consensus 304 ~~~~~~~~~~~~~~~~p~~~~~l~~~~lg~~~~~~g~~~~~~PvlI~hG~~D~vVP--~~~s~~l~~~l~~~G~~V~~~~ 381 (462)
T 3guu_A 304 FLNVFSLVNDTNLLNEAPIASILKQETVVQAEASYTVSVPKFPRFIWHAIPDEIVP--YQPAATYVKEQCAKGANINFSP 381 (462)
T ss_dssp TCCGGGGBSCTTGGGSTTHHHHHHHSBCCTTTCSSCCCCCCSEEEEEEETTCSSSC--HHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCHHHHcCCCccccCHHHHHHHHhhcccccccccCCCCCCCCEEEEeCCCCCcCC--HHHHHHHHHHHHHcCCCeEEEE
Confidence 0000000 1111111100 123457999999999999998 9999999999999999999999
Q ss_pred cCCCCCccCCcccHHHHHHHHHHHHHHhcCCCCCCCC-CC
Q 011049 455 LPFEHHVYAARENVMHVIWETDRWLQKYCLSNTSDGK-CG 493 (494)
Q Consensus 455 ~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~~~~~-~~ 493 (494)
|++++|..... ..+..+++||++++.+. .... |+
T Consensus 382 y~~~~H~~~~~----~~~~d~l~WL~~r~~G~-~~~~~C~ 416 (462)
T 3guu_A 382 YPIAEHLTAEI----FGLVPSLWFIKQAFDGT-TPKVICG 416 (462)
T ss_dssp ESSCCHHHHHH----HTHHHHHHHHHHHHHTC-CCCCCTT
T ss_pred ECcCCccCchh----hhHHHHHHHHHHHhCCC-CCCCCCC
Confidence 99999986421 33678899999999877 4444 75
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.6e-17 Score=154.51 Aligned_cols=217 Identities=12% Similarity=0.016 Sum_probs=135.0
Q ss_pred EEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCC
Q 011049 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 304 (494)
Q Consensus 225 ~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 304 (494)
+...++. +|.++.++..-++ ..|+||++||++.+ ...|. .....|++ ||.|+++|
T Consensus 46 ~~~~v~~-~~~~~~~~~~g~~--------~~~~vv~lHG~~~~-----------~~~~~----~~~~~L~~-g~~vi~~D 100 (306)
T 2r11_A 46 KSFYIST-RFGQTHVIASGPE--------DAPPLVLLHGALFS-----------STMWY----PNIADWSS-KYRTYAVD 100 (306)
T ss_dssp EEEEECC-TTEEEEEEEESCT--------TSCEEEEECCTTTC-----------GGGGT----TTHHHHHH-HSEEEEEC
T ss_pred ceEEEec-CCceEEEEeeCCC--------CCCeEEEECCCCCC-----------HHHHH----HHHHHHhc-CCEEEEec
Confidence 4444554 4557766664332 15889999997522 12232 23445665 99999977
Q ss_pred CCCCCCCCCCCC--CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCC
Q 011049 305 SIPIIGEGDKLP--NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT 382 (494)
Q Consensus 305 ~~~~~g~g~~~~--~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~ 382 (494)
.+|.. |.+.. ......+..+|+.++++.+ +.+++.++|||+||.+++.++..+|++++++|+++|.....
T Consensus 101 ~~G~g--G~s~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 172 (306)
T 2r11_A 101 IIGDK--NKSIPENVSGTRTDYANWLLDVFDNL------GIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFL 172 (306)
T ss_dssp CTTSS--SSCEECSCCCCHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTS
T ss_pred CCCCC--CCCCCCCCCCCHHHHHHHHHHHHHhc------CCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccC
Confidence 65432 33322 2223455566666665543 23689999999999999999999999999999999876532
Q ss_pred CCCCCccc-----------cc------cccc-c-----cHHH-----------HH-------hcCccccccCCCCCEEEE
Q 011049 383 LTPFGFQT-----------EF------RTLW-E-----ATNV-----------YI-------EMSPITHANKIKKPILII 421 (494)
Q Consensus 383 ~~~~~~~~-----------~~------~~~~-~-----~~~~-----------~~-------~~sp~~~~~~~~~P~li~ 421 (494)
........ .. .... . .... +. .......+.++++|+|++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii 252 (306)
T 2r11_A 173 PFHHDFYKYALGLTASNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELRSARVPILLL 252 (306)
T ss_dssp CCCHHHHHHHHTTTSTTHHHHHHHHHTTTCCCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHHTCCSCEEEE
T ss_pred cccHHHHHHHhHHHHHHHHHHHHHHhhCCccccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHHHHhcCCCCEEEE
Confidence 11100000 00 0000 0 0000 00 001223456788999999
Q ss_pred ecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 422 HGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 422 ~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
+|++|..+| ...+.++++.+. .+++++++++++|.+. .+....+.+.+.+||+
T Consensus 253 ~G~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 305 (306)
T 2r11_A 253 LGEHEVIYD--PHSALHRASSFV---PDIEAEVIKNAGHVLS-MEQPTYVNERVMRFFN 305 (306)
T ss_dssp EETTCCSSC--HHHHHHHHHHHS---TTCEEEEETTCCTTHH-HHSHHHHHHHHHHHHC
T ss_pred EeCCCcccC--HHHHHHHHHHHC---CCCEEEEeCCCCCCCc-ccCHHHHHHHHHHHHh
Confidence 999999987 777765655432 3478999999999865 3556677888888875
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.75 E-value=7.7e-17 Score=147.25 Aligned_cols=206 Identities=15% Similarity=0.054 Sum_probs=135.1
Q ss_pred EEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC
Q 011049 228 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 307 (494)
Q Consensus 228 ~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~ 307 (494)
++.+.||.++.+...-+ .|+||++||.+.+ ...| ......|+ +||.|+.++.+
T Consensus 6 ~~~~~~g~~l~~~~~g~----------~~~vv~lHG~~~~-----------~~~~----~~~~~~l~-~~~~vi~~d~~- 58 (262)
T 3r0v_A 6 TVPSSDGTPIAFERSGS----------GPPVVLVGGALST-----------RAGG----APLAERLA-PHFTVICYDRR- 58 (262)
T ss_dssp EEECTTSCEEEEEEEEC----------SSEEEEECCTTCC-----------GGGG----HHHHHHHT-TTSEEEEECCT-
T ss_pred eEEcCCCcEEEEEEcCC----------CCcEEEECCCCcC-----------hHHH----HHHHHHHh-cCcEEEEEecC-
Confidence 45668898888766521 4679999997522 1112 12344455 99999996665
Q ss_pred CCCCCCCCCC-chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCC
Q 011049 308 IIGEGDKLPN-DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF 386 (494)
Q Consensus 308 ~~g~g~~~~~-~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~ 386 (494)
|+|.+... ....++.++|+.++++.+ + +++.++|||+||.+++.++.++| +++++|+.+|.........
T Consensus 59 --G~G~S~~~~~~~~~~~~~~~~~~~~~l------~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~ 128 (262)
T 3r0v_A 59 --GRGDSGDTPPYAVEREIEDLAAIIDAA------G-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRP 128 (262)
T ss_dssp --TSTTCCCCSSCCHHHHHHHHHHHHHHT------T-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSC
T ss_pred --CCcCCCCCCCCCHHHHHHHHHHHHHhc------C-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccc
Confidence 45555332 222456667776666654 3 68999999999999999999999 9999999988755321110
Q ss_pred Ccccc-------------------------cccccccHHHHH------------------------hcCccccccCCCCC
Q 011049 387 GFQTE-------------------------FRTLWEATNVYI------------------------EMSPITHANKIKKP 417 (494)
Q Consensus 387 ~~~~~-------------------------~~~~~~~~~~~~------------------------~~sp~~~~~~~~~P 417 (494)
..... ...+.+..+.+. ...+...+.++++|
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 208 (262)
T 3r0v_A 129 PVPPDYQTRLDALLAEGRRGDAVTYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIP 208 (262)
T ss_dssp CCCTTHHHHHHHHHHTTCHHHHHHHHHHHTSCCCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSC
T ss_pred hhhhHHHHHHHHHhhccchhhHHHHHhhcccCCCHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCC
Confidence 00000 000000000000 01234456788999
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 418 ILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 418 ~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
+|+++|++|..+| ...+.++.+.+. .++++++++++|. +....+.+.+.+||+
T Consensus 209 ~lii~G~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~----~~p~~~~~~i~~fl~ 261 (262)
T 3r0v_A 209 TLVMDGGASPAWI--RHTAQELADTIP----NARYVTLENQTHT----VAPDAIAPVLVEFFT 261 (262)
T ss_dssp EEEEECTTCCHHH--HHHHHHHHHHST----TEEEEECCCSSSS----CCHHHHHHHHHHHHC
T ss_pred EEEEeecCCCCCC--HHHHHHHHHhCC----CCeEEEecCCCcc----cCHHHHHHHHHHHHh
Confidence 9999999999987 777777776653 4789999999992 456778888888885
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.75 E-value=8.1e-17 Score=148.40 Aligned_cols=212 Identities=16% Similarity=0.174 Sum_probs=133.6
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 308 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 308 (494)
+++.||.++.+..+- + .|.||++||.+.+ ...| ......|+++||.|+++|.+
T Consensus 3 ~~~~~g~~l~y~~~g--------~--~~~vvllHG~~~~-----------~~~~----~~~~~~L~~~g~~vi~~D~~-- 55 (273)
T 1a8s_A 3 FTTRDGTQIYYKDWG--------S--GQPIVFSHGWPLN-----------ADSW----ESQMIFLAAQGYRVIAHDRR-- 55 (273)
T ss_dssp EECTTSCEEEEEEES--------C--SSEEEEECCTTCC-----------GGGG----HHHHHHHHHTTCEEEEECCT--
T ss_pred EecCCCcEEEEEEcC--------C--CCEEEEECCCCCc-----------HHHH----hhHHhhHhhCCcEEEEECCC--
Confidence 566788888765541 1 3679999996521 1122 23445788899999996655
Q ss_pred CCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC-CCceeEEEeCCCCCCCCC--
Q 011049 309 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYNKTL-- 383 (494)
Q Consensus 309 ~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~-p~~~~a~v~~~~~~~~~~-- 383 (494)
|+|.+... ....+..++|+.++++.+ +.+++.++|||+||.+++.+++.+ |++++++|++++......
T Consensus 56 -G~G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~ 128 (273)
T 1a8s_A 56 -GHGRSSQPWSGNDMDTYADDLAQLIEHL------DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKT 128 (273)
T ss_dssp -TSTTSCCCSSCCSHHHHHHHHHHHHHHT------TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCC
T ss_pred -CCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccC
Confidence 55555322 223456677877777664 346899999999999998877665 899999998876421100
Q ss_pred --CCCCcccc-------------------------cc-c-----c--------cc-----cH-------HHHHhcCcccc
Q 011049 384 --TPFGFQTE-------------------------FR-T-----L--------WE-----AT-------NVYIEMSPITH 410 (494)
Q Consensus 384 --~~~~~~~~-------------------------~~-~-----~--------~~-----~~-------~~~~~~sp~~~ 410 (494)
........ .. . . |. .. ..+...+....
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (273)
T 1a8s_A 129 EANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTED 208 (273)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHH
T ss_pred ccccccCcHHHHHHHHHHhHhhHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhh
Confidence 00000000 00 0 0 00 00 00111222334
Q ss_pred ccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 411 ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 411 ~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
+.++++|+|+++|++|..+| +....+....+. .+.+++++++++|.+. .+..+.+.+.+.+||.
T Consensus 209 l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 272 (273)
T 1a8s_A 209 LKKIDVPTLVVHGDADQVVP--IEASGIASAALV---KGSTLKIYSGAPHGLT-DTHKDQLNADLLAFIK 272 (273)
T ss_dssp HHTCCSCEEEEEETTCSSSC--STTTHHHHHHHS---TTCEEEEETTCCSCHH-HHTHHHHHHHHHHHHH
T ss_pred hhcCCCCEEEEECCCCccCC--hHHHHHHHHHhC---CCcEEEEeCCCCCcch-hhCHHHHHHHHHHHHh
Confidence 66889999999999999987 664433333332 2468999999999875 3567788888999985
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=99.75 E-value=3.8e-17 Score=148.96 Aligned_cols=209 Identities=19% Similarity=0.136 Sum_probs=129.0
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
.+|.++.+...-+ . .|.||++||.+.+. ...| ......|+++||.|+++|.+ |+
T Consensus 9 ~~g~~l~~~~~g~-------~--~~~vvllHG~~~~~----------~~~~----~~~~~~l~~~g~~vi~~D~~---G~ 62 (254)
T 2ocg_A 9 VNGVQLHYQQTGE-------G--DHAVLLLPGMLGSG----------ETDF----GPQLKNLNKKLFTVVAWDPR---GY 62 (254)
T ss_dssp ETTEEEEEEEEEC-------C--SEEEEEECCTTCCH----------HHHC----HHHHHHSCTTTEEEEEECCT---TS
T ss_pred ECCEEEEEEEecC-------C--CCeEEEECCCCCCC----------ccch----HHHHHHHhhCCCeEEEECCC---CC
Confidence 4787777655421 1 36799999953110 0112 12445667789999996665 45
Q ss_pred CCCCCCc-----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC---
Q 011049 312 GDKLPND-----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL--- 383 (494)
Q Consensus 312 g~~~~~~-----~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~--- 383 (494)
|.+.... ......++|+ ++++.+.+ .+++.++|||+||.+++.++.++|++++++|+.++......
T Consensus 63 G~S~~~~~~~~~~~~~~~~~~~---~~~l~~l~---~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 136 (254)
T 2ocg_A 63 GHSRPPDRDFPADFFERDAKDA---VDLMKALK---FKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDS 136 (254)
T ss_dssp TTCCSSCCCCCTTHHHHHHHHH---HHHHHHTT---CSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHH
T ss_pred CCCCCCCCCCChHHHHHHHHHH---HHHHHHhC---CCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhH
Confidence 5543221 1123334444 44444444 36899999999999999999999999999999876432100
Q ss_pred ------CCC-Cccccccc-------------cccc-HHHHHh-------cCccccccCCCCCEEEEecCCCCCCCCCHHH
Q 011049 384 ------TPF-GFQTEFRT-------------LWEA-TNVYIE-------MSPITHANKIKKPILIIHGEVDDKVGLFPMQ 435 (494)
Q Consensus 384 ------~~~-~~~~~~~~-------------~~~~-~~~~~~-------~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~ 435 (494)
... .+...... .|.. ...+.. ......+.++++|+|+++|++|..+| ...
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~ 214 (254)
T 2ocg_A 137 MIYEGIRDVSKWSERTRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVP--RFH 214 (254)
T ss_dssp HHHHTTSCGGGSCHHHHHHHHHHHCHHHHHHHHHHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSC--HHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHhcchhhHHHHHHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCC--HHH
Confidence 000 00000000 0000 000011 01233567889999999999999988 888
Q ss_pred HHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 436 AERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 436 ~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
++.+.+.+. ..+++++++++|.... +..+.+.+.+.+||
T Consensus 215 ~~~~~~~~~----~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl 253 (254)
T 2ocg_A 215 ADFIHKHVK----GSRLHLMPEGKHNLHL-RFADEFNKLAEDFL 253 (254)
T ss_dssp HHHHHHHST----TCEEEEETTCCTTHHH-HTHHHHHHHHHHHH
T ss_pred HHHHHHhCC----CCEEEEcCCCCCchhh-hCHHHHHHHHHHHh
Confidence 777776654 3589999999998763 56677888888887
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.75 E-value=5.8e-17 Score=156.10 Aligned_cols=234 Identities=13% Similarity=0.079 Sum_probs=141.9
Q ss_pred CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcc-cCC-CCccCCCCchhHHHHHhCCeEEEeCCCCCCCC
Q 011049 233 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQV-RGS-PNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 310 (494)
Q Consensus 233 dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g 310 (494)
+|.++.+..+-+++ +. ..|+||++||.+.+........ .+. ...|..... ....|+++||.|+++|.+|. +
T Consensus 29 ~g~~l~y~~~g~~~--~~---~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~l~~~g~~vi~~D~~G~-~ 101 (366)
T 2pl5_A 29 SPVVIAYETYGTLS--SS---KNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIG-PGKSFDTNQYFIICSNVIGG-C 101 (366)
T ss_dssp SSEEEEEEEEECCC--TT---SCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEE-TTSSEETTTCEEEEECCTTC-S
T ss_pred cCceeeEEeccCcC--CC---CCceEEEecccCCcccccccccccccccchHHhhcC-CcccccccccEEEEecCCCc-c
Confidence 44566666665542 11 1588999999763321000000 000 001221110 00124578999999777652 0
Q ss_pred CCCCCCC---------------chhHHHHHHHHHHHHHHHHHcCCCCCCcE-EEEecChHHHHHHHHHHhCCCceeEEEe
Q 011049 311 EGDKLPN---------------DRFVEQLVSSAEAAVEEVVRRGVADPSRI-AVGGHSYGAFMTAHLLAHAPHLFCCGIA 374 (494)
Q Consensus 311 ~g~~~~~---------------~~~~~~~~~d~~~~v~~l~~~~~~d~~ri-~i~G~S~GG~~a~~~~~~~p~~~~a~v~ 374 (494)
+|.+... ....++.++|+.++++.+ +.+++ .++|||+||.+++.++.++|++++++|+
T Consensus 102 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 175 (366)
T 2pl5_A 102 KGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESL------GIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIV 175 (366)
T ss_dssp SSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHT------TCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEE
T ss_pred cCCCCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHHc------CCceEEEEEEeCccHHHHHHHHHhCcHhhhheeE
Confidence 3333211 113455666666665543 34688 7999999999999999999999999999
Q ss_pred CCCCCCCCCC----------------CCC---c---------------------c-----cc----cc-----------c
Q 011049 375 RSGSYNKTLT----------------PFG---F---------------------Q-----TE----FR-----------T 394 (494)
Q Consensus 375 ~~~~~~~~~~----------------~~~---~---------------------~-----~~----~~-----------~ 394 (494)
+++....... .+. + . .. .. .
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (366)
T 2pl5_A 176 MASTAEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVG 255 (366)
T ss_dssp ESCCSBCCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSC
T ss_pred eccCccCCCccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHH
Confidence 9886542100 000 0 0 00 00 0
Q ss_pred cc-----------ccH-------HHHHhcCc------cccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcE
Q 011049 395 LW-----------EAT-------NVYIEMSP------ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALS 450 (494)
Q Consensus 395 ~~-----------~~~-------~~~~~~sp------~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~ 450 (494)
.+ ... ..+...+. ...+.++++|+|+++|++|..+| +..++++.+.+...+..+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~~~~~~~ 333 (366)
T 2pl5_A 256 SYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYP--PAQSREIVKSLEAADKRV 333 (366)
T ss_dssp GGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSC--HHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHhhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccC--HHHHHHHHHHhhhcccCe
Confidence 00 000 11111111 12567889999999999999998 999999999999877678
Q ss_pred EEEEc-CCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 451 RLVLL-PFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 451 ~~~~~-~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
+++++ +++||.... +....+.+.+.+||+++
T Consensus 334 ~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~~ 365 (366)
T 2pl5_A 334 FYVELQSGEGHDSFL-LKNPKQIEILKGFLENP 365 (366)
T ss_dssp EEEEECCCBSSGGGG-SCCHHHHHHHHHHHHCC
T ss_pred EEEEeCCCCCcchhh-cChhHHHHHHHHHHccC
Confidence 99999 899998764 55568888899998753
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=6.5e-17 Score=164.75 Aligned_cols=224 Identities=13% Similarity=0.047 Sum_probs=148.1
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEe
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 302 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 302 (494)
..+...+++.||.++.+...- +.|+||++||.+.+ ...|. .....|+++||.|++
T Consensus 236 ~~~~~~~~~~dg~~l~~~~~g----------~~p~vv~~HG~~~~-----------~~~~~----~~~~~l~~~G~~v~~ 290 (555)
T 3i28_A 236 DMSHGYVTVKPRVRLHFVELG----------SGPAVCLCHGFPES-----------WYSWR----YQIPALAQAGYRVLA 290 (555)
T ss_dssp GSEEEEEEEETTEEEEEEEEC----------SSSEEEEECCTTCC-----------GGGGT----THHHHHHHTTCEEEE
T ss_pred ccceeEEEeCCCcEEEEEEcC----------CCCEEEEEeCCCCc-----------hhHHH----HHHHHHHhCCCEEEE
Confidence 355666777799888876651 15899999997522 12232 345678889999999
Q ss_pred CCCCCCCCCCCCCCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC
Q 011049 303 GPSIPIIGEGDKLPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 303 ~~~~~~~g~g~~~~~~----~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 378 (494)
++.+ |+|.+.... ......++|+.+.++.+ +.+++.++|||+||.+++.++.++|++++++|++++.
T Consensus 291 ~D~~---G~G~S~~~~~~~~~~~~~~~~d~~~~~~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 361 (555)
T 3i28_A 291 MDMK---GYGESSAPPEIEEYCMEVLCKEMVTFLDKL------GLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTP 361 (555)
T ss_dssp ECCT---TSTTSCCCSCGGGGSHHHHHHHHHHHHHHH------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred ecCC---CCCCCCCCCCcccccHHHHHHHHHHHHHHc------CCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccC
Confidence 6665 455553321 22456677777777665 3468999999999999999999999999999988775
Q ss_pred CCCCCCCCCcc--------------------------------------ccc------------------------cccc
Q 011049 379 YNKTLTPFGFQ--------------------------------------TEF------------------------RTLW 396 (494)
Q Consensus 379 ~~~~~~~~~~~--------------------------------------~~~------------------------~~~~ 396 (494)
........... ... ....
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (555)
T 3i28_A 362 FIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRM 441 (555)
T ss_dssp CCCCCTTSCHHHHHHTCGGGHHHHHHHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTT
T ss_pred CCCCCcccchHHHHhcCCccchhHHhhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccc
Confidence 43211000000 000 0000
Q ss_pred ---ccHHHH----------------------HhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEE
Q 011049 397 ---EATNVY----------------------IEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSR 451 (494)
Q Consensus 397 ---~~~~~~----------------------~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~ 451 (494)
+....| ...+....+.++++|+|+++|++|..+| ...++.+.+.+ ..++
T Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~----~~~~ 515 (555)
T 3i28_A 442 VTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLV--PQMSQHMEDWI----PHLK 515 (555)
T ss_dssp CCHHHHHHHHHHHTTTTTHHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSC--GGGGTTGGGTC----TTCE
T ss_pred cCHHHHHHHHHHHhcccchhHHHHHHhccccchhhccccccccccCEEEEEeCCCCCcC--HHHHHHHHhhC----CCce
Confidence 000000 0012223345788999999999999998 77776666554 3468
Q ss_pred EEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCCCC
Q 011049 452 LVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 452 ~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~ 487 (494)
+++++++||.... +....+.+.+.+||++......
T Consensus 516 ~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~~~~~~~ 550 (555)
T 3i28_A 516 RGHIEDCGHWTQM-DKPTEVNQILIKWLDSDARNPP 550 (555)
T ss_dssp EEEETTCCSCHHH-HSHHHHHHHHHHHHHHHTCC--
T ss_pred EEEeCCCCCCcch-hCHHHHHHHHHHHHHhccCCCC
Confidence 9999999998653 5667888899999999886544
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.3e-16 Score=149.13 Aligned_cols=210 Identities=14% Similarity=0.074 Sum_probs=135.0
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
.||.++.+..+-|++ .|.||++||.+.+ ...| .......|+++||.|+++|.+ |+
T Consensus 8 ~~g~~l~y~~~G~~~--------~~~vvllHG~~~~-----------~~~w---~~~~~~~L~~~G~~vi~~D~r---G~ 62 (298)
T 1q0r_A 8 SGDVELWSDDFGDPA--------DPALLLVMGGNLS-----------ALGW---PDEFARRLADGGLHVIRYDHR---DT 62 (298)
T ss_dssp ETTEEEEEEEESCTT--------SCEEEEECCTTCC-----------GGGS---CHHHHHHHHTTTCEEEEECCT---TS
T ss_pred cCCeEEEEEeccCCC--------CCeEEEEcCCCCC-----------ccch---HHHHHHHHHhCCCEEEeeCCC---CC
Confidence 588888877664322 4689999996521 1112 112335778899999996654 55
Q ss_pred CCCCC----C-chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC-CC----
Q 011049 312 GDKLP----N-DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY-NK---- 381 (494)
Q Consensus 312 g~~~~----~-~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~-~~---- 381 (494)
|.+.. . ....+..++|+.+.++.+ +.+++.++|||+||.+++.++.++|++++++|++++.. ..
T Consensus 63 G~S~~~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 136 (298)
T 1q0r_A 63 GRSTTRDFAAHPYGFGELAADAVAVLDGW------GVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDA 136 (298)
T ss_dssp TTSCCCCTTTSCCCHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHH
T ss_pred CCCCCCCCCcCCcCHHHHHHHHHHHHHHh------CCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCccccc
Confidence 55543 1 123466677887777765 23689999999999999999999999999999887644 21
Q ss_pred -------------CCCCCC------ccc-----cc------------------ccccccH-------HHHHhc-------
Q 011049 382 -------------TLTPFG------FQT-----EF------------------RTLWEAT-------NVYIEM------- 405 (494)
Q Consensus 382 -------------~~~~~~------~~~-----~~------------------~~~~~~~-------~~~~~~------- 405 (494)
...... +.. .. ...+... ..+...
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (298)
T 1q0r_A 137 NIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEP 216 (298)
T ss_dssp HHHHHHHTCCCSSCSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCC
T ss_pred chhhhhhhhhhhcccccccHHHHHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchh
Confidence 000000 000 00 0000000 000000
Q ss_pred ----------Ccccc-ccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHH
Q 011049 406 ----------SPITH-ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWE 474 (494)
Q Consensus 406 ----------sp~~~-~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~ 474 (494)
+.... +.++++|+|+++|++|..+| +..++.+.+.+ ...++++++++|| +....+.+.
T Consensus 217 ~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~--~~~~~~~~~~~----p~~~~~~i~~~gH-----e~p~~~~~~ 285 (298)
T 1q0r_A 217 YAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAP--APHGKHLAGLI----PTARLAEIPGMGH-----ALPSSVHGP 285 (298)
T ss_dssp CGGGGCCCCCGGGGGGGGGCCSCEEEEEETTCSSSC--TTHHHHHHHTS----TTEEEEEETTCCS-----SCCGGGHHH
T ss_pred hhhhhhhcCcccccccccccCCCEEEEEeCCCccCC--HHHHHHHHHhC----CCCEEEEcCCCCC-----CCcHHHHHH
Confidence 01123 66789999999999999987 77776665544 3479999999999 223467888
Q ss_pred HHHHHHHhc
Q 011049 475 TDRWLQKYC 483 (494)
Q Consensus 475 ~~~fl~~~l 483 (494)
+.+||.+++
T Consensus 286 i~~fl~~~~ 294 (298)
T 1q0r_A 286 LAEVILAHT 294 (298)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998875
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.1e-16 Score=146.39 Aligned_cols=211 Identities=13% Similarity=0.069 Sum_probs=130.1
Q ss_pred EcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCC
Q 011049 230 QRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPII 309 (494)
Q Consensus 230 ~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~ 309 (494)
.+.+|.++.+... + . -|.||++||.+.+ ...|. .....|+++||.|+++|.+
T Consensus 12 ~~~~g~~l~y~~~---G-----~--g~~vvllHG~~~~-----------~~~w~----~~~~~l~~~g~~vi~~D~~--- 63 (281)
T 3fob_A 12 ENQAPIEIYYEDH---G-----T--GKPVVLIHGWPLS-----------GRSWE----YQVPALVEAGYRVITYDRR--- 63 (281)
T ss_dssp ETTEEEEEEEEEE---S-----S--SEEEEEECCTTCC-----------GGGGT----TTHHHHHHTTEEEEEECCT---
T ss_pred CCCCceEEEEEEC---C-----C--CCeEEEECCCCCc-----------HHHHH----HHHHHHHhCCCEEEEeCCC---
Confidence 3456666665543 1 1 3568889997522 12232 2345778899999996654
Q ss_pred CCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh-CCCceeEEEeCCCCCCCCC---
Q 011049 310 GEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH-APHLFCCGIARSGSYNKTL--- 383 (494)
Q Consensus 310 g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~-~p~~~~a~v~~~~~~~~~~--- 383 (494)
|+|.+... ....+...+|+.+.++.+ + .+++.++|||+||.+++.+++. .|++++.+|..++......
T Consensus 64 G~G~S~~~~~~~~~~~~a~dl~~ll~~l---~---~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 137 (281)
T 3fob_A 64 GFGKSSQPWEGYEYDTFTSDLHQLLEQL---E---LQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSE 137 (281)
T ss_dssp TSTTSCCCSSCCSHHHHHHHHHHHHHHT---T---CCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCS
T ss_pred CCCCCCCCccccCHHHHHHHHHHHHHHc---C---CCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccc
Confidence 56655332 223456677777776654 2 3689999999999877665554 5899999998776422110
Q ss_pred -CCCCccc-c------------------------cc----ccccc----------------------HHHHHhcCccccc
Q 011049 384 -TPFGFQT-E------------------------FR----TLWEA----------------------TNVYIEMSPITHA 411 (494)
Q Consensus 384 -~~~~~~~-~------------------------~~----~~~~~----------------------~~~~~~~sp~~~~ 411 (494)
.+..... . .. ..... ...+...+....+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l 217 (281)
T 3fob_A 138 DHPEGALDDATIETFKSGVINDRLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDL 217 (281)
T ss_dssp SSTTCSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHH
T ss_pred cccccccchhHHHHHHHHhhhhHHHHHHHHHHHhcccccccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhh
Confidence 0000000 0 00 00000 0011122333456
Q ss_pred cCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 412 NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 412 ~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
.++++|+|+++|++|..+| +..+.++.... -.+.++.+++++||... .+..+.+.+.+.+||+
T Consensus 218 ~~i~~P~Lii~G~~D~~~p--~~~~~~~~~~~---~p~~~~~~i~~~gH~~~-~e~p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 218 EKFNIPTLIIHGDSDATVP--FEYSGKLTHEA---IPNSKVALIKGGPHGLN-ATHAKEFNEALLLFLK 280 (281)
T ss_dssp TTCCSCEEEEEETTCSSSC--GGGTHHHHHHH---STTCEEEEETTCCTTHH-HHTHHHHHHHHHHHHC
T ss_pred hhcCCCEEEEecCCCCCcC--HHHHHHHHHHh---CCCceEEEeCCCCCchh-hhhHHHHHHHHHHHhh
Confidence 7899999999999999988 77553333222 23468999999999875 4677788888999884
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=5.8e-17 Score=147.76 Aligned_cols=198 Identities=9% Similarity=-0.021 Sum_probs=129.3
Q ss_pred cEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC---chhHHHHHHHHHHHH
Q 011049 256 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAV 332 (494)
Q Consensus 256 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v 332 (494)
|+||++||.+. +...|. .....|+++||.|+++|.+ |+|.+... .....+.++|+.+.+
T Consensus 5 ~~vv~lHG~~~-----------~~~~~~----~~~~~l~~~g~~vi~~D~~---G~G~S~~~~~~~~~~~~~~~~l~~~l 66 (258)
T 3dqz_A 5 HHFVLVHNAYH-----------GAWIWY----KLKPLLESAGHRVTAVELA---ASGIDPRPIQAVETVDEYSKPLIETL 66 (258)
T ss_dssp CEEEEECCTTC-----------CGGGGT----THHHHHHHTTCEEEEECCT---TSTTCSSCGGGCCSHHHHHHHHHHHH
T ss_pred CcEEEECCCCC-----------ccccHH----HHHHHHHhCCCEEEEecCC---CCcCCCCCCCccccHHHhHHHHHHHH
Confidence 88999999752 212232 3456788899999996654 55655432 123455566666555
Q ss_pred HHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCC-------------cccccc------
Q 011049 333 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG-------------FQTEFR------ 393 (494)
Q Consensus 333 ~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~-------------~~~~~~------ 393 (494)
+.+ + . .+++.++|||+||.+++.++.++|++++++|.+++.......... ......
T Consensus 67 ~~l---~-~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (258)
T 3dqz_A 67 KSL---P-E-NEEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRN 141 (258)
T ss_dssp HTS---C-T-TCCEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETT
T ss_pred HHh---c-c-cCceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhc
Confidence 543 2 1 378999999999999999999999999999988885432111100 000000
Q ss_pred ----cccc-------------cHHH-----------------HHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHH
Q 011049 394 ----TLWE-------------ATNV-----------------YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERF 439 (494)
Q Consensus 394 ----~~~~-------------~~~~-----------------~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~ 439 (494)
..+- ..+. +............++|+|+++|++|..+| +..++.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~ 219 (258)
T 3dqz_A 142 GTMSLLKMGPKFMKARLYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIP--CDFIRWM 219 (258)
T ss_dssp EEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSC--HHHHHHH
T ss_pred cChhhhhhhHHHHHHHhhccCCHHHHHHHHHhccCCchhhhhhhccccccccccccCCEEEEECCCCeeeC--HHHHHHH
Confidence 0000 0000 00012222222336899999999999988 8887777
Q ss_pred HHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 440 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 440 ~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
.+.+.. .++++++++||.... +....+.+.+.+|++++|
T Consensus 220 ~~~~~~----~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl~~~~ 258 (258)
T 3dqz_A 220 IDNFNV----SKVYEIDGGDHMVML-SKPQKLFDSLSAIATDYM 258 (258)
T ss_dssp HHHSCC----SCEEEETTCCSCHHH-HSHHHHHHHHHHHHHHTC
T ss_pred HHhCCc----ccEEEcCCCCCchhh-cChHHHHHHHHHHHHHhC
Confidence 776643 478999999998763 677788999999999875
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.6e-16 Score=145.94 Aligned_cols=212 Identities=19% Similarity=0.193 Sum_probs=137.8
Q ss_pred EEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC
Q 011049 228 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 307 (494)
Q Consensus 228 ~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~ 307 (494)
.+.+.||.++.+...-+.+ .|+||++||.+.+ ...|. .....|+ ++|.|+++|.+
T Consensus 8 ~~~~~~g~~l~y~~~G~~~--------~p~lvl~hG~~~~-----------~~~w~----~~~~~L~-~~~~vi~~D~r- 62 (266)
T 3om8_A 8 FLATSDGASLAYRLDGAAE--------KPLLALSNSIGTT-----------LHMWD----AQLPALT-RHFRVLRYDAR- 62 (266)
T ss_dssp EEECTTSCEEEEEEESCTT--------SCEEEEECCTTCC-----------GGGGG----GGHHHHH-TTCEEEEECCT-
T ss_pred EEeccCCcEEEEEecCCCC--------CCEEEEeCCCccC-----------HHHHH----HHHHHhh-cCcEEEEEcCC-
Confidence 3566899999887764422 5889999996521 12232 2333444 58999995554
Q ss_pred CCCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC
Q 011049 308 IIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP 385 (494)
Q Consensus 308 ~~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~ 385 (494)
|+|.+... ....+...+|+.+.++.+ + -+++.++||||||.+++.++.++|++++++|+.++........
T Consensus 63 --G~G~S~~~~~~~~~~~~a~dl~~~l~~l---~---~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~ 134 (266)
T 3om8_A 63 --GHGASSVPPGPYTLARLGEDVLELLDAL---E---VRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAA 134 (266)
T ss_dssp --TSTTSCCCCSCCCHHHHHHHHHHHHHHT---T---CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSH
T ss_pred --CCCCCCCCCCCCCHHHHHHHHHHHHHHh---C---CCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchh
Confidence 56665422 223456677777776654 3 3679999999999999999999999999999887643211000
Q ss_pred -C-----------Ccccc---ccccc-------ccH---HH-------------------HHhcCccccccCCCCCEEEE
Q 011049 386 -F-----------GFQTE---FRTLW-------EAT---NV-------------------YIEMSPITHANKIKKPILII 421 (494)
Q Consensus 386 -~-----------~~~~~---~~~~~-------~~~---~~-------------------~~~~sp~~~~~~~~~P~li~ 421 (494)
+ ..... ....| ..+ +. +...+....+.++++|+|++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi 214 (266)
T 3om8_A 135 QWDERIAAVLQAEDMSETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVI 214 (266)
T ss_dssp HHHHHHHHHHHCSSSHHHHHHHHHHHSCHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEE
T ss_pred HHHHHHHHHHccccHHHHHHHHHHHhcChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEE
Confidence 0 00000 00000 000 00 11112234567889999999
Q ss_pred ecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 422 HGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 422 ~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
+|++|..+| +..++.+.+.+.. .++++++ +||... .+..+.+.+.+.+||.
T Consensus 215 ~G~~D~~~~--~~~~~~l~~~ip~----a~~~~i~-~gH~~~-~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 215 AGAYDTVTA--ASHGELIAASIAG----ARLVTLP-AVHLSN-VEFPQAFEGAVLSFLG 265 (266)
T ss_dssp EETTCSSSC--HHHHHHHHHHSTT----CEEEEES-CCSCHH-HHCHHHHHHHHHHHHT
T ss_pred EeCCCCCCC--HHHHHHHHHhCCC----CEEEEeC-CCCCcc-ccCHHHHHHHHHHHhc
Confidence 999999987 8888877776653 5788887 799765 4677788888899884
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.9e-16 Score=144.77 Aligned_cols=213 Identities=14% Similarity=0.144 Sum_probs=133.4
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 308 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 308 (494)
+++.||.++.+..+- + .|.||++||.+.+ ...| ......|+++||.|+++|.+
T Consensus 3 ~~~~~g~~l~y~~~g--------~--g~~vvllHG~~~~-----------~~~w----~~~~~~l~~~g~~vi~~D~~-- 55 (274)
T 1a8q_A 3 CTTRDGVEIFYKDWG--------Q--GRPVVFIHGWPLN-----------GDAW----QDQLKAVVDAGYRGIAHDRR-- 55 (274)
T ss_dssp EECTTSCEEEEEEEC--------S--SSEEEEECCTTCC-----------GGGG----HHHHHHHHHTTCEEEEECCT--
T ss_pred EEccCCCEEEEEecC--------C--CceEEEECCCcch-----------HHHH----HHHHHHHHhCCCeEEEEcCC--
Confidence 456788888765541 1 3679999996421 1122 13445778899999996654
Q ss_pred CCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC-CCceeEEEeCCCCCCCCC--
Q 011049 309 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYNKTL-- 383 (494)
Q Consensus 309 ~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~-p~~~~a~v~~~~~~~~~~-- 383 (494)
|+|.+... ....+..++|+.+.++.+ +.+++.++||||||.+++.+++.+ |++++++|++++......
T Consensus 56 -G~G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~ 128 (274)
T 1a8q_A 56 -GHGHSTPVWDGYDFDTFADDLNDLLTDL------DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKS 128 (274)
T ss_dssp -TSTTSCCCSSCCSHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCC
T ss_pred -CCCCCCCCCCCCcHHHHHHHHHHHHHHc------CCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCcccccc
Confidence 55555322 223456677777777654 236899999999999998877665 899999998876421100
Q ss_pred --CCCCcccc------------------------cc-c-------------ccc-----cH-------HHHHhcCccccc
Q 011049 384 --TPFGFQTE------------------------FR-T-------------LWE-----AT-------NVYIEMSPITHA 411 (494)
Q Consensus 384 --~~~~~~~~------------------------~~-~-------------~~~-----~~-------~~~~~~sp~~~~ 411 (494)
........ .. . .|. .. ..+...+....+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (274)
T 1a8q_A 129 DKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDL 208 (274)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHH
T ss_pred ccCcccchHHHHHHHHHHhhccHHHHHHHhcccccccccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHh
Confidence 00000000 00 0 000 00 001112223346
Q ss_pred cCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCc-ccHHHHHHHHHHHHH
Q 011049 412 NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR-ENVMHVIWETDRWLQ 480 (494)
Q Consensus 412 ~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~-~~~~~~~~~~~~fl~ 480 (494)
.++++|+|+++|++|..+| +....+....+ ..+++++++++++|.+... +..+.+.+.+.+||.
T Consensus 209 ~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 209 KKFDIPTLVVHGDDDQVVP--IDATGRKSAQI---IPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp TTCCSCEEEEEETTCSSSC--GGGTHHHHHHH---STTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHT
T ss_pred hcCCCCEEEEecCcCCCCC--cHHHHHHHHhh---CCCceEEEECCCCCceecccCCHHHHHHHHHHHhc
Confidence 7889999999999999987 66444333332 2347899999999987742 167788888999984
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.74 E-value=7e-17 Score=150.09 Aligned_cols=213 Identities=17% Similarity=0.098 Sum_probs=139.0
Q ss_pred EEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCC-ccCCCCchhHHHHHhCCeEEEeCC
Q 011049 226 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPN-EFSGMTPTSSLIFLARRFAVLAGP 304 (494)
Q Consensus 226 ~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~G~~v~~~~ 304 (494)
+..+...+|.++.+..+-|++ .|.||++||.+.+ .. .|. .....| +.||.|+++|
T Consensus 4 ~~~~~~~~g~~l~~~~~G~~~--------~~~vvllHG~~~~-----------~~~~w~----~~~~~L-~~~~~vi~~D 59 (286)
T 2yys_A 4 EIGYVPVGEAELYVEDVGPVE--------GPALFVLHGGPGG-----------NAYVLR----EGLQDY-LEGFRVVYFD 59 (286)
T ss_dssp EEEEEECSSCEEEEEEESCTT--------SCEEEEECCTTTC-----------CSHHHH----HHHGGG-CTTSEEEEEC
T ss_pred ceeEEeECCEEEEEEeecCCC--------CCEEEEECCCCCc-----------chhHHH----HHHHHh-cCCCEEEEEC
Confidence 445556788899887775432 4789999997521 11 122 122234 5799999955
Q ss_pred CCCCCCCCCCCC-C----chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC
Q 011049 305 SIPIIGEGDKLP-N----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 379 (494)
Q Consensus 305 ~~~~~g~g~~~~-~----~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 379 (494)
.+ |+|.+.. . ....+..++|+.+.++.+ + .+++.++|||+||.+++.++.++|+ ++++|+.++..
T Consensus 60 l~---G~G~S~~~~~~~~~~~~~~~a~dl~~ll~~l---~---~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~ 129 (286)
T 2yys_A 60 QR---GSGRSLELPQDPRLFTVDALVEDTLLLAEAL---G---VERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWV 129 (286)
T ss_dssp CT---TSTTSCCCCSCGGGCCHHHHHHHHHHHHHHT---T---CCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCC
T ss_pred CC---CCCCCCCCccCcccCcHHHHHHHHHHHHHHh---C---CCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCcc
Confidence 54 5666643 2 223566777877777665 2 3689999999999999999999999 99999988764
Q ss_pred CCCC---CC------CC-------cccc--ccc---------cccc---------------------HHH--HH---hcC
Q 011049 380 NKTL---TP------FG-------FQTE--FRT---------LWEA---------------------TNV--YI---EMS 406 (494)
Q Consensus 380 ~~~~---~~------~~-------~~~~--~~~---------~~~~---------------------~~~--~~---~~s 406 (494)
.... .. +. +... ... .... ... +. ..+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (286)
T 2yys_A 130 NFPWLAARLAEAAGLAPLPDPEENLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLD 209 (286)
T ss_dssp BHHHHHHHHHHHTTCCCCSCHHHHHHHHHHHSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCB
T ss_pred CcHHHHHHHHHHhccccchhHHHHHHHHhccCChHHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCC
Confidence 2100 00 00 0000 000 0000 000 00 112
Q ss_pred ccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 407 PITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 407 p~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
....+.++++|+|+++|++|..+| .. ++.+.+ +.. .++++++++||.... +..+.+.+.+.+||.+
T Consensus 210 ~~~~l~~i~~P~lvi~G~~D~~~~--~~-~~~~~~-~~~----~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 275 (286)
T 2yys_A 210 YTPYLTPERRPLYVLVGERDGTSY--PY-AEEVAS-RLR----APIRVLPEAGHYLWI-DAPEAFEEAFKEALAA 275 (286)
T ss_dssp CGGGCCCCSSCEEEEEETTCTTTT--TT-HHHHHH-HHT----CCEEEETTCCSSHHH-HCHHHHHHHHHHHHHT
T ss_pred hhhhhhhcCCCEEEEEeCCCCcCC--Hh-HHHHHh-CCC----CCEEEeCCCCCCcCh-hhHHHHHHHHHHHHHh
Confidence 223466788999999999999987 77 878877 654 478899999998763 5677888999999976
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.7e-18 Score=147.59 Aligned_cols=183 Identities=11% Similarity=0.091 Sum_probs=110.8
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhC--CeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR--RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAV 332 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v 332 (494)
.|+||++||.. +++..+. .......+.++ +|.|++++.. |+| ++..++ +
T Consensus 2 mptIl~lHGf~-----------ss~~s~k--~~~l~~~~~~~~~~~~v~~pdl~---~~g---------~~~~~~----l 52 (202)
T 4fle_A 2 MSTLLYIHGFN-----------SSPSSAK--ATTFKSWLQQHHPHIEMQIPQLP---PYP---------AEAAEM----L 52 (202)
T ss_dssp -CEEEEECCTT-----------CCTTCHH--HHHHHHHHHHHCTTSEEECCCCC---SSH---------HHHHHH----H
T ss_pred CcEEEEeCCCC-----------CCCCccH--HHHHHHHHHHcCCCcEEEEeCCC---CCH---------HHHHHH----H
Confidence 38999999932 1111111 11123344554 5999986553 333 222333 3
Q ss_pred HHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCccc--cccccc--ccHHHHHhcCcc
Q 011049 333 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQT--EFRTLW--EATNVYIEMSPI 408 (494)
Q Consensus 333 ~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~sp~ 408 (494)
+.+++. .+.++|+|+|+|+||++|+.++.++|....+++...+..+.......... .....+ .........+..
T Consensus 53 ~~~~~~--~~~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (202)
T 4fle_A 53 ESIVMD--KAGQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGENQNPYTGQKYVLESRHIYDLKAMQ 130 (202)
T ss_dssp HHHHHH--HTTSCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEEEECTTTCCEEEECHHHHHHHHTTC
T ss_pred HHHHHh--cCCCcEEEEEEChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhhhccccccccccchHHHHHHHHhhh
Confidence 333332 23578999999999999999999999887776655543221000000000 000011 111112223444
Q ss_pred ccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 409 THANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 409 ~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
..+.++++|+|++||++|.+|| +.++.++++ ++++.+++|++|.+.. .+++++++.+||+
T Consensus 131 ~~~~~~~~P~LiihG~~D~~Vp--~~~s~~l~~-------~~~l~i~~g~~H~~~~---~~~~~~~I~~FL~ 190 (202)
T 4fle_A 131 IEKLESPDLLWLLQQTGDEVLD--YRQAVAYYT-------PCRQTVESGGNHAFVG---FDHYFSPIVTFLG 190 (202)
T ss_dssp CSSCSCGGGEEEEEETTCSSSC--HHHHHHHTT-------TSEEEEESSCCTTCTT---GGGGHHHHHHHHT
T ss_pred hhhhccCceEEEEEeCCCCCCC--HHHHHHHhh-------CCEEEEECCCCcCCCC---HHHHHHHHHHHHh
Confidence 5667788999999999999998 988877753 3689999999998753 3456788999986
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.7e-17 Score=150.29 Aligned_cols=207 Identities=12% Similarity=0.094 Sum_probs=131.3
Q ss_pred EEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCC
Q 011049 226 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPS 305 (494)
Q Consensus 226 ~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~ 305 (494)
...+. .+|.++.+..+-|++ .|+||++||.+.+ ...| ......|+++||.|+.++.
T Consensus 6 ~~~~~-~~g~~l~~~~~g~~~--------~~~vv~~hG~~~~-----------~~~~----~~~~~~l~~~G~~v~~~d~ 61 (286)
T 3qit_A 6 EKFLE-FGGNQICLCSWGSPE--------HPVVLCIHGILEQ-----------GLAW----QEVALPLAAQGYRVVAPDL 61 (286)
T ss_dssp EEEEE-ETTEEEEEEEESCTT--------SCEEEEECCTTCC-----------GGGG----HHHHHHHHHTTCEEEEECC
T ss_pred hheee-cCCceEEEeecCCCC--------CCEEEEECCCCcc-----------cchH----HHHHHHhhhcCeEEEEECC
Confidence 33344 588899998886543 5899999997522 1122 2345678899999999666
Q ss_pred CCCCCCCCCCCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCC
Q 011049 306 IPIIGEGDKLPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 381 (494)
Q Consensus 306 ~~~~g~g~~~~~~----~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~ 381 (494)
+ |+|.+.... ....+.++|+..+++.+ +.+++.++|||+||++++.++.++|++++++|++++....
T Consensus 62 ~---G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 132 (286)
T 3qit_A 62 F---GHGRSSHLEMVTSYSSLTFLAQIDRVIQEL------PDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPA 132 (286)
T ss_dssp T---TSTTSCCCSSGGGCSHHHHHHHHHHHHHHS------CSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCC
T ss_pred C---CCCCCCCCCCCCCcCHHHHHHHHHHHHHhc------CCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCC
Confidence 5 455443322 22345555655555443 3378999999999999999999999999999999987553
Q ss_pred CCCC-CC--------------------ccccc---------ccccc--cHHHH---------------------------
Q 011049 382 TLTP-FG--------------------FQTEF---------RTLWE--ATNVY--------------------------- 402 (494)
Q Consensus 382 ~~~~-~~--------------------~~~~~---------~~~~~--~~~~~--------------------------- 402 (494)
.... .. +.... ...+. ....+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (286)
T 3qit_A 133 EESKKESAVNQLTTCLDYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILG 212 (286)
T ss_dssp CC---CCHHHHHHHHHHHHTCCCCCCCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHT
T ss_pred ccccchhhhHHHHHHHHHHhccccccccccHHHHHHHhhcCCcccCHHHHHHHhhccccccccceeeeechhhhcccccc
Confidence 2211 00 00000 00000 00000
Q ss_pred ------HhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHH
Q 011049 403 ------IEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIW 473 (494)
Q Consensus 403 ------~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~ 473 (494)
...+....+.++++|+|+++|++|..+| ......+.+.+. .++++++++ ||.... +....+.+
T Consensus 213 ~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~g-gH~~~~-e~p~~~~~ 281 (286)
T 3qit_A 213 LNNLPGGRSQYLEMLKSIQVPTTLVYGDSSKLNR--PEDLQQQKMTMT----QAKRVFLSG-GHNLHI-DAAAALAS 281 (286)
T ss_dssp TTSCTTHHHHHHHHHHHCCSCEEEEEETTCCSSC--HHHHHHHHHHST----TSEEEEESS-SSCHHH-HTHHHHHH
T ss_pred ccccccchhHHHHHHhccCCCeEEEEeCCCcccC--HHHHHHHHHHCC----CCeEEEeeC-CchHhh-hChHHHHH
Confidence 1112223346789999999999999988 887777766654 358999999 998653 44434433
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=5.8e-17 Score=149.78 Aligned_cols=244 Identities=15% Similarity=0.164 Sum_probs=149.6
Q ss_pred ccEEEEEEcC-CCceEEEEEEeCCCCCCC---CCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCe
Q 011049 223 QKEMIKYQRK-DGVPLTATLYLPPGYDQS---KDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF 298 (494)
Q Consensus 223 ~~~~~~~~~~-dg~~~~~~l~~P~~~~~~---~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~ 298 (494)
+...+++.|. -|.++...+|+|+++... +..++|+|+++||.+ ++...|..... ....+...|.
T Consensus 13 ~~~~~~~~S~~l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~-----------~~~~~w~~~~~-~~~~~~~~~~ 80 (299)
T 4fol_A 13 RLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLT-----------CTPDNASEKAF-WQFQADKYGF 80 (299)
T ss_dssp EEEEEEEECTTTSSEEEEEEEECGGGGCC------CBCEEEEECCTT-----------CCHHHHHHHSC-HHHHHHHHTC
T ss_pred EEEEEEEECcccCCceEEEEEcCCCCCccccccCCCcCEEEEECCCC-----------CChHHHHHhch-HhHHHHHcCc
Confidence 4566777764 578999999999987532 234599999999964 22222322111 2224456788
Q ss_pred EEEeCCCCCC-------------CCCCCCC----------CCchhHHHHHHHHHHHHHHHHH----cCCCCCCcEEEEec
Q 011049 299 AVLAGPSIPI-------------IGEGDKL----------PNDRFVEQLVSSAEAAVEEVVR----RGVADPSRIAVGGH 351 (494)
Q Consensus 299 ~v~~~~~~~~-------------~g~g~~~----------~~~~~~~~~~~d~~~~v~~l~~----~~~~d~~ri~i~G~ 351 (494)
++++++..+. .|.+..+ ....+.....+++...|+.... +...++++.+|.|+
T Consensus 81 ~~v~p~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~ 160 (299)
T 4fol_A 81 AIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGI 160 (299)
T ss_dssp EEEEECSSCCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEB
T ss_pred hhhccCCCcceeecCCCcccccccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEec
Confidence 8887543211 0111110 0123344556666666654321 12235678999999
Q ss_pred ChHHHHHHHHHHhC--CCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccC---C-CCCEEEEecCC
Q 011049 352 SYGAFMTAHLLAHA--PHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANK---I-KKPILIIHGEV 425 (494)
Q Consensus 352 S~GG~~a~~~~~~~--p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~---~-~~P~li~~G~~ 425 (494)
||||+.|+.++.++ |.+|+++.+.+|..+.....+...........+...+...++...+.+ . ..++++-+|+.
T Consensus 161 SMGG~gAl~~al~~~~~~~~~~~~s~s~~~~p~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~~i~id~G~~ 240 (299)
T 4fol_A 161 SMGGYGAICGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGEEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDS 240 (299)
T ss_dssp THHHHHHHHHHHHTGGGTCCSEEEEESCCCCGGGSHHHHHHHHHHTC-----CGGGCHHHHGGGSCCCTTCCEEEEEETT
T ss_pred CchHHHHHHHHHhCCCCCceEEEEecccccCcccccccccccccccccchhhhhhcCHHHHHHhcccCCCCceEEEecCC
Confidence 99999999999985 678999999999876443333221111111122333444455443333 2 26799999999
Q ss_pred CCCCCCCHHH--HHHHHHHHHhCCCc--EEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 426 DDKVGLFPMQ--AERFFDALKGHGAL--SRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 426 D~~v~~~~~~--~~~~~~~l~~~g~~--~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
|.... .+ .+.+.+++++++.+ +++...||.+|.+.. +..+++.-++|..++|+
T Consensus 241 D~f~~---~~l~~~~f~~a~~~~g~~~~~~~r~~~GydHsy~f---~~~fi~dhl~fha~~Lg 297 (299)
T 4fol_A 241 DPFLE---EHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYF---VSTFVPEHAEFHARNLG 297 (299)
T ss_dssp CTTHH---HHTCTHHHHHHHTTSTTTTCEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHTT
T ss_pred Ccchh---hhcCHHHHHHHHHhcCCCceEEEEeCCCCCCCHHH---HHHHHHHHHHHHHHhcC
Confidence 98742 22 36789999998866 788999999998642 33556667888888875
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.73 E-value=3.9e-17 Score=150.39 Aligned_cols=206 Identities=14% Similarity=0.097 Sum_probs=130.2
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
.+|.++.+... + ..|+||++||.+.+ ...|... ...|++ ||.|++++.+ |+
T Consensus 10 ~~~~~~~y~~~---g-------~~~~vv~~HG~~~~-----------~~~~~~~----~~~L~~-~~~vi~~d~~---G~ 60 (278)
T 3oos_A 10 TPRGKFEYFLK---G-------EGPPLCVTHLYSEY-----------NDNGNTF----ANPFTD-HYSVYLVNLK---GC 60 (278)
T ss_dssp ETTEEEEEEEE---C-------SSSEEEECCSSEEC-----------CTTCCTT----TGGGGG-TSEEEEECCT---TS
T ss_pred cCCceEEEEec---C-------CCCeEEEEcCCCcc-----------hHHHHHH----HHHhhc-CceEEEEcCC---CC
Confidence 46667765543 1 14789999997532 1223322 223444 9999996665 55
Q ss_pred CCCCCC----chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC--
Q 011049 312 GDKLPN----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-- 385 (494)
Q Consensus 312 g~~~~~----~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~-- 385 (494)
|.+... ....++.++|+.+.++.+ +.+++.++|||+||.+++.++.++|++++++|+++|........
T Consensus 61 G~s~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~ 134 (278)
T 3oos_A 61 GNSDSAKNDSEYSMTETIKDLEAIREAL------YINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHK 134 (278)
T ss_dssp TTSCCCSSGGGGSHHHHHHHHHHHHHHT------TCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGST
T ss_pred CCCCCCCCcccCcHHHHHHHHHHHHHHh------CCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCcccccccccc
Confidence 555432 112455566665555543 33689999999999999999999999999999999876510000
Q ss_pred ---CCcccc-----------c-cc------------cc-------------------------ccHHHHH-----hcCcc
Q 011049 386 ---FGFQTE-----------F-RT------------LW-------------------------EATNVYI-----EMSPI 408 (494)
Q Consensus 386 ---~~~~~~-----------~-~~------------~~-------------------------~~~~~~~-----~~sp~ 408 (494)
...... . .. .| .....+. ..+..
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (278)
T 3oos_A 135 DSIYCSKNVKFNRIVSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVR 214 (278)
T ss_dssp TSTTSTTSTTHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCH
T ss_pred chhhhhhchhHHHHHHHHHhhcccccCchHHHHHHHHHhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHH
Confidence 000000 0 00 00 0000111 22333
Q ss_pred ccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 409 THANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 409 ~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
..+.++++|+|+++|++|..+| ...+.++.+.+. .++++++++++|.+.. +....+.+.+.+||
T Consensus 215 ~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl 278 (278)
T 3oos_A 215 QKLKFVKIPSFIYCGKHDVQCP--YIFSCEIANLIP----NATLTKFEESNHNPFV-EEIDKFNQFVNDTL 278 (278)
T ss_dssp HHHTTCCSCEEEEEETTCSSSC--HHHHHHHHHHST----TEEEEEETTCSSCHHH-HSHHHHHHHHHHTC
T ss_pred HHHhCCCCCEEEEEeccCCCCC--HHHHHHHHhhCC----CcEEEEcCCcCCCccc-ccHHHHHHHHHhhC
Confidence 4567889999999999999988 888877777663 4799999999998763 55666666666664
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.73 E-value=3.9e-17 Score=150.68 Aligned_cols=198 Identities=15% Similarity=0.110 Sum_probs=130.2
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCc----h--hHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND----R--FVEQLVSSA 328 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~----~--~~~~~~~d~ 328 (494)
.|+||++||.+.+ ...|. .....|++ ||.|++++.+ |+|.+.... . ..++.++|+
T Consensus 28 ~~~vv~lHG~~~~-----------~~~~~----~~~~~l~~-g~~v~~~d~~---G~G~s~~~~~~~~~~~~~~~~~~~~ 88 (282)
T 3qvm_A 28 EKTVLLAHGFGCD-----------QNMWR----FMLPELEK-QFTVIVFDYV---GSGQSDLESFSTKRYSSLEGYAKDV 88 (282)
T ss_dssp SCEEEEECCTTCC-----------GGGGT----TTHHHHHT-TSEEEECCCT---TSTTSCGGGCCTTGGGSHHHHHHHH
T ss_pred CCeEEEECCCCCC-----------cchHH----HHHHHHhc-CceEEEEecC---CCCCCCCCCCCccccccHHHHHHHH
Confidence 3899999996522 12232 23445555 9999996664 555553321 1 245556666
Q ss_pred HHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCccccc---------------c
Q 011049 329 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEF---------------R 393 (494)
Q Consensus 329 ~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~---------------~ 393 (494)
.+.++.+ +.+++.++|||+||.+++.++.++|++++++|+++|..........+.... .
T Consensus 89 ~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (282)
T 3qvm_A 89 EEILVAL------DLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNY 162 (282)
T ss_dssp HHHHHHT------TCCSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCH
T ss_pred HHHHHHc------CCCceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcch
Confidence 6665554 347899999999999999999999999999999998653211100000000 0
Q ss_pred ccc---------------------------ccH-------HHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHH
Q 011049 394 TLW---------------------------EAT-------NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERF 439 (494)
Q Consensus 394 ~~~---------------------------~~~-------~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~ 439 (494)
..| ..+ ..+...+....+.++++|+|+++|++|..+| ...+..+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~ 240 (282)
T 3qvm_A 163 IGWANYLAPLVMGASHSSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLAS--PEVGQYM 240 (282)
T ss_dssp HHHHHHHHHHHHCTTSCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCC--HHHHHHH
T ss_pred hhHHHHHHhhccCCccchhhHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCC--HHHHHHH
Confidence 000 000 0111123335567889999999999999988 8887777
Q ss_pred HHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 440 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 440 ~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
.+.+. ..+++++++++|.+.. +....+.+.+.+||+++..
T Consensus 241 ~~~~~----~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~~ 280 (282)
T 3qvm_A 241 AENIP----NSQLELIQAEGHCLHM-TDAGLITPLLIHFIQNNQT 280 (282)
T ss_dssp HHHSS----SEEEEEEEEESSCHHH-HCHHHHHHHHHHHHHHC--
T ss_pred HHhCC----CCcEEEecCCCCcccc-cCHHHHHHHHHHHHHhcCC
Confidence 76663 4699999999998753 5577888899999988643
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.73 E-value=6.8e-17 Score=156.11 Aligned_cols=72 Identities=11% Similarity=0.114 Sum_probs=61.9
Q ss_pred cccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCC-CCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 410 HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPF-EHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 410 ~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~-~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
.+.++++|+|+++|++|..+| +..++++++.+++.+.+++++++++ +||.... +....+.+.+.+||++++.
T Consensus 302 ~l~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~g~~~~~~~i~~~~gH~~~~-e~p~~~~~~i~~fl~~~~~ 374 (377)
T 3i1i_A 302 ALSNVEANVLMIPCKQDLLQP--SRYNYKMVDLLQKQGKYAEVYEIESINGHMAGV-FDIHLFEKKVYEFLNRKVS 374 (377)
T ss_dssp HHHTCCSEEEEECBTTCSSSC--THHHHHHHHHHHHTTCCEEECCBCCTTGGGHHH-HCGGGTHHHHHHHHHSCCS
T ss_pred HHhhCCCCEEEEecCCccccC--HHHHHHHHHHHHhcCCCceEEEcCCCCCCcchh-cCHHHHHHHHHHHHHhhhh
Confidence 456789999999999999988 8999999999988777899999998 9998653 4566788899999998764
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=99.73 E-value=7.4e-17 Score=150.34 Aligned_cols=214 Identities=20% Similarity=0.177 Sum_probs=134.6
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
.+|.++.+..+-+. .+ .|.||++||++.+. ..|. .....++++||.|+++|.+ |+
T Consensus 12 ~~g~~l~~~~~g~~----~~---~~~vvllHG~~~~~-----------~~~~----~~~~~l~~~g~~vi~~D~~---G~ 66 (293)
T 1mtz_A 12 VNGIYIYYKLCKAP----EE---KAKLMTMHGGPGMS-----------HDYL----LSLRDMTKEGITVLFYDQF---GC 66 (293)
T ss_dssp ETTEEEEEEEECCS----SC---SEEEEEECCTTTCC-----------SGGG----GGGGGGGGGTEEEEEECCT---TS
T ss_pred ECCEEEEEEEECCC----CC---CCeEEEEeCCCCcc-----------hhHH----HHHHHHHhcCcEEEEecCC---CC
Confidence 47777776665331 01 37799999964211 1111 1122446789999996654 56
Q ss_pred CCCCCCc---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC-----
Q 011049 312 GDKLPND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL----- 383 (494)
Q Consensus 312 g~~~~~~---~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~----- 383 (494)
|.+.... ...+..++|+.+.++.+. + .+++.++|||+||.+++.+|.++|++++++|+.++......
T Consensus 67 G~S~~~~~~~~~~~~~~~dl~~~~~~l~--~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 141 (293)
T 1mtz_A 67 GRSEEPDQSKFTIDYGVEEAEALRSKLF--G---NEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEM 141 (293)
T ss_dssp TTSCCCCGGGCSHHHHHHHHHHHHHHHH--T---TCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHH
T ss_pred ccCCCCCCCcccHHHHHHHHHHHHHHhc--C---CCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHH
Confidence 6554332 224566777777777652 2 25799999999999999999999999999999887643100
Q ss_pred ------CCCCc-------------ccc------------c---ccccccH--HH---------HH---------------
Q 011049 384 ------TPFGF-------------QTE------------F---RTLWEAT--NV---------YI--------------- 403 (494)
Q Consensus 384 ------~~~~~-------------~~~------------~---~~~~~~~--~~---------~~--------------- 403 (494)
..... ... . ...|... .. +.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (293)
T 1mtz_A 142 NRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIK 221 (293)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTT
T ss_pred HHHHHhcCHHHHHHHHHhhccCCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCcceeccccccc
Confidence 00000 000 0 0011000 00 10
Q ss_pred hcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 404 EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 404 ~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
..+....+.++++|+|+++|++| .++ +..+.++.+.+. ..++++++++||.... +..+.+.+.+.+||.+++
T Consensus 222 ~~~~~~~l~~i~~P~lii~G~~D-~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~~l 293 (293)
T 1mtz_A 222 DWDITDKISAIKIPTLITVGEYD-EVT--PNVARVIHEKIA----GSELHVFRDCSHLTMW-EDREGYNKLLSDFILKHL 293 (293)
T ss_dssp TCBCTTTGGGCCSCEEEEEETTC-SSC--HHHHHHHHHHST----TCEEEEETTCCSCHHH-HSHHHHHHHHHHHHHTCC
T ss_pred CCChhhhhccCCCCEEEEeeCCC-CCC--HHHHHHHHHhCC----CceEEEeCCCCCCccc-cCHHHHHHHHHHHHHhcC
Confidence 01122345678899999999999 665 777777666553 3689999999998753 567788889999998653
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-16 Score=146.93 Aligned_cols=197 Identities=19% Similarity=0.207 Sum_probs=128.7
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC---chhHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~ 331 (494)
.|+||++||.+. +...|. .....| +++|.|+++|.+ |+|.+... ....++.++|+.+.
T Consensus 15 ~~~vvllHG~~~-----------~~~~w~----~~~~~L-~~~~~vi~~Dl~---G~G~S~~~~~~~~~~~~~a~dl~~~ 75 (268)
T 3v48_A 15 APVVVLISGLGG-----------SGSYWL----PQLAVL-EQEYQVVCYDQR---GTGNNPDTLAEDYSIAQMAAELHQA 75 (268)
T ss_dssp CCEEEEECCTTC-----------CGGGGH----HHHHHH-HTTSEEEECCCT---TBTTBCCCCCTTCCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCc-----------cHHHHH----HHHHHH-hhcCeEEEECCC---CCCCCCCCccccCCHHHHHHHHHHH
Confidence 588999999652 112232 223344 567999995554 56655322 12345666776666
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC-CCcc---------------cc----
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-FGFQ---------------TE---- 391 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~-~~~~---------------~~---- 391 (494)
++.+ + .+++.++||||||.+++.++.++|++++++|++++........ ..+. ..
T Consensus 76 l~~l---~---~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (268)
T 3v48_A 76 LVAA---G---IEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLF 149 (268)
T ss_dssp HHHT---T---CCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHc---C---CCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhh
Confidence 5543 3 3679999999999999999999999999999988753211000 0000 00
Q ss_pred -ccccc-------------------ccH-------HHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 011049 392 -FRTLW-------------------EAT-------NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALK 444 (494)
Q Consensus 392 -~~~~~-------------------~~~-------~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~ 444 (494)
....| ... ..+...+....+.++++|+|+++|++|..+| ...++.+.+.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p--~~~~~~l~~~~p 227 (268)
T 3v48_A 150 LYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVP--TACSSELHAALP 227 (268)
T ss_dssp HSCHHHHHTTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSC--THHHHHHHHHCS
T ss_pred cCchhhhhcccccchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccC--HHHHHHHHHhCC
Confidence 00000 000 0111222334567899999999999999988 887777776653
Q ss_pred hCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 445 GHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 445 ~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
..++++++++||... .+..+.+.+.+.+||.+.+
T Consensus 228 ----~~~~~~~~~~GH~~~-~e~p~~~~~~i~~fl~~~~ 261 (268)
T 3v48_A 228 ----DSQKMVMPYGGHACN-VTDPETFNALLLNGLASLL 261 (268)
T ss_dssp ----SEEEEEESSCCTTHH-HHCHHHHHHHHHHHHHHHH
T ss_pred ----cCeEEEeCCCCcchh-hcCHHHHHHHHHHHHHHhc
Confidence 378999999999865 4777888999999998754
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.9e-16 Score=147.84 Aligned_cols=207 Identities=14% Similarity=0.095 Sum_probs=134.8
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
.+|..+.+...-+ .|+||++||.+.. ...|. .....|+ .||.|++++.+| +
T Consensus 55 ~~~~~~~~~~~g~----------~p~vv~lhG~~~~-----------~~~~~----~~~~~L~-~~~~v~~~D~~G---~ 105 (314)
T 3kxp_A 55 IGRITLNVREKGS----------GPLMLFFHGITSN-----------SAVFE----PLMIRLS-DRFTTIAVDQRG---H 105 (314)
T ss_dssp CSSCEEEEEEECC----------SSEEEEECCTTCC-----------GGGGH----HHHHTTT-TTSEEEEECCTT---S
T ss_pred ECCEEEEEEecCC----------CCEEEEECCCCCC-----------HHHHH----HHHHHHH-cCCeEEEEeCCC---c
Confidence 5777887765522 4789999997521 11121 2233444 479999977654 4
Q ss_pred CCCC--CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC-----
Q 011049 312 GDKL--PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT----- 384 (494)
Q Consensus 312 g~~~--~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~----- 384 (494)
|.+. ......++..+|+.++++++ +.++++++|||+||++++.++.++|++++++|+++|.......
T Consensus 106 G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 179 (314)
T 3kxp_A 106 GLSDKPETGYEANDYADDIAGLIRTL------ARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDAL 179 (314)
T ss_dssp TTSCCCSSCCSHHHHHHHHHHHHHHH------TSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh------CCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHH
Confidence 4442 22223456677777777665 2368999999999999999999999999999999875431100
Q ss_pred -------CCCccccc--------cccc---ccHHHHH---------------------------hcCccccccCCCCCEE
Q 011049 385 -------PFGFQTEF--------RTLW---EATNVYI---------------------------EMSPITHANKIKKPIL 419 (494)
Q Consensus 385 -------~~~~~~~~--------~~~~---~~~~~~~---------------------------~~sp~~~~~~~~~P~l 419 (494)
...+.... ..+. .....+. ..+....+.++++|+|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L 259 (314)
T 3kxp_A 180 EARVNAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVL 259 (314)
T ss_dssp HHHTTTTCSCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEE
T ss_pred HHHhhhchhhhcCHHHHHHHHHhhcccCchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEE
Confidence 00000000 0000 0000000 0134445667899999
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 420 IIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 420 i~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
+++|++|..+| ...+.++.+.+. .++++++++++|.+. .+....+.+.+.+||+
T Consensus 260 ii~G~~D~~~~--~~~~~~~~~~~~----~~~~~~~~g~gH~~~-~e~~~~~~~~i~~fl~ 313 (314)
T 3kxp_A 260 IVRGESSKLVS--AAALAKTSRLRP----DLPVVVVPGADHYVN-EVSPEITLKAITNFID 313 (314)
T ss_dssp EEEETTCSSSC--HHHHHHHHHHCT----TSCEEEETTCCSCHH-HHCHHHHHHHHHHHHH
T ss_pred EEecCCCccCC--HHHHHHHHHhCC----CceEEEcCCCCCcch-hhCHHHHHHHHHHHHh
Confidence 99999999998 888888877763 357899999999875 3556778888999986
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=99.72 E-value=2e-16 Score=146.17 Aligned_cols=209 Identities=14% Similarity=0.056 Sum_probs=135.1
Q ss_pred cCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCC
Q 011049 231 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 310 (494)
Q Consensus 231 ~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g 310 (494)
+.+|.++.+..+ + + .|.||++||.+.+ ...| ......|+++||.|+++|.+ |
T Consensus 9 ~~~g~~l~y~~~---g-----~--g~pvvllHG~~~~-----------~~~~----~~~~~~L~~~g~~vi~~D~~---G 60 (277)
T 1brt_A 9 NSTSIDLYYEDH---G-----T--GQPVVLIHGFPLS-----------GHSW----ERQSAALLDAGYRVITYDRR---G 60 (277)
T ss_dssp TTEEEEEEEEEE---C-----S--SSEEEEECCTTCC-----------GGGG----HHHHHHHHHTTCEEEEECCT---T
T ss_pred cCCCcEEEEEEc---C-----C--CCeEEEECCCCCc-----------HHHH----HHHHHHHhhCCCEEEEeCCC---C
Confidence 356767765544 1 1 2348899996521 1122 23455778899999996654 5
Q ss_pred CCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC-ceeEEEeCCCCCCCCCC---
Q 011049 311 EGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-LFCCGIARSGSYNKTLT--- 384 (494)
Q Consensus 311 ~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~-~~~a~v~~~~~~~~~~~--- 384 (494)
+|.+... ....+..++|+.+.++.+ + .+++.++|||+||.+++.++.++|+ +++++|+.++.......
T Consensus 61 ~G~S~~~~~~~~~~~~a~dl~~~l~~l---~---~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~ 134 (277)
T 1brt_A 61 FGQSSQPTTGYDYDTFAADLNTVLETL---D---LQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDD 134 (277)
T ss_dssp STTSCCCSSCCSHHHHHHHHHHHHHHH---T---CCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTT
T ss_pred CCCCCCCCCCccHHHHHHHHHHHHHHh---C---CCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCcccccccc
Confidence 6655432 223466778888887776 2 3689999999999999999999998 99999998874321110
Q ss_pred -CCC-cccc------------------------ccc-----ccccHH---HHH------------------hcCcccccc
Q 011049 385 -PFG-FQTE------------------------FRT-----LWEATN---VYI------------------EMSPITHAN 412 (494)
Q Consensus 385 -~~~-~~~~------------------------~~~-----~~~~~~---~~~------------------~~sp~~~~~ 412 (494)
+.. .... ... .....+ .+. ..+....+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 214 (277)
T 1brt_A 135 NPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIP 214 (277)
T ss_dssp BTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGG
T ss_pred CccccccHHHHHHHHHHHhcCchhhHHHHHHHHhhccccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhhcc
Confidence 000 0000 000 000000 000 112223466
Q ss_pred CCCCCEEEEecCCCCCCCCCHHHH-HHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 413 KIKKPILIIHGEVDDKVGLFPMQA-ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 413 ~~~~P~li~~G~~D~~v~~~~~~~-~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
++++|+|+++|++|..+| ...+ +.+.+.+. ..++++++++||... .+..+.+.+.+.+||.
T Consensus 215 ~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 276 (277)
T 1brt_A 215 RIDVPALILHGTGDRTLP--IENTARVFHKALP----SAEYVEVEGAPHGLL-WTHAEEVNTALLAFLA 276 (277)
T ss_dssp GCCSCEEEEEETTCSSSC--GGGTHHHHHHHCT----TSEEEEETTCCTTHH-HHTHHHHHHHHHHHHH
T ss_pred cCCCCeEEEecCCCccCC--hHHHHHHHHHHCC----CCcEEEeCCCCcchh-hhCHHHHHHHHHHHHh
Confidence 789999999999999987 7776 66666553 368999999999875 3567788888999985
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.72 E-value=8.9e-17 Score=140.12 Aligned_cols=187 Identities=10% Similarity=-0.073 Sum_probs=119.0
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhC-CeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVE 333 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~ 333 (494)
.|+||++||.+..... ...| .......|+++ ||.|+.++.++. +.. ....+ ++
T Consensus 4 ~p~vv~lHG~~~~~~~--------~~~~---~~~~~~~l~~~~g~~vi~~d~~g~---~~~--------~~~~~----~~ 57 (194)
T 2qs9_A 4 PSKAVIVPGNGGGDVT--------THGW---YGWVKKELEKIPGFQCLAKNMPDP---ITA--------RESIW----LP 57 (194)
T ss_dssp CCEEEEECCSSSSCTT--------TSTT---HHHHHHHHTTSTTCCEEECCCSST---TTC--------CHHHH----HH
T ss_pred CCEEEEECCCCCCCcc--------cchH---HHHHHHHHhhccCceEEEeeCCCC---Ccc--------cHHHH----HH
Confidence 6899999997521100 0111 11234466666 999999777642 111 11222 33
Q ss_pred HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccC
Q 011049 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANK 413 (494)
Q Consensus 334 ~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~ 413 (494)
.+.+.-.+ .+++.++|||+||.+++.++.++| ++++|+.+|........ ....... +........+.+
T Consensus 58 ~~~~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~---~~~~~~~------~~~~~~~~~~~~ 125 (194)
T 2qs9_A 58 FMETELHC-DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDE---NERASGY------FTRPWQWEKIKA 125 (194)
T ss_dssp HHHHTSCC-CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCH---HHHHTST------TSSCCCHHHHHH
T ss_pred HHHHHhCc-CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchh---hhHHHhh------hcccccHHHHHh
Confidence 34443222 378999999999999999999998 89999998865421100 0000000 000011122334
Q ss_pred CCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCCCCC
Q 011049 414 IKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNTS 488 (494)
Q Consensus 414 ~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 488 (494)
+.+|+|+++|++|..+| +..++++.+.+ . .++.++++++|.+.. +.. +.+.++++||++......+
T Consensus 126 ~~~p~lii~G~~D~~vp--~~~~~~~~~~~-~----~~~~~~~~~gH~~~~-~~p-~~~~~~~~fl~~~~~~~~~ 191 (194)
T 2qs9_A 126 NCPYIVQFGSTDDPFLP--WKEQQEVADRL-E----TKLHKFTDCGHFQNT-EFH-ELITVVKSLLKVPALEHHH 191 (194)
T ss_dssp HCSEEEEEEETTCSSSC--HHHHHHHHHHH-T----CEEEEESSCTTSCSS-CCH-HHHHHHHHHHTCCCCCCCC
T ss_pred hCCCEEEEEeCCCCcCC--HHHHHHHHHhc-C----CeEEEeCCCCCccch-hCH-HHHHHHHHHHHhhhhhhhc
Confidence 56799999999999998 99998888888 3 489999999998763 444 4566777999887765443
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.72 E-value=5.6e-17 Score=146.37 Aligned_cols=195 Identities=12% Similarity=0.064 Sum_probs=125.5
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND-RFVEQLVSSAEAAVE 333 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~-~~~~~~~~d~~~~v~ 333 (494)
.|+||++||.+.. ...|. ....| .+||.|++++.+ |+|.+.... ...++..+|+.++++
T Consensus 16 ~~~vv~~hG~~~~-----------~~~~~-----~~~~l-~~g~~v~~~d~~---g~g~s~~~~~~~~~~~~~~~~~~~~ 75 (245)
T 3e0x_A 16 PNTLLFVHGSGCN-----------LKIFG-----ELEKY-LEDYNCILLDLK---GHGESKGQCPSTVYGYIDNVANFIT 75 (245)
T ss_dssp SCEEEEECCTTCC-----------GGGGT-----TGGGG-CTTSEEEEECCT---TSTTCCSCCCSSHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCccc-----------HHHHH-----HHHHH-HhCCEEEEecCC---CCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 6899999997532 12232 11123 389999996665 445443222 234566777777663
Q ss_pred HHHHcCCCCCCcEEEEecChHHHHHHHHHHh-CCCceeEEEeCCCCCCCCCCCCCcc-------------cc----cccc
Q 011049 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAH-APHLFCCGIARSGSYNKTLTPFGFQ-------------TE----FRTL 395 (494)
Q Consensus 334 ~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~-~p~~~~a~v~~~~~~~~~~~~~~~~-------------~~----~~~~ 395 (494)
+...+...+ ++.++|||+||.+++.++.+ +|+ ++++|+++|............ .. ....
T Consensus 76 ~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (245)
T 3e0x_A 76 NSEVTKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNP 152 (245)
T ss_dssp HCTTTTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHHHTCSCSH
T ss_pred hhhhHhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhhcCcccccccchH
Confidence 333222233 89999999999999999999 999 999999998765311100000 00 0000
Q ss_pred ---------cccH-------HHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCC
Q 011049 396 ---------WEAT-------NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEH 459 (494)
Q Consensus 396 ---------~~~~-------~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 459 (494)
...+ ......+....+.++++|+|+++|++|..+| ...+..+.+.+. .++++++++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~g 226 (245)
T 3e0x_A 153 LSEKYFETLEKDPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTL--VEYSEIIKKEVE----NSELKIFETGK 226 (245)
T ss_dssp HHHHHHTTSCSSHHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSC--HHHHHHHHHHSS----SEEEEEESSCG
T ss_pred HHHHHHHHHhcCcHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCC--HHHHHHHHHHcC----CceEEEeCCCC
Confidence 0011 1122345556678889999999999999998 888877777663 47999999999
Q ss_pred CccCCcccHHHHHHHHHHHH
Q 011049 460 HVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 460 H~~~~~~~~~~~~~~~~~fl 479 (494)
|.+.. +....+.+.+.+||
T Consensus 227 H~~~~-~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 227 HFLLV-VNAKGVAEEIKNFI 245 (245)
T ss_dssp GGHHH-HTHHHHHHHHHTTC
T ss_pred cceEE-ecHHHHHHHHHhhC
Confidence 98653 45556666666653
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=99.72 E-value=6.5e-17 Score=148.17 Aligned_cols=196 Identities=18% Similarity=0.141 Sum_probs=128.2
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCC----C--chhHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP----N--DRFVEQLVSSA 328 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~----~--~~~~~~~~~d~ 328 (494)
.|+||++||.+.+ ...|.. ....|++ ||.|++++.+ |+|.+.. . ....++.++|+
T Consensus 20 ~p~vv~~HG~~~~-----------~~~~~~----~~~~l~~-g~~v~~~D~~---G~G~S~~~~~~~~~~~~~~~~~~~~ 80 (269)
T 4dnp_A 20 ERVLVLAHGFGTD-----------QSAWNR----ILPFFLR-DYRVVLYDLV---CAGSVNPDFFDFRRYTTLDPYVDDL 80 (269)
T ss_dssp SSEEEEECCTTCC-----------GGGGTT----TGGGGTT-TCEEEEECCT---TSTTSCGGGCCTTTCSSSHHHHHHH
T ss_pred CCEEEEEeCCCCc-----------HHHHHH----HHHHHhC-CcEEEEEcCC---CCCCCCCCCCCccccCcHHHHHHHH
Confidence 5899999997522 122332 2224455 9999996665 4555532 1 11235566666
Q ss_pred HHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC-C--Cccccc-----------cc
Q 011049 329 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-F--GFQTEF-----------RT 394 (494)
Q Consensus 329 ~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~-~--~~~~~~-----------~~ 394 (494)
.+.++.+ +.+++.++|||+||++++.++.++|++++++|++++........ + .+.... ..
T Consensus 81 ~~~~~~~------~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (269)
T 4dnp_A 81 LHILDAL------GIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYE 154 (269)
T ss_dssp HHHHHHT------TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHH
T ss_pred HHHHHhc------CCCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHH
Confidence 6666553 34689999999999999999999999999999998864321100 0 000000 00
Q ss_pred cc-----------cc----------------------HHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHH
Q 011049 395 LW-----------EA----------------------TNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFD 441 (494)
Q Consensus 395 ~~-----------~~----------------------~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~ 441 (494)
.| .. ...+...+....+.++++|+|+++|++|..+| ...+..+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~ 232 (269)
T 4dnp_A 155 AWVNGFAPLAVGADVPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVP--ASVATYLKN 232 (269)
T ss_dssp HHHHHHHHHHHCSSCHHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBC--HHHHHHHHH
T ss_pred HHHHHhhhhhccCCChhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccC--HHHHHHHHH
Confidence 00 00 00111224445677889999999999999998 888877777
Q ss_pred HHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 442 ALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 442 ~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
.+.. .++++++++++|.... +..+.+.+.+.+||++
T Consensus 233 ~~~~---~~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 233 HLGG---KNTVHWLNIEGHLPHL-SAPTLLAQELRRALSH 268 (269)
T ss_dssp HSSS---CEEEEEEEEESSCHHH-HCHHHHHHHHHHHHC-
T ss_pred hCCC---CceEEEeCCCCCCccc-cCHHHHHHHHHHHHhh
Confidence 6643 2799999999998763 5667788888888865
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=99.72 E-value=2.2e-16 Score=146.95 Aligned_cols=197 Identities=17% Similarity=0.164 Sum_probs=131.5
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND-RFVEQLVSSAEAAVE 333 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~-~~~~~~~~d~~~~v~ 333 (494)
.|+||++||.+.. ...|. ......|+++||.|++++.+| +|.+.... ...++.++|+.++++
T Consensus 43 ~~~vv~lHG~~~~-----------~~~~~---~~~~~~l~~~g~~vi~~D~~G---~G~s~~~~~~~~~~~~~~~~~~l~ 105 (293)
T 3hss_A 43 GDPVVFIAGRGGA-----------GRTWH---PHQVPAFLAAGYRCITFDNRG---IGATENAEGFTTQTMVADTAALIE 105 (293)
T ss_dssp SEEEEEECCTTCC-----------GGGGT---TTTHHHHHHTTEEEEEECCTT---SGGGTTCCSCCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCc-----------hhhcc---hhhhhhHhhcCCeEEEEccCC---CCCCCCcccCCHHHHHHHHHHHHH
Confidence 5789999997522 12232 123557789999999977654 44443322 234566777777777
Q ss_pred HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCC--------------Cccccc-------
Q 011049 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF--------------GFQTEF------- 392 (494)
Q Consensus 334 ~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~--------------~~~~~~------- 392 (494)
.+ +.+++.++|||+||.+++.++.++|++++++|+++|......... ......
T Consensus 106 ~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (293)
T 3hss_A 106 TL------DIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLL 179 (293)
T ss_dssp HH------TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred hc------CCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHHHh
Confidence 66 236899999999999999999999999999999998654211000 000000
Q ss_pred ----ccccccH---H---------------H-------HHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHH
Q 011049 393 ----RTLWEAT---N---------------V-------YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDAL 443 (494)
Q Consensus 393 ----~~~~~~~---~---------------~-------~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l 443 (494)
....... . . ....+....+.++++|+|+++|++|..+| ...+.++.+.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~--~~~~~~~~~~~ 257 (293)
T 3hss_A 180 ENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTP--PYLGREVADAL 257 (293)
T ss_dssp HHSCHHHHTCHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSC--HHHHHHHHHHS
T ss_pred hhcccccccccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCC--HHHHHHHHHHC
Confidence 0000000 0 0 00112233457789999999999999998 88877777766
Q ss_pred HhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 444 KGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 444 ~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
. .+++.++++++|... .+....+.+.+.+||++
T Consensus 258 ~----~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~ 290 (293)
T 3hss_A 258 P----NGRYLQIPDAGHLGF-FERPEAVNTAMLKFFAS 290 (293)
T ss_dssp T----TEEEEEETTCCTTHH-HHSHHHHHHHHHHHHHT
T ss_pred C----CceEEEeCCCcchHh-hhCHHHHHHHHHHHHHh
Confidence 3 379999999999865 35667788888899875
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=9.6e-17 Score=147.09 Aligned_cols=198 Identities=10% Similarity=-0.014 Sum_probs=128.2
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCc---hhHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~ 331 (494)
.|+||++||.+. +...|. .....|+++||.|+++|.+ |+|.+.... ....+.++|+.+.
T Consensus 12 ~~~vvllHG~~~-----------~~~~~~----~~~~~l~~~g~~v~~~D~~---G~G~S~~~~~~~~~~~~~~~~~~~~ 73 (267)
T 3sty_A 12 KKHFVLVHAAFH-----------GAWCWY----KIVALMRSSGHNVTALDLG---ASGINPKQALQIPNFSDYLSPLMEF 73 (267)
T ss_dssp CCEEEEECCTTC-----------CGGGGH----HHHHHHHHTTCEEEEECCT---TSTTCSCCGGGCCSHHHHHHHHHHH
T ss_pred CCeEEEECCCCC-----------CcchHH----HHHHHHHhcCCeEEEeccc---cCCCCCCcCCccCCHHHHHHHHHHH
Confidence 689999999752 112232 3455778899999996654 566554332 2345556666665
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC--------------CCC---cc--cc-
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT--------------PFG---FQ--TE- 391 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~--------------~~~---~~--~~- 391 (494)
++.+ + +.+++.++|||+||.+++.++.++|++++++|.+++....... .+. +. ..
T Consensus 74 l~~l---~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (267)
T 3sty_A 74 MASL---P--ANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGP 148 (267)
T ss_dssp HHTS---C--TTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCT
T ss_pred HHhc---C--CCCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhh
Confidence 5544 2 3578999999999999999999999999999988875431110 000 00 00
Q ss_pred ---cccccccH-------------H------------------HHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHH
Q 011049 392 ---FRTLWEAT-------------N------------------VYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAE 437 (494)
Q Consensus 392 ---~~~~~~~~-------------~------------------~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~ 437 (494)
....+... + .+............++|+|+++|++|..+| +...+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~ 226 (267)
T 3sty_A 149 TNPPTTLIAGPKFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALK--KEFLK 226 (267)
T ss_dssp TSCCCEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTGGGSCEEEEECCCSCHHH--HHHHH
T ss_pred hcccchhhhhHHHHHHhhcccCCHHHHHHHHHhhccchhHHHHHhhcchhcccccccCCCEEEEEeCCCCccC--HHHHH
Confidence 00000000 0 011112222222235899999999999987 77777
Q ss_pred HHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 438 RFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 438 ~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
++.+.+. .+++++++++||... .++.+.+.+.+.+|++++
T Consensus 227 ~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 227 LMIEKNP----PDEVKEIEGSDHVTM-MSKPQQLFTTLLSIANKY 266 (267)
T ss_dssp HHHHHSC----CSEEEECTTCCSCHH-HHSHHHHHHHHHHHHHHC
T ss_pred HHHHhCC----CceEEEeCCCCcccc-ccChHHHHHHHHHHHHhc
Confidence 7766653 368999999999876 366778888999999875
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.71 E-value=2.3e-16 Score=153.70 Aligned_cols=152 Identities=14% Similarity=0.200 Sum_probs=91.6
Q ss_pred ccccEEEEEEcCC--C--ceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCcc--CCCCchhHHHHH
Q 011049 221 SLQKEMIKYQRKD--G--VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEF--SGMTPTSSLIFL 294 (494)
Q Consensus 221 ~~~~~~~~~~~~d--g--~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~ 294 (494)
.....++.|.+.+ | ..+.++++.|.+..+ .+++|+|+++||++....... +..+ ..........|+
T Consensus 43 ~v~~~~i~y~t~~~~g~~~~~~g~l~~P~~~~~--~~~~P~vv~~HG~~~~~~~~~------~~~~~~~~~~~~~~~~l~ 114 (397)
T 3h2g_A 43 NVRVAEFTYATIGVEGEPATASGVLLIPGGERC--SGPYPLLGWGHPTEALRAQEQ------AKEIRDAKGDDPLVTRLA 114 (397)
T ss_dssp EEEEEEEEEEEECTTSCEEEEEEEEEEEECTTC--CSCEEEEEEECCCCCBTTCCH------HHHHHHTTTCSHHHHTTG
T ss_pred CeEEEEEEEEecCCCCCeEEEEEEEEeCCCCCC--CCCCcEEEEeCCCcCCCCccc------ccccccccchHHHHHHHH
Confidence 3456677787665 4 368999999987533 345899999999764321100 0000 011223456778
Q ss_pred hCCeEEEeCCCCCCCCCCCCCCCc-h--hHHHHHHHHHHHHHHHHHc-CCCCCCcEEEEecChHHHHHHHHHH-hCC---
Q 011049 295 ARRFAVLAGPSIPIIGEGDKLPND-R--FVEQLVSSAEAAVEEVVRR-GVADPSRIAVGGHSYGAFMTAHLLA-HAP--- 366 (494)
Q Consensus 295 ~~G~~v~~~~~~~~~g~g~~~~~~-~--~~~~~~~d~~~~v~~l~~~-~~~d~~ri~i~G~S~GG~~a~~~~~-~~p--- 366 (494)
++||.|+++|++|..+.+...... . .....+.|...++..+.++ +..|+++|+++|||+||++++.++. ..+
T Consensus 115 ~~G~~V~~~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~ 194 (397)
T 3h2g_A 115 SQGYVVVGSDYLGLGKSNYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLS 194 (397)
T ss_dssp GGTCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCT
T ss_pred HCCCEEEEecCCCCCCCCCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcC
Confidence 999999998876543221111111 1 1112344455555555443 5556789999999999999988863 222
Q ss_pred --CceeEEEeCCCCCC
Q 011049 367 --HLFCCGIARSGSYN 380 (494)
Q Consensus 367 --~~~~a~v~~~~~~~ 380 (494)
-.+.++++.++..+
T Consensus 195 ~~~~~~~~~~~~~~~~ 210 (397)
T 3h2g_A 195 KEFHLVASAPISGPYA 210 (397)
T ss_dssp TTSEEEEEEEESCCSS
T ss_pred cCcceEEEeccccccc
Confidence 15778888777655
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=99.71 E-value=4.1e-17 Score=149.83 Aligned_cols=213 Identities=13% Similarity=0.115 Sum_probs=136.0
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEEeCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIG 310 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g 310 (494)
.+|.++.+...- +.|.||++||.+... ..|. .....|+. +||.|++++.+ |
T Consensus 8 ~~g~~l~y~~~g----------~~~~vv~lhG~~~~~-----------~~~~----~~~~~l~~~~g~~v~~~d~~---G 59 (272)
T 3fsg_A 8 LTRSNISYFSIG----------SGTPIIFLHGLSLDK-----------QSTC----LFFEPLSNVGQYQRIYLDLP---G 59 (272)
T ss_dssp ECTTCCEEEEEC----------CSSEEEEECCTTCCH-----------HHHH----HHHTTSTTSTTSEEEEECCT---T
T ss_pred ecCCeEEEEEcC----------CCCeEEEEeCCCCcH-----------HHHH----HHHHHHhccCceEEEEecCC---C
Confidence 467777765431 147899999965211 1121 11223444 69999996665 4
Q ss_pred CCCCCCCc-hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCC---
Q 011049 311 EGDKLPND-RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF--- 386 (494)
Q Consensus 311 ~g~~~~~~-~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~--- 386 (494)
+|.+.... ...+..++|+.+.++.+. +.+++.++|||+||.+++.++.++|++++++|+++|.........
T Consensus 60 ~G~s~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 134 (272)
T 3fsg_A 60 MGNSDPISPSTSDNVLETLIEAIEEII-----GARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTG 134 (272)
T ss_dssp STTCCCCSSCSHHHHHHHHHHHHHHHH-----TTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHh-----CCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccc
Confidence 55553322 335666777777777642 337899999999999999999999999999999988753211000
Q ss_pred --------Cccc----cc------ccccccHH---HH-------------------Hh-----cCccccccCCCCCEEEE
Q 011049 387 --------GFQT----EF------RTLWEATN---VY-------------------IE-----MSPITHANKIKKPILII 421 (494)
Q Consensus 387 --------~~~~----~~------~~~~~~~~---~~-------------------~~-----~sp~~~~~~~~~P~li~ 421 (494)
.+.. .. ........ .+ .. .++...+.++++|+|++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 214 (272)
T 3fsg_A 135 KHINILEEDINPVENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIM 214 (272)
T ss_dssp CCCCEECSCCCCCTTGGGHHHHHHHCSEESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEE
T ss_pred cchhhhhhhhhcccCHHHHHHHHHHhccCCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEE
Confidence 0000 00 00000000 00 00 01111346789999999
Q ss_pred ecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 422 HGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 422 ~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
+|++|..+| +..+.++.+.+ ..+++.++++++|.+.. +....+.+.+.+||++...
T Consensus 215 ~g~~D~~~~--~~~~~~~~~~~----~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~~ 270 (272)
T 3fsg_A 215 VGRNDQVVG--YQEQLKLINHN----ENGEIVLLNRTGHNLMI-DQREAVGFHFDLFLDELNS 270 (272)
T ss_dssp EETTCTTTC--SHHHHHHHTTC----TTEEEEEESSCCSSHHH-HTHHHHHHHHHHHHHHHHC
T ss_pred EeCCCCcCC--HHHHHHHHHhc----CCCeEEEecCCCCCchh-cCHHHHHHHHHHHHHHhhc
Confidence 999999987 77776665544 35899999999998763 5677888899999988654
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.71 E-value=4.8e-17 Score=141.52 Aligned_cols=182 Identities=13% Similarity=-0.007 Sum_probs=115.7
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCC-ccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPN-EFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVE 333 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~ 333 (494)
.|+||++||.+.+. . .|. ......|+++||.|+.++.+.+ +. . .....++|+.+.++
T Consensus 4 ~p~vv~~HG~~~~~-----------~~~~~---~~~~~~l~~~g~~v~~~d~~~~---~~---~--~~~~~~~~~~~~~~ 61 (192)
T 1uxo_A 4 TKQVYIIHGYRASS-----------TNHWF---PWLKKRLLADGVQADILNMPNP---LQ---P--RLEDWLDTLSLYQH 61 (192)
T ss_dssp CCEEEEECCTTCCT-----------TSTTH---HHHHHHHHHTTCEEEEECCSCT---TS---C--CHHHHHHHHHTTGG
T ss_pred CCEEEEEcCCCCCc-----------chhHH---HHHHHHHHhCCcEEEEecCCCC---CC---C--CHHHHHHHHHHHHH
Confidence 58899999975221 1 121 1122357789999999877611 11 1 12344444444433
Q ss_pred HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC--ceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHh-cCcccc
Q 011049 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH--LFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIE-MSPITH 410 (494)
Q Consensus 334 ~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~--~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~sp~~~ 410 (494)
.+ .+++.++|||+||.+++.++.++|+ +++++|+.+|....... +.. ...+.. ......
T Consensus 62 ~~-------~~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~---~~~--------~~~~~~~~~~~~~ 123 (192)
T 1uxo_A 62 TL-------HENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPT---LQM--------LDEFTQGSFDHQK 123 (192)
T ss_dssp GC-------CTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTT---CGG--------GGGGTCSCCCHHH
T ss_pred hc-------cCCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCcccc---chh--------hhhhhhcCCCHHH
Confidence 22 4789999999999999999999999 99999999986542110 000 000000 001123
Q ss_pred ccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 411 ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 411 ~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
+.++++|+|+++|++|..+| ...++++.+.+ +.+++++++++|.+... .. ..+.++.+||.+++..
T Consensus 124 ~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~-~~-~~~~~~~~~l~~~l~~ 189 (192)
T 1uxo_A 124 IIESAKHRAVIASKDDQIVP--FSFSKDLAQQI-----DAALYEVQHGGHFLEDE-GF-TSLPIVYDVLTSYFSK 189 (192)
T ss_dssp HHHHEEEEEEEEETTCSSSC--HHHHHHHHHHT-----TCEEEEETTCTTSCGGG-TC-SCCHHHHHHHHHHHHC
T ss_pred HHhhcCCEEEEecCCCCcCC--HHHHHHHHHhc-----CceEEEeCCCcCccccc-cc-ccHHHHHHHHHHHHHH
Confidence 34566899999999999998 88888888777 35899999999987532 21 1123356666666543
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=99.71 E-value=5.2e-17 Score=149.70 Aligned_cols=224 Identities=11% Similarity=0.032 Sum_probs=134.3
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeC
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 303 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 303 (494)
.+...+++.+| ++.+....+ +.|+||++||.+.+ ...| ......|+++||.|+++
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~---------~~~~vv~lHG~~~~-----------~~~~----~~~~~~l~~~g~~v~~~ 57 (279)
T 4g9e_A 3 INYHELETSHG-RIAVRESEG---------EGAPLLMIHGNSSS-----------GAIF----APQLEGEIGKKWRVIAP 57 (279)
T ss_dssp CEEEEEEETTE-EEEEEECCC---------CEEEEEEECCTTCC-----------GGGG----HHHHHSHHHHHEEEEEE
T ss_pred eEEEEEEcCCc-eEEEEecCC---------CCCeEEEECCCCCc-----------hhHH----HHHHhHHHhcCCeEEee
Confidence 34556666665 555443321 25889999997521 1112 12344557789999996
Q ss_pred CCCCCCCCCCCCCCc-----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC
Q 011049 304 PSIPIIGEGDKLPND-----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 304 ~~~~~~g~g~~~~~~-----~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 378 (494)
+.+ |+|.+.... ....+.++|+.+.++.+ +.+++.++|||+||.+++.++.++|+ +.++|..++.
T Consensus 58 d~~---G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~ 127 (279)
T 4g9e_A 58 DLP---GHGKSTDAIDPDRSYSMEGYADAMTEVMQQL------GIADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTP 127 (279)
T ss_dssp CCT---TSTTSCCCSCHHHHSSHHHHHHHHHHHHHHH------TCCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCC
T ss_pred cCC---CCCCCCCCCCcccCCCHHHHHHHHHHHHHHh------CCCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCC
Confidence 654 556554321 12344556666655544 23689999999999999999999999 5555555443
Q ss_pred CCCCC-------CCCCccccc-----------------ccccc--cHHHHH------------------hcCccccccCC
Q 011049 379 YNKTL-------TPFGFQTEF-----------------RTLWE--ATNVYI------------------EMSPITHANKI 414 (494)
Q Consensus 379 ~~~~~-------~~~~~~~~~-----------------~~~~~--~~~~~~------------------~~sp~~~~~~~ 414 (494)
..... ......... ..... ..+.+. ..+....+.++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 207 (279)
T 4g9e_A 128 PVAREEVGQGFKSGPDMALAGQEIFSERDVESYARSTCGEPFEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEA 207 (279)
T ss_dssp CCCGGGHHHHBCCSTTGGGGGCSCCCHHHHHHHHHHHHCSSCCHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHHC
T ss_pred CCCCCccchhhccchhhhhcCcccccHHHHHHHHHhhccCcccHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHHhc
Confidence 22100 000000000 00000 000000 11222335678
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCCCCC
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNTS 488 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 488 (494)
++|+|+++|++|..+| ...+..+.. +.-.+++++++++++|... .+....+.+.+.+||.+.....+.
T Consensus 208 ~~P~l~i~g~~D~~~~--~~~~~~~~~---~~~~~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~~~~~~~~ 275 (279)
T 4g9e_A 208 QLPIAVVNGRDEPFVE--LDFVSKVKF---GNLWEGKTHVIDNAGHAPF-REAPAEFDAYLARFIRDCTQLEHH 275 (279)
T ss_dssp CSCEEEEEETTCSSBC--HHHHTTCCC---SSBGGGSCEEETTCCSCHH-HHSHHHHHHHHHHHHHHHHSSCCC
T ss_pred CCCEEEEEcCCCcccc--hHHHHHHhh---ccCCCCeEEEECCCCcchH-HhCHHHHHHHHHHHHHHhhhhhhh
Confidence 9999999999999998 776655441 1223468899999999865 366778889999999998776544
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.70 E-value=5.1e-16 Score=147.38 Aligned_cols=216 Identities=16% Similarity=0.146 Sum_probs=135.4
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEEeCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIG 310 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g 310 (494)
.+|.++.+...-|++. ..+.+.||++||++.+ ...|. .....|+. .||.|+++|.+ |
T Consensus 35 ~~g~~l~y~~~G~~~~----~~~g~plvllHG~~~~-----------~~~w~----~~~~~l~~~~~~~Via~D~r---G 92 (330)
T 3nwo_A 35 FGDHETWVQVTTPENA----QPHALPLIVLHGGPGM-----------AHNYV----ANIAALADETGRTVIHYDQV---G 92 (330)
T ss_dssp ETTEEEEEEEECCSSC----CTTCCCEEEECCTTTC-----------CSGGG----GGGGGHHHHHTCCEEEECCT---T
T ss_pred ecCcEEEEEEecCccC----CCCCCcEEEECCCCCC-----------chhHH----HHHHHhccccCcEEEEECCC---C
Confidence 4788998888876421 1011257789996521 12232 12234554 69999995554 5
Q ss_pred CCCCCC--C--c--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC-
Q 011049 311 EGDKLP--N--D--RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL- 383 (494)
Q Consensus 311 ~g~~~~--~--~--~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~- 383 (494)
+|.+.. . . ...+..++|+.+.++.+ + .+++.|+||||||.+++.+|.++|++++++|+.++......
T Consensus 93 ~G~S~~~~~~~~~~~~~~~~a~dl~~ll~~l---g---~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~ 166 (330)
T 3nwo_A 93 CGNSTHLPDAPADFWTPQLFVDEFHAVCTAL---G---IERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLW 166 (330)
T ss_dssp STTSCCCTTSCGGGCCHHHHHHHHHHHHHHH---T---CCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHH
T ss_pred CCCCCCCCCCccccccHHHHHHHHHHHHHHc---C---CCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHH
Confidence 665532 1 1 12456677877777765 3 26899999999999999999999999999998766432000
Q ss_pred ----------CC---------------CC---cccc----------cccccc------------cHHHHH----------
Q 011049 384 ----------TP---------------FG---FQTE----------FRTLWE------------ATNVYI---------- 403 (494)
Q Consensus 384 ----------~~---------------~~---~~~~----------~~~~~~------------~~~~~~---------- 403 (494)
.. .. +... ....+. .+..+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (330)
T 3nwo_A 167 SEAAGDLRAQLPAETRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHV 246 (330)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHSCHHHHHHTCSCSSSC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhccchhhhhcccCchhhhh
Confidence 00 00 0000 000000 000011
Q ss_pred -----hcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHH
Q 011049 404 -----EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRW 478 (494)
Q Consensus 404 -----~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f 478 (494)
..+....+.++++|+|+++|++|..+| ....++.+.+ ...+++++|++||... .+..+.+.+.+.+|
T Consensus 247 ~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p---~~~~~~~~~i----p~~~~~~i~~~gH~~~-~e~p~~~~~~i~~F 318 (330)
T 3nwo_A 247 VGTLGDWSVIDRLPDVTAPVLVIAGEHDEATP---KTWQPFVDHI----PDVRSHVFPGTSHCTH-LEKPEEFRAVVAQF 318 (330)
T ss_dssp CSGGGGCBCGGGGGGCCSCEEEEEETTCSSCH---HHHHHHHHHC----SSEEEEEETTCCTTHH-HHSHHHHHHHHHHH
T ss_pred hccccCCchhhhcccCCCCeEEEeeCCCccCh---HHHHHHHHhC----CCCcEEEeCCCCCchh-hcCHHHHHHHHHHH
Confidence 012233466789999999999999764 4555555443 3579999999999876 36777889999999
Q ss_pred HHHhc
Q 011049 479 LQKYC 483 (494)
Q Consensus 479 l~~~l 483 (494)
|.++-
T Consensus 319 L~~~~ 323 (330)
T 3nwo_A 319 LHQHD 323 (330)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 98864
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.70 E-value=8.6e-16 Score=141.06 Aligned_cols=210 Identities=18% Similarity=0.173 Sum_probs=136.5
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
.+|.++.+..+-|.+ .+.|.||++||.+.+ ...|. .....|+ .+|.|+++|.+ |+
T Consensus 9 ~~g~~l~y~~~g~~~------~~~~~vvllHG~~~~-----------~~~~~----~~~~~L~-~~~~vi~~D~~---G~ 63 (266)
T 2xua_A 9 VNGTELHYRIDGERH------GNAPWIVLSNSLGTD-----------LSMWA----PQVAALS-KHFRVLRYDTR---GH 63 (266)
T ss_dssp CSSSEEEEEEESCSS------SCCCEEEEECCTTCC-----------GGGGG----GGHHHHH-TTSEEEEECCT---TS
T ss_pred ECCEEEEEEEcCCcc------CCCCeEEEecCccCC-----------HHHHH----HHHHHHh-cCeEEEEecCC---CC
Confidence 588889888775421 114789999996421 12232 2344554 56999996554 56
Q ss_pred CCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC-CC-
Q 011049 312 GDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-FG- 387 (494)
Q Consensus 312 g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~-~~- 387 (494)
|.+... ....+..++|+.+.++.+ + .+++.++|||+||.+++.+|.++|++++++|+.++........ +.
T Consensus 64 G~S~~~~~~~~~~~~~~dl~~~l~~l---~---~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~ 137 (266)
T 2xua_A 64 GHSEAPKGPYTIEQLTGDVLGLMDTL---K---IARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVP 137 (266)
T ss_dssp TTSCCCSSCCCHHHHHHHHHHHHHHT---T---CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhc---C---CCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHH
Confidence 655432 223566677877777765 2 3589999999999999999999999999999987754321000 00
Q ss_pred ---------ccc---cccccc-------cc---------------HHH-------HHhcCccccccCCCCCEEEEecCCC
Q 011049 388 ---------FQT---EFRTLW-------EA---------------TNV-------YIEMSPITHANKIKKPILIIHGEVD 426 (494)
Q Consensus 388 ---------~~~---~~~~~~-------~~---------------~~~-------~~~~sp~~~~~~~~~P~li~~G~~D 426 (494)
... .....| .. ... +...+....+.++++|+|+++|++|
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D 217 (266)
T 2xua_A 138 RAVKARTEGMHALADAVLPRWFTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHD 217 (266)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHSCHHHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTC
T ss_pred HHHHHHhcChHHHHHHHHHHHcCcccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCC
Confidence 000 000000 00 000 1122333456778999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 427 DKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 427 ~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
..+| +..++++.+.+.. .++++++ +||... .+..+.+.+.+.+||.
T Consensus 218 ~~~~--~~~~~~~~~~~~~----~~~~~~~-~gH~~~-~e~p~~~~~~i~~fl~ 263 (266)
T 2xua_A 218 LAAT--PAQGRELAQAIAG----ARYVELD-ASHISN-IERADAFTKTVVDFLT 263 (266)
T ss_dssp SSSC--HHHHHHHHHHSTT----CEEEEES-CCSSHH-HHTHHHHHHHHHHHHT
T ss_pred CcCC--HHHHHHHHHhCCC----CEEEEec-CCCCch-hcCHHHHHHHHHHHHH
Confidence 9988 8877777766643 5899999 999876 3556778888889885
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.70 E-value=1.6e-16 Score=153.71 Aligned_cols=180 Identities=13% Similarity=0.120 Sum_probs=116.7
Q ss_pred HHhCCeEEEeCCCCC-CCCCCCCCC-----C--------chhHHHHHHHHHHHHHHHHHcCCCCCCcEE-EEecChHHHH
Q 011049 293 FLARRFAVLAGPSIP-IIGEGDKLP-----N--------DRFVEQLVSSAEAAVEEVVRRGVADPSRIA-VGGHSYGAFM 357 (494)
Q Consensus 293 l~~~G~~v~~~~~~~-~~g~g~~~~-----~--------~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~-i~G~S~GG~~ 357 (494)
|+++||.|+++|.+| ..+...... + .....+.++|+.++++.+ +.+++. ++|||+||.+
T Consensus 94 L~~~g~~vi~~D~~G~~g~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~~lvGhS~Gg~i 167 (377)
T 2b61_A 94 LDTDRYFFISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHL------GISHLKAIIGGSFGGMQ 167 (377)
T ss_dssp EETTTCEEEEECCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHT------TCCCEEEEEEETHHHHH
T ss_pred cccCCceEEEecCCCCCCCCCCCcccCccccccccccCCcccHHHHHHHHHHHHHHc------CCcceeEEEEEChhHHH
Confidence 457999999988776 222111100 0 112345566655555433 346787 9999999999
Q ss_pred HHHHHHhCCCceeEEEeCCCCCCCCC--------------C--CCC---cc---------------------c-c-----
Q 011049 358 TAHLLAHAPHLFCCGIARSGSYNKTL--------------T--PFG---FQ---------------------T-E----- 391 (494)
Q Consensus 358 a~~~~~~~p~~~~a~v~~~~~~~~~~--------------~--~~~---~~---------------------~-~----- 391 (494)
++.+|.++|++++++|++++...... . .+. +. . .
T Consensus 168 a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (377)
T 2b61_A 168 ANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKA 247 (377)
T ss_dssp HHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHHCchhhheeEEeccCccccccchhHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHH
Confidence 99999999999999999988643210 0 000 00 0 0
Q ss_pred c----cc--cc----ccHHH------------------------HHhcC-------ccccccCCCCCEEEEecCCCCCCC
Q 011049 392 F----RT--LW----EATNV------------------------YIEMS-------PITHANKIKKPILIIHGEVDDKVG 430 (494)
Q Consensus 392 ~----~~--~~----~~~~~------------------------~~~~s-------p~~~~~~~~~P~li~~G~~D~~v~ 430 (494)
. .. ++ ...+. +...+ ....+.++++|+|+++|++|..+|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~ 327 (377)
T 2b61_A 248 FGRATKSDGSFWGDYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFK 327 (377)
T ss_dssp TTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSC
T ss_pred hccccccccccccchHHHHHHHHhhhhhhccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCC
Confidence 0 00 00 00000 00111 134567789999999999999998
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEEcC-CCCCccCCcccHHHHHHHHHHHHHH
Q 011049 431 LFPMQAERFFDALKGHGALSRLVLLP-FEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 431 ~~~~~~~~~~~~l~~~g~~~~~~~~~-~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
+.++.+..+.+.+....+++++++ ++||.... +....+.+.+.+||.+
T Consensus 328 --~~~~~~~~~~l~~~~~~~~~~~i~~~~gH~~~~-e~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 328 --PIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAFL-VDYDQFEKRIRDGLAG 376 (377)
T ss_dssp --HHHHHHHHHHHHHTTCEEEEEEECCTTGGGHHH-HCHHHHHHHHHHHHHT
T ss_pred --ccchHHHHHHHHhcCCCceEEEeCCCCCchhhh-cCHHHHHHHHHHHHhc
Confidence 866667777777776778999999 99998763 5566888889999875
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.70 E-value=6.5e-16 Score=143.39 Aligned_cols=216 Identities=16% Similarity=0.081 Sum_probs=133.1
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 308 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 308 (494)
+...+|.++.+...-++ . .|+||++||.+.+. .+...|. .....|++ +|.|+++|.+
T Consensus 11 ~~~~~g~~l~y~~~g~~------g--~p~vvllHG~~~~~--------~~~~~~~----~~~~~L~~-~~~vi~~D~~-- 67 (285)
T 1c4x_A 11 RFPSGTLASHALVAGDP------Q--SPAVVLLHGAGPGA--------HAASNWR----PIIPDLAE-NFFVVAPDLI-- 67 (285)
T ss_dssp EECCTTSCEEEEEESCT------T--SCEEEEECCCSTTC--------CHHHHHG----GGHHHHHT-TSEEEEECCT--
T ss_pred EEEECCEEEEEEecCCC------C--CCEEEEEeCCCCCC--------cchhhHH----HHHHHHhh-CcEEEEecCC--
Confidence 44467888876654221 1 47799999963110 0001121 22334544 5999996655
Q ss_pred CCCCCCCCC---chhHHHH----HHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCC
Q 011049 309 IGEGDKLPN---DRFVEQL----VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 381 (494)
Q Consensus 309 ~g~g~~~~~---~~~~~~~----~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~ 381 (494)
|+|.+... ....+.. ++|+.+.++.+ + .+++.++|||+||.+++.++.++|++++++|+.++....
T Consensus 68 -G~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~l---~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 140 (285)
T 1c4x_A 68 -GFGQSEYPETYPGHIMSWVGMRVEQILGLMNHF---G---IEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAP 140 (285)
T ss_dssp -TSTTSCCCSSCCSSHHHHHHHHHHHHHHHHHHH---T---CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSC
T ss_pred -CCCCCCCCCCcccchhhhhhhHHHHHHHHHHHh---C---CCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCC
Confidence 55555322 1223455 66666665554 3 368999999999999999999999999999998875421
Q ss_pred CCCCC-------Cc---cc------------cccccc--------------ccHHHHH---h------------cCcccc
Q 011049 382 TLTPF-------GF---QT------------EFRTLW--------------EATNVYI---E------------MSPITH 410 (494)
Q Consensus 382 ~~~~~-------~~---~~------------~~~~~~--------------~~~~~~~---~------------~sp~~~ 410 (494)
..... .+ .. ...... ..+..+. . ......
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (285)
T 1c4x_A 141 MNARPPELARLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPAT 220 (285)
T ss_dssp CSSCCHHHHHHHTGGGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHH
T ss_pred CCccchhHHHHHHHhccccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhh
Confidence 10000 00 00 000000 0000000 0 001234
Q ss_pred ccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 411 ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 411 ~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
+.++++|+|+++|++|..+| +..++.+.+.+. +.++++++++||.... +....+.+.+.+||.+
T Consensus 221 l~~i~~P~lii~G~~D~~~p--~~~~~~~~~~~~----~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 221 LGRLPHDVLVFHGRQDRIVP--LDTSLYLTKHLK----HAELVVLDRCGHWAQL-ERWDAMGPMLMEHFRA 284 (285)
T ss_dssp HTTCCSCEEEEEETTCSSSC--THHHHHHHHHCS----SEEEEEESSCCSCHHH-HSHHHHHHHHHHHHHC
T ss_pred hccCCCCEEEEEeCCCeeeC--HHHHHHHHHhCC----CceEEEeCCCCcchhh-cCHHHHHHHHHHHHhc
Confidence 56789999999999999988 787777766553 4799999999998653 5667788889999863
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=4.3e-16 Score=149.57 Aligned_cols=119 Identities=15% Similarity=0.123 Sum_probs=84.5
Q ss_pred cCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCC
Q 011049 231 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 310 (494)
Q Consensus 231 ~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g 310 (494)
..+|.++++...-|++ + ..|+||++||.+.+ ...|. .....|+++||.|++++.+ |
T Consensus 9 ~~~g~~l~y~~~G~~~----~--~~~~vv~~hG~~~~-----------~~~~~----~~~~~l~~~g~~vi~~d~~---g 64 (356)
T 2e3j_A 9 NCRGTRIHAVADSPPD----Q--QGPLVVLLHGFPES-----------WYSWR----HQIPALAGAGYRVVAIDQR---G 64 (356)
T ss_dssp EETTEEEEEEEECCTT----C--CSCEEEEECCTTCC-----------GGGGT----TTHHHHHHTTCEEEEECCT---T
T ss_pred ccCCeEEEEEEecCCC----C--CCCEEEEECCCCCc-----------HHHHH----HHHHHHHHcCCEEEEEcCC---C
Confidence 3578899888876642 1 15889999997521 12232 2455778899999996665 4
Q ss_pred CCCCCCC----chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC
Q 011049 311 EGDKLPN----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 379 (494)
Q Consensus 311 ~g~~~~~----~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 379 (494)
+|.+... .......++|+.+.++.+ +.+++.++|||+||.+++.++.++|++++++|++++..
T Consensus 65 ~g~s~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 65 YGRSSKYRVQKAYRIKELVGDVVGVLDSY------GAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp STTSCCCCSGGGGSHHHHHHHHHHHHHHT------TCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHc------CCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 5544322 123455667776666654 34789999999999999999999999999999987654
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.2e-16 Score=147.09 Aligned_cols=211 Identities=15% Similarity=0.086 Sum_probs=132.6
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
.+|.++.+..+-+++ .|+||++||.+.. ...|. .....| ++||.|++++.+ |+
T Consensus 17 ~~g~~l~~~~~g~~~--------~~~vl~lHG~~~~-----------~~~~~----~~~~~l-~~~~~v~~~d~~---G~ 69 (299)
T 3g9x_A 17 VLGERMHYVDVGPRD--------GTPVLFLHGNPTS-----------SYLWR----NIIPHV-APSHRCIAPDLI---GM 69 (299)
T ss_dssp ETTEEEEEEEESCSS--------SCCEEEECCTTCC-----------GGGGT----TTHHHH-TTTSCEEEECCT---TS
T ss_pred eCCeEEEEEecCCCC--------CCEEEEECCCCcc-----------HHHHH----HHHHHH-ccCCEEEeeCCC---CC
Confidence 478888877764432 4679999997522 12232 223344 579999996665 45
Q ss_pred CCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC-CC--
Q 011049 312 GDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT-PF-- 386 (494)
Q Consensus 312 g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~-~~-- 386 (494)
|.+... ....++.++|+.++++.+ +.+++.++|||+||.+++.++.++|++++++|++++....... .+
T Consensus 70 G~s~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 143 (299)
T 3g9x_A 70 GKSDKPDLDYFFDDHVRYLDAFIEAL------GLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPE 143 (299)
T ss_dssp TTSCCCCCCCCHHHHHHHHHHHHHHT------TCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCG
T ss_pred CCCCCCCCcccHHHHHHHHHHHHHHh------CCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcch
Confidence 554322 233456667766666654 3468999999999999999999999999999998854332100 00
Q ss_pred Ccc-------cc---------------------ccccc--ccH-----------------HHHHhc--------------
Q 011049 387 GFQ-------TE---------------------FRTLW--EAT-----------------NVYIEM-------------- 405 (494)
Q Consensus 387 ~~~-------~~---------------------~~~~~--~~~-----------------~~~~~~-------------- 405 (494)
... .. ..... ... ..+...
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (299)
T 3g9x_A 144 FARETFQAFRTADVGRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVE 223 (299)
T ss_dssp GGHHHHHHHTSSSHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHH
T ss_pred HHHHHHHHHcCCCcchhhhccchhhHHHhhhhhhccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhh
Confidence 000 00 00000 000 000000
Q ss_pred CccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 406 SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 406 sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
+....+.++++|+|+++|++|..+| ...++.+.+.+. .+++++++++||.+. .+..+.+.+.+.+++.+.
T Consensus 224 ~~~~~l~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~e~p~~~~~~i~~~~~~~ 293 (299)
T 3g9x_A 224 AYMNWLHQSPVPKLLFWGTPGVLIP--PAEAARLAESLP----NCKTVDIGPGLHYLQ-EDNPDLIGSEIARWLPAL 293 (299)
T ss_dssp HHHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHHHST----TEEEEEEEEESSCHH-HHCHHHHHHHHHHHSGGG
T ss_pred hhhhhcccCCCCeEEEecCCCCCCC--HHHHHHHHhhCC----CCeEEEeCCCCCcch-hcCHHHHHHHHHHHHhhh
Confidence 1112246789999999999999998 888877777663 378999999999875 355656666666665544
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.69 E-value=5.8e-17 Score=152.34 Aligned_cols=220 Identities=15% Similarity=0.139 Sum_probs=138.5
Q ss_pred ccEEEEEEcC-CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh------
Q 011049 223 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA------ 295 (494)
Q Consensus 223 ~~~~~~~~~~-dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------ 295 (494)
+.+.+++.+. -|.+...++|+|+++++. ..++|+|+++||..+ |.. .......++.
T Consensus 11 ~v~~~~~~S~~l~~~r~~~VylP~~y~~~-~~~yPVlylldG~~~---------------f~~-~~~~~~~l~~~~~~~~ 73 (331)
T 3gff_A 11 EYQSKRLESRLLKETREYVIALPEGYAQS-LEAYPVVYLLDGEDQ---------------FDH-MASLLQFLSQGTMPQI 73 (331)
T ss_dssp CEEEEEEEETTTTEEEEEEEECCTTGGGS-CCCEEEEEESSHHHH---------------HHH-HHHHHHHHTCSSSCSS
T ss_pred eEEEEEEEecCCCCeEEEEEEeCCCCCCC-CCCccEEEEecChhh---------------hHH-HHHHHHHHHhhhhcCC
Confidence 4677778775 478999999999998763 235999999999421 110 0011223332
Q ss_pred CCeEEEeCCCCC-------C------CCCCC------CCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHH
Q 011049 296 RRFAVLAGPSIP-------I------IGEGD------KLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAF 356 (494)
Q Consensus 296 ~G~~v~~~~~~~-------~------~g~g~------~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~ 356 (494)
.+++|+.+++.. . .|... ......+.....+ .++.++.++..+++.| +|+|+||||+
T Consensus 74 ~~~IvV~i~~~~R~~dytp~~~~~~~~G~~~~~~~~~~g~~~~~~~~l~~---el~p~i~~~~~~~~~r-~i~G~S~GG~ 149 (331)
T 3gff_A 74 PKVIIVGIHNTNRMRDYTPTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEK---ELAPSIESQLRTNGIN-VLVGHSFGGL 149 (331)
T ss_dssp CCCEEEEECCSSHHHHSCSSCCSBCTTSSBCCGGGGGCCCHHHHHHHHHH---THHHHHHHHSCEEEEE-EEEEETHHHH
T ss_pred CCEEEEEECCCCcccccCCCccccccccccccccCCCCCcHHHHHHHHHH---HHHHHHHHHCCCCCCe-EEEEECHHHH
Confidence 357777643310 0 01000 0011223333333 3455666666677655 7999999999
Q ss_pred HHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCc-cccccCCCCCEEEEecCCCC-------C
Q 011049 357 MTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSP-ITHANKIKKPILIIHGEVDD-------K 428 (494)
Q Consensus 357 ~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-~~~~~~~~~P~li~~G~~D~-------~ 428 (494)
++++++.++|++|+++++.+|...+ .....+..... +......+.|+++.||+.|. .
T Consensus 150 ~al~~~~~~p~~F~~~~~~S~~~w~---------------~~~~~~~~~~~~~~~~~~~~~~l~l~~G~~d~~~~~~~~~ 214 (331)
T 3gff_A 150 VAMEALRTDRPLFSAYLALDTSLWF---------------DSPHYLTLLEERVVKGDFKQKQLFMAIANNPLSPGFGVSS 214 (331)
T ss_dssp HHHHHHHTTCSSCSEEEEESCCTTT---------------TTTHHHHHHHHHHHHCCCSSEEEEEEECCCSEETTTEECC
T ss_pred HHHHHHHhCchhhheeeEeCchhcC---------------ChHHHHHHHHHHhhcccCCCCeEEEEeCCCCCCCccchHH
Confidence 9999999999999999999996431 11111111111 11112245799999999998 5
Q ss_pred CCCCHHHHHHHHHHHHhC---CCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 429 VGLFPMQAERFFDALKGH---GALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 429 v~~~~~~~~~~~~~l~~~---g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
++ ...+.+++++|++. |+++++.+||+++|+... ...+...++||-....
T Consensus 215 ~~--~~~~~~l~~~Lk~~~~~g~~~~~~~~pg~~H~sv~----~~~~~~~l~~lf~~~~ 267 (331)
T 3gff_A 215 YH--KDLNLAFADKLTKLAPKGLGFMAKYYPEETHQSVS----HIGLYDGIRHLFKDFA 267 (331)
T ss_dssp HH--HHHHHHHHHHHHHHCCTTEEEEEEECTTCCTTTHH----HHHHHHHHHHHHGGGC
T ss_pred HH--HHHHHHHHHHHHhccCCCceEEEEECCCCCccccH----HHHHHHHHHHHHhhcC
Confidence 55 77889999999986 778999999999997542 2334445555544443
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.6e-15 Score=139.41 Aligned_cols=198 Identities=12% Similarity=0.066 Sum_probs=125.3
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhH-HHHHhCCeEEEeCCCCCCCCCCCCCCC---chhHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSS-LIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEA 330 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~ 330 (494)
.|.||++||.+.... +...|. ... ..|++ .|.|+++|.+ |+|.+... ....+..++|+.+
T Consensus 33 g~~vvllHG~~~~~~--------~~~~w~----~~~~~~L~~-~~~vi~~D~~---G~G~S~~~~~~~~~~~~~a~dl~~ 96 (286)
T 2puj_A 33 GETVIMLHGGGPGAG--------GWSNYY----RNVGPFVDA-GYRVILKDSP---GFNKSDAVVMDEQRGLVNARAVKG 96 (286)
T ss_dssp SSEEEEECCCSTTCC--------HHHHHT----TTHHHHHHT-TCEEEEECCT---TSTTSCCCCCSSCHHHHHHHHHHH
T ss_pred CCcEEEECCCCCCCC--------cHHHHH----HHHHHHHhc-cCEEEEECCC---CCCCCCCCCCcCcCHHHHHHHHHH
Confidence 367999999641100 001122 123 45555 4999996654 56665432 2234556667666
Q ss_pred HHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC--C--CC-Cc---------cc--c---
Q 011049 331 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL--T--PF-GF---------QT--E--- 391 (494)
Q Consensus 331 ~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~--~--~~-~~---------~~--~--- 391 (494)
.++.+ + .+++.++||||||.+++.+|.++|++++++|++++...... . .. .. .. .
T Consensus 97 ~l~~l---~---~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (286)
T 2puj_A 97 LMDAL---D---IDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQ 170 (286)
T ss_dssp HHHHT---T---CCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHH
T ss_pred HHHHh---C---CCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHHHhhCCcHHHHHH
Confidence 65543 3 36899999999999999999999999999999887542110 0 00 00 00 0
Q ss_pred -------cccc---------cc----cHHH---HH---------hcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHH
Q 011049 392 -------FRTL---------WE----ATNV---YI---------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERF 439 (494)
Q Consensus 392 -------~~~~---------~~----~~~~---~~---------~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~ 439 (494)
.... +. .+.. +. ..+....+.++++|+|+++|++|..+| +..++++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p--~~~~~~~ 248 (286)
T 2puj_A 171 MLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVP--LDHGLKL 248 (286)
T ss_dssp HHHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSC--THHHHHH
T ss_pred HHHHHhcCCccCCHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCCccC--HHHHHHH
Confidence 0000 00 0000 00 012233567789999999999999988 7877777
Q ss_pred HHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 440 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 440 ~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
.+.+. ..++++++++||... .+....+.+.+.+||.+
T Consensus 249 ~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 249 LWNID----DARLHVFSKCGAWAQ-WEHADEFNRLVIDFLRH 285 (286)
T ss_dssp HHHSS----SEEEEEESSCCSCHH-HHTHHHHHHHHHHHHHH
T ss_pred HHHCC----CCeEEEeCCCCCCcc-ccCHHHHHHHHHHHHhc
Confidence 66553 479999999999865 35677888889999864
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=5e-16 Score=143.60 Aligned_cols=194 Identities=15% Similarity=0.092 Sum_probs=125.0
Q ss_pred cEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC--chhHHHHHHHHHHHHH
Q 011049 256 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVE 333 (494)
Q Consensus 256 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~v~ 333 (494)
|.||++||.+.+ ...| ......|+++||.|+++|.+ |+|.+... ....+...+|+.+.++
T Consensus 24 ~pvvllHG~~~~-----------~~~~----~~~~~~L~~~g~~vi~~D~~---G~G~S~~~~~~~~~~~~~~dl~~~l~ 85 (279)
T 1hkh_A 24 QPVVLIHGYPLD-----------GHSW----ERQTRELLAQGYRVITYDRR---GFGGSSKVNTGYDYDTFAADLHTVLE 85 (279)
T ss_dssp EEEEEECCTTCC-----------GGGG----HHHHHHHHHTTEEEEEECCT---TSTTSCCCSSCCSHHHHHHHHHHHHH
T ss_pred CcEEEEcCCCch-----------hhHH----hhhHHHHHhCCcEEEEeCCC---CCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 448999996521 1122 23455778899999996665 55555322 2234566788888877
Q ss_pred HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC-ceeEEEeCCCCCCCCCC----CCCccccc----------------
Q 011049 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-LFCCGIARSGSYNKTLT----PFGFQTEF---------------- 392 (494)
Q Consensus 334 ~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~-~~~a~v~~~~~~~~~~~----~~~~~~~~---------------- 392 (494)
.+ +.+++.++|||+||.+++.++.++|+ +++++|+.++....... ........
T Consensus 86 ~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (279)
T 1hkh_A 86 TL------DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWF 159 (279)
T ss_dssp HH------TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHH
T ss_pred hc------CCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhhhhH
Confidence 65 23689999999999999999999998 99999998874321100 00000000
Q ss_pred --------c-----cccccHH---HHH------------------hcCccccccCC---CCCEEEEecCCCCCCCCCHHH
Q 011049 393 --------R-----TLWEATN---VYI------------------EMSPITHANKI---KKPILIIHGEVDDKVGLFPMQ 435 (494)
Q Consensus 393 --------~-----~~~~~~~---~~~------------------~~sp~~~~~~~---~~P~li~~G~~D~~v~~~~~~ 435 (494)
. ......+ .+. ..+....+.++ ++|+|+++|++|..+| +..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~P~lii~G~~D~~~~--~~~ 237 (279)
T 1hkh_A 160 TDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILP--IDA 237 (279)
T ss_dssp HHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSC--TTT
T ss_pred HHHHhhhhhcccCCcccccHHHHHhhhhhhccCcHHHHHHHHHHHhhchhhhHHHhccCCCCEEEEEcCCCccCC--hHH
Confidence 0 0000000 000 01111234567 8999999999999987 666
Q ss_pred H-HHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 436 A-ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 436 ~-~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
+ +.+.+.+. +++++++++++|... .++.+.+.+.+.+||.
T Consensus 238 ~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 278 (279)
T 1hkh_A 238 TARRFHQAVP----EADYVEVEGAPHGLL-WTHADEVNAALKTFLA 278 (279)
T ss_dssp THHHHHHHCT----TSEEEEETTCCTTHH-HHTHHHHHHHHHHHHH
T ss_pred HHHHHHHhCC----CeeEEEeCCCCccch-hcCHHHHHHHHHHHhh
Confidence 5 56655543 468999999999875 3567788888999985
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=8.8e-16 Score=144.75 Aligned_cols=216 Identities=18% Similarity=0.171 Sum_probs=127.4
Q ss_pred EEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCC
Q 011049 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 304 (494)
Q Consensus 225 ~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 304 (494)
+...++..+|.++.+...-+++ .|.||++||++.... + ......+...||.|+++|
T Consensus 15 ~~~~~~~~~g~~l~~~~~g~~~--------g~~vvllHG~~~~~~------------~----~~~~~~~~~~~~~vi~~D 70 (317)
T 1wm1_A 15 DSGWLDTGDGHRIYWELSGNPN--------GKPAVFIHGGPGGGI------------S----PHHRQLFDPERYKVLLFD 70 (317)
T ss_dssp EEEEEECSSSCEEEEEEEECTT--------SEEEEEECCTTTCCC------------C----GGGGGGSCTTTEEEEEEC
T ss_pred eeeEEEcCCCcEEEEEEcCCCC--------CCcEEEECCCCCccc------------c----hhhhhhccccCCeEEEEC
Confidence 3345666688888766553321 356889999642110 0 011112335799999966
Q ss_pred CCCCCCCCCCCCC----chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCC
Q 011049 305 SIPIIGEGDKLPN----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 380 (494)
Q Consensus 305 ~~~~~g~g~~~~~----~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~ 380 (494)
.+ |+|.+... .......++|+.+.++.+ +.+++.++||||||.+++.+|.++|++++++|+.++...
T Consensus 71 ~~---G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 141 (317)
T 1wm1_A 71 QR---GCGRSRPHASLDNNTTWHLVADIERLREMA------GVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTL 141 (317)
T ss_dssp CT---TSTTCBSTTCCTTCSHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCC
T ss_pred CC---CCCCCCCCcccccccHHHHHHHHHHHHHHc------CCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCC
Confidence 54 55655332 112445566666555443 236799999999999999999999999999998765422
Q ss_pred CC-------------CC-----------CCCcccc--------c-c----------ccc-------------------cc
Q 011049 381 KT-------------LT-----------PFGFQTE--------F-R----------TLW-------------------EA 398 (494)
Q Consensus 381 ~~-------------~~-----------~~~~~~~--------~-~----------~~~-------------------~~ 398 (494)
.. .. ....... . . ..| ..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (317)
T 1wm1_A 142 RKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGE 221 (317)
T ss_dssp CHHHHHHHHTSSGGGTSHHHHHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGC
T ss_pred chhhhhHHhhccchhhcHHHHHHHHhhccchhhcchHHHHHhhhcCCCccccccccccccccccchhhccCCcccccccc
Confidence 10 00 0000000 0 0 000 00
Q ss_pred HH---H-------HHh-------cC-ccccccCCC-CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCC
Q 011049 399 TN---V-------YIE-------MS-PITHANKIK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEH 459 (494)
Q Consensus 399 ~~---~-------~~~-------~s-p~~~~~~~~-~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 459 (494)
+. . +.. .. ....+.+++ +|+|+++|++|..+| +..++.+.+.+. +.++++++++|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~G~~D~~~~--~~~~~~l~~~~p----~~~~~~i~~~g 295 (317)
T 1wm1_A 222 DDFALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQ--VQNAWDLAKAWP----EAELHIVEGAG 295 (317)
T ss_dssp HHHHHHHHHHHHHHHHTGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSC--HHHHHHHHHHCT----TSEEEEETTCC
T ss_pred cchhhhHHHhhhhhhhcccccccchhhHhhcccccCCCEEEEEecCCCCCC--HHHHHHHHhhCC----CceEEEECCCC
Confidence 00 0 000 00 123345674 999999999999987 888777777664 36899999999
Q ss_pred CccCCcccHHHHHHHHHHHH
Q 011049 460 HVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 460 H~~~~~~~~~~~~~~~~~fl 479 (494)
|.....+....+.+.+.+|+
T Consensus 296 H~~~~~~~~~~~~~~i~~f~ 315 (317)
T 1wm1_A 296 HSYDEPGILHQLMIATDRFA 315 (317)
T ss_dssp SSTTSHHHHHHHHHHHHHHT
T ss_pred CCCCCcchHHHHHHHHHHHh
Confidence 98643223445555555554
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.68 E-value=3e-16 Score=148.99 Aligned_cols=206 Identities=13% Similarity=0.085 Sum_probs=129.4
Q ss_pred CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCC
Q 011049 233 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 312 (494)
Q Consensus 233 dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g 312 (494)
++..+.+..+-+. .|+||++||.+.. ...| ...+...||.|+++|.+ |+|
T Consensus 68 ~~~~~~~~~~g~~---------~~~vv~~hG~~~~-----------~~~~-------~~~~~~lg~~Vi~~D~~---G~G 117 (330)
T 3p2m_A 68 QAGAISALRWGGS---------APRVIFLHGGGQN-----------AHTW-------DTVIVGLGEPALAVDLP---GHG 117 (330)
T ss_dssp EETTEEEEEESSS---------CCSEEEECCTTCC-----------GGGG-------HHHHHHSCCCEEEECCT---TST
T ss_pred cCceEEEEEeCCC---------CCeEEEECCCCCc-----------cchH-------HHHHHHcCCeEEEEcCC---CCC
Confidence 3446777666332 4779999997521 1112 22334559999996665 455
Q ss_pred CCCC---CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCC--------
Q 011049 313 DKLP---NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK-------- 381 (494)
Q Consensus 313 ~~~~---~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~-------- 381 (494)
.+.. ........++|+.++++.+ +.+++.++|||+||.+++.++.++|++++++|++++....
T Consensus 118 ~S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 191 (330)
T 3p2m_A 118 HSAWREDGNYSPQLNSETLAPVLREL------APGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELT 191 (330)
T ss_dssp TSCCCSSCBCCHHHHHHHHHHHHHHS------STTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHT
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh------CCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhh
Confidence 5431 1223455667766666554 3468999999999999999999999999999999865220
Q ss_pred -CCC--------CCCccccc--------ccccccHHHHHh---c------------------------CccccccCCCCC
Q 011049 382 -TLT--------PFGFQTEF--------RTLWEATNVYIE---M------------------------SPITHANKIKKP 417 (494)
Q Consensus 382 -~~~--------~~~~~~~~--------~~~~~~~~~~~~---~------------------------sp~~~~~~~~~P 417 (494)
... ...+.... ..+....+.+.. . +....+.++++|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 271 (330)
T 3p2m_A 192 AEQRGTVALMHGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAP 271 (330)
T ss_dssp CC-----------CCBSCHHHHHHHHHHHCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSC
T ss_pred hhhhhhhhhhcCCccccCHHHHHHHHHhcCCCCCHHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCC
Confidence 000 00000000 000000000000 0 001235678999
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEE-EEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 418 ILIIHGEVDDKVGLFPMQAERFFDALKGHGALSR-LVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 418 ~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
+|+++|++|..+| ...++.+.+.+. ..+ ++++++++|.+. .+..+.+.+.+.+||++
T Consensus 272 vLii~G~~D~~v~--~~~~~~l~~~~~----~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 272 ITLVRGGSSGFVT--DQDTAELHRRAT----HFRGVHIVEKSGHSVQ-SDQPRALIEIVRGVLDT 329 (330)
T ss_dssp EEEEEETTCCSSC--HHHHHHHHHHCS----SEEEEEEETTCCSCHH-HHCHHHHHHHHHHHTTC
T ss_pred EEEEEeCCCCCCC--HHHHHHHHHhCC----CCeeEEEeCCCCCCcc-hhCHHHHHHHHHHHHhc
Confidence 9999999999998 888777776653 357 999999999875 35667778888888754
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=99.67 E-value=7.8e-16 Score=142.67 Aligned_cols=213 Identities=13% Similarity=0.104 Sum_probs=133.1
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
.+|.++.+... + + .|.||++||.+.+. ..+..+. .....| +++|.|+++|.+ |+
T Consensus 12 ~~g~~l~y~~~---G-----~--g~~vvllHG~~~~~-----------~~~~~w~-~~~~~L-~~~~~vi~~Dl~---G~ 65 (282)
T 1iup_A 12 AAGVLTNYHDV---G-----E--GQPVILIHGSGPGV-----------SAYANWR-LTIPAL-SKFYRVIAPDMV---GF 65 (282)
T ss_dssp ETTEEEEEEEE---C-----C--SSEEEEECCCCTTC-----------CHHHHHT-TTHHHH-TTTSEEEEECCT---TS
T ss_pred ECCEEEEEEec---C-----C--CCeEEEECCCCCCc-----------cHHHHHH-HHHHhh-ccCCEEEEECCC---CC
Confidence 47777776553 1 1 35799999953111 1011111 122233 789999996654 56
Q ss_pred CCCCCCc---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC---
Q 011049 312 GDKLPND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP--- 385 (494)
Q Consensus 312 g~~~~~~---~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~--- 385 (494)
|.+.... ...+..++|+.+.++.+ + .+++.++|||+||.+++.+|.++|++++++|++++........
T Consensus 66 G~S~~~~~~~~~~~~~a~dl~~~l~~l---~---~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~ 139 (282)
T 1iup_A 66 GFTDRPENYNYSKDSWVDHIIGIMDAL---E---IEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGL 139 (282)
T ss_dssp TTSCCCTTCCCCHHHHHHHHHHHHHHT---T---CCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHh---C---CCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHH
Confidence 6554321 22456667776666553 3 3689999999999999999999999999999988754311000
Q ss_pred ---CCccc--c-----------cccc---------c---ccH---HHHHhc-------------CccccccCCCCCEEEE
Q 011049 386 ---FGFQT--E-----------FRTL---------W---EAT---NVYIEM-------------SPITHANKIKKPILII 421 (494)
Q Consensus 386 ---~~~~~--~-----------~~~~---------~---~~~---~~~~~~-------------sp~~~~~~~~~P~li~ 421 (494)
+.+.. . .... + ..+ ..+... .+...+.++++|+|++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii 219 (282)
T 1iup_A 140 NAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLII 219 (282)
T ss_dssp HHHHTCCSCHHHHHHHHHHHCSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEE
T ss_pred HHHhcCCCcHHHHHHHHHHhhcCcccCCHHHHHHHHhhccChHHHHHHHHHHhccccccccccccchhhhhhcCCCEEEE
Confidence 00000 0 0000 0 000 001000 0113466789999999
Q ss_pred ecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 422 HGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 422 ~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
+|++|..+| ...++++.+.+. ..++++++++||... .+..+.+.+.+.+||.+..
T Consensus 220 ~G~~D~~~p--~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~~ 274 (282)
T 1iup_A 220 HGREDQVVP--LSSSLRLGELID----RAQLHVFGRCGHWTQ-IEQTDRFNRLVVEFFNEAN 274 (282)
T ss_dssp EETTCSSSC--HHHHHHHHHHCT----TEEEEEESSCCSCHH-HHSHHHHHHHHHHHHHTC-
T ss_pred ecCCCCCCC--HHHHHHHHHhCC----CCeEEEECCCCCCcc-ccCHHHHHHHHHHHHhcCC
Confidence 999999988 887777766553 478999999999865 3567788889999998643
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.7e-15 Score=143.55 Aligned_cols=218 Identities=18% Similarity=0.216 Sum_probs=134.4
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 308 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 308 (494)
+...+|.++.+...- + .|.||++||.+.+ ...| ......|+++||.|+++|.+
T Consensus 15 ~~~~~g~~l~y~~~G--------~--g~~vvllHG~~~~-----------~~~w----~~~~~~L~~~g~~via~Dl~-- 67 (328)
T 2cjp_A 15 MVAVNGLNMHLAELG--------E--GPTILFIHGFPEL-----------WYSW----RHQMVYLAERGYRAVAPDLR-- 67 (328)
T ss_dssp EEEETTEEEEEEEEC--------S--SSEEEEECCTTCC-----------GGGG----HHHHHHHHTTTCEEEEECCT--
T ss_pred EecCCCcEEEEEEcC--------C--CCEEEEECCCCCc-----------hHHH----HHHHHHHHHCCcEEEEECCC--
Confidence 334578788776541 1 3789999996521 1112 12344677889999996554
Q ss_pred CCCCCCCCC------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCC
Q 011049 309 IGEGDKLPN------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT 382 (494)
Q Consensus 309 ~g~g~~~~~------~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~ 382 (494)
|+|.+... ....+..++|+.+.++.+.. +.+++.++||||||.+++.+|.++|++++++|++++.....
T Consensus 68 -G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~----~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~ 142 (328)
T 2cjp_A 68 -GYGDTTGAPLNDPSKFSILHLVGDVVALLEAIAP----NEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKR 142 (328)
T ss_dssp -TSTTCBCCCTTCGGGGSHHHHHHHHHHHHHHHCT----TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCC
T ss_pred -CCCCCCCcCcCCcccccHHHHHHHHHHHHHHhcC----CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCCCcc
Confidence 56665432 12256678888888777621 23689999999999999999999999999999877542110
Q ss_pred CC--CC---------------Ccccc-------------------c----c---------------------cccccHH-
Q 011049 383 LT--PF---------------GFQTE-------------------F----R---------------------TLWEATN- 400 (494)
Q Consensus 383 ~~--~~---------------~~~~~-------------------~----~---------------------~~~~~~~- 400 (494)
.. .. .+... . . ..|-..+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (328)
T 2cjp_A 143 NPKMNVVEGLKAIYGEDHYISRFQVPGEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEE 222 (328)
T ss_dssp CSSCCHHHHHHHHHCTTBHHHHTSSTTHHHHHHHHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHHH
T ss_pred cccCChHHHHHhhcccchHHHhhhCCCcHHHHhhccCHHHHHHHHhcccCCCcccccccchhhhcccccccCcCCCCHHH
Confidence 00 00 00000 0 0 0000000
Q ss_pred --HHH----h------------cC------ccccccCCCCCEEEEecCCCCCCCCCHHHHHHHH--HHHHhCCCcE-EEE
Q 011049 401 --VYI----E------------MS------PITHANKIKKPILIIHGEVDDKVGLFPMQAERFF--DALKGHGALS-RLV 453 (494)
Q Consensus 401 --~~~----~------------~s------p~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~--~~l~~~g~~~-~~~ 453 (494)
.+. . .. ....+.++++|+|+++|++|..+| +..+.++. +.+.+.-... ++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~~~~~~p~~~~~~ 300 (328)
T 2cjp_A 223 LDYYANKFEQTGFTGAVNYYRALPINWELTAPWTGAQVKVPTKFIVGEFDLVYH--IPGAKEYIHNGGFKKDVPLLEEVV 300 (328)
T ss_dssp HHHHHHHHHHHCSHHHHHHHHTHHHHHHHTGGGTTCCCCSCEEEEEETTCGGGG--STTHHHHHHHSHHHHHSTTBCCCE
T ss_pred HHHHHHHhcccCCcchHHHHHhcccchhhhhhccCCccCCCEEEEEeCCccccc--CcchhhhhhhhhHHHHhcCCeeEE
Confidence 000 0 00 001246788999999999999986 54333332 3444433345 789
Q ss_pred EcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 454 LLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 454 ~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
+++++||... .+..+.+.+.+.+||.+
T Consensus 301 ~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 327 (328)
T 2cjp_A 301 VLEGAAHFVS-QERPHEISKHIYDFIQK 327 (328)
T ss_dssp EETTCCSCHH-HHSHHHHHHHHHHHHTT
T ss_pred EcCCCCCCcc-hhCHHHHHHHHHHHHHh
Confidence 9999999876 35677888889999853
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.1e-15 Score=132.67 Aligned_cols=127 Identities=14% Similarity=0.120 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHH
Q 011049 322 EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNV 401 (494)
Q Consensus 322 ~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (494)
.+..+|+.++++.+ + +++.++|||+||.+++.++.++|++++++|+++|...... . +
T Consensus 59 ~~~~~~~~~~~~~~------~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~---~--------~----- 115 (191)
T 3bdv_A 59 DRWVLAIRRELSVC------T-QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRF---E--------I----- 115 (191)
T ss_dssp HHHHHHHHHHHHTC------S-SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGG---T--------C-----
T ss_pred HHHHHHHHHHHHhc------C-CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCccccc---c--------C-----
Confidence 44555555555432 3 7899999999999999999999999999999998643210 0 0
Q ss_pred HHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcc--cHHHHHHHHHHHH
Q 011049 402 YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE--NVMHVIWETDRWL 479 (494)
Q Consensus 402 ~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~--~~~~~~~~~~~fl 479 (494)
.+...+.++++|+|+++|++|..+| +..++++.+.+ +++++++++++|.+.... ...+..+.+.+||
T Consensus 116 ----~~~~~~~~~~~P~lii~g~~D~~~~--~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl 184 (191)
T 3bdv_A 116 ----DDRIQASPLSVPTLTFASHNDPLMS--FTRAQYWAQAW-----DSELVDVGEAGHINAEAGFGPWEYGLKRLAEFS 184 (191)
T ss_dssp ----TTTSCSSCCSSCEEEEECSSBTTBC--HHHHHHHHHHH-----TCEEEECCSCTTSSGGGTCSSCHHHHHHHHHHH
T ss_pred ----ccccccccCCCCEEEEecCCCCcCC--HHHHHHHHHhc-----CCcEEEeCCCCcccccccchhHHHHHHHHHHHH
Confidence 0013456788999999999999998 88888888876 368999999999875321 3345558888888
Q ss_pred HHh
Q 011049 480 QKY 482 (494)
Q Consensus 480 ~~~ 482 (494)
++.
T Consensus 185 ~~~ 187 (191)
T 3bdv_A 185 EIL 187 (191)
T ss_dssp HTT
T ss_pred HHh
Confidence 765
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.67 E-value=4.3e-16 Score=149.39 Aligned_cols=179 Identities=16% Similarity=0.064 Sum_probs=115.7
Q ss_pred hHHHHHhCCeEEEeCCCCCCCCCCCCCCC---------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHH
Q 011049 289 SSLIFLARRFAVLAGPSIPIIGEGDKLPN---------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTA 359 (494)
Q Consensus 289 ~~~~l~~~G~~v~~~~~~~~~g~g~~~~~---------~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~ 359 (494)
....|+++||.|+.++.+ |+|.+... .......++|+.++++++.++ .+.+++.++|||+||.+++
T Consensus 85 ~~~~l~~~g~~v~~~d~~---G~G~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~~~l~G~S~Gg~~a~ 159 (354)
T 2rau_A 85 IVLYLARNGFNVYTIDYR---THYVPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRD--SGQERIYLAGESFGGIAAL 159 (354)
T ss_dssp HHHHHHHTTEEEEEEECG---GGGCCTTCCGGGGGGGTTCSHHHHHHHHHHHHHHHHHH--HCCSSEEEEEETHHHHHHH
T ss_pred HHHHHHhCCCEEEEecCC---CCCCCCcccccccccccCCcHHHHHHHHHHHHHHHHHh--cCCceEEEEEECHhHHHHH
Confidence 456788899999996665 44444321 112356688999999998876 2347899999999999999
Q ss_pred HHHHhC-CCceeEEEeCCCCCCC--CCCCC-----------------------Ccc----------------c-c--ccc
Q 011049 360 HLLAHA-PHLFCCGIARSGSYNK--TLTPF-----------------------GFQ----------------T-E--FRT 394 (494)
Q Consensus 360 ~~~~~~-p~~~~a~v~~~~~~~~--~~~~~-----------------------~~~----------------~-~--~~~ 394 (494)
.++.++ |++++++|++++.... ....+ .+. . . ...
T Consensus 160 ~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (354)
T 2rau_A 160 NYSSLYWKNDIKGLILLDGGPTKHGIRPKFYTPEVNSIEEMEAKGIYVIPSRGGPNNPIWSYALANPDMPSPDPKYKSIS 239 (354)
T ss_dssp HHHHHHHHHHEEEEEEESCSCBCTTCC--CCCCSCSSHHHHHHHTCCEEECSSSTTCTHHHHHHHSTTSCCSSTTSSSHH
T ss_pred HHHHhcCccccceEEEecccccccCcccchhhhhhhhHHHhhhhcccccCCCchhhhHHHHHhccccccCccccchhhHH
Confidence 999998 9999999998653211 00000 000 0 0 000
Q ss_pred ccccHHHH----------------------------------HhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHH
Q 011049 395 LWEATNVY----------------------------------IEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFF 440 (494)
Q Consensus 395 ~~~~~~~~----------------------------------~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~ 440 (494)
.|-....+ ...+....+.++++|+|+++|++|..+| ..+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p---~~~---- 312 (354)
T 2rau_A 240 DFLMDSLYVTGSANPYDYPYSKKEDMFPILASFDPYWPYRLSLERDLKFDYEGILVPTIAFVSERFGIQI---FDS---- 312 (354)
T ss_dssp HHHHHHHHHTTSCCTTSTTCCCHHHHHHHHHTSCSEEEHHHHHTTTCCCCCTTCCCCEEEEEETTTHHHH---BCG----
T ss_pred HHHHHhhhccccCCcccCCCccHHHHHHHHhhhccccccccccCcccccccccCCCCEEEEecCCCCCCc---cch----
Confidence 00000000 0112233456889999999999998653 222
Q ss_pred HHHHhCCCcEEEEEcCCCCCccCC--cccHHHHHHHHHHHHHHh
Q 011049 441 DALKGHGALSRLVLLPFEHHVYAA--RENVMHVIWETDRWLQKY 482 (494)
Q Consensus 441 ~~l~~~g~~~~~~~~~~~~H~~~~--~~~~~~~~~~~~~fl~~~ 482 (494)
+ ......++++++++||.... .+....+.+.+.+||+++
T Consensus 313 ~---~l~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 353 (354)
T 2rau_A 313 K---ILPSNSEIILLKGYGHLDVYTGENSEKDVNSVVLKWLSQQ 353 (354)
T ss_dssp G---GSCTTCEEEEETTCCGGGGTSSTTHHHHTHHHHHHHHHHH
T ss_pred h---hhccCceEEEcCCCCCchhhcCCCcHHHHHHHHHHHHHhc
Confidence 1 22245699999999998642 344578889999999875
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.66 E-value=2.6e-15 Score=140.21 Aligned_cols=219 Identities=14% Similarity=0.123 Sum_probs=132.8
Q ss_pred cCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCC
Q 011049 231 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 310 (494)
Q Consensus 231 ~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g 310 (494)
..+|.++.+... + . .|.||++||.+.+.. +...|. .....|+ ++|.|+++|.+ |
T Consensus 22 ~~~g~~l~y~~~---g-----~--g~~vvllHG~~~~~~--------~~~~~~----~~~~~L~-~~~~vi~~Dl~---G 75 (296)
T 1j1i_A 22 NAGGVETRYLEA---G-----K--GQPVILIHGGGAGAE--------SEGNWR----NVIPILA-RHYRVIAMDML---G 75 (296)
T ss_dssp EETTEEEEEEEE---C-----C--SSEEEEECCCSTTCC--------HHHHHT----TTHHHHT-TTSEEEEECCT---T
T ss_pred EECCEEEEEEec---C-----C--CCeEEEECCCCCCcc--------hHHHHH----HHHHHHh-hcCEEEEECCC---C
Confidence 357877776543 1 1 367999999642110 001122 1233444 45999996654 5
Q ss_pred CCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC---
Q 011049 311 EGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP--- 385 (494)
Q Consensus 311 ~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~--- 385 (494)
+|.+... ....+..++|+.+.++.+ + + .+++.|+||||||.+++.++.++|++++++|++++........
T Consensus 76 ~G~S~~~~~~~~~~~~~~dl~~~l~~l---~-~-~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~ 150 (296)
T 1j1i_A 76 FGKTAKPDIEYTQDRRIRHLHDFIKAM---N-F-DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDL 150 (296)
T ss_dssp STTSCCCSSCCCHHHHHHHHHHHHHHS---C-C-SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC-----
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHhc---C-C-CCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchH
Confidence 5555421 122455566666555443 2 2 2689999999999999999999999999999988754211000
Q ss_pred ---CCccc--c-----------ccc---------ccc---c---HHHHHh-----------cCccccccCCCCCEEEEec
Q 011049 386 ---FGFQT--E-----------FRT---------LWE---A---TNVYIE-----------MSPITHANKIKKPILIIHG 423 (494)
Q Consensus 386 ---~~~~~--~-----------~~~---------~~~---~---~~~~~~-----------~sp~~~~~~~~~P~li~~G 423 (494)
+.+.. . ... .+. . ...+.. ......+.++++|+|+++|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G 230 (296)
T 1j1i_A 151 RPIINYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQG 230 (296)
T ss_dssp -----CCSCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEE
T ss_pred HHHhcccCCchHHHHHHHHhccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEE
Confidence 00000 0 000 000 0 000100 0112245778999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCCCC
Q 011049 424 EVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 424 ~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~ 487 (494)
++|..+| +..+.++.+.+. ..++++++++||... .+..+.+.+.+.+||.+++...+
T Consensus 231 ~~D~~~~--~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~~~~~~ 287 (296)
T 1j1i_A 231 KDDKVVP--VETAYKFLDLID----DSWGYIIPHCGHWAM-IEHPEDFANATLSFLSLRVDITP 287 (296)
T ss_dssp TTCSSSC--HHHHHHHHHHCT----TEEEEEESSCCSCHH-HHSHHHHHHHHHHHHHHC-----
T ss_pred CCCcccC--HHHHHHHHHHCC----CCEEEEECCCCCCch-hcCHHHHHHHHHHHHhccCCcCc
Confidence 9999988 888777766553 478999999999876 36677888999999999876543
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=99.66 E-value=2.4e-15 Score=140.53 Aligned_cols=212 Identities=14% Similarity=0.067 Sum_probs=126.5
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 308 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 308 (494)
+...+|.++.+...- ..|+||++||.+.+ ...|. .....|++ ||.|++++.+
T Consensus 17 ~~~~~g~~l~~~~~g----------~~~~vv~lHG~~~~-----------~~~~~----~~~~~l~~-~~~v~~~D~~-- 68 (306)
T 3r40_A 17 WINTSSGRIFARVGG----------DGPPLLLLHGFPQT-----------HVMWH----RVAPKLAE-RFKVIVADLP-- 68 (306)
T ss_dssp EECCTTCCEEEEEEE----------CSSEEEEECCTTCC-----------GGGGG----GTHHHHHT-TSEEEEECCT--
T ss_pred EEEeCCEEEEEEEcC----------CCCeEEEECCCCCC-----------HHHHH----HHHHHhcc-CCeEEEeCCC--
Confidence 344688888877642 14789999997521 12232 23445555 9999996665
Q ss_pred CCCCCCCCCc-------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCC
Q 011049 309 IGEGDKLPND-------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 381 (494)
Q Consensus 309 ~g~g~~~~~~-------~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~ 381 (494)
|+|.+.... ...++.++|+.+.++.+ +.+++.++|||+||.+++.++.++|++++++|++++....
T Consensus 69 -G~G~S~~~~~~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 141 (306)
T 3r40_A 69 -GYGWSDMPESDEQHTPYTKRAMAKQLIEAMEQL------GHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTY 141 (306)
T ss_dssp -TSTTSCCCCCCTTCGGGSHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHH
T ss_pred -CCCCCCCCCCCcccCCCCHHHHHHHHHHHHHHh------CCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCc
Confidence 455543321 23455666766666553 3368999999999999999999999999999999874210
Q ss_pred CC-------------------CC-----------------------------CCcccccc----cccccH-------HHH
Q 011049 382 TL-------------------TP-----------------------------FGFQTEFR----TLWEAT-------NVY 402 (494)
Q Consensus 382 ~~-------------------~~-----------------------------~~~~~~~~----~~~~~~-------~~~ 402 (494)
.. .. ..+..+.. ..+..+ ..+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (306)
T 3r40_A 142 EYWQRMNRAYALKIYHWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDY 221 (306)
T ss_dssp HHHHHCSHHHHHHSTHHHHHTSCTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred cchhhhhhhhhhhhHHHHHhhcccchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCCcchhhHHH
Confidence 00 00 00000000 000000 000
Q ss_pred Hhc---------CccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHH
Q 011049 403 IEM---------SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIW 473 (494)
Q Consensus 403 ~~~---------sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~ 473 (494)
... .....+.++++|+|+++|++|..+| .....+..+.+. .++++.++ ++||.+. .+..+.+.+
T Consensus 222 ~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~--~~~~~~~~~~~~---~~~~~~~~-~~gH~~~-~e~p~~~~~ 294 (306)
T 3r40_A 222 RAGAYADFEHDKIDVEAGNKIPVPMLALWGASGIAQS--AATPLDVWRKWA---SDVQGAPI-ESGHFLP-EEAPDQTAE 294 (306)
T ss_dssp HHHHTHHHHHHHHHHHHTCCBCSCEEEEEETTCC--------CHHHHHHHB---SSEEEEEE-SSCSCHH-HHSHHHHHH
T ss_pred HhcccccchhhhhhhhhccCCCcceEEEEecCCcccC--chhHHHHHHhhc---CCCeEEEe-cCCcCch-hhChHHHHH
Confidence 000 0001347789999999999999886 555544444443 34677777 6799865 466778888
Q ss_pred HHHHHHHHh
Q 011049 474 ETDRWLQKY 482 (494)
Q Consensus 474 ~~~~fl~~~ 482 (494)
.+.+||++.
T Consensus 295 ~i~~fl~~~ 303 (306)
T 3r40_A 295 ALVRFFSAA 303 (306)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHhc
Confidence 899999864
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.66 E-value=2.7e-15 Score=141.16 Aligned_cols=121 Identities=15% Similarity=0.054 Sum_probs=79.5
Q ss_pred EEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCC
Q 011049 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 304 (494)
Q Consensus 225 ~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 304 (494)
+...++..+|.++.+...-+++ .|.||++||++.+.. + ......+..+||.|+++|
T Consensus 12 ~~~~~~~~~g~~l~y~~~G~~~--------g~pvvllHG~~~~~~------------~----~~~~~~~~~~~~~vi~~D 67 (313)
T 1azw_A 12 QQGSLKVDDRHTLYFEQCGNPH--------GKPVVMLHGGPGGGC------------N----DKMRRFHDPAKYRIVLFD 67 (313)
T ss_dssp EEEEEECSSSCEEEEEEEECTT--------SEEEEEECSTTTTCC------------C----GGGGGGSCTTTEEEEEEC
T ss_pred ccceEEcCCCCEEEEEecCCCC--------CCeEEEECCCCCccc------------c----HHHHHhcCcCcceEEEEC
Confidence 3445666688888776654321 356899999642110 0 011112335799999966
Q ss_pred CCCCCCCCCCCCC----chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC
Q 011049 305 SIPIIGEGDKLPN----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 305 ~~~~~g~g~~~~~----~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 378 (494)
.+ |+|.+... .......++|+.+.++.+ + -+++.++||||||.+++.++.++|++++++|+.++.
T Consensus 68 ~~---G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l---~---~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~ 136 (313)
T 1azw_A 68 QR---GSGRSTPHADLVDNTTWDLVADIERLRTHL---G---VDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIF 136 (313)
T ss_dssp CT---TSTTSBSTTCCTTCCHHHHHHHHHHHHHHT---T---CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred CC---CCcCCCCCcccccccHHHHHHHHHHHHHHh---C---CCceEEEEECHHHHHHHHHHHhChhheeEEEEeccc
Confidence 54 56665432 122455666766665543 3 367999999999999999999999999999987764
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=8.8e-16 Score=141.39 Aligned_cols=197 Identities=16% Similarity=0.175 Sum_probs=125.6
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC----c--hhHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN----D--RFVEQLVSSA 328 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~----~--~~~~~~~~d~ 328 (494)
.|.||++||.+.+ ...|... ...| +.+|.|+++|.+ |+|.+... . ...+..++|+
T Consensus 20 ~~~vvllHG~~~~-----------~~~w~~~----~~~L-~~~~~vi~~Dl~---G~G~S~~~~~~~~~~~~~~~~a~dl 80 (271)
T 1wom_A 20 KASIMFAPGFGCD-----------QSVWNAV----APAF-EEDHRVILFDYV---GSGHSDLRAYDLNRYQTLDGYAQDV 80 (271)
T ss_dssp SSEEEEECCTTCC-----------GGGGTTT----GGGG-TTTSEEEECCCS---CCSSSCCTTCCTTGGGSHHHHHHHH
T ss_pred CCcEEEEcCCCCc-----------hhhHHHH----HHHH-HhcCeEEEECCC---CCCCCCCCcccccccccHHHHHHHH
Confidence 3789999996521 1223322 2233 457999995554 56655332 1 1245667777
Q ss_pred HHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC--C--Ccccc-----------cc
Q 011049 329 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP--F--GFQTE-----------FR 393 (494)
Q Consensus 329 ~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~--~--~~~~~-----------~~ 393 (494)
.+.++.+ + .+++.++||||||.+++.++.++|++++++|++++........ + .+... ..
T Consensus 81 ~~~l~~l---~---~~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (271)
T 1wom_A 81 LDVCEAL---D---LKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNY 154 (271)
T ss_dssp HHHHHHT---T---CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCH
T ss_pred HHHHHHc---C---CCCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhH
Confidence 7666554 2 3689999999999999999999999999999987742110000 0 00000 00
Q ss_pred ccc------------ccH---H----HHHh---------------cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHH
Q 011049 394 TLW------------EAT---N----VYIE---------------MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERF 439 (494)
Q Consensus 394 ~~~------------~~~---~----~~~~---------------~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~ 439 (494)
..| ..+ + .+.. .+....+.++++|+|+++|++|..+| ...++.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~--~~~~~~~ 232 (271)
T 1wom_A 155 IGWATVFAATVLNQPDRPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAP--ATVGKYM 232 (271)
T ss_dssp HHHHHHHHHHHHCCTTCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSC--HHHHHHH
T ss_pred HHHHHHHHHHHhcCCCchHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCC--HHHHHHH
Confidence 000 000 0 0001 11223456789999999999999987 7776666
Q ss_pred HHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 440 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 440 ~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
.+.+. ..++++++++||... .+..+.+.+.+.+||.+++
T Consensus 233 ~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~~ 271 (271)
T 1wom_A 233 HQHLP----YSSLKQMEARGHCPH-MSHPDETIQLIGDYLKAHV 271 (271)
T ss_dssp HHHSS----SEEEEEEEEESSCHH-HHCHHHHHHHHHHHHHHHC
T ss_pred HHHCC----CCEEEEeCCCCcCcc-ccCHHHHHHHHHHHHHhcC
Confidence 65543 378999999999875 3567788899999998764
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=99.66 E-value=3.6e-15 Score=138.83 Aligned_cols=215 Identities=15% Similarity=0.106 Sum_probs=133.5
Q ss_pred EEcCCC-ceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC
Q 011049 229 YQRKDG-VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 307 (494)
Q Consensus 229 ~~~~dg-~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~ 307 (494)
+...+| .++.+...- +++.|.||++||.+.+. .+...|. .....|++ .|.|+++|.+
T Consensus 17 ~~~~~g~~~l~y~~~G--------~g~~~~vvllHG~~pg~--------~~~~~w~----~~~~~L~~-~~~via~Dl~- 74 (291)
T 2wue_A 17 EVDVDGPLKLHYHEAG--------VGNDQTVVLLHGGGPGA--------ASWTNFS----RNIAVLAR-HFHVLAVDQP- 74 (291)
T ss_dssp EEESSSEEEEEEEEEC--------TTCSSEEEEECCCCTTC--------CHHHHTT----TTHHHHTT-TSEEEEECCT-
T ss_pred EEEeCCcEEEEEEecC--------CCCCCcEEEECCCCCcc--------chHHHHH----HHHHHHHh-cCEEEEECCC-
Confidence 334588 788776542 12246899999963100 0001122 23334554 4999995554
Q ss_pred CCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC-
Q 011049 308 IIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL- 383 (494)
Q Consensus 308 ~~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~- 383 (494)
|+|.+... ....+..++|+.+.++.+ + .+++.|+|||+||.+++.+|.++|++++++|++++......
T Consensus 75 --G~G~S~~~~~~~~~~~~~a~dl~~~l~~l---~---~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~ 146 (291)
T 2wue_A 75 --GYGHSDKRAEHGQFNRYAAMALKGLFDQL---G---LGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINL 146 (291)
T ss_dssp --TSTTSCCCSCCSSHHHHHHHHHHHHHHHH---T---CCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCS
T ss_pred --CCCCCCCCCCCCcCHHHHHHHHHHHHHHh---C---CCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccc
Confidence 56665432 223456677777666654 3 36899999999999999999999999999999887542110
Q ss_pred -CC--C-Ccc--------c--cc---------ccc-----------c---ccHHHH---Hh-----cC-----cc--ccc
Q 011049 384 -TP--F-GFQ--------T--EF---------RTL-----------W---EATNVY---IE-----MS-----PI--THA 411 (494)
Q Consensus 384 -~~--~-~~~--------~--~~---------~~~-----------~---~~~~~~---~~-----~s-----p~--~~~ 411 (494)
.. . ... . .. ..+ + ..+..+ .. .+ .. ..+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 226 (291)
T 2wue_A 147 FAPDPTEGVKRLSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREV 226 (291)
T ss_dssp SSCSSCHHHHHHHHHHHSCCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTG
T ss_pred cccccchhhHHHHHHhccCCHHHHHHHHHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHH
Confidence 00 0 000 0 00 000 0 000000 00 00 11 456
Q ss_pred cCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 412 NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 412 ~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
.++++|+|+++|++|..+| ...++++.+.+. ..++++++++||.... +..+.+.+.+.+||.
T Consensus 227 ~~i~~P~lvi~G~~D~~~~--~~~~~~~~~~~p----~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~ 288 (291)
T 2wue_A 227 YRLRQPVLLIWGREDRVNP--LDGALVALKTIP----RAQLHVFGQCGHWVQV-EKFDEFNKLTIEFLG 288 (291)
T ss_dssp GGCCSCEEEEEETTCSSSC--GGGGHHHHHHST----TEEEEEESSCCSCHHH-HTHHHHHHHHHHHTT
T ss_pred hhCCCCeEEEecCCCCCCC--HHHHHHHHHHCC----CCeEEEeCCCCCChhh-hCHHHHHHHHHHHHh
Confidence 7789999999999999987 777777666553 4789999999998653 556677788888875
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.6e-15 Score=138.34 Aligned_cols=196 Identities=14% Similarity=0.085 Sum_probs=122.3
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND-RFVEQLVSSAEAAVE 333 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~-~~~~~~~~d~~~~v~ 333 (494)
.|.||++||.+. +...|. .....|++ .|.|+++|.+ |+|.+.... ...+..++|+.+.++
T Consensus 16 ~~~vvllHG~~~-----------~~~~w~----~~~~~L~~-~~~via~Dl~---G~G~S~~~~~~~~~~~a~dl~~~l~ 76 (255)
T 3bf7_A 16 NSPIVLVHGLFG-----------SLDNLG----VLARDLVN-DHNIIQVDVR---NHGLSPREPVMNYPAMAQDLVDTLD 76 (255)
T ss_dssp CCCEEEECCTTC-----------CTTTTH----HHHHHHTT-TSCEEEECCT---TSTTSCCCSCCCHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCcc-----------cHhHHH----HHHHHHHh-hCcEEEecCC---CCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 467999999652 112232 23334544 4999996654 556554322 224566778777777
Q ss_pred HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC-CCCCCCC-------------Ccccc------cc
Q 011049 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY-NKTLTPF-------------GFQTE------FR 393 (494)
Q Consensus 334 ~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~-~~~~~~~-------------~~~~~------~~ 393 (494)
.+ + .+++.++|||+||.+++.++.++|++++++|+.++.. ......+ .+... ..
T Consensus 77 ~l---~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (255)
T 3bf7_A 77 AL---Q---IDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMR 150 (255)
T ss_dssp HH---T---CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCSHHHHHHHHT
T ss_pred Hc---C---CCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccccHHHHHHHHh
Confidence 65 3 2679999999999999999999999999998865321 1000000 00000 00
Q ss_pred cc------------------ccc-HHHHH----hcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcE
Q 011049 394 TL------------------WEA-TNVYI----EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALS 450 (494)
Q Consensus 394 ~~------------------~~~-~~~~~----~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~ 450 (494)
.. |.. ...+. .......+.++++|+|+++|++|..++ +..++.+.+.+ ...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~----~~~ 224 (255)
T 3bf7_A 151 QHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVS--EQYRDDLLAQF----PQA 224 (255)
T ss_dssp TTCCCHHHHHHHHTTEETTEESSCHHHHHHTHHHHHCCCCCCCCCSCEEEECBTTCSTTC--GGGHHHHHHHC----TTE
T ss_pred hhcchhHHHHHHHHhccCCceeecHHHHHhhhhhccccccccccCCCeEEEECCCCCCCC--HHHHHHHHHHC----CCC
Confidence 00 000 00000 000001245788999999999999987 77766665544 347
Q ss_pred EEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 451 RLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 451 ~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
++++++++||.+. .+....+.+.+.+||.+|
T Consensus 225 ~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 255 (255)
T 3bf7_A 225 RAHVIAGAGHWVH-AEKPDAVLRAIRRYLNDH 255 (255)
T ss_dssp EECCBTTCCSCHH-HHCHHHHHHHHHHHHHTC
T ss_pred eEEEeCCCCCccc-cCCHHHHHHHHHHHHhcC
Confidence 9999999999876 356678888999999764
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.1e-14 Score=135.30 Aligned_cols=172 Identities=16% Similarity=0.068 Sum_probs=110.2
Q ss_pred HHHhCCeEEEeCCCCCCCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCc
Q 011049 292 IFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL 368 (494)
Q Consensus 292 ~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~ 368 (494)
.|+ ++|.|+++|.+ |+|.+... ....+...+|+.+.++.+ +.+++.++|||+||.+++.++.++|++
T Consensus 62 ~l~-~~~~vi~~D~~---G~G~S~~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvGhS~GG~ia~~~a~~~p~~ 131 (289)
T 1u2e_A 62 LVE-AGYRVILLDCP---GWGKSDSVVNSGSRSDLNARILKSVVDQL------DIAKIHLLGNSMGGHSSVAFTLKWPER 131 (289)
T ss_dssp HHH-TTCEEEEECCT---TSTTSCCCCCSSCHHHHHHHHHHHHHHHT------TCCCEEEEEETHHHHHHHHHHHHCGGG
T ss_pred HHh-cCCeEEEEcCC---CCCCCCCCCccccCHHHHHHHHHHHHHHh------CCCceEEEEECHhHHHHHHHHHHCHHh
Confidence 444 45999996654 55655432 223344555555554432 236899999999999999999999999
Q ss_pred eeEEEeCCCCCCCCC--CCCC---cc---------c--c----------cccc---------c----ccHHHHH------
Q 011049 369 FCCGIARSGSYNKTL--TPFG---FQ---------T--E----------FRTL---------W----EATNVYI------ 403 (494)
Q Consensus 369 ~~a~v~~~~~~~~~~--~~~~---~~---------~--~----------~~~~---------~----~~~~~~~------ 403 (494)
++++|++++...... .... .. . . .... + ..+..+.
T Consensus 132 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (289)
T 1u2e_A 132 VGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSL 211 (289)
T ss_dssp EEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTTSSCTTSCCHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred hhEEEEECCCccccccccccchhhHHHHHHHHhcchHHHHHHHHHHhhcCcccCCHHHHHHHHHHhhcChhHHHHHHHHH
Confidence 999999887542110 0000 00 0 0 0000 0 0001000
Q ss_pred ------hcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHH
Q 011049 404 ------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDR 477 (494)
Q Consensus 404 ------~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 477 (494)
..+....+.++++|+|+++|++|..+| +..++++.+.+. ..++++++++||.... +....+.+.+.+
T Consensus 212 ~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~----~~~~~~i~~~gH~~~~-e~p~~~~~~i~~ 284 (289)
T 1u2e_A 212 EANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVP--MDAGLRLLSGIA----GSELHIFRDCGHWAQW-EHADAFNQLVLN 284 (289)
T ss_dssp HHCSCCSCCCGGGGGGCCSCEEEEEETTCSSSC--THHHHHHHHHST----TCEEEEESSCCSCHHH-HTHHHHHHHHHH
T ss_pred HhccccccchhhHHhhcCCCeEEEeeCCCCccC--HHHHHHHHhhCC----CcEEEEeCCCCCchhh-cCHHHHHHHHHH
Confidence 011223567789999999999999988 888777777654 3589999999998653 556677788888
Q ss_pred HHH
Q 011049 478 WLQ 480 (494)
Q Consensus 478 fl~ 480 (494)
||.
T Consensus 285 fl~ 287 (289)
T 1u2e_A 285 FLA 287 (289)
T ss_dssp HHT
T ss_pred Hhc
Confidence 875
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.3e-15 Score=141.72 Aligned_cols=211 Identities=9% Similarity=-0.045 Sum_probs=133.0
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 308 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 308 (494)
+...+|.++.+..+-+ .|+||++||.+.+. ..|.. ....| ..+|.|++++.+
T Consensus 12 ~~~~~g~~l~~~~~g~----------~~~vv~lHG~~~~~-----------~~~~~----~~~~l-~~~~~vi~~D~~-- 63 (297)
T 2qvb_A 12 YLEIAGKRMAYIDEGK----------GDAIVFQHGNPTSS-----------YLWRN----IMPHL-EGLGRLVACDLI-- 63 (297)
T ss_dssp EEEETTEEEEEEEESS----------SSEEEEECCTTCCG-----------GGGTT----TGGGG-TTSSEEEEECCT--
T ss_pred EEEECCEEEEEEecCC----------CCeEEEECCCCchH-----------HHHHH----HHHHH-hhcCeEEEEcCC--
Confidence 3345788887766521 47899999975221 22322 12233 345999996665
Q ss_pred CCCCCCCCCc------hhHHHHHHHHHHHHHHHHHcCCCCC-CcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCC
Q 011049 309 IGEGDKLPND------RFVEQLVSSAEAAVEEVVRRGVADP-SRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 381 (494)
Q Consensus 309 ~g~g~~~~~~------~~~~~~~~d~~~~v~~l~~~~~~d~-~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~ 381 (494)
|+|.+.... ...+..++|+.++++.+ +. +++.++|||+||.+++.++.++|++++++|+++|....
T Consensus 64 -G~G~S~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 136 (297)
T 2qvb_A 64 -GMGASDKLSPSGPDRYSYGEQRDFLFALWDAL------DLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTP 136 (297)
T ss_dssp -TSTTSCCCSSCSTTSSCHHHHHHHHHHHHHHT------TCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSC
T ss_pred -CCCCCCCCCCccccCcCHHHHHHHHHHHHHHc------CCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCC
Confidence 455443221 23456677777766654 33 68999999999999999999999999999999886531
Q ss_pred CC---CCCCcc-------cc--------------------ccccc----------------ccH----HHHHhc------
Q 011049 382 TL---TPFGFQ-------TE--------------------FRTLW----------------EAT----NVYIEM------ 405 (494)
Q Consensus 382 ~~---~~~~~~-------~~--------------------~~~~~----------------~~~----~~~~~~------ 405 (494)
.. ...... .. ....+ ... ..+...
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (297)
T 2qvb_A 137 MTWADWPPAVRGVFQGFRSPQGEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEP 216 (297)
T ss_dssp BCGGGSCGGGHHHHHHHTSTTHHHHHHTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBS
T ss_pred ccCCCCChHHHHHHHHHhcccchhhhccccHHHHHHHhccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCc
Confidence 10 000000 00 00000 000 000111
Q ss_pred --------CccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHH
Q 011049 406 --------SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDR 477 (494)
Q Consensus 406 --------sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 477 (494)
+....+.++++|+|+++|++|..+| ...++++.+.+ .. +++++ +++|.+. .+....+.+.+.+
T Consensus 217 ~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~----~~-~~~~~-~~gH~~~-~~~p~~~~~~i~~ 287 (297)
T 2qvb_A 217 AEVVALVNEYRSWLEETDMPKLFINAEPGAIIT--GRIRDYVRSWP----NQ-TEITV-PGVHFVQ-EDSPEEIGAAIAQ 287 (297)
T ss_dssp HHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHTSS----SE-EEEEE-EESSCGG-GTCHHHHHHHHHH
T ss_pred hhhHHHHHHHHhhcccccccEEEEecCCCCcCC--HHHHHHHHHHc----CC-eEEEe-cCccchh-hhCHHHHHHHHHH
Confidence 1123456789999999999999987 77665554433 34 78888 9999876 3667788899999
Q ss_pred HHHHhc
Q 011049 478 WLQKYC 483 (494)
Q Consensus 478 fl~~~l 483 (494)
||+++.
T Consensus 288 fl~~~~ 293 (297)
T 2qvb_A 288 FVRRLR 293 (297)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998764
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=7e-15 Score=135.48 Aligned_cols=200 Identities=10% Similarity=0.037 Sum_probs=125.2
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCc---hhHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~ 331 (494)
.|.||++||.+.+ ...|. .....|+++||.|+++|. +|+|.+.... ...+..++|+.+.
T Consensus 4 ~~~vvllHG~~~~-----------~~~w~----~~~~~L~~~g~rVia~Dl---~G~G~S~~~~~~~~~~~~~a~dl~~~ 65 (273)
T 1xkl_A 4 GKHFVLVHGACHG-----------GWSWY----KLKPLLEAAGHKVTALDL---AASGTDLRKIEELRTLYDYTLPLMEL 65 (273)
T ss_dssp CCEEEEECCTTCC-----------GGGGT----THHHHHHHTTCEEEECCC---TTSTTCCCCGGGCCSHHHHHHHHHHH
T ss_pred CCeEEEECCCCCC-----------cchHH----HHHHHHHhCCCEEEEecC---CCCCCCccCcccccCHHHHHHHHHHH
Confidence 3679999996521 11232 245577789999999554 4666664321 1345566666665
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCC--------------Cccc-c---c-
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF--------------GFQT-E---F- 392 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~--------------~~~~-~---~- 392 (494)
++.+ +. .+++.++||||||.+++.++.++|++++++|.+++......... .+.. . .
T Consensus 66 l~~l---~~--~~~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (273)
T 1xkl_A 66 MESL---SA--DEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYG 140 (273)
T ss_dssp HHTS---CS--SSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECS
T ss_pred HHHh---cc--CCCEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhcc
Confidence 5443 21 26899999999999999999999999999998876421100000 0000 0 0
Q ss_pred ------ccccccHHH---------------HH--hcCccc----------cc---cCCCCCEEEEecCCCCCCCCCHHHH
Q 011049 393 ------RTLWEATNV---------------YI--EMSPIT----------HA---NKIKKPILIIHGEVDDKVGLFPMQA 436 (494)
Q Consensus 393 ------~~~~~~~~~---------------~~--~~sp~~----------~~---~~~~~P~li~~G~~D~~v~~~~~~~ 436 (494)
.......+. +. ...+.. .. ...++|+|+++|++|..+| +..+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p--~~~~ 218 (273)
T 1xkl_A 141 SPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIP--EEFQ 218 (273)
T ss_dssp CTTSCCEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTT--HHHH
T ss_pred CCCCCccccccCHHHHHHHhhccCCHHHHHHHHHhcCCCchhhhhhhcccccchhhhCCCCeEEEEeCCccCCC--HHHH
Confidence 000000000 00 000100 00 1135899999999999987 8887
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 437 ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 437 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
+.+.+.+. ..++++++++||... .+..+.+.+.+.+|+.+...
T Consensus 219 ~~~~~~~p----~~~~~~i~~aGH~~~-~e~P~~~~~~i~~fl~~~~~ 261 (273)
T 1xkl_A 219 RWQIDNIG----VTEAIEIKGADHMAM-LCEPQKLCASLLEIAHKYNM 261 (273)
T ss_dssp HHHHHHHC----CSEEEEETTCCSCHH-HHSHHHHHHHHHHHHHHCC-
T ss_pred HHHHHhCC----CCeEEEeCCCCCCch-hcCHHHHHHHHHHHHHHhcc
Confidence 77777664 258999999999876 46677888999999987654
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=6.7e-15 Score=134.91 Aligned_cols=196 Identities=8% Similarity=-0.029 Sum_probs=123.1
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCc---hhHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~ 331 (494)
.|.||++||.+.+ ...|. .....|+++||.|+++|.+ |+|.+.... ...+..++|+.+.
T Consensus 10 g~~vvllHG~~~~-----------~~~w~----~~~~~L~~~g~~via~Dl~---G~G~S~~~~~~~~~~~~~a~dl~~~ 71 (264)
T 2wfl_A 10 QKHFVLVHGGCLG-----------AWIWY----KLKPLLESAGHKVTAVDLS---AAGINPRRLDEIHTFRDYSEPLMEV 71 (264)
T ss_dssp CCEEEEECCTTCC-----------GGGGT----THHHHHHHTTCEEEEECCT---TSTTCSCCGGGCCSHHHHHHHHHHH
T ss_pred CCeEEEECCCccc-----------cchHH----HHHHHHHhCCCEEEEeecC---CCCCCCCCcccccCHHHHHHHHHHH
Confidence 5789999996521 11232 3455677899999995554 566654321 2345667777666
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC-CCCC-------------ccc----cc-
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL-TPFG-------------FQT----EF- 392 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~-~~~~-------------~~~----~~- 392 (494)
++.+ +. .+++.|+||||||.+++.++.++|++++++|..++...... .... +.. ..
T Consensus 72 l~~l---~~--~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (264)
T 2wfl_A 72 MASI---PP--DEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYG 146 (264)
T ss_dssp HHHS---CT--TCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTTCEEEEES
T ss_pred HHHh---CC--CCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhhhhhhhcc
Confidence 6654 21 26899999999999999999999999999998876421100 0000 000 00
Q ss_pred ---c---cccccHHH---------------HH--hcCcc----------ccc--c-CCCCCEEEEecCCCCCCCCCHHHH
Q 011049 393 ---R---TLWEATNV---------------YI--EMSPI----------THA--N-KIKKPILIIHGEVDDKVGLFPMQA 436 (494)
Q Consensus 393 ---~---~~~~~~~~---------------~~--~~sp~----------~~~--~-~~~~P~li~~G~~D~~v~~~~~~~ 436 (494)
. ......+. +. ...+. ... . ..++|+|+++|++|..+| ...+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~--~~~~ 224 (264)
T 2wfl_A 147 NPENPGMSMILGPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFP--VEFQ 224 (264)
T ss_dssp CTTSCEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHTTSCCCCTTTGGGSCEEEEEETTCSSSC--HHHH
T ss_pred CCCCCcchhhhhHHHHHHHHhcCCCHHHHHHHHhccCCCcccccccccccccChHHhCCCCeEEEEeCCcCCCC--HHHH
Confidence 0 00000000 00 00000 000 1 135899999999999988 8888
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 437 ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 437 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
+.+.+.+. ..++++++++||... .+..+.+.+.+.+|+.
T Consensus 225 ~~~~~~~p----~~~~~~i~~~gH~~~-~e~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 225 KWFVESVG----ADKVKEIKEADHMGM-LSQPREVCKCLLDISD 263 (264)
T ss_dssp HHHHHHHC----CSEEEEETTCCSCHH-HHSHHHHHHHHHHHHC
T ss_pred HHHHHhCC----CceEEEeCCCCCchh-hcCHHHHHHHHHHHhh
Confidence 77777764 358999999999876 3667788888888874
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.65 E-value=2.2e-16 Score=142.91 Aligned_cols=207 Identities=12% Similarity=0.056 Sum_probs=122.0
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCC------------------CCCCC--
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPII------------------GEGDK-- 314 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~------------------g~g~~-- 314 (494)
.|.||++||.+. +...|..........|..+||.|+.++.+... |+|..
T Consensus 5 ~~~vl~lHG~g~-----------~~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~ 73 (243)
T 1ycd_A 5 IPKLLFLHGFLQ-----------NGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRA 73 (243)
T ss_dssp CCEEEEECCTTC-----------CHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEE
T ss_pred CceEEEeCCCCc-----------cHHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcc
Confidence 689999999652 11122211112334556679999997765110 11211
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCC------CceeEEEeCCCCCCCCCCCCCc
Q 011049 315 LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP------HLFCCGIARSGSYNKTLTPFGF 388 (494)
Q Consensus 315 ~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p------~~~~a~v~~~~~~~~~~~~~~~ 388 (494)
+.... ......|+.++++++.+....+..+++|+|||+||.+|+.++.+++ ..+++++..++........ .+
T Consensus 74 w~~~~-~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~-~~ 151 (243)
T 1ycd_A 74 WFYHS-EISHELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP-EH 151 (243)
T ss_dssp SSCCC-SSGGGCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT-TS
T ss_pred cccCC-CCcchhhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc-cc
Confidence 11000 0011334555555555432233468999999999999999998752 2567888777754311000 00
Q ss_pred ccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC---CcEEEEEcCCCCCccCCc
Q 011049 389 QTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG---ALSRLVLLPFEHHVYAAR 465 (494)
Q Consensus 389 ~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g---~~~~~~~~~~~~H~~~~~ 465 (494)
.. ...+. ..+. ..+..+.++++|+|++||++|..|| +.+++++++.++..+ .....+++++++|.+...
T Consensus 152 ~~--~~~~~--~~~~--~~~~~~~~~~~P~l~i~G~~D~~vp--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~ 223 (243)
T 1ycd_A 152 PG--ELRIT--EKFR--DSFAVKPDMKTKMIFIYGASDQAVP--SVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK 223 (243)
T ss_dssp TT--CEEEC--GGGT--TTTCCCTTCCCEEEEEEETTCSSSC--HHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC
T ss_pred cc--ccccc--hhHH--HhccCcccCCCCEEEEEeCCCCccC--HHHHHHHHHHhhhhccccccccEEEecCCCCcCCch
Confidence 00 00010 0111 1222456688999999999999998 999999999998741 112344566779987532
Q ss_pred ccHHHHHHHHHHHHHHhcCC
Q 011049 466 ENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 466 ~~~~~~~~~~~~fl~~~l~~ 485 (494)
..+.+.+.+||+++++.
T Consensus 224 ---~~~~~~i~~fl~~~~~~ 240 (243)
T 1ycd_A 224 ---KDIIRPIVEQITSSLQE 240 (243)
T ss_dssp ---HHHHHHHHHHHHHHHC-
T ss_pred ---HHHHHHHHHHHHHhhhh
Confidence 25888999999998864
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=99.64 E-value=1.3e-14 Score=135.29 Aligned_cols=212 Identities=16% Similarity=0.089 Sum_probs=132.4
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 308 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 308 (494)
+...+|.++.+...- ..|+||++||.+.+ ...|. .....|+++ |.|+++|.+
T Consensus 14 ~~~~~g~~l~~~~~g----------~~~~vv~lHG~~~~-----------~~~~~----~~~~~L~~~-~~vi~~D~~-- 65 (301)
T 3kda_A 14 YREVDGVKLHYVKGG----------QGPLVMLVHGFGQT-----------WYEWH----QLMPELAKR-FTVIAPDLP-- 65 (301)
T ss_dssp EEEETTEEEEEEEEE----------SSSEEEEECCTTCC-----------GGGGT----TTHHHHTTT-SEEEEECCT--
T ss_pred EEeeCCeEEEEEEcC----------CCCEEEEECCCCcc-----------hhHHH----HHHHHHHhc-CeEEEEcCC--
Confidence 344588888877653 14789999997522 22232 234466666 999996654
Q ss_pred CCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCc-EEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC-
Q 011049 309 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSR-IAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT- 384 (494)
Q Consensus 309 ~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~r-i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~- 384 (494)
|+|.+... ....++.++|+.+.++.+ + .++ +.++|||+||.+++.++.++|++++++|++++.......
T Consensus 66 -G~G~S~~~~~~~~~~~~~~~l~~~l~~l---~---~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 138 (301)
T 3kda_A 66 -GLGQSEPPKTGYSGEQVAVYLHKLARQF---S---PDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIY 138 (301)
T ss_dssp -TSTTCCCCSSCSSHHHHHHHHHHHHHHH---C---SSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGG
T ss_pred -CCCCCCCCCCCccHHHHHHHHHHHHHHc---C---CCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCcc
Confidence 55555322 223566677777777765 2 356 999999999999999999999999999999885321000
Q ss_pred ------------CCC---------cccc-----------------c-ccccccH---HHHH-------------------
Q 011049 385 ------------PFG---------FQTE-----------------F-RTLWEAT---NVYI------------------- 403 (494)
Q Consensus 385 ------------~~~---------~~~~-----------------~-~~~~~~~---~~~~------------------- 403 (494)
.+. +... . ...+... +.+.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (301)
T 3kda_A 139 RFPAFTAQGESLVWHFSFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRAL 218 (301)
T ss_dssp GSBSEETTEECSSTHHHHHHCSTTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTH
T ss_pred chhhhcchhhhhhhhHHHhhcCcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhh
Confidence 000 0000 0 0000000 0000
Q ss_pred ------hcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHH
Q 011049 404 ------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDR 477 (494)
Q Consensus 404 ------~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 477 (494)
.......+.++++|+|+++|++| ++ ...... +.+.-.++++++++++||.+. .+..+.+.+.+.+
T Consensus 219 ~~~~~~~~~~~~~l~~i~~P~l~i~G~~D--~~--~~~~~~----~~~~~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~ 289 (301)
T 3kda_A 219 NESVRQNAELAKTRLQMPTMTLAGGGAGG--MG--TFQLEQ----MKAYAEDVEGHVLPGCGHWLP-EECAAPMNRLVID 289 (301)
T ss_dssp HHHHHHHHHHTTSCBCSCEEEEEECSTTS--CT--THHHHH----HHTTBSSEEEEEETTCCSCHH-HHTHHHHHHHHHH
T ss_pred ccchhhcccchhhccccCcceEEEecCCC--CC--hhHHHH----HHhhcccCeEEEcCCCCcCch-hhCHHHHHHHHHH
Confidence 00001122378999999999999 43 444444 444445689999999999876 4667777778888
Q ss_pred HHHHhcC
Q 011049 478 WLQKYCL 484 (494)
Q Consensus 478 fl~~~l~ 484 (494)
|+.+.-+
T Consensus 290 ~l~~~~~ 296 (301)
T 3kda_A 290 FLSRGRH 296 (301)
T ss_dssp HHTTSCC
T ss_pred HHhhCch
Confidence 8876543
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=99.64 E-value=6.7e-15 Score=137.38 Aligned_cols=208 Identities=12% Similarity=0.051 Sum_probs=130.4
Q ss_pred ceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCC
Q 011049 235 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK 314 (494)
Q Consensus 235 ~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~ 314 (494)
.++.+...-|.+ . .|.||++||.+.+ ...|. .....|+++||.|+++|. +|+|.+
T Consensus 33 ~~l~y~~~G~~~-----~--g~~vvllHG~~~~-----------~~~w~----~~~~~L~~~g~rvia~Dl---~G~G~S 87 (297)
T 2xt0_A 33 LRMHYVDEGPRD-----A--EHTFLCLHGEPSW-----------SFLYR----KMLPVFTAAGGRVVAPDL---FGFGRS 87 (297)
T ss_dssp CCEEEEEESCTT-----C--SCEEEEECCTTCC-----------GGGGT----TTHHHHHHTTCEEEEECC---TTSTTS
T ss_pred eEEEEEEccCCC-----C--CCeEEEECCCCCc-----------ceeHH----HHHHHHHhCCcEEEEeCC---CCCCCC
Confidence 788877664321 0 3679999996521 12232 244577889999999555 466766
Q ss_pred CCC----chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC-CCCc-
Q 011049 315 LPN----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT-PFGF- 388 (494)
Q Consensus 315 ~~~----~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~-~~~~- 388 (494)
... ....+..++|+.+.++.+ + -+++.++||||||.+++.+|.++|++++++|++++....... ...+
T Consensus 88 ~~~~~~~~~~~~~~a~dl~~ll~~l---~---~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~ 161 (297)
T 2xt0_A 88 DKPTDDAVYTFGFHRRSLLAFLDAL---Q---LERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFE 161 (297)
T ss_dssp CEESCGGGCCHHHHHHHHHHHHHHH---T---CCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHHH
T ss_pred CCCCCcccCCHHHHHHHHHHHHHHh---C---CCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhHH
Confidence 432 123566677887777765 3 268999999999999999999999999999998874311000 0000
Q ss_pred --cc------------------cc---------ccccccH------HHHHhc--------------Ccccccc-CCCCCE
Q 011049 389 --QT------------------EF---------RTLWEAT------NVYIEM--------------SPITHAN-KIKKPI 418 (494)
Q Consensus 389 --~~------------------~~---------~~~~~~~------~~~~~~--------------sp~~~~~-~~~~P~ 418 (494)
.. .. ...+... ..+... +....+. ++++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~ 241 (297)
T 2xt0_A 162 SWRDFVANSPDLDVGKLMQRAIPGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPT 241 (297)
T ss_dssp HHHHHHHTCTTCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSCE
T ss_pred HHHHHhhcccccchhHHHhccCccCCHHHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCCe
Confidence 00 00 0000000 000000 0012345 889999
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 419 LIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 419 li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
|+++|++|..+| ..+.++.+.+... ....+.++++||... . ..+.+.+.+.+||.
T Consensus 242 Lvi~G~~D~~~~---~~~~~~~~~~p~~--~~~~~~~~~~GH~~~-~-~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 242 FMAVGAQDPVLG---PEVMGMLRQAIRG--CPEPMIVEAGGHFVQ-E-HGEPIARAALAAFG 296 (297)
T ss_dssp EEEEETTCSSSS---HHHHHHHHHHSTT--CCCCEEETTCCSSGG-G-GCHHHHHHHHHHTT
T ss_pred EEEEeCCCcccC---hHHHHHHHhCCCC--eeEEeccCCCCcCcc-c-CHHHHHHHHHHHHh
Confidence 999999999864 5566777666432 233344789999876 3 66788888888874
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=99.64 E-value=2.2e-15 Score=140.61 Aligned_cols=215 Identities=10% Similarity=-0.052 Sum_probs=134.8
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 308 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 308 (494)
+...+|.++.+..+-+ .|+||++||.+.+ ...|... ...|+ ..|.|++++.+
T Consensus 13 ~~~~~g~~l~~~~~g~----------~~~vv~lHG~~~~-----------~~~~~~~----~~~L~-~~~~vi~~D~~-- 64 (302)
T 1mj5_A 13 FIEIKGRRMAYIDEGT----------GDPILFQHGNPTS-----------SYLWRNI----MPHCA-GLGRLIACDLI-- 64 (302)
T ss_dssp EEEETTEEEEEEEESC----------SSEEEEECCTTCC-----------GGGGTTT----GGGGT-TSSEEEEECCT--
T ss_pred EEEECCEEEEEEEcCC----------CCEEEEECCCCCc-----------hhhhHHH----HHHhc-cCCeEEEEcCC--
Confidence 3446888887765421 4789999997522 1223322 22334 44799986665
Q ss_pred CCCCCCCCCc------hhHHHHHHHHHHHHHHHHHcCCCCC-CcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCC
Q 011049 309 IGEGDKLPND------RFVEQLVSSAEAAVEEVVRRGVADP-SRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 381 (494)
Q Consensus 309 ~g~g~~~~~~------~~~~~~~~d~~~~v~~l~~~~~~d~-~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~ 381 (494)
|+|.+.... ....+.++|+.+.++.+ +. +++.++|||+||.+++.++.++|++++++|+++|....
T Consensus 65 -G~G~S~~~~~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 137 (302)
T 1mj5_A 65 -GMGDSDKLDPSGPERYAYAEHRDYLDALWEAL------DLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMP 137 (302)
T ss_dssp -TSTTSCCCSSCSTTSSCHHHHHHHHHHHHHHT------TCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSC
T ss_pred -CCCCCCCCCCCCcccccHHHHHHHHHHHHHHh------CCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCc
Confidence 455543221 23456667766666554 23 68999999999999999999999999999999886531
Q ss_pred CC---CCCCcc-------------------cc--------ccccc----------------ccHHHH----Hh-------
Q 011049 382 TL---TPFGFQ-------------------TE--------FRTLW----------------EATNVY----IE------- 404 (494)
Q Consensus 382 ~~---~~~~~~-------------------~~--------~~~~~----------------~~~~~~----~~------- 404 (494)
.. ...... .. ..... .....+ ..
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (302)
T 1mj5_A 138 IEWADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTP 217 (302)
T ss_dssp BCGGGSCGGGHHHHHHHHSTTHHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBS
T ss_pred hhhhhhhHHHHHHHHHHhccchhhhhcChHHHHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccc
Confidence 10 000000 00 00000 000000 00
Q ss_pred -------cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHH
Q 011049 405 -------MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDR 477 (494)
Q Consensus 405 -------~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 477 (494)
.+....+.++++|+|+++|++|..+| +..++.+.+.+ .. ++.++ +++|.+. .+..+.+.+.+.+
T Consensus 218 ~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~----~~-~~~~~-~~gH~~~-~e~p~~~~~~i~~ 288 (302)
T 1mj5_A 218 ADVVAIARDYAGWLSESPIPKLFINAEPGALTT--GRMRDFCRTWP----NQ-TEITV-AGAHFIQ-EDSPDEIGAAIAA 288 (302)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEEEEEEEECSSSS--HHHHHHHTTCS----SE-EEEEE-EESSCGG-GTCHHHHHHHHHH
T ss_pred hhhHHHHHHHHhhhhccCCCeEEEEeCCCCCCC--hHHHHHHHHhc----CC-ceEEe-cCcCccc-ccCHHHHHHHHHH
Confidence 01123456789999999999999987 76655554433 34 88888 9999876 3667788999999
Q ss_pred HHHHhcCCCC
Q 011049 478 WLQKYCLSNT 487 (494)
Q Consensus 478 fl~~~l~~~~ 487 (494)
|+.+...+..
T Consensus 289 fl~~~~~~~~ 298 (302)
T 1mj5_A 289 FVRRLRPAHH 298 (302)
T ss_dssp HHHHHSCCCC
T ss_pred HHHhhccccc
Confidence 9998876543
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.64 E-value=4.7e-15 Score=136.27 Aligned_cols=194 Identities=14% Similarity=0.118 Sum_probs=122.6
Q ss_pred cEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC---chhHHHHHHHHHHHH
Q 011049 256 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAV 332 (494)
Q Consensus 256 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v 332 (494)
|.||++||.+.+ ...|. .....|++ .|.|+++|.+ |+|.+... ....+..++|+.+.+
T Consensus 17 ~~vvllHG~~~~-----------~~~~~----~~~~~L~~-~~~vi~~Dl~---G~G~S~~~~~~~~~~~~~~~dl~~~l 77 (269)
T 2xmz_A 17 QVLVFLHGFLSD-----------SRTYH----NHIEKFTD-NYHVITIDLP---GHGEDQSSMDETWNFDYITTLLDRIL 77 (269)
T ss_dssp EEEEEECCTTCC-----------GGGGT----TTHHHHHT-TSEEEEECCT---TSTTCCCCTTSCCCHHHHHHHHHHHH
T ss_pred CeEEEEcCCCCc-----------HHHHH----HHHHHHhh-cCeEEEecCC---CCCCCCCCCCCccCHHHHHHHHHHHH
Confidence 469999997522 12232 23345555 5999995554 56665433 123456677777666
Q ss_pred HHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCC------------------Cccc----
Q 011049 333 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF------------------GFQT---- 390 (494)
Q Consensus 333 ~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~------------------~~~~---- 390 (494)
+.+ +.+++.++||||||.+++.++.++|++++++|+.++......... .+..
T Consensus 78 ~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (269)
T 2xmz_A 78 DKY------KDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVND 151 (269)
T ss_dssp GGG------TTSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHc------CCCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccHHHHHHH
Confidence 653 236899999999999999999999999999999886533110000 0000
Q ss_pred cc-ccccc-----cH---------------H----HHHh------cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHH
Q 011049 391 EF-RTLWE-----AT---------------N----VYIE------MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERF 439 (494)
Q Consensus 391 ~~-~~~~~-----~~---------------~----~~~~------~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~ 439 (494)
.. ...+. .. . .+.. .+....+.++++|+|+++|++|..+| .... ++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~-~~ 228 (269)
T 2xmz_A 152 WEKLPLFQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFV--QIAK-KM 228 (269)
T ss_dssp HTTSGGGGGGGGSCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHH--HHHH-HH
T ss_pred HHhCccccccccCCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccC--HHHH-HH
Confidence 00 00000 00 0 0000 01123466789999999999999875 5443 34
Q ss_pred HHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 440 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 440 ~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
.+.+ ..+++++++++||.... +..+.+.+.+.+||.+.
T Consensus 229 ~~~~----~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 229 ANLI----PNSKCKLISATGHTIHV-EDSDEFDTMILGFLKEE 266 (269)
T ss_dssp HHHS----TTEEEEEETTCCSCHHH-HSHHHHHHHHHHHHHHH
T ss_pred HhhC----CCcEEEEeCCCCCChhh-cCHHHHHHHHHHHHHHh
Confidence 3332 45899999999998763 56778888999999865
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.4e-15 Score=150.46 Aligned_cols=203 Identities=16% Similarity=0.116 Sum_probs=128.7
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCc---cCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCC-------C-------
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNE---FSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP-------N------- 317 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~-------~------- 317 (494)
.|+||++||.+.+. .. |..... ....|+++||.|+++|.+|. |+|.+.. .
T Consensus 109 ~p~vvllHG~~~~~-----------~~~~~w~~~~~-~~~~L~~~~~~Vi~~D~~G~-~~G~S~~~~~~~~~~~~~~~~~ 175 (444)
T 2vat_A 109 DNCVIVCHTLTSSA-----------HVTSWWPTLFG-QGRAFDTSRYFIICLNYLGS-PFGSAGPCSPDPDAEGQRPYGA 175 (444)
T ss_dssp CCEEEEECCTTCCS-----------CGGGTCGGGBS-TTSSBCTTTCEEEEECCTTC-SSSSSSTTSBCTTTC--CBCGG
T ss_pred CCeEEEECCCCccc-----------chhhHHHHhcC-ccchhhccCCEEEEecCCCC-CCCCCCCCCCCccccccccccc
Confidence 58899999976322 12 211110 00124578999999887663 2444321 0
Q ss_pred ---chhHHHHHHHHHHHHHHHHHcCCCCCCc-EEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC---------
Q 011049 318 ---DRFVEQLVSSAEAAVEEVVRRGVADPSR-IAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT--------- 384 (494)
Q Consensus 318 ---~~~~~~~~~d~~~~v~~l~~~~~~d~~r-i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~--------- 384 (494)
....++.++|+.++++.+ + .++ +.++||||||.+++.++.++|++++++|++++.......
T Consensus 176 ~f~~~t~~~~a~dl~~ll~~l---~---~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~ 249 (444)
T 2vat_A 176 KFPRTTIRDDVRIHRQVLDRL---G---VRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQR 249 (444)
T ss_dssp GCCCCCHHHHHHHHHHHHHHH---T---CCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHhc---C---CccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccchhHHHHHH
Confidence 113456677777776665 2 357 999999999999999999999999999998876432100
Q ss_pred -------CCC----------------------------------cccccc----c-------------------cc----
Q 011049 385 -------PFG----------------------------------FQTEFR----T-------------------LW---- 396 (494)
Q Consensus 385 -------~~~----------------------------------~~~~~~----~-------------------~~---- 396 (494)
.+. +..... . .|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (444)
T 2vat_A 250 QCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQP 329 (444)
T ss_dssp HHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------C
T ss_pred HHHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccccccccccccccccCc
Confidence 000 000000 0 00
Q ss_pred -ccHHHH------------------------Hhc--------CccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHH
Q 011049 397 -EATNVY------------------------IEM--------SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDAL 443 (494)
Q Consensus 397 -~~~~~~------------------------~~~--------sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l 443 (494)
...+.| ... +....+.++++|+|+++|++|..+| ...++++.+.+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p--~~~~~~l~~~~ 407 (444)
T 2vat_A 330 IEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYS--FDEHVEMGRSI 407 (444)
T ss_dssp GGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSC--HHHHHHHHHHS
T ss_pred hhhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCC--HHHHHHHHHHC
Confidence 000000 000 1334467889999999999999998 88887777766
Q ss_pred HhCCCcEEEEEcC-CCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 444 KGHGALSRLVLLP-FEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 444 ~~~g~~~~~~~~~-~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
. .+++++++ ++||.... +..+.+.+.+.+||++++
T Consensus 408 p----~~~~~~i~~~~GH~~~~-e~p~~~~~~i~~fL~~~l 443 (444)
T 2vat_A 408 P----NSRLCVVDTNEGHDFFV-MEADKVNDAVRGFLDQSL 443 (444)
T ss_dssp T----TEEEEECCCSCGGGHHH-HTHHHHHHHHHHHHTC--
T ss_pred C----CcEEEEeCCCCCcchHH-hCHHHHHHHHHHHHHHhc
Confidence 4 47999999 89998763 557788888999997665
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.4e-14 Score=134.39 Aligned_cols=217 Identities=19% Similarity=0.211 Sum_probs=131.4
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeC
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 303 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 303 (494)
.+...+.+.+|.++.+..+-+++ +.|.||++||.+.+ ...|. .....|+ .||.|+++
T Consensus 5 ~~~~~~~~~~g~~l~~~~~g~~~-------~~~~vvllHG~~~~-----------~~~~~----~~~~~L~-~~~~vi~~ 61 (285)
T 3bwx_A 5 YEDRYWTSSDGLRLHFRAYEGDI-------SRPPVLCLPGLTRN-----------ARDFE----DLATRLA-GDWRVLCP 61 (285)
T ss_dssp SEEEEEECTTSCEEEEEEECBCT-------TSCCEEEECCTTCC-----------GGGGH----HHHHHHB-BTBCEEEE
T ss_pred cccCeeecCCCceEEEEEcCCCC-------CCCcEEEECCCCcc-----------hhhHH----HHHHHhh-cCCEEEee
Confidence 34566777899999888875542 13678999996521 11221 2333444 49999996
Q ss_pred CCCCCCCCCCCCCC----chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCC--
Q 011049 304 PSIPIIGEGDKLPN----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG-- 377 (494)
Q Consensus 304 ~~~~~~g~g~~~~~----~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~-- 377 (494)
|.+ |+|.+... ....+..++|+.+.++.+ + .+++.++|||+||.+++.+|.++|++++++|+..+
T Consensus 62 Dl~---G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l---~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~ 132 (285)
T 3bwx_A 62 EMR---GRGDSDYAKDPMTYQPMQYLQDLEALLAQE---G---IERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGP 132 (285)
T ss_dssp CCT---TBTTSCCCSSGGGCSHHHHHHHHHHHHHHH---T---CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCS
T ss_pred cCC---CCCCCCCCCCccccCHHHHHHHHHHHHHhc---C---CCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCc
Confidence 654 56655432 112456677887777765 3 26799999999999999999999999999998642
Q ss_pred CCCCC-----------CCCC-Cc---------------ccccccccccH-H-HHHh---------cCc-----c------
Q 011049 378 SYNKT-----------LTPF-GF---------------QTEFRTLWEAT-N-VYIE---------MSP-----I------ 408 (494)
Q Consensus 378 ~~~~~-----------~~~~-~~---------------~~~~~~~~~~~-~-~~~~---------~sp-----~------ 408 (494)
..... .... .+ .......|... . .+.. .++ +
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (285)
T 3bwx_A 133 EVSPEGLERIRGYVGQGRNFETWMHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGA 212 (285)
T ss_dssp SCCHHHHHHHHHHTTCCCEESSHHHHHHHHHHHHTTTSTTCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTC
T ss_pred ccCcchhHHHHHHhcCCcccccHHHHHHHHHHhhhhcccccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhc
Confidence 11100 0000 00 00000000000 0 0000 000 0
Q ss_pred -------ccccCC-CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 409 -------THANKI-KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 409 -------~~~~~~-~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
..+.++ ++|+|+++|++|..++ +...++ +.+. ..+++++++++||.... +..+. +..+.+||.
T Consensus 213 ~~~~~~~~~~~~~~~~P~lii~G~~D~~~~--~~~~~~----~~~~-~~~~~~~i~~~gH~~~~-e~p~~-~~~i~~fl~ 283 (285)
T 3bwx_A 213 TPQVDMWPLFDALATRPLLVLRGETSDILS--AQTAAK----MASR-PGVELVTLPRIGHAPTL-DEPES-IAAIGRLLE 283 (285)
T ss_dssp CCSSCCHHHHHHHTTSCEEEEEETTCSSSC--HHHHHH----HHTS-TTEEEEEETTCCSCCCS-CSHHH-HHHHHHHHT
T ss_pred cccchhhHHHHHccCCCeEEEEeCCCCccC--HHHHHH----HHhC-CCcEEEEeCCCCccchh-hCchH-HHHHHHHHH
Confidence 011223 7999999999999987 665544 4444 56899999999998764 44444 467888885
Q ss_pred H
Q 011049 481 K 481 (494)
Q Consensus 481 ~ 481 (494)
+
T Consensus 284 ~ 284 (285)
T 3bwx_A 284 R 284 (285)
T ss_dssp T
T ss_pred h
Confidence 3
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=3.2e-15 Score=136.91 Aligned_cols=199 Identities=17% Similarity=0.135 Sum_probs=119.6
Q ss_pred CCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC--chhHHHHHHHHHHH
Q 011049 254 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAA 331 (494)
Q Consensus 254 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~ 331 (494)
+.|+||++||.+. +...|. .....| ..+|.|+.++.+ |+|.+... .....+.++|+.+.
T Consensus 19 ~~~~vv~~HG~~~-----------~~~~~~----~~~~~l-~~~~~v~~~d~~---G~G~s~~~~~~~~~~~~~~~~~~~ 79 (267)
T 3fla_A 19 ARARLVCLPHAGG-----------SASFFF----PLAKAL-APAVEVLAVQYP---GRQDRRHEPPVDSIGGLTNRLLEV 79 (267)
T ss_dssp CSEEEEEECCTTC-----------CGGGGH----HHHHHH-TTTEEEEEECCT---TSGGGTTSCCCCSHHHHHHHHHHH
T ss_pred CCceEEEeCCCCC-----------CchhHH----HHHHHh-ccCcEEEEecCC---CCCCCCCCCCCcCHHHHHHHHHHH
Confidence 3799999999752 111221 233344 455999996665 45544221 22345556666655
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCc----eeEEEeCCCCCCCCCCCCCcccc--------cccc----
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL----FCCGIARSGSYNKTLTPFGFQTE--------FRTL---- 395 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~----~~a~v~~~~~~~~~~~~~~~~~~--------~~~~---- 395 (494)
++.+ +.+++.++|||+||.+++.++.++|++ +++++..++.............. ....
T Consensus 80 l~~~------~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (267)
T 3fla_A 80 LRPF------GDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGSD 153 (267)
T ss_dssp TGGG------TTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHH
T ss_pred HHhc------CCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCcc
Confidence 5543 347899999999999999999999986 78888877653211110000000 0000
Q ss_pred ---cccH--------------HHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCC
Q 011049 396 ---WEAT--------------NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFE 458 (494)
Q Consensus 396 ---~~~~--------------~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 458 (494)
...+ .......+... .++++|+|+++|++|..+| ......+.+.+. .+++++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~g- 226 (267)
T 3fla_A 154 AAMLADPELLAMVLPAIRSDYRAVETYRHEPG-RRVDCPVTVFTGDHDPRVS--VGEARAWEEHTT---GPADLRVLPG- 226 (267)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHCCCCTT-CCBSSCEEEEEETTCTTCC--HHHHHGGGGGBS---SCEEEEEESS-
T ss_pred hhhccCHHHHHHHHHHHHHHHHhhhccccccc-CcCCCCEEEEecCCCCCCC--HHHHHHHHHhcC---CCceEEEecC-
Confidence 0000 00111111111 5678999999999999988 777666555443 2489999999
Q ss_pred CCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 459 HHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 459 ~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
+|.+.. ++...+.+.+.+||++....
T Consensus 227 gH~~~~-~~~~~~~~~i~~fl~~~~~~ 252 (267)
T 3fla_A 227 GHFFLV-DQAAPMIATMTEKLAGPALT 252 (267)
T ss_dssp STTHHH-HTHHHHHHHHHHHTC-----
T ss_pred Cceeec-cCHHHHHHHHHHHhcccccc
Confidence 998663 56677888888888876553
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=99.63 E-value=7.9e-15 Score=137.80 Aligned_cols=209 Identities=13% Similarity=0.032 Sum_probs=132.3
Q ss_pred ceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCC
Q 011049 235 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK 314 (494)
Q Consensus 235 ~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~ 314 (494)
.++++...-|.+ . .|.||++||.+.+ ...|. .....|+++||.|+++|. +|+|.+
T Consensus 34 ~~l~y~~~G~~~-----~--g~~vvllHG~~~~-----------~~~w~----~~~~~L~~~g~rvia~Dl---~G~G~S 88 (310)
T 1b6g_A 34 LRAHYLDEGNSD-----A--EDVFLCLHGEPTW-----------SYLYR----KMIPVFAESGARVIAPDF---FGFGKS 88 (310)
T ss_dssp CEEEEEEEECTT-----C--SCEEEECCCTTCC-----------GGGGT----TTHHHHHHTTCEEEEECC---TTSTTS
T ss_pred eEEEEEEeCCCC-----C--CCEEEEECCCCCc-----------hhhHH----HHHHHHHhCCCeEEEeCC---CCCCCC
Confidence 788877664421 0 3679999997522 12232 245577889999999555 467766
Q ss_pred CCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCC--CC------
Q 011049 315 LPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN--KT------ 382 (494)
Q Consensus 315 ~~~~----~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~--~~------ 382 (494)
.... ...+..++|+.+.++.| + -+++.++||||||.+++.+|.++|++++++|++++... ..
T Consensus 89 ~~~~~~~~y~~~~~a~dl~~ll~~l---~---~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~ 162 (310)
T 1b6g_A 89 DKPVDEEDYTFEFHRNFLLALIERL---D---LRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFS 162 (310)
T ss_dssp CEESCGGGCCHHHHHHHHHHHHHHH---T---CCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHH
T ss_pred CCCCCcCCcCHHHHHHHHHHHHHHc---C---CCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchh
Confidence 4321 23566778888877766 3 26899999999999999999999999999999876431 10
Q ss_pred ----CCCCCc---cc--c-c-----------c-cccc--cHHHHH----------------h--cC-----------ccc
Q 011049 383 ----LTPFGF---QT--E-F-----------R-TLWE--ATNVYI----------------E--MS-----------PIT 409 (494)
Q Consensus 383 ----~~~~~~---~~--~-~-----------~-~~~~--~~~~~~----------------~--~s-----------p~~ 409 (494)
.....+ .. . . . .... ..+.|. . .. ...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (310)
T 1b6g_A 163 AFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAIS 242 (310)
T ss_dssp HTTTSSTTTHHHHHHHHHSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHH
T ss_pred hhhhccchHHHHHHHHhccCchhhhhhHHhhcCCCCCHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHhh
Confidence 000000 00 0 0 0 0000 000010 0 00 012
Q ss_pred ccc-CCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 410 HAN-KIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 410 ~~~-~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
.+. ++++|+|+++|++|..+| ..++.+.+.+... ....++++++||.... ..+.+.+.+.+||.+
T Consensus 243 ~l~~~i~~P~Lvi~G~~D~~~~---~~~~~~~~~ip~~--~~~~i~~~~~GH~~~~--~p~~~~~~i~~Fl~~ 308 (310)
T 1b6g_A 243 FWQNDWNGQTFMAIGMKDKLLG---PDVMYPMKALING--CPEPLEIADAGHFVQE--FGEQVAREALKHFAE 308 (310)
T ss_dssp HHHHTCCSEEEEEEETTCSSSS---HHHHHHHHHHSTT--CCCCEEETTCCSCGGG--GHHHHHHHHHHHHHH
T ss_pred hhhccccCceEEEeccCcchhh---hHHHHHHHhcccc--cceeeecCCcccchhh--ChHHHHHHHHHHHhc
Confidence 345 899999999999999863 5566676666432 2233344999998774 777888999999975
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.62 E-value=4.7e-15 Score=140.73 Aligned_cols=212 Identities=11% Similarity=0.059 Sum_probs=127.3
Q ss_pred ceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCC-CCCCCCC
Q 011049 235 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI-PIIGEGD 313 (494)
Q Consensus 235 ~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~-~~~g~g~ 313 (494)
..+.+..+-|.+ . ..|+||++||.+.+ ...|. +.......| ++||.|+.++.+ +..|+|.
T Consensus 24 ~~~~y~~~g~~~---~---~~~~vvllHG~~~~-----------~~~~~-~~~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~ 84 (335)
T 2q0x_A 24 PYCKIPVFMMNM---D---ARRCVLWVGGQTES-----------LLSFD-YFTNLAEEL-QGDWAFVQVEVPSGKIGSGP 84 (335)
T ss_dssp TTEEEEEEEECT---T---SSSEEEEECCTTCC-----------TTCST-THHHHHHHH-TTTCEEEEECCGGGBTTSCS
T ss_pred CceeEEEeccCC---C---CCcEEEEECCCCcc-----------ccchh-HHHHHHHHH-HCCcEEEEEeccCCCCCCCC
Confidence 566666565321 1 15889999995411 11111 111233344 789999986532 3467776
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHH--hCCCceeEEEeCCCCCCCCCCCCCc---
Q 011049 314 KLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA--HAPHLFCCGIARSGSYNKTLTPFGF--- 388 (494)
Q Consensus 314 ~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~--~~p~~~~a~v~~~~~~~~~~~~~~~--- 388 (494)
+. ......|+.++++++.+. .+.+++.|+||||||.+++.++. .+|++++++|+.+|..+........
T Consensus 85 S~-----~~~~~~d~~~~~~~l~~~--l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~~~~~~~~~~ 157 (335)
T 2q0x_A 85 QD-----HAHDAEDVDDLIGILLRD--HCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPENPLFTPEGC 157 (335)
T ss_dssp CC-----HHHHHHHHHHHHHHHHHH--SCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTTSTTTSHHHH
T ss_pred cc-----ccCcHHHHHHHHHHHHHH--cCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccchhcccCHHHH
Confidence 53 234567888888888774 34578999999999999999998 4799999999988764322000000
Q ss_pred cc----------c-----c--cccc-c---cHHHHH-------------------hcCccccccCCCCCEEEEecCCCCC
Q 011049 389 QT----------E-----F--RTLW-E---ATNVYI-------------------EMSPITHANKIKKPILIIHGEVDDK 428 (494)
Q Consensus 389 ~~----------~-----~--~~~~-~---~~~~~~-------------------~~sp~~~~~~~~~P~li~~G~~D~~ 428 (494)
.. . . ...+ . ....+. ..+....+.++++|+|+++|++|..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLvi~G~~D~~ 237 (335)
T 2q0x_A 158 AARKEHVEKLMAEGRGEDSLAMLKHYDIPITPARLAGGGFPTLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQY 237 (335)
T ss_dssp HHHHHHHHHHHHHTCTTCGGGGTTTCSSCCCHHHHHTCSCSSHHHHTHHHHHTTCHHHHHHTGGGCCSCEEEEEECCTTC
T ss_pred HHHHHHHHHHhhccCccccccchhhccCccCHHHHhhccCCCchhhhhhhhhhhhhhHHHHHHhcCCCCeEEEEecCCCC
Confidence 00 0 0 0000 0 000000 0012234678899999999999999
Q ss_pred CCCCHHH-HHHHHHHHHhCCCcEE--------E-----EEcCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 429 VGLFPMQ-AERFFDALKGHGALSR--------L-----VLLPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 429 v~~~~~~-~~~~~~~l~~~g~~~~--------~-----~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
+| +.. ...+.+.+.+.-...+ + .+++++|| +..+.+.+||.+..
T Consensus 238 vp--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~agH---------e~~~~i~~FL~~~~ 295 (335)
T 2q0x_A 238 KP--SDEEVGTVLEGVRDHTGCNRVTVSYFNDTCDELRRVLKAAES---------EHVAAILQFLADED 295 (335)
T ss_dssp CC--CHHHHHHHHHHHHHHSSSSCEEEEECCCEECTTSCEEECCHH---------HHHHHHHHHHHHHH
T ss_pred CC--hhhhHHHHHHHHHHhcCccccccccccchhhhhhcccCCCCC---------HHHHHHHHHHHhhh
Confidence 87 553 2334444444322233 5 78999999 23778889997653
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.6e-14 Score=136.18 Aligned_cols=214 Identities=15% Similarity=0.085 Sum_probs=133.9
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
.+|.++.+...-+ ++.|.||++||.+.+ ...|. .....|+ ..|.|+++|.+ |+
T Consensus 14 ~~g~~l~y~~~G~--------g~~~pvvllHG~~~~-----------~~~w~----~~~~~L~-~~~~via~Dl~---G~ 66 (316)
T 3afi_E 14 VLGSSMAYRETGA--------QDAPVVLFLHGNPTS-----------SHIWR----NILPLVS-PVAHCIAPDLI---GF 66 (316)
T ss_dssp ETTEEEEEEEESC--------TTSCEEEEECCTTCC-----------GGGGT----TTHHHHT-TTSEEEEECCT---TS
T ss_pred eCCEEEEEEEeCC--------CCCCeEEEECCCCCc-----------hHHHH----HHHHHHh-hCCEEEEECCC---CC
Confidence 4677777665421 224589999997532 12233 2333444 45999995554 56
Q ss_pred CCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCC---CCCC-
Q 011049 312 GDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK---TLTP- 385 (494)
Q Consensus 312 g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~---~~~~- 385 (494)
|.+... ....+..++|+.+.++.+ + -+++.|+|||+||.+++.+|.++|++++++|++++.... ....
T Consensus 67 G~S~~~~~~~~~~~~a~dl~~ll~~l---~---~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~ 140 (316)
T 3afi_E 67 GQSGKPDIAYRFFDHVRYLDAFIEQR---G---VTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHH 140 (316)
T ss_dssp TTSCCCSSCCCHHHHHHHHHHHHHHT---T---CCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHc---C---CCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccc
Confidence 665432 223456677777766654 3 268999999999999999999999999999988763210 0000
Q ss_pred ----------------------CC-----------ccccc-c---ccccc---HHHHHh-----------------cCc-
Q 011049 386 ----------------------FG-----------FQTEF-R---TLWEA---TNVYIE-----------------MSP- 407 (494)
Q Consensus 386 ----------------------~~-----------~~~~~-~---~~~~~---~~~~~~-----------------~sp- 407 (494)
.. +.... . ..+.. .+.|.. ...
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (316)
T 3afi_E 141 TEVAEEQDHAEAARAVFRKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIA 220 (316)
T ss_dssp CCCGGGHHHHHHHHHHHHHHTSTTHHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBT
T ss_pred hhhccccccchhHHHHHHHhcCCchhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhcccc
Confidence 00 00000 0 00000 001110 000
Q ss_pred -------------cccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHH
Q 011049 408 -------------ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWE 474 (494)
Q Consensus 408 -------------~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~ 474 (494)
...+.++++|+|+++|++|..+| ...++.+.+.+. ..++.+++++||... .+..+.+.+.
T Consensus 221 ~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~--~~~~~~~~~~~p----~~~~~~i~~~GH~~~-~e~p~~~~~~ 293 (316)
T 3afi_E 221 GEPADVYEALQSAHAALAASSYPKLLFTGEPGALVS--PEFAERFAASLT----RCALIRLGAGLHYLQ-EDHADAIGRS 293 (316)
T ss_dssp TBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHHHSS----SEEEEEEEEECSCHH-HHHHHHHHHH
T ss_pred ccchhhhhHHHHHHHhhhccCCCeEEEecCCCCccC--HHHHHHHHHhCC----CCeEEEcCCCCCCch-hhCHHHHHHH
Confidence 01123578999999999999987 777766666553 478999999999876 3667788899
Q ss_pred HHHHHHHhcCC
Q 011049 475 TDRWLQKYCLS 485 (494)
Q Consensus 475 ~~~fl~~~l~~ 485 (494)
+.+||.+....
T Consensus 294 i~~fl~~~~~~ 304 (316)
T 3afi_E 294 VAGWIAGIEAV 304 (316)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHhhcCCC
Confidence 99999876543
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=99.62 E-value=9e-15 Score=133.46 Aligned_cols=197 Identities=9% Similarity=-0.025 Sum_probs=123.7
Q ss_pred cEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCc---hhHHHHHHHHHHHH
Q 011049 256 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAAV 332 (494)
Q Consensus 256 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~v 332 (494)
|.||++||.+.+ ...|. .....|+++||.|+++|. +|+|.+.... ...+..++|+.+.+
T Consensus 4 ~~vvllHG~~~~-----------~~~w~----~~~~~L~~~g~~via~Dl---~G~G~S~~~~~~~~~~~~~a~dl~~~l 65 (257)
T 3c6x_A 4 AHFVLIHTICHG-----------AWIWH----KLKPLLEALGHKVTALDL---AASGVDPRQIEEIGSFDEYSEPLLTFL 65 (257)
T ss_dssp CEEEEECCTTCC-----------GGGGT----THHHHHHHTTCEEEEECC---TTSTTCSCCGGGCCSHHHHTHHHHHHH
T ss_pred CcEEEEcCCccC-----------cCCHH----HHHHHHHhCCCEEEEeCC---CCCCCCCCCcccccCHHHHHHHHHHHH
Confidence 679999996521 11232 345577789999999555 4566664321 23456666766665
Q ss_pred HHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC-CCC-----------Cc-cccc-------
Q 011049 333 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL-TPF-----------GF-QTEF------- 392 (494)
Q Consensus 333 ~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~-~~~-----------~~-~~~~------- 392 (494)
+.+ + ..+++.++||||||.+++.++.++|++++++|..++...... ... .+ ....
T Consensus 66 ~~l---~--~~~~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (257)
T 3c6x_A 66 EAL---P--PGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDG 140 (257)
T ss_dssp HTS---C--TTCCEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETT
T ss_pred Hhc---c--ccCCeEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhhhccCCC
Confidence 543 2 125899999999999999999999999999998776421000 000 00 0000
Q ss_pred ---ccccccHH----------------HHH-hcCccc----------cc--cC-CCCCEEEEecCCCCCCCCCHHHHHHH
Q 011049 393 ---RTLWEATN----------------VYI-EMSPIT----------HA--NK-IKKPILIIHGEVDDKVGLFPMQAERF 439 (494)
Q Consensus 393 ---~~~~~~~~----------------~~~-~~sp~~----------~~--~~-~~~P~li~~G~~D~~v~~~~~~~~~~ 439 (494)
......++ ... ...+.. .. .. .++|+|+++|++|..+| +..++.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p--~~~~~~~ 218 (257)
T 3c6x_A 141 KEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFL--PEFQLWQ 218 (257)
T ss_dssp EEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHSCCCCTTTGGGSCEEEEECTTCSSSC--HHHHHHH
T ss_pred CccccccccHHHHHHHHhcCCCHHHHHHHHHhcCCCccchhhhccccccChhhcCcccEEEEEeCCCcccC--HHHHHHH
Confidence 00000000 000 001100 00 11 25899999999999988 8877777
Q ss_pred HHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 440 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 440 ~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
.+.+. ..++++++++||... .+..+.+.+.+.+|++++
T Consensus 219 ~~~~~----~~~~~~i~~~gH~~~-~e~P~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 219 IENYK----PDKVYKVEGGDHKLQ-LTKTKEIAEILQEVADTY 256 (257)
T ss_dssp HHHSC----CSEEEECCSCCSCHH-HHSHHHHHHHHHHHHHHC
T ss_pred HHHCC----CCeEEEeCCCCCCcc-cCCHHHHHHHHHHHHHhc
Confidence 76653 358999999999876 467778888999998754
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.61 E-value=4.6e-15 Score=135.63 Aligned_cols=211 Identities=15% Similarity=0.093 Sum_probs=127.3
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
.+|.++.+...-+++ .|+||++||.+.+ ...|. .....| +++|.|+++|.+ |+
T Consensus 6 ~~g~~l~~~~~g~~~--------~~~vv~lHG~~~~-----------~~~~~----~~~~~L-~~~~~v~~~D~~---G~ 58 (264)
T 3ibt_A 6 VNGTLMTYSESGDPH--------APTLFLLSGWCQD-----------HRLFK----NLAPLL-ARDFHVICPDWR---GH 58 (264)
T ss_dssp ETTEECCEEEESCSS--------SCEEEEECCTTCC-----------GGGGT----THHHHH-TTTSEEEEECCT---TC
T ss_pred eCCeEEEEEEeCCCC--------CCeEEEEcCCCCc-----------HhHHH----HHHHHH-HhcCcEEEEccc---cC
Confidence 367777766654422 5789999997522 12232 233344 556999996664 55
Q ss_pred CCCCC--CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC-CCceeEEEeCCCCCCCCC-----
Q 011049 312 GDKLP--NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYNKTL----- 383 (494)
Q Consensus 312 g~~~~--~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~-p~~~~a~v~~~~~~~~~~----- 383 (494)
|.+.. .....++.++|+.+.++.+ +.+++.++|||+||.+++.++.++ |++++++|++++......
T Consensus 59 G~S~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~ 132 (264)
T 3ibt_A 59 DAKQTDSGDFDSQTLAQDLLAFIDAK------GIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQ 132 (264)
T ss_dssp STTCCCCSCCCHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCSSCCHHHHHH
T ss_pred CCCCCCccccCHHHHHHHHHHHHHhc------CCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCCCcChhhcch
Confidence 55542 2223456677777666654 336899999999999999999999 999999999987651000
Q ss_pred -----CCCCcccc-----------cc-----------cccccHHHHH------------hcCccccccCCCCCEEEEecC
Q 011049 384 -----TPFGFQTE-----------FR-----------TLWEATNVYI------------EMSPITHANKIKKPILIIHGE 424 (494)
Q Consensus 384 -----~~~~~~~~-----------~~-----------~~~~~~~~~~------------~~sp~~~~~~~~~P~li~~G~ 424 (494)
....+... .. ........+. ..++...+.++++|+|++||.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~ 212 (264)
T 3ibt_A 133 LAEGQHPTEYVAGRQSFFDEWAETTDNADVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIY 212 (264)
T ss_dssp HHHTTCTTTHHHHHHHHHHHHHTTCCCHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEE
T ss_pred hhcccChhhHHHHHHHHHHHhcccCCcHHHHHHHHHhhhhccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEec
Confidence 00000000 00 0000000000 112235567889999999875
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 425 VDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 425 ~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
.|...+ . ..+..+.+.+.-...++++++++||... .+....+.+.+.+||+
T Consensus 213 ~~~~~~--~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 213 SQPLSQ--D--YRQLQLEFAAGHSWFHPRHIPGRTHFPS-LENPVAVAQAIREFLQ 263 (264)
T ss_dssp CCSCCH--H--HHHHHHHHHHHCTTEEEEECCCSSSCHH-HHCHHHHHHHHHHHTC
T ss_pred CCccch--h--hHHHHHHHHHhCCCceEEEcCCCCCcch-hhCHHHHHHHHHHHHh
Confidence 554332 1 1123334444344579999999999765 3566777888888874
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.61 E-value=6.4e-15 Score=137.84 Aligned_cols=196 Identities=15% Similarity=0.062 Sum_probs=121.9
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhC--CeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR--RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAV 332 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v 332 (494)
.|.||++||.+. +...| ......|+++ ||.|+.+|.+ |+|.+.... ...++++.+.+
T Consensus 36 ~~~vvllHG~~~-----------~~~~~----~~~~~~L~~~~~g~~vi~~D~~---G~G~s~~~~---~~~~~~~~~~l 94 (302)
T 1pja_A 36 YKPVIVVHGLFD-----------SSYSF----RHLLEYINETHPGTVVTVLDLF---DGRESLRPL---WEQVQGFREAV 94 (302)
T ss_dssp CCCEEEECCTTC-----------CGGGG----HHHHHHHHHHSTTCCEEECCSS---CSGGGGSCH---HHHHHHHHHHH
T ss_pred CCeEEEECCCCC-----------ChhHH----HHHHHHHHhcCCCcEEEEeccC---CCccchhhH---HHHHHHHHHHH
Confidence 578999999652 11222 2345577777 9999996654 555553322 23455556666
Q ss_pred HHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC-ceeEEEeCCCCCCCCCCCCCc-----cc----------------
Q 011049 333 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-LFCCGIARSGSYNKTLTPFGF-----QT---------------- 390 (494)
Q Consensus 333 ~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~-~~~a~v~~~~~~~~~~~~~~~-----~~---------------- 390 (494)
..+.+.. .+++.++|||+||.+++.++.++|+ +++++|++++........... ..
T Consensus 95 ~~~~~~~---~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (302)
T 1pja_A 95 VPIMAKA---PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWGQ 171 (302)
T ss_dssp HHHHHHC---TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHHHHHCTTCCHHHHHHHHTSTTGG
T ss_pred HHHhhcC---CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhhhhHHHHHHHHHHhhccchHHHH
Confidence 6665554 3789999999999999999999999 799999988764321110000 00
Q ss_pred --ccccccccH---HHHHhcC-----------------ccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHH-------
Q 011049 391 --EFRTLWEAT---NVYIEMS-----------------PITHANKIKKPILIIHGEVDDKVGLFPMQAERFFD------- 441 (494)
Q Consensus 391 --~~~~~~~~~---~~~~~~s-----------------p~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~------- 441 (494)
.....|.++ +.+...+ ....+.+++ |+|+++|++|..+| +..+..+.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~--~~~~~~~~~~~~~~~~ 248 (302)
T 1pja_A 172 EFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVIT--PWQSSFFGFYDANETV 248 (302)
T ss_dssp GSTGGGGBCCTTCHHHHHHHCSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSS--SGGGGGTCEECTTCCE
T ss_pred HhhhhhcccChhhhhhhhccchHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccc--hhHhhHhhhcCCcccc
Confidence 000001111 1111000 123456788 99999999999987 776655532
Q ss_pred -----------------HHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 442 -----------------ALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 442 -----------------~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
.+... .++++++++++||.... +..+.+.+.+.+||
T Consensus 249 ~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl 301 (302)
T 1pja_A 249 LEMEEQLVYLRDSFGLKTLLAR-GAIVRCPMAGISHTAWH-SNRTLYETCIEPWL 301 (302)
T ss_dssp ECGGGSHHHHTTTTSHHHHHHT-TCEEEEECSSCCTTTTT-SCHHHHHHHTGGGC
T ss_pred cchhhhhhhhhhhhchhhHhhc-CCeEEEEecCccccccc-cCHHHHHHHHHHhc
Confidence 22222 23899999999998663 56667777777765
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=2.4e-15 Score=139.66 Aligned_cols=146 Identities=15% Similarity=0.111 Sum_probs=101.7
Q ss_pred CCCCCCcEEEEecChHHHHHHHHHHhCCCcee-EEEeCCCCCCCCCCCC-Cccccc---cc--ccccHHHHHhcCccccc
Q 011049 339 GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFC-CGIARSGSYNKTLTPF-GFQTEF---RT--LWEATNVYIEMSPITHA 411 (494)
Q Consensus 339 ~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~-a~v~~~~~~~~~~~~~-~~~~~~---~~--~~~~~~~~~~~sp~~~~ 411 (494)
..+|++||+|+|+|+||++++.++..+|++|+ +++++++......... ...... .. .++........+++..+
T Consensus 6 ~~iD~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 85 (318)
T 2d81_A 6 FNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCMYNGYPSITTPTANMKSWSGNQIASV 85 (318)
T ss_dssp CCEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSCGGGGSTTCCCCCHHHHHHHHHHBTTTBCCG
T ss_pred cCcCcceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchHHHHHHhhccCCCCCCHHHHHHHhhcccCChh
Confidence 35899999999999999999999999999999 8777665321100000 000000 00 01111111111566666
Q ss_pred cCCC-CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCC--cEEEEEcCCCCCccCCccc------------------HHH
Q 011049 412 NKIK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHGA--LSRLVLLPFEHHVYAAREN------------------VMH 470 (494)
Q Consensus 412 ~~~~-~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~--~~~~~~~~~~~H~~~~~~~------------------~~~ 470 (494)
.+++ .|+||+||++|.+|| +.++++++++|++.+. +++++++++++|.+..... ..+
T Consensus 86 ~~l~~~Pvli~HG~~D~vVP--~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~~~~~~~c~~~~~pyi~~~~~d 163 (318)
T 2d81_A 86 ANLGQRKIYMWTGSSDTTVG--PNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISNCNYD 163 (318)
T ss_dssp GGGGGCEEEEEEETTCCSSC--HHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCTTCEEECSSC
T ss_pred HcCCCCcEEEEeCCCCCCcC--HHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCcccCccccccCCCCcccCCCCh
Confidence 6654 699999999999998 9999999999999883 7999999999999743221 245
Q ss_pred HHHHHHHHHHHhcCCC
Q 011049 471 VIWETDRWLQKYCLSN 486 (494)
Q Consensus 471 ~~~~~~~fl~~~l~~~ 486 (494)
...+|++||...+...
T Consensus 164 ~~~~i~~ff~g~~~~~ 179 (318)
T 2d81_A 164 GAGAALKWIYGSLNAR 179 (318)
T ss_dssp HHHHHHHHHHSSCCCC
T ss_pred HHHHHHHHHhccCCCC
Confidence 6778999998877543
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=99.61 E-value=6e-14 Score=129.73 Aligned_cols=216 Identities=15% Similarity=0.162 Sum_probs=129.8
Q ss_pred ceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCC--------C
Q 011049 235 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPS--------I 306 (494)
Q Consensus 235 ~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--------~ 306 (494)
..+.+.||+|.+. ++|.|+||.+||+. +. ..+||+++..++ +
T Consensus 90 ~~~~~~i~lP~~~----~~p~Pvii~i~~~~----------------~~----------~~~G~a~~~~~~~~v~~~~~~ 139 (375)
T 3pic_A 90 ISFTVTITYPSSG----TAPYPAIIGYGGGS----------------LP----------APAGVAMINFNNDNIAAQVNT 139 (375)
T ss_dssp EEEEEEEECCSSS----CSSEEEEEEETTCS----------------SC----------CCTTCEEEEECHHHHSCCSSG
T ss_pred eEEEEEEECCCCC----CCCccEEEEECCCc----------------cc----------cCCCeEEEEecccccccccCC
Confidence 4689999999752 35699999999742 10 457999987443 2
Q ss_pred CCCCCCCCC------CCchhHHHHHHHHHHHHHHHHHcC--CCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC
Q 011049 307 PIIGEGDKL------PNDRFVEQLVSSAEAAVEEVVRRG--VADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 307 ~~~g~g~~~------~~~~~~~~~~~d~~~~v~~l~~~~--~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 378 (494)
+++|+|.-. .........+-++..+++||..+. .||++||+|+|||+||..++++++.. ++|+++|+.++.
T Consensus 140 gs~g~g~f~~ly~~~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D-~Ri~~~v~~~~g 218 (375)
T 3pic_A 140 GSRGQGKFYDLYGSSHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFE-KRIVLTLPQESG 218 (375)
T ss_dssp GGTTCSHHHHHHCTTCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHC-TTEEEEEEESCC
T ss_pred CCccceecccccCCccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcC-CceEEEEeccCC
Confidence 233433200 000112223568899999999998 89999999999999999999999998 699999998764
Q ss_pred CCCCCC-C-------CC--cc---c-ccccccccHH--HHHh---cCcc---ccccCC-CCCEEEEecCCCCCCCCCHHH
Q 011049 379 YNKTLT-P-------FG--FQ---T-EFRTLWEATN--VYIE---MSPI---THANKI-KKPILIIHGEVDDKVGLFPMQ 435 (494)
Q Consensus 379 ~~~~~~-~-------~~--~~---~-~~~~~~~~~~--~~~~---~sp~---~~~~~~-~~P~li~~G~~D~~v~~~~~~ 435 (494)
.+-... . ++ .. . .....|-.+. .|.. .-|+ ..+.-+ ..|+|++.| .|..++ +..
T Consensus 219 ~~G~~~~R~~~~~~~~Ge~v~~~~~~~~e~~Wf~~~~~~y~~~~~~lP~D~h~L~ALiAPRPllv~~g-~D~w~~--~~g 295 (375)
T 3pic_A 219 AGGSACWRISDYLKSQGANIQTASEIIGEDPWFSTTFNSYVNQVPVLPFDHHSLAALIAPRGLFVIDN-NIDWLG--PQS 295 (375)
T ss_dssp TTTTSCHHHHHHHHHTTCCCCCHHHHTTTCSCSCGGGGGTTTCGGGSSCCHHHHHHTSTTSEEEEECC-CCGGGC--HHH
T ss_pred CCchhhhhhhhhhcccCccccccccccCcccccccchhhhcccccccCcCHHHHHHHhCCceEEEecC-CCcccC--cHH
Confidence 321100 0 00 00 0 0001222111 1110 0111 112223 378999999 888876 665
Q ss_pred HHHHHHHH----HhCCC--cEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCCCCC
Q 011049 436 AERFFDAL----KGHGA--LSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNTS 488 (494)
Q Consensus 436 ~~~~~~~l----~~~g~--~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 488 (494)
....+.++ +..|. ++.+.+..+.+|..... ....++.+||+++|++...
T Consensus 296 ~~~~~~~a~~VY~~lG~~d~~~~~~~ggH~Hc~fp~----~~~~~~~~F~~k~L~~~~~ 350 (375)
T 3pic_A 296 CFGCMTAAHMAWQALGVSDHMGYSQIGAHAHCAFPS----NQQSQLTAFVQKFLLGQST 350 (375)
T ss_dssp HHHHHHHHHHHHHHTTCGGGEEEECCSCCSTTCCCG----GGHHHHHHHHHHHTSCCCC
T ss_pred HHHHHHHHHHHHHHcCCccceEEEeeCCCccccCCH----HHHHHHHHHHHHHhCCCCC
Confidence 54444444 34454 35665434445533222 2246789999999998643
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=7.1e-14 Score=130.55 Aligned_cols=214 Identities=15% Similarity=0.176 Sum_probs=128.5
Q ss_pred eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCC--------CC
Q 011049 236 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPS--------IP 307 (494)
Q Consensus 236 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--------~~ 307 (494)
.+.+.||+|.+ ++|.|+||.+||+. + ...+||+++..++ .+
T Consensus 124 sf~~~i~lP~g-----~~P~Pvii~~~~~~----------------~----------~~~~G~A~i~f~~~~va~d~~~g 172 (433)
T 4g4g_A 124 SFSASIRKPSG-----AGPFPAIIGIGGAS----------------I----------PIPSNVATITFNNDEFGAQMGSG 172 (433)
T ss_dssp EEEEEEECCSS-----SCCEEEEEEESCCC----------------S----------CCCTTSEEEEECHHHHSCCSSGG
T ss_pred EEEEEEECCCC-----CCCccEEEEECCCc----------------c----------ccCCCeEEEEeCCcccccccCCC
Confidence 56999999976 35699999998631 1 0457999988443 22
Q ss_pred CCCCCCCC------CCchhHHHHHHHHHHHHHHHHH----cCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCC
Q 011049 308 IIGEGDKL------PNDRFVEQLVSSAEAAVEEVVR----RGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 377 (494)
Q Consensus 308 ~~g~g~~~------~~~~~~~~~~~d~~~~v~~l~~----~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 377 (494)
++|+|.-. ..........-++..+++||.. +..||++||+|+|+|+||..++++++.. ++|+++|+.++
T Consensus 173 srG~g~f~~ly~~~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D-~Ri~~vi~~~s 251 (433)
T 4g4g_A 173 SRGQGKFYDLFGRDHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALV-DRIALTIPQES 251 (433)
T ss_dssp GTTCSHHHHHHCTTCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHC-TTCSEEEEESC
T ss_pred cCCccccccccCCccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcC-CceEEEEEecC
Confidence 33433200 0011122235688999999999 8889999999999999999999999998 69999999876
Q ss_pred CCCCCCCC--------CC--cccc----cccccccH--HHHHh---cCcccc---ccCC-CCCEEEEecCCCCCCCCCHH
Q 011049 378 SYNKTLTP--------FG--FQTE----FRTLWEAT--NVYIE---MSPITH---ANKI-KKPILIIHGEVDDKVGLFPM 434 (494)
Q Consensus 378 ~~~~~~~~--------~~--~~~~----~~~~~~~~--~~~~~---~sp~~~---~~~~-~~P~li~~G~~D~~v~~~~~ 434 (494)
..+-.... ++ .... ....|-.+ ..|.. .-|+.+ +.-+ ..|+|++.| +|...+ +.
T Consensus 252 g~~G~~~~R~~~~~~~~Ge~v~~~~~~~ge~~Wf~~~f~~y~~~~~~LPfD~heL~ALiAPRPlLv~~g-~D~w~~--p~ 328 (433)
T 4g4g_A 252 GAGGAACWRISDQQKAAGANIQTAAQIITENPWFSRNFDPHVNSITSVPQDHHLLAALIVPRGLAVFEN-NIDWLG--PV 328 (433)
T ss_dssp CTTTTSCHHHHHHHHHTTCCCCCHHHHTTTCCCSCTTTGGGTTCGGGSSCCGGGHHHHHTTSEEEEEEC-CCTTTC--HH
T ss_pred CCCchhhhhhchhhcccCcchhhhhcccCCccccchhhHhhccccccCCcCHHHHHHhhCCceEEEecC-CCCcCC--cH
Confidence 43311000 00 0000 00122111 11110 001111 1112 478999999 888876 66
Q ss_pred HHHHHHHHHH----hCC--CcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCCCCC
Q 011049 435 QAERFFDALK----GHG--ALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNTS 488 (494)
Q Consensus 435 ~~~~~~~~l~----~~g--~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 488 (494)
.....+.+++ ..| -++.+.+.++.+|.....+ ....+.+||+++|++...
T Consensus 329 g~~~a~~aa~~VY~~lGa~d~l~~~~~ggH~Hc~fp~~----~r~~~~~F~~k~Lkg~~~ 384 (433)
T 4g4g_A 329 STTGCMAAGRLIYKAYGVPNNMGFSLVGGHNHCQFPSS----QNQDLNSYINYFLLGQGS 384 (433)
T ss_dssp HHHHHHHHHHHHHHHHTCGGGEEEEECCSSCTTCCCGG----GHHHHHHHHHHHTTCCSC
T ss_pred HHHHHHHHHHHHHHHcCCccceEEEeeCCCCcccCCHH----HHHHHHHHHHHHhCCCCC
Confidence 5443433332 234 3466766556566533222 246678999999988644
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.60 E-value=1.9e-14 Score=123.78 Aligned_cols=169 Identities=12% Similarity=-0.046 Sum_probs=109.9
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCe---EEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF---AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~---~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~ 331 (494)
.|+||++||.+. +...| ......|+++|| .|+.++.+ |+|.+.. ...++..++
T Consensus 3 ~~~vv~~HG~~~-----------~~~~~----~~~~~~l~~~G~~~~~v~~~d~~---g~g~s~~--~~~~~~~~~---- 58 (181)
T 1isp_A 3 HNPVVMVHGIGG-----------ASFNF----AGIKSYLVSQGWSRDKLYAVDFW---DKTGTNY--NNGPVLSRF---- 58 (181)
T ss_dssp CCCEEEECCTTC-----------CGGGG----HHHHHHHHHTTCCGGGEEECCCS---CTTCCHH--HHHHHHHHH----
T ss_pred CCeEEEECCcCC-----------CHhHH----HHHHHHHHHcCCCCccEEEEecC---CCCCchh--hhHHHHHHH----
Confidence 478999999652 11222 234557888998 58885654 4444311 122333333
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC--CCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccc
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPIT 409 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~--p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~ 409 (494)
+..+++. .+.+++.++|||+||.+++.++.++ |++++++|+++|........ . .. ..
T Consensus 59 ~~~~~~~--~~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~~------~---~~------~~---- 117 (181)
T 1isp_A 59 VQKVLDE--TGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGK------A---LP------GT---- 117 (181)
T ss_dssp HHHHHHH--HCCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSB------C---CC------CS----
T ss_pred HHHHHHH--cCCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCcccccccc------c---CC------CC----
Confidence 3333332 1347899999999999999999988 88999999998864321100 0 00 00
Q ss_pred cccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 410 HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 410 ~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
....++|+|+++|++|..+| +..+. -...+++++++++|.+... .. .+.+.+.+||.+.
T Consensus 118 -~~~~~~p~l~i~G~~D~~v~--~~~~~---------~~~~~~~~~~~~gH~~~~~-~~-~~~~~i~~fl~~~ 176 (181)
T 1isp_A 118 -DPNQKILYTSIYSSADMIVM--NYLSR---------LDGARNVQIHGVGHIGLLY-SS-QVNSLIKEGLNGG 176 (181)
T ss_dssp -CTTCCCEEEEEEETTCSSSC--HHHHC---------CBTSEEEEESSCCTGGGGG-CH-HHHHHHHHHHTTT
T ss_pred -CCccCCcEEEEecCCCcccc--ccccc---------CCCCcceeeccCchHhhcc-CH-HHHHHHHHHHhcc
Confidence 01235799999999999997 66321 2346899999999987643 33 6788888888764
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=99.60 E-value=9.2e-14 Score=129.46 Aligned_cols=207 Identities=14% Similarity=0.019 Sum_probs=125.6
Q ss_pred cCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCC
Q 011049 231 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 310 (494)
Q Consensus 231 ~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g 310 (494)
..+|.++.+...- + .|.||++||.+.+ ...|. .....|+++ |.|+++|.+ |
T Consensus 15 ~~~g~~l~y~~~G--------~--g~~lvllHG~~~~-----------~~~w~----~~~~~L~~~-~~via~Dl~---G 65 (294)
T 1ehy_A 15 QLPDVKIHYVREG--------A--GPTLLLLHGWPGF-----------WWEWS----KVIGPLAEH-YDVIVPDLR---G 65 (294)
T ss_dssp ECSSCEEEEEEEE--------C--SSEEEEECCSSCC-----------GGGGH----HHHHHHHTT-SEEEEECCT---T
T ss_pred EECCEEEEEEEcC--------C--CCEEEEECCCCcc-----------hhhHH----HHHHHHhhc-CEEEecCCC---C
Confidence 3578888776542 1 3679999997521 11221 233455554 999995554 5
Q ss_pred CCCCCCCc------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC
Q 011049 311 EGDKLPND------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT 384 (494)
Q Consensus 311 ~g~~~~~~------~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~ 384 (494)
+|.+.... ...+..++|+.+.++.+ + -+++.++|||+||.+++.+|.++|++++++|++++.......
T Consensus 66 ~G~S~~~~~~~~~~~~~~~~a~dl~~ll~~l---~---~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~ 139 (294)
T 1ehy_A 66 FGDSEKPDLNDLSKYSLDKAADDQAALLDAL---G---IEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGP 139 (294)
T ss_dssp STTSCCCCTTCGGGGCHHHHHHHHHHHHHHT---T---CCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC--
T ss_pred CCCCCCCccccccCcCHHHHHHHHHHHHHHc---C---CCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcch
Confidence 66654332 22456677777766654 3 368999999999999999999999999999998863211000
Q ss_pred ----------CCC--cc----------c-c---c-------------cccccc--HHHHHhc------------------
Q 011049 385 ----------PFG--FQ----------T-E---F-------------RTLWEA--TNVYIEM------------------ 405 (494)
Q Consensus 385 ----------~~~--~~----------~-~---~-------------~~~~~~--~~~~~~~------------------ 405 (494)
.+. +. . . . ...+.. .+.+...
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (294)
T 1ehy_A 140 VYFGLGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANI 219 (294)
T ss_dssp ---------CCHHHHHTTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHS
T ss_pred hhccchhccCceEEEecCcchhHHHhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHHHHHHH
Confidence 000 00 0 0 0 000000 0111100
Q ss_pred -Cccc-----cccCCCCCEEEEecCCCCCCCCCH-HHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHH
Q 011049 406 -SPIT-----HANKIKKPILIIHGEVDDKVGLFP-MQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRW 478 (494)
Q Consensus 406 -sp~~-----~~~~~~~P~li~~G~~D~~v~~~~-~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f 478 (494)
.... .+.++++|+|+++|++|..+| . .....+.+. -..+++++++++||... .+..+.+.+.+.+|
T Consensus 220 ~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~--~~~~~~~~~~~----~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~f 292 (294)
T 1ehy_A 220 RPDAALWTDLDHTMSDLPVTMIWGLGDTCVP--YAPLIEFVPKY----YSNYTMETIEDCGHFLM-VEKPEIAIDRIKTA 292 (294)
T ss_dssp SSSCCCCCTGGGSCBCSCEEEEEECCSSCCT--THHHHHHHHHH----BSSEEEEEETTCCSCHH-HHCHHHHHHHHHHH
T ss_pred hhhhhhcCCcccCcCCCCEEEEEeCCCCCcc--hHHHHHHHHHH----cCCCceEEeCCCCCChh-hhCHHHHHHHHHHH
Confidence 0000 122788999999999999875 4 333333332 23589999999999866 36677788888888
Q ss_pred H
Q 011049 479 L 479 (494)
Q Consensus 479 l 479 (494)
|
T Consensus 293 l 293 (294)
T 1ehy_A 293 F 293 (294)
T ss_dssp C
T ss_pred h
Confidence 6
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.58 E-value=3.1e-14 Score=131.93 Aligned_cols=216 Identities=13% Similarity=0.058 Sum_probs=129.2
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCc-cCC-CCchhHHHHHhCCeEEEeCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNE-FSG-MTPTSSLIFLARRFAVLAGPSIPII 309 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~l~~~G~~v~~~~~~~~~ 309 (494)
.+|.++.+...-+++ ...|+||++||.+.+. .. |.. +.......| +++|.|+++|.+|.
T Consensus 18 ~~~~~l~y~~~G~~~------~~~p~vvllHG~~~~~-----------~~~~~~~~~~~~~~~L-~~~~~vi~~D~~G~- 78 (286)
T 2qmq_A 18 TPYGSVTFTVYGTPK------PKRPAIFTYHDVGLNY-----------KSCFQPLFRFGDMQEI-IQNFVRVHVDAPGM- 78 (286)
T ss_dssp ETTEEEEEEEESCCC------TTCCEEEEECCTTCCH-----------HHHHHHHHTSHHHHHH-HTTSCEEEEECTTT-
T ss_pred cCCeEEEEEeccCCC------CCCCeEEEeCCCCCCc-----------hhhhhhhhhhchhHHH-hcCCCEEEecCCCC-
Confidence 367788777764431 1258999999965211 10 110 000023344 45799999666542
Q ss_pred CCCCCCCCch----hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC
Q 011049 310 GEGDKLPNDR----FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP 385 (494)
Q Consensus 310 g~g~~~~~~~----~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~ 385 (494)
|.+.+..... ..+..++|+.+.++.+ +.+++.++|||+||.+++.++..+|++++++|++++........
T Consensus 79 G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 152 (286)
T 2qmq_A 79 EEGAPVFPLGYQYPSLDQLADMIPCILQYL------NFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWM 152 (286)
T ss_dssp STTCCCCCTTCCCCCHHHHHHTHHHHHHHH------TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCHH
T ss_pred CCCCCCCCCCCCccCHHHHHHHHHHHHHHh------CCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccchh
Confidence 2222211111 3566677777777665 23589999999999999999999999999999998864321000
Q ss_pred -----------CC---------ccccc-ccccccH----------------HHHH----hcCc----cccccCCCCCEEE
Q 011049 386 -----------FG---------FQTEF-RTLWEAT----------------NVYI----EMSP----ITHANKIKKPILI 420 (494)
Q Consensus 386 -----------~~---------~~~~~-~~~~~~~----------------~~~~----~~sp----~~~~~~~~~P~li 420 (494)
.. +.... ....... ..+. .... ...+.++++|+|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 232 (286)
T 2qmq_A 153 DWAAHKLTGLTSSIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVML 232 (286)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHSCHHHHHTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEE
T ss_pred hhhhhhhccccccchHHHHHHHhcCCCCCcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEE
Confidence 00 00000 0000000 0010 0011 1245678999999
Q ss_pred EecCCCCCCCCCHHHHHHHHHHHHhCCC-cEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 421 IHGEVDDKVGLFPMQAERFFDALKGHGA-LSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 421 ~~G~~D~~v~~~~~~~~~~~~~l~~~g~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
++|++|..+| . ..+.+++... .+++++++++||.+.. +....+.+.+.+||+
T Consensus 233 i~G~~D~~~~---~----~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 233 VVGDQAPHED---A----VVECNSKLDPTQTSFLKMADSGGQPQL-TQPGKLTEAFKYFLQ 285 (286)
T ss_dssp EEETTSTTHH---H----HHHHHHHSCGGGEEEEEETTCTTCHHH-HCHHHHHHHHHHHHC
T ss_pred EecCCCcccc---H----HHHHHHHhcCCCceEEEeCCCCCcccc-cChHHHHHHHHHHhc
Confidence 9999999863 2 2444455444 5899999999998753 556778888888874
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=99.58 E-value=7.7e-15 Score=133.92 Aligned_cols=189 Identities=11% Similarity=0.048 Sum_probs=114.2
Q ss_pred EEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCch-hHHHHHHHHHHHHHHH
Q 011049 257 CLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDR-FVEQLVSSAEAAVEEV 335 (494)
Q Consensus 257 ~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~-~~~~~~~d~~~~v~~l 335 (494)
.||++||.+.+ ...|. .....| +.+|.|+++|.+ |+|.+..... ..+.. ++.+
T Consensus 15 ~vvllHG~~~~-----------~~~w~----~~~~~L-~~~~~vi~~Dl~---G~G~S~~~~~~~~~~~-------~~~l 68 (258)
T 1m33_A 15 HLVLLHGWGLN-----------AEVWR----CIDEEL-SSHFTLHLVDLP---GFGRSRGFGALSLADM-------AEAV 68 (258)
T ss_dssp EEEEECCTTCC-----------GGGGG----GTHHHH-HTTSEEEEECCT---TSTTCCSCCCCCHHHH-------HHHH
T ss_pred eEEEECCCCCC-----------hHHHH----HHHHHh-hcCcEEEEeeCC---CCCCCCCCCCcCHHHH-------HHHH
Confidence 79999996521 12232 233344 468999995554 5665543321 12222 2333
Q ss_pred HHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC-CCCC-cccc--------c-------------
Q 011049 336 VRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL-TPFG-FQTE--------F------------- 392 (494)
Q Consensus 336 ~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~-~~~~-~~~~--------~------------- 392 (494)
.+. ++ +++.++|||+||.+++.+|.++|++++++|++++...... ..+. .... .
T Consensus 69 ~~~--l~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (258)
T 1m33_A 69 LQQ--AP-DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLA 145 (258)
T ss_dssp HTT--SC-SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHH--hC-CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHHHH
Confidence 332 34 7899999999999999999999999999998775421100 0000 0000 0
Q ss_pred ----cccc--ccHH----------------------HHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 011049 393 ----RTLW--EATN----------------------VYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALK 444 (494)
Q Consensus 393 ----~~~~--~~~~----------------------~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~ 444 (494)
.... ...+ .+...+....+.++++|+|+++|++|..+| ...++.+.+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~-- 221 (258)
T 1m33_A 146 LQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVP--RKVVPMLDKL-- 221 (258)
T ss_dssp TTSTTSTTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSC--GGGCC-CTTT--
T ss_pred HHhcCCccchhhHHHHHHHHHhccCCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCC--HHHHHHHHHh--
Confidence 0000 0000 011112223456789999999999999987 6655444333
Q ss_pred hCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 445 GHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 445 ~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
-...++++++++||.... +..+.+.+.+.+|+.+
T Consensus 222 --~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 255 (258)
T 1m33_A 222 --WPHSESYIFAKAAHAPFI-SHPAEFCHLLVALKQR 255 (258)
T ss_dssp --CTTCEEEEETTCCSCHHH-HSHHHHHHHHHHHHTT
T ss_pred --CccceEEEeCCCCCCccc-cCHHHHHHHHHHHHHh
Confidence 234689999999998753 5567788888898864
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=99.58 E-value=7.1e-16 Score=153.04 Aligned_cols=211 Identities=18% Similarity=0.092 Sum_probs=135.2
Q ss_pred eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCC-eEEEeCCCC-CCCCCCC
Q 011049 236 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR-FAVLAGPSI-PIIGEGD 313 (494)
Q Consensus 236 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-~~v~~~~~~-~~~g~g~ 313 (494)
-+...+|.|+.. . .++|+||++|||+|..++... +. .....|+++| ++|+.+++| +..|++.
T Consensus 82 cL~l~v~~P~~~--~--~~~PviV~iHGGg~~~g~~~~--------~~----~~~~~la~~g~~vvv~~nYRlg~~Gf~~ 145 (489)
T 1qe3_A 82 CLYVNVFAPDTP--S--QNLPVMVWIHGGAFYLGAGSE--------PL----YDGSKLAAQGEVIVVTLNYRLGPFGFLH 145 (489)
T ss_dssp CCEEEEEEECSS--C--CSEEEEEEECCSTTTSCCTTS--------GG----GCCHHHHHHHTCEEEEECCCCHHHHSCC
T ss_pred CCEEEEEeCCCC--C--CCCCEEEEECCCccccCCCCC--------cc----cCHHHHHhcCCEEEEecCccCcccccCc
Confidence 366778888752 1 238999999999875433221 11 1234667765 999999988 3334432
Q ss_pred CCC--CchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEecChHHHHHHHHHHhC--CCceeEEEeCCCCCCCCCCCC
Q 011049 314 KLP--NDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYNKTLTPF 386 (494)
Q Consensus 314 ~~~--~~~~~~~~~~d~~~~v~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~~~--p~~~~a~v~~~~~~~~~~~~~ 386 (494)
... .....+....|+.++++|+.++. ..|++||.|+|+|+||+++..++... +++|+++|+.+|..+......
T Consensus 146 ~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~ 225 (489)
T 1qe3_A 146 LSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQ 225 (489)
T ss_dssp CTTTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCBCHHH
T ss_pred cccccccCCCCcchHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCCCCCCHHH
Confidence 211 01112334778889999998752 36999999999999999998887753 478999999999763211000
Q ss_pred C------cccccccccccH---------HHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEE
Q 011049 387 G------FQTEFRTLWEAT---------NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSR 451 (494)
Q Consensus 387 ~------~~~~~~~~~~~~---------~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~ 451 (494)
. +....+...+.. +.+...+++.+......|.+++++..|..+. +.+..+++++.+..++++.
T Consensus 226 ~~~~~~~~~~~~g~~~~~~~~Lr~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~D~~~~--~~~~~~~~~~~~~~~vp~~ 303 (489)
T 1qe3_A 226 AASTAAAFLQVLGINESQLDRLHTVAAEDLLKAADQLRIAEKENIFQLFFQPALDPKTL--PEEPEKSIAEGAASGIPLL 303 (489)
T ss_dssp HHHHHHHHHHHHTCCTTCGGGGGTSCHHHHHHHHHHHHTSTTCCTTSCSSCCBCBTTTB--CSCHHHHHHTTTTTTCCEE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHcCCHHHHHHHHHHhhhccccccCCccceEeECCeec--CcCHHHHHhcCCCCCCCEE
Confidence 0 000000000111 1112222222122334567889999999886 7888888888888899999
Q ss_pred EEEcCCCCCccCC
Q 011049 452 LVLLPFEHHVYAA 464 (494)
Q Consensus 452 ~~~~~~~~H~~~~ 464 (494)
+-.+++++|.+..
T Consensus 304 ~g~~~~Eg~~~~~ 316 (489)
T 1qe3_A 304 IGTTRDEGYLFFT 316 (489)
T ss_dssp EEEETTGGGGTCC
T ss_pred EeeecchhHhhcc
Confidence 9999999998764
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=99.56 E-value=9.2e-14 Score=131.00 Aligned_cols=214 Identities=10% Similarity=-0.007 Sum_probs=123.3
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
.+|.++.+... + .++.|.||++||.+.+ ...|.. ....|+ ..|.|+++|. +|+
T Consensus 28 ~~g~~l~y~~~---G-----~g~~~~vvllHG~~~~-----------~~~w~~----~~~~L~-~~~~via~Dl---~Gh 80 (318)
T 2psd_A 28 VLDSFINYYDS---E-----KHAENAVIFLHGNATS-----------SYLWRH----VVPHIE-PVARCIIPDL---IGM 80 (318)
T ss_dssp ETTEEEEEEEC---C-----SCTTSEEEEECCTTCC-----------GGGGTT----TGGGTT-TTSEEEEECC---TTS
T ss_pred eCCeEEEEEEc---C-----CCCCCeEEEECCCCCc-----------HHHHHH----HHHHhh-hcCeEEEEeC---CCC
Confidence 57777765542 1 1224689999997522 122332 222333 4578888554 466
Q ss_pred CCCCCC--c-hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCC----CC
Q 011049 312 GDKLPN--D-RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT----LT 384 (494)
Q Consensus 312 g~~~~~--~-~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~----~~ 384 (494)
|.+... . ...+..++|+.+.++.+ + + .+++.|+||||||.+++.+|.++|++++++|++++..... ..
T Consensus 81 G~S~~~~~~~~~~~~~a~dl~~ll~~l---~-~-~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~ 155 (318)
T 2psd_A 81 GKSGKSGNGSYRLLDHYKYLTAWFELL---N-L-PKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEW 155 (318)
T ss_dssp TTCCCCTTSCCSHHHHHHHHHHHHTTS---C-C-CSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTS
T ss_pred CCCCCCCCCccCHHHHHHHHHHHHHhc---C-C-CCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhh
Confidence 665432 1 12455566655554432 2 2 2689999999999999999999999999999865432110 00
Q ss_pred CCC------cccc-------------------c-cccc--ccHHHHH-----------------hcCc------------
Q 011049 385 PFG------FQTE-------------------F-RTLW--EATNVYI-----------------EMSP------------ 407 (494)
Q Consensus 385 ~~~------~~~~-------------------~-~~~~--~~~~~~~-----------------~~sp------------ 407 (494)
+.. +... . .... +..+.|. ...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (318)
T 2psd_A 156 PDIEEDIALIKSEEGEKMVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQI 235 (318)
T ss_dssp CSCHHHHHHHHSTHHHHHHTTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHH
T ss_pred hhHHHHHHHHhcccchhhhhcchHHHHhhccccccccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHHH
Confidence 000 0000 0 0000 0000000 0000
Q ss_pred ----cccccCC-CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 408 ----ITHANKI-KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 408 ----~~~~~~~-~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
...+.++ ++|+|+++|++| .++ . .+.++.+.+ ...+++++ ++||... .+....+.+.+.+||.+.
T Consensus 236 ~~~~~~~l~~i~~~P~Lvi~G~~D-~~~--~-~~~~~~~~~----~~~~~~~i-~~gH~~~-~e~p~~~~~~i~~fl~~~ 305 (318)
T 2psd_A 236 VRNYNAYLRASDDLPKLFIESDPG-FFS--N-AIVEGAKKF----PNTEFVKV-KGLHFLQ-EDAPDEMGKYIKSFVERV 305 (318)
T ss_dssp HHHHHHHHHTCTTSCEEEEEEEEC-SSH--H-HHHHHHTTS----SSEEEEEE-EESSSGG-GTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccccCCCeEEEEeccc-cCc--H-HHHHHHHhC----CCcEEEEe-cCCCCCH-hhCHHHHHHHHHHHHHHh
Confidence 0123457 899999999999 775 5 544444333 34677777 6799766 467888999999999987
Q ss_pred cCCCC
Q 011049 483 CLSNT 487 (494)
Q Consensus 483 l~~~~ 487 (494)
.....
T Consensus 306 ~~~~~ 310 (318)
T 2psd_A 306 LKNEQ 310 (318)
T ss_dssp HC---
T ss_pred hcccc
Confidence 65543
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.54 E-value=5.7e-14 Score=128.64 Aligned_cols=194 Identities=13% Similarity=0.126 Sum_probs=112.5
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND-RFVEQLVSSAEAAVE 333 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~-~~~~~~~~d~~~~v~ 333 (494)
.|.||++||.+. +...|. .....|+++||.|+++|. +|+|.+.... ...++.++|+.+.+
T Consensus 16 ~~~vvllHG~~~-----------~~~~w~----~~~~~L~~~~~~vi~~Dl---~GhG~S~~~~~~~~~~~a~~l~~~l- 76 (264)
T 1r3d_A 16 TPLVVLVHGLLG-----------SGADWQ----PVLSHLARTQCAALTLDL---PGHGTNPERHCDNFAEAVEMIEQTV- 76 (264)
T ss_dssp BCEEEEECCTTC-----------CGGGGH----HHHHHHTTSSCEEEEECC---TTCSSCC-------CHHHHHHHHHH-
T ss_pred CCcEEEEcCCCC-----------CHHHHH----HHHHHhcccCceEEEecC---CCCCCCCCCCccCHHHHHHHHHHHH-
Confidence 388999999652 112232 234455558999999555 4566654321 11233344444333
Q ss_pred HHHHcCCCCCCcEEEEecChHHHHHHH---HHHhCCCceeEEEeCCCCCCCCCCC-----------CC-------ccc--
Q 011049 334 EVVRRGVADPSRIAVGGHSYGAFMTAH---LLAHAPHLFCCGIARSGSYNKTLTP-----------FG-------FQT-- 390 (494)
Q Consensus 334 ~l~~~~~~d~~ri~i~G~S~GG~~a~~---~~~~~p~~~~a~v~~~~~~~~~~~~-----------~~-------~~~-- 390 (494)
+.-.+++.++.++||||||.+++. ++.++|++++++|..++........ +. ...
T Consensus 77 ---~~l~~~~~p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (264)
T 1r3d_A 77 ---QAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVL 153 (264)
T ss_dssp ---HTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred ---HHhCcCCCceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhhhhhhcccHHHHHHhccccHHHHH
Confidence 332233224999999999999999 8888999999999877643211000 00 000
Q ss_pred -c-c-ccccc-----------------cHH----HHHh------cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHH
Q 011049 391 -E-F-RTLWE-----------------ATN----VYIE------MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFF 440 (494)
Q Consensus 391 -~-~-~~~~~-----------------~~~----~~~~------~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~ 440 (494)
. . ...+. ... .+.. .+....+.++++|+|+++|++|..++ .+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-------~~~ 226 (264)
T 1r3d_A 154 SDWYQQAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-------QLA 226 (264)
T ss_dssp HHHTTSGGGTTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-------HHH
T ss_pred HHHhhhhhhhccCHHHHHHHHHHHhhcchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH-------HHH
Confidence 0 0 00000 000 0000 01122356788999999999997531 233
Q ss_pred HHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 441 DALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 441 ~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
+.+. .++++++++||... .+..+.+.+.+.+|+.++.
T Consensus 227 ~~~~-----~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~~ 263 (264)
T 1r3d_A 227 ESSG-----LSYSQVAQAGHNVH-HEQPQAFAKIVQAMIHSII 263 (264)
T ss_dssp HHHC-----SEEEEETTCCSCHH-HHCHHHHHHHHHHHHHHHC
T ss_pred HHhC-----CcEEEcCCCCCchh-hcCHHHHHHHHHHHHHHhc
Confidence 3331 46899999999876 3667788899999998763
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=5.9e-15 Score=136.50 Aligned_cols=224 Identities=13% Similarity=-0.006 Sum_probs=112.2
Q ss_pred ccEEEEEEcCCCc-eEEEEEEeCCCCCCC-----CCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhC
Q 011049 223 QKEMIKYQRKDGV-PLTATLYLPPGYDQS-----KDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR 296 (494)
Q Consensus 223 ~~~~~~~~~~dg~-~~~~~l~~P~~~~~~-----~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 296 (494)
..|.+.|++.++. ....|+..+.. .+. .....|.||++||.+. +...|. .....|+.
T Consensus 14 ~~~~~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lvllHG~~~-----------~~~~~~----~l~~~L~~- 76 (280)
T 3qmv_A 14 GTENLYFQSNALLSQRSAWFPRPVA-APAAEPPDPAAAPLRLVCFPYAGG-----------TVSAFR----GWQERLGD- 76 (280)
T ss_dssp --------------CHHHHSCCCCC-CCCCCCCCTTTCSEEEEEECCTTC-----------CGGGGT----THHHHHCT-
T ss_pred CcceeeeecchhhhhcchheecCCC-CCcccccccCCCCceEEEECCCCC-----------ChHHHH----HHHHhcCC-
Confidence 4567778776663 22233333221 111 0112388999999652 212232 23444544
Q ss_pred CeEEEeCCCCCCCCCCCCCC--CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCcee----
Q 011049 297 RFAVLAGPSIPIIGEGDKLP--NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFC---- 370 (494)
Q Consensus 297 G~~v~~~~~~~~~g~g~~~~--~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~---- 370 (494)
||.|+.++.+ |+|.+.. ......+.++|+.+.++.+. ..+++.|+|||+||.+++.++.++|++++
T Consensus 77 ~~~v~~~D~~---G~G~S~~~~~~~~~~~~a~~~~~~l~~~~-----~~~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~ 148 (280)
T 3qmv_A 77 EVAVVPVQLP---GRGLRLRERPYDTMEPLAEAVADALEEHR-----LTHDYALFGHSMGALLAYEVACVLRRRGAPRPR 148 (280)
T ss_dssp TEEEEECCCT---TSGGGTTSCCCCSHHHHHHHHHHHHHHTT-----CSSSEEEEEETHHHHHHHHHHHHHHHTTCCCCS
T ss_pred CceEEEEeCC---CCCCCCCCCCCCCHHHHHHHHHHHHHHhC-----CCCCEEEEEeCHhHHHHHHHHHHHHHcCCCCce
Confidence 9999996654 4554422 22234555666665555431 34789999999999999999999887665
Q ss_pred EEEeCCCCCCCCCCCCC---ccccc---------ccc---cc--------------cHHHHHhcCccccccCCCCCEEEE
Q 011049 371 CGIARSGSYNKTLTPFG---FQTEF---------RTL---WE--------------ATNVYIEMSPITHANKIKKPILII 421 (494)
Q Consensus 371 a~v~~~~~~~~~~~~~~---~~~~~---------~~~---~~--------------~~~~~~~~sp~~~~~~~~~P~li~ 421 (494)
.++.............. ..... ..+ .. .........+ ..+.++++|+|++
T Consensus 149 ~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~P~l~i 227 (280)
T 3qmv_A 149 HLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDRRLPVLRADLRACERYDW-HPRPPLDCPTTAF 227 (280)
T ss_dssp CEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC---------CCTTHHHHHHHHHHHHTCCC-CCCCCBCSCEEEE
T ss_pred EEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCChhhhcCHHHHHHHHHHHHHHHHHHHhccc-cCCCceecCeEEE
Confidence 55544322110000000 00000 000 00 0000111111 1245788999999
Q ss_pred ecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCC-cccHHHHHHHHHHH
Q 011049 422 HGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA-RENVMHVIWETDRW 478 (494)
Q Consensus 422 ~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~-~~~~~~~~~~~~~f 478 (494)
+|++|..++ ......+.+.+ ....+++++++ +|.... .+....+.+.+.+|
T Consensus 228 ~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~~~~~~~~~~~~i~~~ 279 (280)
T 3qmv_A 228 SAAADPIAT--PEMVEAWRPYT---TGSFLRRHLPG-NHFFLNGGPSRDRLLAHLGTE 279 (280)
T ss_dssp EEEECSSSC--HHHHHTTGGGB---SSCEEEEEEEE-ETTGGGSSHHHHHHHHHHHTT
T ss_pred EecCCCCcC--hHHHHHHHHhc---CCceEEEEecC-CCeEEcCchhHHHHHHHHHhh
Confidence 999999987 77665554433 23467888886 898654 24444555555544
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.27 E-value=1e-15 Score=142.82 Aligned_cols=213 Identities=12% Similarity=0.075 Sum_probs=126.0
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
.+|.++.+... + ..|+||++||.+. +...|.. ....|+ +||.|++++.+ |+
T Consensus 12 ~~g~~~~~~~~---g-------~~p~vv~lHG~~~-----------~~~~~~~----~~~~l~-~g~~v~~~D~~---G~ 62 (304)
T 3b12_A 12 VGDVTINCVVG---G-------SGPALLLLHGFPQ-----------NLHMWAR----VAPLLA-NEYTVVCADLR---GY 62 (304)
Confidence 46766655432 1 1478999999652 1122322 233445 89999996654 55
Q ss_pred CCCCCC-------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC
Q 011049 312 GDKLPN-------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT 384 (494)
Q Consensus 312 g~~~~~-------~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~ 384 (494)
|.+... .....+.++|+.++++.+ +.+++.++|||+||.+++.++.++|++++++|++++.......
T Consensus 63 G~s~~~~~~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 136 (304)
T 3b12_A 63 GGSSKPVGAPDHANYSFRAMASDQRELMRTL------GFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMF 136 (304)
Confidence 555332 112334456666665554 3367999999999999999999999999999998875431100
Q ss_pred C----------C---------------------Ccccc-c-c----c--cc--ccHHHH-----------------Hhc-
Q 011049 385 P----------F---------------------GFQTE-F-R----T--LW--EATNVY-----------------IEM- 405 (494)
Q Consensus 385 ~----------~---------------------~~~~~-~-~----~--~~--~~~~~~-----------------~~~- 405 (494)
. + .+... . . . .. +..+.+ ...
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (304)
T 3b12_A 137 EEVDRFVARAYWHWYFLQQPAPYPEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGG 216 (304)
Confidence 0 0 00000 0 0 0 00 000000 000
Q ss_pred --C----ccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 406 --S----PITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 406 --s----p~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
+ ....+.++++|+|+++|++|..++ +......+.+.+ ..+++.++ ++||.+. .+....+.+.+.+||
T Consensus 217 ~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~-~~~~~~~~~~~~----~~~~~~~i-~~gH~~~-~e~p~~~~~~i~~fl 289 (304)
T 3b12_A 217 TIDFELDHGDLGRQVQCPALVFSGSAGLMHS-LFEMQVVWAPRL----ANMRFASL-PGGHFFV-DRFPDDTARILREFL 289 (304)
Confidence 0 000156788999999999996653 133333333332 23677778 9999876 366678888999999
Q ss_pred HHhcCCC
Q 011049 480 QKYCLSN 486 (494)
Q Consensus 480 ~~~l~~~ 486 (494)
+++..+.
T Consensus 290 ~~~~~~~ 296 (304)
T 3b12_A 290 SDARSGI 296 (304)
Confidence 8876543
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.50 E-value=3.8e-14 Score=131.72 Aligned_cols=168 Identities=11% Similarity=0.095 Sum_probs=104.4
Q ss_pred hCCeEEEeCCCCCCCCCCCCC-CC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeE
Q 011049 295 ARRFAVLAGPSIPIIGEGDKL-PN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCC 371 (494)
Q Consensus 295 ~~G~~v~~~~~~~~~g~g~~~-~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a 371 (494)
.+||.|+++|.+ |+|.+. .. ....++.++|+.+.++.+ + .+++.++|||+||.+++.++.++|+++++
T Consensus 67 ~~~~~vi~~D~~---G~G~S~~~~~~~~~~~~~~~~l~~~l~~~---~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 137 (292)
T 3l80_A 67 PDSIGILTIDAP---NSGYSPVSNQANVGLRDWVNAILMIFEHF---K---FQSYLLCVHSIGGFAALQIMNQSSKACLG 137 (292)
T ss_dssp CTTSEEEEECCT---TSTTSCCCCCTTCCHHHHHHHHHHHHHHS---C---CSEEEEEEETTHHHHHHHHHHHCSSEEEE
T ss_pred hhcCeEEEEcCC---CCCCCCCCCcccccHHHHHHHHHHHHHHh---C---CCCeEEEEEchhHHHHHHHHHhCchheee
Confidence 379999996665 555554 22 223455666666655543 2 35899999999999999999999999999
Q ss_pred EEeCCCCCCCCC--CCCC------------ccc------c---cccccc--------------cHHHHHhcCc-------
Q 011049 372 GIARSGSYNKTL--TPFG------------FQT------E---FRTLWE--------------ATNVYIEMSP------- 407 (494)
Q Consensus 372 ~v~~~~~~~~~~--~~~~------------~~~------~---~~~~~~--------------~~~~~~~~sp------- 407 (494)
+|+++|...... .... ... . ....|- ....+...++
T Consensus 138 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 217 (292)
T 3l80_A 138 FIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIR 217 (292)
T ss_dssp EEEESCCCHHHHHHCTTSSSSHHHHHHHHTCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTTTSTTCCSS
T ss_pred EEEECCCCcchhhhccccccchhHHHHHHHHhccCchhhhHhhccccccCHHHHHHhHHHHHHHHHHHHhhhhccccchh
Confidence 999884321000 0000 000 0 000000 0011112222
Q ss_pred --------cccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 408 --------ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 408 --------~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
...+.+ ++|+|+++|++|..++ .. + ++. +.-...+ +++++++|.+. .+..+.+.+.+.+||
T Consensus 218 ~~~~~~~~~~~l~~-~~P~lii~g~~D~~~~--~~-~-~~~----~~~~~~~-~~~~~~gH~~~-~e~p~~~~~~i~~fl 286 (292)
T 3l80_A 218 LALGEEDFKTGISE-KIPSIVFSESFREKEY--LE-S-EYL----NKHTQTK-LILCGQHHYLH-WSETNSILEKVEQLL 286 (292)
T ss_dssp CCCCGGGGCCCCCT-TSCEEEEECGGGHHHH--HT-S-TTC----CCCTTCE-EEECCSSSCHH-HHCHHHHHHHHHHHH
T ss_pred hhhcchhhhhccCC-CCCEEEEEccCccccc--hH-H-HHh----ccCCCce-eeeCCCCCcch-hhCHHHHHHHHHHHH
Confidence 123344 7999999999999875 44 3 333 3223356 89999999876 366778888999999
Q ss_pred HHh
Q 011049 480 QKY 482 (494)
Q Consensus 480 ~~~ 482 (494)
+++
T Consensus 287 ~~~ 289 (292)
T 3l80_A 287 SNH 289 (292)
T ss_dssp HTC
T ss_pred Hhc
Confidence 865
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=4.1e-13 Score=123.76 Aligned_cols=214 Identities=15% Similarity=0.079 Sum_probs=127.1
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
.+|.++.+... +.+ .. .|.||++||.+.+ ...|. .....| +.+|.|+++|.+ |+
T Consensus 11 ~~g~~l~y~~~-~~G----~~--~p~vvllHG~~~~-----------~~~w~----~~~~~L-~~~~rvia~Dlr---Gh 64 (276)
T 2wj6_A 11 VFDNKLSYIDN-QRD----TD--GPAILLLPGWCHD-----------HRVYK----YLIQEL-DADFRVIVPNWR---GH 64 (276)
T ss_dssp ETTEEEEEEEC-CCC----CS--SCEEEEECCTTCC-----------GGGGH----HHHHHH-TTTSCEEEECCT---TC
T ss_pred eCCeEEEEEEe-cCC----CC--CCeEEEECCCCCc-----------HHHHH----HHHHHH-hcCCEEEEeCCC---CC
Confidence 57877766543 112 11 3789999996521 11232 223344 467999995554 56
Q ss_pred CCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC-CCceeEEEeCCCCCCCCCC----
Q 011049 312 GDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYNKTLT---- 384 (494)
Q Consensus 312 g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~-p~~~~a~v~~~~~~~~~~~---- 384 (494)
|.+... ....+..++|+.+.++.+ + -+++.++||||||.+++.++.++ |++++++|++.+.......
T Consensus 65 G~S~~~~~~~~~~~~a~dl~~ll~~l---~---~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~~~~ 138 (276)
T 2wj6_A 65 GLSPSEVPDFGYQEQVKDALEILDQL---G---VETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAK 138 (276)
T ss_dssp SSSCCCCCCCCHHHHHHHHHHHHHHH---T---CCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh---C---CCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCchHHH
Confidence 666432 223567788888887776 3 26899999999999999999999 9999999988754211000
Q ss_pred -------CCCccc---cccccc----ccH---------------HH-----------HHh-cCccccccCCCCCEEEEec
Q 011049 385 -------PFGFQT---EFRTLW----EAT---------------NV-----------YIE-MSPITHANKIKKPILIIHG 423 (494)
Q Consensus 385 -------~~~~~~---~~~~~~----~~~---------------~~-----------~~~-~sp~~~~~~~~~P~li~~G 423 (494)
...+.. .....| ..+ +. +.. .++...+.++++|+|+++|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~ 218 (276)
T 2wj6_A 139 SLTLLKDPERWREGTHGLFDVWLDGHDEKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHI 218 (276)
T ss_dssp HHHHHHCTTTHHHHHHHHHHHHHTTBCCHHHHHHHHTTTTTCCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEE
T ss_pred HhhhccCcchHHHHHHHHHHHhhcccchHHHHHHHHHHhhhcchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEE
Confidence 000000 000000 000 00 000 1223345678899999887
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 424 EVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 424 ~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
..|...+ .. ....+.+.+.-...+++++|++||... .+..+.+.+.+.+||.+.
T Consensus 219 ~~~~~~~--~~--~~~~~~~~~~~p~a~~~~i~~~gH~~~-~e~P~~~~~~i~~Fl~~~ 272 (276)
T 2wj6_A 219 FSQPTEP--EY--EKINSDFAEQHPWFSYAKLGGPTHFPA-IDVPDRAAVHIREFATAI 272 (276)
T ss_dssp ECCSCSH--HH--HHHHHHHHHHCTTEEEEECCCSSSCHH-HHSHHHHHHHHHHHHHHH
T ss_pred ecCccch--hH--HHHHHHHHhhCCCeEEEEeCCCCCccc-ccCHHHHHHHHHHHHhhc
Confidence 5444321 11 112233333334589999999999866 366788899999999765
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.45 E-value=4.3e-12 Score=122.51 Aligned_cols=118 Identities=16% Similarity=0.054 Sum_probs=80.0
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhC---------CeEEEe
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR---------RFAVLA 302 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------G~~v~~ 302 (494)
.||.+|++....+.+ +..|.||++||.+.+ ...|. .....|++. ||.|++
T Consensus 75 i~g~~i~~~~~~~~~------~~~~plll~HG~~~s-----------~~~~~----~~~~~L~~~~~~~~~~~~~~~vi~ 133 (388)
T 4i19_A 75 IDGATIHFLHVRSPE------PDATPMVITHGWPGT-----------PVEFL----DIIGPLTDPRAHGGDPADAFHLVI 133 (388)
T ss_dssp ETTEEEEEEEECCSS------TTCEEEEEECCTTCC-----------GGGGH----HHHHHHHCGGGGTSCGGGCEEEEE
T ss_pred ECCeEEEEEEccCCC------CCCCeEEEECCCCCC-----------HHHHH----HHHHHHhCcccccCCCCCCeEEEE
Confidence 589999988776653 125789999997522 11221 233455554 999999
Q ss_pred CCCCCCCCCCCCCCCc---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC
Q 011049 303 GPSIPIIGEGDKLPND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 379 (494)
Q Consensus 303 ~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 379 (494)
++.+ |+|.+.... ....+.++++.+.++.+ + .+++.++|||+||.+++.++.++|++++++++.+|..
T Consensus 134 ~dl~---G~G~S~~~~~~~~~~~~~a~~~~~l~~~l---g---~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 204 (388)
T 4i19_A 134 PSLP---GFGLSGPLKSAGWELGRIAMAWSKLMASL---G---YERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQT 204 (388)
T ss_dssp ECCT---TSGGGCCCSSCCCCHHHHHHHHHHHHHHT---T---CSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCC
T ss_pred EcCC---CCCCCCCCCCCCCCHHHHHHHHHHHHHHc---C---CCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCC
Confidence 6654 555543221 22344555555544432 3 3689999999999999999999999999999998653
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.43 E-value=6.6e-12 Score=116.63 Aligned_cols=208 Identities=16% Similarity=0.102 Sum_probs=120.8
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
.+|.++++... + . -|.||++||.+.+ ...|.. .. ...+.+|.|+++|.+ |+
T Consensus 12 ~~~~~~~~~~~---g-----~--g~~~vllHG~~~~-----------~~~w~~----~~-~~l~~~~~vi~~Dl~---G~ 62 (291)
T 3qyj_A 12 TTEARINLVKA---G-----H--GAPLLLLHGYPQT-----------HVMWHK----IA-PLLANNFTVVATDLR---GY 62 (291)
T ss_dssp CSSCEEEEEEE---C-----C--SSEEEEECCTTCC-----------GGGGTT----TH-HHHTTTSEEEEECCT---TS
T ss_pred cCCeEEEEEEc---C-----C--CCeEEEECCCCCC-----------HHHHHH----HH-HHHhCCCEEEEEcCC---CC
Confidence 57778876543 1 1 4678999997522 122321 22 234679999996554 56
Q ss_pred CCCCCCc-------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCC----
Q 011049 312 GDKLPND-------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN---- 380 (494)
Q Consensus 312 g~~~~~~-------~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~---- 380 (494)
|.+.... .......+|+.+.++.+ + .+++.++|||+||.+++.++.++|++++++|++++...
T Consensus 63 G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~---~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~ 136 (291)
T 3qyj_A 63 GDSSRPASVPHHINYSKRVMAQDQVEVMSKL---G---YEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMY 136 (291)
T ss_dssp TTSCCCCCCGGGGGGSHHHHHHHHHHHHHHT---T---CSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHH
T ss_pred CCCCCCCCCccccccCHHHHHHHHHHHHHHc---C---CCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchhh
Confidence 6553321 12344556665554443 3 25799999999999999999999999999998764210
Q ss_pred -CC--------------CCCCCcccc----c-------------cc-ccccH--------------------HHHHhcC-
Q 011049 381 -KT--------------LTPFGFQTE----F-------------RT-LWEAT--------------------NVYIEMS- 406 (494)
Q Consensus 381 -~~--------------~~~~~~~~~----~-------------~~-~~~~~--------------------~~~~~~s- 406 (494)
.. ......... . .. ..-.+ ..|....
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (291)
T 3qyj_A 137 RTTDQEFATAYYHWFFLIQPDNLPETLIGANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFSQPAVIHATCEDYRAAAT 216 (291)
T ss_dssp HTCCHHHHHHTTHHHHTTCSTTHHHHHHHTCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTT
T ss_pred hcchhhhhHHHHHHHHhccCCCchHHHHcCCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHhcCCCcchhHHHHHHcccc
Confidence 00 000000000 0 00 00000 0111100
Q ss_pred ------ccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 407 ------PITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 407 ------p~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
......++++|+|+++|++|...+ .. ...+..++.-..++..+++ +||.+. .++.+.+.+.+.+||.
T Consensus 217 ~~~~~~~~~~~~~i~~P~Lvi~G~~D~~~~--~~---~~~~~~~~~~~~~~~~~~~-~GH~~~-~E~P~~v~~~i~~fL~ 289 (291)
T 3qyj_A 217 IDLEHDELDMKQKISCPVLVLWGEKGIIGR--KY---DVLATWRERAIDVSGQSLP-CGHFLP-EEAPEETYQAIYNFLT 289 (291)
T ss_dssp HHHHHHHTTTTCCBCSCEEEEEETTSSHHH--HS---CHHHHHHTTBSSEEEEEES-SSSCHH-HHSHHHHHHHHHHHHH
T ss_pred cchhhcchhcCCccccceEEEecccccccc--hh---hHHHHHHhhcCCcceeecc-CCCCch-hhCHHHHHHHHHHHHh
Confidence 011246788999999999997432 11 1223333333456777776 799765 5788889999999986
Q ss_pred H
Q 011049 481 K 481 (494)
Q Consensus 481 ~ 481 (494)
+
T Consensus 290 ~ 290 (291)
T 3qyj_A 290 H 290 (291)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.39 E-value=7.4e-12 Score=117.79 Aligned_cols=198 Identities=14% Similarity=0.096 Sum_probs=116.9
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEEeCCCCCCCCCCCCCCC---chhHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEA 330 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~ 330 (494)
.|.||++||++.+. ..|. .....|++ .+|.|+++|.+ |+|.+... ....+..++|+.+
T Consensus 38 ~p~lvllHG~~~~~-----------~~w~----~~~~~L~~~~~~~via~Dl~---GhG~S~~~~~~~~~~~~~a~dl~~ 99 (316)
T 3c5v_A 38 GPVLLLLHGGGHSA-----------LSWA----VFTAAIISRVQCRIVALDLR---SHGETKVKNPEDLSAETMAKDVGN 99 (316)
T ss_dssp SCEEEEECCTTCCG-----------GGGH----HHHHHHHTTBCCEEEEECCT---TSTTCBCSCTTCCCHHHHHHHHHH
T ss_pred CcEEEEECCCCccc-----------ccHH----HHHHHHhhcCCeEEEEecCC---CCCCCCCCCccccCHHHHHHHHHH
Confidence 47899999975211 1132 23335554 28999995554 56665432 2235677889888
Q ss_pred HHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh--CCCceeEEEeCCCCCCCC------------CCCCCcccc-c---
Q 011049 331 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGSYNKT------------LTPFGFQTE-F--- 392 (494)
Q Consensus 331 ~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~--~p~~~~a~v~~~~~~~~~------------~~~~~~~~~-~--- 392 (494)
.++.+... + ++++.|+||||||.+++.+|.+ +|+ ++++|++++..... .....+... .
T Consensus 100 ~l~~l~~~--~-~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (316)
T 3c5v_A 100 VVEAMYGD--L-PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIE 175 (316)
T ss_dssp HHHHHHTT--C-CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCCHHHHHHHHHHHHHHHHHSCSCBSSHHHHHH
T ss_pred HHHHHhcc--C-CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcccccchhhhHHHHHHHHhhCccccccHHHHHH
Confidence 88887421 1 2689999999999999999985 576 88888876431000 000000000 0
Q ss_pred ----cccccc--------HHHHH-------------------hcCc--------------cccccCCCCCEEEEecCCCC
Q 011049 393 ----RTLWEA--------TNVYI-------------------EMSP--------------ITHANKIKKPILIIHGEVDD 427 (494)
Q Consensus 393 ----~~~~~~--------~~~~~-------------------~~sp--------------~~~~~~~~~P~li~~G~~D~ 427 (494)
...... +.... .... ...+.++++|+|+++|++|.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lli~g~~D~ 255 (316)
T 3c5v_A 176 WSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLLLAGVDR 255 (316)
T ss_dssp HHHHTTSCCCHHHHHHHHHHHEEECC------------CEEESCCGGGGHHHHHHHHTTHHHHHHHSSSCEEEEESSCCC
T ss_pred HhhhcccccchhhhhhhhhHHhhhccccccccccccccceeeeecccchhhhhhhhhhhhHHHhhcCCCCEEEEEecccc
Confidence 000000 00000 0000 01123578999999999998
Q ss_pred CCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 428 KVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 428 ~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
..+ ... ...+. ...++++++++||... .+..+.+.+.+.+||.+.-.
T Consensus 256 ~~~---~~~---~~~~~---~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~~~ 302 (316)
T 3c5v_A 256 LDK---DLT---IGQMQ---GKFQMQVLPQCGHAVH-EDAPDKVAEAVATFLIRHRF 302 (316)
T ss_dssp CCH---HHH---HHHHT---TCSEEEECCCCSSCHH-HHSHHHHHHHHHHHHHHTTS
T ss_pred ccc---HHH---HHhhC---CceeEEEcCCCCCccc-ccCHHHHHHHHHHHHHhccc
Confidence 642 211 12222 2368999999999876 36677888999999987543
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.39 E-value=3.9e-12 Score=115.50 Aligned_cols=156 Identities=15% Similarity=0.040 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC-----ceeEEEeCCCCCCCCCCC---CCccccc
Q 011049 321 VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-----LFCCGIARSGSYNKTLTP---FGFQTEF 392 (494)
Q Consensus 321 ~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~-----~~~a~v~~~~~~~~~~~~---~~~~~~~ 392 (494)
.....+|+.++++.+.++..+ +++.++||||||.+++.++.++|+ +++.+|++++.++..... ..+.. .
T Consensus 73 ~~~~a~~l~~~i~~l~~~~~~--~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~-~ 149 (254)
T 3ds8_A 73 PDDWSKWLKIAMEDLKSRYGF--TQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNGMDLSF-K 149 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHCSCTTC-S
T ss_pred HHHHHHHHHHHHHHHHHHhCC--CceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCccccccccccccc-c
Confidence 466688888888888776322 689999999999999999999998 899999999876532100 00000 0
Q ss_pred ccccccHHHHHhcC-ccccccCCCCCEEEEecC------CCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCC--CCCccC
Q 011049 393 RTLWEATNVYIEMS-PITHANKIKKPILIIHGE------VDDKVGLFPMQAERFFDALKGHGALSRLVLLPF--EHHVYA 463 (494)
Q Consensus 393 ~~~~~~~~~~~~~s-p~~~~~~~~~P~li~~G~------~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~--~~H~~~ 463 (494)
..+-. ...+.... ....+.+ ++|+|.|+|. .|..|| ...++.+...+......++..++.+ ++|...
T Consensus 150 ~~p~~-~~~~~~~~~~~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp--~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l 225 (254)
T 3ds8_A 150 KLPNS-TPQMDYFIKNQTEVSP-DLEVLAIAGELSEDNPTDGIVP--TISSLATRLFMPGSAKAYIEDIQVGEDAVHQTL 225 (254)
T ss_dssp SCSSC-CHHHHHHHHTGGGSCT-TCEEEEEEEESBTTBCBCSSSB--HHHHTGGGGTSBTTBSEEEEEEEESGGGCGGGG
T ss_pred cCCcc-hHHHHHHHHHHhhCCC-CcEEEEEEecCCCCCCCCcEee--HHHHHHHHHHhhccCcceEEEEEeCCCCchhcc
Confidence 00000 11111110 0112222 6899999999 999998 8888777777766555566666666 669765
Q ss_pred CcccHHHHHHHHHHHHHHhcCC
Q 011049 464 ARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 464 ~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
. ++. ++.+.+..||.++...
T Consensus 226 ~-~~~-~v~~~i~~fL~~~~~~ 245 (254)
T 3ds8_A 226 H-ETP-KSIEKTYWFLEKFKTD 245 (254)
T ss_dssp G-GSH-HHHHHHHHHHHTCCCS
T ss_pred c-CCH-HHHHHHHHHHHHhcCC
Confidence 3 333 5888899999887554
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.38 E-value=1e-11 Score=116.75 Aligned_cols=203 Identities=16% Similarity=0.072 Sum_probs=118.7
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 334 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~ 334 (494)
.|.||++||.... ++...|. .....| ..||.|+.++.+ |+|.+..........++++.+.++.
T Consensus 81 ~~~lv~lhG~~~~---------~~~~~~~----~~~~~L-~~~~~v~~~d~~---G~G~~~~~~~~~~~~~~~~~~~l~~ 143 (319)
T 3lcr_A 81 GPQLILVCPTVMT---------TGPQVYS----RLAEEL-DAGRRVSALVPP---GFHGGQALPATLTVLVRSLADVVQA 143 (319)
T ss_dssp SCEEEEECCSSTT---------CSGGGGH----HHHHHH-CTTSEEEEEECT---TSSTTCCEESSHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCcC---------CCHHHHH----HHHHHh-CCCceEEEeeCC---CCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 5889999993100 1111121 233334 789999995554 5555444333445566666666554
Q ss_pred HHHcCCCCCCcEEEEecChHHHHHHHHHHhC---CCceeEEEeCCCCCCCCCC-CC-Cccccc-ccccc--------c--
Q 011049 335 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---PHLFCCGIARSGSYNKTLT-PF-GFQTEF-RTLWE--------A-- 398 (494)
Q Consensus 335 l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~---p~~~~a~v~~~~~~~~~~~-~~-~~~~~~-~~~~~--------~-- 398 (494)
+. ...++.++|||+||.+++.++.+. |++++++|.+.+....... .. .+.... ..... .
T Consensus 144 ~~-----~~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (319)
T 3lcr_A 144 EV-----ADGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGGRPEELFRSALNERFVEYLRLTGGGNL 218 (319)
T ss_dssp HH-----TTSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_pred hc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccchhhHHHHHHHHHHHHhhhhcccCCCch
Confidence 42 226799999999999999999887 8889999988765321110 00 000000 00000 0
Q ss_pred H------HHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCc-ccHHHH
Q 011049 399 T------NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR-ENVMHV 471 (494)
Q Consensus 399 ~------~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~-~~~~~~ 471 (494)
. ..+...-......++++|+|+++|++| .++ ......+.+.+.. ..+++++++ +|..... +....+
T Consensus 219 ~~~l~~~~~~~~~~~~~~~~~i~~PvLli~g~~~-~~~--~~~~~~~~~~~~~---~~~~~~~~g-~H~~~~~~~~~~~v 291 (319)
T 3lcr_A 219 SQRITAQVWCLELLRGWRPEGLTAPTLYVRPAQP-LVE--QEKPEWRGDVLAA---MGQVVEAPG-DHFTIIEGEHVAST 291 (319)
T ss_dssp HHHHHHHHHHHHHTTTCCCCCCSSCEEEEEESSC-SSS--CCCTHHHHHHHHT---CSEEEEESS-CTTGGGSTTTHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCCCcCCCEEEEEeCCC-CCC--cccchhhhhcCCC---CceEEEeCC-CcHHhhCcccHHHH
Confidence 0 001111111123578899999999984 444 4556666666653 357788887 5654433 577889
Q ss_pred HHHHHHHHHHhcCCC
Q 011049 472 IWETDRWLQKYCLSN 486 (494)
Q Consensus 472 ~~~~~~fl~~~l~~~ 486 (494)
.+.+.+||.+.....
T Consensus 292 a~~i~~fL~~~~~~~ 306 (319)
T 3lcr_A 292 AHIVGDWLREAHAHY 306 (319)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred HHHHHHHHHhccccc
Confidence 999999999876543
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.38 E-value=5.5e-12 Score=117.70 Aligned_cols=200 Identities=19% Similarity=0.115 Sum_probs=113.1
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 334 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~ 334 (494)
.|.||++||.+... ++..|. ... .....+|.|+.++. .|+|.+.......+..++++...
T Consensus 67 ~~~lvllhG~~~~~---------~~~~~~----~~~-~~l~~~~~v~~~d~---~G~G~s~~~~~~~~~~a~~~~~~--- 126 (300)
T 1kez_A 67 EVTVICCAGTAAIS---------GPHEFT----RLA-GALRGIAPVRAVPQ---PGYEEGEPLPSSMAAVAAVQADA--- 126 (300)
T ss_dssp SSEEEECCCSSTTC---------STTTTH----HHH-HHTSSSCCBCCCCC---TTSSTTCCBCSSHHHHHHHHHHH---
T ss_pred CCeEEEECCCcccC---------cHHHHH----HHH-HhcCCCceEEEecC---CCCCCCCCCCCCHHHHHHHHHHH---
Confidence 68899999965211 001121 122 22346799988554 45655543333345555554433
Q ss_pred HHHcCCCCCCcEEEEecChHHHHHHHHHHhCC---CceeEEEeCCCCCCCCCCC----------CCcccccccc--c--c
Q 011049 335 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP---HLFCCGIARSGSYNKTLTP----------FGFQTEFRTL--W--E 397 (494)
Q Consensus 335 l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p---~~~~a~v~~~~~~~~~~~~----------~~~~~~~~~~--~--~ 397 (494)
+.+. .+.+++.++|||+||.+++.++.++| ++++++|++++........ ..+....... . .
T Consensus 127 l~~~--~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (300)
T 1kez_A 127 VIRT--QGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTRLT 204 (300)
T ss_dssp HHHH--CSSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHHHHHHHHHHHGGGCCCCSSCCCHHHHH
T ss_pred HHHh--cCCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhHHHHHHHHHHHHHHhCcCCccchHHHH
Confidence 3332 23468999999999999999999987 4899999988754321100 0000000000 0 0
Q ss_pred cHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhC-CCcEEEEEcCCCCCccCCcccHHHHHHHHH
Q 011049 398 ATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGH-GALSRLVLLPFEHHVYAARENVMHVIWETD 476 (494)
Q Consensus 398 ~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~-g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 476 (494)
....+...-......++++|+|+++|+ |..++ +.. . .+.+. ..+++++++++ +|.....+....+.+.+.
T Consensus 205 ~~~~~~~~~~~~~~~~i~~P~lii~G~-d~~~~--~~~-~----~~~~~~~~~~~~~~i~g-gH~~~~~e~~~~~~~~i~ 275 (300)
T 1kez_A 205 ALGAYDRLTGQWRPRETGLPTLLVSAG-EPMGP--WPD-D----SWKPTWPFEHDTVAVPG-DHFTMVQEHADAIARHID 275 (300)
T ss_dssp HHHHHHHHTTTCCCCCCSCCBEEEEES-SCSSC--CCS-S----CCSCCCSSCCEEEEESS-CTTTSSSSCSHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCCCCEEEEEeC-CCCCC--Ccc-c----chhhhcCCCCeEEEecC-CChhhccccHHHHHHHHH
Confidence 001111111111346788999999995 55654 332 1 12222 23478999999 998764466778888899
Q ss_pred HHHHHhcCC
Q 011049 477 RWLQKYCLS 485 (494)
Q Consensus 477 ~fl~~~l~~ 485 (494)
+||.+....
T Consensus 276 ~fl~~~~~~ 284 (300)
T 1kez_A 276 AWLGGGNSS 284 (300)
T ss_dssp HHHTCC---
T ss_pred HHHHhccCC
Confidence 999876543
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.37 E-value=2.1e-11 Score=109.37 Aligned_cols=152 Identities=15% Similarity=0.113 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC-----ceeEEEeCCCCCCCCCC---CCC--cccc
Q 011049 322 EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-----LFCCGIARSGSYNKTLT---PFG--FQTE 391 (494)
Q Consensus 322 ~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~-----~~~a~v~~~~~~~~~~~---~~~--~~~~ 391 (494)
....+++.++++++.++.. .+++.++||||||.+++.++.++|+ +++.+|.+++.++-... ... ....
T Consensus 77 ~~~~~~l~~~i~~l~~~~~--~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~~ 154 (249)
T 3fle_A 77 KENAYWIKEVLSQLKSQFG--IQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNENVNEIIVDK 154 (249)
T ss_dssp HHHHHHHHHHHHHHHHTTC--CCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSCTTTSCBCT
T ss_pred HHHHHHHHHHHHHHHHHhC--CCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCCcchhhhcc
Confidence 3457788888888887643 3689999999999999999999874 78999998876653210 000 0001
Q ss_pred cccccccHHHHHhcC-ccccccCCCCCEEEEecC------CCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCC--CCCcc
Q 011049 392 FRTLWEATNVYIEMS-PITHANKIKKPILIIHGE------VDDKVGLFPMQAERFFDALKGHGALSRLVLLPF--EHHVY 462 (494)
Q Consensus 392 ~~~~~~~~~~~~~~s-p~~~~~~~~~P~li~~G~------~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~--~~H~~ 462 (494)
.+.+......|...- -...+.+.++|+|.|+|+ .|..|| ...++.+...++......+.+++.| +.|..
T Consensus 155 ~g~p~~~~~~~~~l~~~~~~~p~~~~~vl~I~G~~~~~~~sDG~V~--~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~ 232 (249)
T 3fle_A 155 QGKPSRMNAAYRQLLSLYKIYCGKEIEVLNIYGDLEDGSHSDGRVS--NSSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQ 232 (249)
T ss_dssp TCCBSSCCHHHHHTGGGHHHHTTTTCEEEEEEEECCSSSCBSSSSB--HHHHHTHHHHSTTCSSEEEEEEEESGGGSTGG
T ss_pred cCCCcccCHHHHHHHHHHhhCCccCCeEEEEeccCCCCCCCCCccc--HHHHHHHHHHHhhCCCceEEEEEeCCCCchhc
Confidence 111222223333321 122334457899999998 699998 8888877777777777777777866 88986
Q ss_pred CCcccHHHHHHHHHHHH
Q 011049 463 AARENVMHVIWETDRWL 479 (494)
Q Consensus 463 ~~~~~~~~~~~~~~~fl 479 (494)
.. ++ ..+.+.+.+||
T Consensus 233 l~-~n-~~V~~~I~~FL 247 (249)
T 3fle_A 233 LH-EN-KDVANEIIQFL 247 (249)
T ss_dssp GG-GC-HHHHHHHHHHH
T ss_pred cc-cC-HHHHHHHHHHh
Confidence 63 33 37777888887
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=99.37 E-value=6.2e-13 Score=132.93 Aligned_cols=215 Identities=16% Similarity=0.075 Sum_probs=128.1
Q ss_pred cCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHH-HhCCeEEEeCCCCC-C
Q 011049 231 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF-LARRFAVLAGPSIP-I 308 (494)
Q Consensus 231 ~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~G~~v~~~~~~~-~ 308 (494)
+.|. +...+|.|.+..+. .++|+||++|||+|..++. ..+.. ..... ..+|++|+.++||- .
T Consensus 82 ~edc--l~l~v~~P~~~~~~--~~~Pviv~iHGGg~~~g~~--------~~~~~----~~~~~~~~~g~vvv~~nYRlg~ 145 (522)
T 1ukc_A 82 SEDC--LFINVFKPSTATSQ--SKLPVWLFIQGGGYAENSN--------ANYNG----TQVIQASDDVIVFVTFNYRVGA 145 (522)
T ss_dssp ESCC--CEEEEEEETTCCTT--CCEEEEEEECCSTTTSCCS--------CSCCC----HHHHHHTTSCCEEEEECCCCHH
T ss_pred CCcC--CEEEEEECCCCCCC--CCCCEEEEECCCccccCCc--------cccCc----HHHHHhcCCcEEEEEecccccc
Confidence 3454 56678889764332 2489999999998765432 11221 11111 25699999999873 3
Q ss_pred CCCCCCCCCc--hhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEecChHHHHHHHHHHhC----CCceeEEEeCCCCC
Q 011049 309 IGEGDKLPND--RFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA----PHLFCCGIARSGSY 379 (494)
Q Consensus 309 ~g~g~~~~~~--~~~~~~~~d~~~~v~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~~~----p~~~~a~v~~~~~~ 379 (494)
.|++...... ...+..+.|+.++++|+.++. ..|++||.|+|+|+||+++..++... +.+|+++|+.+|..
T Consensus 146 ~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~ 225 (522)
T 1ukc_A 146 LGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 225 (522)
T ss_dssp HHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred cccccchhccccCCCChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCc
Confidence 3443321100 012456889999999998862 36999999999999999887776653 57899999999975
Q ss_pred CCCCCCCCccc-------ccc-c-ccccHHHHHhcCcccc---------ccCCCCC--EEEEecCCCCCCCCCHHHHHHH
Q 011049 380 NKTLTPFGFQT-------EFR-T-LWEATNVYIEMSPITH---------ANKIKKP--ILIIHGEVDDKVGLFPMQAERF 439 (494)
Q Consensus 380 ~~~~~~~~~~~-------~~~-~-~~~~~~~~~~~sp~~~---------~~~~~~P--~li~~G~~D~~v~~~~~~~~~~ 439 (494)
........... ..+ . .-+..+-++..++... ......| .+.++...|..+. +.+..++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~gc~~~~~~~~~Lr~~~~~~l~~a~~~~~~~~~~~~~~~~~~f~Pv~D~~~l--~~~p~~~ 303 (522)
T 1ukc_A 226 PTQRTVSEMEFQFERFVNDTGCSSARDSLECLREQDIATIQKGNTGSPFPGGSSSPLPDWYFLPVTDGSLV--PDELYNA 303 (522)
T ss_dssp CCCCCSGGGHHHHHHHHHHTTCTTCSSHHHHHHHSCHHHHHHHSSCCCCTTCCSSSCCSCCSCCCCCSSSS--CSCHHHH
T ss_pred CCcCCHHHHHHHHHHHHHHcCCCCHHHHHHHHHcCCHHHHHHHHHhccccccccCcccccccccccCCccc--CCCHHHH
Confidence 42211100000 000 0 0001111222222111 1112233 5566777787664 5667777
Q ss_pred HHHHHhCCCcEEEEEcCCCCCccC
Q 011049 440 FDALKGHGALSRLVLLPFEHHVYA 463 (494)
Q Consensus 440 ~~~l~~~g~~~~~~~~~~~~H~~~ 463 (494)
.+.-+..++++-+-...+++|.+.
T Consensus 304 ~~~g~~~~vp~l~G~~~~Eg~~f~ 327 (522)
T 1ukc_A 304 FDAGNFIKVPVLVGDDTDEGSNFA 327 (522)
T ss_dssp HHHTCSCCCCEEEEEETBGGGGTS
T ss_pred HhcCCCCCCCEEEEeecchhHHhh
Confidence 776666678888888899999875
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.36 E-value=9.9e-12 Score=121.62 Aligned_cols=150 Identities=11% Similarity=0.069 Sum_probs=109.8
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
..||++|+ ++++.++++........++|||||+.|+|+...++ ..+||++++.++ +.++++...... ..
T Consensus 203 ~~i~~~d~---~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g-~~~i~~~d~~~~--~~~~l~~~~~~~-----~~ 271 (415)
T 2hqs_A 203 SALVIQTL---ANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTG-SLNLYVMDLASG--QIRQVTDGRSNN-----TE 271 (415)
T ss_dssp CEEEEEET---TTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTS-SCEEEEEETTTC--CEEECCCCSSCE-----EE
T ss_pred cEEEEEEC---CCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCC-CceEEEEECCCC--CEEeCcCCCCcc-----cc
Confidence 48999999 88888888877767778999999999999876555 578999999987 667776544322 22
Q ss_pred CceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccccc
Q 011049 98 PMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDIN 177 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s 177 (494)
+ .|||||++|++.+.. ....+|+++|+++++.+++...... .....||
T Consensus 272 ~--~~spdg~~l~~~s~~------------------~g~~~i~~~d~~~~~~~~l~~~~~~------------~~~~~~s 319 (415)
T 2hqs_A 272 P--TWFPDSQNLAFTSDQ------------------AGRPQVYKVNINGGAPQRITWEGSQ------------NQDADVS 319 (415)
T ss_dssp E--EECTTSSEEEEEECT------------------TSSCEEEEEETTSSCCEECCCSSSE------------EEEEEEC
T ss_pred e--EECCCCCEEEEEECC------------------CCCcEEEEEECCCCCEEEEecCCCc------------ccCeEEC
Confidence 3 399999999998631 1234699999999876665433211 0134899
Q ss_pred ccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 178 LNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 178 ~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
|||+.+++.... .....|+++++++++.+.++.
T Consensus 320 pdG~~l~~~~~~-~g~~~i~~~d~~~~~~~~l~~ 352 (415)
T 2hqs_A 320 SDGKFMVMVSSN-GGQQHIAKQDLATGGVQVLSS 352 (415)
T ss_dssp TTSSEEEEEEEC-SSCEEEEEEETTTCCEEECCC
T ss_pred CCCCEEEEEECc-CCceEEEEEECCCCCEEEecC
Confidence 999988876653 224579999999888766653
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.36 E-value=1.3e-11 Score=120.69 Aligned_cols=149 Identities=14% Similarity=0.144 Sum_probs=110.1
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
+.|+++|+ +++..+.++........|+|||||+.|+|.+..++ ...|++.++.++ +.+.++...... ..
T Consensus 159 ~~i~i~d~---~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~-~~~i~~~d~~tg--~~~~l~~~~~~~-----~~ 227 (415)
T 2hqs_A 159 YELRVSDY---DGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESG-RSALVIQTLANG--AVRQVASFPRHN-----GA 227 (415)
T ss_dssp EEEEEEET---TSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTS-SCEEEEEETTTC--CEEEEECCSSCE-----EE
T ss_pred ceEEEEcC---CCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCC-CcEEEEEECCCC--cEEEeecCCCcc-----cC
Confidence 79999999 78888889887777889999999999999886544 578999999987 667766544322 23
Q ss_pred CceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccccc
Q 011049 98 PMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDIN 177 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s 177 (494)
+. |||||++|+|.... .....|+++|+++++.+++....+. .....|+
T Consensus 228 ~~--~spdg~~la~~~~~------------------~g~~~i~~~d~~~~~~~~l~~~~~~------------~~~~~~s 275 (415)
T 2hqs_A 228 PA--FSPDGSKLAFALSK------------------TGSLNLYVMDLASGQIRQVTDGRSN------------NTEPTWF 275 (415)
T ss_dssp EE--ECTTSSEEEEEECT------------------TSSCEEEEEETTTCCEEECCCCSSC------------EEEEEEC
T ss_pred EE--EcCCCCEEEEEEec------------------CCCceEEEEECCCCCEEeCcCCCCc------------ccceEEC
Confidence 33 99999999988631 1123599999999887666543321 1234899
Q ss_pred ccCcEEEEEEecCCCCCeEEEEEcCCCceeEee
Q 011049 178 LNQLKILTSKESKTEITQYHILSWPLKKSSQIT 210 (494)
Q Consensus 178 ~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt 210 (494)
|||+.+++.... .....||++++.+++.++++
T Consensus 276 pdg~~l~~~s~~-~g~~~i~~~d~~~~~~~~l~ 307 (415)
T 2hqs_A 276 PDSQNLAFTSDQ-AGRPQVYKVNINGGAPQRIT 307 (415)
T ss_dssp TTSSEEEEEECT-TSSCEEEEEETTSSCCEECC
T ss_pred CCCCEEEEEECC-CCCcEEEEEECCCCCEEEEe
Confidence 999988887642 33458999999887766554
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.35 E-value=2.2e-11 Score=128.47 Aligned_cols=187 Identities=9% Similarity=0.036 Sum_probs=118.4
Q ss_pred CCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccc-c
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV-Y 92 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~-~ 92 (494)
.++.+++|++|+ ++++.++|+........|+|||||++|+|++ ..+||+++++++ +.++||.....+. +
T Consensus 88 ~~~~~~~~~~d~---~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~-----~~~i~~~~~~~~--~~~~lt~~g~~~~~~ 157 (740)
T 4a5s_A 88 HSYTASYDIYDL---NKRQLITEERIPNNTQWVTWSPVGHKLAYVW-----NNDIYVKIEPNL--PSYRITWTGKEDIIY 157 (740)
T ss_dssp SCEEEEEEEEET---TTTEECCSSCCCTTEEEEEECSSTTCEEEEE-----TTEEEEESSTTS--CCEECCSCCBTTTEE
T ss_pred EccceEEEEEEC---CCCcEEEcccCCCcceeeEECCCCCEEEEEE-----CCeEEEEECCCC--ceEEEcCCCCcccee
Confidence 344578999999 8898889988777788999999999999985 357999999988 7788876433210 0
Q ss_pred CC-----------CCCCceeeCCCCCEEEEEEeccCccc-----------------eEEEEccCCCCCCCCCCceEeeec
Q 011049 93 SD-----------PGSPMMTRTSTGTNVIAKIKKENDEQ-----------------IYILLNGRGFTPEGNIPFLDLFDI 144 (494)
Q Consensus 93 ~~-----------~~~~~~~~spDG~~i~~~~~~~~~~~-----------------~~~~~~~~g~~~~~~~~~l~~~d~ 144 (494)
.+ .....+.|||||++|+|.+....... ..+.|...|.. .....|+++|+
T Consensus 158 ~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~--~~~~~l~v~d~ 235 (740)
T 4a5s_A 158 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAV--NPTVKFFVVNT 235 (740)
T ss_dssp ESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSC--CCEEEEEEEET
T ss_pred cCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCc--CCeeEEEEEEC
Confidence 00 01112349999999999874322111 11222233321 11235888898
Q ss_pred CC---C---ceEEE-----------------EeeCcc-hhhh-----h--eeee---------------c----c-C---
Q 011049 145 NT---G---SKERI-----------------WESNRE-KYFE-----T--AVAL---------------V----F-G--- 170 (494)
Q Consensus 145 ~~---g---~~~~l-----------------~~~~~~-~~~~-----~--~~~~---------------~----s-~--- 170 (494)
++ + +..++ |.+++. +.+. . .+.+ . . .
T Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~ 315 (740)
T 4a5s_A 236 DSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGW 315 (740)
T ss_dssp TSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSC
T ss_pred CCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCce
Confidence 88 7 33332 555554 1110 0 0000 0 0 0
Q ss_pred -----CCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecC
Q 011049 171 -----QGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNF 212 (494)
Q Consensus 171 -----~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~ 212 (494)
...+.|||||+.+++..+....-..||+++.++++.++||.-
T Consensus 316 v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g 362 (740)
T 4a5s_A 316 VGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKG 362 (740)
T ss_dssp SSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCS
T ss_pred EccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccC
Confidence 114688999998885555445567899999998888888754
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.35 E-value=6.7e-12 Score=121.53 Aligned_cols=166 Identities=7% Similarity=-0.005 Sum_probs=112.6
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecC-CCceEEEEeeeec--cceEEEEEcCCCCCCCceEeeeccccccc
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCD-DSLALVNETWYKT--SQTRTWLVCPGSKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wsp-Dg~~i~f~~~~~~--~~~~~~~~~~~~g~~~~~~lt~~~~~~~~ 92 (494)
....||++|+ ++++.++++........++||| ||+.|+|.+.... ...+||+++++++ +.++++........
T Consensus 166 ~~~~l~~~d~---~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~~~~~~~ 240 (388)
T 3pe7_A 166 PCCRLMRVDL---KTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT--NMRKVKTHAEGESC 240 (388)
T ss_dssp CCEEEEEEET---TTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC--CCEESCCCCTTEEE
T ss_pred CcceEEEEEC---CCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC--ceEEeeeCCCCccc
Confidence 4578999999 8889999988877778899999 9999999886321 1458999999987 77888765421100
Q ss_pred CCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCC
Q 011049 93 SDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQG 172 (494)
Q Consensus 93 ~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~ 172 (494)
..|. |||||++|+|.+... + .....|+++|+++|+.+.+....+. ........
T Consensus 241 ---~~~~--~spdg~~l~~~~~~~------------~----~~~~~l~~~d~~~g~~~~l~~~~~~------~~~~~~~~ 293 (388)
T 3pe7_A 241 ---THEF--WVPDGSALVYVSYLK------------G----SPDRFIYSADPETLENRQLTSMPAC------SHLMSNYD 293 (388)
T ss_dssp ---EEEE--ECTTSSCEEEEEEET------------T----CCCEEEEEECTTTCCEEEEEEECCE------EEEEECTT
T ss_pred ---ccce--ECCCCCEEEEEecCC------------C----CCcceEEEEecCCCceEEEEcCCCc------eeeeecCC
Confidence 2233 999999999987421 1 1112499999999988777664431 00001011
Q ss_pred cccccccCcEEEEEEec-----CCCCCeEEEEEcCCCceeEeecCC
Q 011049 173 EEDINLNQLKILTSKES-----KTEITQYHILSWPLKKSSQITNFP 213 (494)
Q Consensus 173 ~~~~s~d~~~~~~~~~s-----~~~p~~l~~~~~~~~~~~~lt~~~ 213 (494)
...|+|||+.+++.... ......||++++++++.++|+...
T Consensus 294 ~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~ 339 (388)
T 3pe7_A 294 GSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHD 339 (388)
T ss_dssp SSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECC
T ss_pred CCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEecccc
Confidence 23699999988876532 134568999999998888887654
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.29 E-value=2.1e-11 Score=111.55 Aligned_cols=198 Identities=14% Similarity=0.058 Sum_probs=111.3
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 334 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~ 334 (494)
.|.||++||++. +...|..+. . ...+|.|+.++.+| ++.+.......+..++++.+.++.
T Consensus 21 ~~~lv~lhg~~~-----------~~~~~~~~~----~--l~~~~~v~~~d~~G---~~~~~~~~~~~~~~~~~~~~~i~~ 80 (265)
T 3ils_A 21 RKTLFMLPDGGG-----------SAFSYASLP----R--LKSDTAVVGLNCPY---ARDPENMNCTHGAMIESFCNEIRR 80 (265)
T ss_dssp SEEEEEECCTTC-----------CGGGGTTSC----C--CSSSEEEEEEECTT---TTCGGGCCCCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCC-----------CHHHHHHHH----h--cCCCCEEEEEECCC---CCCCCCCCCCHHHHHHHHHHHHHH
Confidence 578999999752 222243322 2 36889999966654 333322223345566666666554
Q ss_pred HHHcCCCCCCcEEEEecChHHHHHHHHHH---hCCCceeEEEeCCCCCCCCCCCCC--------------c-------cc
Q 011049 335 VVRRGVADPSRIAVGGHSYGAFMTAHLLA---HAPHLFCCGIARSGSYNKTLTPFG--------------F-------QT 390 (494)
Q Consensus 335 l~~~~~~d~~ri~i~G~S~GG~~a~~~~~---~~p~~~~a~v~~~~~~~~~~~~~~--------------~-------~~ 390 (494)
+ . ...++.++|||+||.+++.++. .+|++++.+|..++.......... . ..
T Consensus 81 ~---~--~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (265)
T 3ils_A 81 R---Q--PRGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFYEHCNSIGLFATQPGASPDGS 155 (265)
T ss_dssp H---C--SSCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCCCHHHHHHHHHTTTTTTSSSSCSSSC
T ss_pred h---C--CCCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcccccCHHHHHHHHHHHHhCCCccccccCC
Confidence 4 1 2257999999999999999998 677889998887654321111100 0 00
Q ss_pred cccccccc---HHHHHhcCc--cccccCCCCCEE-EEecCC---CCCCCC------------CHHHHHHHHHHHHhCCCc
Q 011049 391 EFRTLWEA---TNVYIEMSP--ITHANKIKKPIL-IIHGEV---DDKVGL------------FPMQAERFFDALKGHGAL 449 (494)
Q Consensus 391 ~~~~~~~~---~~~~~~~sp--~~~~~~~~~P~l-i~~G~~---D~~v~~------------~~~~~~~~~~~l~~~g~~ 449 (494)
.....|-. ...+....- .....++++|++ +++|++ |..++. +......+.+.+. +.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~--~~~ 233 (265)
T 3ils_A 156 TEPPSYLIPHFTAVVDVMLDYKLAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMP--GAS 233 (265)
T ss_dssp SCCCTTHHHHHHHHHHHTTTCCCCCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHST--TCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHHhCC--ccc
Confidence 00000100 011111111 112346789977 999999 987620 0222222222221 136
Q ss_pred EEEEEcCCCCCccCC-cccHHHHHHHHHHHH
Q 011049 450 SRLVLLPFEHHVYAA-RENVMHVIWETDRWL 479 (494)
Q Consensus 450 ~~~~~~~~~~H~~~~-~~~~~~~~~~~~~fl 479 (494)
++++++++++|.+.. .+....+.+.+.+||
T Consensus 234 ~~~~~i~gagH~~~~~~e~~~~v~~~i~~fL 264 (265)
T 3ils_A 234 FDIVRADGANHFTLMQKEHVSIISDLIDRVM 264 (265)
T ss_dssp EEEEEEEEEETTGGGSTTTTHHHHHHHHHHT
T ss_pred eeEEEcCCCCcceeeChhhHHHHHHHHHHHh
Confidence 899999999998652 355556666666665
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.29 E-value=4e-11 Score=116.00 Aligned_cols=169 Identities=12% Similarity=0.072 Sum_probs=111.2
Q ss_pred eeeeccCCCCCCCCCeeccccccccc-----cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 19 IIYTQPAEPAEGEKPEILHKLDLRFR-----SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~~~~~~~-----~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
++|+... .++..++||....... .|+|||||++|+|.+..++ ..+||+++++++ +.++++.......
T Consensus 12 ~~~~~~~---~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g-~~~l~~~d~~~g--~~~~lt~~~~~~~-- 83 (388)
T 3pe7_A 12 DTYQDAS---TGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDG-PWNYYLLDLNTQ--VATQLTEGRGDNT-- 83 (388)
T ss_dssp EEEECTT---TCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTS-SCEEEEEETTTC--EEEECCCSSCBCS--
T ss_pred eEEecCC---CCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCC-CceEEEEeCCCC--ceEEeeeCCCCCc--
Confidence 6777665 7778889997764333 4999999999999987555 568999999988 8888887654321
Q ss_pred CCCCCceeeCCCCCEEEEEEeccC--------ccceEE-------------EEccCCCCC--------------------
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKEN--------DEQIYI-------------LLNGRGFTP-------------------- 132 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~--------~~~~~~-------------~~~~~g~~~-------------------- 132 (494)
..+. |||||++|+|...... .+...+ ..+.+|...
T Consensus 84 --~~~~--~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~ 159 (388)
T 3pe7_A 84 --FGGF--LSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFH 159 (388)
T ss_dssp --SSCE--ECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHH
T ss_pred --cceE--EcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhh
Confidence 1334 9999999999874210 000100 112222100
Q ss_pred ----CCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccc-cCcEEEEEEecCCC--CCeEEEEEcCCCc
Q 011049 133 ----EGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINL-NQLKILTSKESKTE--ITQYHILSWPLKK 205 (494)
Q Consensus 133 ----~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~-d~~~~~~~~~s~~~--p~~l~~~~~~~~~ 205 (494)
......|+++|+++|+.+.+...... .....||| ||+++++....... ...||+++.++++
T Consensus 160 ~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~------------~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~ 227 (388)
T 3pe7_A 160 EFYFTKPCCRLMRVDLKTGESTVILQENQW------------LGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN 227 (388)
T ss_dssp HHGGGCCCEEEEEEETTTCCEEEEEEESSC------------EEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC
T ss_pred hhhccCCcceEEEEECCCCceEEeecCCcc------------ccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc
Confidence 01124588888888877777654421 02348999 99999887764322 3479999988877
Q ss_pred eeEeec
Q 011049 206 SSQITN 211 (494)
Q Consensus 206 ~~~lt~ 211 (494)
.+.++.
T Consensus 228 ~~~l~~ 233 (388)
T 3pe7_A 228 MRKVKT 233 (388)
T ss_dssp CEESCC
T ss_pred eEEeee
Confidence 776654
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.28 E-value=4.2e-11 Score=113.99 Aligned_cols=160 Identities=8% Similarity=0.004 Sum_probs=102.9
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeec-cceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT-SQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~-~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
+.+.||++++ +++++++| .....|+|||||+.|+|.+.... ...+||+++++++ +.++++.... .
T Consensus 41 ~~~~l~~~d~---~~~~~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g--~~~~l~~~~~-~---- 106 (347)
T 2gop_A 41 YENTIVIENL---KNNARRFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETL--SSKKILEAKN-I---- 106 (347)
T ss_dssp EEEEEEEEET---TTCCEEEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTT--EEEEEEEESE-E----
T ss_pred ccceEEEEeC---CCCceEEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCC--ceEEEEcCCC-c----
Confidence 5679999999 88888777 34567999999999999987541 2578999999987 7788877553 2
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccce-----EEEEccCCCCC-CCCCCceEeeecCCCce-EEEEeeCcchhhhheeee
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQI-----YILLNGRGFTP-EGNIPFLDLFDINTGSK-ERIWESNREKYFETAVAL 167 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~-----~~~~~~~g~~~-~~~~~~l~~~d~~~g~~-~~l~~~~~~~~~~~~~~~ 167 (494)
..+. |||||++|+|.......+.. .+.+..+|... .....+|+++|+++++. +.+.. + .
T Consensus 107 -~~~~--wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~--------- 172 (347)
T 2gop_A 107 -RSLE--WNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-R--------- 172 (347)
T ss_dssp -EEEE--ECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-T---------
T ss_pred -ccee--ECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-C---------
Confidence 3333 99999999998753111111 11111122110 01134699999999887 66654 2 2
Q ss_pred ccCCCcccccccCcEEEEEEecCC-----C-CCeEEEEEcCCCceeEee
Q 011049 168 VFGQGEEDINLNQLKILTSKESKT-----E-ITQYHILSWPLKKSSQIT 210 (494)
Q Consensus 168 ~s~~~~~~~s~d~~~~~~~~~s~~-----~-p~~l~~~~~~~~~~~~lt 210 (494)
.....|+||| ++++..... . ...||.++ +++.+.++
T Consensus 173 ---~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~ 214 (347)
T 2gop_A 173 ---FSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMF 214 (347)
T ss_dssp ---TCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEE
T ss_pred ---cccccCCCCe--EEEEEecccccccccccccEEEeC--CCceEEec
Confidence 1234789999 555543322 1 34788888 56666665
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.26 E-value=4.3e-11 Score=107.40 Aligned_cols=146 Identities=13% Similarity=0.049 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC-----CCceeEEEeCCCCCCCCCCCCCcccccccc
Q 011049 321 VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-----PHLFCCGIARSGSYNKTLTPFGFQTEFRTL 395 (494)
Q Consensus 321 ~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~-----p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~ 395 (494)
.....+++.++++.+.++.. -+++.++||||||.++..++.++ |++++.+|.+++..+-...... ...
T Consensus 77 ~~~~a~~l~~~~~~l~~~~~--~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~~~----~~~- 149 (250)
T 3lp5_A 77 IDKQAVWLNTAFKALVKTYH--FNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTSTT----AKT- 149 (250)
T ss_dssp HHHHHHHHHHHHHHHHTTSC--CSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCCSS----CCC-
T ss_pred HHHHHHHHHHHHHHHHHHcC--CCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccccc----ccC-
Confidence 45668888999999977643 37899999999999999999877 6789999988876542211100 000
Q ss_pred cccHHHHHhcCccccccCCCCCEEEEecC----CCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcC--CCCCccCCcccHH
Q 011049 396 WEATNVYIEMSPITHANKIKKPILIIHGE----VDDKVGLFPMQAERFFDALKGHGALSRLVLLP--FEHHVYAARENVM 469 (494)
Q Consensus 396 ~~~~~~~~~~sp~~~~~~~~~P~li~~G~----~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~--~~~H~~~~~~~~~ 469 (494)
...+.+... ...+.+ ++|+|+|+|+ .|..|| ...+..+...++......+.+.+. +++|.... ++.
T Consensus 150 -~~~~~l~~~--~~~lp~-~vpvl~I~G~~~~~~Dg~Vp--~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~-e~~- 221 (250)
T 3lp5_A 150 -SMFKELYRY--RTGLPE-SLTVYSIAGTENYTSDGTVP--YNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLP-QNK- 221 (250)
T ss_dssp -HHHHHHHHT--GGGSCT-TCEEEEEECCCCCCTTTBCC--HHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCHH-HHH-
T ss_pred -HHHHHHHhc--cccCCC-CceEEEEEecCCCCCCceee--HHHHHHHHHHhcccccceEEEEEeCCCCchhcch-hCH-
Confidence 011112111 112222 6899999999 899998 887777666666544445555555 46697653 333
Q ss_pred HHHHHHHHHHHH
Q 011049 470 HVIWETDRWLQK 481 (494)
Q Consensus 470 ~~~~~~~~fl~~ 481 (494)
.+.+.+.+||.+
T Consensus 222 ~v~~~I~~FL~~ 233 (250)
T 3lp5_A 222 QIVSLIRQYLLA 233 (250)
T ss_dssp HHHHHHHHHTSC
T ss_pred HHHHHHHHHHhc
Confidence 677777777753
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.4e-10 Score=112.32 Aligned_cols=218 Identities=12% Similarity=0.030 Sum_probs=127.0
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh------CCeEEEeCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA------RRFAVLAGPS 305 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~G~~v~~~~~ 305 (494)
.+|.+|++....++. ...|.||++||.+.+ ...|. .....|++ .||.|++++.
T Consensus 92 i~g~~i~~~~~~~~~------~~~~pllllHG~~~s-----------~~~~~----~~~~~L~~~~~~~~~gf~vv~~Dl 150 (408)
T 3g02_A 92 IEGLTIHFAALFSER------EDAVPIALLHGWPGS-----------FVEFY----PILQLFREEYTPETLPFHLVVPSL 150 (408)
T ss_dssp ETTEEEEEEEECCSC------TTCEEEEEECCSSCC-----------GGGGH----HHHHHHHHHCCTTTCCEEEEEECC
T ss_pred ECCEEEEEEEecCCC------CCCCeEEEECCCCCc-----------HHHHH----HHHHHHhcccccccCceEEEEECC
Confidence 389999988886543 114779999997522 11122 23445665 5999999655
Q ss_pred CCCCCCCCCCCC----chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCC
Q 011049 306 IPIIGEGDKLPN----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 381 (494)
Q Consensus 306 ~~~~g~g~~~~~----~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~ 381 (494)
+ |+|.+... .......++|+.+.++.+ +. + +++.++|||+||.+++.++.++|+++...+...+....
T Consensus 151 p---G~G~S~~~~~~~~~~~~~~a~~~~~l~~~l---g~-~-~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~~~~ 222 (408)
T 3g02_A 151 P---GYTFSSGPPLDKDFGLMDNARVVDQLMKDL---GF-G-SGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNMSAP 222 (408)
T ss_dssp T---TSTTSCCSCSSSCCCHHHHHHHHHHHHHHT---TC-T-TCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCCC
T ss_pred C---CCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CC-C-CCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCCCCC
Confidence 4 55555332 122445555555555432 32 1 28999999999999999999998876666665544321
Q ss_pred CCCC--CCccccc----------------------------------------------cccccc-----HH--------
Q 011049 382 TLTP--FGFQTEF----------------------------------------------RTLWEA-----TN-------- 400 (494)
Q Consensus 382 ~~~~--~~~~~~~----------------------------------------------~~~~~~-----~~-------- 400 (494)
.... ..+..+. ...|.+ .+
T Consensus 223 ~~~~~~~~l~~~e~~~~~~~~~~~~~~~~y~~~~~t~p~tl~~~l~dsP~gl~awi~ek~~~w~d~~~~~d~ll~~v~~y 302 (408)
T 3g02_A 223 PEGPSIESLSAAEKEGIARMEKFMTDGYAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLY 302 (408)
T ss_dssp TTCCCGGGSCHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHSCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHH
T ss_pred cccccccCCCHHHHHHHHHHHHHHHhCcchhhhhcCcHHHHHHHHhcChHHHHhhhhhhhhhccCCCCCHHHHHHHHHHH
Confidence 1000 0000000 000100 00
Q ss_pred -----------HHHhc-Cc--c-------ccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCC
Q 011049 401 -----------VYIEM-SP--I-------THANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEH 459 (494)
Q Consensus 401 -----------~~~~~-sp--~-------~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 459 (494)
.|.+. .. . ..+.++++|+++++|.+|...+ +. .+.+.. ..-+.+.+++++|
T Consensus 303 ~~t~~~~~s~~~y~e~~~~~~~~~~~~~~~~l~~i~vPt~v~~~~~D~~~~--p~---~~~~~~---~~~~~~~~~~~gG 374 (408)
T 3g02_A 303 WLTESFPRAIHTYREWVPTASAPNGATPYQKELYIHKPFGFSFFPKDLVPV--PR---SWIATT---GNLVFFRDHAEGG 374 (408)
T ss_dssp HHTTHHHHHGGGHHHHTTC-------CTTTTTTCEEEEEEEEECTBSSSCC--CH---HHHGGG---EEEEEEEECSSCB
T ss_pred HhhccchhHHHHHHhhcccccccccccccccCCCcCCCEEEEeCCcccccC--cH---HHHHhc---CCeeEEEECCCCc
Confidence 00000 00 0 0234567999999999997654 33 233332 2237788999999
Q ss_pred CccCCcccHHHHHHHHHHHHHHhcCCCC
Q 011049 460 HVYAARENVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 460 H~~~~~~~~~~~~~~~~~fl~~~l~~~~ 487 (494)
|... .+..+.+.+.+.+||.+.-..+.
T Consensus 375 Hf~~-lE~Pe~~~~~l~~fl~~~~~~~~ 401 (408)
T 3g02_A 375 HFAA-LERPRELKTDLTAFVEQVWQKGR 401 (408)
T ss_dssp SCHH-HHCHHHHHHHHHHHHHHHC----
T ss_pred Cchh-hhCHHHHHHHHHHHHHHHHHcCc
Confidence 9876 47888999999999998765543
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=5.1e-12 Score=127.00 Aligned_cols=132 Identities=20% Similarity=0.194 Sum_probs=91.2
Q ss_pred cCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHH-hCCeEEEeCCCC-CC
Q 011049 231 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSI-PI 308 (494)
Q Consensus 231 ~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~~-~~ 308 (494)
+.|. +...+|.|.+..+.+ ++|+||++|||+|..++.. .+.. ..|+ .+|++|+.+++| +.
T Consensus 95 ~edc--l~lnv~~P~~~~~~~--~~Pv~v~iHGG~~~~g~~~--------~~~~------~~la~~~g~vvv~~nYRlg~ 156 (542)
T 2h7c_A 95 SEDC--LYLNIYTPADLTKKN--RLPVMVWIHGGGLMVGAAS--------TYDG------LALAAHENVVVVTIQYRLGI 156 (542)
T ss_dssp ESCC--CEEEEEECSCTTSCC--CEEEEEEECCSTTTSCCST--------TSCC------HHHHHHHTCEEEEECCCCHH
T ss_pred CCCC--cEEEEEECCCCCCCC--CCCEEEEECCCcccCCCcc--------ccCH------HHHHhcCCEEEEecCCCCcc
Confidence 3565 555688898754322 4899999999987554322 1211 1345 489999999988 33
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHh--CCCceeEEEeCCCCCC
Q 011049 309 IGEGDKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGSYN 380 (494)
Q Consensus 309 ~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~--~p~~~~a~v~~~~~~~ 380 (494)
.|+..........+....|+.++++|+.++ ...|++||.|+|+|+||+++..++.. .+.+|+++|+.+|...
T Consensus 157 ~gf~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 157 WGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp HHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred ccCCCCCcccCccchhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 343322111111123467889999999875 24799999999999999999988876 3579999999998754
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.20 E-value=1.5e-10 Score=120.59 Aligned_cols=157 Identities=12% Similarity=0.045 Sum_probs=107.7
Q ss_pred cceeeeccCCCCC--C-CCCeeccc-----cccccccceecCCCceEEEEeeee------ccceEEEEEcCCC------C
Q 011049 17 RDIIYTQPAEPAE--G-EKPEILHK-----LDLRFRSVSWCDDSLALVNETWYK------TSQTRTWLVCPGS------K 76 (494)
Q Consensus 17 ~~~i~~~~~~~~~--~-~~~~~lt~-----~~~~~~~p~wspDg~~i~f~~~~~------~~~~~~~~~~~~~------g 76 (494)
..+||++++ + | +++++||. .......++|||||+.|+|.+... ....+||++++++ +
T Consensus 101 ~~~l~~~~~---~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 177 (662)
T 3azo_A 101 DQRLYAFEP---DAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRS 177 (662)
T ss_dssp TCCEEEECT---TSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGG
T ss_pred CCeEEEEcC---CCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCC
Confidence 468999998 6 6 88899998 445667899999999999998641 2257999999998 5
Q ss_pred CCCceEee-ecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecC-CC---ceEE
Q 011049 77 DVAPRVLF-DRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDIN-TG---SKER 151 (494)
Q Consensus 77 ~~~~~~lt-~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~-~g---~~~~ 151 (494)
+.++|+ ...... ..+. |||||++|+|..... .+. ......|+++|++ +| +.++
T Consensus 178 --~~~~l~~~~~~~~-----~~~~--~SpDG~~la~~~~~~-----------~~~--~~~~~~i~~~d~~~~g~~~~~~~ 235 (662)
T 3azo_A 178 --AVRELSDDAHRFV-----TGPR--LSPDGRQAVWLAWDH-----------PRM--PWEGTELKTARVTEDGRFADTRT 235 (662)
T ss_dssp --GSEESSCSCSSEE-----CCCE--ECTTSSEEEEEEECT-----------TCC--TTTCEEEEEEEECTTSCEEEEEE
T ss_pred --ceeEEEecCCCcc-----cCce--ECCCCCEEEEEECCC-----------CCC--CCCCcEEEEEEECCCCcccccEE
Confidence 778887 433221 3445 999999999987421 000 0112359999998 57 5556
Q ss_pred EEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 152 IWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 152 l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
+...... ....+.|+|||+ +++... ......||++++++++.++++.
T Consensus 236 l~~~~~~-----------~~~~~~~spdg~-l~~~~~-~~~~~~l~~~~~~~~~~~~l~~ 282 (662)
T 3azo_A 236 LLGGPEE-----------AIAQAEWAPDGS-LIVATD-RTGWWNLHRVDPATGAATQLCR 282 (662)
T ss_dssp EEEETTB-----------CEEEEEECTTSC-EEEEEC-TTSSCEEEEECTTTCCEEESSC
T ss_pred eCCCCCc-----------eEcceEECCCCe-EEEEEC-CCCCeEEEEEECCCCceeeccc
Confidence 6543211 012348999998 666543 3334589999987777777654
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=99.19 E-value=2.5e-11 Score=120.66 Aligned_cols=132 Identities=21% Similarity=0.189 Sum_probs=90.9
Q ss_pred cCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCC-eEEEeCCCCC-C
Q 011049 231 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR-FAVLAGPSIP-I 308 (494)
Q Consensus 231 ~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-~~v~~~~~~~-~ 308 (494)
+.|. +...+|.|+. . ..++|+||++|||+|..++... .. .....|+++| ++|+.+++|- .
T Consensus 81 ~edc--l~l~v~~P~~--~--~~~~Pviv~iHGGg~~~g~~~~--------~~----~~~~~la~~~~~vvv~~nYRlg~ 142 (498)
T 2ogt_A 81 SEDG--LYLNIWSPAA--D--GKKRPVLFWIHGGAFLFGSGSS--------PW----YDGTAFAKHGDVVVVTINYRMNV 142 (498)
T ss_dssp BSCC--CEEEEEESCS--S--SCCEEEEEEECCSTTTSCCTTC--------GG----GCCHHHHHHHTCEEEEECCCCHH
T ss_pred CCCC--cEEEEEecCC--C--CCCCcEEEEEcCCccCCCCCCC--------Cc----CCHHHHHhCCCEEEEeCCCcCch
Confidence 4455 4556678863 2 2348999999999875543221 10 1234677776 9999999882 2
Q ss_pred CCCCCCCC-----CchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEecChHHHHHHHHHHhC--CCceeEEEeCCCC
Q 011049 309 IGEGDKLP-----NDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGS 378 (494)
Q Consensus 309 ~g~g~~~~-----~~~~~~~~~~d~~~~v~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~~~--p~~~~a~v~~~~~ 378 (494)
.|++.... .....+..+.|+.++++|+.++. ..|++||.|+|+|+||.++..++... ..+|+++|+.+|.
T Consensus 143 ~Gf~~~~~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~ 222 (498)
T 2ogt_A 143 FGFLHLGDSFGEAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGS 222 (498)
T ss_dssp HHCCCCTTTTCGGGTTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCC
T ss_pred hhccCchhhccccccCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCC
Confidence 24332211 11223456889999999998862 36999999999999999998887753 4689999999997
Q ss_pred CC
Q 011049 379 YN 380 (494)
Q Consensus 379 ~~ 380 (494)
..
T Consensus 223 ~~ 224 (498)
T 2ogt_A 223 GS 224 (498)
T ss_dssp TT
T ss_pred cc
Confidence 54
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=99.17 E-value=1.6e-11 Score=123.45 Aligned_cols=132 Identities=17% Similarity=0.169 Sum_probs=89.1
Q ss_pred cCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEEeCCCC-CC
Q 011049 231 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSI-PI 308 (494)
Q Consensus 231 ~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~-~~ 308 (494)
+.|. +...+|.|.... +.++|+||++|||+|..++.... .+ ....|++ .|++|+.++|| +.
T Consensus 93 ~edc--l~l~v~~P~~~~---~~~~Pviv~iHGGg~~~g~~~~~------~~------~~~~la~~~g~vvv~~nYRlg~ 155 (543)
T 2ha2_A 93 SEDC--LYLNVWTPYPRP---ASPTPVLIWIYGGGFYSGAASLD------VY------DGRFLAQVEGAVLVSMNYRVGT 155 (543)
T ss_dssp ESCC--CEEEEEEESSCC---SSCEEEEEEECCSTTTCCCTTSG------GG------CTHHHHHHHCCEEEEECCCCHH
T ss_pred CCcC--CeEEEeecCCCC---CCCCeEEEEECCCccccCCCCCC------cC------ChHHHHhcCCEEEEEecccccc
Confidence 4566 445666786522 23489999999998765432210 11 1235565 79999999988 33
Q ss_pred CCCCCCC-CCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEecChHHHHHHHHHHhC--CCceeEEEeCCCCC
Q 011049 309 IGEGDKL-PNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSY 379 (494)
Q Consensus 309 ~g~g~~~-~~~~~~~~~~~d~~~~v~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~~~--p~~~~a~v~~~~~~ 379 (494)
.|++... ......+..+.|+.++++|+.++. ..|++||.|+|+|+||+++..++... +.+|+++|+.+|..
T Consensus 156 ~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 156 FGFLALPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp HHHCCCTTCSSCCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred cccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 3433220 011112345788999999998862 36999999999999999998877653 46899999999864
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=99.15 E-value=3.1e-11 Score=121.19 Aligned_cols=134 Identities=20% Similarity=0.247 Sum_probs=87.2
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHH-HHH-hCCeEEEeCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSL-IFL-ARRFAVLAGPSIPII 309 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~-~~G~~v~~~~~~~~~ 309 (494)
.|. +...+|.|++..+. .++|+||++|||+|..++.. .+.. ...+. .++ ..|++|+.++||...
T Consensus 103 edc--l~l~v~~P~~~~~~--~~~Pviv~iHGGg~~~g~~~--------~~~~--~~l~~~~l~~~~~~vvv~~nYRl~~ 168 (544)
T 1thg_A 103 EDC--LYLNVFRPAGTKPD--AKLPVMVWIYGGAFVYGSSA--------AYPG--NSYVKESINMGQPVVFVSINYRTGP 168 (544)
T ss_dssp SCC--CEEEEEEETTCCTT--CCEEEEEEECCCTTCCSGGG--------GCCS--HHHHHHHHHTTCCCEEEEECCCCHH
T ss_pred CCC--eEEEEEeCCCCCCC--CCCcEEEEECCCccccCCcc--------ccCc--hHHHHHHhhcCCCEEEEeCCCCCCc
Confidence 454 55677889764332 24899999999987654321 1211 11111 122 258999999987432
Q ss_pred -CCCCCCC--CchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEecChHHHHHHHHHHhC--------CCceeEEEeC
Q 011049 310 -GEGDKLP--NDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--------PHLFCCGIAR 375 (494)
Q Consensus 310 -g~g~~~~--~~~~~~~~~~d~~~~v~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~~~--------p~~~~a~v~~ 375 (494)
|+-.... .....+..+.|+.++++|+.++. ..|++||.|+|+|+||+++..++... ..+|+++|+.
T Consensus 169 ~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~ 248 (544)
T 1thg_A 169 FGFLGGDAITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQ 248 (544)
T ss_dssp HHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEE
T ss_pred ccCCCcccccccCCCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEe
Confidence 2111000 00112345889999999998862 37999999999999999998877752 4689999999
Q ss_pred CCCC
Q 011049 376 SGSY 379 (494)
Q Consensus 376 ~~~~ 379 (494)
+|..
T Consensus 249 Sg~~ 252 (544)
T 1thg_A 249 SGGP 252 (544)
T ss_dssp SCCC
T ss_pred cccc
Confidence 9853
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=99.14 E-value=2.4e-11 Score=122.22 Aligned_cols=131 Identities=17% Similarity=0.105 Sum_probs=86.6
Q ss_pred EEEEEEeC-----CCCCCCC-CCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC-C
Q 011049 237 LTATLYLP-----PGYDQSK-DGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI-I 309 (494)
Q Consensus 237 ~~~~l~~P-----~~~~~~~-~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~-~ 309 (494)
+...+|.| ......+ ..++|+||++|||+|..++..... + ....|+++|++|+.+++|.. .
T Consensus 91 L~lnv~~P~~~~~~~~~~~~~~~~~Pviv~iHGGg~~~g~~~~~~------~------~~~~l~~~g~vvv~~nYRl~~~ 158 (551)
T 2fj0_A 91 IHANIHVPYYALPRDAADKNRFAGLPVLVFIHGGGFAFGSGDSDL------H------GPEYLVSKDVIVITFNYRLNVY 158 (551)
T ss_dssp CEEEEEEEGGGCCCC--------CEEEEEEECCSTTTSCCSCTTT------C------BCTTGGGGSCEEEEECCCCHHH
T ss_pred eEEEEEecCccccccccccCcCCCCCEEEEEcCCccccCCCcccc------c------CHHHHHhCCeEEEEeCCcCCcc
Confidence 56677788 3211111 012899999999987654433110 1 12245789999999998742 2
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHh--CCCceeEEEeCCCCC
Q 011049 310 GEGDKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGSY 379 (494)
Q Consensus 310 g~g~~~~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~--~p~~~~a~v~~~~~~ 379 (494)
|+..........+....|+.++++|+.++ ...|++||.|+|+|+||.++..++.. .+.+|+++|+.+|..
T Consensus 159 Gf~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 159 GFLSLNSTSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp HHCCCSSSSCCSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred ccccCcccCCCCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 32211111111234578899999999886 23699999999999999999988765 357899999999863
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=3.6e-11 Score=120.43 Aligned_cols=130 Identities=19% Similarity=0.242 Sum_probs=85.8
Q ss_pred EEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhH-HHH-HhCCeEEEeCCCCCCC-CCCC
Q 011049 237 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSS-LIF-LARRFAVLAGPSIPII-GEGD 313 (494)
Q Consensus 237 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l-~~~G~~v~~~~~~~~~-g~g~ 313 (494)
+...+|.|++..+.+ ++|+||++|||+|..++.. .+.. .... ..+ ...|++|+.++||-.. |+..
T Consensus 98 l~l~v~~P~~~~~~~--~~Pv~v~iHGGg~~~g~~~--------~~~~--~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~ 165 (534)
T 1llf_A 98 LTINVVRPPGTKAGA--NLPVMLWIFGGGFEIGSPT--------IFPP--AQMVTKSVLMGKPIIHVAVNYRVASWGFLA 165 (534)
T ss_dssp CEEEEEECTTCCTTC--CEEEEEEECCSTTTSCCGG--------GSCC--HHHHHHHHHTTCCCEEEEECCCCHHHHHCC
T ss_pred eEEEEEECCCCCCCC--CceEEEEEeCCCcccCCCc--------ccCc--hHHHHHHHhcCCCEEEEEeCCCCCCCCCCC
Confidence 666788997643332 4899999999987654322 1211 1111 112 2368999999987432 2211
Q ss_pred CC--CCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHhC--------CCceeEEEeCCCC
Q 011049 314 KL--PNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHA--------PHLFCCGIARSGS 378 (494)
Q Consensus 314 ~~--~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~~--------p~~~~a~v~~~~~ 378 (494)
.. ......+..+.|+.++++|+.++ ...|++||.|+|+|+||.++..++... +.+|+++|+.+|.
T Consensus 166 ~~~~~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 166 GDDIKAEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp SHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 10 00011234578999999999885 236999999999999999887776653 4689999999985
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.12 E-value=1.3e-10 Score=104.64 Aligned_cols=193 Identities=15% Similarity=0.091 Sum_probs=101.3
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 334 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~ 334 (494)
.|.||++||.+.+. ..|. ..... .+.+|.|++++. .|+|.+.... ..|+.+.++.
T Consensus 13 ~~~lv~lhg~g~~~-----------~~~~----~~~~~-L~~~~~vi~~Dl---~GhG~S~~~~------~~~~~~~~~~ 67 (242)
T 2k2q_B 13 KTQLICFPFAGGYS-----------ASFR----PLHAF-LQGECEMLAAEP---PGHGTNQTSA------IEDLEELTDL 67 (242)
T ss_dssp CCEEESSCCCCHHH-----------HHHH----HHHHH-HCCSCCCEEEEC---CSSCCSCCCT------TTHHHHHHHH
T ss_pred CceEEEECCCCCCH-----------HHHH----HHHHh-CCCCeEEEEEeC---CCCCCCCCCC------cCCHHHHHHH
Confidence 57789999865211 1121 12223 346799998554 4666653221 2344455554
Q ss_pred HHHcCCCC-CCcEEEEecChHHHHHHHHHHh------CCCceeEEEeCCCCCCCCC-CCCC-------cccccccc---c
Q 011049 335 VVRRGVAD-PSRIAVGGHSYGAFMTAHLLAH------APHLFCCGIARSGSYNKTL-TPFG-------FQTEFRTL---W 396 (494)
Q Consensus 335 l~~~~~~d-~~ri~i~G~S~GG~~a~~~~~~------~p~~~~a~v~~~~~~~~~~-~~~~-------~~~~~~~~---~ 396 (494)
+.+.-.+. .+++.++||||||.+++.+|.+ +|+++-......+...... .... +......+ .
T Consensus 68 ~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (242)
T 2k2q_B 68 YKQELNLRPDRPFVLFGHSMGGMITFRLAQKLEREGIFPQAVIISAIQPPHIQRKKVSHLPDDQFLDHIIQLGGMPAELV 147 (242)
T ss_dssp TTTTCCCCCCSSCEEECCSSCCHHHHHHHHHHHHHHCSSCSEEEEEEECSCCCSCCCSSCTTHHHHHTTCCTTCCCCTTT
T ss_pred HHHHHHhhcCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCCEEEEECCCCCCCCcccccCCCHHHHHHHHHHhCCCChHHh
Confidence 44331122 3689999999999999999986 5775421111111111000 0000 00000000 0
Q ss_pred cc-----------HHHHH---hcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCcc
Q 011049 397 EA-----------TNVYI---EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVY 462 (494)
Q Consensus 397 ~~-----------~~~~~---~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 462 (494)
.+ ...+. .... ..+.++++|+|+++|++|..+ .... +.+++.-...+++++++ ||..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~i~~P~lvi~G~~D~~~---~~~~----~~~~~~~~~~~~~~~~~-gH~~ 218 (242)
T 2k2q_B 148 ENKEVMSFFLPSFRSDYRALEQFEL-YDLAQIQSPVHVFNGLDDKKC---IRDA----EGWKKWAKDITFHQFDG-GHMF 218 (242)
T ss_dssp HHHHTTTTCCSCHHHHHHHHTCCCC-SCCTTCCCSEEEEEECSSCCH---HHHH----HHHHTTCCCSEEEEEEC-CCSH
T ss_pred cCHHHHHHHHHHHHHHHHHHHhccc-CCCCccCCCEEEEeeCCCCcC---HHHH----HHHHHHhcCCeEEEEeC-Ccee
Confidence 00 01111 1111 125678999999999999874 2222 23333323345777876 8976
Q ss_pred CCcccHHHHHHHHHHHHHHh
Q 011049 463 AARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 463 ~~~~~~~~~~~~~~~fl~~~ 482 (494)
. .+..+.+.+.+.+||.++
T Consensus 219 ~-~e~p~~~~~~i~~fl~~~ 237 (242)
T 2k2q_B 219 L-LSQTEEVAERIFAILNQH 237 (242)
T ss_dssp H-HHHCHHHHHHHHHHHHTT
T ss_pred E-cCCHHHHHHHHHHHhhcc
Confidence 5 355667888889998754
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.1e-09 Score=106.07 Aligned_cols=159 Identities=10% Similarity=0.015 Sum_probs=107.5
Q ss_pred CccceeeeccCCCCCCCCCeeccccccccccceecC-CCceEEEEeeeec--cceEEEEEcCCCCCCCceEeeecccccc
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCD-DSLALVNETWYKT--SQTRTWLVCPGSKDVAPRVLFDRVFENV 91 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wsp-Dg~~i~f~~~~~~--~~~~~~~~~~~~g~~~~~~lt~~~~~~~ 91 (494)
.....||++++ ++++.+.++........+.||| ||+.|+|.+.... ...+||+++++++ +.+.++.......
T Consensus 165 ~~~~~l~~~d~---~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~~~~~~ 239 (396)
T 3c5m_A 165 NPTCRLIKVDI---ETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS--NVRKIKEHAEGES 239 (396)
T ss_dssp CCCEEEEEEET---TTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC--CCEESSCCCTTEE
T ss_pred CCcceEEEEEC---CCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC--ceeEeeccCCCcc
Confidence 35568999999 8888888887766677899999 8999999875211 1268999999877 6677765221100
Q ss_pred cCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCC
Q 011049 92 YSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQ 171 (494)
Q Consensus 92 ~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~ 171 (494)
+..+. |||||++|+|..... + .....|+++|+++++.+.+...++.
T Consensus 240 ---~~~~~--~spdg~~l~~~~~~~------------~----~~~~~l~~~d~~~g~~~~l~~~~~~------------- 285 (396)
T 3c5m_A 240 ---CTHEF--WIPDGSAMAYVSYFK------------G----QTDRVIYKANPETLENEEVMVMPPC------------- 285 (396)
T ss_dssp ---EEEEE--ECTTSSCEEEEEEET------------T----TCCEEEEEECTTTCCEEEEEECCSE-------------
T ss_pred ---ccceE--ECCCCCEEEEEecCC------------C----CccceEEEEECCCCCeEEeeeCCCC-------------
Confidence 02223 999999999986421 1 1112399999999887776543321
Q ss_pred Ccccccc-cCcEEEEEEec------------CCCCCeEEEEEcCCCceeEeecCC
Q 011049 172 GEEDINL-NQLKILTSKES------------KTEITQYHILSWPLKKSSQITNFP 213 (494)
Q Consensus 172 ~~~~~s~-d~~~~~~~~~s------------~~~p~~l~~~~~~~~~~~~lt~~~ 213 (494)
...|++ ||+.+++.... ......+|++++.+++.++++...
T Consensus 286 -~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~ 339 (396)
T 3c5m_A 286 -SHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHS 339 (396)
T ss_dssp -EEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECC
T ss_pred -CCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCC
Confidence 137888 99866654321 012368999999888877777543
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=99.11 E-value=4.9e-11 Score=119.58 Aligned_cols=132 Identities=19% Similarity=0.223 Sum_probs=89.5
Q ss_pred cCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEEeCCCCC-C
Q 011049 231 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIP-I 308 (494)
Q Consensus 231 ~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~-~ 308 (494)
+.|. +...+|.|.... .++|+||++|||+|..++..... + ....|++ .|++|+.+++|- .
T Consensus 89 ~edc--l~lnv~~P~~~~----~~~Pv~v~iHGGg~~~g~~~~~~------~------~~~~la~~~~~vvv~~nYRlg~ 150 (529)
T 1p0i_A 89 SEDC--LYLNVWIPAPKP----KNATVLIWIYGGGFQTGTSSLHV------Y------DGKFLARVERVIVVSMNYRVGA 150 (529)
T ss_dssp CSCC--CEEEEEEESSCC----SSEEEEEEECCSTTTSCCTTCGG------G------CTHHHHHHHCCEEEEECCCCHH
T ss_pred CCcC--CeEEEeeCCCCC----CCCeEEEEECCCccccCCCCccc------c------ChHHHhccCCeEEEEecccccc
Confidence 3454 555677887532 23899999999987654332110 1 1235565 799999999873 2
Q ss_pred CCCCCC-CCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHhC--CCceeEEEeCCCCCC
Q 011049 309 IGEGDK-LPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYN 380 (494)
Q Consensus 309 ~g~g~~-~~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~~--p~~~~a~v~~~~~~~ 380 (494)
.|+... .......+....|+.++++|+.++ ...|++||.|+|+|+||.++..++... ..+|+++|+.+|...
T Consensus 151 ~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 228 (529)
T 1p0i_A 151 LGFLALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 228 (529)
T ss_dssp HHHCCCTTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred cccccCCCCCCCcCcccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCccc
Confidence 232221 000111234578889999999885 237999999999999999998887763 368999999999754
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=2.4e-09 Score=112.36 Aligned_cols=160 Identities=10% Similarity=0.046 Sum_probs=101.9
Q ss_pred cceeeeccCCCCCCCCCeeccccc-------cccccceecCCCceEEEEeeeec-cceEEEEEcCCCCCCCceEeeeccc
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLD-------LRFRSVSWCDDSLALVNETWYKT-SQTRTWLVCPGSKDVAPRVLFDRVF 88 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~-------~~~~~p~wspDg~~i~f~~~~~~-~~~~~~~~~~~~g~~~~~~lt~~~~ 88 (494)
++.||+++. .+++++.|+..+ .....|+|||||+.|+|.+..++ ...+||+++++++ +.+.++....
T Consensus 97 ~~~l~~~~~---~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg--~~~~~~~~~~ 171 (710)
T 2xdw_A 97 QRVLYVQDS---LEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGA--KELPDVLERV 171 (710)
T ss_dssp SCEEEEESS---TTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTT--EEEEEEEEEE
T ss_pred EEEEEEEcC---CCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCC--CCCcccccCc
Confidence 558999988 677777654322 24568999999999999988655 2349999999988 6665544332
Q ss_pred ccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCC-CCCCCceEeeecCCCceE--EEEeeCcchhhhhee
Q 011049 89 ENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTP-EGNIPFLDLFDINTGSKE--RIWESNREKYFETAV 165 (494)
Q Consensus 89 ~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~l~~~d~~~g~~~--~l~~~~~~~~~~~~~ 165 (494)
.. ..+. |||||+.|+|......... .++... .....+|+++++.++..+ .++...... ..
T Consensus 172 ~~-----~~~~--wspDg~~l~~~~~~~~~~~------~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~---~~- 234 (710)
T 2xdw_A 172 KF-----SCMA--WTHDGKGMFYNAYPQQDGK------SDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEP---KW- 234 (710)
T ss_dssp CS-----CCEE--ECTTSSEEEEEECCCCSSC------CSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCT---TC-
T ss_pred cc-----ceEE--EEeCCCEEEEEEECCcccc------ccccccccCCCCEEEEEECCCCcccceEEeccCCCC---eE-
Confidence 21 2334 9999999999874321100 001110 122346999999887632 344332110 00
Q ss_pred eeccCCCcccccccCcEEEEEEecCCC-CCeEEEEEcCC
Q 011049 166 ALVFGQGEEDINLNQLKILTSKESKTE-ITQYHILSWPL 203 (494)
Q Consensus 166 ~~~s~~~~~~~s~d~~~~~~~~~s~~~-p~~l~~~~~~~ 203 (494)
.....|||||+.+++....... ..++|++++.+
T Consensus 235 -----~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 235 -----MGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp -----EEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred -----EEEEEEcCCCCEEEEEEEccCCCccEEEEEECcc
Confidence 0134899999999887764433 56899999875
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=99.09 E-value=7.4e-11 Score=118.36 Aligned_cols=132 Identities=17% Similarity=0.177 Sum_probs=89.3
Q ss_pred cCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHH-hCCeEEEeCCCCC-C
Q 011049 231 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIP-I 308 (494)
Q Consensus 231 ~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~~~-~ 308 (494)
+.|. +...+|.|.... .++|+||++|||+|..++..... + ....|+ +.|++|+.++||- .
T Consensus 91 sedc--l~lnv~~P~~~~----~~~Pv~v~iHGG~~~~g~~~~~~------~------~~~~la~~~~~vvv~~nYRlg~ 152 (537)
T 1ea5_A 91 SEDC--LYLNIWVPSPRP----KSTTVMVWIYGGGFYSGSSTLDV------Y------NGKYLAYTEEVVLVSLSYRVGA 152 (537)
T ss_dssp CSCC--CEEEEEECSSCC----SSEEEEEEECCSTTTCCCTTCGG------G------CTHHHHHHHTCEEEECCCCCHH
T ss_pred CCcC--CeEEEeccCCCC----CCCeEEEEECCCcccCCCCCCCc------c------ChHHHHhcCCEEEEEeccCccc
Confidence 3455 455667887531 34899999999987654332110 1 123556 7899999999873 2
Q ss_pred CCCCCC-CCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEecChHHHHHHHHHHh--CCCceeEEEeCCCCCC
Q 011049 309 IGEGDK-LPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGSYN 380 (494)
Q Consensus 309 ~g~g~~-~~~~~~~~~~~~d~~~~v~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~~--~p~~~~a~v~~~~~~~ 380 (494)
.|+... .......+....|+.++++|+.++. ..|++||.|+|+|+||.++..++.. ...+|+++|+.+|...
T Consensus 153 ~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 153 FGFLALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 230 (537)
T ss_dssp HHHCCCTTCSSSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred cccccCCCCCCCcCccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCcc
Confidence 232211 0001112345788999999998862 3699999999999999999888764 2368999999998654
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.7e-09 Score=113.61 Aligned_cols=178 Identities=8% Similarity=-0.007 Sum_probs=109.6
Q ss_pred CccceeeeccCCCCCCCCCeeccccccc---cccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccc
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDLR---FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV 91 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~~---~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~ 91 (494)
++.+.||++|+ ++++.++++..... ...++|||||+.|+|.+. .+||+++++++ +.++++.......
T Consensus 88 ~~~~~i~~~d~---~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-----~~i~~~~~~~g--~~~~~~~~~~~~~ 157 (723)
T 1xfd_A 88 SYTGYYVLSKI---PHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-----NNIYYCAHVGK--QAIRVVSTGKEGV 157 (723)
T ss_dssp CCCSEEEEEES---SSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-----TEEEEESSSSS--CCEEEECCCBTTT
T ss_pred cceeeEEEEEC---CCCceEeccCCccccccccccEECCCCCEEEEEEC-----CeEEEEECCCC--ceEEEecCCCCCc
Confidence 34589999999 88888778765432 457999999999999863 47999999987 7788876532210
Q ss_pred -cC-----------CCCCCceeeCCCCCEEEEEEeccCcc---------------ceEEEEccCCCCCCCCCCceEeeec
Q 011049 92 -YS-----------DPGSPMMTRTSTGTNVIAKIKKENDE---------------QIYILLNGRGFTPEGNIPFLDLFDI 144 (494)
Q Consensus 92 -~~-----------~~~~~~~~~spDG~~i~~~~~~~~~~---------------~~~~~~~~~g~~~~~~~~~l~~~d~ 144 (494)
+. ......+.|||||++|+|........ ...+.+..+|.. .....|+++|+
T Consensus 158 ~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~--~~~~~l~~~d~ 235 (723)
T 1xfd_A 158 IYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSE--NPSISLHVIGL 235 (723)
T ss_dssp EEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSC--CCEEEEEEEES
T ss_pred eECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCC--CCeeEEEEEEC
Confidence 00 00001244999999999987542111 122333334432 12236899999
Q ss_pred CCCce-EEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEee
Q 011049 145 NTGSK-ERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQIT 210 (494)
Q Consensus 145 ~~g~~-~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt 210 (494)
++++. +.+...... ......+ ....|||||+.+++..........++++++.+++...+.
T Consensus 236 ~~~~~~~~l~~~~~~--~~~~~~~----~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~ 296 (723)
T 1xfd_A 236 NGPTHDLEMMPPDDP--RMREYYI----TMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKH 296 (723)
T ss_dssp SSSCCCEECCCCCCG--GGSSEEE----EEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEE
T ss_pred CCCceeEEeeCCccC--CCcccee----EEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEE
Confidence 88874 333322100 0000000 135899999866555444334457999999888766654
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=1.9e-10 Score=107.52 Aligned_cols=210 Identities=11% Similarity=-0.036 Sum_probs=120.7
Q ss_pred CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCc-cCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 233 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNE-FSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 233 dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
++..+...++.|+++..+. .+.||++||.+.+. .. |. ......|.++||.|+.++.+ |+
T Consensus 12 ~~~~l~~~i~~p~~~~~~~---~~~VvllHG~~~~~-----------~~~~~---~~l~~~L~~~G~~v~~~d~~---g~ 71 (317)
T 1tca_A 12 PKSVLDAGLTCQGASPSSV---SKPILLVPGTGTTG-----------PQSFD---SNWIPLSTQLGYTPCWISPP---PF 71 (317)
T ss_dssp CHHHHHHTEEETTBCTTSC---SSEEEEECCTTCCH-----------HHHHT---TTHHHHHHTTTCEEEEECCT---TT
T ss_pred CHHHHhheeeCCCCCCCCC---CCeEEEECCCCCCc-----------chhhH---HHHHHHHHhCCCEEEEECCC---CC
Confidence 3445667788887764322 46789999964211 11 21 12455778889999996664 34
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCC---CceeEEEeCCCCCCCCCCC---
Q 011049 312 GDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP---HLFCCGIARSGSYNKTLTP--- 385 (494)
Q Consensus 312 g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p---~~~~a~v~~~~~~~~~~~~--- 385 (494)
|... .....+++.+.++++.+.. ..+++.++|||+||.++.+++.++| ++++++|++++........
T Consensus 72 g~~~-----~~~~~~~l~~~i~~~~~~~--g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~~~~~~ 144 (317)
T 1tca_A 72 MLND-----TQVNTEYMVNAITALYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPL 144 (317)
T ss_dssp TCSC-----HHHHHHHHHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGHHH
T ss_pred CCCc-----HHHHHHHHHHHHHHHHHHh--CCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCCCCcchhhh
Confidence 4321 2334567778888887653 2378999999999999999988775 7899999998864321100
Q ss_pred --CCcc-cc-c-cccc-ccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHH--HHHHHHHHHhCCCcEEEEEc--
Q 011049 386 --FGFQ-TE-F-RTLW-EATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQ--AERFFDALKGHGALSRLVLL-- 455 (494)
Q Consensus 386 --~~~~-~~-~-~~~~-~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~--~~~~~~~l~~~g~~~~~~~~-- 455 (494)
+.+. .. . .... .....+.... ....++|+++++|+.|..|+ +.. .......|. +. +.+..
T Consensus 145 ~~~~~~~~~~~~~~~~s~f~~~L~~~~----~~~~~vp~~~i~g~~D~iV~--p~~~~g~~~~~~l~--~a--~~~~~~~ 214 (317)
T 1tca_A 145 DALAVSAPSVWQQTTGSALTTALRNAG----GLTQIVPTTNLYSATDEIVQ--PQVSNSPLDSSYLF--NG--KNVQAQA 214 (317)
T ss_dssp HHTTCBCHHHHHTBTTCHHHHHHHHTT----TTBCSSCEEEEECTTCSSSC--CCCSSSTTSTTCCB--TS--EEEEHHH
T ss_pred hhhhhcCchHHhhCcCcHHHHHHHhcC----CCCCCCCEEEEEeCCCCeEC--Cccccccchhhhcc--CC--ccEEeee
Confidence 0000 00 0 0000 0001111100 01246899999999999987 444 111111121 11 22222
Q ss_pred -----CCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 456 -----PFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 456 -----~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
++.+|.... .+. ..+..+++||+.
T Consensus 215 ~~~~~~~~gH~~~l-~~p-~~~~~v~~~L~~ 243 (317)
T 1tca_A 215 VCGPLFVIDHAGSL-TSQ-FSYVVGRSALRS 243 (317)
T ss_dssp HHCTTCCCCTTHHH-HBH-HHHHHHHHHHHC
T ss_pred ccCCCCccCccccc-CCH-HHHHHHHHHhcC
Confidence 477897542 233 456778888876
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.3e-09 Score=114.10 Aligned_cols=166 Identities=8% Similarity=-0.044 Sum_probs=106.3
Q ss_pred cceeeeccCCCCCCCCCeecccccc-------ccccceecCCCceEEEEeeeec-cceEEEEEcCCCCCCCceEeeeccc
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDL-------RFRSVSWCDDSLALVNETWYKT-SQTRTWLVCPGSKDVAPRVLFDRVF 88 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~-------~~~~p~wspDg~~i~f~~~~~~-~~~~~~~~~~~~g~~~~~~lt~~~~ 88 (494)
+.+||+++. .++++++|+..+. ....|+|||||+.|+|....++ ...+||++++++| +.........
T Consensus 93 ~~~l~~~~~---~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg--~~~~~~~~~~ 167 (695)
T 2bkl_A 93 KAILYWRQG---ESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSG--EWSKVDVIEG 167 (695)
T ss_dssp SCEEEEEES---TTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTC--CBCSSCCBSC
T ss_pred EEEEEEEcC---CCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCC--CCcCCcccCc
Confidence 568999998 7888899886543 4678999999999999988655 3479999999988 4331111111
Q ss_pred ccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCC-CCCCCCceEeeecCCCce--EEEEeeCcchhhhhee
Q 011049 89 ENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFT-PEGNIPFLDLFDINTGSK--ERIWESNREKYFETAV 165 (494)
Q Consensus 89 ~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~l~~~d~~~g~~--~~l~~~~~~~~~~~~~ 165 (494)
.. + ..+. |||||+.|+|.+...... +.. ......+|+++++.++.. +.++.......
T Consensus 168 ~~-~---~~~~--wspDg~~l~~~~~d~~~~---------~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~----- 227 (695)
T 2bkl_A 168 GK-Y---ATPK--WTPDSKGFYYEWLPTDPS---------IKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPT----- 227 (695)
T ss_dssp CT-T---CCCE--ECTTSSEEEEEECCCCTT---------SCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTT-----
T ss_pred cc-c---cceE--EecCCCEEEEEEecCCCC---------CccccCCCCCEEEEEECCCCchhceEEEecCCCCE-----
Confidence 10 0 2334 999999999987421100 000 001234699999988763 34544322100
Q ss_pred eeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 166 ALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 166 ~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
......|||||+.+++.........++|+++..+++.++|+.
T Consensus 228 ----~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~ 269 (695)
T 2bkl_A 228 ----TFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVK 269 (695)
T ss_dssp ----CEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEE
T ss_pred ----EEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeec
Confidence 001347999999888876543234579988876677777764
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=99.07 E-value=5.7e-11 Score=119.70 Aligned_cols=141 Identities=18% Similarity=0.177 Sum_probs=87.1
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEEeCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIP 307 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~ 307 (494)
+.+.|. +...+|.|..... ...++|+||++|||+|..++.... .+..........|+. .|++|+.++||-
T Consensus 75 ~~sedc--l~lnv~~P~~~~~-~~~~~PV~v~iHGGg~~~Gs~~~~------~~~~~~~~~~~~la~~~~vvvV~~nYRL 145 (579)
T 2bce_A 75 YGNEDC--LYLNIWVPQGRKE-VSHDLPVMIWIYGGAFLMGASQGA------NFLSNYLYDGEEIATRGNVIVVTFNYRV 145 (579)
T ss_dssp ESCSCC--CEEEEEEEECSSS-CCCSEEEEEECCCCSEEEC-------------CTTGGGCCHHHHHHHTCEEEEECCCC
T ss_pred CCCCCC--CEEEEEECCCCCC-CCCCCeEEEEECCCcccCCCCCcc------ccccccccChHHHhcCCCEEEEEeCCcc
Confidence 344565 5556778865421 122489999999998765443210 000000011234555 579999999872
Q ss_pred -CCCCCCCCCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHh--CCCceeEEEeCCCC
Q 011049 308 -IIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGS 378 (494)
Q Consensus 308 -~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~--~p~~~~a~v~~~~~ 378 (494)
..|+..........+....|+.++++|+.++ ...|++||.|+|+|+||+++..++.. ...+|+++|+.+|.
T Consensus 146 g~~Gfl~~~~~~~pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 146 GPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp HHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred ccccCCcCCCCCCCCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 2233211100011123467889999999875 23699999999999999999888764 34689999998875
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.7e-09 Score=104.66 Aligned_cols=161 Identities=14% Similarity=0.068 Sum_probs=98.1
Q ss_pred CCCCCeeccccccc-----cccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeC
Q 011049 29 EGEKPEILHKLDLR-----FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRT 103 (494)
Q Consensus 29 ~~~~~~~lt~~~~~-----~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~s 103 (494)
.+...++||..... ...|+|||||++|+|.+..++ ..+||+++++++ +.++++....... ..+. ||
T Consensus 19 ~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g-~~~l~~~d~~~~--~~~~l~~~~~~~~----~~~~--~s 89 (396)
T 3c5m_A 19 TQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDG-NRNYYLLNLETQ--QAVQLTEGKGDNT----FGGF--IS 89 (396)
T ss_dssp TCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTS-SCEEEEEETTTT--EEEECCCSSCBCT----TTCE--EC
T ss_pred CCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCC-CceEEEEECCCC--cEEEeecCCCCcc----ccce--EC
Confidence 45557788876443 678999999999999987654 568999999987 7777776543221 1133 99
Q ss_pred CCCCEEEEEEeccC--------ccceEEEEccCC-------------------------CCCC------------CCCCc
Q 011049 104 STGTNVIAKIKKEN--------DEQIYILLNGRG-------------------------FTPE------------GNIPF 138 (494)
Q Consensus 104 pDG~~i~~~~~~~~--------~~~~~~~~~~~g-------------------------~~~~------------~~~~~ 138 (494)
|||++|+|...... .+...+.-...+ ..+. .....
T Consensus 90 pdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~ 169 (396)
T 3c5m_A 90 TDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCR 169 (396)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEE
T ss_pred CCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcce
Confidence 99999999764320 000111100000 0000 12235
Q ss_pred eEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccc-cCcEEEEEEecCCC--CCeEEEEEcCCCceeEee
Q 011049 139 LDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINL-NQLKILTSKESKTE--ITQYHILSWPLKKSSQIT 210 (494)
Q Consensus 139 l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~-d~~~~~~~~~s~~~--p~~l~~~~~~~~~~~~lt 210 (494)
|+++|+++++.+.+...... .....|+| |++.+++....... ...||++++++++.+.++
T Consensus 170 l~~~d~~~g~~~~~~~~~~~------------~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~ 232 (396)
T 3c5m_A 170 LIKVDIETGELEVIHQDTAW------------LGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIK 232 (396)
T ss_dssp EEEEETTTCCEEEEEEESSC------------EEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESS
T ss_pred EEEEECCCCcEEeeccCCcc------------cccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEee
Confidence 77777777776665533211 01347889 78878876543221 157999998877666554
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.02 E-value=1.4e-09 Score=99.68 Aligned_cols=85 Identities=13% Similarity=0.112 Sum_probs=52.6
Q ss_pred hHHHHHhC--CeEEEeCCCCCCCCCCCCCC-CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC
Q 011049 289 SSLIFLAR--RFAVLAGPSIPIIGEGDKLP-NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 289 ~~~~l~~~--G~~v~~~~~~~~~g~g~~~~-~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~ 365 (494)
....|.+. ||.|++++. |+|.+.. ...+.....+++...++.+...... .+++.++|||+||.++..++.++
T Consensus 27 ~~~~L~~~~~g~~v~~~d~----G~g~s~~~~~~~~~~~~~~~~~~~~~l~~~~~l-~~~~~lvGhSmGG~ia~~~a~~~ 101 (279)
T 1ei9_A 27 IKKMVEKKIPGIHVLSLEI----GKTLREDVENSFFLNVNSQVTTVCQILAKDPKL-QQGYNAMGFSQGGQFLRAVAQRC 101 (279)
T ss_dssp HHHHHHHHSTTCCEEECCC----SSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGG-TTCEEEEEETTHHHHHHHHHHHC
T ss_pred HHHHHHHHCCCcEEEEEEe----CCCCccccccccccCHHHHHHHHHHHHHhhhhc-cCCEEEEEECHHHHHHHHHHHHc
Confidence 44455554 889998553 5554311 0111112223333444444332111 26899999999999999999999
Q ss_pred CCc-eeEEEeCCCC
Q 011049 366 PHL-FCCGIARSGS 378 (494)
Q Consensus 366 p~~-~~a~v~~~~~ 378 (494)
|+. ++..|++++.
T Consensus 102 ~~~~v~~lv~~~~p 115 (279)
T 1ei9_A 102 PSPPMVNLISVGGQ 115 (279)
T ss_dssp CSSCEEEEEEESCC
T ss_pred CCcccceEEEecCc
Confidence 984 9999987754
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.2e-09 Score=114.93 Aligned_cols=137 Identities=9% Similarity=-0.069 Sum_probs=91.4
Q ss_pred ccceeeeccCCCCCCCCCeeccccccc----cccceecCCCceEEEEeeeec-----cceEEEEEcCCCCCCCc---eEe
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLR----FRSVSWCDDSLALVNETWYKT-----SQTRTWLVCPGSKDVAP---RVL 83 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~----~~~p~wspDg~~i~f~~~~~~-----~~~~~~~~~~~~g~~~~---~~l 83 (494)
..+.|+++++ ++++.++++..... ...++|||||+.|+|.+..++ ....||+.+++++ +. +.+
T Consensus 34 ~d~~i~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g--~~~~~~~l 108 (719)
T 1z68_A 34 ADNNIVLYNI---ETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNG--EFVRGNEL 108 (719)
T ss_dssp TTSCEEEEES---SSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT--EECCSSCC
T ss_pred CCCCEEEEEc---CCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCC--ccccceec
Confidence 4678999999 88998888876533 678999999999999886432 1468999999987 54 444
Q ss_pred eecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcch-hhh
Q 011049 84 FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREK-YFE 162 (494)
Q Consensus 84 t~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~-~~~ 162 (494)
.. .. ..+. |||||++|+|... . .|+++|+.+|+.++++...... .+.
T Consensus 109 ~~---~~-----~~~~--~SPDG~~la~~~~-------------------~---~i~~~~~~~g~~~~l~~~~~~~~v~~ 156 (719)
T 1z68_A 109 PR---PI-----QYLC--WSPVGSKLAYVYQ-------------------N---NIYLKQRPGDPPFQITFNGRENKIFN 156 (719)
T ss_dssp CS---SB-----CCEE--ECSSTTCEEEEET-------------------T---EEEEESSTTSCCEECCCCCBTTTEEE
T ss_pred Cc---cc-----ccce--ECCCCCEEEEEEC-------------------C---eEEEEeCCCCCcEEEecCCCcCCeEc
Confidence 31 11 3334 9999999999751 1 3888898888777665432110 000
Q ss_pred heee------eccCCCcccccccCcEEEEEEec
Q 011049 163 TAVA------LVFGQGEEDINLNQLKILTSKES 189 (494)
Q Consensus 163 ~~~~------~~s~~~~~~~s~d~~~~~~~~~s 189 (494)
+... +........|||||+.|++....
T Consensus 157 g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 157 GIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp SSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred ccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence 0000 00111346899999999887643
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=5.5e-10 Score=113.12 Aligned_cols=114 Identities=18% Similarity=0.171 Sum_probs=78.7
Q ss_pred CCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEEeCCCC-CCCCCCCC-------CCCchhHHHH
Q 011049 254 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSI-PIIGEGDK-------LPNDRFVEQL 324 (494)
Q Consensus 254 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~-~~~g~g~~-------~~~~~~~~~~ 324 (494)
++|+||++|||+|..++.... .+ ....|++ .|++|+.++|| +..|+... .......+..
T Consensus 140 ~~PV~v~iHGGg~~~g~~~~~------~~------~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~g 207 (585)
T 1dx4_A 140 GLPILIWIYGGGFMTGSATLD------IY------NADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVG 207 (585)
T ss_dssp SEEEEEEECCSTTTCCCTTCG------GG------CCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHH
T ss_pred CCCEEEEECCCcccCCCCCCC------CC------CchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCccc
Confidence 489999999998765443211 01 1234554 79999999987 33333211 0011112345
Q ss_pred HHHHHHHHHHHHHcC---CCCCCcEEEEecChHHHHHHHHHHhC--CCceeEEEeCCCCC
Q 011049 325 VSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSY 379 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~~~--p~~~~a~v~~~~~~ 379 (494)
+.|+.++++|+.++- ..|++||.|+|+|+||.++..++... ..+|+++|+.+|..
T Consensus 208 l~D~~~al~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 208 LWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHHHHHHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 789999999998862 36999999999999999998777653 36899999998864
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=98.99 E-value=8.3e-09 Score=108.79 Aligned_cols=170 Identities=8% Similarity=-0.033 Sum_probs=110.9
Q ss_pred ceeeeccCCCCCCC---CCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccc---
Q 011049 18 DIIYTQPAEPAEGE---KPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV--- 91 (494)
Q Consensus 18 ~~i~~~~~~~~~~~---~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~--- 91 (494)
+.||++++ +++ +.++++........++|||||+.|+|.+ ..+||+++++++ +.++++.......
T Consensus 129 ~~i~~~d~---~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-----~~~i~~~d~~~g--~~~~~~~~~~~~~~~g 198 (741)
T 2ecf_A 129 GELYLYDL---KQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-----GRNLWVIDLASG--RQMQLTADGSTTIGNG 198 (741)
T ss_dssp TEEEEEES---SSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-----TTEEEEEETTTT--EEEECCCCCCSSEEES
T ss_pred CcEEEEEC---CCCCcceEEEcccCCcccccccCCCCCCEEEEEe-----CCcEEEEecCCC--CEEEeccCCccceecc
Confidence 68999999 777 7888888777778899999999999986 247999999987 7777765432210
Q ss_pred ---------cCCCCCCceeeCCCCCEEEEEEeccCcc--------------ceEEEEccCCCCCCCCCCceEeeecCC-C
Q 011049 92 ---------YSDPGSPMMTRTSTGTNVIAKIKKENDE--------------QIYILLNGRGFTPEGNIPFLDLFDINT-G 147 (494)
Q Consensus 92 ---------~~~~~~~~~~~spDG~~i~~~~~~~~~~--------------~~~~~~~~~g~~~~~~~~~l~~~d~~~-g 147 (494)
+..+. .+.|||||++|++........ ...+.+...|.. .....|+++|+++ +
T Consensus 199 ~~~~v~~~~~~~~~--~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~--~~~~~l~~~d~~~~~ 274 (741)
T 2ecf_A 199 IAEFVADEEMDRHT--GYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDA--NVQVKLGVISPAEQA 274 (741)
T ss_dssp CCCHHHHHHSCCCC--SEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSC--CCEEEEEEECSSTTC
T ss_pred ccceeeeecccccc--ceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCC--CCeeEEEEEECCCCC
Confidence 00012 234999999999987532111 122233333321 1223689999998 8
Q ss_pred ceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEec-CCCCCeEEEEEcCCCceeEeec
Q 011049 148 SKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKES-KTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 148 ~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s-~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
+.+.+...... .. .+ ....| |||+.+++.... ......|+++++.+++.+.+..
T Consensus 275 ~~~~~~~~~~~---~~--~~----~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~ 329 (741)
T 2ecf_A 275 QTQWIDLGKEQ---DI--YL----ARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAH 329 (741)
T ss_dssp CCEEECCCSCS---SE--EE----EEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEE
T ss_pred ceEEecCCCCc---ce--EE----EEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEE
Confidence 87665432111 00 00 13489 999999887653 3334579999998887766643
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.8e-08 Score=92.78 Aligned_cols=150 Identities=10% Similarity=0.013 Sum_probs=103.1
Q ss_pred CccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCC-CCCCceEeeecccccccC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS-KDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~-g~~~~~~lt~~~~~~~~~ 93 (494)
+..+.|+++++ .+++.+++.........++|||||+.|++.+ ...|++.++++ + +.+.++.......
T Consensus 19 ~~~~~i~~~d~---~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-----~~~i~~~d~~~~~--~~~~~~~~~~~~~-- 86 (297)
T 2ojh_A 19 SMRSSIEIFNI---RTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-----EGLLYRLSLAGDP--SPEKVDTGFATIC-- 86 (297)
T ss_dssp CCCEEEEEEET---TTTEEEEEEEESSCCEEEEECTTSSEEEEEE-----TTEEEEEESSSCC--SCEECCCTTCCCB--
T ss_pred CcceeEEEEeC---CCCceeeeccCCcceEeeEECCCCCEEEEEc-----CCeEEEEeCCCCC--CceEecccccccc--
Confidence 45679999999 8888888887777778899999999999864 35899999988 7 6666664332110
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCc
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 173 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~ 173 (494)
...+. |||||++|++.... ......|+.+++.+++.+.+...... ..
T Consensus 87 -~~~~~--~spdg~~l~~~~~~-----------------~~~~~~l~~~~~~~~~~~~~~~~~~~-------------~~ 133 (297)
T 2ojh_A 87 -NNDHG--ISPDGALYAISDKV-----------------EFGKSAIYLLPSTGGTPRLMTKNLPS-------------YW 133 (297)
T ss_dssp -CSCCE--ECTTSSEEEEEECT-----------------TTSSCEEEEEETTCCCCEECCSSSSE-------------EE
T ss_pred -ccceE--ECCCCCEEEEEEeC-----------------CCCcceEEEEECCCCceEEeecCCCc-------------cc
Confidence 12233 99999999987631 11234588999888776554432211 12
Q ss_pred ccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEee
Q 011049 174 EDINLNQLKILTSKESKTEITQYHILSWPLKKSSQIT 210 (494)
Q Consensus 174 ~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt 210 (494)
..|+||++.+++..... ....+|.++..+++.+.+.
T Consensus 134 ~~~spdg~~l~~~~~~~-~~~~l~~~~~~~~~~~~~~ 169 (297)
T 2ojh_A 134 HGWSPDGKSFTYCGIRD-QVFDIYSMDIDSGVETRLT 169 (297)
T ss_dssp EEECTTSSEEEEEEEET-TEEEEEEEETTTCCEEECC
T ss_pred eEECCCCCEEEEEECCC-CceEEEEEECCCCcceEcc
Confidence 37899999888765432 2247888888777665554
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=98.97 E-value=6.6e-10 Score=108.44 Aligned_cols=161 Identities=11% Similarity=0.018 Sum_probs=101.4
Q ss_pred CcEEEEecCCCcCCcccCCcccCCC-CccCCCCchhHHHHHh-CCeEEEeCCCCCCCCCCCCCCC--chhHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSP-NEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEA 330 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~ 330 (494)
.|+||++||.+. +. ..|. ......|++ .||.|+.+|.+ |+|.+... ....+....|+.+
T Consensus 70 ~~~vvllHG~~~-----------s~~~~w~---~~~~~~l~~~~~~~Vi~~D~~---g~g~s~~~~~~~~~~~~~~dl~~ 132 (432)
T 1gpl_A 70 RKTRFIIHGFTD-----------SGENSWL---SDMCKNMFQVEKVNCICVDWK---GGSKAQYSQASQNIRVVGAEVAY 132 (432)
T ss_dssp SEEEEEECCTTC-----------CTTSHHH---HHHHHHHHHHCCEEEEEEECH---HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCC-----------CCCchHH---HHHHHHHHhcCCcEEEEEECc---cccCccchhhHhhHHHHHHHHHH
Confidence 689999999641 11 1121 113345565 79999996654 44444211 1123445678899
Q ss_pred HHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCcccc
Q 011049 331 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITH 410 (494)
Q Consensus 331 ~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~ 410 (494)
++++|.++..++.+++.++|||+||.+++.++.++|++++.++++.|........ ++...
T Consensus 133 ~i~~l~~~~g~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p~~~~~--------------------~~~~~ 192 (432)
T 1gpl_A 133 LVQVLSTSLNYAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEPYFQDT--------------------PEEVR 192 (432)
T ss_dssp HHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCTTTTTC--------------------CTTTS
T ss_pred HHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccccceeEEeccccccccCC--------------------Chhhc
Confidence 9999986544567899999999999999999999999999999888753211000 00000
Q ss_pred c-cCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCc
Q 011049 411 A-NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV 461 (494)
Q Consensus 411 ~-~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 461 (494)
+ .....++.+||+..|..|| ... +...+.. ..+..||+.||.
T Consensus 193 l~~~da~~V~vIHt~~d~lVP--~~~----~g~~~~l---g~~dfypngg~~ 235 (432)
T 1gpl_A 193 LDPSDAKFVDVIHTDISPILP--SLG----FGMSQKV---GHMDFFPNGGKD 235 (432)
T ss_dssp CCGGGSSEEEEECSCCSCHHH--HCC----CBCSSCC---SSEEEEEGGGSS
T ss_pred cCcCCCceEEEEEcCCccccc--ccc----ccccccc---cceEEccCCCCC
Confidence 0 1223689999999999876 300 0001111 245678888895
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.96 E-value=8e-09 Score=95.10 Aligned_cols=151 Identities=12% Similarity=0.036 Sum_probs=102.4
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
...||.+++ ++++.++++.... ...++|||||+.|+|....++ ..+||.++++++ +.+.++...... .
T Consensus 109 ~~~l~~~~~---~~~~~~~~~~~~~-~~~~~~spdg~~l~~~~~~~~-~~~l~~~~~~~~--~~~~~~~~~~~~-----~ 176 (297)
T 2ojh_A 109 KSAIYLLPS---TGGTPRLMTKNLP-SYWHGWSPDGKSFTYCGIRDQ-VFDIYSMDIDSG--VETRLTHGEGRN-----D 176 (297)
T ss_dssp SCEEEEEET---TCCCCEECCSSSS-EEEEEECTTSSEEEEEEEETT-EEEEEEEETTTC--CEEECCCSSSCE-----E
T ss_pred cceEEEEEC---CCCceEEeecCCC-ccceEECCCCCEEEEEECCCC-ceEEEEEECCCC--cceEcccCCCcc-----c
Confidence 468999988 7777777776654 566899999999999876655 568999998876 556655433221 2
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
. +.|+|||+.|++.... ....+|+.+++.+++.+.+...... .....|
T Consensus 177 ~--~~~s~dg~~l~~~~~~------------------~~~~~i~~~~~~~~~~~~~~~~~~~------------~~~~~~ 224 (297)
T 2ojh_A 177 G--PDYSPDGRWIYFNSSR------------------TGQMQIWRVRVDGSSVERITDSAYG------------DWFPHP 224 (297)
T ss_dssp E--EEECTTSSEEEEEECT------------------TSSCEEEEEETTSSCEEECCCCSEE------------EEEEEE
T ss_pred c--ceECCCCCEEEEEecC------------------CCCccEEEECCCCCCcEEEecCCcc------------cCCeEE
Confidence 2 3399999999987631 1233588888777766555432211 012478
Q ss_pred cccCcEEEEEEecCC-------CCCeEEEEEcCCCceeEeec
Q 011049 177 NLNQLKILTSKESKT-------EITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 177 s~d~~~~~~~~~s~~-------~p~~l~~~~~~~~~~~~lt~ 211 (494)
+||++.+++...... ....|+++++++++.+.+..
T Consensus 225 s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 225 SPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp CTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEE
T ss_pred CCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeec
Confidence 999998887765422 22469999988877665553
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=8.6e-09 Score=112.93 Aligned_cols=117 Identities=5% Similarity=-0.074 Sum_probs=83.8
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeee---eccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY---KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~---~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
++||++++ +++++++||........|+|||||++|+|.+.+ ++ ..+||+++++++ +.++|+..........
T Consensus 33 ~~l~~~~~---~gg~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~-~~~i~~~d~~~g--~~~~lt~~~~~~~~~~ 106 (1045)
T 1k32_A 33 DDLWEHDL---KSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLN-TADLYFYNGENG--EIKRITYFSGKSTGRR 106 (1045)
T ss_dssp TEEEEEET---TTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCC-EEEEEEEETTTT--EEEECCCCCEEEETTE
T ss_pred CcEEEEEC---CCCcEEEeeeCCCcccCeEECCCCCEEEEEEeeccCCC-CCeEEEEECCCC--CeEEcccCCCcccccc
Confidence 68999999 899999999988888899999999999999876 44 679999999987 7788876543320000
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEee
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES 155 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~ 155 (494)
..-..+.|||||+ ++|..... + .......|+.+|+++++.+++...
T Consensus 107 ~~~~~~~~SpDg~-ll~~~~~~------------~--~~~~~~~l~~~~~~~g~~~~l~~~ 152 (1045)
T 1k32_A 107 MFTDVAGFDPDGN-LIISTDAM------------Q--PFSSMTCLYRVENDGINFVPLNLG 152 (1045)
T ss_dssp ECSEEEEECTTCC-EEEEECTT------------S--SSTTCCEEEEEEGGGTEEEECCSC
T ss_pred cccccccCCCCCE-EEEEECCc------------C--CCcccceEEEEECCCCCeEEecCC
Confidence 0001234999998 88876321 0 111234699999999877665543
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=1.4e-08 Score=106.14 Aligned_cols=155 Identities=11% Similarity=0.093 Sum_probs=104.0
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeee---------ccceEEEEEcCCCCCCCceEeeeccc
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYK---------TSQTRTWLVCPGSKDVAPRVLFDRVF 88 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~---------~~~~~~~~~~~~~g~~~~~~lt~~~~ 88 (494)
..||++|+ ++|+...++........++|| ||+.|+|.+... ....+||++++.++..+.++++.+..
T Consensus 155 ~~i~v~dl---~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~ 230 (693)
T 3iuj_A 155 REIHLMDV---ESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIP 230 (693)
T ss_dssp EEEEEEET---TTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSG
T ss_pred EEEEEEEC---CCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCC
Confidence 47999999 888877665554446789999 999999998642 33678999999876556677877654
Q ss_pred -ccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCC--ceEEEEeeCcchhhhhee
Q 011049 89 -ENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTG--SKERIWESNREKYFETAV 165 (494)
Q Consensus 89 -~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g--~~~~l~~~~~~~~~~~~~ 165 (494)
...+. .. ..|||||++|++..... .....++++|++++ +.+++......
T Consensus 231 ~~~~~~--~~--~~~SpDg~~l~~~~~~~-----------------~~~~~i~~~d~~~~~~~~~~l~~~~~~------- 282 (693)
T 3iuj_A 231 AQHHRY--VG--ATVTEDDRFLLISAANS-----------------TSGNRLYVKDLSQENAPLLTVQGDLDA------- 282 (693)
T ss_dssp GGCCSE--EE--EEECTTSCEEEEEEESS-----------------SSCCEEEEEETTSTTCCCEEEECSSSS-------
T ss_pred CCCeEE--EE--EEEcCCCCEEEEEEccC-----------------CCCcEEEEEECCCCCCceEEEeCCCCc-------
Confidence 22100 11 23899999999987421 11235899998776 45555543321
Q ss_pred eeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCce---eEee
Q 011049 166 ALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKS---SQIT 210 (494)
Q Consensus 166 ~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~---~~lt 210 (494)
....++++|+++++..........|+.+++++++. +.++
T Consensus 283 ------~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~ 324 (693)
T 3iuj_A 283 ------DVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI 324 (693)
T ss_dssp ------CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE
T ss_pred ------eEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEe
Confidence 11237788888888765433346899999887654 4454
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=98.94 E-value=6.7e-09 Score=98.60 Aligned_cols=146 Identities=15% Similarity=0.195 Sum_probs=97.1
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeee-----------------ec------cceEEEEEcC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY-----------------KT------SQTRTWLVCP 73 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~-----------------~~------~~~~~~~~~~ 73 (494)
..+||++++ +++++++++.... ...++|||||+.|+|.+.. ++ ...+||++++
T Consensus 84 ~~~l~~~~~---~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~ 159 (347)
T 2gop_A 84 VSEIWVADL---ETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDT 159 (347)
T ss_dssp EEEEEEEET---TTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEET
T ss_pred cceEEEEEC---CCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEEC
Confidence 346999999 8888899988766 7789999999999998743 00 1468999999
Q ss_pred CCCCCCc-eEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCC-CCceEeeecCCCceEE
Q 011049 74 GSKDVAP-RVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGN-IPFLDLFDINTGSKER 151 (494)
Q Consensus 74 ~~g~~~~-~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~l~~~d~~~g~~~~ 151 (494)
+++ +. +.++. + .. ..+. ||||| ++|..... +...... ..+|+.+| +++.+.
T Consensus 160 ~~~--~~~~~l~~-~-~~-----~~~~--~spdg--~~~~~~~~------------~~~~~~~~~~~l~~~d--~~~~~~ 212 (347)
T 2gop_A 160 ESE--EVIEEFEK-P-RF-----SSGI--WHRDK--IVVNVPHR------------EIIPQYFKFWDIYIWE--DGKEEK 212 (347)
T ss_dssp TTT--EEEEEEEE-E-TT-----CEEE--EETTE--EEEEEECC------------CSSCCSSCCEEEEEEE--TTEEEE
T ss_pred CCC--eEEeeecC-C-Cc-----cccc--CCCCe--EEEEEecc------------cccccccccccEEEeC--CCceEE
Confidence 987 66 67766 3 21 3333 99999 77766321 0000001 33688888 677767
Q ss_pred EEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCC----CCCeEEEEEcCCCceeEee
Q 011049 152 IWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKT----EITQYHILSWPLKKSSQIT 210 (494)
Q Consensus 152 l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~----~p~~l~~~~~~~~~~~~lt 210 (494)
+... +. ...+||||+.+++...... ....||+++ +++.+.++
T Consensus 213 l~~~-~~--------------~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~ 258 (347)
T 2gop_A 213 MFEK-VS--------------FYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGIL 258 (347)
T ss_dssp EEEE-ES--------------EEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESS
T ss_pred eccC-cc--------------eeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEecc
Confidence 6654 22 1134899998888664321 245799988 55555554
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=4.4e-10 Score=113.58 Aligned_cols=128 Identities=20% Similarity=0.177 Sum_probs=83.7
Q ss_pred EEEEEEeCCCCCCC-CCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhC-CeEEEeCCCCCC-CCCCC
Q 011049 237 LTATLYLPPGYDQS-KDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RFAVLAGPSIPI-IGEGD 313 (494)
Q Consensus 237 ~~~~l~~P~~~~~~-~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~~v~~~~~~~~-~g~g~ 313 (494)
+...+|.|...... ...++|+||++|||+|..++.. .+.. ..|+++ |++|+.++||-. .|+..
T Consensus 112 L~l~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~~--------~~~~------~~la~~~~~vvv~~~YRl~~~Gfl~ 177 (574)
T 3bix_A 112 LYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGN--------LYDG------SVLASYGNVIVITVNYRLGVLGFLS 177 (574)
T ss_dssp CEEEEEEEC--------CCEEEEEECCCSSSSSCCGG--------GSCC------HHHHHHHTCEEEEECCCCHHHHHCC
T ss_pred CEEEEEECCCCCcCCCCCCCcEEEEECCCcccCCCCC--------ccCc------hhhhccCCEEEEEeCCcCcccccCc
Confidence 56678888764211 1234899999999987654322 1211 245664 699999998732 22211
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHhCC---CceeEEEeCCCC
Q 011049 314 KLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHAP---HLFCCGIARSGS 378 (494)
Q Consensus 314 ~~~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~~p---~~~~a~v~~~~~ 378 (494)
........+..+.|+.++++|+.++ ...|++||.|+|+|+||.++..++.... .+|+.+|+.+|.
T Consensus 178 ~~~~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 178 TGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp CSSSSCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred CCCCCCCCcccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 1100011134578999999999885 2369999999999999999988876543 579999998874
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.93 E-value=7.7e-09 Score=95.64 Aligned_cols=138 Identities=8% Similarity=0.004 Sum_probs=104.4
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEee-eeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETW-YKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~-~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
.+..||.+++ +|++.++|+..... .|+|||++|+|+.. +.+ ...||+++++|. +.++|+.....
T Consensus 86 n~~~Iy~i~~---dg~~~~~l~~~~~~----~~s~~g~~Iy~~~~~~~~-~~~Iy~~~~dGs--~~~~lt~~~~~----- 150 (302)
T 3s25_A 86 DRNSLCRIKR---NGHGSTVLDPDPCI----YASLIGNYIYYLHYDTQT-ATSLYRIRIDGE--EKKKIKNHYLF----- 150 (302)
T ss_dssp CSEEEEEEET---TSCCCEEEECSCEE----EEEEETTEEEEEEESSSS-CEEEEEEETTSC--CCEEEESSCCC-----
T ss_pred CCCeEEEEeC---CCCcceEeecCCcc----EEEEeCCEEEEEeecCCC-CceEEEEECCCC--CeEEEeCCCce-----
Confidence 3678999999 88888888876533 79999999999862 334 689999999987 77888875431
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcc
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEE 174 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~ 174 (494)
. ++|||++|+|+.. ..++|++++++++..++|...... .
T Consensus 151 -~-----~~~~g~~iy~t~~--------------------g~~~Iy~~~l~g~~~~~l~~~~~~---------------~ 189 (302)
T 3s25_A 151 -T-----CNTSDRYFYYNNP--------------------KNGQLYRYDTASQSEALFYDCNCY---------------K 189 (302)
T ss_dssp -C-----SEEETTEEEEECT--------------------TTCCEEEEETTTTEEEEEECSCEE---------------E
T ss_pred -E-----eeEECCEEEEEeC--------------------CCceEEEEECCCCCEEEEeCCCcc---------------c
Confidence 1 6899999999851 234699999999988887542210 1
Q ss_pred cccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 175 DINLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 175 ~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
.+.|+++.++++... ..+.|++++++++..++|+.
T Consensus 190 ~~~P~g~~iy~t~~~--~~~~I~~~~ldG~~~~~Lt~ 224 (302)
T 3s25_A 190 PVVLDDTNVYYMDVN--RDNAIVHVNINNPNPVVLTE 224 (302)
T ss_dssp EEEEETTEEEEEEGG--GTTEEEEECSSSCCCEECSC
T ss_pred eeeecCCEEEEEEcC--CCcEEEEEECCCCCeEEEeC
Confidence 355889999887643 33789999999988887764
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=1.4e-08 Score=106.39 Aligned_cols=174 Identities=6% Similarity=-0.026 Sum_probs=109.0
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCC-----CCCCceEeeeccccc
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS-----KDVAPRVLFDRVFEN 90 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~-----g~~~~~~lt~~~~~~ 90 (494)
..+.||++|+ ++++.++++........++|||||+.|+|.. ..+||+.++++ + +.++++......
T Consensus 99 ~~~~i~~~d~---~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~-----~~~i~v~~~~~~~~~~g--~~~~~~~~~~~~ 168 (706)
T 2z3z_A 99 TQGGLVGFDM---LARKVTYLFDTNEETASLDFSPVGDRVAYVR-----NHNLYIARGGKLGEGMS--RAIAVTIDGTET 168 (706)
T ss_dssp ETTEEEEEET---TTTEEEEEECCTTCCTTCEECTTSSEEEEEE-----TTEEEEEECBCTTSCCC--CCEESCSCCBTT
T ss_pred ECCEEEEEEC---CCCceEEccCCcccccCCcCCCCCCEEEEEE-----CCeEEEEecCcccccCC--CcEEeccCCCCC
Confidence 3478999999 8888888887766778899999999999963 35799999987 6 777776644331
Q ss_pred ccCCC--------CCCceeeCCCCCEEEEEEeccCccc--------------eEEEEccCCCCCCCCCCceEeeecCCCc
Q 011049 91 VYSDP--------GSPMMTRTSTGTNVIAKIKKENDEQ--------------IYILLNGRGFTPEGNIPFLDLFDINTGS 148 (494)
Q Consensus 91 ~~~~~--------~~~~~~~spDG~~i~~~~~~~~~~~--------------~~~~~~~~g~~~~~~~~~l~~~d~~~g~ 148 (494)
.+.+. ....+.|||||++|++......... ..+.+...|. ......|+++|+++++
T Consensus 169 ~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~--~~~~~~l~~~d~~~~~ 246 (706)
T 2z3z_A 169 LVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGT--PSHHVTVGIYHLATGK 246 (706)
T ss_dssp EEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTS--CCCEEEEEEEETTTTE
T ss_pred eEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCC--CCCeeEEEEEECCCCc
Confidence 10000 0123349999999999873221111 0111122221 1123469999999987
Q ss_pred eEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCC-CCCeEEEEEcCCC-ceeEee
Q 011049 149 KERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKT-EITQYHILSWPLK-KSSQIT 210 (494)
Q Consensus 149 ~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~-~p~~l~~~~~~~~-~~~~lt 210 (494)
.+.+...... ... + ....|+|||+.+++...... ....++++++.++ ..+.+.
T Consensus 247 ~~~~~~~~~~---~~~--~----~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~ 301 (706)
T 2z3z_A 247 TVYLQTGEPK---EKF--L----TNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLF 301 (706)
T ss_dssp EEECCCCSCT---TCE--E----EEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEE
T ss_pred eEeeccCCCC---cee--E----eeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEE
Confidence 6655432111 000 0 13489999998888655432 2247999999887 554443
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=98.86 E-value=4.1e-08 Score=103.39 Aligned_cols=156 Identities=10% Similarity=0.095 Sum_probs=101.1
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeec----------cceEEEEEcCCCCCCCceEeeecc
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT----------SQTRTWLVCPGSKDVAPRVLFDRV 87 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~----------~~~~~~~~~~~~g~~~~~~lt~~~ 87 (494)
..||++|+ ++++....+........++|||| +.|+|++.... ...+||++++.++..+.+.++...
T Consensus 189 ~~i~v~dl---~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~ 264 (741)
T 1yr2_A 189 RTVKFVGV---ADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATP 264 (741)
T ss_dssp EEEEEEET---TTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCT
T ss_pred EEEEEEEC---CCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccC
Confidence 36999999 88887766544444568999999 99999885332 145799999987633345665544
Q ss_pred cccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCC--c-eEEEEeeCcchhhhhe
Q 011049 88 FENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTG--S-KERIWESNREKYFETA 164 (494)
Q Consensus 88 ~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g--~-~~~l~~~~~~~~~~~~ 164 (494)
....+. .. ..|||||++|++.+... ......|+++|++++ + .+.+......
T Consensus 265 ~~~~~~--~~--~~~SpDG~~l~~~~~~~----------------~~~~~~l~~~d~~~~~~~~~~~l~~~~~~------ 318 (741)
T 1yr2_A 265 ELPKRG--HG--ASVSSDGRWVVITSSEG----------------TDPVNTVHVARVTNGKIGPVTALIPDLKA------ 318 (741)
T ss_dssp TCTTCE--EE--EEECTTSCEEEEEEECT----------------TCSCCEEEEEEEETTEECCCEEEECSSSS------
T ss_pred CCCeEE--EE--EEECCCCCEEEEEEEcc----------------CCCcceEEEEECCCCCCcccEEecCCCCc------
Confidence 321100 12 23999999999987421 011335999999887 5 5666543321
Q ss_pred eeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCC--ceeEee
Q 011049 165 VALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLK--KSSQIT 210 (494)
Q Consensus 165 ~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~--~~~~lt 210 (494)
....+++||+.+++..........|++++++++ +.+.+.
T Consensus 319 -------~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~ 359 (741)
T 1yr2_A 319 -------QWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV 359 (741)
T ss_dssp -------CEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE
T ss_pred -------eEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEe
Confidence 112456889988887654333567999998773 455554
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.85 E-value=3.2e-08 Score=91.46 Aligned_cols=138 Identities=9% Similarity=-0.044 Sum_probs=104.6
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeec----------cceEEEEEcCCCCCCCceEeeec
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT----------SQTRTWLVCPGSKDVAPRVLFDR 86 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~----------~~~~~~~~~~~~g~~~~~~lt~~ 86 (494)
.+.||.++. +|..+++|+..... -+++||++|+|+...++ ....||+++++|+ +.++|+..
T Consensus 36 ~~~ly~~~~---dg~~~~~l~~~~~~----~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~--~~~~l~~~ 106 (302)
T 3s25_A 36 NGRLYAMNI---DGSNIHKLSNDTAM----YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGH--GSTVLDPD 106 (302)
T ss_dssp TTEEEEEET---TSCSCEEEEEEEEE----EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSC--CCEEEECS
T ss_pred CceEEEEcC---CCCCCEEccCCcee----eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCC--cceEeecC
Confidence 468999999 99999999987532 47899999999987542 1468999999998 77888765
Q ss_pred ccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheee
Q 011049 87 VFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVA 166 (494)
Q Consensus 87 ~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~ 166 (494)
.+.. ++++|++|+|.... ......|+++++++...++|.....
T Consensus 107 ~~~~-----------~s~~g~~Iy~~~~~-----------------~~~~~~Iy~~~~dGs~~~~lt~~~~--------- 149 (302)
T 3s25_A 107 PCIY-----------ASLIGNYIYYLHYD-----------------TQTATSLYRIRIDGEEKKKIKNHYL--------- 149 (302)
T ss_dssp CEEE-----------EEEETTEEEEEEES-----------------SSSCEEEEEEETTSCCCEEEESSCC---------
T ss_pred CccE-----------EEEeCCEEEEEeec-----------------CCCCceEEEEECCCCCeEEEeCCCc---------
Confidence 4332 79999999998510 1123359999999888888876432
Q ss_pred eccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEee
Q 011049 167 LVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQIT 210 (494)
Q Consensus 167 ~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt 210 (494)
..++++++.|+++.. ..++||+++++++..++|.
T Consensus 150 -------~~~~~~g~~iy~t~~---g~~~Iy~~~l~g~~~~~l~ 183 (302)
T 3s25_A 150 -------FTCNTSDRYFYYNNP---KNGQLYRYDTASQSEALFY 183 (302)
T ss_dssp -------CCSEEETTEEEEECT---TTCCEEEEETTTTEEEEEE
T ss_pred -------eEeeEECCEEEEEeC---CCceEEEEECCCCCEEEEe
Confidence 257889999988744 4568999999888777775
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=98.84 E-value=5.2e-09 Score=98.30 Aligned_cols=174 Identities=13% Similarity=0.087 Sum_probs=100.3
Q ss_pred hCCeEEEeCCCCCCCCCCCC-----CCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC----
Q 011049 295 ARRFAVLAGPSIPIIGEGDK-----LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---- 365 (494)
Q Consensus 295 ~~G~~v~~~~~~~~~g~g~~-----~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~---- 365 (494)
..+|.|+..+.+ |+|.+ .......+..++++.+.++.+. ...++.++|||+||.++..++.+.
T Consensus 115 ~~~~~v~~~d~~---G~g~~~~~~~~~~~~~~~~~a~~~~~~i~~~~-----~~~p~~l~G~S~GG~vA~~~A~~l~~~~ 186 (319)
T 2hfk_A 115 QEERDFLAVPLP---GYGTGTGTGTALLPADLDTALDAQARAILRAA-----GDAPVVLLGHAGGALLAHELAFRLERAH 186 (319)
T ss_dssp TTTCCEEEECCT---TCCBC---CBCCEESSHHHHHHHHHHHHHHHH-----TTSCEEEEEETHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEecCC---CCCCCcccccCCCCCCHHHHHHHHHHHHHHhc-----CCCCEEEEEECHHHHHHHHHHHHHHHhh
Confidence 478999885554 44443 2233335566666666655442 125799999999999999999876
Q ss_pred CCceeEEEeCCCCCCCCCCCC-Ccc-------------cccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCC
Q 011049 366 PHLFCCGIARSGSYNKTLTPF-GFQ-------------TEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGL 431 (494)
Q Consensus 366 p~~~~a~v~~~~~~~~~~~~~-~~~-------------~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~ 431 (494)
++.++.++.+.+......... .+. ............|...-......++++|+++++| .|..++
T Consensus 187 g~~v~~lvl~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g-~D~~~~- 264 (319)
T 2hfk_A 187 GAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLLAMGRYARFLAGPRPGRSSAPVLLVRA-SEPLGD- 264 (319)
T ss_dssp SCCCSEEEEESCCCTTSCHHHHHTHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHSCCCCCCCSCEEEEEE-SSCSSC-
T ss_pred CCCceEEEEeCCCCCCchhHHHHHHHHhhHHHHHhhccccchHHHHHHHHHHHHHHhCCCCCcCCCEEEEEc-CCCCCC-
Confidence 456888888776422100000 000 0000000000111110001123678899999999 999876
Q ss_pred CHHH-HHHHHHHHHhC-CCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 432 FPMQ-AERFFDALKGH-GALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 432 ~~~~-~~~~~~~l~~~-g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
... .. .+... ..+++++.+++ +|.....+....+.+.+.+||.+...
T Consensus 265 -~~~~~~----~~~~~~~~~~~~~~v~g-~H~~~~~e~~~~~~~~i~~~L~~~~~ 313 (319)
T 2hfk_A 265 -WQEERG----DWRAHWDLPHTVADVPG-DHFTMMRDHAPAVAEAVLSWLDAIEG 313 (319)
T ss_dssp -CCGGGC----CCSCCCSSCSEEEEESS-CTTHHHHTCHHHHHHHHHHHHHHHHC
T ss_pred -cccccc----chhhcCCCCCEEEEeCC-CcHHHHHHhHHHHHHHHHHHHHhcCC
Confidence 443 21 22222 23468888985 89753334677888889999987654
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.83 E-value=2.2e-08 Score=105.30 Aligned_cols=146 Identities=10% Similarity=0.104 Sum_probs=91.4
Q ss_pred eeeeccCCCCCCC-CC--eeccccccccccceecCCCceEEEEeeee-ccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 19 IIYTQPAEPAEGE-KP--EILHKLDLRFRSVSWCDDSLALVNETWYK-TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 19 ~i~~~~~~~~~~~-~~--~~lt~~~~~~~~p~wspDg~~i~f~~~~~-~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
+||++|+ +++ +. ..+ +.....++|||||+.|+|++... .+..+||+++++++..+.+.++.+....++.
T Consensus 202 ~l~v~dl---~~g~~~l~~~~---~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~- 274 (751)
T 2xe4_A 202 TIEFKRI---SDPSQTIADKV---SGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSA- 274 (751)
T ss_dssp EEEEEET---TCTTCCCCCCE---EEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEE-
T ss_pred EEEEEEC---CCCCEeCCccc---cCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEE-
Confidence 4999999 777 52 222 22357899999999999997632 2346999999987633345666543322211
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCC--ce--EEEEeeCcchhhhheeeeccC
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTG--SK--ERIWESNREKYFETAVALVFG 170 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g--~~--~~l~~~~~~~~~~~~~~~~s~ 170 (494)
. ..|||||++|++.... .....|+++|++++ +. +.++...
T Consensus 275 --~--~~~SpDg~~l~~~~~~------------------~~~~~l~~~d~~~~~~~~~~~~l~~~~-------------- 318 (751)
T 2xe4_A 275 --F--MYKAADTNTLCIGSQS------------------PETAEVHLLDLRKGNAHNTLEIVRPRE-------------- 318 (751)
T ss_dssp --E--EEECTTSSEEEEEEEC------------------SSCEEEEEEESSSCTTCCCEEESSCCC--------------
T ss_pred --E--EEECCCCCEEEEEecC------------------CCCceEEEEECCCCCCCceeEEeecCC--------------
Confidence 1 2399999999998742 11335888998875 23 3333221
Q ss_pred CCccccccc---CcEEEEEEecC-CCCCeEEEEEcCC-CceeE
Q 011049 171 QGEEDINLN---QLKILTSKESK-TEITQYHILSWPL-KKSSQ 208 (494)
Q Consensus 171 ~~~~~~s~d---~~~~~~~~~s~-~~p~~l~~~~~~~-~~~~~ 208 (494)
....++++ |+.+++..... .....||.+++++ ++++.
T Consensus 319 -~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~ 360 (751)
T 2xe4_A 319 -KGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSH 360 (751)
T ss_dssp -TTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCC
T ss_pred -CCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCccccee
Confidence 12245555 77887765543 2345799998765 34343
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=98.82 E-value=3e-08 Score=92.51 Aligned_cols=107 Identities=15% Similarity=0.061 Sum_probs=71.6
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 334 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~ 334 (494)
.|.||++||.+..... .+....| ......|.++||.|+.++.+ |+|.+.......++..+++.++++.
T Consensus 8 ~~~vVlvHG~~~~~~~-----~~~~~~w----~~l~~~L~~~G~~V~~~d~~---g~g~s~~~~~~~~~l~~~i~~~l~~ 75 (320)
T 1ys1_X 8 RYPIILVHGLTGTDKY-----AGVLEYW----YGIQEDLQQRGATVYVANLS---GFQSDDGPNGRGEQLLAYVKTVLAA 75 (320)
T ss_dssp SSCEEEECCTTCCSEE-----TTTEESS----TTHHHHHHHTTCCEEECCCC---SSCCSSSTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCccc-----cchHHHH----HHHHHHHHhCCCEEEEEcCC---CCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 5779999996522100 0000112 23556788899999996654 4555433333344555555555444
Q ss_pred HHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC
Q 011049 335 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 379 (494)
Q Consensus 335 l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 379 (494)
+ +.+++.++|||+||.++..++.++|++++++|.+++..
T Consensus 76 ~------~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 76 T------GATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp H------CCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred h------CCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 3 34689999999999999999999999999999998753
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=98.79 E-value=1.5e-08 Score=95.53 Aligned_cols=194 Identities=14% Similarity=0.029 Sum_probs=102.2
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 334 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~ 334 (494)
.|.|+++||.+. +...|.. .... ...+|.|+.++.+ |+|.+.......+..++++.+.+..
T Consensus 101 ~~~l~~lhg~~~-----------~~~~~~~----l~~~-L~~~~~v~~~d~~---g~~~~~~~~~~~~~~a~~~~~~i~~ 161 (329)
T 3tej_A 101 GPTLFCFHPASG-----------FAWQFSV----LSRY-LDPQWSIIGIQSP---RPNGPMQTAANLDEVCEAHLATLLE 161 (329)
T ss_dssp SCEEEEECCTTS-----------CCGGGGG----GGGT-SCTTCEEEEECCC---TTTSHHHHCSSHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCcc-----------cchHHHH----HHHh-cCCCCeEEEeeCC---CCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 578999999652 1122321 1112 2568999985554 4443321112234445554444433
Q ss_pred HHHcCCCCCCcEEEEecChHHHHHHHHHHh---CCCceeEEEeCCCCCCCC----CC-CCCccccc--------------
Q 011049 335 VVRRGVADPSRIAVGGHSYGAFMTAHLLAH---APHLFCCGIARSGSYNKT----LT-PFGFQTEF-------------- 392 (494)
Q Consensus 335 l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~---~p~~~~a~v~~~~~~~~~----~~-~~~~~~~~-------------- 392 (494)
+ . ...++.++|||+||.++..++.+ +|++++.++.+.+..... .. ...+....
T Consensus 162 ~---~--~~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (329)
T 3tej_A 162 Q---Q--PHGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAA 236 (329)
T ss_dssp H---C--SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHHTC-----CCCCTHHHHHHHHHHHHHHT
T ss_pred h---C--CCCCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCCccccccccccccChhhHHHHHHHHHHHHHh
Confidence 2 1 12579999999999999999998 999999999877653210 00 00000000
Q ss_pred --cc-cccc----HHHHHhc-C--ccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCc-
Q 011049 393 --RT-LWEA----TNVYIEM-S--PITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV- 461 (494)
Q Consensus 393 --~~-~~~~----~~~~~~~-s--p~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~- 461 (494)
.. .... ...+... . .......+.+|++++.|+.|..++ ...... .+..-.+++++.+++ +|.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~d~~~~--~~~~~~----w~~~~~~~~~~~v~g-~H~~ 309 (329)
T 3tej_A 237 QQGSTSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEG--MSPERA----WSPWIAELDIYRQDC-AHVD 309 (329)
T ss_dssp TCCCSCCHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEEEGGGCCTT--CCHHHH----HTTTEEEEEEEEESS-CGGG
T ss_pred ccccccHHHHHHHHHHHHHHHHHHhcCCCCCcCCCeEEEEeccCCCCC--CCchhh----HHHhcCCcEEEEecC-ChHH
Confidence 00 0000 0001100 0 001133557899999999998765 433222 233224578888885 776
Q ss_pred cCCcccHHHHHHHHHHHH
Q 011049 462 YAARENVMHVIWETDRWL 479 (494)
Q Consensus 462 ~~~~~~~~~~~~~~~~fl 479 (494)
+...+........+.+||
T Consensus 310 ~~~~~~~~~ia~~l~~~L 327 (329)
T 3tej_A 310 IISPGTFEKIGPIIRATL 327 (329)
T ss_dssp GGSTTTHHHHHHHHHHHH
T ss_pred hCCChHHHHHHHHHHHHh
Confidence 333333344444555554
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=6.6e-08 Score=86.89 Aligned_cols=188 Identities=14% Similarity=-0.014 Sum_probs=101.9
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 334 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~ 334 (494)
.|.|+++||.+. +...|. ... .....+|.|+..+.+ |++ ..++++.+.++.
T Consensus 22 ~~~l~~~hg~~~-----------~~~~~~----~~~-~~l~~~~~v~~~d~~---g~~----------~~~~~~~~~i~~ 72 (244)
T 2cb9_A 22 GKNLFCFPPISG-----------FGIYFK----DLA-LQLNHKAAVYGFHFI---EED----------SRIEQYVSRITE 72 (244)
T ss_dssp SSEEEEECCTTC-----------CGGGGH----HHH-HHTTTTSEEEEECCC---CST----------THHHHHHHHHHH
T ss_pred CCCEEEECCCCC-----------CHHHHH----HHH-HHhCCCceEEEEcCC---CHH----------HHHHHHHHHHHH
Confidence 467899998642 111121 122 223468999986654 331 124444444443
Q ss_pred HHHcCCCCCCcEEEEecChHHHHHHHHHHhC---CCceeEEEeCCCCCCCCC-CCCCcccccc---ccc------ccHHH
Q 011049 335 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---PHLFCCGIARSGSYNKTL-TPFGFQTEFR---TLW------EATNV 401 (494)
Q Consensus 335 l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~---p~~~~a~v~~~~~~~~~~-~~~~~~~~~~---~~~------~~~~~ 401 (494)
+ . ...++.++|||+||.+++.++.+. ++.++.++.+++...... .......... .+. .....
T Consensus 73 ~---~--~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (244)
T 2cb9_A 73 I---Q--PEGPYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQSITADTENDDSAAYLPEAVRETVMQKKRC 147 (244)
T ss_dssp H---C--SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSCCCCC-------CCSCHHHHHHHTHHHHH
T ss_pred h---C--CCCCEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCcccccccccHHHHHHHhHHHHHHHHHHHHHH
Confidence 3 2 125799999999999999998875 567888887776432100 0000000000 000 00001
Q ss_pred HHhcCc-cccccCCCCCEEEEecC--CCCCCCCCHHHHHHHHHHHHhC-CCcEEEEEcCCCCCc-cCCcccHHHHHHHHH
Q 011049 402 YIEMSP-ITHANKIKKPILIIHGE--VDDKVGLFPMQAERFFDALKGH-GALSRLVLLPFEHHV-YAARENVMHVIWETD 476 (494)
Q Consensus 402 ~~~~sp-~~~~~~~~~P~li~~G~--~D~~v~~~~~~~~~~~~~l~~~-g~~~~~~~~~~~~H~-~~~~~~~~~~~~~~~ 476 (494)
+..... .....++++|+++++|+ +|.. + .... +.+++. ..++++.++++ +|. +...+....+.+.+.
T Consensus 148 ~~~~~~~~~~~~~i~~Pvl~i~g~~~~D~~-~--~~~~----~~w~~~~~~~~~~~~i~g-gH~~~~~~~~~~~~~~~i~ 219 (244)
T 2cb9_A 148 YQEYWAQLINEGRIKSNIHFIEAGIQTETS-G--AMVL----QKWQDAAEEGYAEYTGYG-AHKDMLEGEFAEKNANIIL 219 (244)
T ss_dssp HHHHHHHCCCCSCBSSEEEEEECSBCSCCC-H--HHHT----TSSGGGBSSCEEEEECSS-BGGGTTSHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCCcCCCEEEEEccCccccc-c--ccch----hHHHHhcCCCCEEEEecC-ChHHHcChHHHHHHHHHHH
Confidence 111100 12345678999999999 8873 2 3322 222222 23589999997 884 333455667777888
Q ss_pred HHHHHhcC
Q 011049 477 RWLQKYCL 484 (494)
Q Consensus 477 ~fl~~~l~ 484 (494)
+||.+...
T Consensus 220 ~~L~~~~~ 227 (244)
T 2cb9_A 220 NILDKINS 227 (244)
T ss_dssp HHHHTC--
T ss_pred HHHhcCcc
Confidence 88876544
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.78 E-value=3.9e-08 Score=95.41 Aligned_cols=86 Identities=19% Similarity=0.203 Sum_probs=64.5
Q ss_pred HHHh-CCeEEEeCCCCCCCCCCCCCCCch------------hHHHHHHHHHHHHHHHHHcC-CCCCCcEEEEecChHHHH
Q 011049 292 IFLA-RRFAVLAGPSIPIIGEGDKLPNDR------------FVEQLVSSAEAAVEEVVRRG-VADPSRIAVGGHSYGAFM 357 (494)
Q Consensus 292 ~l~~-~G~~v~~~~~~~~~g~g~~~~~~~------------~~~~~~~d~~~~v~~l~~~~-~~d~~ri~i~G~S~GG~~ 357 (494)
.+++ .|+.|+..+. +|+|.+.+... ..++.++|+...++++.... .....++.++||||||.+
T Consensus 63 ~lA~~~~~~Vi~~Dh---Rg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l~~~~~~~~~~p~il~GhS~GG~l 139 (446)
T 3n2z_B 63 DVAEELKAMLVFAEH---RYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGML 139 (446)
T ss_dssp HHHHHHTEEEEEECC---TTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHHHHHHSTTGGGCCEEEEEETHHHHH
T ss_pred HHHHHhCCcEEEEec---CCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHHHHHHhcccCCCCCEEEEEeCHHHHH
Confidence 4444 5889998554 46776643211 14678999999999998752 223468999999999999
Q ss_pred HHHHHHhCCCceeEEEeCCCCCC
Q 011049 358 TAHLLAHAPHLFCCGIARSGSYN 380 (494)
Q Consensus 358 a~~~~~~~p~~~~a~v~~~~~~~ 380 (494)
+++++.++|+++.++|+.++...
T Consensus 140 A~~~~~~yP~~v~g~i~ssapv~ 162 (446)
T 3n2z_B 140 AAWFRMKYPHMVVGALAASAPIW 162 (446)
T ss_dssp HHHHHHHCTTTCSEEEEETCCTT
T ss_pred HHHHHHhhhccccEEEEeccchh
Confidence 99999999999999998765543
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=98.75 E-value=5.5e-08 Score=99.42 Aligned_cols=141 Identities=10% Similarity=-0.037 Sum_probs=99.4
Q ss_pred eeeeccCCCCCCCCCeeccccc-cccccceecCCCceEEEEeee-ec-cceEEEEEcC--CCCCCCceEeeecccccccC
Q 011049 19 IIYTQPAEPAEGEKPEILHKLD-LRFRSVSWCDDSLALVNETWY-KT-SQTRTWLVCP--GSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~~~-~~~~~p~wspDg~~i~f~~~~-~~-~~~~~~~~~~--~~g~~~~~~lt~~~~~~~~~ 93 (494)
+||. + ++++++++|... .....|+|||| .|+|.+.. .+ ...+||++++ +++ . ++++...+.
T Consensus 47 ~lw~--~---~~g~~~~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~~~~g~--~-~~l~~~~~~---- 112 (582)
T 3o4h_A 47 NAYL--Y---DGGETVKLNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNTSRPGE--E-QRLEAVKPM---- 112 (582)
T ss_dssp EEEE--E---ETTEEEECCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEEETTSTTC--C-EECTTSCSB----
T ss_pred eEEE--E---cCCCcEeeecccccccccccCCCC--eEEEEeccCCCCcceEEEEEeccCCCc--c-ccccCCCCc----
Confidence 4565 4 578899999877 46678999999 67887764 22 3568999998 554 3 355543322
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCc
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 173 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~ 173 (494)
. ...|||||+.++|.+.. .+ .+.++|+++|+.+++..... ..
T Consensus 113 --~--~~~~s~dg~~~~~~s~~-----------------~~---~~~l~d~~~g~~~~l~~~~~--------------~~ 154 (582)
T 3o4h_A 113 --R--ILSGVDTGEAVVFTGAT-----------------ED---RVALYALDGGGLRELARLPG--------------FG 154 (582)
T ss_dssp --E--EEEEEECSSCEEEEEEC-----------------SS---CEEEEEEETTEEEEEEEESS--------------CE
T ss_pred --e--eeeeCCCCCeEEEEecC-----------------CC---CceEEEccCCcEEEeecCCC--------------ce
Confidence 1 33499999999887632 11 14477999998888776442 24
Q ss_pred ccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 174 EDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 174 ~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
..|||||+.+++..........||++++++++.++|+.
T Consensus 155 ~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~ 192 (582)
T 3o4h_A 155 FVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDS 192 (582)
T ss_dssp EEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECC
T ss_pred EEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeec
Confidence 48999999998776654455679999999888887764
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=1.5e-08 Score=99.16 Aligned_cols=109 Identities=8% Similarity=-0.080 Sum_probs=75.7
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEEeCCCCCCCCCCCCCCC--chhHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~ 331 (494)
.|+||++||.+.+. ...| .......|++ .||.|+++|.+ |+|.+... ........+|+.+.
T Consensus 70 ~p~vvliHG~~~~~----------~~~w---~~~l~~~l~~~~~~~Vi~~D~~---G~G~S~~~~~~~~~~~~~~dl~~l 133 (452)
T 1bu8_A 70 RKTRFIVHGFIDKG----------EDGW---LLDMCKKMFQVEKVNCICVDWR---RGSRTEYTQASYNTRVVGAEIAFL 133 (452)
T ss_dssp SEEEEEECCSCCTT----------CTTH---HHHHHHHHHTTCCEEEEEEECH---HHHSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCC----------CchH---HHHHHHHHHhhCCCEEEEEech---hcccCchhHhHhhHHHHHHHHHHH
Confidence 68999999964210 0111 1112345555 49999996654 45554311 11123457788889
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 379 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 379 (494)
+++|.++..++.+++.|+|||+||.+|+.++.++|++++.++.+.|..
T Consensus 134 i~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 134 VQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (452)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred HHHHHHhcCCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCc
Confidence 999876544567899999999999999999999999999999987753
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=1.3e-07 Score=86.83 Aligned_cols=119 Identities=11% Similarity=-0.051 Sum_probs=77.2
Q ss_pred eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCC
Q 011049 236 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL 315 (494)
Q Consensus 236 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~ 315 (494)
.+...++.|.....+ ..+.||++||.+.+. ...|. ......|.++||.|+.++.. |+|...
T Consensus 49 ~L~~~i~~p~~~~~~---~~~pVVLvHG~~~~~----------~~~w~---~~l~~~L~~~Gy~V~a~Dlp---G~G~~~ 109 (316)
T 3icv_A 49 VLDAGLTCQGASPSS---VSKPILLVPGTGTTG----------PQSFD---SNWIPLSAQLGYTPCWISPP---PFMLND 109 (316)
T ss_dssp HHHHTEEETTBBTTB---CSSEEEEECCTTCCH----------HHHHT---TTHHHHHHHTTCEEEEECCT---TTTCSC
T ss_pred hHhhhEeCCCCCCCC---CCCeEEEECCCCCCc----------HHHHH---HHHHHHHHHCCCeEEEecCC---CCCCCc
Confidence 445556666432222 246788899964110 01121 12455778899999986653 444321
Q ss_pred CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC---CCceeEEEeCCCCCC
Q 011049 316 PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---PHLFCCGIARSGSYN 380 (494)
Q Consensus 316 ~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~---p~~~~a~v~~~~~~~ 380 (494)
.....+++.+.++.+.+.- ..+++.|+||||||.++.+++.++ +++++.+|++++...
T Consensus 110 -----~~~~~~~la~~I~~l~~~~--g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 110 -----TQVNTEYMVNAITTLYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp -----HHHHHHHHHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred -----HHHHHHHHHHHHHHHHHHh--CCCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCC
Confidence 2334566777788777653 236899999999999998887775 589999999988754
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=98.67 E-value=2.7e-08 Score=97.35 Aligned_cols=109 Identities=7% Similarity=-0.027 Sum_probs=75.1
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhC-CeEEEeCCCCCCCCCCCCCCC--chhHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~ 331 (494)
.|+||++||.+.+. ...| .......|+++ ||.|+++|.+ |+|.+... ........+|+.+.
T Consensus 70 ~p~vvliHG~~~~~----------~~~w---~~~~~~~l~~~~~~~Vi~~D~~---g~G~S~~~~~~~~~~~~~~dl~~~ 133 (452)
T 1w52_X 70 RKTHFVIHGFRDRG----------EDSW---PSDMCKKILQVETTNCISVDWS---SGAKAEYTQAVQNIRIVGAETAYL 133 (452)
T ss_dssp SCEEEEECCTTCCS----------SSSH---HHHHHHHHHTTSCCEEEEEECH---HHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCC----------CchH---HHHHHHHHHhhCCCEEEEEecc---cccccccHHHHHhHHHHHHHHHHH
Confidence 58999999964210 0112 11123455554 9999996654 45554321 11224456788888
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 379 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 379 (494)
+++|.++..++.+++.|+|||+||.++..++.++|++++.++.+.|..
T Consensus 134 i~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1w52_X 134 IQQLLTELSYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAE 181 (452)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred HHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccceeeEEeccccc
Confidence 898876533566899999999999999999999999999999987753
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=98.63 E-value=1.1e-07 Score=84.41 Aligned_cols=183 Identities=10% Similarity=0.031 Sum_probs=96.0
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 334 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~ 334 (494)
.|.|+++||.+. +...|. .....| .. |.|+.++.+ |.+. ...|+.+.++.
T Consensus 17 ~~~l~~~hg~~~-----------~~~~~~----~~~~~l-~~-~~v~~~d~~---g~~~----------~~~~~~~~i~~ 66 (230)
T 1jmk_C 17 EQIIFAFPPVLG-----------YGLMYQ----NLSSRL-PS-YKLCAFDFI---EEED----------RLDRYADLIQK 66 (230)
T ss_dssp SEEEEEECCTTC-----------CGGGGH----HHHHHC-TT-EEEEEECCC---CSTT----------HHHHHHHHHHH
T ss_pred CCCEEEECCCCC-----------chHHHH----HHHHhc-CC-CeEEEecCC---CHHH----------HHHHHHHHHHH
Confidence 477899998641 111121 122233 34 999886653 3332 23445555544
Q ss_pred HHHcCCCCCCcEEEEecChHHHHHHHHHHhCC---CceeEEEeCCCCCCCCCCCCC---ccccc-------cc--cccc-
Q 011049 335 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP---HLFCCGIARSGSYNKTLTPFG---FQTEF-------RT--LWEA- 398 (494)
Q Consensus 335 l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p---~~~~a~v~~~~~~~~~~~~~~---~~~~~-------~~--~~~~- 398 (494)
+ . ...++.++|||+||.+++.++.+.+ +.++.++..++........+. ..... .. ....
T Consensus 67 ~---~--~~~~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (230)
T 1jmk_C 67 L---Q--PEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSE 141 (230)
T ss_dssp H---C--CSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHTTTCSGGGSH
T ss_pred h---C--CCCCeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCcccccccccHHHHHHHHHhcChhhhhhhhH
Confidence 4 2 1257999999999999999987753 568888777654221100000 00000 00 0000
Q ss_pred --HHH-------HHhcCc-cccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHh-CCCcEEEEEcCCCCCc-cCCcc
Q 011049 399 --TNV-------YIEMSP-ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG-HGALSRLVLLPFEHHV-YAARE 466 (494)
Q Consensus 399 --~~~-------~~~~sp-~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~H~-~~~~~ 466 (494)
... +..... .....++++|+++++|++|..++ .. . ..+.+ ...+++++++++ +|. +...+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~-~----~~w~~~~~~~~~~~~i~g-~H~~~~~~~ 213 (230)
T 1jmk_C 142 AVKHGLKQKTHAFYSYYVNLISTGQVKADIDLLTSGADFDIP--EW-L----ASWEEATTGAYRMKRGFG-THAEMLQGE 213 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCC--TT-E----ECSGGGBSSCEEEEECSS-CGGGTTSHH
T ss_pred HHHHHHHHHHHHHHHHhhhccccccccccEEEEEeCCCCCCc--cc-c----chHHHhcCCCeEEEEecC-ChHHHcCcH
Confidence 000 111100 02345678999999999999875 21 1 11222 123588999998 883 22234
Q ss_pred cHHHHHHHHHHHHH
Q 011049 467 NVMHVIWETDRWLQ 480 (494)
Q Consensus 467 ~~~~~~~~~~~fl~ 480 (494)
........+.+||.
T Consensus 214 ~~~~~~~~i~~~l~ 227 (230)
T 1jmk_C 214 TLDRNAGILLEFLN 227 (230)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHh
Confidence 44445555555553
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=98.60 E-value=1.8e-07 Score=85.97 Aligned_cols=103 Identities=14% Similarity=-0.019 Sum_probs=67.9
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 334 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~ 334 (494)
.|.||++||.+.... . .....| ......|.++||.|+.++.+ |+|.+. ...++..+++.++++.
T Consensus 7 ~~~vvlvHG~~~~~~-----~-~~~~~~----~~~~~~L~~~G~~v~~~d~~---g~g~s~---~~~~~~~~~i~~~~~~ 70 (285)
T 1ex9_A 7 KYPIVLAHGMLGFDN-----I-LGVDYW----FGIPSALRRDGAQVYVTEVS---QLDTSE---VRGEQLLQQVEEIVAL 70 (285)
T ss_dssp SSCEEEECCTTCCSE-----E-TTEESS----TTHHHHHHHTTCCEEEECCC---SSSCHH---HHHHHHHHHHHHHHHH
T ss_pred CCeEEEeCCCCCCcc-----c-cccccH----HHHHHHHHhCCCEEEEEeCC---CCCCch---hhHHHHHHHHHHHHHH
Confidence 577999999642110 0 000112 23556788899999996654 444431 1223344444444443
Q ss_pred HHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC
Q 011049 335 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 379 (494)
Q Consensus 335 l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 379 (494)
+ +.+++.++|||+||.++..++.++|++++++|.+++..
T Consensus 71 ~------~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 71 S------GQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp H------CCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred h------CCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 3 34689999999999999999999999999999998853
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=3.1e-07 Score=100.64 Aligned_cols=145 Identities=14% Similarity=0.000 Sum_probs=103.1
Q ss_pred cceeeeccCCCCCCCCCeecccccc-ccccceecCCCceEEEEeeeeccceEEE-EEcCCCCCCCceEeeecccccccCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDL-RFRSVSWCDDSLALVNETWYKTSQTRTW-LVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~-~~~~p~wspDg~~i~f~~~~~~~~~~~~-~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
++.||++++ .+++.++++.... ....++|| ||+.|+|.+. ...+| +++++++ +.+.++......
T Consensus 316 ~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~----~~~l~~~~d~~~~--~~~~l~~~~~~~---- 381 (1045)
T 1k32_A 316 RGQAFIQDV---SGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR----EGDFLGIYDYRTG--KAEKFEENLGNV---- 381 (1045)
T ss_dssp TTEEEEECT---TSSBEEECSCCSCEEEEEECSS-SEEEEEEEET----TEEEEEEEETTTC--CEEECCCCCCSE----
T ss_pred cCEEEEEcC---CCCceEEccCCCcceEEeeeEc-CCCeEEEEEC----CCceEEEEECCCC--CceEecCCccce----
Confidence 678999998 7777777776665 66789999 9999999874 45899 9999887 667776221111
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcc
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEE 174 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~ 174 (494)
. .+.|||||++|++... .. .++++|+++|+.+.+...... .....
T Consensus 382 -~--~~~~SpDG~~la~~~~------------------~~---~v~~~d~~tg~~~~~~~~~~~-----------~v~~~ 426 (1045)
T 1k32_A 382 -F--AMGVDRNGKFAVVAND------------------RF---EIMTVDLETGKPTVIERSREA-----------MITDF 426 (1045)
T ss_dssp -E--EEEECTTSSEEEEEET------------------TS---EEEEEETTTCCEEEEEECSSS-----------CCCCE
T ss_pred -e--eeEECCCCCEEEEECC------------------CC---eEEEEECCCCceEEeccCCCC-----------Cccce
Confidence 1 2349999999998752 11 489999999988777643211 01234
Q ss_pred cccccCcEEEEEEecC------CCCCeEEEEEcCCCceeEee
Q 011049 175 DINLNQLKILTSKESK------TEITQYHILSWPLKKSSQIT 210 (494)
Q Consensus 175 ~~s~d~~~~~~~~~s~------~~p~~l~~~~~~~~~~~~lt 210 (494)
.|||||+.+++..... ..+..++++++.+++.+.++
T Consensus 427 ~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 427 TISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp EECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS
T ss_pred EECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEee
Confidence 8999999888876543 33468999999887755554
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=98.51 E-value=1.6e-07 Score=91.38 Aligned_cols=109 Identities=10% Similarity=-0.065 Sum_probs=72.6
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHH-HhCCeEEEeCCCCCCCCCCCCCCCc--hhHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF-LARRFAVLAGPSIPIIGEGDKLPND--RFVEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~G~~v~~~~~~~~~g~g~~~~~~--~~~~~~~~d~~~~ 331 (494)
.|+||++||.+.+. ...|. ......| ...+|.|+++|.+ |+|.+.... .......+++.+.
T Consensus 69 ~p~vvliHG~~~s~----------~~~w~---~~l~~~ll~~~~~~VI~vD~~---g~g~s~y~~~~~~~~~v~~~la~l 132 (449)
T 1hpl_A 69 RKTRFIIHGFIDKG----------EESWL---STMCQNMFKVESVNCICVDWK---SGSRTAYSQASQNVRIVGAEVAYL 132 (449)
T ss_dssp SEEEEEECCCCCTT----------CTTHH---HHHHHHHHHHCCEEEEEEECH---HHHSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEecCCCCC----------CccHH---HHHHHHHHhcCCeEEEEEeCC---cccCCccHHHHHHHHHHHHHHHHH
Confidence 68999999954110 01121 1122333 4579999996654 444442111 1123345677888
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 379 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 379 (494)
+++|.++..++.+++.|+|||+||.+|..++.++|++++.++.+.|..
T Consensus 133 l~~L~~~~g~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~ 180 (449)
T 1hpl_A 133 VGVLQSSFDYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAE 180 (449)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred HHHHHHhcCCCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCccc
Confidence 888875433567899999999999999999999999999999887653
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=98.50 E-value=2.1e-07 Score=87.22 Aligned_cols=88 Identities=13% Similarity=0.082 Sum_probs=61.6
Q ss_pred hhHHHHHhCCeE---EEeCCCCCCCCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHH
Q 011049 288 TSSLIFLARRFA---VLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLL 362 (494)
Q Consensus 288 ~~~~~l~~~G~~---v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~ 362 (494)
.....|.++||. |+.++.+ |+|.+... ........+++.+.++.+.++. ..+++.|+||||||.++..++
T Consensus 72 ~l~~~L~~~Gy~~~~V~~~D~~---g~G~S~~~~~~~~~~~~~~~l~~~I~~l~~~~--g~~~v~LVGHSmGG~iA~~~a 146 (342)
T 2x5x_A 72 SVYAELKARGYNDCEIFGVTYL---SSSEQGSAQYNYHSSTKYAIIKTFIDKVKAYT--GKSQVDIVAHSMGVSMSLATL 146 (342)
T ss_dssp CHHHHHHHTTCCTTSEEEECCS---CHHHHTCGGGCCBCHHHHHHHHHHHHHHHHHH--TCSCEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEEEEeCC---CCCccCCccccCCHHHHHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHH
Confidence 355678889998 8885654 33332111 0112344666777777776642 236899999999999999999
Q ss_pred HhC--CCceeEEEeCCCCCC
Q 011049 363 AHA--PHLFCCGIARSGSYN 380 (494)
Q Consensus 363 ~~~--p~~~~a~v~~~~~~~ 380 (494)
.++ |++++.+|++++...
T Consensus 147 ~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 147 QYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp HHHTCGGGEEEEEEESCCTT
T ss_pred HHcCchhhhcEEEEECCCcc
Confidence 998 899999999887643
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=98.49 E-value=1.7e-07 Score=91.30 Aligned_cols=108 Identities=10% Similarity=-0.012 Sum_probs=70.9
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEEeCCCCCCCCCCCCCCC--chhHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~ 331 (494)
.|+||++||.+.+. ...| .......|++ .+|.|+++|.+ |.|.+... ........+++.+.
T Consensus 70 ~p~vvliHG~~~s~----------~~~w---~~~l~~~ll~~~~~~VI~vD~~---g~g~s~y~~~~~~~~~~a~~l~~l 133 (450)
T 1rp1_A 70 KKTRFIIHGFIDKG----------EENW---LLDMCKNMFKVEEVNCICVDWK---KGSQTSYTQAANNVRVVGAQVAQM 133 (450)
T ss_dssp SEEEEEECCCCCTT----------CTTH---HHHHHHHHTTTCCEEEEEEECH---HHHSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEccCCCCC----------Ccch---HHHHHHHHHhcCCeEEEEEeCc---cccCCcchHHHHHHHHHHHHHHHH
Confidence 68999999954110 0011 1112223444 48999996654 33333211 11133456778888
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 379 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 379 (494)
+++|.++..++.+++.|+|||+||.+|..++.++|+ ++.++.+.|..
T Consensus 134 l~~L~~~~g~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~ 180 (450)
T 1rp1_A 134 LSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVE 180 (450)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCC
T ss_pred HHHHHHhcCCChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCccc
Confidence 888874433567899999999999999999999999 99998877653
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=98.43 E-value=1.4e-06 Score=69.65 Aligned_cols=64 Identities=16% Similarity=-0.006 Sum_probs=44.4
Q ss_pred hCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC
Q 011049 295 ARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 367 (494)
Q Consensus 295 ~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~ 367 (494)
+++|.|+.++.+ |+|.+.......++..+|+.+.++.+ +.+++.++|||+||.+++.++.++|.
T Consensus 40 ~~~~~v~~~d~~---G~G~s~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 40 PEGYAFYLLDLP---GYGRTEGPRMAPEELAHFVAGFAVMM------NLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp CTTSEEEEECCT---TSTTCCCCCCCHHHHHHHHHHHHHHT------TCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred hCCcEEEEECCC---CCCCCCCCCCCHHHHHHHHHHHHHHc------CCCccEEEEEChHHHHHHHHHhcCCc
Confidence 345999996654 45554332221455566666655543 34689999999999999999999985
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=2.4e-07 Score=89.73 Aligned_cols=117 Identities=16% Similarity=0.225 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCC---CceeEEEeCCCCCCCCCCCCCcccccccccccH
Q 011049 323 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP---HLFCCGIARSGSYNKTLTPFGFQTEFRTLWEAT 399 (494)
Q Consensus 323 ~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p---~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (494)
...+++.+.++.++++. ..+++.++||||||.+++.++.++| ++++++|++++..+..
T Consensus 109 ~~~~dla~~L~~ll~~l--g~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~~d----------------- 169 (484)
T 2zyr_A 109 ETFSRLDRVIDEALAES--GADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWGVD----------------- 169 (484)
T ss_dssp HHHHHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCSEE-----------------
T ss_pred hhHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccccc-----------------
Confidence 44667777777777653 2378999999999999999999997 4899999998864310
Q ss_pred HHHHhcCccccccCCCCCEEEEecCCCCC--CCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHH
Q 011049 400 NVYIEMSPITHANKIKKPILIIHGEVDDK--VGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDR 477 (494)
Q Consensus 400 ~~~~~~sp~~~~~~~~~P~li~~G~~D~~--v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 477 (494)
-....++|.+.|..|.. ++.+.. .|+. ..+.+++++.+|.... .+. ...+.+.+
T Consensus 170 ------------~p~g~~~L~ilG~~d~~p~V~~pss-------~L~~---ga~~v~i~~a~H~~ll-~dp-~v~~~Vl~ 225 (484)
T 2zyr_A 170 ------------APEGIPTLAVFGNPKALPALGLPEE-------KVVY---NATNVYFNNMTHVQLC-TSP-ETFAVMFE 225 (484)
T ss_dssp ------------CCTTSCEEEEEECGGGSCCSSCCSS-------CCEE---TSEEEEETTCCHHHHH-HCH-HHHHHHHH
T ss_pred ------------cCcCCHHHHHhCCCCcCCcccChhH-------hcCC---CceEEEECCCCccccc-cCH-HHHHHHHH
Confidence 01235677777765531 110111 1110 2356677999997542 222 55667889
Q ss_pred HHHHh
Q 011049 478 WLQKY 482 (494)
Q Consensus 478 fl~~~ 482 (494)
||...
T Consensus 226 fL~~~ 230 (484)
T 2zyr_A 226 FINGY 230 (484)
T ss_dssp HHHSS
T ss_pred Hhccc
Confidence 98754
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=98.21 E-value=2.6e-05 Score=72.90 Aligned_cols=156 Identities=10% Similarity=-0.049 Sum_probs=91.2
Q ss_pred ccceeeeccCCCCCCCCCeecccccc---ccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc-c
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDL---RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN-V 91 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~---~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~-~ 91 (494)
..+.|+++|+ ++++......... ....++|||||+.+++.... ...|+++++.++ +........... .
T Consensus 9 ~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~---~~~v~~~d~~~~--~~~~~~~~~~~~~~ 80 (337)
T 1pby_B 9 RPDKLVVIDT---EKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK---SESLVKIDLVTG--ETLGRIDLSTPEER 80 (337)
T ss_dssp TTTEEEEEET---TTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT---TTEEEEEETTTC--CEEEEEECCBTTEE
T ss_pred CCCeEEEEEC---CCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC---CCeEEEEECCCC--CeEeeEEcCCcccc
Confidence 4578999998 6666554443333 35678999999988776532 457999999876 443322221100 0
Q ss_pred cCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCC
Q 011049 92 YSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQ 171 (494)
Q Consensus 92 ~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~ 171 (494)
...+.. +.|||||+++++...... ...++. ......|+++|+++++.......... -
T Consensus 81 ~~~~~~--~~~s~dg~~l~~~~~~~~-------~~~~~~--~~~~~~i~v~d~~~~~~~~~~~~~~~------------~ 137 (337)
T 1pby_B 81 VKSLFG--AALSPDGKTLAIYESPVR-------LELTHF--EVQPTRVALYDAETLSRRKAFEAPRQ------------I 137 (337)
T ss_dssp EECTTC--EEECTTSSEEEEEEEEEE-------ECSSCE--EECCCEEEEEETTTTEEEEEEECCSS------------C
T ss_pred cccccc--eEECCCCCEEEEEecccc-------cccccc--cccCceEEEEECCCCcEEEEEeCCCC------------c
Confidence 001222 338999998887752100 000000 00123589999988765544332211 1
Q ss_pred CcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeE
Q 011049 172 GEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 208 (494)
Q Consensus 172 ~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~ 208 (494)
....|+||++.+++. + ..++++++.+++...
T Consensus 138 ~~~~~s~dg~~l~~~--~----~~i~~~d~~~~~~~~ 168 (337)
T 1pby_B 138 TMLAWARDGSKLYGL--G----RDLHVMDPEAGTLVE 168 (337)
T ss_dssp CCEEECTTSSCEEEE--S----SSEEEEETTTTEEEE
T ss_pred ceeEECCCCCEEEEe--C----CeEEEEECCCCcEee
Confidence 234789999887775 2 469999988776543
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=98.19 E-value=3e-05 Score=72.56 Aligned_cols=148 Identities=7% Similarity=-0.053 Sum_probs=83.8
Q ss_pred eeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccc-eEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 19 IIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQ-TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~-~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
.|+++|+ ++++..+..........++|||||+.|++....+. . -.+|.++.++ ............ ...|.
T Consensus 109 ~i~v~d~---~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~-~~i~~~~~~~~g---~~~~~~~~~~~~-~~~~~- 179 (331)
T 3u4y_A 109 NMQSYSF---LKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSA-NTVRRFKIDADG---VLFDTGQEFISG-GTRPF- 179 (331)
T ss_dssp EEEEEET---TTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTT-TEEEEEEECTTC---CEEEEEEEEECS-SSSEE-
T ss_pred cEEEEEC---CCCCeEEEEECCCCccceEECCCCCEEEEEecCCC-ceEEEEEECCCC---cEeecCCccccC-CCCcc-
Confidence 8999998 66666555444444567899999998776644322 2 3455554322 211111000000 00111
Q ss_pred CceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCce---EEEEeeCcchhhhheeeeccCCCcc
Q 011049 98 PMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSK---ERIWESNREKYFETAVALVFGQGEE 174 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~---~~l~~~~~~~~~~~~~~~~s~~~~~ 174 (494)
.+.|||||+++++.... ...+.++|+++++. ......... -...
T Consensus 180 -~~~~spdg~~l~v~~~~--------------------~~~v~v~d~~~~~~~~~~~~~~~~~~------------~~~~ 226 (331)
T 3u4y_A 180 -NITFTPDGNFAFVANLI--------------------GNSIGILETQNPENITLLNAVGTNNL------------PGTI 226 (331)
T ss_dssp -EEEECTTSSEEEEEETT--------------------TTEEEEEECSSTTSCEEEEEEECSSC------------CCCE
T ss_pred -ceEECCCCCEEEEEeCC--------------------CCeEEEEECCCCcccceeeeccCCCC------------CceE
Confidence 23489999988776421 11488889888775 222221111 1234
Q ss_pred cccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 175 DINLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 175 ~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
.|+|||+.+++... ....+++++.++++.+.+..
T Consensus 227 ~~spdg~~l~v~~~---~~~~i~~~d~~~~~~~~~~~ 260 (331)
T 3u4y_A 227 VVSRDGSTVYVLTE---STVDVFNFNQLSGTLSFVKS 260 (331)
T ss_dssp EECTTSSEEEEECS---SEEEEEEEETTTTEEEEEEE
T ss_pred EECCCCCEEEEEEc---CCCEEEEEECCCCceeeecc
Confidence 78999987776543 23458899988877655543
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=0.00017 Score=67.86 Aligned_cols=151 Identities=7% Similarity=-0.077 Sum_probs=92.6
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccc--cCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV--YSD 94 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~--~~~ 94 (494)
.+.|+++|. ++++.............++|+|||+.+++.... ...|+++++.++ +............ +..
T Consensus 68 ~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~---~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~~ 139 (353)
T 3vgz_A 68 GGVVYRLDP---VTLEVTQAIHNDLKPFGATINNTTQTLWFGNTV---NSAVTAIDAKTG--EVKGRLVLDDRKRTEEVR 139 (353)
T ss_dssp SEEEEEECT---TTCCEEEEEEESSCCCSEEEETTTTEEEEEETT---TTEEEEEETTTC--CEEEEEESCCCCCCSSCC
T ss_pred CccEEEEcC---CCCeEEEEEecCCCcceEEECCCCCEEEEEecC---CCEEEEEeCCCC--eeEEEEecCCCccccccC
Confidence 468999998 767665555444455678999999987776432 358999999877 4433332211110 001
Q ss_pred CCCC-ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCc
Q 011049 95 PGSP-MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 173 (494)
Q Consensus 95 ~~~~-~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~ 173 (494)
|..| .+.|||||+++++.... ....|+++|+++++........+. .-..
T Consensus 140 ~~~~~~~~~s~dg~~l~~~~~~-------------------~~~~i~~~d~~~~~~~~~~~~~~~-----------~~~~ 189 (353)
T 3vgz_A 140 PLQPRELVADDATNTVYISGIG-------------------KESVIWVVDGGNIKLKTAIQNTGK-----------MSTG 189 (353)
T ss_dssp CCEEEEEEEETTTTEEEEEEES-------------------SSCEEEEEETTTTEEEEEECCCCT-----------TCCC
T ss_pred CCCCceEEECCCCCEEEEEecC-------------------CCceEEEEcCCCCceEEEecCCCC-----------ccce
Confidence 1111 13489999987766421 112489999998876554431221 0123
Q ss_pred ccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEe
Q 011049 174 EDINLNQLKILTSKESKTEITQYHILSWPLKKSSQI 209 (494)
Q Consensus 174 ~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~l 209 (494)
..|+||++.+++... ...+++++..+++....
T Consensus 190 ~~~s~dg~~l~~~~~----~~~i~~~d~~~~~~~~~ 221 (353)
T 3vgz_A 190 LALDSEGKRLYTTNA----DGELITIDTADNKILSR 221 (353)
T ss_dssp CEEETTTTEEEEECT----TSEEEEEETTTTEEEEE
T ss_pred EEECCCCCEEEEEcC----CCeEEEEECCCCeEEEE
Confidence 478999988776532 35788999887765443
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=98.17 E-value=2.9e-06 Score=77.93 Aligned_cols=69 Identities=14% Similarity=0.088 Sum_probs=44.0
Q ss_pred eEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC---CCcee---E
Q 011049 298 FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---PHLFC---C 371 (494)
Q Consensus 298 ~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~---p~~~~---a 371 (494)
+.|+.++..+ . ......+..++++.+.++.+ . ...++.++||||||.+++.++.+. |++++ .
T Consensus 49 ~~v~~~d~~~---~----~~~~~~~~~a~~~~~~i~~~---~--~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~ 116 (283)
T 3tjm_A 49 IPTYGLQCTR---A----APLDSIHSLAAYYIDCIRQV---Q--PEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNS 116 (283)
T ss_dssp SCEEEECCCT---T----SCCSCHHHHHHHHHHHHTTT---C--CSSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCE
T ss_pred ceEEEEecCC---C----CCCCCHHHHHHHHHHHHHHh---C--CCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccce
Confidence 7787755521 1 11122345555555444322 1 126799999999999999998865 77887 8
Q ss_pred EEeCCCC
Q 011049 372 GIARSGS 378 (494)
Q Consensus 372 ~v~~~~~ 378 (494)
++.+++.
T Consensus 117 lvlid~~ 123 (283)
T 3tjm_A 117 LFLFDGS 123 (283)
T ss_dssp EEEESCC
T ss_pred EEEEcCC
Confidence 8877653
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=98.15 E-value=8.5e-05 Score=71.21 Aligned_cols=144 Identities=8% Similarity=0.000 Sum_probs=92.6
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
..+.|+++|+ +.++.............++|||||+.|++.... ...|++.++.++ +.......... +
T Consensus 10 ~d~~v~v~d~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---d~~i~v~d~~~~--~~~~~~~~~~~-----v 76 (391)
T 1l0q_A 10 ESDNISVIDV---TSNKVTATIPVGSNPMGAVISPDGTKVYVANAH---SNDVSIIDTATN--NVIATVPAGSS-----P 76 (391)
T ss_dssp TTTEEEEEET---TTTEEEEEEECSSSEEEEEECTTSSEEEEEEGG---GTEEEEEETTTT--EEEEEEECSSS-----E
T ss_pred CCCEEEEEEC---CCCeEEEEeecCCCcceEEECCCCCEEEEECCC---CCeEEEEECCCC--eEEEEEECCCC-----c
Confidence 4578999999 666665554444445678999999988776533 457999998876 44433332211 1
Q ss_pred CCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccc
Q 011049 96 GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEED 175 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~ 175 (494)
. .+.|+|||++|++.... . ..++++|+++++.......... . ....
T Consensus 77 ~--~~~~spdg~~l~~~~~~------------------~--~~v~v~d~~~~~~~~~~~~~~~-----~-------~~~~ 122 (391)
T 1l0q_A 77 Q--GVAVSPDGKQVYVTNMA------------------S--STLSVIDTTSNTVAGTVKTGKS-----P-------LGLA 122 (391)
T ss_dssp E--EEEECTTSSEEEEEETT------------------T--TEEEEEETTTTEEEEEEECSSS-----E-------EEEE
T ss_pred c--ceEECCCCCEEEEEECC------------------C--CEEEEEECCCCeEEEEEeCCCC-----c-------ceEE
Confidence 1 23499999988876421 1 1488999998876554433221 1 1247
Q ss_pred ccccCcEEEEEEecCCCCCeEEEEEcCCCceeEe
Q 011049 176 INLNQLKILTSKESKTEITQYHILSWPLKKSSQI 209 (494)
Q Consensus 176 ~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~l 209 (494)
|++|++.++++... ...++++++.+++....
T Consensus 123 ~s~dg~~l~~~~~~---~~~v~~~d~~~~~~~~~ 153 (391)
T 1l0q_A 123 LSPDGKKLYVTNNG---DKTVSVINTVTKAVINT 153 (391)
T ss_dssp ECTTSSEEEEEETT---TTEEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEEeCC---CCEEEEEECCCCcEEEE
Confidence 88999888766432 35788999877665443
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=0.00022 Score=67.09 Aligned_cols=144 Identities=5% Similarity=-0.082 Sum_probs=87.3
Q ss_pred cceeeeccCCCCCCCCCeeccc-cccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHK-LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~-~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
.+.|+++|. ++++...... ........+|+|||+.|++... ...++++++.++ +............ .
T Consensus 163 ~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~----~~~i~~~d~~~~--~~~~~~~~~~~~~---~ 230 (353)
T 3vgz_A 163 ESVIWVVDG---GNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA----DGELITIDTADN--KILSRKKLLDDGK---E 230 (353)
T ss_dssp SCEEEEEET---TTTEEEEEECCCCTTCCCCEEETTTTEEEEECT----TSEEEEEETTTT--EEEEEEECCCSSS---C
T ss_pred CceEEEEcC---CCCceEEEecCCCCccceEEECCCCCEEEEEcC----CCeEEEEECCCC--eEEEEEEcCCCCC---C
Confidence 456888888 6665554433 3333567899999998877642 468999998876 4333322211100 0
Q ss_pred CCC-ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcc
Q 011049 96 GSP-MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEE 174 (494)
Q Consensus 96 ~~~-~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~ 174 (494)
..+ .+.|+|||+++++... . ...++++|+.+++.......... ...
T Consensus 231 ~~~~~~~~s~dg~~l~~~~~------------------~--~~~v~~~d~~~~~~~~~~~~~~~-------------~~~ 277 (353)
T 3vgz_A 231 HFFINISLDTARQRAFITDS------------------K--AAEVLVVDTRNGNILAKVAAPES-------------LAV 277 (353)
T ss_dssp CCEEEEEEETTTTEEEEEES------------------S--SSEEEEEETTTCCEEEEEECSSC-------------CCE
T ss_pred cccceEEECCCCCEEEEEeC------------------C--CCEEEEEECCCCcEEEEEEcCCC-------------ceE
Confidence 111 1348999998866541 1 12488999988876544332211 124
Q ss_pred cccccCcEEEEEEecCCCCCeEEEEEcCCCceeE
Q 011049 175 DINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 208 (494)
Q Consensus 175 ~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~ 208 (494)
.|++|++.+++.... ...+++++..+++...
T Consensus 278 ~~s~dg~~l~v~~~~---~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 278 LFNPARNEAYVTHRQ---AGKVSVIDAKSYKVVK 308 (353)
T ss_dssp EEETTTTEEEEEETT---TTEEEEEETTTTEEEE
T ss_pred EECCCCCEEEEEECC---CCeEEEEECCCCeEEE
Confidence 788999887765432 3578899987765443
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=98.04 E-value=6.5e-05 Score=70.15 Aligned_cols=157 Identities=9% Similarity=-0.065 Sum_probs=87.8
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
.+.|+++|+ ++++..+..........++|||||+.|++. ..+++++++.++ +.......... .
T Consensus 114 ~~~i~v~d~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~------~~~i~~~d~~~~--~~~~~~~~~~~------~ 176 (337)
T 1pby_B 114 PTRVALYDA---ETLSRRKAFEAPRQITMLAWARDGSKLYGL------GRDLHVMDPEAG--TLVEDKPIQSW------E 176 (337)
T ss_dssp CCEEEEEET---TTTEEEEEEECCSSCCCEEECTTSSCEEEE------SSSEEEEETTTT--EEEEEECSTTT------T
T ss_pred CceEEEEEC---CCCcEEEEEeCCCCcceeEECCCCCEEEEe------CCeEEEEECCCC--cEeeeeecccc------C
Confidence 478888888 666655444434445678899999998876 246999999876 43333322111 1
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEcc--CCCC--CCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCC
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNG--RGFT--PEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQG 172 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~--~g~~--~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~ 172 (494)
.+. .|+|||+++++...... .-..++... .+.. +......|+++|+.+++...+...... ... .
T Consensus 177 ~~~-~~s~dg~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~---~~~-------~ 244 (337)
T 1pby_B 177 AET-YAQPDVLAVWNQHESSG-VMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMD---VFY-------F 244 (337)
T ss_dssp TTT-BCCCBCCCCCCCCTTTT-EEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECS---SCE-------E
T ss_pred CCc-eeCCCccEEeeeccCCC-ceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCC---Cce-------e
Confidence 222 38999997765432110 000011000 0000 000011488999999876533322111 000 1
Q ss_pred cccccccCcEEEEEEecCCCCCeEEEEEcCCCceeE
Q 011049 173 EEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 208 (494)
Q Consensus 173 ~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~ 208 (494)
...|+||++.+++. ...++++++++++...
T Consensus 245 ~~~~s~dg~~l~~~------~~~v~~~d~~~~~~~~ 274 (337)
T 1pby_B 245 STAVNPAKTRAFGA------YNVLESFDLEKNASIK 274 (337)
T ss_dssp EEEECTTSSEEEEE------ESEEEEEETTTTEEEE
T ss_pred eEEECCCCCEEEEe------CCeEEEEECCCCcCcc
Confidence 24789999887765 1579999988776543
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=98.01 E-value=7.8e-05 Score=71.48 Aligned_cols=143 Identities=5% Similarity=-0.057 Sum_probs=91.8
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
..+.|+++|+ .+++..............+|||||+.|++.... ...|+++++.++ +..........
T Consensus 52 ~d~~i~v~d~---~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~---~~~v~v~d~~~~--~~~~~~~~~~~------ 117 (391)
T 1l0q_A 52 HSNDVSIIDT---ATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMA---SSTLSVIDTTSN--TVAGTVKTGKS------ 117 (391)
T ss_dssp GGTEEEEEET---TTTEEEEEEECSSSEEEEEECTTSSEEEEEETT---TTEEEEEETTTT--EEEEEEECSSS------
T ss_pred CCCeEEEEEC---CCCeEEEEEECCCCccceEECCCCCEEEEEECC---CCEEEEEECCCC--eEEEEEeCCCC------
Confidence 4578999998 667665554444456678899999998876432 357999999876 44443332211
Q ss_pred CCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccc
Q 011049 96 GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEED 175 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~ 175 (494)
-..+.|+|||+++++.... . ..++++|+.+++.......... . ....
T Consensus 118 -~~~~~~s~dg~~l~~~~~~-----------------~---~~v~~~d~~~~~~~~~~~~~~~-----~-------~~~~ 164 (391)
T 1l0q_A 118 -PLGLALSPDGKKLYVTNNG-----------------D---KTVSVINTVTKAVINTVSVGRS-----P-------KGIA 164 (391)
T ss_dssp -EEEEEECTTSSEEEEEETT-----------------T---TEEEEEETTTTEEEEEEECCSS-----E-------EEEE
T ss_pred -cceEEECCCCCEEEEEeCC-----------------C---CEEEEEECCCCcEEEEEecCCC-----c-------ceEE
Confidence 1123499999988776521 1 1488999988876554432211 1 1237
Q ss_pred ccccCcEEEEEEecCCCCCeEEEEEcCCCceeE
Q 011049 176 INLNQLKILTSKESKTEITQYHILSWPLKKSSQ 208 (494)
Q Consensus 176 ~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~ 208 (494)
|+|+++.+++.... ...++++++.+++...
T Consensus 165 ~~~dg~~l~~~~~~---~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 165 VTPDGTKVYVANFD---SMSISVIDTVTNSVID 194 (391)
T ss_dssp ECTTSSEEEEEETT---TTEEEEEETTTTEEEE
T ss_pred ECCCCCEEEEEeCC---CCEEEEEECCCCeEEE
Confidence 88999887665432 3568889987765443
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=98.00 E-value=0.00021 Score=69.56 Aligned_cols=149 Identities=5% Similarity=-0.068 Sum_probs=93.5
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeec----cceEEEEEcCCCCCCCceEeeecccccc
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT----SQTRTWLVCPGSKDVAPRVLFDRVFENV 91 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~----~~~~~~~~~~~~g~~~~~~lt~~~~~~~ 91 (494)
..+.|+++|+ ..++..............+|+|||+.|+..+.... ....|++.++.++ +...........
T Consensus 232 ~~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~--~~~~~~~~~~~~- 305 (433)
T 3bws_A 232 ISEDISVIDR---KTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE--KLIDTIGPPGNK- 305 (433)
T ss_dssp TTTEEEEEET---TTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT--EEEEEEEEEECE-
T ss_pred CCCcEEEEEC---CCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC--cEEeeccCCCCc-
Confidence 3568899998 66665554444445567889999999888765321 1468999999876 443333222111
Q ss_pred cCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCC
Q 011049 92 YSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQ 171 (494)
Q Consensus 92 ~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~ 171 (494)
. .+.|+|||+.+++.... .+ .+.++|+++++.......... .
T Consensus 306 ----~--~~~~~~~g~~l~~~~~~-----------------~~---~v~v~d~~~~~~~~~~~~~~~-----~------- 347 (433)
T 3bws_A 306 ----R--HIVSGNTENKIYVSDMC-----------------CS---KIEVYDLKEKKVQKSIPVFDK-----P------- 347 (433)
T ss_dssp ----E--EEEECSSTTEEEEEETT-----------------TT---EEEEEETTTTEEEEEEECSSS-----E-------
T ss_pred ----c--eEEECCCCCEEEEEecC-----------------CC---EEEEEECCCCcEEEEecCCCC-----C-------
Confidence 1 23489999988776421 11 488899988765544432211 1
Q ss_pred CcccccccCcEEEEEEecCCCC-----------CeEEEEEcCCCceeE
Q 011049 172 GEEDINLNQLKILTSKESKTEI-----------TQYHILSWPLKKSSQ 208 (494)
Q Consensus 172 ~~~~~s~d~~~~~~~~~s~~~p-----------~~l~~~~~~~~~~~~ 208 (494)
....|+||++.+++........ ..+++++..+++...
T Consensus 348 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~ 395 (433)
T 3bws_A 348 NTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKE 395 (433)
T ss_dssp EEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEE
T ss_pred CeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEE
Confidence 1247889998777765443221 479999987766543
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=97.97 E-value=0.00025 Score=66.09 Aligned_cols=140 Identities=8% Similarity=-0.064 Sum_probs=82.8
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCc--eEeeecccccccC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAP--RVLFDRVFENVYS 93 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~--~~lt~~~~~~~~~ 93 (494)
..+.|+++|+ ++++.............++|||||+.|++.... ...|+++++.++ +. +.+.....
T Consensus 18 ~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---~~~i~~~d~~~~--~~~~~~~~~~~~----- 84 (331)
T 3u4y_A 18 HLRRISFFST---DTLEILNQITLGYDFVDTAITSDCSNVVVTSDF---CQTLVQIETQLE--PPKVVAIQEGQS----- 84 (331)
T ss_dssp GGTEEEEEET---TTCCEEEEEECCCCEEEEEECSSSCEEEEEEST---TCEEEEEECSSS--SCEEEEEEECSS-----
T ss_pred CCCeEEEEeC---cccceeeeEEccCCcceEEEcCCCCEEEEEeCC---CCeEEEEECCCC--ceeEEecccCCC-----
Confidence 3468999998 767765544433322378999999987766432 358999999877 43 22222111
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCc
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 173 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~ 173 (494)
|.. .+.|||||++++ .... .+....|.++|+++++.......... . ..
T Consensus 85 -~~~-~~~~s~dg~~l~-~~~~-----------------~~~~~~i~v~d~~~~~~~~~~~~~~~-----~-------~~ 132 (331)
T 3u4y_A 85 -SMA-DVDITPDDQFAV-TVTG-----------------LNHPFNMQSYSFLKNKFISTIPIPYD-----A-------VG 132 (331)
T ss_dssp -CCC-CEEECTTSSEEE-ECCC-----------------SSSSCEEEEEETTTTEEEEEEECCTT-----E-------EE
T ss_pred -Ccc-ceEECCCCCEEE-EecC-----------------CCCcccEEEEECCCCCeEEEEECCCC-----c-------cc
Confidence 122 134899999888 4311 11112589999998876554332211 1 13
Q ss_pred ccccccCcEEEEEEecCCCCCeEEEEEcC
Q 011049 174 EDINLNQLKILTSKESKTEITQYHILSWP 202 (494)
Q Consensus 174 ~~~s~d~~~~~~~~~s~~~p~~l~~~~~~ 202 (494)
..|+|||+.+++..... ...+++++++
T Consensus 133 ~~~spdg~~l~~~~~~~--~~~i~~~~~~ 159 (331)
T 3u4y_A 133 IAISPNGNGLILIDRSS--ANTVRRFKID 159 (331)
T ss_dssp EEECTTSSCEEEEEETT--TTEEEEEEEC
T ss_pred eEECCCCCEEEEEecCC--CceEEEEEEC
Confidence 47899998777655432 1225555544
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=97.96 E-value=7e-05 Score=71.09 Aligned_cols=131 Identities=10% Similarity=-0.050 Sum_probs=69.4
Q ss_pred ccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccc-cccCCCCCCceeeCCCCCEEEEEEeccCccceE
Q 011049 44 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFE-NVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIY 122 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~-~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~ 122 (494)
..++|||||+.|++.... ...|++++++++ +.+.+...... .....+. .+.|||||++|++....
T Consensus 214 ~~~~~spdg~~l~v~~~~---~~~v~v~~~~~g--~~~~~~~~~~~~~~~~~~~--~i~~spdg~~l~v~~~~------- 279 (361)
T 3scy_A 214 RHLIFNSDGKFAYLINEI---GGTVIAFRYADG--MLDEIQTVAADTVNAQGSG--DIHLSPDGKYLYASNRL------- 279 (361)
T ss_dssp EEEEECTTSSEEEEEETT---TCEEEEEEEETT--EEEEEEEEESCSSCCCCEE--EEEECTTSSEEEEEECS-------
T ss_pred eEEEEcCCCCEEEEEcCC---CCeEEEEEecCC--ceEEeEEEecCCCCCCCcc--cEEECCCCCEEEEECCC-------
Confidence 457899999987766422 346777777665 44444332211 1011111 34499999988765421
Q ss_pred EEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcC
Q 011049 123 ILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 202 (494)
Q Consensus 123 ~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~ 202 (494)
......+|.++..+|+.+.+...... ..-....|+|||+.+++.... ...-.+|.++.+
T Consensus 280 ----------~~~~i~v~~~~~~~g~~~~~~~~~~g----------~~~~~~~~spdg~~l~~~~~~-~~~v~v~~~d~~ 338 (361)
T 3scy_A 280 ----------KADGVAIFKVDETNGTLTKVGYQLTG----------IHPRNFIITPNGKYLLVACRD-TNVIQIFERDQA 338 (361)
T ss_dssp ----------SSCEEEEEEECTTTCCEEEEEEEECS----------SCCCEEEECTTSCEEEEEETT-TTEEEEEEECTT
T ss_pred ----------CCCEEEEEEEcCCCCcEEEeeEecCC----------CCCceEEECCCCCEEEEEECC-CCCEEEEEEECC
Confidence 01111244444456665544332111 000124789999877765432 222346667777
Q ss_pred CCceeEe
Q 011049 203 LKKSSQI 209 (494)
Q Consensus 203 ~~~~~~l 209 (494)
+++.+.+
T Consensus 339 ~g~~~~~ 345 (361)
T 3scy_A 339 TGLLTDI 345 (361)
T ss_dssp TCCEEEC
T ss_pred CCcEeec
Confidence 7765544
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=97.94 E-value=4.1e-05 Score=73.79 Aligned_cols=36 Identities=14% Similarity=0.044 Sum_probs=31.7
Q ss_pred CcEEEEecChHHHHHHHHHHh--------------------------CCCceeEEEeCCCCC
Q 011049 344 SRIAVGGHSYGAFMTAHLLAH--------------------------APHLFCCGIARSGSY 379 (494)
Q Consensus 344 ~ri~i~G~S~GG~~a~~~~~~--------------------------~p~~~~a~v~~~~~~ 379 (494)
.++.|+||||||.++..++.. +|++++.+|.+++..
T Consensus 151 ~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i~tP~ 212 (431)
T 2hih_A 151 HPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTIATPH 212 (431)
T ss_dssp BCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEESCCT
T ss_pred CCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEEECCCC
Confidence 689999999999999998876 688999999988753
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=97.93 E-value=0.00025 Score=66.71 Aligned_cols=83 Identities=7% Similarity=-0.137 Sum_probs=50.5
Q ss_pred eeeeccCCCCCCCCCeeccc--cccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 19 IIYTQPAEPAEGEKPEILHK--LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~--~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
.||.+|. ++++.+.++. .......++|||||+ |++.+..+. ...|++++++++ +.+.+....... .
T Consensus 19 ~v~~~d~---~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~-~~~v~~~~~~~g--~~~~~~~~~~~~-----~ 86 (347)
T 3hfq_A 19 YQGTLDT---TAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDD-EGGIAAWQIDGQ--TAHKLNTVVAPG-----T 86 (347)
T ss_dssp EEEEEET---TTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETT-EEEEEEEEEETT--EEEEEEEEEEES-----C
T ss_pred EEEEEcC---CCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCC-CceEEEEEecCC--cEEEeeeeecCC-----C
Confidence 3555555 5666655432 223345678999999 666654322 568889888776 556665422221 2
Q ss_pred CC-ceeeCCCCCEEEEEE
Q 011049 97 SP-MMTRTSTGTNVIAKI 113 (494)
Q Consensus 97 ~~-~~~~spDG~~i~~~~ 113 (494)
.| .+.+||||++|++..
T Consensus 87 ~p~~~a~spdg~~l~~~~ 104 (347)
T 3hfq_A 87 PPAYVAVDEARQLVYSAN 104 (347)
T ss_dssp CCSEEEEETTTTEEEEEE
T ss_pred CCEEEEECCCCCEEEEEe
Confidence 23 234899999887765
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=97.93 E-value=7e-05 Score=71.10 Aligned_cols=37 Identities=22% Similarity=0.252 Sum_probs=30.6
Q ss_pred CCcEEEEecChHHHHHHHHHHh-------------------CC------CceeEEEeCCCCC
Q 011049 343 PSRIAVGGHSYGAFMTAHLLAH-------------------AP------HLFCCGIARSGSY 379 (494)
Q Consensus 343 ~~ri~i~G~S~GG~~a~~~~~~-------------------~p------~~~~a~v~~~~~~ 379 (494)
.+++.++||||||.++..++.+ +| ++++.+|.+++..
T Consensus 103 ~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V~sLV~i~tP~ 164 (387)
T 2dsn_A 103 GGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFVLSVTTIATPH 164 (387)
T ss_dssp TCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESCCT
T ss_pred CCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccceeEEEEECCCC
Confidence 4789999999999999999872 35 7889999887653
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=97.89 E-value=0.00055 Score=64.35 Aligned_cols=153 Identities=8% Similarity=-0.053 Sum_probs=75.1
Q ss_pred ceeeeccCCCCCCCCCeeccc---cccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHK---LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~---~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
+.|+++++ ++++.+.++. ........+|||||+.|++....++ .-.+|.++.+ + ..+.+........ .
T Consensus 63 ~~v~~~~~---~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~-~v~v~~~~~~-g--~~~~~~~~~~~~~--~ 133 (347)
T 3hfq_A 63 GGIAAWQI---DGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKG-TAEVMKIAAD-G--ALTLTDTVQHSGH--G 133 (347)
T ss_dssp EEEEEEEE---ETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTT-EEEEEEECTT-S--CEEEEEEEECCCC--C
T ss_pred ceEEEEEe---cCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCC-EEEEEEeCCC-C--CeeecceeecCCC--C
Confidence 57888887 6666666554 2233456789999999877653332 3344444332 2 3344333221110 0
Q ss_pred C------CCC-ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecC-CCceEEEEeeCcchhhhheee
Q 011049 95 P------GSP-MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDIN-TGSKERIWESNREKYFETAVA 166 (494)
Q Consensus 95 ~------~~~-~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~-~g~~~~l~~~~~~~~~~~~~~ 166 (494)
| ..+ .+.|||||+ +++... .. ..+.+++++ +|+...+........ ...
T Consensus 134 p~~~~~~~~~~~~~~spdg~-l~v~~~------------------~~--~~v~~~~~~~~g~~~~~~~~~~~~g-~~p-- 189 (347)
T 3hfq_A 134 PRPEQDGSHIHYTDLTPDNR-LAVIDL------------------GS--DKVYVYNVSDAGQLSEQSVLTMEAG-FGP-- 189 (347)
T ss_dssp SSTTCSSCCEEEEEECTTSC-EEEEET------------------TT--TEEEEEEECTTSCEEEEEEEECCTT-CCE--
T ss_pred CCccccCCCceEEEECCCCc-EEEEeC------------------CC--CEEEEEEECCCCcEEEeeeEEcCCC-CCC--
Confidence 0 011 245999999 554431 11 137777776 555443321110000 000
Q ss_pred eccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEe
Q 011049 167 LVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQI 209 (494)
Q Consensus 167 ~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~l 209 (494)
....|+|||+.+++.... ...-.+|.++..+++.+.+
T Consensus 190 -----~~~~~spdg~~l~v~~~~-~~~v~v~~~~~~~g~~~~~ 226 (347)
T 3hfq_A 190 -----RHLVFSPDGQYAFLAGEL-SSQIASLKYDTQTGAFTQL 226 (347)
T ss_dssp -----EEEEECTTSSEEEEEETT-TTEEEEEEEETTTTEEEEE
T ss_pred -----ceEEECCCCCEEEEEeCC-CCEEEEEEecCCCCceEEe
Confidence 124789999877765432 2112344444334554433
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=97.86 E-value=0.00018 Score=67.46 Aligned_cols=156 Identities=8% Similarity=-0.052 Sum_probs=85.7
Q ss_pred CccceeeeccCCCCCCCCCeecccccc--ccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc--
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDL--RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN-- 90 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~--~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~-- 90 (494)
+..+.|+++|+ ++++......... ....++|||||+.+++.... ...|+++++.++ +...........
T Consensus 18 ~~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~---~~~i~~~d~~t~--~~~~~~~~~~~~~~ 89 (349)
T 1jmx_B 18 NYPNNLHVVDV---ASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH---YGDIYGIDLDTC--KNTFHANLSSVPGE 89 (349)
T ss_dssp ETTTEEEEEET---TTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT---TTEEEEEETTTT--EEEEEEESCCSTTE
T ss_pred CCCCeEEEEEC---CCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC---CCcEEEEeCCCC--cEEEEEEccccccc
Confidence 34678999998 6666554443333 35678999999987766422 468999999876 433332221100
Q ss_pred ccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEE---EEeeCcchhhhheeee
Q 011049 91 VYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKER---IWESNREKYFETAVAL 167 (494)
Q Consensus 91 ~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~---l~~~~~~~~~~~~~~~ 167 (494)
....+.. +.|||||+++++....... ..+.+. .....++++|+++++... .......
T Consensus 90 ~~~~~~~--~~~spdg~~l~~~~~~~~~-------~~~~~~--~~~~~i~~~d~~~~~~~~~~~~~~~~~~--------- 149 (349)
T 1jmx_B 90 VGRSMYS--FAISPDGKEVYATVNPTQR-------LNDHYV--VKPPRLEVFSTADGLEAKPVRTFPMPRQ--------- 149 (349)
T ss_dssp EEECSSC--EEECTTSSEEEEEEEEEEE-------CSSCEE--ECCCEEEEEEGGGGGGBCCSEEEECCSS---------
T ss_pred ccccccc--eEECCCCCEEEEEcccccc-------cccccc--cCCCeEEEEECCCccccceeeeccCCCc---------
Confidence 0001122 3389999988887632000 000000 001258888988754321 1111110
Q ss_pred ccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeE
Q 011049 168 VFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 208 (494)
Q Consensus 168 ~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~ 208 (494)
-....|+|||+ +++ . + ..++++++++++...
T Consensus 150 ---~~~~~~s~dg~-l~~-~-~----~~i~~~d~~~~~~~~ 180 (349)
T 1jmx_B 150 ---VYLMRAADDGS-LYV-A-G----PDIYKMDVKTGKYTV 180 (349)
T ss_dssp ---CCCEEECTTSC-EEE-E-S----SSEEEECTTTCCEEE
T ss_pred ---ccceeECCCCc-EEE-c-c----CcEEEEeCCCCceec
Confidence 01235899998 554 2 2 238999988776544
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00064 Score=63.46 Aligned_cols=149 Identities=7% Similarity=-0.012 Sum_probs=79.1
Q ss_pred ccceeeeccCCCCCCCCCeec--cccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 16 PRDIIYTQPAEPAEGEKPEIL--HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~l--t~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
..+.|+++++.. +++.+.+ .........++|||||+.|++....++ .-.+|.++.+++ +.+.+.......
T Consensus 13 ~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~-~v~~~~~~~~~~--~~~~~~~~~~~~--- 84 (343)
T 1ri6_A 13 ESQQIHVWNLNH--EGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEF-RVLAYRIAPDDG--ALTFAAESALPG--- 84 (343)
T ss_dssp GGTEEEEEEECT--TSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTT-EEEEEEECTTTC--CEEEEEEEECSS---
T ss_pred CCCeEEEEEECC--CCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCC-eEEEEEecCCCC--ceeeccccccCC---
Confidence 356788888721 2332322 223334456789999999887654322 344555655465 555554333221
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEE-EEeeCcchhhhheeeeccCCC
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKER-IWESNREKYFETAVALVFGQG 172 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~~~~~s~~~ 172 (494)
.+. .+.|+|||+++++.... .. .+.++|++.+.... +...... ..-.
T Consensus 85 ~~~--~~~~s~dg~~l~~~~~~------------------~~--~i~~~d~~~~~~~~~~~~~~~~----------~~~~ 132 (343)
T 1ri6_A 85 SLT--HISTDHQGQFVFVGSYN------------------AG--NVSVTRLEDGLPVGVVDVVEGL----------DGCH 132 (343)
T ss_dssp CCS--EEEECTTSSEEEEEETT------------------TT--EEEEEEEETTEEEEEEEEECCC----------TTBC
T ss_pred CCc--EEEEcCCCCEEEEEecC------------------CC--eEEEEECCCCccccccccccCC----------CCce
Confidence 112 24499999988776521 11 36677764332211 1111111 0012
Q ss_pred cccccccCcEEEEEEecCCCCCeEEEEEcCC-Ccee
Q 011049 173 EEDINLNQLKILTSKESKTEITQYHILSWPL-KKSS 207 (494)
Q Consensus 173 ~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~-~~~~ 207 (494)
...|+||++.+++.... ...++++++.+ ++..
T Consensus 133 ~~~~s~dg~~l~~~~~~---~~~v~~~d~~~~~~~~ 165 (343)
T 1ri6_A 133 SANISPDNRTLWVPALK---QDRICLFTVSDDGHLV 165 (343)
T ss_dssp CCEECTTSSEEEEEEGG---GTEEEEEEECTTSCEE
T ss_pred EEEECCCCCEEEEecCC---CCEEEEEEecCCCcee
Confidence 34789999877665422 24688888766 5444
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00056 Score=66.43 Aligned_cols=150 Identities=11% Similarity=0.026 Sum_probs=84.7
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
.+.|+++|+ .+++.............++|+|||+.|+++... ...+++.+++++ +.......... +.
T Consensus 282 dg~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~---~~~v~v~d~~~~--~~~~~~~~~~~-----~~ 348 (433)
T 3bws_A 282 GGRLGIYSM---DKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMC---CSKIEVYDLKEK--KVQKSIPVFDK-----PN 348 (433)
T ss_dssp CEEEEEEET---TTTEEEEEEEEEECEEEEEECSSTTEEEEEETT---TTEEEEEETTTT--EEEEEEECSSS-----EE
T ss_pred CCeEEEEEC---CCCcEEeeccCCCCcceEEECCCCCEEEEEecC---CCEEEEEECCCC--cEEEEecCCCC-----CC
Confidence 568889998 666655554434445578999999988876533 457888998866 43333322111 11
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.+.|+|||+.++.............+ ..| .....++++|+.+++.......... . ....|
T Consensus 349 --~~~~s~dg~~l~~~~~~~~~~~~~~~--~~g----~~dg~v~~~d~~~~~~~~~~~~~~~-----~-------~~~~~ 408 (433)
T 3bws_A 349 --TIALSPDGKYLYVSCRGPNHPTEGYL--KKG----LVLGKVYVIDTTTDTVKEFWEAGNQ-----P-------TGLDV 408 (433)
T ss_dssp --EEEECTTSSEEEEEECCCCCTTTCTT--SCC----SSCCEEEEEETTTTEEEEEEECSSS-----E-------EEEEE
T ss_pred --eEEEcCCCCEEEEEecCCCccccccc--ccc----ccceEEEEEECCCCcEEEEecCCCC-----C-------ceEEE
Confidence 24499999988776532100000000 000 0012499999998876554443211 1 12378
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcC
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWP 202 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~ 202 (494)
+||++.+++.... ...+.+++++
T Consensus 409 s~dg~~l~~~~~~---d~~i~v~~~~ 431 (433)
T 3bws_A 409 SPDNRYLVISDFL---DHQIRVYRRD 431 (433)
T ss_dssp CTTSCEEEEEETT---TTEEEEEEET
T ss_pred cCCCCEEEEEECC---CCeEEEEEec
Confidence 8999877654431 2356665543
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00024 Score=67.30 Aligned_cols=82 Identities=13% Similarity=0.060 Sum_probs=48.3
Q ss_pred cceecCCCceEEEEeee-eccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEE
Q 011049 45 SVSWCDDSLALVNETWY-KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYI 123 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~-~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~ 123 (494)
.++|||||+.|+..... .. .-.+|.++..++ +.+.+....... .|. .+.|||||++|++...
T Consensus 263 ~i~~spdg~~l~v~~~~~~~-~i~v~~~~~~~g--~~~~~~~~~~g~---~~~--~~~~spdg~~l~~~~~--------- 325 (361)
T 3scy_A 263 DIHLSPDGKYLYASNRLKAD-GVAIFKVDETNG--TLTKVGYQLTGI---HPR--NFIITPNGKYLLVACR--------- 325 (361)
T ss_dssp EEEECTTSSEEEEEECSSSC-EEEEEEECTTTC--CEEEEEEEECSS---CCC--EEEECTTSCEEEEEET---------
T ss_pred cEEECCCCCEEEEECCCCCC-EEEEEEEcCCCC--cEEEeeEecCCC---CCc--eEEECCCCCEEEEEEC---------
Confidence 67899999987655433 22 345666665555 545554433211 122 2449999998877642
Q ss_pred EEccCCCCCCCCCCceEeeecCCCceEEE
Q 011049 124 LLNGRGFTPEGNIPFLDLFDINTGSKERI 152 (494)
Q Consensus 124 ~~~~~g~~~~~~~~~l~~~d~~~g~~~~l 152 (494)
......+|.+|.++|+.+.+
T Consensus 326 ---------~~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 326 ---------DTNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp ---------TTTEEEEEEECTTTCCEEEC
T ss_pred ---------CCCCEEEEEEECCCCcEeec
Confidence 12223466688888876543
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=97.58 E-value=0.0037 Score=59.19 Aligned_cols=64 Identities=11% Similarity=0.047 Sum_probs=37.1
Q ss_pred ccccceecCCCceEEEEeeeeccceEEEEEcCC-CCCCCceEeeecccccccCCCCCC-ceeeCCCCCEEEEEE
Q 011049 42 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPG-SKDVAPRVLFDRVFENVYSDPGSP-MMTRTSTGTNVIAKI 113 (494)
Q Consensus 42 ~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~-~g~~~~~~lt~~~~~~~~~~~~~~-~~~~spDG~~i~~~~ 113 (494)
....++|||||+.|+.. ... ...|++++++ ++ +.+.+......... ..| -+.|||||+++++..
T Consensus 146 ~~~~~~~spdG~~l~~~-~~~--~~~v~~~~~~~~g--~~~~~~~~~~~~~g---~~p~~~~~spdg~~l~v~~ 211 (365)
T 1jof_A 146 GIHGMVFDPTETYLYSA-DLT--ANKLWTHRKLASG--EVELVGSVDAPDPG---DHPRWVAMHPTGNYLYALM 211 (365)
T ss_dssp CEEEEEECTTSSEEEEE-ETT--TTEEEEEEECTTS--CEEEEEEEECSSTT---CCEEEEEECTTSSEEEEEE
T ss_pred cceEEEECCCCCEEEEE-cCC--CCEEEEEEECCCC--CEEEeeeEecCCCC---CCCCEeEECCCCCEEEEEE
Confidence 34568899999987543 332 3578888887 55 44433322110000 122 134899999887654
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=97.57 E-value=0.0016 Score=60.74 Aligned_cols=159 Identities=6% Similarity=-0.060 Sum_probs=80.3
Q ss_pred ccceeeeccCCCCCC-CCCeecc-----c-cccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccc
Q 011049 16 PRDIIYTQPAEPAEG-EKPEILH-----K-LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVF 88 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~-~~~~~lt-----~-~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~ 88 (494)
..+.|+++++ .. ++...+. . ........+|+|||+.|++.... ...+.+++++...++.+.+.....
T Consensus 149 ~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~---~~~i~~~~~~~~~g~~~~~~~~~~ 222 (343)
T 1ri6_A 149 KQDRICLFTV---SDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL---NSSVDVWELKDPHGNIECVQTLDM 222 (343)
T ss_dssp GGTEEEEEEE---CTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT---TTEEEEEESSCTTSCCEEEEEEEC
T ss_pred CCCEEEEEEe---cCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC---CCEEEEEEecCCCCcEEEEeeccc
Confidence 3467888887 43 4443222 1 11122346799999988776532 345677776432224433322111
Q ss_pred -ccccCCCCCC-ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecC--CCceEEEEeeCcchhhhhe
Q 011049 89 -ENVYSDPGSP-MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDIN--TGSKERIWESNREKYFETA 164 (494)
Q Consensus 89 -~~~~~~~~~~-~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~--~g~~~~l~~~~~~~~~~~~ 164 (494)
...+.....+ .+.|+|||+++++.... .. .+.++|++ +++.+.+......
T Consensus 223 ~~~~~~~~~~~~~i~~s~dg~~l~v~~~~------------------~~--~i~v~d~~~~~~~~~~~~~~~~~------ 276 (343)
T 1ri6_A 223 MPENFSDTRWAADIHITPDGRHLYACDRT------------------AS--LITVFSVSEDGSVLSKEGFQPTE------ 276 (343)
T ss_dssp SCTTCCSCCCEEEEEECTTSSEEEEEETT------------------TT--EEEEEEECTTSCCEEEEEEEECS------
T ss_pred cCccccccCCccceEECCCCCEEEEEecC------------------CC--EEEEEEEcCCCCceEEeeeecCC------
Confidence 1100000111 25599999988765411 11 36677766 5544443221111
Q ss_pred eeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 165 VALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 165 ~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
..-....|+||++.+++.... ...-.+|.++.++++.+.+..
T Consensus 277 ----~~~~~~~~s~dg~~l~~~~~~-~~~v~v~~~d~~~g~~~~~~~ 318 (343)
T 1ri6_A 277 ----TQPRGFNVDHSGKYLIAAGQK-SHHISVYEIVGEQGLLHEKGR 318 (343)
T ss_dssp ----SSCCCEEECTTSSEEEEECTT-TCEEEEEEEETTTTEEEEEEE
T ss_pred ----CccceEEECCCCCEEEEecCC-CCeEEEEEEcCCCceeeEccc
Confidence 001234789999877765432 223346666777776665553
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=0.0014 Score=57.95 Aligned_cols=150 Identities=15% Similarity=0.043 Sum_probs=78.1
Q ss_pred EEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCccc-CCCCccCCC---CchhHHHHHhCCeEEE
Q 011049 226 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVR-GSPNEFSGM---TPTSSLIFLARRFAVL 301 (494)
Q Consensus 226 ~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~l~~~G~~v~ 301 (494)
.+.+....|..+..|++.... ++. ..|+++|++|||.++.-..+.+. -+|-.+..- .......|... ..++
T Consensus 23 y~~v~~~~~~~lFywf~es~~-~~~---~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~-anvl 97 (255)
T 1whs_A 23 YITVDEGAGRSLFYLLQEAPE-DAQ---PAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKV-ANVL 97 (255)
T ss_dssp EEEEETTTTEEEEEEEECCCG-GGC---SCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGGT-SEEE
T ss_pred EEECCCCCCcEEEEEEEEecC-CCC---CCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCccccccc-CCEE
Confidence 455554467788888886543 222 27999999999854321100000 011111000 00000011222 3344
Q ss_pred eCCCCCCCCCCCCCCCc----hhHHHHHHHHHHHHHH-HHHcCCCCCCcEEEEecChHHHHHHHHHHhC------CCcee
Q 011049 302 AGPSIPIIGEGDKLPND----RFVEQLVSSAEAAVEE-VVRRGVADPSRIAVGGHSYGAFMTAHLLAHA------PHLFC 370 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~~----~~~~~~~~d~~~~v~~-l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~------p~~~~ 370 (494)
..+..-..|+....... .-.+..+.|+...++. +.+.+.....++.|+|.||||..+..+|..- .=.++
T Consensus 98 fiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLk 177 (255)
T 1whs_A 98 FLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLK 177 (255)
T ss_dssp EECCSTTSTTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEE
T ss_pred EEecCCCCccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccc
Confidence 43432233443222111 1234556777777754 4444444557899999999999887766421 13578
Q ss_pred EEEeCCCCCC
Q 011049 371 CGIARSGSYN 380 (494)
Q Consensus 371 a~v~~~~~~~ 380 (494)
+++..+|+.+
T Consensus 178 Gi~ign~~~d 187 (255)
T 1whs_A 178 GFMVGNGLID 187 (255)
T ss_dssp EEEEEEECCB
T ss_pred eEEecCCccC
Confidence 8888888765
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0017 Score=60.64 Aligned_cols=58 Identities=12% Similarity=-0.003 Sum_probs=37.1
Q ss_pred ccceeeeccCCCCCCCCCeeccccc-------cccccceecCCCceEEEEeee--------eccceEEEEEcCCCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLD-------LRFRSVSWCDDSLALVNETWY--------KTSQTRTWLVCPGSK 76 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~-------~~~~~p~wspDg~~i~f~~~~--------~~~~~~~~~~~~~~g 76 (494)
..+.|+++|+ ++++........ .....++|||||+.|++.... ......|+++++.++
T Consensus 63 ~~~~i~~~d~---~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 135 (349)
T 1jmx_B 63 HYGDIYGIDL---DTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG 135 (349)
T ss_dssp TTTEEEEEET---TTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG
T ss_pred CCCcEEEEeC---CCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCc
Confidence 3567888888 666544332221 123567899999998887632 001368999998864
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0023 Score=59.30 Aligned_cols=143 Identities=10% Similarity=0.024 Sum_probs=84.2
Q ss_pred CccceeeeccCCCCCCCCCee---ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccc
Q 011049 15 SPRDIIYTQPAEPAEGEKPEI---LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV 91 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~---lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~ 91 (494)
+..+.|.++++ ..++... +...........|+|||+.|+..+. ...+++.++.++ +..........
T Consensus 116 ~~d~~i~~~d~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----dg~v~~~d~~~~--~~~~~~~~~~~-- 184 (337)
T 1gxr_A 116 GEASTLSIWDL---AAPTPRIKAELTSSAPACYALAISPDSKVCFSCCS----DGNIAVWDLHNQ--TLVRQFQGHTD-- 184 (337)
T ss_dssp ESSSEEEEEEC---CCC--EEEEEEECSSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTT--EEEEEECCCSS--
T ss_pred cCCCcEEEEEC---CCCCcceeeecccCCCceEEEEECCCCCEEEEEeC----CCcEEEEeCCCC--ceeeeeecccC--
Confidence 34568889988 5555322 3333344557789999998876542 346888888765 33332221111
Q ss_pred cCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCC
Q 011049 92 YSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQ 171 (494)
Q Consensus 92 ~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~ 171 (494)
.-..+.|+|||+.++.... ++ .+.++|+.+++.......... .
T Consensus 185 ----~i~~~~~~~~~~~l~~~~~------------------dg---~i~~~d~~~~~~~~~~~~~~~-----v------- 227 (337)
T 1gxr_A 185 ----GASCIDISNDGTKLWTGGL------------------DN---TVRSWDLREGRQLQQHDFTSQ-----I------- 227 (337)
T ss_dssp ----CEEEEEECTTSSEEEEEET------------------TS---EEEEEETTTTEEEEEEECSSC-----E-------
T ss_pred ----ceEEEEECCCCCEEEEEec------------------CC---cEEEEECCCCceEeeecCCCc-----e-------
Confidence 1112449999998876541 11 388889888765544332221 1
Q ss_pred CcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEe
Q 011049 172 GEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQI 209 (494)
Q Consensus 172 ~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~l 209 (494)
....|+|++..+++... ...+.+++..+.+...+
T Consensus 228 ~~~~~s~~~~~l~~~~~----~~~i~~~~~~~~~~~~~ 261 (337)
T 1gxr_A 228 FSLGYCPTGEWLAVGME----SSNVEVLHVNKPDKYQL 261 (337)
T ss_dssp EEEEECTTSSEEEEEET----TSCEEEEETTSSCEEEE
T ss_pred EEEEECCCCCEEEEEcC----CCcEEEEECCCCCeEEE
Confidence 12378888887765432 24688888877665444
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00066 Score=66.60 Aligned_cols=59 Identities=27% Similarity=0.309 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC
Q 011049 321 VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 379 (494)
Q Consensus 321 ~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 379 (494)
.++.+.|+...++++.+.......+++++|.||||.+|+++-.++|++|.++++-++++
T Consensus 105 ~eQALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSApv 163 (472)
T 4ebb_A 105 VEQALADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPV 163 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCT
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccce
Confidence 56789999999999987654556789999999999999999999999999999887653
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0027 Score=59.01 Aligned_cols=141 Identities=14% Similarity=0.062 Sum_probs=82.3
Q ss_pred CccceeeeccCCCCCCCCCe-eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 15 SPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~-~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
+..+.|.++|+ ..++.. .+..........+|||||+.|+..+ ....+.+.++..+ ...........
T Consensus 99 s~D~~i~lWd~---~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~----~dg~v~i~~~~~~--~~~~~~~~~~~---- 165 (321)
T 3ow8_A 99 SLDAHIRLWDL---ENGKQIKSIDAGPVDAWTLAFSPDSQYLATGT----HVGKVNIFGVESG--KKEYSLDTRGK---- 165 (321)
T ss_dssp ETTSEEEEEET---TTTEEEEEEECCTTCCCCEEECTTSSEEEEEC----TTSEEEEEETTTC--SEEEEEECSSS----
T ss_pred eCCCcEEEEEC---CCCCEEEEEeCCCccEEEEEECCCCCEEEEEc----CCCcEEEEEcCCC--ceeEEecCCCc----
Confidence 34568888888 555433 3444444556789999999888654 2456777787765 33332222211
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCc
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 173 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~ 173 (494)
.-..+.|+|||+.|+.... ++ .+.++|+.+++.......... .-..
T Consensus 166 --~v~~~~~spdg~~lasg~~------------------dg---~i~iwd~~~~~~~~~~~~h~~-----------~v~~ 211 (321)
T 3ow8_A 166 --FILSIAYSPDGKYLASGAI------------------DG---IINIFDIATGKLLHTLEGHAM-----------PIRS 211 (321)
T ss_dssp --CEEEEEECTTSSEEEEEET------------------TS---CEEEEETTTTEEEEEECCCSS-----------CCCE
T ss_pred --eEEEEEECCCCCEEEEEcC------------------CC---eEEEEECCCCcEEEEEcccCC-----------ceeE
Confidence 0112349999998887641 12 288889988865443332111 0123
Q ss_pred ccccccCcEEEEEEecCCCCCeEEEEEcCCCce
Q 011049 174 EDINLNQLKILTSKESKTEITQYHILSWPLKKS 206 (494)
Q Consensus 174 ~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~ 206 (494)
..|+||+..++. .+. -..+.+++..+++.
T Consensus 212 l~~spd~~~l~s-~s~---dg~i~iwd~~~~~~ 240 (321)
T 3ow8_A 212 LTFSPDSQLLVT-ASD---DGYIKIYDVQHANL 240 (321)
T ss_dssp EEECTTSCEEEE-ECT---TSCEEEEETTTCCE
T ss_pred EEEcCCCCEEEE-EcC---CCeEEEEECCCcce
Confidence 478899876543 222 24577778766543
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=97.43 E-value=0.0047 Score=57.21 Aligned_cols=139 Identities=7% Similarity=-0.063 Sum_probs=84.1
Q ss_pred ccceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
..+.|+++++ ..++... +...........|+|||+.|+..+ ....+++.++..+ +..........
T Consensus 161 ~dg~v~~~d~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----~dg~i~~~d~~~~--~~~~~~~~~~~----- 226 (337)
T 1gxr_A 161 SDGNIAVWDL---HNQTLVRQFQGHTDGASCIDISNDGTKLWTGG----LDNTVRSWDLREG--RQLQQHDFTSQ----- 226 (337)
T ss_dssp TTSCEEEEET---TTTEEEEEECCCSSCEEEEEECTTSSEEEEEE----TTSEEEEEETTTT--EEEEEEECSSC-----
T ss_pred CCCcEEEEeC---CCCceeeeeecccCceEEEEECCCCCEEEEEe----cCCcEEEEECCCC--ceEeeecCCCc-----
Confidence 4568889988 5555443 333344556788999999888654 2457888888866 43333322211
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcc
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEE 174 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~ 174 (494)
-..+.|+|||+.++.... ++ .+.++|+.+++...+...... . ...
T Consensus 227 --v~~~~~s~~~~~l~~~~~------------------~~---~i~~~~~~~~~~~~~~~~~~~-----v-------~~~ 271 (337)
T 1gxr_A 227 --IFSLGYCPTGEWLAVGME------------------SS---NVEVLHVNKPDKYQLHLHESC-----V-------LSL 271 (337)
T ss_dssp --EEEEEECTTSSEEEEEET------------------TS---CEEEEETTSSCEEEECCCSSC-----E-------EEE
T ss_pred --eEEEEECCCCCEEEEEcC------------------CC---cEEEEECCCCCeEEEcCCccc-----e-------eEE
Confidence 112448999998887642 11 388888888765443322211 1 123
Q ss_pred cccccCcEEEEEEecCCCCCeEEEEEcCCCcee
Q 011049 175 DINLNQLKILTSKESKTEITQYHILSWPLKKSS 207 (494)
Q Consensus 175 ~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~ 207 (494)
.|+|+++.++.... -..+.++++.+++..
T Consensus 272 ~~~~~~~~l~~~~~----dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 272 KFAYCGKWFVSTGK----DNLLNAWRTPYGASI 300 (337)
T ss_dssp EECTTSSEEEEEET----TSEEEEEETTTCCEE
T ss_pred EECCCCCEEEEecC----CCcEEEEECCCCeEE
Confidence 78888886654332 356888887776544
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0016 Score=61.85 Aligned_cols=146 Identities=10% Similarity=0.028 Sum_probs=77.4
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
.+.|.++|+ +.++..............+|||||+.|+..+. ..+.+++...+ ............. .
T Consensus 156 d~~i~iwd~---~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~-----~~~~~~~~~~~--~~~~~~~~~~~~~----~ 221 (365)
T 4h5i_A 156 PAIMRIIDP---SDLTEKFEIETRGEVKDLHFSTDGKVVAYITG-----SSLEVISTVTG--SCIARKTDFDKNW----S 221 (365)
T ss_dssp SCEEEEEET---TTTEEEEEEECSSCCCEEEECTTSSEEEEECS-----SCEEEEETTTC--CEEEEECCCCTTE----E
T ss_pred CCEEEEeEC---CCCcEEEEeCCCCceEEEEEccCCceEEeccc-----eeEEEEEeccC--cceeeeecCCCCC----C
Confidence 357888988 66665554445555678899999999887652 23455555544 2222111111100 0
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEee--CcchhhhheeeeccCCCcc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES--NREKYFETAVALVFGQGEE 174 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~--~~~~~~~~~~~~~s~~~~~ 174 (494)
-..+.|+|||+.++..+.. + .....++.+++..+....+... .+. ...+ ...
T Consensus 222 v~~v~fspdg~~l~~~s~d-------------~----~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~V-------~~~ 275 (365)
T 4h5i_A 222 LSKINFIADDTVLIAASLK-------------K----GKGIVLTKISIKSGNTSVLRSKQVTNR--FKGI-------TSM 275 (365)
T ss_dssp EEEEEEEETTEEEEEEEES-------------S----SCCEEEEEEEEETTEEEEEEEEEEESS--CSCE-------EEE
T ss_pred EEEEEEcCCCCEEEEEecC-------------C----cceeEEeecccccceecceeeeeecCC--CCCe-------EeE
Confidence 0123489999988776531 1 1112355666655543222110 000 0001 123
Q ss_pred cccccCcEEEEEEecCCCCCeEEEEEcCCCce
Q 011049 175 DINLNQLKILTSKESKTEITQYHILSWPLKKS 206 (494)
Q Consensus 175 ~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~ 206 (494)
.|||||+.++.... -..|.+++..+++.
T Consensus 276 ~~Spdg~~lasgs~----D~~V~iwd~~~~~~ 303 (365)
T 4h5i_A 276 DVDMKGELAVLASN----DNSIALVKLKDLSM 303 (365)
T ss_dssp EECTTSCEEEEEET----TSCEEEEETTTTEE
T ss_pred EECCCCCceEEEcC----CCEEEEEECCCCcE
Confidence 78999986654332 24588888877654
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0054 Score=58.09 Aligned_cols=75 Identities=9% Similarity=-0.092 Sum_probs=39.7
Q ss_pred eeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecC-CCceEEEEeeC----cchhhhheeeeccCCCcc
Q 011049 100 MTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDIN-TGSKERIWESN----REKYFETAVALVFGQGEE 174 (494)
Q Consensus 100 ~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~-~g~~~~l~~~~----~~~~~~~~~~~~s~~~~~ 174 (494)
+.|||||++++.... + ...|+++|++ +|+.+.+.... +. .+ ...
T Consensus 150 ~~~spdG~~l~~~~~-------------------~-~~~v~~~~~~~~g~~~~~~~~~~~~~g~----~p-------~~~ 198 (365)
T 1jof_A 150 MVFDPTETYLYSADL-------------------T-ANKLWTHRKLASGEVELVGSVDAPDPGD----HP-------RWV 198 (365)
T ss_dssp EEECTTSSEEEEEET-------------------T-TTEEEEEEECTTSCEEEEEEEECSSTTC----CE-------EEE
T ss_pred EEECCCCCEEEEEcC-------------------C-CCEEEEEEECCCCCEEEeeeEecCCCCC----CC-------CEe
Confidence 348999998765431 1 1147788887 67654432211 11 01 123
Q ss_pred cccccCcEEEEEEecCCCCCeEEEEEcCCCce
Q 011049 175 DINLNQLKILTSKESKTEITQYHILSWPLKKS 206 (494)
Q Consensus 175 ~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~ 206 (494)
.|+|||+.+++.... ...-.+|.++.++++.
T Consensus 199 ~~spdg~~l~v~~~~-~~~v~v~~~~~~~g~~ 229 (365)
T 1jof_A 199 AMHPTGNYLYALMEA-GNRICEYVIDPATHMP 229 (365)
T ss_dssp EECTTSSEEEEEETT-TTEEEEEEECTTTCCE
T ss_pred EECCCCCEEEEEECC-CCeEEEEEEeCCCCcE
Confidence 789999887665432 1112344444445553
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0067 Score=56.29 Aligned_cols=139 Identities=9% Similarity=0.055 Sum_probs=78.8
Q ss_pred ccceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
..+.|.++++ +.++... +..........+|||||+.|+..+. ...|.+.++.++ +. +....+...
T Consensus 142 ~dg~v~i~~~---~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~----dg~i~iwd~~~~--~~--~~~~~~h~~--- 207 (321)
T 3ow8_A 142 HVGKVNIFGV---ESGKKEYSLDTRGKFILSIAYSPDGKYLASGAI----DGIINIFDIATG--KL--LHTLEGHAM--- 207 (321)
T ss_dssp TTSEEEEEET---TTCSEEEEEECSSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTT--EE--EEEECCCSS---
T ss_pred CCCcEEEEEc---CCCceeEEecCCCceEEEEEECCCCCEEEEEcC----CCeEEEEECCCC--cE--EEEEcccCC---
Confidence 4567778887 5444332 3333334557899999999886542 345777888765 33 222222110
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcc
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEE 174 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~ 174 (494)
.-..+.|+|||+.|+.... ++ .+.++|+.+++.......... .. ...
T Consensus 208 -~v~~l~~spd~~~l~s~s~------------------dg---~i~iwd~~~~~~~~~~~~h~~----~v-------~~~ 254 (321)
T 3ow8_A 208 -PIRSLTFSPDSQLLVTASD------------------DG---YIKIYDVQHANLAGTLSGHAS----WV-------LNV 254 (321)
T ss_dssp -CCCEEEECTTSCEEEEECT------------------TS---CEEEEETTTCCEEEEECCCSS----CE-------EEE
T ss_pred -ceeEEEEcCCCCEEEEEcC------------------CC---eEEEEECCCcceeEEEcCCCC----ce-------EEE
Confidence 1113459999997765431 12 288888888765443332111 01 123
Q ss_pred cccccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 175 DINLNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 175 ~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
.|+|++..++.. +. -..+.++++.+++
T Consensus 255 ~~sp~~~~l~s~-s~---D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 255 AFCPDDTHFVSS-SS---DKSVKVWDVGTRT 281 (321)
T ss_dssp EECTTSSEEEEE-ET---TSCEEEEETTTTE
T ss_pred EECCCCCEEEEE-eC---CCcEEEEeCCCCE
Confidence 788988765543 22 2457777776654
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0039 Score=59.32 Aligned_cols=106 Identities=8% Similarity=-0.134 Sum_probs=59.8
Q ss_pred eeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeee------eccceEEEEEcCCCCCCCceEeeecccccc-
Q 011049 19 IIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY------KTSQTRTWLVCPGSKDVAPRVLFDRVFENV- 91 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~------~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~- 91 (494)
.|+++|. +.++...-...... ..+++||||+.+++.... ....+.|.++|+.+. +...-..-.+...
T Consensus 48 ~v~v~D~---~t~~~~~~i~~g~~-p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~--~~~~~i~~~~~~~~ 121 (373)
T 2mad_H 48 QQWVLDA---GSGSILGHVNGGFL-PNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF--LPIADIELPDAPRF 121 (373)
T ss_pred EEEEEEC---CCCeEEEEecCCCC-CCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC--cEEEEEECCCcccc
Confidence 6677777 55554332222222 388999999998876532 112356889998765 3222111110000
Q ss_pred --cCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEE
Q 011049 92 --YSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI 152 (494)
Q Consensus 92 --~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l 152 (494)
...|.... +||||+++++.... ....|.++| ++++....
T Consensus 122 ~~g~~p~~~~--~spDG~~l~v~n~~-------------------~~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 122 DVGPYSWMNA--NTPNNADLLFFQFA-------------------AGPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred ccCCCccceE--ECCCCCEEEEEecC-------------------CCCeEEEEE-CCCCEEeE
Confidence 01234344 89999998876421 112488899 88876443
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0061 Score=59.14 Aligned_cols=146 Identities=12% Similarity=-0.007 Sum_probs=73.4
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCccc-CCCCccCCC---CchhHHHHHhCCeEEEeCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVR-GSPNEFSGM---TPTSSLIFLARRFAVLAGP 304 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~l~~~G~~v~~~~ 304 (494)
++..++..+..|++...+ ++. ..|+|+++||||.++.-. +.+. -+|-.+..- .......|. +-..++..|
T Consensus 26 v~v~~~~~lfy~f~~s~~-~~~---~~Pl~lwlnGGPG~Ss~~-g~~~e~GP~~~~~~~~~l~~n~~sw~-~~~~~lfiD 99 (452)
T 1ivy_A 26 LKSSGSKHLHYWFVESQK-DPE---NSPVVLWLNGGPGCSSLD-GLLTEHGPFLVQPDGVTLEYNPYSWN-LIANVLYLE 99 (452)
T ss_dssp EECSTTEEEEEEEECCSS-CGG---GSCEEEEECCTTTBCTHH-HHHTTTSSEEECTTSSCEEECTTCGG-GSSEEEEEC
T ss_pred EeeCCCCeEEEEEEEcCC-CCC---CCCEEEEECCCCcHHHHH-HHHHhcCCcEEeCCCceeeeCCCccc-ccccEEEEe
Confidence 343456788888775443 222 279999999998543211 0000 011111000 000000111 223455545
Q ss_pred CCCCCCCCCCCCC--chhHHHHHHHHHHHH-HHHHHcCCCCCCcEEEEecChHHHHHHHHHHh----CCCceeEEEeCCC
Q 011049 305 SIPIIGEGDKLPN--DRFVEQLVSSAEAAV-EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH----APHLFCCGIARSG 377 (494)
Q Consensus 305 ~~~~~g~g~~~~~--~~~~~~~~~d~~~~v-~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~----~p~~~~a~v~~~~ 377 (494)
..-..|+...... .......+.|+..++ +|+.+.+.....++.|+|+||||..+..+|.. .+-.+++++..+|
T Consensus 100 qP~GtGfS~~~~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign~ 179 (452)
T 1ivy_A 100 SPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNG 179 (452)
T ss_dssp CSTTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESC
T ss_pred cCCCCCcCCcCCCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecCC
Confidence 3222333221111 111133445544444 55555434456789999999999965555442 3457899999988
Q ss_pred CCC
Q 011049 378 SYN 380 (494)
Q Consensus 378 ~~~ 380 (494)
+.+
T Consensus 180 ~~d 182 (452)
T 1ivy_A 180 LSS 182 (452)
T ss_dssp CSB
T ss_pred ccC
Confidence 765
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0078 Score=56.98 Aligned_cols=112 Identities=11% Similarity=0.035 Sum_probs=62.4
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeee------ccceEEEEEcCCCCCCCceE-eeecccc
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYK------TSQTRTWLVCPGSKDVAPRV-LFDRVFE 89 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~------~~~~~~~~~~~~~g~~~~~~-lt~~~~~ 89 (494)
.+.|+++|. +.++...-......- .+++||||+.++...... .+.+.|.++|+.+. +... +.-..+.
T Consensus 58 ~~~V~ViD~---~t~~v~~~I~vG~~P-~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~--~v~~~I~v~~g~ 131 (386)
T 3sjl_D 58 VTQQFVIDG---EAGRVIGMIDGGFLP-NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL--LPTADIELPDAP 131 (386)
T ss_dssp SEEEEEEET---TTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC--CEEEEEEETTCC
T ss_pred CCEEEEEEC---CCCeEEEEEECCCCC-cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC--eEEEEEECCCcc
Confidence 367888887 555543322222222 489999999987765421 12457999999876 3322 2111100
Q ss_pred cccCCCCCC-ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEe
Q 011049 90 NVYSDPGSP-MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE 154 (494)
Q Consensus 90 ~~~~~~~~~-~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~ 154 (494)
..... ..| .+.+||||+++++.... ....+.++|+.+++......
T Consensus 132 r~~~g-~~P~~~a~spDGk~lyVan~~-------------------~~~~VsVID~~t~~vv~tI~ 177 (386)
T 3sjl_D 132 RFLVG-TYPWMTSLTPDGKTLLFYQFS-------------------PAPAVGVVDLEGKAFKRMLD 177 (386)
T ss_dssp CCCBS-CCGGGEEECTTSSEEEEEECS-------------------SSCEEEEEETTTTEEEEEEE
T ss_pred ccccC-CCCceEEEcCCCCEEEEEEcC-------------------CCCeEEEEECCCCcEEEEEE
Confidence 00000 112 23389999988765311 01138889999887655443
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.027 Score=53.69 Aligned_cols=150 Identities=7% Similarity=-0.052 Sum_probs=89.8
Q ss_pred CCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
...+..|+.+++ +++..+.+.........++|.++++.|+++-. ....|++++++++ ..+.+..... .
T Consensus 92 ~~~~~~I~~i~~---~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~---~~~~I~r~~~~g~--~~~~~~~~~~----~ 159 (386)
T 3v65_B 92 FANRIDIRQVLP---HRSEYTLLLNNLENAIALDFHHRRELVFWSDV---TLDRILRANLNGS--NVEEVVSTGL----E 159 (386)
T ss_dssp EECBSCEEEECT---TSCCCEEEECSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSC--CEEEEECSSC----S
T ss_pred eecCccceeecc---CCCcEEEEecCCCccEEEEEecCCCeEEEEeC---CCCcEEEEecCCC--CcEEEEeCCC----C
Confidence 455667888888 76666666555445567889998888877632 2468999999986 4444432211 1
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCc
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 173 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~ 173 (494)
.|.... ..+++..|++.... ...|.++++++...+.+...... .+ ..
T Consensus 160 ~p~gla--vd~~~g~lY~~d~~--------------------~~~I~~~~~dg~~~~~l~~~~l~----~P-------~g 206 (386)
T 3v65_B 160 SPGGLA--VDWVHDKLYWTDSG--------------------TSRIEVANLDGAHRKVLLWQSLE----KP-------RA 206 (386)
T ss_dssp CCCCEE--EETTTTEEEEEETT--------------------TTEEEECBTTSCSCEEEECSSCS----CE-------EE
T ss_pred CccEEE--EEeCCCeEEEEcCC--------------------CCeEEEEeCCCCceEEeecCCCC----CC-------cE
Confidence 123333 56777777776421 12477888776654444332110 01 11
Q ss_pred ccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEee
Q 011049 174 EDINLNQLKILTSKESKTEITQYHILSWPLKKSSQIT 210 (494)
Q Consensus 174 ~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt 210 (494)
..++|+++.++++... ..+.|++++.++...+.+.
T Consensus 207 iavdp~~g~ly~td~~--~~~~I~r~~~dG~~~~~~~ 241 (386)
T 3v65_B 207 IALHPMEGTIYWTDWG--NTPRIEASSMDGSGRRIIA 241 (386)
T ss_dssp EEEETTTTEEEEEECS--SSCEEEEEETTSCSCEEEE
T ss_pred EEEEcCCCeEEEeccC--CCCEEEEEeCCCCCcEEEE
Confidence 2566667777776533 2468999998876655553
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.013 Score=56.32 Aligned_cols=109 Identities=8% Similarity=-0.068 Sum_probs=63.2
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeee------eccceEEEEEcCCCCCCCce-Eeeec-ccc
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY------KTSQTRTWLVCPGSKDVAPR-VLFDR-VFE 89 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~------~~~~~~~~~~~~~~g~~~~~-~lt~~-~~~ 89 (494)
+.|+++|. +.++...-......- .+.+||||++|+..... ......|.++|+.+. +.. .+.-. ...
T Consensus 99 ~~VsVID~---~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~--~vv~~I~v~g~~r 172 (426)
T 3c75_H 99 TQQFVIDG---STGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF--LPIADIELPDAPR 172 (426)
T ss_dssp EEEEEEET---TTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC--CEEEEEEETTCCC
T ss_pred CeEEEEEC---CCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC--cEEEEEECCCccc
Confidence 68888888 555544322222233 78999999998776532 112568999999876 332 22211 000
Q ss_pred c-ccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEE
Q 011049 90 N-VYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIW 153 (494)
Q Consensus 90 ~-~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~ 153 (494)
. ....|.... +||||+++++... .....+.++|+.+++.....
T Consensus 173 ~~~g~~P~~~~--~spDGk~lyV~n~-------------------~~~~~VsVID~~t~kvv~~I 216 (426)
T 3c75_H 173 FLVGTYQWMNA--LTPDNKNLLFYQF-------------------SPAPAVGVVDLEGKTFDRML 216 (426)
T ss_dssp CCBSCCGGGSE--ECTTSSEEEEEEC-------------------SSSCEEEEEETTTTEEEEEE
T ss_pred cccCCCcceEE--EcCCCCEEEEEec-------------------CCCCeEEEEECCCCeEEEEE
Confidence 0 001123333 8999998877641 11124889999998765433
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=97.00 E-value=0.015 Score=55.38 Aligned_cols=112 Identities=11% Similarity=0.012 Sum_probs=65.2
Q ss_pred CccceeeeccCCCCCCCCCeecccc-------ccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecc
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKL-------DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV 87 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~-------~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~ 87 (494)
+..+.|.++|+ ..+++...... .......+|+|||+.|+..+..+. ...|.+.++..+ +........
T Consensus 204 ~~dg~i~i~d~---~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~-~g~i~i~d~~~~--~~~~~~~~~ 277 (397)
T 1sq9_A 204 FNNGTVQISEL---STLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS-FGCITLYETEFG--ERIGSLSVP 277 (397)
T ss_dssp CTTSEEEEEET---TTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETT-EEEEEEEETTTC--CEEEEECBC
T ss_pred eCCCcEEEEEC---CCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCC-CceEEEEECCCC--cccceeccC
Confidence 44578888888 55554443333 455667899999998876543211 257888888765 433332220
Q ss_pred cc-c-----ccCCCCCC--ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEe
Q 011049 88 FE-N-----VYSDPGSP--MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE 154 (494)
Q Consensus 88 ~~-~-----~~~~~~~~--~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~ 154 (494)
.. . .+. ...+ .+.|+|||+.++.... ++ .|.++|+.+++....+.
T Consensus 278 ~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~------------------dg---~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 278 THSSQASLGEFA-HSSWVMSLSFNDSGETLCSAGW------------------DG---KLRFWDVKTKERITTLN 330 (397)
T ss_dssp --------CCBS-BSSCEEEEEECSSSSEEEEEET------------------TS---EEEEEETTTTEEEEEEE
T ss_pred cccccccccccc-cCCcEEEEEECCCCCEEEEEeC------------------CC---eEEEEEcCCCceeEEEe
Confidence 00 0 000 0122 2459999998776541 11 38888988876655444
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=96.98 E-value=0.015 Score=55.07 Aligned_cols=118 Identities=9% Similarity=-0.021 Sum_probs=63.4
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEE
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYIL 124 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~ 124 (494)
..+|||||+.|+..+.. ....|.+-++.++ +........... . .+.|||||+.++....
T Consensus 138 ~v~fSpDg~~la~as~~--~d~~i~iwd~~~~--~~~~~~~~~~~V-----~--~v~fspdg~~l~s~s~---------- 196 (365)
T 4h5i_A 138 LVYISREGTVAAIASSK--VPAIMRIIDPSDL--TEKFEIETRGEV-----K--DLHFSTDGKVVAYITG---------- 196 (365)
T ss_dssp EEEECTTSSCEEEEESC--SSCEEEEEETTTT--EEEEEEECSSCC-----C--EEEECTTSSEEEEECS----------
T ss_pred EEEEcCCCCEEEEEECC--CCCEEEEeECCCC--cEEEEeCCCCce-----E--EEEEccCCceEEeccc----------
Confidence 46799999998876531 1345777787766 444333322211 1 2449999998877641
Q ss_pred EccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCC
Q 011049 125 LNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 204 (494)
Q Consensus 125 ~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~ 204 (494)
+ .+.+++..+++........+. ...+ ....|+||+..++...........++.++....
T Consensus 197 ---------~---~~~~~~~~~~~~~~~~~~~~~---~~~v------~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~ 255 (365)
T 4h5i_A 197 ---------S---SLEVISTVTGSCIARKTDFDK---NWSL------SKINFIADDTVLIAASLKKGKGIVLTKISIKSG 255 (365)
T ss_dssp ---------S---CEEEEETTTCCEEEEECCCCT---TEEE------EEEEEEETTEEEEEEEESSSCCEEEEEEEEETT
T ss_pred ---------e---eEEEEEeccCcceeeeecCCC---CCCE------EEEEEcCCCCEEEEEecCCcceeEEeecccccc
Confidence 1 255666666543322111110 0000 123788998777665444333334566655443
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=96.97 E-value=0.018 Score=55.22 Aligned_cols=152 Identities=11% Similarity=0.093 Sum_probs=84.3
Q ss_pred CccceeeeccCCCCCCCCCeec-cccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEIL-HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~l-t~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
+..+.|.++++ .+++.... ..........+|+|||+.|+..+. ...|.+.++..+. ..+.+.......
T Consensus 116 ~~dg~i~iwd~---~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~----d~~i~iwd~~~~~-~~~~~~~h~~~v--- 184 (420)
T 3vl1_A 116 TTEGDIKVLDS---NFNLQREIDQAHVSEITKLKFFPSGEALISSSQ----DMQLKIWSVKDGS-NPRTLIGHRATV--- 184 (420)
T ss_dssp ETTSCEEEECT---TSCEEEEETTSSSSCEEEEEECTTSSEEEEEET----TSEEEEEETTTCC-CCEEEECCSSCE---
T ss_pred ECCCCEEEEeC---CCcceeeecccccCccEEEEECCCCCEEEEEeC----CCeEEEEeCCCCc-CceEEcCCCCcE---
Confidence 34568888888 65655554 344555667899999998776542 3467788887652 222332221111
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcc-hhhhheeee-----
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNRE-KYFETAVAL----- 167 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~-~~~~~~~~~----- 167 (494)
. .+.|+|||+.++.... ++ .+.++|+.+++.......... .........
T Consensus 185 --~--~~~~~~~~~~l~s~~~------------------d~---~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 239 (420)
T 3vl1_A 185 --T--DIAIIDRGRNVLSASL------------------DG---TIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTD 239 (420)
T ss_dssp --E--EEEEETTTTEEEEEET------------------TS---CEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCC
T ss_pred --E--EEEEcCCCCEEEEEcC------------------CC---cEEEeECCCCceeEEeecCCCCCCCccEEEEecCCc
Confidence 1 2349999998876541 11 277788887765544332110 000000000
Q ss_pred -------ccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCce
Q 011049 168 -------VFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKS 206 (494)
Q Consensus 168 -------~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~ 206 (494)
........|+|++..++.... -..+.++++.+++.
T Consensus 240 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~----dg~i~i~d~~~~~~ 281 (420)
T 3vl1_A 240 RQLHEISTSKKNNLEFGTYGKYVIAGHV----SGVITVHNVFSKEQ 281 (420)
T ss_dssp SSCGGGCCCCCCTTCSSCTTEEEEEEET----TSCEEEEETTTCCE
T ss_pred ceeeecccCcccceEEcCCCCEEEEEcC----CCeEEEEECCCCce
Confidence 011123578899876654332 24578888776553
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0056 Score=58.73 Aligned_cols=146 Identities=8% Similarity=0.056 Sum_probs=84.7
Q ss_pred CccceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
+..+.|.++|+ ..+++.. +..........+|+|||+.++.+.... ....|.+.++.++ +..........
T Consensus 236 ~~d~~v~iwd~---~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs-~d~~i~i~d~~~~--~~~~~~~~~~~---- 305 (401)
T 4aez_A 236 GNDNVVQIWDA---RSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGT-MDKQIHFWNAATG--ARVNTVDAGSQ---- 305 (401)
T ss_dssp ETTSCEEEEET---TCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCT-TTCEEEEEETTTC--CEEEEEECSSC----
T ss_pred eCCCeEEEccC---CCCCccEEecCCcceEEEEEECCCCCCEEEEecCC-CCCEEEEEECCCC--CEEEEEeCCCc----
Confidence 34568889998 5555443 334445566889999998887765311 2457888888876 44433332211
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCc
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 173 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~ 173 (494)
-..+.|+|||+.++..... .++ .+.++|+.+++...+....+.. ..-..
T Consensus 306 ---v~~~~~s~~~~~l~~~~g~----------------~dg---~i~v~~~~~~~~~~~~~~~~h~---------~~v~~ 354 (401)
T 4aez_A 306 ---VTSLIWSPHSKEIMSTHGF----------------PDN---NLSIWSYSSSGLTKQVDIPAHD---------TRVLY 354 (401)
T ss_dssp ---EEEEEECSSSSEEEEEECT----------------TTC---EEEEEEEETTEEEEEEEEECCS---------SCCCE
T ss_pred ---EEEEEECCCCCeEEEEeec----------------CCC---cEEEEecCCccceeEEEecCCC---------CCEEE
Confidence 1124499999988876411 111 3888888887655544322110 00112
Q ss_pred ccccccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 174 EDINLNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 174 ~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
..|+||+..++... .-..+.++++.+++
T Consensus 355 ~~~s~dg~~l~s~~----~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 355 SALSPDGRILSTAA----SDENLKFWRVYDGD 382 (401)
T ss_dssp EEECTTSSEEEEEC----TTSEEEEEECCC--
T ss_pred EEECCCCCEEEEEe----CCCcEEEEECCCCc
Confidence 47889988665432 23567778876654
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.041 Score=52.60 Aligned_cols=147 Identities=11% Similarity=0.093 Sum_probs=85.5
Q ss_pred ccceeeeccCCCCC-CCC-CeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 16 PRDIIYTQPAEPAE-GEK-PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 16 ~~~~i~~~~~~~~~-~~~-~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
..+.|.++++ . .+. ...+...........|+|||+.|+..+. ...|.+.++..+ ...........
T Consensus 194 ~dg~i~i~d~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~----d~~v~iwd~~~~--~~~~~~~~~~~---- 260 (401)
T 4aez_A 194 RSGAIHHHDV---RIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGN----DNVVQIWDARSS--IPKFTKTNHNA---- 260 (401)
T ss_dssp TTSEEEEEET---TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTCS--SEEEEECCCSS----
T ss_pred CCCCEEEEec---ccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeC----CCeEEEccCCCC--CccEEecCCcc----
Confidence 4567888887 4 222 2334445555667899999998876542 346788888765 43333221111
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCc
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 173 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~ 173 (494)
.-..+.|+|+|..++..... ..+ ..+.++|+.+++.......... . ..
T Consensus 261 --~v~~~~~~p~~~~ll~~~~g---------------s~d---~~i~i~d~~~~~~~~~~~~~~~-----v-------~~ 308 (401)
T 4aez_A 261 --AVKAVAWCPWQSNLLATGGG---------------TMD---KQIHFWNAATGARVNTVDAGSQ-----V-------TS 308 (401)
T ss_dssp --CCCEEEECTTSTTEEEEECC---------------TTT---CEEEEEETTTCCEEEEEECSSC-----E-------EE
T ss_pred --eEEEEEECCCCCCEEEEecC---------------CCC---CEEEEEECCCCCEEEEEeCCCc-----E-------EE
Confidence 11234599999888776521 011 1488889888876554433221 1 12
Q ss_pred ccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEe
Q 011049 174 EDINLNQLKILTSKESKTEITQYHILSWPLKKSSQI 209 (494)
Q Consensus 174 ~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~l 209 (494)
..|++++..++....+ ....+.+++..+++....
T Consensus 309 ~~~s~~~~~l~~~~g~--~dg~i~v~~~~~~~~~~~ 342 (401)
T 4aez_A 309 LIWSPHSKEIMSTHGF--PDNNLSIWSYSSSGLTKQ 342 (401)
T ss_dssp EEECSSSSEEEEEECT--TTCEEEEEEEETTEEEEE
T ss_pred EEECCCCCeEEEEeec--CCCcEEEEecCCccceeE
Confidence 3788998877765432 234677777666544433
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.011 Score=54.43 Aligned_cols=56 Identities=9% Similarity=0.030 Sum_probs=38.0
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeec--cceEEEEEcCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT--SQTRTWLVCPGSK 76 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~--~~~~~~~~~~~~g 76 (494)
.+.||.++. ++++.+.++ .......++|||||+.|++...... ....|++++++++
T Consensus 168 ~~~v~~~d~---~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 168 HHSVYRLPP---DGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp CEEEEEECS---SSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETT
T ss_pred CCeEEEEcC---CCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC
Confidence 357888887 677777776 3333456799999998877643210 1268999988764
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0066 Score=55.86 Aligned_cols=139 Identities=10% Similarity=0.004 Sum_probs=76.8
Q ss_pred CCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCE
Q 011049 29 EGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTN 108 (494)
Q Consensus 29 ~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~ 108 (494)
.+.+.++|+.+.....+|+|+|||+.|+|+... ...|++++.++ +.+.+...... +.. +.++|||+
T Consensus 33 ~~~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~---~~~i~~~~~~g---~~~~~~~~~~~-----~~g--l~~d~dG~- 98 (305)
T 3dr2_A 33 GDARLLTLYDQATWSEGPAWWEAQRTLVWSDLV---GRRVLGWREDG---TVDVLLDATAF-----TNG--NAVDAQQR- 98 (305)
T ss_dssp TTCCCEEEECCCSSEEEEEEEGGGTEEEEEETT---TTEEEEEETTS---CEEEEEESCSC-----EEE--EEECTTSC-
T ss_pred CCCceEEEecCCcCccCCeEeCCCCEEEEEECC---CCEEEEEeCCC---CEEEEeCCCCc-----cce--eeECCCCC-
Confidence 456778888776666689999999998887533 45789998853 33333322211 111 23899998
Q ss_pred EEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEe
Q 011049 109 VIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKE 188 (494)
Q Consensus 109 i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~ 188 (494)
++.... . ...|.+++.+ |+.+.+....... . ...-+...+++||+ ++++..
T Consensus 99 l~v~~~-------------------~-~~~v~~~~~~-g~~~~~~~~~~~~------~-~~~~~~i~~d~dG~-l~~td~ 149 (305)
T 3dr2_A 99 LVHCEH-------------------G-RRAITRSDAD-GQAHLLVGRYAGK------R-LNSPNDLIVARDGA-IWFTDP 149 (305)
T ss_dssp EEEEET-------------------T-TTEEEEECTT-SCEEEEECEETTE------E-CSCCCCEEECTTSC-EEEECC
T ss_pred EEEEEC-------------------C-CCEEEEECCC-CCEEEEEeccCCC------c-cCCCCCEEECCCCC-EEEeCc
Confidence 433321 1 1137778876 5554443221110 0 00012246677775 555421
Q ss_pred c---C-----------CCCCeEEEEEcCCCceeEee
Q 011049 189 S---K-----------TEITQYHILSWPLKKSSQIT 210 (494)
Q Consensus 189 s---~-----------~~p~~l~~~~~~~~~~~~lt 210 (494)
. . .....||+++.++++.+.+.
T Consensus 150 ~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 150 PFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp SGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred CCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 0 0 01246899988777666554
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0083 Score=54.00 Aligned_cols=111 Identities=13% Similarity=-0.027 Sum_probs=66.6
Q ss_pred CceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEe-CCCCCCCCCC
Q 011049 234 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA-GPSIPIIGEG 312 (494)
Q Consensus 234 g~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~-~~~~~~~g~g 312 (494)
...+.+++..+.. . .-+||.+||-. .....+...++.+.. .+.+ +.+
T Consensus 60 ~~~~~~~v~~~~~----~---~~iVva~RGT~----------------------~~~d~l~d~~~~~~~~~~~~---~~~ 107 (269)
T 1tib_A 60 VGDVTGFLALDNT----N---KLIVLSFRGSR----------------------SIENWIGNLNFDLKEINDIC---SGC 107 (269)
T ss_dssp TTTEEEEEEEETT----T---TEEEEEECCCS----------------------CTHHHHTCCCCCEEECTTTS---TTC
T ss_pred CcCcEEEEEEECC----C---CEEEEEEeCCC----------------------CHHHHHHhcCeeeeecCCCC---CCC
Confidence 3467888887743 1 45778888731 123355677887765 2221 111
Q ss_pred CCCCC-chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC---ceeEEEeCCCC
Q 011049 313 DKLPN-DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH---LFCCGIARSGS 378 (494)
Q Consensus 313 ~~~~~-~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~---~~~a~v~~~~~ 378 (494)
.-..+ ........+|+...++.+.++.. ..++.++|||+||.+|..++..... .+++....+|.
T Consensus 108 ~vh~Gf~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~GHSLGGalA~l~a~~l~~~~~~~~~~tfg~P~ 175 (269)
T 1tib_A 108 RGHDGFTSSWRSVADTLRQKVEDAVREHP--DYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPR 175 (269)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHHHHHHCT--TSEEEEEEETHHHHHHHHHHHHHTTSSSCEEEEEESCCC
T ss_pred EecHHHHHHHHHHHHHHHHHHHHHHHHCC--CceEEEecCChHHHHHHHHHHHHHhcCCCeEEEEeCCCC
Confidence 10000 11123456777788887776531 2589999999999999999887532 35555555553
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.014 Score=54.65 Aligned_cols=156 Identities=8% Similarity=0.000 Sum_probs=84.4
Q ss_pred CCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeee-eccceEEEEEcCCCCCCCceEeeecccc--c
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY-KTSQTRTWLVCPGSKDVAPRVLFDRVFE--N 90 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~-~~~~~~~~~~~~~~g~~~~~~lt~~~~~--~ 90 (494)
.+..+.|.++++ ..++...............|+|||+.|+..... ......+.+.++..+............. .
T Consensus 92 ~~~dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~ 168 (369)
T 3zwl_B 92 GSADYSIKLWDV---SNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHK 168 (369)
T ss_dssp EETTTEEEEEET---TTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEE
T ss_pred EeCCCeEEEEEC---CCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeee
Confidence 345678999998 667666555555566778999999998876542 1112456666655432111111110000 0
Q ss_pred ccCCC---CCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCC-CceEEEEeeCcchhhhheee
Q 011049 91 VYSDP---GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINT-GSKERIWESNREKYFETAVA 166 (494)
Q Consensus 91 ~~~~~---~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~-g~~~~l~~~~~~~~~~~~~~ 166 (494)
..... .-..+.|+|||+.++.... ++ .+.++|+.+ ++.......... ..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~------------------dg---~i~i~d~~~~~~~~~~~~~~~~----~v-- 221 (369)
T 3zwl_B 169 IITHEGLDAATVAGWSTKGKYIIAGHK------------------DG---KISKYDVSNNYEYVDSIDLHEK----SI-- 221 (369)
T ss_dssp EECCTTCCCEEEEEECGGGCEEEEEET------------------TS---EEEEEETTTTTEEEEEEECCSS----CE--
T ss_pred ccCCcCccceeEEEEcCCCCEEEEEcC------------------CC---EEEEEECCCCcEeEEEEecCCC----ce--
Confidence 00000 1112448999998776541 11 388888887 333332221111 01
Q ss_pred eccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeE
Q 011049 167 LVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 208 (494)
Q Consensus 167 ~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~ 208 (494)
....|+|++..++.... -..+.++++.+++...
T Consensus 222 -----~~~~~~~~~~~l~~~~~----d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 222 -----SDMQFSPDLTYFITSSR----DTNSFLVDVSTLQVLK 254 (369)
T ss_dssp -----EEEEECTTSSEEEEEET----TSEEEEEETTTCCEEE
T ss_pred -----eEEEECCCCCEEEEecC----CceEEEEECCCCceee
Confidence 12378888877665432 2468888887765443
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.028 Score=56.56 Aligned_cols=83 Identities=8% Similarity=-0.051 Sum_probs=46.9
Q ss_pred cceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
.+.|+++|. ++++... +..+ .....+++||||++++..+ + ...|+++|+... +.+.+..-.... .|
T Consensus 176 ~~~V~viD~---~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~-~---dg~V~viD~~~~--t~~~v~~i~~G~---~P 242 (567)
T 1qks_A 176 AGQIALIDG---STYEIKTVLDTG-YAVHISRLSASGRYLFVIG-R---DGKVNMIDLWMK--EPTTVAEIKIGS---EA 242 (567)
T ss_dssp TTEEEEEET---TTCCEEEEEECS-SCEEEEEECTTSCEEEEEE-T---TSEEEEEETTSS--SCCEEEEEECCS---EE
T ss_pred CCeEEEEEC---CCCeEEEEEeCC-CCccceEECCCCCEEEEEc-C---CCeEEEEECCCC--CCcEeEEEecCC---CC
Confidence 357788887 6555443 3333 2334789999999876543 2 457999998521 112222111111 11
Q ss_pred CCCceeeC----CCCCEEEEEEe
Q 011049 96 GSPMMTRT----STGTNVIAKIK 114 (494)
Q Consensus 96 ~~~~~~~s----pDG~~i~~~~~ 114 (494)
. -+.+| |||++++....
T Consensus 243 ~--~ia~s~~~~pDGk~l~v~n~ 263 (567)
T 1qks_A 243 R--SIETSKMEGWEDKYAIAGAY 263 (567)
T ss_dssp E--EEEECCSTTCTTTEEEEEEE
T ss_pred c--eeEEccccCCCCCEEEEEEc
Confidence 2 12378 79998877653
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=96.82 E-value=0.011 Score=56.94 Aligned_cols=139 Identities=10% Similarity=-0.029 Sum_probs=79.8
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
..+.|+++++ ..++...............|+|||+.|+..+. ...|.+.++.++ +...... ..
T Consensus 76 ~d~~v~i~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~--~~~~~~~--~h------ 138 (420)
T 3vl1_A 76 LDGHDFLFNT---IIRDGSKMLKRADYTAVDTAKLQMRRFILGTT----EGDIKVLDSNFN--LQREIDQ--AH------ 138 (420)
T ss_dssp ETTEEEEEEC---CSEETTTTSCSCCEEEEEEECSSSCEEEEEET----TSCEEEECTTSC--EEEEETT--SS------
T ss_pred cCCcEEEEEe---cccceeeEEecCCceEEEEEecCCCEEEEEEC----CCCEEEEeCCCc--ceeeecc--cc------
Confidence 4568889988 55544444333333445579999999887642 345777787765 3333321 11
Q ss_pred CCC--ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCc
Q 011049 96 GSP--MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 173 (494)
Q Consensus 96 ~~~--~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~ 173 (494)
..+ .+.|+|||+.++.... ++ .+.++|+.+++.......... .. ..
T Consensus 139 ~~~v~~~~~~~~~~~l~s~s~------------------d~---~i~iwd~~~~~~~~~~~~h~~----~v-------~~ 186 (420)
T 3vl1_A 139 VSEITKLKFFPSGEALISSSQ------------------DM---QLKIWSVKDGSNPRTLIGHRA----TV-------TD 186 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEET------------------TS---EEEEEETTTCCCCEEEECCSS----CE-------EE
T ss_pred cCccEEEEECCCCCEEEEEeC------------------CC---eEEEEeCCCCcCceEEcCCCC----cE-------EE
Confidence 122 2449999997776541 11 388888887765443332111 01 12
Q ss_pred ccccccCcEEEEEEecCCCCCeEEEEEcCCCcee
Q 011049 174 EDINLNQLKILTSKESKTEITQYHILSWPLKKSS 207 (494)
Q Consensus 174 ~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~ 207 (494)
..|+|++..++.... -..+.++++.+++..
T Consensus 187 ~~~~~~~~~l~s~~~----d~~v~iwd~~~~~~~ 216 (420)
T 3vl1_A 187 IAIIDRGRNVLSASL----DGTIRLWECGTGTTI 216 (420)
T ss_dssp EEEETTTTEEEEEET----TSCEEEEETTTTEEE
T ss_pred EEEcCCCCEEEEEcC----CCcEEEeECCCCcee
Confidence 378888876664322 245777787766543
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.017 Score=58.13 Aligned_cols=135 Identities=7% Similarity=0.023 Sum_probs=73.6
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
..+.|.+++. .+.....+..........+||||++.|+..+. ...+.+.++++. ..+.+.......
T Consensus 405 ~d~~v~~~~~---~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~----d~~v~~w~~~~~--~~~~~~~~~~~v----- 470 (577)
T 2ymu_A 405 DDKTVKLWNR---NGQLLQTLTGHSSSVWGVAFSPDDQTIASASD----DKTVKLWNRNGQ--LLQTLTGHSSSV----- 470 (577)
T ss_dssp TTSEEEEECT---TCCEEEEEECCSSCEEEEEECTTSSEEEEEET----TSEEEEEETTSC--EEEEEECCSSCE-----
T ss_pred CCCEEEEEeC---CCCEEEEecCCCCCeEEEEECCCCCEEEEEcC----CCEEEEEECCCC--EEEEEcCCCCCE-----
Confidence 3457888887 54444445555555567889999998886542 334666666543 223332221111
Q ss_pred CCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccc
Q 011049 96 GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEED 175 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~ 175 (494)
..+.|||||+.|+.... +. .+.++|.++...+.+...... . ....
T Consensus 471 --~~~~~spd~~~las~~~-------------------d~--~i~iw~~~~~~~~~~~~h~~~-----v-------~~l~ 515 (577)
T 2ymu_A 471 --RGVAFSPDGQTIASASD-------------------DK--TVKLWNRNGQLLQTLTGHSSS-----V-------RGVA 515 (577)
T ss_dssp --EEEEECTTSCEEEEEET-------------------TS--EEEEEETTSCEEEEEECCSSC-----E-------EEEE
T ss_pred --EEEEEcCCCCEEEEEeC-------------------CC--EEEEEcCCCCEEEEEeCCCCC-----E-------EEEE
Confidence 12448999998876541 11 266777654333333222211 1 1237
Q ss_pred ccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 176 INLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 176 ~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
|+||++.++... . -..+.+++..+
T Consensus 516 ~s~dg~~l~s~~-~---dg~v~lwd~~~ 539 (577)
T 2ymu_A 516 FSPDGQTIASAS-D---DKTVKLWNRNG 539 (577)
T ss_dssp ECTTSSCEEEEE-T---TSEEEEECTTS
T ss_pred EcCCCCEEEEEE-C---cCEEEEEeCCC
Confidence 889988665432 2 24577777543
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=96.78 E-value=0.032 Score=51.67 Aligned_cols=146 Identities=8% Similarity=-0.007 Sum_probs=79.9
Q ss_pred cceeeeccCCCCCCCCCeecc-ccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILH-KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt-~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
.+.|++++. ++++.+.++ .........+|+|||+.++...........|++++++++ ..+.+.......
T Consensus 65 ~~~i~~~d~---~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~----- 134 (333)
T 2dg1_A 65 EGNIFKINP---ETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD--NLQDIIEDLSTA----- 134 (333)
T ss_dssp TCEEEEECT---TTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC--SCEEEECSSSSC-----
T ss_pred CCEEEEEeC---CCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCC--EEEEEEccCccC-----
Confidence 456777777 667766654 233345577899999744432211001257999999887 545333211111
Q ss_pred CCC-ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcc
Q 011049 96 GSP-MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEE 174 (494)
Q Consensus 96 ~~~-~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~ 174 (494)
..+ .+.++|||+ +++..... .. ......|+++|.++++.+.+...... . ...
T Consensus 135 ~~~~~i~~d~~g~-l~v~~~~~-------------~~-~~~~~~l~~~~~~~~~~~~~~~~~~~-----~-------~~i 187 (333)
T 2dg1_A 135 YCIDDMVFDSKGG-FYFTDFRG-------------YS-TNPLGGVYYVSPDFRTVTPIIQNISV-----A-------NGI 187 (333)
T ss_dssp CCEEEEEECTTSC-EEEEECCC-------------BT-TBCCEEEEEECTTSCCEEEEEEEESS-----E-------EEE
T ss_pred CcccceEECCCCC-EEEEeccc-------------cc-cCCCceEEEEeCCCCEEEEeecCCCc-----c-------cce
Confidence 111 133799996 44443210 00 01123588999887776655432110 0 123
Q ss_pred cccccCcEEEEEEecCCCCCeEEEEEcC
Q 011049 175 DINLNQLKILTSKESKTEITQYHILSWP 202 (494)
Q Consensus 175 ~~s~d~~~~~~~~~s~~~p~~l~~~~~~ 202 (494)
.|++|++.+++.... ...|++++.+
T Consensus 188 ~~~~dg~~l~v~~~~---~~~i~~~d~~ 212 (333)
T 2dg1_A 188 ALSTDEKVLWVTETT---ANRLHRIALE 212 (333)
T ss_dssp EECTTSSEEEEEEGG---GTEEEEEEEC
T ss_pred EECCCCCEEEEEeCC---CCeEEEEEec
Confidence 678898877665432 2468888874
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.014 Score=53.19 Aligned_cols=137 Identities=15% Similarity=-0.003 Sum_probs=77.2
Q ss_pred CCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCC-ceeeCCCCC
Q 011049 29 EGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP-MMTRTSTGT 107 (494)
Q Consensus 29 ~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~-~~~~spDG~ 107 (494)
++.+.+.+........+|+|+|||+.|+++... ...|++++++++ .+.+.. .. ..| .+.++|||+
T Consensus 16 ~~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~---~~~i~~~~~~~~---~~~~~~-~~-------~~~~~l~~~~dg~ 81 (296)
T 3e5z_A 16 AGAEARRLADGFTWTEGPVYVPARSAVIFSDVR---QNRTWAWSDDGQ---LSPEMH-PS-------HHQNGHCLNKQGH 81 (296)
T ss_dssp TTCCCEEEECCCSSEEEEEEEGGGTEEEEEEGG---GTEEEEEETTSC---EEEEES-SC-------SSEEEEEECTTCC
T ss_pred CCCcEEEEecCCccccCCeEeCCCCEEEEEeCC---CCEEEEEECCCC---eEEEEC-CC-------CCcceeeECCCCc
Confidence 456667777665555689999999988877533 458999998864 233322 11 112 233799998
Q ss_pred EEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEE
Q 011049 108 NVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSK 187 (494)
Q Consensus 108 ~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~ 187 (494)
. ++... . ...|+++|+++|+.+.+....... ....-....++++|+ ++++.
T Consensus 82 l-~v~~~-------------------~-~~~i~~~d~~~g~~~~~~~~~~~~-------~~~~~~~i~~d~~G~-l~vtd 132 (296)
T 3e5z_A 82 L-IACSH-------------------G-LRRLERQREPGGEWESIADSFEGK-------KLNSPNDVCLAPDGS-LWFSD 132 (296)
T ss_dssp E-EEEET-------------------T-TTEEEEECSTTCCEEEEECEETTE-------ECCCCCCEEECTTSC-EEEEE
T ss_pred E-EEEec-------------------C-CCeEEEEcCCCCcEEEEeeccCCC-------CCCCCCCEEECCCCC-EEEEC
Confidence 3 33321 0 124889999888766654321110 000012246778886 55543
Q ss_pred ec--C-----------C-CCCeEEEEEcCCCceeEe
Q 011049 188 ES--K-----------T-EITQYHILSWPLKKSSQI 209 (494)
Q Consensus 188 ~s--~-----------~-~p~~l~~~~~~~~~~~~l 209 (494)
.. . . ....||.++.+ ++.+.+
T Consensus 133 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (296)
T 3e5z_A 133 PTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAP 167 (296)
T ss_dssp CSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEE
T ss_pred CccccccccccccccccCCCcEEEEECCC-CCEEEe
Confidence 21 0 0 12478998876 554444
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=96.74 E-value=0.034 Score=50.96 Aligned_cols=139 Identities=15% Similarity=0.091 Sum_probs=80.0
Q ss_pred CccceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
+..+.|.++++ ..++... +..........+|+|||+.|+..+. ...|.+.++..+ +........
T Consensus 42 ~~dg~i~iw~~---~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~----d~~i~vwd~~~~--~~~~~~~~~------ 106 (312)
T 4ery_A 42 SADKLIKIWGA---YDGKFEKTISGHKLGISDVAWSSDSNLLVSASD----DKTLKIWDVSSG--KCLKTLKGH------ 106 (312)
T ss_dssp ETTSCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSSEEEEEET----TSEEEEEETTTC--CEEEEEECC------
T ss_pred eCCCeEEEEeC---CCcccchhhccCCCceEEEEEcCCCCEEEEECC----CCEEEEEECCCC--cEEEEEcCC------
Confidence 34567778887 5454433 4444445567899999998876542 346777787765 333322211
Q ss_pred CCCCC--ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCC
Q 011049 94 DPGSP--MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQ 171 (494)
Q Consensus 94 ~~~~~--~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~ 171 (494)
..+ .+.|+|||+.++.... ++ .+.++|+.+++.......... .+
T Consensus 107 --~~~v~~~~~~~~~~~l~s~~~------------------d~---~i~iwd~~~~~~~~~~~~~~~-----~v------ 152 (312)
T 4ery_A 107 --SNYVFCCNFNPQSNLIVSGSF------------------DE---SVRIWDVKTGKCLKTLPAHSD-----PV------ 152 (312)
T ss_dssp --SSCEEEEEECSSSSEEEEEET------------------TS---CEEEEETTTCCEEEEECCCSS-----CE------
T ss_pred --CCCEEEEEEcCCCCEEEEEeC------------------CC---cEEEEECCCCEEEEEecCCCC-----cE------
Confidence 112 2348999998776541 12 288889888765443322111 00
Q ss_pred CcccccccCcEEEEEEecCCCCCeEEEEEcCCCce
Q 011049 172 GEEDINLNQLKILTSKESKTEITQYHILSWPLKKS 206 (494)
Q Consensus 172 ~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~ 206 (494)
....|++++..++.... -..+.++++.+++.
T Consensus 153 ~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~~ 183 (312)
T 4ery_A 153 SAVHFNRDGSLIVSSSY----DGLCRIWDTASGQC 183 (312)
T ss_dssp EEEEECTTSSEEEEEET----TSCEEEEETTTCCE
T ss_pred EEEEEcCCCCEEEEEeC----CCcEEEEECCCCce
Confidence 12367888876554322 24577888776543
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.083 Score=49.51 Aligned_cols=149 Identities=7% Similarity=-0.046 Sum_probs=88.3
Q ss_pred CCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
++.+..|+.+++ ++...+.+.........++|.++++.|+++-. ....|++++++++ ..+.+......
T Consensus 49 ~~~~~~I~~i~~---~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~---~~~~I~r~~~~g~--~~~~~~~~~~~---- 116 (349)
T 3v64_C 49 FANRIDIRQVLP---HRSEYTLLLNNLENAIALDFHHRRELVFWSDV---TLDRILRANLNGS--NVEEVVSTGLE---- 116 (349)
T ss_dssp EECBSCEEEECT---TSCCEEEEECSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSC--SCEEEECSSCS----
T ss_pred eecccceEEEeC---CCCeeEEeecCCCceEEEEEeccccEEEEEec---cCCceEEEecCCC--CceEEEeCCCC----
Confidence 455667888888 76666555544444457789998888877632 2468999999986 44544332111
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCc
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 173 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~ 173 (494)
.|.... ..+++..|++.... ...|.++++++...+.+...... .+ ..
T Consensus 117 ~p~gla--vd~~~g~ly~~d~~--------------------~~~I~~~~~dG~~~~~l~~~~l~----~P-------~~ 163 (349)
T 3v64_C 117 SPGGLA--VDWVHDKLYWTDSG--------------------TSRIEVANLDGAHRKVLLWQSLE----KP-------RA 163 (349)
T ss_dssp CCCEEE--EETTTTEEEEEETT--------------------TTEEEEEETTSCSCEEEECTTCS----CE-------EE
T ss_pred CccEEE--EecCCCeEEEEcCC--------------------CCeEEEEcCCCCceEEEEeCCCC----Cc-------ce
Confidence 122222 56667777776421 12488888877654444322110 01 11
Q ss_pred ccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEe
Q 011049 174 EDINLNQLKILTSKESKTEITQYHILSWPLKKSSQI 209 (494)
Q Consensus 174 ~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~l 209 (494)
..++|+++.++++... ..+.|++++.++...+.+
T Consensus 164 iavdp~~g~ly~td~~--~~~~I~r~~~dG~~~~~~ 197 (349)
T 3v64_C 164 IALHPMEGTIYWTDWG--NTPRIEASSMDGSGRRII 197 (349)
T ss_dssp EEEETTTTEEEEEECS--SSCEEEEEETTSCSCEES
T ss_pred EEEecCcCeEEEeccC--CCCEEEEEeCCCCCcEEE
Confidence 2566767777776543 257899999887655544
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.023 Score=53.20 Aligned_cols=125 Identities=9% Similarity=0.004 Sum_probs=73.6
Q ss_pred eeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEE
Q 011049 34 EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 34 ~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
..|..........+|||||+.|+..+. ...|.+.++..+ +.......... .-..+.|+|||+.++...
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~----dg~i~vwd~~~~--~~~~~~~~h~~------~v~~~~~~~~~~~l~s~~ 93 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSK----DSSASVWYSLNG--ERLGTLDGHTG------TIWSIDVDCFTKYCVTGS 93 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEES----SSCEEEEETTTC--CEEEEECCCSS------CEEEEEECTTSSEEEEEE
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeC----CCEEEEEeCCCc--hhhhhhhhcCC------cEEEEEEcCCCCEEEEEe
Confidence 345666666778899999998876542 345777777765 33332221111 011234999999887654
Q ss_pred eccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEec-CCC
Q 011049 114 KKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKES-KTE 192 (494)
Q Consensus 114 ~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s-~~~ 192 (494)
. ++ .+.++|+.+++.......... . ....|+|++..++..... ...
T Consensus 94 ~------------------dg---~i~iwd~~~~~~~~~~~~~~~-----v-------~~~~~~~~~~~l~~~~~~~~~~ 140 (369)
T 3zwl_B 94 A------------------DY---SIKLWDVSNGQCVATWKSPVP-----V-------KRVEFSPCGNYFLAILDNVMKN 140 (369)
T ss_dssp T------------------TT---EEEEEETTTCCEEEEEECSSC-----E-------EEEEECTTSSEEEEEECCBTTB
T ss_pred C------------------CC---eEEEEECCCCcEEEEeecCCC-----e-------EEEEEccCCCEEEEecCCccCC
Confidence 1 11 388889988876655543221 1 123788888877765443 122
Q ss_pred CCeEEEEEcCC
Q 011049 193 ITQYHILSWPL 203 (494)
Q Consensus 193 p~~l~~~~~~~ 203 (494)
...+.++++..
T Consensus 141 ~g~i~~~d~~~ 151 (369)
T 3zwl_B 141 PGSINIYEIER 151 (369)
T ss_dssp CCEEEEEEEEE
T ss_pred CCEEEEEEecC
Confidence 35566666543
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0088 Score=56.16 Aligned_cols=148 Identities=10% Similarity=-0.038 Sum_probs=78.7
Q ss_pred CccceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
+..+.|.++|+ ..++... +..........+|+||++.++.+...++ .|.+-|+..+ +............
T Consensus 146 s~d~~i~iwd~---~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~---~v~iwd~~~~--~~~~~~~~~~~~~-- 215 (344)
T 4gqb_B 146 SKDICIKVWDL---AQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDN---RILLWDTRCP--KPASQIGCSAPGY-- 215 (344)
T ss_dssp ETTSCEEEEET---TTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTS---CEEEEETTSS--SCEEECC----CC--
T ss_pred eCCCeEEEEEC---CCCcEEEEEcCcCCceEEEEecCCCCCceeeecccc---cccccccccc--ceeeeeecceeec--
Confidence 44567888888 6555443 3333445567789999987666554433 4666677765 3333222111110
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCc
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 173 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~ 173 (494)
.--.+.|+|++.+++..... ++ .+.++|+.+++.......... .. ..
T Consensus 216 --~~~~~~~~p~~~~~l~sg~~-----------------dg---~v~~wd~~~~~~~~~~~~h~~----~v-------~~ 262 (344)
T 4gqb_B 216 --LPTSLAWHPQQSEVFVFGDE-----------------NG---TVSLVDTKSTSCVLSSAVHSQ----CV-------TG 262 (344)
T ss_dssp --CEEEEEECSSCTTEEEEEET-----------------TS---EEEEEESCC--CCEEEECCSS----CE-------EE
T ss_pred --cceeeeecCCCCcceEEecc-----------------CC---cEEEEECCCCcEEEEEcCCCC----CE-------EE
Confidence 11124488877655544321 11 377888887764333222111 01 12
Q ss_pred ccccccCcEEEEEEecCCCCCeEEEEEcCCCceeE
Q 011049 174 EDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 208 (494)
Q Consensus 174 ~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~ 208 (494)
..|+|++..++++.+. -..+.++|..+++..+
T Consensus 263 v~fsp~g~~~lasgs~---D~~i~vwd~~~~~~~~ 294 (344)
T 4gqb_B 263 LVFSPHSVPFLASLSE---DCSLAVLDSSLSELFR 294 (344)
T ss_dssp EEECSSSSCCEEEEET---TSCEEEECTTCCEEEE
T ss_pred EEEccCCCeEEEEEeC---CCeEEEEECCCCcEEE
Confidence 3788998777665543 2457777776665433
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.68 E-value=0.021 Score=55.98 Aligned_cols=59 Identities=12% Similarity=0.024 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHH-HHHHcCCCCCCcEEEEecChHHHHHHHHHHhC-----------C-CceeEEEeCCCCCC
Q 011049 322 EQLVSSAEAAVE-EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-----------P-HLFCCGIARSGSYN 380 (494)
Q Consensus 322 ~~~~~d~~~~v~-~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~-----------p-~~~~a~v~~~~~~~ 380 (494)
.....|+...+. |+.+.+..-..++.|+|.||||..+..+|..- + =.+++++...|+++
T Consensus 145 ~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~inLkGi~IGNg~~d 216 (483)
T 1ac5_A 145 EDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWID 216 (483)
T ss_dssp HHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCcccceeeeEecCCccc
Confidence 445666666554 44444434457899999999999887766321 1 24678877777654
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=96.66 E-value=0.039 Score=50.38 Aligned_cols=116 Identities=9% Similarity=-0.032 Sum_probs=66.0
Q ss_pred ccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEE
Q 011049 44 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYI 123 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~ 123 (494)
.+|.|+||++.|+++... ...|++++++++ ..+.+. .... +. .+.++|||+ +++..
T Consensus 16 Egp~w~~~~~~l~~~d~~---~~~i~~~d~~~~--~~~~~~-~~~~-----~~--~i~~~~dG~-l~v~~---------- 71 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIP---AKKVCRWDSFTK--QVQRVT-MDAP-----VS--SVALRQSGG-YVATI---------- 71 (297)
T ss_dssp EEEEEETTTTEEEEEETT---TTEEEEEETTTC--CEEEEE-CSSC-----EE--EEEEBTTSS-EEEEE----------
T ss_pred cCCeEECCCCEEEEEECC---CCEEEEEECCCC--cEEEEe-CCCc-----eE--EEEECCCCC-EEEEE----------
Confidence 379999998888886432 468999999876 433322 1111 12 233799998 43332
Q ss_pred EEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCC--------CCCe
Q 011049 124 LLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKT--------EITQ 195 (494)
Q Consensus 124 ~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~--------~p~~ 195 (494)
. ..|+++|+++++.+.+.......-.... +...++++|+ +++...... ....
T Consensus 72 ---------~---~~l~~~d~~~g~~~~~~~~~~~~~~~~~-------~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~ 131 (297)
T 3g4e_A 72 ---------G---TKFCALNWKEQSAVVLATVDNDKKNNRF-------NDGKVDPAGR-YFAGTMAEETAPAVLERHQGA 131 (297)
T ss_dssp ---------T---TEEEEEETTTTEEEEEEECCTTCSSEEE-------EEEEECTTSC-EEEEEEECCSBTTBCCTTCEE
T ss_pred ---------C---CeEEEEECCCCcEEEEEecCCCCCCCCC-------CCEEECCCCC-EEEecCCcccccccccCCCcE
Confidence 1 1388899988877666543211000000 1236778887 455433221 2246
Q ss_pred EEEEEcCC
Q 011049 196 YHILSWPL 203 (494)
Q Consensus 196 l~~~~~~~ 203 (494)
+|+++.++
T Consensus 132 l~~~d~~g 139 (297)
T 3g4e_A 132 LYSLFPDH 139 (297)
T ss_dssp EEEECTTS
T ss_pred EEEEECCC
Confidence 88888653
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=96.66 E-value=0.032 Score=53.38 Aligned_cols=152 Identities=10% Similarity=0.040 Sum_probs=82.8
Q ss_pred CccceeeeccCCCCCCCCCee-c--cccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccc
Q 011049 15 SPRDIIYTQPAEPAEGEKPEI-L--HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV 91 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~-l--t~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~ 91 (494)
+..+.|.++|+ ..++... + ..........+|+|||+.|+..+ ....|.+.++..+ +...... ....
T Consensus 151 ~~dg~i~iwd~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~d~~i~iwd~~~~--~~~~~~~-~~~~- 219 (402)
T 2aq5_A 151 GCDNVILVWDV---GTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC----RDKRVRVIEPRKG--TVVAEKD-RPHE- 219 (402)
T ss_dssp ETTSCEEEEET---TTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE----TTSEEEEEETTTT--EEEEEEE-CSSC-
T ss_pred cCCCEEEEEEC---CCCCccEEEecCCCCCceEEEEECCCCCEEEEEe----cCCcEEEEeCCCC--ceeeeec-cCCC-
Confidence 44567889998 5555433 3 23444556789999999888764 2457888888865 3332221 1111
Q ss_pred cCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCce-EEEEeeCcchhhhheeeeccC
Q 011049 92 YSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSK-ERIWESNREKYFETAVALVFG 170 (494)
Q Consensus 92 ~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~-~~l~~~~~~~~~~~~~~~~s~ 170 (494)
......+.|+|||+.++..... .....+.++|+.+++. ..+...... ..
T Consensus 220 --~~~~~~~~~~~~~~~l~~g~~~------------------~~d~~i~iwd~~~~~~~~~~~~~~~~----------~~ 269 (402)
T 2aq5_A 220 --GTRPVHAVFVSEGKILTTGFSR------------------MSERQVALWDTKHLEEPLSLQELDTS----------SG 269 (402)
T ss_dssp --SSSCCEEEECSTTEEEEEEECT------------------TCCEEEEEEETTBCSSCSEEEECCCC----------SS
T ss_pred --CCcceEEEEcCCCcEEEEeccC------------------CCCceEEEEcCccccCCceEEeccCC----------Cc
Confidence 0011234499999866654210 0111477788776543 122211110 00
Q ss_pred CCcccccccCcEEEEEEecCCCCCeEEEEEcCCCc--eeEee
Q 011049 171 QGEEDINLNQLKILTSKESKTEITQYHILSWPLKK--SSQIT 210 (494)
Q Consensus 171 ~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~--~~~lt 210 (494)
.....|+||+..+++.... -..+.++++.+++ ...+.
T Consensus 270 v~~~~~s~~~~~l~~~g~~---dg~i~i~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 270 VLLPFFDPDTNIVYLCGKG---DSSIRYFEITSEAPFLHYLS 308 (402)
T ss_dssp CEEEEEETTTTEEEEEETT---CSCEEEEEECSSTTCEEEEE
T ss_pred eeEEEEcCCCCEEEEEEcC---CCeEEEEEecCCCcceEeec
Confidence 1124788898877665432 2457777776665 44444
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.031 Score=53.53 Aligned_cols=142 Identities=9% Similarity=-0.016 Sum_probs=72.2
Q ss_pred CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCccc-CCCCccCCCCc--hhHHHHHhCCeEEEeCCCCCCC
Q 011049 233 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVR-GSPNEFSGMTP--TSSLIFLARRFAVLAGPSIPII 309 (494)
Q Consensus 233 dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~l~~~G~~v~~~~~~~~~ 309 (494)
.+..+..|++...+ ++. ..|+++|++|||.++.-. +.+. -+|-.+..-.. .....|.. -..++.++..-..
T Consensus 26 ~~~~lfy~f~~s~~-~~~---~~Pl~lwlnGGPG~SS~~-g~~~e~GP~~~~~~~~l~~n~~sW~~-~an~lfiDqPvGt 99 (421)
T 1cpy_A 26 EDKHFFFWTFESRN-DPA---KDPVILWLNGGPGCSSLT-GLFFALGPSSIGPDLKPIGNPYSWNS-NATVIFLDQPVNV 99 (421)
T ss_dssp TTEEEEEEEECCSS-CTT---TSCEEEEECCTTTBCTHH-HHTTTTSSEEEETTTEEEECTTCGGG-GSEEECCCCSTTS
T ss_pred CCcEEEEEEEEeCC-CCC---CCCEEEEECCCCchHhHH-HHHHccCCcEECCCCceeECCccccc-ccCEEEecCCCcc
Confidence 46678887776543 332 279999999998543210 0000 01100000000 00001111 1234444432233
Q ss_pred CCCCCCCC-chhHHHHHHHHHHHHH-HHHHcCCCCC--CcEEEEecChHHHHHHHHHHhC---C---CceeEEEeCCCCC
Q 011049 310 GEGDKLPN-DRFVEQLVSSAEAAVE-EVVRRGVADP--SRIAVGGHSYGAFMTAHLLAHA---P---HLFCCGIARSGSY 379 (494)
Q Consensus 310 g~g~~~~~-~~~~~~~~~d~~~~v~-~l~~~~~~d~--~ri~i~G~S~GG~~a~~~~~~~---p---~~~~a~v~~~~~~ 379 (494)
|+...... .........|+...++ |+.+.+.... .++.|+|.||||..+..++..- . =.+++++...|++
T Consensus 100 GfSy~~~~~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~IGNg~~ 179 (421)
T 1cpy_A 100 GFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLT 179 (421)
T ss_dssp TTCEESSCCCCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEEEESCCC
T ss_pred cccCCCCCCCCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEEecCccc
Confidence 43222111 1112345667777765 4444554555 6899999999999887766432 1 1368888878876
Q ss_pred C
Q 011049 380 N 380 (494)
Q Consensus 380 ~ 380 (494)
+
T Consensus 180 d 180 (421)
T 1cpy_A 180 D 180 (421)
T ss_dssp C
T ss_pred C
Confidence 6
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.038 Score=55.37 Aligned_cols=148 Identities=8% Similarity=-0.031 Sum_probs=79.4
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcC--CCCCCCceEeeecccccccCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP--GSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~--~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
+.|.++|. +.++..............+|||||+.|+..+ + ...|.++++ .++ + .+..-.... .|
T Consensus 159 ~~V~v~D~---~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~-~---d~~V~v~D~~~~t~--~--~~~~i~~g~---~p 224 (543)
T 1nir_A 159 GQIALVDG---DSKKIVKVIDTGYAVHISRMSASGRYLLVIG-R---DARIDMIDLWAKEP--T--KVAEIKIGI---EA 224 (543)
T ss_dssp TEEEEEET---TTCCEEEEEECSTTEEEEEECTTSCEEEEEE-T---TSEEEEEETTSSSC--E--EEEEEECCS---EE
T ss_pred CeEEEEEC---CCceEEEEEecCcccceEEECCCCCEEEEEC-C---CCeEEEEECcCCCC--c--EEEEEecCC---Cc
Confidence 35667776 5555443322222245678999999877654 2 367999998 443 2 222211111 11
Q ss_pred CCCceeeCC----CCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeecc-C
Q 011049 96 GSPMMTRTS----TGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVF-G 170 (494)
Q Consensus 96 ~~~~~~~sp----DG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s-~ 170 (494)
. -+.+|| ||++++..... ...+.++|..+++........+... ......-. .
T Consensus 225 ~--~va~sp~~~~dg~~l~v~~~~--------------------~~~v~v~D~~t~~~~~~i~~~g~~~-~~~~~~~~~~ 281 (543)
T 1nir_A 225 R--SVESSKFKGYEDRYTIAGAYW--------------------PPQFAIMDGETLEPKQIVSTRGMTV-DTQTYHPEPR 281 (543)
T ss_dssp E--EEEECCSTTCTTTEEEEEEEE--------------------SSEEEEEETTTCCEEEEEECCEECS-SSCCEESCCC
T ss_pred c--eEEeCCCcCCCCCEEEEEEcc--------------------CCeEEEEeccccccceeecccCccc-CccccccCCc
Confidence 2 233899 99987765421 1137788888887655544322100 00000000 0
Q ss_pred CCcccccccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 171 QGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 171 ~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
-....+|+++..++++.. ....|++++..+.+
T Consensus 282 v~~i~~s~~~~~~~vs~~---~~g~i~vvd~~~~~ 313 (543)
T 1nir_A 282 VAAIIASHEHPEFIVNVK---ETGKVLLVNYKDID 313 (543)
T ss_dssp EEEEEECSSSSEEEEEET---TTTEEEEEECTTSS
T ss_pred eEEEEECCCCCEEEEEEC---CCCeEEEEEecCCC
Confidence 012357788877766543 34678889877654
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.04 Score=55.43 Aligned_cols=140 Identities=7% Similarity=0.033 Sum_probs=73.7
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
.+.|.++++ .+.....++.........+|+|||+.|+..+. ...+.+.+..+. ....+....... .
T Consensus 324 d~~i~~w~~---~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~----dg~v~~~~~~~~--~~~~~~~~~~~v-----~ 389 (577)
T 2ymu_A 324 DKTVKLWNR---NGQHLQTLTGHSSSVWGVAFSPDGQTIASASD----DKTVKLWNRNGQ--LLQTLTGHSSSV-----R 389 (577)
T ss_dssp TSCEEEEET---TSCEEEEECCCSSCEEEEEECTTSSEEEEEET----TSEEEEEETTCC--EEEEEECCSSCE-----E
T ss_pred CCeEEEEeC---CCCeeEEEeCCCCCEEEEEECCCCCEEEEEeC----CCEEEEEcCCCC--EEEEecCCCCCe-----E
Confidence 345667776 55555555554445556789999999886542 234555565443 222332211110 1
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.+.+||||++|+.... +. .+.++|.++.....+...... . ....|
T Consensus 390 --~~~~s~dg~~l~~~~~-------------------d~--~v~~~~~~~~~~~~~~~~~~~-----v-------~~~~~ 434 (577)
T 2ymu_A 390 --GVAFSPDGQTIASASD-------------------DK--TVKLWNRNGQLLQTLTGHSSS-----V-------WGVAF 434 (577)
T ss_dssp --EEEECTTSSCEEEEET-------------------TS--EEEEECTTCCEEEEEECCSSC-----E-------EEEEE
T ss_pred --EEEECCCCCEEEEEeC-------------------CC--EEEEEeCCCCEEEEecCCCCC-----e-------EEEEE
Confidence 2348999998876541 11 266667554333333222211 1 12367
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEe
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQI 209 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~l 209 (494)
+||+..++.... ...+.+++..+.....+
T Consensus 435 s~d~~~l~~~~~----d~~v~~w~~~~~~~~~~ 463 (577)
T 2ymu_A 435 SPDDQTIASASD----DKTVKLWNRNGQLLQTL 463 (577)
T ss_dssp CTTSSEEEEEET----TSEEEEEETTSCEEEEE
T ss_pred CCCCCEEEEEcC----CCEEEEEECCCCEEEEE
Confidence 888876654322 24566777654433333
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.025 Score=53.03 Aligned_cols=136 Identities=12% Similarity=-0.038 Sum_probs=73.0
Q ss_pred ccceeeeccCCCCCCCCCeeccc---cccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccccc
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHK---LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~---~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~ 92 (494)
..+.|.++|+ ..+++..... ........+|+|++..++.+... ...|.+.|+.++ +........
T Consensus 190 ~D~~v~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~---dg~v~~wd~~~~--~~~~~~~~h----- 256 (344)
T 4gqb_B 190 EDNRILLWDT---RCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDE---NGTVSLVDTKST--SCVLSSAVH----- 256 (344)
T ss_dssp TTSCEEEEET---TSSSCEEECC----CCCEEEEEECSSCTTEEEEEET---TSEEEEEESCC----CCEEEECC-----
T ss_pred cccccccccc---cccceeeeeecceeeccceeeeecCCCCcceEEecc---CCcEEEEECCCC--cEEEEEcCC-----
Confidence 4467888888 5555543221 12233467899976655544333 346777788765 333222211
Q ss_pred CCCCCC--ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccC
Q 011049 93 SDPGSP--MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFG 170 (494)
Q Consensus 93 ~~~~~~--~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~ 170 (494)
..+ .+.|||||.+++.+... ++ .|.++|+.+++..++-...+. +
T Consensus 257 ---~~~v~~v~fsp~g~~~lasgs~-----------------D~---~i~vwd~~~~~~~~~~~H~~~-----V------ 302 (344)
T 4gqb_B 257 ---SQCVTGLVFSPHSVPFLASLSE-----------------DC---SLAVLDSSLSELFRSQAHRDF-----V------ 302 (344)
T ss_dssp ---SSCEEEEEECSSSSCCEEEEET-----------------TS---CEEEECTTCCEEEEECCCSSC-----E------
T ss_pred ---CCCEEEEEEccCCCeEEEEEeC-----------------CC---eEEEEECCCCcEEEEcCCCCC-----E------
Confidence 122 24589999765554321 11 288889988765443221111 1
Q ss_pred CCcccccccCcEEEEEEecCCCCCeEEEEEcC
Q 011049 171 QGEEDINLNQLKILTSKESKTEITQYHILSWP 202 (494)
Q Consensus 171 ~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~ 202 (494)
....|+|++..++++.+. -..|..+++.
T Consensus 303 -~~v~~sp~~~~llas~s~---D~~v~~w~v~ 330 (344)
T 4gqb_B 303 -RDATWSPLNHSLLTTVGW---DHQVVHHVVP 330 (344)
T ss_dssp -EEEEECSSSTTEEEEEET---TSCEEEEECC
T ss_pred -EEEEEeCCCCeEEEEEcC---CCeEEEEECC
Confidence 124788998877766543 1345555544
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.032 Score=50.73 Aligned_cols=133 Identities=8% Similarity=0.089 Sum_probs=71.9
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCC-CCCCCc---eEeeecccccccC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPG-SKDVAP---RVLFDRVFENVYS 93 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~-~g~~~~---~~lt~~~~~~~~~ 93 (494)
+.||.++. + ++.+.+.........++|+|||+.+ +... ....|++++++ .+ .. +.+. .. .. .
T Consensus 153 ~~l~~~~~---~-g~~~~~~~~~~~~~gi~~s~dg~~l-v~~~---~~~~i~~~~~~~~g--~~~~~~~~~-~~-~~--~ 218 (296)
T 3e5z_A 153 RWVFRLAP---D-GTLSAPIRDRVKPNGLAFLPSGNLL-VSDT---GDNATHRYCLNARG--ETEYQGVHF-TV-EP--G 218 (296)
T ss_dssp CEEEEECT---T-SCEEEEECCCSSEEEEEECTTSCEE-EEET---TTTEEEEEEECSSS--CEEEEEEEE-CC-SS--S
T ss_pred cEEEEECC---C-CCEEEeecCCCCCccEEECCCCCEE-EEeC---CCCeEEEEEECCCC--cCcCCCeEe-eC-CC--C
Confidence 46666665 4 5555554443344578999999987 5432 24578888876 33 33 3333 21 11 1
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCc
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 173 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~ 173 (494)
.|.. +++++||+ |++.. . ..|.++|.++.....+....+. ..
T Consensus 219 ~p~~--i~~d~~G~-l~v~~-~---------------------~~v~~~~~~g~~~~~~~~~~~~-------------~~ 260 (296)
T 3e5z_A 219 KTDG--LRVDAGGL-IWASA-G---------------------DGVHVLTPDGDELGRVLTPQTT-------------SN 260 (296)
T ss_dssp CCCS--EEEBTTSC-EEEEE-T---------------------TEEEEECTTSCEEEEEECSSCC-------------CE
T ss_pred CCCe--EEECCCCC-EEEEc-C---------------------CeEEEECCCCCEEEEEECCCCc-------------ee
Confidence 1222 34788886 43332 1 1377788774333333222110 12
Q ss_pred ccc-cccCcEEEEEEecCCCCCeEEEEEcCCCcee
Q 011049 174 EDI-NLNQLKILTSKESKTEITQYHILSWPLKKSS 207 (494)
Q Consensus 174 ~~~-s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~ 207 (494)
..| ++|++.++++.. ..+|.++.++.+.+
T Consensus 261 ~~f~~~d~~~L~v~t~-----~~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 261 LCFGGPEGRTLYMTVS-----TEFWSIETNVRGLE 290 (296)
T ss_dssp EEEESTTSCEEEEEET-----TEEEEEECSCCBCC
T ss_pred EEEECCCCCEEEEEcC-----CeEEEEEccccccc
Confidence 245 467777776543 36899988765543
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=96.59 E-value=0.028 Score=59.26 Aligned_cols=85 Identities=8% Similarity=-0.056 Sum_probs=53.9
Q ss_pred CCccceeeeccCCCCCCCCC-eeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccccc
Q 011049 14 VSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~-~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~ 92 (494)
.+..+.|.++++ .+++. ..++........++|||||+.|+..+. ...|.+.++.++ +..........
T Consensus 31 ~~~~g~v~iwd~---~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----dg~i~vw~~~~~--~~~~~~~~~~~--- 98 (814)
T 3mkq_A 31 TLYSGRVEIWNY---ETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD----DFRIRVFNYNTG--EKVVDFEAHPD--- 98 (814)
T ss_dssp EETTSEEEEEET---TTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET----TSEEEEEETTTC--CEEEEEECCSS---
T ss_pred EeCCCEEEEEEC---CCCceEEEEecCCCcEEEEEEeCCCCEEEEEeC----CCeEEEEECCCC--cEEEEEecCCC---
Confidence 345678999998 54543 345555566678899999999888653 456788888766 33322221111
Q ss_pred CCCCCCceeeCCCCCEEEEEE
Q 011049 93 SDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 93 ~~~~~~~~~~spDG~~i~~~~ 113 (494)
.-..+.|+|||++|+...
T Consensus 99 ---~v~~~~~s~~~~~l~~~~ 116 (814)
T 3mkq_A 99 ---YIRSIAVHPTKPYVLSGS 116 (814)
T ss_dssp ---CEEEEEECSSSSEEEEEE
T ss_pred ---CEEEEEEeCCCCEEEEEc
Confidence 111244999999887654
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=96.58 E-value=0.13 Score=48.86 Aligned_cols=115 Identities=9% Similarity=0.029 Sum_probs=63.8
Q ss_pred cccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceE
Q 011049 43 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIY 122 (494)
Q Consensus 43 ~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~ 122 (494)
....+|||||+.|+..+. ...|.+.++.++ +.......... .-..+.|+|||+.++....
T Consensus 126 v~~v~~s~dg~~l~s~~~----d~~i~iwd~~~~--~~~~~~~~h~~------~v~~~~~~p~~~~l~s~s~-------- 185 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAE----DRLIRIWDIENR--KIVMILQGHEQ------DIYSLDYFPSGDKLVSGSG-------- 185 (393)
T ss_dssp EEEEEECTTSSEEEEEET----TSCEEEEETTTT--EEEEEECCCSS------CEEEEEECTTSSEEEEEET--------
T ss_pred EEEEEECCCCCEEEEEcC----CCeEEEEECCCC--cEEEEEccCCC------CEEEEEEcCCCCEEEEecC--------
Confidence 446789999998876542 345777777765 33333221111 0112448999998876541
Q ss_pred EEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccc-cCcEEEEEEecCCCCCeEEEEEc
Q 011049 123 ILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINL-NQLKILTSKESKTEITQYHILSW 201 (494)
Q Consensus 123 ~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~-d~~~~~~~~~s~~~p~~l~~~~~ 201 (494)
++ .+.++|+.+++.......... . ....++| ++..++ +... -..+.+++.
T Consensus 186 ----------d~---~v~iwd~~~~~~~~~~~~~~~-----v-------~~~~~~~~~~~~l~-~~s~---d~~v~iwd~ 236 (393)
T 1erj_A 186 ----------DR---TVRIWDLRTGQCSLTLSIEDG-----V-------TTVAVSPGDGKYIA-AGSL---DRAVRVWDS 236 (393)
T ss_dssp ----------TS---EEEEEETTTTEEEEEEECSSC-----E-------EEEEECSTTCCEEE-EEET---TSCEEEEET
T ss_pred ----------CC---cEEEEECCCCeeEEEEEcCCC-----c-------EEEEEECCCCCEEE-EEcC---CCcEEEEEC
Confidence 11 378889888765443332211 1 1236677 555444 3332 245777777
Q ss_pred CCCce
Q 011049 202 PLKKS 206 (494)
Q Consensus 202 ~~~~~ 206 (494)
.+++.
T Consensus 237 ~~~~~ 241 (393)
T 1erj_A 237 ETGFL 241 (393)
T ss_dssp TTCCE
T ss_pred CCCcE
Confidence 66543
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.023 Score=53.55 Aligned_cols=101 Identities=13% Similarity=0.004 Sum_probs=57.5
Q ss_pred ccceeeeccCCCCCCCCCeecc---ccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccccc
Q 011049 16 PRDIIYTQPAEPAEGEKPEILH---KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt---~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~ 92 (494)
..+.|.++|+ ..+++.... .........+|+||+..++.+... ...|.+.++..+ +..+.....
T Consensus 202 ~dg~v~~wd~---~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~---d~~i~~wd~~~~--~~~~~~~~~----- 268 (357)
T 4g56_B 202 EDGRILLWDT---RKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDE---TGNVSLVNIKNP--DSAQTSAVH----- 268 (357)
T ss_dssp TTSCEEECCT---TSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEES---SSCEEEEESSCG--GGCEEECCC-----
T ss_pred cCCceEEEEC---CCCceeeeeeeccccccccchhhhhcccceEEEeec---ccceeEEECCCC--cEeEEEecc-----
Confidence 4467888888 555544322 223334567899997665554433 345777787765 333322211
Q ss_pred CCCCCC--ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEE
Q 011049 93 SDPGSP--MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI 152 (494)
Q Consensus 93 ~~~~~~--~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l 152 (494)
..+ .+.|||||++++.+... ++ .+.++|+++++..+.
T Consensus 269 ---~~~v~~l~~sp~~~~~lasgs~-----------------D~---~i~iwd~~~~~~~~~ 307 (357)
T 4g56_B 269 ---SQNITGLAYSYHSSPFLASISE-----------------DC---TVAVLDADFSEVFRD 307 (357)
T ss_dssp ---SSCEEEEEECSSSSCCEEEEET-----------------TS---CEEEECTTSCEEEEE
T ss_pred ---ceeEEEEEEcCCCCCEEEEEeC-----------------CC---EEEEEECCCCcEeEE
Confidence 122 24589999765554321 12 288889988765443
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=96.56 E-value=0.05 Score=48.69 Aligned_cols=117 Identities=8% Similarity=0.026 Sum_probs=64.8
Q ss_pred ccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEE
Q 011049 44 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYI 123 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~ 123 (494)
...+++||++.|+++..... ...|+++++++. ..+.+..... ..|.. +.++||+++|++....
T Consensus 125 ~~i~vd~~~g~lyv~~~~~~-~~~I~~~~~dg~--~~~~~~~~~~----~~P~g--ia~d~~~~~lyv~d~~-------- 187 (267)
T 1npe_A 125 RGIVTDPVRGNLYWTDWNRD-NPKIETSHMDGT--NRRILAQDNL----GLPNG--LTFDAFSSQLCWVDAG-------- 187 (267)
T ss_dssp EEEEEETTTTEEEEEECCSS-SCEEEEEETTSC--CCEEEECTTC----SCEEE--EEEETTTTEEEEEETT--------
T ss_pred cEEEEeeCCCEEEEEECCCC-CcEEEEEecCCC--CcEEEEECCC----CCCcE--EEEcCCCCEEEEEECC--------
Confidence 35679998888777643211 468999999875 4444432211 11222 3389999888776421
Q ss_pred EEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 124 LLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 124 ~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
...|+++|++++..+.+...... + ..++.|++.++++... ...+++++.++
T Consensus 188 ------------~~~I~~~~~~g~~~~~~~~~~~~-----P---------~gi~~d~~~lyva~~~---~~~v~~~d~~~ 238 (267)
T 1npe_A 188 ------------THRAECLNPAQPGRRKVLEGLQY-----P---------FAVTSYGKNLYYTDWK---TNSVIAMDLAI 238 (267)
T ss_dssp ------------TTEEEEEETTEEEEEEEEECCCS-----E---------EEEEEETTEEEEEETT---TTEEEEEETTT
T ss_pred ------------CCEEEEEecCCCceEEEecCCCC-----c---------eEEEEeCCEEEEEECC---CCeEEEEeCCC
Confidence 12488888886544333221100 0 1234455566654332 24678888766
Q ss_pred Cce
Q 011049 204 KKS 206 (494)
Q Consensus 204 ~~~ 206 (494)
++.
T Consensus 239 g~~ 241 (267)
T 1npe_A 239 SKE 241 (267)
T ss_dssp TEE
T ss_pred CCc
Confidence 543
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=96.55 E-value=0.018 Score=53.48 Aligned_cols=140 Identities=5% Similarity=-0.050 Sum_probs=76.5
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
.+.|+.++. ++++.+.++. +.......|+|||+.++.. ...|++++++++ +.+.+...........+.
T Consensus 70 ~~~i~~~d~---~~~~~~~~~~-~~~v~~i~~~~dg~l~v~~------~~gl~~~d~~~g--~~~~~~~~~~~~~~~~~~ 137 (326)
T 2ghs_A 70 ERELHELHL---ASGRKTVHAL-PFMGSALAKISDSKQLIAS------DDGLFLRDTATG--VLTLHAELESDLPGNRSN 137 (326)
T ss_dssp GTEEEEEET---TTTEEEEEEC-SSCEEEEEEEETTEEEEEE------TTEEEEEETTTC--CEEEEECSSTTCTTEEEE
T ss_pred CCEEEEEEC---CCCcEEEEEC-CCcceEEEEeCCCeEEEEE------CCCEEEEECCCC--cEEEEeeCCCCCCCCCCC
Confidence 456777777 6565544432 2345567899999865543 234999999877 555554322110000011
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.+.++|||+ +++..... ........|++++ +++.+.+...... .....|
T Consensus 138 --~i~~d~~G~-l~v~~~~~--------------~~~~~~~~l~~~~--~g~~~~~~~~~~~------------~~~i~~ 186 (326)
T 2ghs_A 138 --DGRMHPSGA-LWIGTMGR--------------KAETGAGSIYHVA--KGKVTKLFADISI------------PNSICF 186 (326)
T ss_dssp --EEEECTTSC-EEEEEEET--------------TCCTTCEEEEEEE--TTEEEEEEEEESS------------EEEEEE
T ss_pred --CEEECCCCC-EEEEeCCC--------------cCCCCceEEEEEe--CCcEEEeeCCCcc------------cCCeEE
Confidence 133799997 44443210 0011123588888 4655544321110 012378
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcC
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWP 202 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~ 202 (494)
++|++.+++.... ...|++++.+
T Consensus 187 s~dg~~lyv~~~~---~~~I~~~d~~ 209 (326)
T 2ghs_A 187 SPDGTTGYFVDTK---VNRLMRVPLD 209 (326)
T ss_dssp CTTSCEEEEEETT---TCEEEEEEBC
T ss_pred cCCCCEEEEEECC---CCEEEEEEcc
Confidence 8999877775432 3578888875
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.019 Score=53.46 Aligned_cols=142 Identities=8% Similarity=-0.073 Sum_probs=74.9
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeec-------cceEEEEEcCCCCCCCceEeeecccc
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT-------SQTRTWLVCPGSKDVAPRVLFDRVFE 89 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~-------~~~~~~~~~~~~g~~~~~~lt~~~~~ 89 (494)
.+.|+++|. ++++..............+++|||+ +++.+..+. ....|+++++.++ +.......+..
T Consensus 151 ~~~v~viD~---~t~~~~~~i~~g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~--~v~~~~~~~~g 224 (328)
T 3dsm_A 151 QNRILKIDT---ETDKVVDELTIGIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETF--TVEKQFKFKLG 224 (328)
T ss_dssp CCEEEEEET---TTTEEEEEEECSSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTT--EEEEEEECCTT
T ss_pred CCEEEEEEC---CCCeEEEEEEcCCCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCCC--eEEEEEecCCC
Confidence 456777776 5454333222222335678999998 565553220 0268999999876 33322221111
Q ss_pred cccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEE-EeeCcchhhhheeeec
Q 011049 90 NVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI-WESNREKYFETAVALV 168 (494)
Q Consensus 90 ~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l-~~~~~~~~~~~~~~~~ 168 (494)
. .|. -++++|||+++++.. . .++++|+++++.... +...+. ..+.
T Consensus 225 ~---~p~--~la~~~d~~~lyv~~--------------------~---~v~~~d~~t~~~~~~~~~~~~~---~~p~--- 270 (328)
T 3dsm_A 225 D---WPS--EVQLNGTRDTLYWIN--------------------N---DIWRMPVEADRVPVRPFLEFRD---TKYY--- 270 (328)
T ss_dssp C---CCE--EEEECTTSCEEEEES--------------------S---SEEEEETTCSSCCSSCSBCCCS---SCEE---
T ss_pred C---Cce--eEEEecCCCEEEEEc--------------------c---EEEEEECCCCceeeeeeecCCC---CceE---
Confidence 0 122 234899999876642 1 388899888764210 000000 0011
Q ss_pred cCCCcccccccCcEEEEEEe-cCCCCCeEEEEEcC
Q 011049 169 FGQGEEDINLNQLKILTSKE-SKTEITQYHILSWP 202 (494)
Q Consensus 169 s~~~~~~~s~d~~~~~~~~~-s~~~p~~l~~~~~~ 202 (494)
...++|+++.++++.. +......+++++.+
T Consensus 271 ----gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 271 ----GLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp ----EEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred ----EEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 1267776666666541 11234578888876
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=96.55 E-value=0.036 Score=53.01 Aligned_cols=146 Identities=7% Similarity=-0.037 Sum_probs=80.8
Q ss_pred ccceeeeccCCCCCCC-------C-CeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecc
Q 011049 16 PRDIIYTQPAEPAEGE-------K-PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV 87 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~-------~-~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~ 87 (494)
..+.|.++++ ..+ + ...+..........+|+|||+.++++...+ ..|.+.++..+ +........
T Consensus 102 ~dg~v~vw~~---~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d---g~i~iwd~~~~--~~~~~~~~~ 173 (402)
T 2aq5_A 102 EDCTVMVWEI---PDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD---NVILVWDVGTG--AAVLTLGPD 173 (402)
T ss_dssp TTSEEEEEEC---CTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT---SCEEEEETTTT--EEEEEECTT
T ss_pred CCCeEEEEEc---cCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC---CEEEEEECCCC--CccEEEecC
Confidence 3567888888 443 2 233444455566789999996555555433 35777787765 333322101
Q ss_pred cccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEE-eeCcchhhhheee
Q 011049 88 FENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIW-ESNREKYFETAVA 166 (494)
Q Consensus 88 ~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~~~~~~~~ 166 (494)
.... .-..+.|+|||+.++.... ++ .+.++|+.+++..... .....
T Consensus 174 ~~~~----~v~~~~~~~~~~~l~~~~~------------------d~---~i~iwd~~~~~~~~~~~~~~~~-------- 220 (402)
T 2aq5_A 174 VHPD----TIYSVDWSRDGALICTSCR------------------DK---RVRVIEPRKGTVVAEKDRPHEG-------- 220 (402)
T ss_dssp TCCS----CEEEEEECTTSSCEEEEET------------------TS---EEEEEETTTTEEEEEEECSSCS--------
T ss_pred CCCC----ceEEEEECCCCCEEEEEec------------------CC---cEEEEeCCCCceeeeeccCCCC--------
Confidence 1110 1112459999998877641 11 3888999887654443 11111
Q ss_pred eccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 167 LVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 167 ~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
.......|++++..++ +..+...-..+.++++.+.+
T Consensus 221 --~~~~~~~~~~~~~~l~-~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 221 --TRPVHAVFVSEGKILT-TGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp --SSCCEEEECSTTEEEE-EEECTTCCEEEEEEETTBCS
T ss_pred --CcceEEEEcCCCcEEE-EeccCCCCceEEEEcCcccc
Confidence 0011246788876444 33222334678888877654
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=96.53 E-value=0.036 Score=50.75 Aligned_cols=140 Identities=11% Similarity=0.077 Sum_probs=80.4
Q ss_pred CccceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
+..+.|.++++ ..++... +...........|+|||+.|+..+. ...|.+.++..+ +...... ..
T Consensus 84 ~~d~~i~vwd~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~----d~~i~iwd~~~~--~~~~~~~--~~---- 148 (312)
T 4ery_A 84 SDDKTLKIWDV---SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF----DESVRIWDVKTG--KCLKTLP--AH---- 148 (312)
T ss_dssp ETTSEEEEEET---TTCCEEEEEECCSSCEEEEEECSSSSEEEEEET----TSCEEEEETTTC--CEEEEEC--CC----
T ss_pred CCCCEEEEEEC---CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeC----CCcEEEEECCCC--EEEEEec--CC----
Confidence 34567888888 5555433 3333444556789999998776542 345777787765 3222221 11
Q ss_pred CCCCC--ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCC
Q 011049 94 DPGSP--MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQ 171 (494)
Q Consensus 94 ~~~~~--~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~ 171 (494)
..+ .+.|+|||+.++.... ++ .+.++|+.+++.......... ...
T Consensus 149 --~~~v~~~~~~~~~~~l~~~~~------------------d~---~i~~wd~~~~~~~~~~~~~~~----~~~------ 195 (312)
T 4ery_A 149 --SDPVSAVHFNRDGSLIVSSSY------------------DG---LCRIWDTASGQCLKTLIDDDN----PPV------ 195 (312)
T ss_dssp --SSCEEEEEECTTSSEEEEEET------------------TS---CEEEEETTTCCEEEEECCSSC----CCE------
T ss_pred --CCcEEEEEEcCCCCEEEEEeC------------------CC---cEEEEECCCCceeeEEeccCC----Cce------
Confidence 122 2348999997766541 11 388889888764433221111 000
Q ss_pred CcccccccCcEEEEEEecCCCCCeEEEEEcCCCce
Q 011049 172 GEEDINLNQLKILTSKESKTEITQYHILSWPLKKS 206 (494)
Q Consensus 172 ~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~ 206 (494)
....|+|++..++.... -..+.+++..+++.
T Consensus 196 ~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~~ 226 (312)
T 4ery_A 196 SFVKFSPNGKYILAATL----DNTLKLWDYSKGKC 226 (312)
T ss_dssp EEEEECTTSSEEEEEET----TTEEEEEETTTTEE
T ss_pred EEEEECCCCCEEEEEcC----CCeEEEEECCCCcE
Confidence 12378888887665332 24688888876654
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.023 Score=52.75 Aligned_cols=131 Identities=12% Similarity=-0.015 Sum_probs=71.6
Q ss_pred Ceeccccccc-cccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEE
Q 011049 33 PEILHKLDLR-FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIA 111 (494)
Q Consensus 33 ~~~lt~~~~~-~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~ 111 (494)
++.+...... -.+|+|+||++.++++... ...|++++++++ +.+.+.. +.. +. .+.|+|||+.++.
T Consensus 40 ~~~~~~~~~~~~egp~~~~~~~~l~~~d~~---~~~i~~~d~~~~--~~~~~~~-~~~-----v~--~i~~~~dg~l~v~ 106 (326)
T 2ghs_A 40 GRVLDETPMLLGEGPTFDPASGTAWWFNIL---ERELHELHLASG--RKTVHAL-PFM-----GS--ALAKISDSKQLIA 106 (326)
T ss_dssp CEEEECSCCSBEEEEEEETTTTEEEEEEGG---GTEEEEEETTTT--EEEEEEC-SSC-----EE--EEEEEETTEEEEE
T ss_pred eEEeeccCCCCCcCCeEeCCCCEEEEEECC---CCEEEEEECCCC--cEEEEEC-CCc-----ce--EEEEeCCCeEEEE
Confidence 3445443332 2479999998888887432 458999999876 4443322 110 11 1237899875443
Q ss_pred EEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecC-
Q 011049 112 KIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESK- 190 (494)
Q Consensus 112 ~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~- 190 (494)
.. . .|+++|.++++.+.+.......-.... ....++++|+ +++.....
T Consensus 107 ~~--------------------~---gl~~~d~~~g~~~~~~~~~~~~~~~~~-------~~i~~d~~G~-l~v~~~~~~ 155 (326)
T 2ghs_A 107 SD--------------------D---GLFLRDTATGVLTLHAELESDLPGNRS-------NDGRMHPSGA-LWIGTMGRK 155 (326)
T ss_dssp ET--------------------T---EEEEEETTTCCEEEEECSSTTCTTEEE-------EEEEECTTSC-EEEEEEETT
T ss_pred EC--------------------C---CEEEEECCCCcEEEEeeCCCCCCCCCC-------CCEEECCCCC-EEEEeCCCc
Confidence 21 1 288899888877665432211000000 1236778886 44433321
Q ss_pred --CCCCeEEEEEcCCCceeEe
Q 011049 191 --TEITQYHILSWPLKKSSQI 209 (494)
Q Consensus 191 --~~p~~l~~~~~~~~~~~~l 209 (494)
.....||+++ +++.+.+
T Consensus 156 ~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 156 AETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp CCTTCEEEEEEE--TTEEEEE
T ss_pred CCCCceEEEEEe--CCcEEEe
Confidence 1234688888 3454443
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=96.43 E-value=0.023 Score=53.90 Aligned_cols=79 Identities=11% Similarity=0.078 Sum_probs=47.2
Q ss_pred ceecCCCceEEEEeeeec------cceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCcc
Q 011049 46 VSWCDDSLALVNETWYKT------SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDE 119 (494)
Q Consensus 46 p~wspDg~~i~f~~~~~~------~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~ 119 (494)
..++|||+.++....... ..++|+++|+.++ +. +..-+... .|.... |||||++++|..+..
T Consensus 272 ~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~--~v--v~~i~~g~---~p~~i~--~s~Dg~~~l~v~~~~--- 339 (373)
T 2mad_H 272 VAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG--QT--SSQISLGH---DVDAIS--VAQDGGPDLYALSAG--- 339 (373)
T ss_pred EEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC--EE--EEEEECCC---CcCeEE--ECCCCCeEEEEEcCC---
Confidence 457888887666543110 1468999999876 33 22212111 112223 899999777776310
Q ss_pred ceEEEEccCCCCCCCCCCceEeeecCCCceEEE
Q 011049 120 QIYILLNGRGFTPEGNIPFLDLFDINTGSKERI 152 (494)
Q Consensus 120 ~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l 152 (494)
. ..|.++|+++++....
T Consensus 340 -------------~---~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 340 -------------T---EVLHIYDAGAGDQDQS 356 (373)
T ss_pred -------------C---CeEEEEECCCCCEEee
Confidence 1 2499999999876554
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=96.42 E-value=0.028 Score=53.21 Aligned_cols=139 Identities=14% Similarity=0.046 Sum_probs=76.8
Q ss_pred CccceeeeccCCCCCCCCCeeccccc---cccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccc
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLD---LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV 91 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~---~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~ 91 (494)
+..+.|.++|+ .+.....+.... ......+|+|||+.|+..+ ....|++.++.+. ....+......
T Consensus 138 ~~d~~i~iwd~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~d~~i~i~d~~~~--~~~~~~~h~~~-- 206 (383)
T 3ei3_B 138 SIRGATTLRDF---SGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGD----STGRLLLLGLDGH--EIFKEKLHKAK-- 206 (383)
T ss_dssp ETTTEEEEEET---TSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEE----TTSEEEEEETTSC--EEEEEECSSSC--
T ss_pred eCCCEEEEEEC---CCCceEEEeccCCCCCCeEEEEECCCCCEEEEEC----CCCCEEEEECCCC--EEEEeccCCCc--
Confidence 34567888888 554444444332 3345778999999877653 2457888887543 32333222211
Q ss_pred cCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCC----CceEEEEeeCcchhhhheeee
Q 011049 92 YSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINT----GSKERIWESNREKYFETAVAL 167 (494)
Q Consensus 92 ~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~----g~~~~l~~~~~~~~~~~~~~~ 167 (494)
-..+.|+|||+.+++.... ++ .+.++|+.+ ++........+. .
T Consensus 207 -----v~~~~~~~~~~~~l~s~~~-----------------d~---~i~iwd~~~~~~~~~~~~~~~~~~~-----v--- 253 (383)
T 3ei3_B 207 -----VTHAEFNPRCDWLMATSSV-----------------DA---TVKLWDLRNIKDKNSYIAEMPHEKP-----V--- 253 (383)
T ss_dssp -----EEEEEECSSCTTEEEEEET-----------------TS---EEEEEEGGGCCSTTCEEEEEECSSC-----E---
T ss_pred -----EEEEEECCCCCCEEEEEeC-----------------CC---EEEEEeCCCCCcccceEEEecCCCc-----e---
Confidence 1124499999844444321 11 377778776 332222221111 1
Q ss_pred ccCCCcccccc-cCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 168 VFGQGEEDINL-NQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 168 ~s~~~~~~~s~-d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
....|+| ++..++.... -..+.++++.+++
T Consensus 254 ----~~~~~s~~~~~~l~~~~~----d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 254 ----NAAYFNPTDSTKLLTTDQ----RNEIRVYSSYDWS 284 (383)
T ss_dssp ----EEEEECTTTSCEEEEEES----SSEEEEEETTBTT
T ss_pred ----EEEEEcCCCCCEEEEEcC----CCcEEEEECCCCc
Confidence 1247888 8876654332 2568888877654
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=96.40 E-value=0.025 Score=53.44 Aligned_cols=89 Identities=10% Similarity=-0.013 Sum_probs=48.9
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeee------ccceEEEEEcCCCCCCCceEeeeccccc
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYK------TSQTRTWLVCPGSKDVAPRVLFDRVFEN 90 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~------~~~~~~~~~~~~~g~~~~~~lt~~~~~~ 90 (494)
.+.||++|. +.++..........- ..+|||||+.++...... .....|.++|+.+. +...-.......
T Consensus 30 d~~v~v~D~---~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~--~~~~~i~~~~~~ 103 (361)
T 2oiz_A 30 ESRVHVYDY---TNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL--TFEKEISLPPKR 103 (361)
T ss_dssp GCEEEEEET---TTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC--CEEEEEEECTTB
T ss_pred cCeEEEEEC---CCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC--cEEEEEEcCccc
Confidence 357888887 556544322222222 779999999977765321 12456889998765 332222111000
Q ss_pred c--cCCCCCCceeeCCCCCEEEEEE
Q 011049 91 V--YSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 91 ~--~~~~~~~~~~~spDG~~i~~~~ 113 (494)
. ...|. .+.+||||++++...
T Consensus 104 ~~~g~~p~--~i~~spdg~~l~v~n 126 (361)
T 2oiz_A 104 VQGLNYDG--LFRQTTDGKFIVLQN 126 (361)
T ss_dssp CCBCCCGG--GEEECTTSSEEEEEE
T ss_pred cccCCCcc--eEEECCCCCEEEEEC
Confidence 0 00122 233899999887654
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.18 Score=45.58 Aligned_cols=147 Identities=12% Similarity=-0.023 Sum_probs=74.1
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCC---chhHHHHHhCCeEEEeCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMT---PTSSLIFLARRFAVLAGPS 305 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~G~~v~~~~~ 305 (494)
+...++..+..|++...+ ++.. .|+|+|+-|||..+.-.....--+|-.+..-. ......|.... .++.++.
T Consensus 28 v~v~~~~~lFywf~es~~-~p~~---~Pl~lWlnGGPGcSS~~g~~~E~GP~~~~~~~~~l~~N~~sW~~~a-n~lfiD~ 102 (300)
T 4az3_A 28 LKGSGSKHLHYWFVESQK-DPEN---SPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIA-NVLYLES 102 (300)
T ss_dssp EECSTTEEEEEEEECCSS-CTTT---SCEEEEECCTTTBCTHHHHHHTTSSEEECTTSSCEEECTTCGGGSS-EEEEECC
T ss_pred eecCCCCeEEEEEEEcCC-CCCC---CCEEEEECCCCcHHHHHHHHhcCCCceecCCCccccccCccHHhhh-cchhhcC
Confidence 344567788888886543 2332 79999999998543210000000110000000 00000112222 2232232
Q ss_pred CCCCCCCCCC--CCchhHHHHHHHHHHHHH-HHHHcCCCCCCcEEEEecChHHHHHHHHHHhC---C-CceeEEEeCCCC
Q 011049 306 IPIIGEGDKL--PNDRFVEQLVSSAEAAVE-EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---P-HLFCCGIARSGS 378 (494)
Q Consensus 306 ~~~~g~g~~~--~~~~~~~~~~~d~~~~v~-~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~---p-~~~~a~v~~~~~ 378 (494)
.-..|+.... .......+...|+...+. |+...+......+.|+|.||||..+..+|..- + =.+++++...|+
T Consensus 103 PvGtGfSy~~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGNg~ 182 (300)
T 4az3_A 103 PAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 182 (300)
T ss_dssp STTSTTCEETTCCCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred CCcccccccCCCcccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecCCc
Confidence 2223332211 111222344566666654 55554444567899999999998887776432 1 246888888887
Q ss_pred CC
Q 011049 379 YN 380 (494)
Q Consensus 379 ~~ 380 (494)
++
T Consensus 183 ~d 184 (300)
T 4az3_A 183 SS 184 (300)
T ss_dssp SB
T ss_pred cC
Confidence 66
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.36 E-value=0.065 Score=51.38 Aligned_cols=58 Identities=12% Similarity=-0.110 Sum_probs=31.7
Q ss_pred CccceeeeccCCCCCCCCCee-cccccccccc-----ceecCCCceEEEEeeeec--cceEEEEEcCCCC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEI-LHKLDLRFRS-----VSWCDDSLALVNETWYKT--SQTRTWLVCPGSK 76 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~-----p~wspDg~~i~f~~~~~~--~~~~~~~~~~~~g 76 (494)
.+.++|.++|+ ++++..+ +.-+. .... ++|+|||+..+....-+. -.++|+++..++|
T Consensus 225 ~~~d~V~v~D~---~~~k~~~tI~vg~-~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g 290 (462)
T 2ece_A 225 RYGNRIHFWDL---RKRKRIHSLTLGE-ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDG 290 (462)
T ss_dssp HSCCEEEEEET---TTTEEEEEEESCT-TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETT
T ss_pred ccCCEEEEEEC---CCCcEeeEEecCC-CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCC
Confidence 45789999998 5443332 22221 1122 357999998665543000 1356776655544
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=96.36 E-value=0.34 Score=44.48 Aligned_cols=150 Identities=7% Similarity=-0.093 Sum_probs=83.1
Q ss_pred CccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCC--CCceEeeeccccccc
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKD--VAPRVLFDRVFENVY 92 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~--~~~~~lt~~~~~~~~ 92 (494)
+.+..|..+++ ++.+...+...-..-..+.|.++++.|+++-. ....|+++++++.. ...+.+.... .
T Consensus 7 ~~~~~I~~i~~---~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~---~~~~I~~~~~~g~~~~~~~~~~~~~~----~ 76 (316)
T 1ijq_A 7 TNRHEVRKMTL---DRSEYTSLIPNLRNVVALDTEVASNRIYWSDL---SQRMICSTQLDRAHGVSSYDTVISRD----I 76 (316)
T ss_dssp ECBSSEEEEET---TSCCCEEEECSCSSEEEEEEETTTTEEEEEET---TTTEEEEEEC--------CEEEECSS----C
T ss_pred ECCCeEEEEEC---CCcceEehhcCCCceEEEEEEeCCCEEEEEEC---CCCcEEEEECCCCCCCcccEEEEeCC----C
Confidence 45667888998 66665555444334457899998888887632 25689999998720 0223332211 1
Q ss_pred CCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCC
Q 011049 93 SDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQG 172 (494)
Q Consensus 93 ~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~ 172 (494)
..|.... ..+++..|++... ....|.++++++...+.+...... .+.
T Consensus 77 ~~p~gla--vd~~~~~ly~~d~--------------------~~~~I~~~~~~g~~~~~~~~~~~~----~P~------- 123 (316)
T 1ijq_A 77 QAPDGLA--VDWIHSNIYWTDS--------------------VLGTVSVADTKGVKRKTLFRENGS----KPR------- 123 (316)
T ss_dssp SCCCEEE--EETTTTEEEEEET--------------------TTTEEEEEETTSSSEEEEEECTTC----CEE-------
T ss_pred CCcCEEE--EeecCCeEEEEEC--------------------CCCEEEEEeCCCCceEEEEECCCC----Ccc-------
Confidence 1122222 5666666766531 112478888877655444332111 111
Q ss_pred cccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEe
Q 011049 173 EEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQI 209 (494)
Q Consensus 173 ~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~l 209 (494)
...++|+++.++++... ..+.|++++.++...+.+
T Consensus 124 ~iavdp~~g~ly~~d~~--~~~~I~~~~~dG~~~~~~ 158 (316)
T 1ijq_A 124 AIVVDPVHGFMYWTDWG--TPAKIKKGGLNGVDIYSL 158 (316)
T ss_dssp EEEEETTTTEEEEEECS--SSCEEEEEETTSCCEEEE
T ss_pred eEEeCCCCCEEEEEccC--CCCeEEEEcCCCCCeEEE
Confidence 12566767777776532 246899999877655544
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=96.35 E-value=0.067 Score=49.77 Aligned_cols=141 Identities=9% Similarity=-0.019 Sum_probs=77.3
Q ss_pred ccceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
..+.|.++|+ ..++... +..........+|+|||+.|+-.+ . ...|.+.++..+ ...........
T Consensus 162 ~d~~i~~wd~---~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~-~---d~~v~~wd~~~~--~~~~~~~~h~~----- 227 (340)
T 1got_B 162 GDTTCALWDI---ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGA-C---DASAKLWDVREG--MCRQTFTGHES----- 227 (340)
T ss_dssp TTSCEEEEET---TTTEEEEEECCCSSCEEEEEECTTSSEEEEEE-T---TSCEEEEETTTC--SEEEEECCCSS-----
T ss_pred CCCcEEEEEC---CCCcEEEEEcCCCCceEEEEECCCCCEEEEEe-C---CCcEEEEECCCC--eeEEEEcCCcC-----
Confidence 3467888888 5554433 333444556788999998766543 2 335666677655 33332221111
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcc
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEE 174 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~ 174 (494)
.-..+.|+|||+.++.... ++ .+.++|+.+++........... ... ...
T Consensus 228 -~v~~v~~~p~~~~l~s~s~------------------d~---~v~iwd~~~~~~~~~~~~~~~~--~~v-------~~~ 276 (340)
T 1got_B 228 -DINAICFFPNGNAFATGSD------------------DA---TCRLFDLRADQELMTYSHDNII--CGI-------TSV 276 (340)
T ss_dssp -CEEEEEECTTSSEEEEEET------------------TS---CEEEEETTTTEEEEEECCTTCC--SCE-------EEE
T ss_pred -CEEEEEEcCCCCEEEEEcC------------------CC---cEEEEECCCCcEEEEEccCCcc--cce-------EEE
Confidence 0112459999998776541 11 2788888876543333222110 001 123
Q ss_pred cccccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 175 DINLNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 175 ~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
.|+|++..++.... -..+.+++..+++
T Consensus 277 ~~s~~g~~l~~g~~----d~~i~vwd~~~~~ 303 (340)
T 1got_B 277 SFSKSGRLLLAGYD----DFNCNVWDALKAD 303 (340)
T ss_dssp EECTTSSEEEEEET----TSEEEEEETTTCC
T ss_pred EECCCCCEEEEECC----CCeEEEEEcccCc
Confidence 78899876654332 2467777765543
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.021 Score=54.68 Aligned_cols=147 Identities=5% Similarity=0.018 Sum_probs=77.9
Q ss_pred CccceeeeccCCCCCCCCCeecccc-------ccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecc
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKL-------DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV 87 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~-------~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~ 87 (494)
+..+.|.++|+ ..++....... .......+|+|||+.++++...++....|.+.++..+. .+......
T Consensus 185 ~~dg~v~iwd~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~-~~~~~~~~- 259 (416)
T 2pm9_A 185 GSSNFASIWDL---KAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN-TPLQTLNQ- 259 (416)
T ss_dssp SSSSCEEEEET---TTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT-SCSBCCCS-
T ss_pred cCCCCEEEEEC---CCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC-CCcEEeec-
Confidence 45567888888 55544433222 34456788999986555554332212367788877642 22222110
Q ss_pred cccccCCCCCCceeeCC-CCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheee
Q 011049 88 FENVYSDPGSPMMTRTS-TGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVA 166 (494)
Q Consensus 88 ~~~~~~~~~~~~~~~sp-DG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~ 166 (494)
.... .-..+.|+| ||+.++.... ++ .+.++|+.+++..........
T Consensus 260 ~~~~----~v~~~~~s~~~~~~l~s~~~------------------dg---~v~~wd~~~~~~~~~~~~~~~-------- 306 (416)
T 2pm9_A 260 GHQK----GILSLDWCHQDEHLLLSSGR------------------DN---TVLLWNPESAEQLSQFPARGN-------- 306 (416)
T ss_dssp CCSS----CEEEEEECSSCSSCEEEEES------------------SS---EEEEECSSSCCEEEEEECSSS--------
T ss_pred CccC----ceeEEEeCCCCCCeEEEEeC------------------CC---CEEEeeCCCCccceeecCCCC--------
Confidence 1110 011234899 8887766541 11 388888888765443332211
Q ss_pred eccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 167 LVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 167 ~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
.-....|+|++..++++... -..+.++++.+.+
T Consensus 307 ---~v~~~~~s~~~~~~l~s~~~---d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 307 ---WCFKTKFAPEAPDLFACASF---DNKIEVQTLQNLT 339 (416)
T ss_dssp ---CCCCEEECTTCTTEEEECCS---SSEEEEEESCCCC
T ss_pred ---ceEEEEECCCCCCEEEEEec---CCcEEEEEccCCC
Confidence 01234788988445554332 3457777765543
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.031 Score=54.43 Aligned_cols=142 Identities=8% Similarity=0.033 Sum_probs=78.5
Q ss_pred ccceeeeccCCCCC--CCCCeecc---ccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCc--e-Eeeecc
Q 011049 16 PRDIIYTQPAEPAE--GEKPEILH---KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAP--R-VLFDRV 87 (494)
Q Consensus 16 ~~~~i~~~~~~~~~--~~~~~~lt---~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~--~-~lt~~~ 87 (494)
..+.|.++++ . +++..+.. .........+|+|||+.|+..+. ...++++++..+.... . .+....
T Consensus 123 ~dg~v~iwd~---~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~----~g~v~~~~~~~~~~~~~~~~~~~~h~ 195 (450)
T 2vdu_B 123 SDKSLLVFDV---DKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK----FGDVYSIDINSIPEEKFTQEPILGHV 195 (450)
T ss_dssp GGTEEEEEEE---CSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET----TSEEEEEETTSCCCSSCCCCCSEECS
T ss_pred CCCeEEEEEC---cCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC----CCcEEEEecCCcccccccceeeeccc
Confidence 3467778887 4 45544433 22344557899999999887642 4578999887652111 0 111111
Q ss_pred cccccCCCCCCceeeCCC---CCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhhe
Q 011049 88 FENVYSDPGSPMMTRTST---GTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETA 164 (494)
Q Consensus 88 ~~~~~~~~~~~~~~~spD---G~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 164 (494)
.. --.+.|+|| |+.|+.... ++ .+.++|+.+++....+...-. ..
T Consensus 196 ~~-------v~~~~~sp~~~~~~~l~s~~~------------------d~---~i~vwd~~~~~~~~~~~~~h~----~~ 243 (450)
T 2vdu_B 196 SM-------LTDVHLIKDSDGHQFIITSDR------------------DE---HIKISHYPQCFIVDKWLFGHK----HF 243 (450)
T ss_dssp SC-------EEEEEEEECTTSCEEEEEEET------------------TS---CEEEEEESCTTCEEEECCCCS----SC
T ss_pred Cc-------eEEEEEcCCCCCCcEEEEEcC------------------CC---cEEEEECCCCceeeeeecCCC----Cc
Confidence 10 012348999 876665531 11 388888887765433221100 00
Q ss_pred eeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCcee
Q 011049 165 VALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 207 (494)
Q Consensus 165 ~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~ 207 (494)
.....|+ |+..++.. . .-..+.++++.+++..
T Consensus 244 ------v~~~~~s-d~~~l~s~-~---~d~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 244 ------VSSICCG-KDYLLLSA-G---GDDKIFAWDWKTGKNL 275 (450)
T ss_dssp ------EEEEEEC-STTEEEEE-E---SSSEEEEEETTTCCEE
T ss_pred ------eEEEEEC-CCCEEEEE-e---CCCeEEEEECCCCcEe
Confidence 0123677 77766543 2 2357888898877643
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=96.32 E-value=0.1 Score=49.35 Aligned_cols=147 Identities=10% Similarity=-0.016 Sum_probs=75.0
Q ss_pred cceeeeccCCCCC-CCCC-eeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccc-cC
Q 011049 17 RDIIYTQPAEPAE-GEKP-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV-YS 93 (494)
Q Consensus 17 ~~~i~~~~~~~~~-~~~~-~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~-~~ 93 (494)
.+.|.++|+ . ++++ ..+..........+|+|||+.|+-.+. ...+.+.++..+ ............. ..
T Consensus 227 D~~v~~wd~---~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~----D~~i~lwd~~~~--~~~~~~~~~~~~~~~~ 297 (380)
T 3iz6_a 227 DTTVRLWDL---RITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSD----DGTCRLFDMRTG--HQLQVYNREPDRNDNE 297 (380)
T ss_dssp TSCEEEEET---TTTCCCCEEECCCSSCCCEEEECTTSSEEEEECS----SSCEEEEETTTT--EEEEEECCCCSSSCCS
T ss_pred CCeEEEEEC---CCCCcceEEECCcCCCeEEEEEecCCCeEEEEcC----CCeEEEEECCCC--cEEEEecccccccccc
Confidence 456777777 3 2232 334444455667899999998775542 334666677765 4333332221110 00
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCc
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 173 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~ 173 (494)
.+.-..+.|||||+.++.... ++ .++++|..+++.......... .+. ..-..
T Consensus 298 ~~~v~~~~~s~~g~~l~~g~~------------------dg---~i~vwd~~~~~~~~~~~~~~~----~h~---~~v~~ 349 (380)
T 3iz6_a 298 LPIVTSVAFSISGRLLFAGYS------------------NG---DCYVWDTLLAEMVLNLGTLQN----SHE---GRISC 349 (380)
T ss_dssp SCSCSEEEECSSSSEEEEECT------------------TS---CEEEEETTTCCEEEEECCSCS----SCC---CCCCE
T ss_pred cCceEEEEECCCCCEEEEEEC------------------CC---CEEEEECCCCceEEEEecccC----CCC---CceEE
Confidence 001113458999997765431 12 388889887764332211000 000 00122
Q ss_pred ccccccCcEEEEEEecCCCCCeEEEEEcCCC
Q 011049 174 EDINLNQLKILTSKESKTEITQYHILSWPLK 204 (494)
Q Consensus 174 ~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~ 204 (494)
..|+||+..++. . +. -..+.++++.+.
T Consensus 350 l~~s~dg~~l~s-g-s~--D~~i~iW~~~~~ 376 (380)
T 3iz6_a 350 LGLSSDGSALCT-G-SW--DKNLKIWAFSGH 376 (380)
T ss_dssp EEECSSSSEEEE-E-CT--TSCEEEEECCSS
T ss_pred EEECCCCCEEEE-e-eC--CCCEEEEecCCC
Confidence 478899886543 2 22 234555665543
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=96.32 E-value=0.061 Score=49.87 Aligned_cols=147 Identities=10% Similarity=-0.027 Sum_probs=76.5
Q ss_pred ccceeeeccCCCCCCCCCee-cccccc-----ccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccc
Q 011049 16 PRDIIYTQPAEPAEGEKPEI-LHKLDL-----RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFE 89 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~-lt~~~~-----~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~ 89 (494)
+.+.|+++|. ++++... +.-+.. .-...++ |++.|+.. .... ...|+++|+.++ +....... .
T Consensus 103 ~~~~v~~iD~---~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~-~~~~-~~~v~viD~~t~--~~~~~i~~--g 171 (328)
T 3dsm_A 103 WDYRIFIINP---KTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVN-CWSY-QNRILKIDTETD--KVVDELTI--G 171 (328)
T ss_dssp SCSEEEEEET---TTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEE-ECTT-CCEEEEEETTTT--EEEEEEEC--S
T ss_pred CCCeEEEEEC---CCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEE-cCCC-CCEEEEEECCCC--eEEEEEEc--C
Confidence 3567777777 5554432 222210 2234456 56665544 3211 458999999876 32222211 1
Q ss_pred cccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeC-cchhhhheeeec
Q 011049 90 NVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESN-REKYFETAVALV 168 (494)
Q Consensus 90 ~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~-~~~~~~~~~~~~ 168 (494)
. .|.... .+|||+ +++....... +.........|+++|.++++....+... +. ..
T Consensus 172 ~---~p~~i~--~~~dG~-l~v~~~~~~~----------~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~----~p---- 227 (328)
T 3dsm_A 172 I---QPTSLV--MDKYNK-MWTITDGGYE----------GSPYGYEAPSLYRIDAETFTVEKQFKFKLGD----WP---- 227 (328)
T ss_dssp S---CBCCCE--ECTTSE-EEEEBCCBCT----------TCSSCBCCCEEEEEETTTTEEEEEEECCTTC----CC----
T ss_pred C---CccceE--EcCCCC-EEEEECCCcc----------CCccccCCceEEEEECCCCeEEEEEecCCCC----Cc----
Confidence 1 123333 799997 5555421100 0000001235999999998766444322 11 01
Q ss_pred cCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCce
Q 011049 169 FGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKS 206 (494)
Q Consensus 169 s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~ 206 (494)
....++||++.+++... .+++++.++++.
T Consensus 228 ---~~la~~~d~~~lyv~~~------~v~~~d~~t~~~ 256 (328)
T 3dsm_A 228 ---SEVQLNGTRDTLYWINN------DIWRMPVEADRV 256 (328)
T ss_dssp ---EEEEECTTSCEEEEESS------SEEEEETTCSSC
T ss_pred ---eeEEEecCCCEEEEEcc------EEEEEECCCCce
Confidence 12378888887776432 789999877664
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.15 Score=48.52 Aligned_cols=123 Identities=8% Similarity=-0.041 Sum_probs=71.7
Q ss_pred ccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEE
Q 011049 44 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYI 123 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~ 123 (494)
.+.++.+++..|+++-. ....|+++++++. ..+.+...... .|.... ..|++.+|++....
T Consensus 162 ~glavd~~~g~lY~~d~---~~~~I~~~~~dg~--~~~~l~~~~l~----~P~gia--vdp~~g~ly~td~~-------- 222 (386)
T 3v65_B 162 GGLAVDWVHDKLYWTDS---GTSRIEVANLDGA--HRKVLLWQSLE----KPRAIA--LHPMEGTIYWTDWG-------- 222 (386)
T ss_dssp CCEEEETTTTEEEEEET---TTTEEEECBTTSC--SCEEEECSSCS----CEEEEE--EETTTTEEEEEECS--------
T ss_pred cEEEEEeCCCeEEEEcC---CCCeEEEEeCCCC--ceEEeecCCCC----CCcEEE--EEcCCCeEEEeccC--------
Confidence 45677777777776532 2458999999876 44444432211 122222 67888878776421
Q ss_pred EEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 124 LLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 124 ~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
....|+++++++...+.+...... .+ ....+++++++|+++... ...|+++++++
T Consensus 223 -----------~~~~I~r~~~dG~~~~~~~~~~~~----~P-------nGlavd~~~~~lY~aD~~---~~~I~~~d~dG 277 (386)
T 3v65_B 223 -----------NTPRIEASSMDGSGRRIIADTHLF----WP-------NGLTIDYAGRRMYWVDAK---HHVIERANLDG 277 (386)
T ss_dssp -----------SSCEEEEEETTSCSCEEEECSSCS----CE-------EEEEEEGGGTEEEEEETT---TTEEEEECTTS
T ss_pred -----------CCCEEEEEeCCCCCcEEEEECCCC----Ce-------eeEEEeCCCCEEEEEECC---CCEEEEEeCCC
Confidence 123588888887655554432110 01 123677778888776533 35789998877
Q ss_pred CceeEee
Q 011049 204 KKSSQIT 210 (494)
Q Consensus 204 ~~~~~lt 210 (494)
...+.+.
T Consensus 278 ~~~~~~~ 284 (386)
T 3v65_B 278 SHRKAVI 284 (386)
T ss_dssp CSCEEEE
T ss_pred CeeEEEE
Confidence 6555443
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.033 Score=54.26 Aligned_cols=63 Identities=17% Similarity=0.051 Sum_probs=36.7
Q ss_pred cccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC-CceeeCCCCCEEEEEE
Q 011049 43 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS-PMMTRTSTGTNVIAKI 113 (494)
Q Consensus 43 ~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~-~~~~~spDG~~i~~~~ 113 (494)
...++|||||+.|++++..++ .-.+|-+...++ +........... .. -.+.|+|||+.|+...
T Consensus 105 v~~~~~s~d~~~l~~~~~~dg-~v~iwd~~~~~~--~~~~~~~~~~~~-----~~v~~~~~sp~~~~l~~~~ 168 (450)
T 2vdu_B 105 IRNLRLTSDESRLIACADSDK-SLLVFDVDKTSK--NVLKLRKRFCFS-----KRPNAISIAEDDTTVIIAD 168 (450)
T ss_dssp EEEEEECTTSSEEEEEEGGGT-EEEEEEECSSSS--SCEEEEEEEECS-----SCEEEEEECTTSSEEEEEE
T ss_pred eEEEEEcCCCCEEEEEECCCC-eEEEEECcCCCC--ceeeeeecccCC-----CCceEEEEcCCCCEEEEEe
Confidence 456789999999877665444 445555543254 444433221111 11 1345999999888764
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=96.29 E-value=0.053 Score=50.13 Aligned_cols=52 Identities=8% Similarity=-0.070 Sum_probs=34.2
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 75 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~ 75 (494)
+.||.++. ++++.+.++........++|+|||+.|++.... ...|++++++.
T Consensus 162 ~~l~~~~~---~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~---~~~i~~~d~~~ 213 (333)
T 2dg1_A 162 GGVYYVSP---DFRTVTPIIQNISVANGIALSTDEKVLWVTETT---ANRLHRIALED 213 (333)
T ss_dssp EEEEEECT---TSCCEEEEEEEESSEEEEEECTTSSEEEEEEGG---GTEEEEEEECT
T ss_pred ceEEEEeC---CCCEEEEeecCCCcccceEECCCCCEEEEEeCC---CCeEEEEEecC
Confidence 46777766 556666655433334568899999988776422 35788888853
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=96.24 E-value=0.16 Score=48.35 Aligned_cols=124 Identities=14% Similarity=0.094 Sum_probs=64.7
Q ss_pred cccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCce-Eeeeccccc----cc---CCCC--CC--ceeeCCCCCE
Q 011049 41 LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPR-VLFDRVFEN----VY---SDPG--SP--MMTRTSTGTN 108 (494)
Q Consensus 41 ~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~-~lt~~~~~~----~~---~~~~--~~--~~~~spDG~~ 108 (494)
......+|||||+.|+..+. . ..++| ++..+ +.. .+....... .. ..+. .. .++|||||+.
T Consensus 65 ~~V~~v~fspdg~~la~g~~--~-~v~i~--~~~~g--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~ 137 (393)
T 1erj_A 65 SVVCCVKFSNDGEYLATGCN--K-TTQVY--RVSDG--SLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF 137 (393)
T ss_dssp SCCCEEEECTTSSEEEEECB--S-CEEEE--ETTTC--CEEEEECC-----------------CCCCBEEEEEECTTSSE
T ss_pred CEEEEEEECCCCCEEEEEcC--C-cEEEE--EecCC--CEEEEecCccccccccccccccccCCCceeEEEEEECCCCCE
Confidence 34456789999999887542 2 23444 44444 222 221111000 00 0000 01 2459999998
Q ss_pred EEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEe
Q 011049 109 VIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKE 188 (494)
Q Consensus 109 i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~ 188 (494)
++.... ++ .+.++|+++++.......... .. ....|+|++..++. .+
T Consensus 138 l~s~~~------------------d~---~i~iwd~~~~~~~~~~~~h~~----~v-------~~~~~~p~~~~l~s-~s 184 (393)
T 1erj_A 138 LATGAE------------------DR---LIRIWDIENRKIVMILQGHEQ----DI-------YSLDYFPSGDKLVS-GS 184 (393)
T ss_dssp EEEEET------------------TS---CEEEEETTTTEEEEEECCCSS----CE-------EEEEECTTSSEEEE-EE
T ss_pred EEEEcC------------------CC---eEEEEECCCCcEEEEEccCCC----CE-------EEEEEcCCCCEEEE-ec
Confidence 876541 11 388889988765544332211 01 12378888876653 32
Q ss_pred cCCCCCeEEEEEcCCCcee
Q 011049 189 SKTEITQYHILSWPLKKSS 207 (494)
Q Consensus 189 s~~~p~~l~~~~~~~~~~~ 207 (494)
. -..+.++++.+++..
T Consensus 185 ~---d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 185 G---DRTVRIWDLRTGQCS 200 (393)
T ss_dssp T---TSEEEEEETTTTEEE
T ss_pred C---CCcEEEEECCCCeeE
Confidence 2 256777888776543
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=96.24 E-value=0.14 Score=48.19 Aligned_cols=140 Identities=7% Similarity=-0.087 Sum_probs=76.5
Q ss_pred CccceeeeccCCCCCCCCCeeccc---cccccccceecC-CCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHK---LDLRFRSVSWCD-DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN 90 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~---~~~~~~~p~wsp-Dg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~ 90 (494)
+..+.|.++++ .+++...... ........+|+| |++.|+.. .. ...|.+.++.+. ..+.+.......
T Consensus 93 ~~dg~i~iwd~---~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~-~~---d~~i~iwd~~~~--~~~~~~~~~~~~ 163 (383)
T 3ei3_B 93 SKGGDIILWDY---DVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVS-SI---RGATTLRDFSGS--VIQVFAKTDSWD 163 (383)
T ss_dssp EBTSCEEEEET---TSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEE-ET---TTEEEEEETTSC--EEEEEECCCCSS
T ss_pred cCCCeEEEEeC---CCcccceeeecCCcCCceeEEEeCCCCCCEEEEE-eC---CCEEEEEECCCC--ceEEEeccCCCC
Confidence 34568889988 6555554432 344556789999 55655544 32 345777777754 434443322211
Q ss_pred ccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccC
Q 011049 91 VYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFG 170 (494)
Q Consensus 91 ~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~ 170 (494)
. .-..+.|+|||+.++.... ++ .+.++|+.+.....+....+. .
T Consensus 164 ~----~v~~~~~~~~~~~l~~~~~------------------d~---~i~i~d~~~~~~~~~~~h~~~-----v------ 207 (383)
T 3ei3_B 164 Y----WYCCVDVSVSRQMLATGDS------------------TG---RLLLLGLDGHEIFKEKLHKAK-----V------ 207 (383)
T ss_dssp C----CEEEEEEETTTTEEEEEET------------------TS---EEEEEETTSCEEEEEECSSSC-----E------
T ss_pred C----CeEEEEECCCCCEEEEECC------------------CC---CEEEEECCCCEEEEeccCCCc-----E------
Confidence 0 0112448999998776541 11 378888854333333222211 1
Q ss_pred CCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 171 QGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 171 ~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
....|+|++..++++... -..+.++++..
T Consensus 208 -~~~~~~~~~~~~l~s~~~---d~~i~iwd~~~ 236 (383)
T 3ei3_B 208 -THAEFNPRCDWLMATSSV---DATVKLWDLRN 236 (383)
T ss_dssp -EEEEECSSCTTEEEEEET---TSEEEEEEGGG
T ss_pred -EEEEECCCCCCEEEEEeC---CCEEEEEeCCC
Confidence 123788888745555443 24577777665
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.22 E-value=0.086 Score=46.84 Aligned_cols=150 Identities=13% Similarity=0.053 Sum_probs=72.4
Q ss_pred EEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCccc-CCCCccCCCC---chhHHHHHhCCeEEE
Q 011049 226 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVR-GSPNEFSGMT---PTSSLIFLARRFAVL 301 (494)
Q Consensus 226 ~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~l~~~G~~v~ 301 (494)
.+.+....|..+..|++.....++. ..|+|+|++|||.++.-..+.+. -+|-.+..-. ......|... ..++
T Consensus 28 yv~v~~~~~~~lFywf~es~~~~p~---~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~SW~~~-anll 103 (270)
T 1gxs_A 28 YVTIDDNNGRALYYWFQEADTADPA---AAPLVLWLNGGPGCSSIGLGAMQELGAFRVHTNGESLLLNEYAWNKA-ANIL 103 (270)
T ss_dssp EEEEETTTTEEEEEEEECCCSSCGG---GSCEEEEEECTTTBCTTTTHHHHTTSSEEECTTSSCEEECTTCGGGT-SEEE
T ss_pred EEEcCCCCCcEEEEEEEEecCCCCC---CCCEEEEecCCCcccchhhhhHHhccCceecCCCCcceeCccchhcc-ccEE
Confidence 4555545567888888865222232 27999999999854321100000 0111110000 0000011222 2344
Q ss_pred eCCCCCCCCCCCCCCCchh---HHHHHHHHHHHHH-HHHHcCCCCCCcEEEEecChHHHHHHHHH---HhC----CCcee
Q 011049 302 AGPSIPIIGEGDKLPNDRF---VEQLVSSAEAAVE-EVVRRGVADPSRIAVGGHSYGAFMTAHLL---AHA----PHLFC 370 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~~~~---~~~~~~d~~~~v~-~l~~~~~~d~~ri~i~G~S~GG~~a~~~~---~~~----p~~~~ 370 (494)
..+..-..|+........+ -...+.|+..+++ |+.+.+.....++.|+|.| |=++...+. .+. .=.++
T Consensus 104 fiDqPvGtGfSy~~~~~~~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~la~~i~~~n~~~~~inLk 182 (270)
T 1gxs_A 104 FAESPAGVGFSYSNTSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-GHFIPQLSQVVYRNRNNSPFINFQ 182 (270)
T ss_dssp EECCSTTSTTCEESSGGGGCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHHHHHHHHHTTTTCTTCEEE
T ss_pred EEeccccccccCCCCCccccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchHHHHHHHHhccccccceeee
Confidence 4343223344322111111 2344667766664 5544444556789999999 654443322 221 12468
Q ss_pred EEEeCCCCCC
Q 011049 371 CGIARSGSYN 380 (494)
Q Consensus 371 a~v~~~~~~~ 380 (494)
+++...|+++
T Consensus 183 Gi~ign~~~d 192 (270)
T 1gxs_A 183 GLLVSSGLTN 192 (270)
T ss_dssp EEEEESCCCB
T ss_pred eEEEeCCccC
Confidence 8888888765
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=96.17 E-value=0.066 Score=50.11 Aligned_cols=86 Identities=10% Similarity=0.069 Sum_probs=50.4
Q ss_pred CccceeeeccCCCCCCCC---CeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccc
Q 011049 15 SPRDIIYTQPAEPAEGEK---PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV 91 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~---~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~ 91 (494)
+..+.|+++++ ++++ ...+..........+|+|||+.|+..+. ...|.+.++.++ +............
T Consensus 27 ~~d~~v~i~~~---~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~----dg~i~vwd~~~~--~~~~~~~~~~~~~ 97 (372)
T 1k8k_C 27 PNNHEVHIYEK---SGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT----DRNAYVWTLKGR--TWKPTLVILRINR 97 (372)
T ss_dssp CSSSEEEEEEE---ETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEET----TSCEEEEEEETT--EEEEEEECCCCSS
T ss_pred eCCCEEEEEeC---CCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcC----CCeEEEEECCCC--eeeeeEEeecCCC
Confidence 45678999988 6563 3344445555667899999998886542 234555565554 3232222111110
Q ss_pred cCCCCCCceeeCCCCCEEEEEE
Q 011049 92 YSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 92 ~~~~~~~~~~~spDG~~i~~~~ 113 (494)
.-..+.|+|||+.++...
T Consensus 98 ----~v~~~~~~~~~~~l~~~~ 115 (372)
T 1k8k_C 98 ----AARCVRWAPNEKKFAVGS 115 (372)
T ss_dssp ----CEEEEEECTTSSEEEEEE
T ss_pred ----ceeEEEECCCCCEEEEEe
Confidence 111244899999887765
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=96.15 E-value=0.08 Score=48.22 Aligned_cols=129 Identities=10% Similarity=0.021 Sum_probs=66.9
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCC--CCCCCceEe-eecccccccCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPG--SKDVAPRVL-FDRVFENVYSD 94 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~--~g~~~~~~l-t~~~~~~~~~~ 94 (494)
+.||.++. + ++.+.+.........++|||||+.|++.... ...||+++++ +|....+++ .......
T Consensus 130 ~~l~~~d~---~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~~---~~~i~~~~~d~~~G~~~~~~~~~~~~~~~---- 198 (297)
T 3g4e_A 130 GALYSLFP---D-HHVKKYFDQVDISNGLDWSLDHKIFYYIDSL---SYSVDAFDYDLQTGQISNRRSVYKLEKEE---- 198 (297)
T ss_dssp EEEEEECT---T-SCEEEEEEEESBEEEEEECTTSCEEEEEEGG---GTEEEEEEECTTTCCEEEEEEEEECCGGG----
T ss_pred cEEEEEEC---C-CCEEEEeeccccccceEEcCCCCEEEEecCC---CCcEEEEeccCCCCcccCcEEEEECCCCC----
Confidence 45666665 3 4444443332333568999999988776432 4578888764 442111222 2211111
Q ss_pred CCCC-ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCc
Q 011049 95 PGSP-MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 173 (494)
Q Consensus 95 ~~~~-~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~ 173 (494)
+.| -++.++||. |++... .+. .|.++|+++|+.......... .. ..
T Consensus 199 -~~p~g~~~d~~G~-lwva~~------------------~~~--~v~~~d~~tG~~~~~i~~p~~----~~-------t~ 245 (297)
T 3g4e_A 199 -QIPDGMCIDAEGK-LWVACY------------------NGG--RVIRLDPVTGKRLQTVKLPVD----KT-------TS 245 (297)
T ss_dssp -CEEEEEEEBTTSC-EEEEEE------------------TTT--EEEEECTTTCCEEEEEECSSS----BE-------EE
T ss_pred -CCCCeeEECCCCC-EEEEEc------------------CCC--EEEEEcCCCceEEEEEECCCC----Cc-------eE
Confidence 112 123678884 444321 111 388899987775544332211 01 12
Q ss_pred cccc-ccCcEEEEEEecC
Q 011049 174 EDIN-LNQLKILTSKESK 190 (494)
Q Consensus 174 ~~~s-~d~~~~~~~~~s~ 190 (494)
..|+ ||+++++++....
T Consensus 246 ~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 246 CCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EEEESGGGCEEEEEEBCT
T ss_pred EEEeCCCCCEEEEEcCCc
Confidence 3566 7778888876643
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=96.14 E-value=0.019 Score=54.13 Aligned_cols=146 Identities=10% Similarity=0.016 Sum_probs=78.9
Q ss_pred CccceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
+..+.|.++|+ ..++... +..........+|+||++.++.+... ...|.+.++..+ +...........
T Consensus 158 s~dg~v~iwd~---~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~---dg~v~~wd~~~~--~~~~~~~~~~~~--- 226 (357)
T 4g56_B 158 GKDFSVKVWDL---SQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGE---DGRILLWDTRKP--KPATRIDFCASD--- 226 (357)
T ss_dssp ETTSCEEEEET---TTTEEEEEECCCSSCEEEEEECTTCSSCEEEEET---TSCEEECCTTSS--SCBCBCCCTTCC---
T ss_pred eCCCeEEEEEC---CCCcEEEEEcCCCCCEEEEEEccCCCceeeeecc---CCceEEEECCCC--ceeeeeeecccc---
Confidence 34557888887 5454433 33333445567899999765555433 335667777765 332222211111
Q ss_pred CCCCC-ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCC
Q 011049 94 DPGSP-MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQG 172 (494)
Q Consensus 94 ~~~~~-~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~ 172 (494)
..+ .+.|+||+..++..... +. .+.++|+.+++..+....... .. .
T Consensus 227 --~~v~~v~~sp~~~~~la~g~~-----------------d~---~i~~wd~~~~~~~~~~~~~~~----~v-------~ 273 (357)
T 4g56_B 227 --TIPTSVTWHPEKDDTFACGDE-----------------TG---NVSLVNIKNPDSAQTSAVHSQ----NI-------T 273 (357)
T ss_dssp --SCEEEEEECTTSTTEEEEEES-----------------SS---CEEEEESSCGGGCEEECCCSS----CE-------E
T ss_pred --ccccchhhhhcccceEEEeec-----------------cc---ceeEEECCCCcEeEEEeccce----eE-------E
Confidence 111 24489997655554321 11 278888887765443332211 01 1
Q ss_pred cccccccCcEEEEEEecCCCCCeEEEEEcCCCcee
Q 011049 173 EEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 207 (494)
Q Consensus 173 ~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~ 207 (494)
...|+|++..++++.+. -..+.+++.++++..
T Consensus 274 ~l~~sp~~~~~lasgs~---D~~i~iwd~~~~~~~ 305 (357)
T 4g56_B 274 GLAYSYHSSPFLASISE---DCTVAVLDADFSEVF 305 (357)
T ss_dssp EEEECSSSSCCEEEEET---TSCEEEECTTSCEEE
T ss_pred EEEEcCCCCCEEEEEeC---CCEEEEEECCCCcEe
Confidence 23788888776665543 245777787766543
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.12 E-value=0.25 Score=46.17 Aligned_cols=123 Identities=8% Similarity=-0.023 Sum_probs=70.7
Q ss_pred ccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEE
Q 011049 44 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYI 123 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~ 123 (494)
.+.++.++++.|+++-. ....|++++++|. ..+.+...... .|.. +...|++.+|+++...
T Consensus 119 ~glavd~~~g~ly~~d~---~~~~I~~~~~dG~--~~~~l~~~~l~----~P~~--iavdp~~g~ly~td~~-------- 179 (349)
T 3v64_C 119 GGLAVDWVHDKLYWTDS---GTSRIEVANLDGA--HRKVLLWQSLE----KPRA--IALHPMEGTIYWTDWG-------- 179 (349)
T ss_dssp CEEEEETTTTEEEEEET---TTTEEEEEETTSC--SCEEEECTTCS----CEEE--EEEETTTTEEEEEECS--------
T ss_pred cEEEEecCCCeEEEEcC---CCCeEEEEcCCCC--ceEEEEeCCCC----Ccce--EEEecCcCeEEEeccC--------
Confidence 45677777777777532 2458999999876 44444432211 1222 2268877778776421
Q ss_pred EEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 124 LLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 124 ~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
....|+++++++...+.+...... .+ ....+++++++++++... ...|++++.++
T Consensus 180 -----------~~~~I~r~~~dG~~~~~~~~~~~~----~P-------nGla~d~~~~~lY~aD~~---~~~I~~~~~dG 234 (349)
T 3v64_C 180 -----------NTPRIEASSMDGSGRRIIADTHLF----WP-------NGLTIDYAGRRMYWVDAK---HHVIERANLDG 234 (349)
T ss_dssp -----------SSCEEEEEETTSCSCEESCCSSCS----CE-------EEEEEETTTTEEEEEETT---TTEEEEEETTS
T ss_pred -----------CCCEEEEEeCCCCCcEEEEECCCC----Cc-------ceEEEeCCCCEEEEEECC---CCEEEEEeCCC
Confidence 123588888887554443221100 01 123677778888776543 35789999887
Q ss_pred CceeEee
Q 011049 204 KKSSQIT 210 (494)
Q Consensus 204 ~~~~~lt 210 (494)
...+.+.
T Consensus 235 ~~~~~~~ 241 (349)
T 3v64_C 235 SHRKAVI 241 (349)
T ss_dssp CSCEEEE
T ss_pred CceEEEE
Confidence 6555443
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=96.12 E-value=0.1 Score=54.98 Aligned_cols=121 Identities=10% Similarity=0.131 Sum_probs=70.7
Q ss_pred eeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCC--ceeeCCCCCEEEE
Q 011049 34 EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP--MMTRTSTGTNVIA 111 (494)
Q Consensus 34 ~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~--~~~~spDG~~i~~ 111 (494)
+.++.........+|||||+.|+..+. ...|.+.++.++ +...... .. ..+ .+.|||||++|+.
T Consensus 7 ~~~~~h~~~v~~i~~sp~~~~la~~~~----~g~v~iwd~~~~--~~~~~~~--~~------~~~v~~~~~s~~~~~l~~ 72 (814)
T 3mkq_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLY----SGRVEIWNYETQ--VEVRSIQ--VT------ETPVRAGKFIARKNWIIV 72 (814)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEET----TSEEEEEETTTT--EEEEEEE--CC------SSCEEEEEEEGGGTEEEE
T ss_pred eeeecCCCceEEEEECCCCCEEEEEeC----CCEEEEEECCCC--ceEEEEe--cC------CCcEEEEEEeCCCCEEEE
Confidence 445555566778899999999887642 446777787765 3322222 11 112 2349999998887
Q ss_pred EEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCC
Q 011049 112 KIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKT 191 (494)
Q Consensus 112 ~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~ 191 (494)
... ++ .+.++|+.+++.......... .. ....|+|++..++....
T Consensus 73 ~~~------------------dg---~i~vw~~~~~~~~~~~~~~~~----~v-------~~~~~s~~~~~l~~~~~--- 117 (814)
T 3mkq_A 73 GSD------------------DF---RIRVFNYNTGEKVVDFEAHPD----YI-------RSIAVHPTKPYVLSGSD--- 117 (814)
T ss_dssp EET------------------TS---EEEEEETTTCCEEEEEECCSS----CE-------EEEEECSSSSEEEEEET---
T ss_pred EeC------------------CC---eEEEEECCCCcEEEEEecCCC----CE-------EEEEEeCCCCEEEEEcC---
Confidence 652 11 388888888765443332111 01 12367888876654322
Q ss_pred CCCeEEEEEcCCC
Q 011049 192 EITQYHILSWPLK 204 (494)
Q Consensus 192 ~p~~l~~~~~~~~ 204 (494)
-..+.++++.++
T Consensus 118 -dg~i~vw~~~~~ 129 (814)
T 3mkq_A 118 -DLTVKLWNWENN 129 (814)
T ss_dssp -TSEEEEEEGGGT
T ss_pred -CCEEEEEECCCC
Confidence 245666666554
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.12 E-value=0.064 Score=53.26 Aligned_cols=63 Identities=3% Similarity=-0.208 Sum_probs=34.2
Q ss_pred ccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC-CCCCCceeeCCCCCEEEEEE
Q 011049 40 DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS-DPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 40 ~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~-~~~~~~~~~spDG~~i~~~~ 113 (494)
.......+|||||+.|+-.+.. ..+.+.+.++ ++.... ..... .-.--.++|||||+.|+...
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~d----g~V~iwd~~~------~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs 148 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNN----GNVSVFKDNK------MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGN 148 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETT----SCEEEEETTE------EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEE
T ss_pred CCcEEEEEECCCCCEEEEEeCC----CcEEEEeCCc------eeeecc-CCCccccccEEEEEEcCCCCEEEEEc
Confidence 4455678899999999976532 2344444321 222211 11000 00011345999999888765
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.11 E-value=0.13 Score=48.97 Aligned_cols=138 Identities=11% Similarity=0.064 Sum_probs=78.6
Q ss_pred CccceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
+..+.|+++++ ..+++.. +..........+|+|||+.|+..+ ....|.+.++..+ +..........
T Consensus 224 ~~~g~i~~~d~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----~d~~i~i~d~~~~--~~~~~~~~~~~---- 290 (425)
T 1r5m_A 224 GPKGAIFVYQI---TEKTPTGKLIGHHGPISVLEFNDTNKLLLSAS----DDGTLRIWHGGNG--NSQNCFYGHSQ---- 290 (425)
T ss_dssp CGGGCEEEEET---TCSSCSEEECCCSSCEEEEEEETTTTEEEEEE----TTSCEEEECSSSB--SCSEEECCCSS----
T ss_pred cCCCeEEEEEc---CCCceeeeeccCCCceEEEEECCCCCEEEEEc----CCCEEEEEECCCC--ccceEecCCCc----
Confidence 34568889988 5555443 333444556789999999877654 2446888888765 33333321111
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCc
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 173 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~ 173 (494)
.-..+.|+||| .++.... ++ .+.++|+.+++.......... .. ..
T Consensus 291 --~i~~~~~~~~~-~l~~~~~------------------d~---~i~i~d~~~~~~~~~~~~~~~----~i-------~~ 335 (425)
T 1r5m_A 291 --SIVSASWVGDD-KVISCSM------------------DG---SVRLWSLKQNTLLALSIVDGV----PI-------FA 335 (425)
T ss_dssp --CEEEEEEETTT-EEEEEET------------------TS---EEEEEETTTTEEEEEEECTTC----CE-------EE
T ss_pred --cEEEEEECCCC-EEEEEeC------------------CC---cEEEEECCCCcEeEecccCCc----cE-------EE
Confidence 01123489999 4444331 11 388889888765444432211 01 12
Q ss_pred ccccccCcEEEEEEecCCCCCeEEEEEcCCC
Q 011049 174 EDINLNQLKILTSKESKTEITQYHILSWPLK 204 (494)
Q Consensus 174 ~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~ 204 (494)
..|+|++..++.... -..+.++++.++
T Consensus 336 ~~~s~~~~~l~~~~~----dg~i~i~~~~~~ 362 (425)
T 1r5m_A 336 GRISQDGQKYAVAFM----DGQVNVYDLKKL 362 (425)
T ss_dssp EEECTTSSEEEEEET----TSCEEEEECHHH
T ss_pred EEEcCCCCEEEEEEC----CCeEEEEECCCC
Confidence 378888876665432 245777776543
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.10 E-value=0.086 Score=49.19 Aligned_cols=84 Identities=13% Similarity=0.108 Sum_probs=45.4
Q ss_pred CccceeeeccCCCCCCCCCe---ec-cccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc
Q 011049 15 SPRDIIYTQPAEPAEGEKPE---IL-HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN 90 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~---~l-t~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~ 90 (494)
+..+.|.++++ +++... .+ ..........+|||||+.|+..+. ++ .-.+|-+. .+ +.+.+....+.
T Consensus 35 ~~D~~i~iw~~---~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~-D~-~v~iw~~~--~~--~~~~~~~~~~h- 104 (345)
T 3fm0_A 35 GGDRRIRIWGT---EGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF-DA-TTCIWKKN--QD--DFECVTTLEGH- 104 (345)
T ss_dssp ETTSCEEEEEE---ETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET-TS-CEEEEEEC--CC---EEEEEEECCC-
T ss_pred cCCCeEEEEEc---CCCcceeeeeeccccCCcEEEEEECCCCCEEEEEEC-CC-cEEEEEcc--CC--CeEEEEEccCC-
Confidence 34457777777 544321 11 122334557889999998876543 22 34566553 33 32333332222
Q ss_pred ccCCCCCC--ceeeCCCCCEEEEEE
Q 011049 91 VYSDPGSP--MMTRTSTGTNVIAKI 113 (494)
Q Consensus 91 ~~~~~~~~--~~~~spDG~~i~~~~ 113 (494)
..+ .+.|+|||+.|+..+
T Consensus 105 -----~~~v~~v~~sp~~~~l~s~s 124 (345)
T 3fm0_A 105 -----ENEVKSVAWAPSGNLLATCS 124 (345)
T ss_dssp -----SSCEEEEEECTTSSEEEEEE
T ss_pred -----CCCceEEEEeCCCCEEEEEE
Confidence 122 244999999887654
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.05 E-value=0.021 Score=52.80 Aligned_cols=35 Identities=23% Similarity=0.234 Sum_probs=26.3
Q ss_pred CcEEEEecChHHHHHHHHHHhCC---Cc---eeEEEeCCCC
Q 011049 344 SRIAVGGHSYGAFMTAHLLAHAP---HL---FCCGIARSGS 378 (494)
Q Consensus 344 ~ri~i~G~S~GG~~a~~~~~~~p---~~---~~a~v~~~~~ 378 (494)
.++.++|||+||.++..++.+.+ +. ++.++.+++.
T Consensus 105 ~~~~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~ 145 (316)
T 2px6_A 105 GPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGS 145 (316)
T ss_dssp CCCEEEEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCS
T ss_pred CCEEEEEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCC
Confidence 57999999999999999987653 34 6777765543
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.062 Score=51.89 Aligned_cols=53 Identities=6% Similarity=0.044 Sum_probs=33.1
Q ss_pred CccceeeeccCCCCCCCCC-----eecccccc------------ccccceecCCCceEEEEeeeeccceEEEEEcCCC
Q 011049 15 SPRDIIYTQPAEPAEGEKP-----EILHKLDL------------RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 75 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~-----~~lt~~~~------------~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~ 75 (494)
+..+.|.++|+ ..++. ..+..... .....+|+|||+.|+..+. ..|.+.++..
T Consensus 246 ~~dg~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-----~~v~iwd~~~ 315 (447)
T 3dw8_B 246 SSKGTIRLCDM---RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-----LSVKVWDLNM 315 (447)
T ss_dssp ETTSCEEEEET---TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-----SEEEEEETTC
T ss_pred eCCCeEEEEEC---cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-----CeEEEEeCCC
Confidence 44567888888 54443 33333322 4567899999998886542 4566667664
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=96.00 E-value=0.08 Score=48.75 Aligned_cols=82 Identities=6% Similarity=-0.027 Sum_probs=47.4
Q ss_pred ccceeeeccCCCCCCCCCe-eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 16 PRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~-~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
..+.|.++|+ ...+.. .+..........+|||||+.|+-.+. ...|.+-++..+ +. +......+
T Consensus 174 ~d~~i~~wd~---~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~----dg~i~iwd~~~~--~~--~~~~~~~~---- 238 (319)
T 3frx_A 174 NDKMVKAWNL---NQFQIEADFIGHNSNINTLTASPDGTLIASAGK----DGEIMLWNLAAK--KA--MYTLSAQD---- 238 (319)
T ss_dssp TTSCEEEEET---TTTEEEEEECCCCSCEEEEEECTTSSEEEEEET----TCEEEEEETTTT--EE--EEEEECCS----
T ss_pred CCCEEEEEEC---CcchhheeecCCCCcEEEEEEcCCCCEEEEEeC----CCeEEEEECCCC--cE--EEEecCCC----
Confidence 3456777777 433332 23333444567889999998776542 346777777765 32 22222111
Q ss_pred CCCCceeeCCCCCEEEEEE
Q 011049 95 PGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~ 113 (494)
.-..+.|||||..++...
T Consensus 239 -~v~~~~~sp~~~~la~~~ 256 (319)
T 3frx_A 239 -EVFSLAFSPNRYWLAAAT 256 (319)
T ss_dssp -CEEEEEECSSSSEEEEEE
T ss_pred -cEEEEEEcCCCCEEEEEc
Confidence 111245999999887654
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=96.00 E-value=0.055 Score=55.11 Aligned_cols=59 Identities=8% Similarity=0.024 Sum_probs=35.9
Q ss_pred ccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEE
Q 011049 42 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 42 ~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
.....+|||||+.|++.+ ...+++.++..+. ..+.+...... --.+.+||||++|+-..
T Consensus 20 ~~~~~~~spdg~~l~~~~-----~~~v~l~~~~~~~-~~~~~~~h~~~-------v~~~~~spdg~~lasg~ 78 (611)
T 1nr0_A 20 TAVVLGNTPAGDKIQYCN-----GTSVYTVPVGSLT-DTEIYTEHSHQ-------TTVAKTSPSGYYCASGD 78 (611)
T ss_dssp CCCCCEECTTSSEEEEEE-----TTEEEEEETTCSS-CCEEECCCSSC-------EEEEEECTTSSEEEEEE
T ss_pred ceeEEeeCCCCCEEEeCC-----CCEEEEecCCCcc-cCeEecCCCCc-------eEEEEECCCCcEEEEEe
Confidence 344678999999999865 2356677776541 22333222211 11244899999887664
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=95.99 E-value=0.074 Score=49.88 Aligned_cols=126 Identities=9% Similarity=0.066 Sum_probs=68.9
Q ss_pred CccceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
+..+.|.++|+ ..++... +..........+|+|||+.|+-.+. ...+.+.++..+ ....+........
T Consensus 217 s~Dg~v~~wd~---~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~----D~~v~lwd~~~~--~~~~~~~~~~~~~-- 285 (354)
T 2pbi_B 217 GCDKKAMVWDM---RSGQCVQAFETHESDVNSVRYYPSGDAFASGSD----DATCRLYDLRAD--REVAIYSKESIIF-- 285 (354)
T ss_dssp ETTSCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTT--EEEEEECCTTCCS--
T ss_pred eCCCeEEEEEC---CCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeC----CCeEEEEECCCC--cEEEEEcCCCccc--
Confidence 34567888888 5555443 3333445567889999998775542 234666666654 2222222111100
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCc
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 173 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~ 173 (494)
....+.|||||+.++.... ++ .+.++|+.+++.......... .. ..
T Consensus 286 --~~~~~~~s~~g~~l~~g~~------------------d~---~i~vwd~~~~~~~~~l~~h~~----~v-------~~ 331 (354)
T 2pbi_B 286 --GASSVDFSLSGRLLFAGYN------------------DY---TINVWDVLKGSRVSILFGHEN----RV-------ST 331 (354)
T ss_dssp --CEEEEEECTTSSEEEEEET------------------TS---CEEEEETTTCSEEEEECCCSS----CE-------EE
T ss_pred --ceeEEEEeCCCCEEEEEEC------------------CC---cEEEEECCCCceEEEEECCCC----cE-------EE
Confidence 1113448999997766541 11 288889877764333221110 01 12
Q ss_pred ccccccCcEEEE
Q 011049 174 EDINLNQLKILT 185 (494)
Q Consensus 174 ~~~s~d~~~~~~ 185 (494)
..|+||+..++.
T Consensus 332 l~~spdg~~l~s 343 (354)
T 2pbi_B 332 LRVSPDGTAFCS 343 (354)
T ss_dssp EEECTTSSCEEE
T ss_pred EEECCCCCEEEE
Confidence 378888876553
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=95.95 E-value=0.19 Score=51.01 Aligned_cols=141 Identities=6% Similarity=-0.021 Sum_probs=72.9
Q ss_pred ccceeeeccCCCCCCCCCe---eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccccc
Q 011049 16 PRDIIYTQPAEPAEGEKPE---ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~---~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~ 92 (494)
..+.|.++|+ ..++.. .+..........+|||||+.|+..+..+.....+++.+... ....+...
T Consensus 79 ~d~~v~lWd~---~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~---~~~~l~gh------ 146 (611)
T 1nr0_A 79 VHGNVRIWDT---TQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT---SNGNLTGQ------ 146 (611)
T ss_dssp TTSEEEEEES---SSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCC---BCBCCCCC------
T ss_pred CCCCEEEeEC---CCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCC---CcceecCC------
Confidence 3456778887 433322 22333344567889999999887654322235677776421 11112111
Q ss_pred CCCCCC--ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccC
Q 011049 93 SDPGSP--MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFG 170 (494)
Q Consensus 93 ~~~~~~--~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~ 170 (494)
..+ .+.|+||+..++..... +. .+.++|..+++.......... ..
T Consensus 147 ---~~~v~~v~f~p~~~~~l~s~s~-----------------D~---~v~lwd~~~~~~~~~l~~H~~----~V------ 193 (611)
T 1nr0_A 147 ---ARAMNSVDFKPSRPFRIISGSD-----------------DN---TVAIFEGPPFKFKSTFGEHTK----FV------ 193 (611)
T ss_dssp ---SSCEEEEEECSSSSCEEEEEET-----------------TS---CEEEEETTTBEEEEEECCCSS----CE------
T ss_pred ---CCCceEEEECCCCCeEEEEEeC-----------------CC---eEEEEECCCCeEeeeeccccC----ce------
Confidence 112 23489999854444321 11 267777776544332221110 01
Q ss_pred CCcccccccCcEEEEEEecCCCCCeEEEEEcCCCce
Q 011049 171 QGEEDINLNQLKILTSKESKTEITQYHILSWPLKKS 206 (494)
Q Consensus 171 ~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~ 206 (494)
....|+||+..++. .+. -..+.+++..+++.
T Consensus 194 -~~v~fspdg~~las-~s~---D~~i~lwd~~~g~~ 224 (611)
T 1nr0_A 194 -HSVRYNPDGSLFAS-TGG---DGTIVLYNGVDGTK 224 (611)
T ss_dssp -EEEEECTTSSEEEE-EET---TSCEEEEETTTCCE
T ss_pred -EEEEECCCCCEEEE-EEC---CCcEEEEECCCCcE
Confidence 12478899876553 322 24577777666543
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=95.94 E-value=0.12 Score=48.55 Aligned_cols=85 Identities=7% Similarity=0.079 Sum_probs=46.2
Q ss_pred CCccceeeeccCCCCCCCC---CeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCC-ceEeeecccc
Q 011049 14 VSPRDIIYTQPAEPAEGEK---PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVA-PRVLFDRVFE 89 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~---~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~-~~~lt~~~~~ 89 (494)
-+..+.|.++++ .++. ...+..........+|+|||+.|+..+. ...|.+.++.++ + .+.+......
T Consensus 29 ~~~d~~i~iw~~---~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~----d~~v~vwd~~~~--~~~~~~~~~~~~ 99 (377)
T 3dwl_C 29 TTATNQVELYEQ---DGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQ----DRNAYVYEKRPD--GTWKQTLVLLRL 99 (377)
T ss_dssp CCSSSCBCEEEE---ETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEET----TSSEEEC--------CCCCEEECCCC
T ss_pred ecCCCEEEEEEc---cCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeC----CCeEEEEEcCCC--CceeeeeEeccc
Confidence 345678888888 5442 2234444455667899999998886642 334666676655 3 1111111111
Q ss_pred cccCCCCCC--ceeeCCCCCEEEEEE
Q 011049 90 NVYSDPGSP--MMTRTSTGTNVIAKI 113 (494)
Q Consensus 90 ~~~~~~~~~--~~~~spDG~~i~~~~ 113 (494)
..+ .+.|+|||+.++...
T Consensus 100 ------~~~v~~~~~~~~~~~l~~~~ 119 (377)
T 3dwl_C 100 ------NRAATFVRWSPNEDKFAVGS 119 (377)
T ss_dssp ------SSCEEEEECCTTSSCCEEEE
T ss_pred ------CCceEEEEECCCCCEEEEEe
Confidence 112 244899999887765
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=95.90 E-value=0.44 Score=42.32 Aligned_cols=147 Identities=5% Similarity=0.002 Sum_probs=81.4
Q ss_pred cceeeeccCCCCCCCCCee-----ccc-cccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc
Q 011049 17 RDIIYTQPAEPAEGEKPEI-----LHK-LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN 90 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~-----lt~-~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~ 90 (494)
++.|+.+++ ++...+. +.. .......++|+|+++.|+++.. ....|++++++++ ..+.+.....
T Consensus 9 ~~~I~~~~~---~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~---~~~~I~~~~~~g~--~~~~~~~~~~-- 78 (267)
T 1npe_A 9 TGKIERLPL---ERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDI---SEPSIGRASLHGG--EPTTIIRQDL-- 78 (267)
T ss_dssp EEEEEEEEE---SSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEET---TTTEEEEEESSSC--CCEEEECTTC--
T ss_pred CCeEEEEEe---cCcccccccceeeecCCCCcEEEEEEecCCCEEEEEEC---CCCEEEEEecCCC--CcEEEEECCC--
Confidence 457888888 6554332 111 1123357889999888877632 2468999999876 4444432110
Q ss_pred ccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccC
Q 011049 91 VYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFG 170 (494)
Q Consensus 91 ~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~ 170 (494)
..|.. +.++|++.+|++.... ...|.++++++...+.+...... .+
T Consensus 79 --~~p~~--ia~d~~~~~lyv~d~~--------------------~~~I~~~~~~g~~~~~~~~~~~~----~P------ 124 (267)
T 1npe_A 79 --GSPEG--IALDHLGRTIFWTDSQ--------------------LDRIEVAKMDGTQRRVLFDTGLV----NP------ 124 (267)
T ss_dssp --CCEEE--EEEETTTTEEEEEETT--------------------TTEEEEEETTSCSCEEEECSSCS----SE------
T ss_pred --CCccE--EEEEecCCeEEEEECC--------------------CCEEEEEEcCCCCEEEEEECCCC----Cc------
Confidence 11222 2268888777766421 12477777776544433321100 01
Q ss_pred CCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEe
Q 011049 171 QGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQI 209 (494)
Q Consensus 171 ~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~l 209 (494)
....++++++.++++... .....|++++.++...+.+
T Consensus 125 -~~i~vd~~~g~lyv~~~~-~~~~~I~~~~~dg~~~~~~ 161 (267)
T 1npe_A 125 -RGIVTDPVRGNLYWTDWN-RDNPKIETSHMDGTNRRIL 161 (267)
T ss_dssp -EEEEEETTTTEEEEEECC-SSSCEEEEEETTSCCCEEE
T ss_pred -cEEEEeeCCCEEEEEECC-CCCcEEEEEecCCCCcEEE
Confidence 122567777777765532 1235788888776554444
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=95.88 E-value=0.039 Score=52.09 Aligned_cols=87 Identities=3% Similarity=-0.215 Sum_probs=49.0
Q ss_pred eeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeee------eccceEEEEEcCCCCCCCceEeeeccccccc
Q 011049 19 IIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY------KTSQTRTWLVCPGSKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~------~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~ 92 (494)
.|+++|. +.++...-......- .+.+||||+.++..... +.+.+.|.++|+.++ +...-..-.+...+
T Consensus 47 ~vsvID~---~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~--~vv~~I~v~~~~~~ 120 (368)
T 1mda_H 47 ENWVSCA---GCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF--LPIADIELPDAPRF 120 (368)
T ss_dssp EEEEEET---TTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC--CEEEEEEETTSCSC
T ss_pred eEEEEEC---CCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC--CEEEEEECCCcccc
Confidence 5667776 545443322222222 78999999998776532 113578999999987 33222111100000
Q ss_pred ---CCCCCCceeeCCCCCEEEEEE
Q 011049 93 ---SDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 93 ---~~~~~~~~~~spDG~~i~~~~ 113 (494)
..|.... +||||++++...
T Consensus 121 ~~g~~P~~ia--~SpDGk~lyVan 142 (368)
T 1mda_H 121 SVGPRVHIIG--NCASSACLLFFL 142 (368)
T ss_dssp CBSCCTTSEE--ECTTSSCEEEEE
T ss_pred ccCCCcceEE--EcCCCCEEEEEc
Confidence 1233333 899999887764
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=95.87 E-value=0.19 Score=50.23 Aligned_cols=152 Identities=8% Similarity=0.017 Sum_probs=80.4
Q ss_pred ceeeeccCCCCCCCCCe-eccccccccccceecC----CCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccccc
Q 011049 18 DIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCD----DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~-~lt~~~~~~~~p~wsp----Dg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~ 92 (494)
+.|.++|+.+ .+++.. .+..+ ..-...+||| ||+.|+..... ...|.++|..++ ++.......+....
T Consensus 200 ~~V~v~D~~~-~t~~~~~~i~~g-~~p~~va~sp~~~~dg~~l~v~~~~---~~~v~v~D~~t~--~~~~~i~~~g~~~~ 272 (543)
T 1nir_A 200 ARIDMIDLWA-KEPTKVAEIKIG-IEARSVESSKFKGYEDRYTIAGAYW---PPQFAIMDGETL--EPKQIVSTRGMTVD 272 (543)
T ss_dssp SEEEEEETTS-SSCEEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEE---SSEEEEEETTTC--CEEEEEECCEECSS
T ss_pred CeEEEEECcC-CCCcEEEEEecC-CCcceEEeCCCcCCCCCEEEEEEcc---CCeEEEEecccc--ccceeecccCcccC
Confidence 5677777611 122222 22222 2234678999 99987665432 346888888766 55444332211000
Q ss_pred --C-CCC-CC-ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeee
Q 011049 93 --S-DPG-SP-MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVAL 167 (494)
Q Consensus 93 --~-~~~-~~-~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~ 167 (494)
. .+. .+ .+.+||||.++++.... . ..|.++|..+++...++.....
T Consensus 273 ~~~~~~~~~v~~i~~s~~~~~~~vs~~~------------------~--g~i~vvd~~~~~~l~~~~i~~~--------- 323 (543)
T 1nir_A 273 TQTYHPEPRVAAIIASHEHPEFIVNVKE------------------T--GKVLLVNYKDIDNLTVTSIGAA--------- 323 (543)
T ss_dssp SCCEESCCCEEEEEECSSSSEEEEEETT------------------T--TEEEEEECTTSSSCEEEEEECC---------
T ss_pred ccccccCCceEEEEECCCCCEEEEEECC------------------C--CeEEEEEecCCCcceeEEeccC---------
Confidence 0 011 11 23479999877766421 1 1488888876543222211110
Q ss_pred ccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEe
Q 011049 168 VFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQI 209 (494)
Q Consensus 168 ~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~l 209 (494)
..-....|+|||++++..... ...+.++|.++++....
T Consensus 324 -~~~~~~~~spdg~~l~va~~~---~~~v~v~D~~tg~l~~~ 361 (543)
T 1nir_A 324 -PFLHDGGWDSSHRYFMTAANN---SNKVAVIDSKDRRLSAL 361 (543)
T ss_dssp -SSCCCEEECTTSCEEEEEEGG---GTEEEEEETTTTEEEEE
T ss_pred -cCccCceECCCCCEEEEEecC---CCeEEEEECCCCeEEEe
Confidence 000124789999877665432 24688899888765543
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=95.73 E-value=0.13 Score=47.86 Aligned_cols=102 Identities=6% Similarity=-0.008 Sum_probs=57.9
Q ss_pred ccceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
..+.|.++|+ ..++... +..........+|+|||+.|+-.+. ...|.+.++..+ .............
T Consensus 204 ~d~~v~~wd~---~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~----d~~v~iwd~~~~--~~~~~~~~~~~~~--- 271 (340)
T 1got_B 204 CDASAKLWDV---REGMCRQTFTGHESDINAICFFPNGNAFATGSD----DATCRLFDLRAD--QELMTYSHDNIIC--- 271 (340)
T ss_dssp TTSCEEEEET---TTCSEEEEECCCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTT--EEEEEECCTTCCS---
T ss_pred CCCcEEEEEC---CCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcC----CCcEEEEECCCC--cEEEEEccCCccc---
Confidence 3567888887 5454433 4434445567889999998776542 335666677654 3222221111100
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEE
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKER 151 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~ 151 (494)
.-..+.|+|||+.++.... ++ .+.++|+.+++...
T Consensus 272 -~v~~~~~s~~g~~l~~g~~------------------d~---~i~vwd~~~~~~~~ 306 (340)
T 1got_B 272 -GITSVSFSKSGRLLLAGYD------------------DF---NCNVWDALKADRAG 306 (340)
T ss_dssp -CEEEEEECTTSSEEEEEET------------------TS---EEEEEETTTCCEEE
T ss_pred -ceEEEEECCCCCEEEEECC------------------CC---eEEEEEcccCcEee
Confidence 0112458999998776541 11 37888887766543
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=95.72 E-value=0.075 Score=50.35 Aligned_cols=133 Identities=7% Similarity=-0.004 Sum_probs=68.1
Q ss_pred ccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeec---ccc-cccCCCCCCceeeCCCCCEEEEEEec
Q 011049 40 DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR---VFE-NVYSDPGSPMMTRTSTGTNVIAKIKK 115 (494)
Q Consensus 40 ~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~---~~~-~~~~~~~~~~~~~spDG~~i~~~~~~ 115 (494)
.......+|+||| .|+..+ ....|.+.++..+ +....... ... .. .-..+.|+|||+.++.....
T Consensus 186 ~~~i~~~~~~~~~-~l~~~~----~dg~i~i~d~~~~--~~~~~~~~~~~h~~~~~----~i~~i~~~~~~~~l~~~~~d 254 (397)
T 1sq9_A 186 SQFATSVDISERG-LIATGF----NNGTVQISELSTL--RPLYNFESQHSMINNSN----SIRSVKFSPQGSLLAIAHDS 254 (397)
T ss_dssp CCCCCEEEECTTS-EEEEEC----TTSEEEEEETTTT--EEEEEEECCC---CCCC----CEEEEEECSSTTEEEEEEEE
T ss_pred CCCceEEEECCCc-eEEEEe----CCCcEEEEECCCC--ceeEEEeccccccccCC----ccceEEECCCCCEEEEEecC
Confidence 3445678899999 555433 2456888888765 33333322 100 10 11124599999988766421
Q ss_pred cCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheee---eccCCCcccccccCcEEEEEEecCCC
Q 011049 116 ENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVA---LVFGQGEEDINLNQLKILTSKESKTE 192 (494)
Q Consensus 116 ~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~---~~s~~~~~~~s~d~~~~~~~~~s~~~ 192 (494)
+....|.++|+.+++............. .... .-..-....|+|++..++... .
T Consensus 255 ------------------~~~g~i~i~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~ 311 (397)
T 1sq9_A 255 ------------------NSFGCITLYETEFGERIGSLSVPTHSSQ-ASLGEFAHSSWVMSLSFNDSGETLCSAG----W 311 (397)
T ss_dssp ------------------TTEEEEEEEETTTCCEEEEECBC---------CCBSBSSCEEEEEECSSSSEEEEEE----T
T ss_pred ------------------CCCceEEEEECCCCcccceeccCccccc-ccccccccCCcEEEEEECCCCCEEEEEe----C
Confidence 0001378888887765444432100000 0000 000001247888887665433 2
Q ss_pred CCeEEEEEcCCCce
Q 011049 193 ITQYHILSWPLKKS 206 (494)
Q Consensus 193 p~~l~~~~~~~~~~ 206 (494)
-..+.++++.+++.
T Consensus 312 dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 312 DGKLRFWDVKTKER 325 (397)
T ss_dssp TSEEEEEETTTTEE
T ss_pred CCeEEEEEcCCCce
Confidence 35688888876644
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=95.72 E-value=0.085 Score=51.02 Aligned_cols=140 Identities=9% Similarity=-0.045 Sum_probs=72.9
Q ss_pred ccceeeeccCCCCCCCCCeec---cccccccccceecC-CCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccc
Q 011049 16 PRDIIYTQPAEPAEGEKPEIL---HKLDLRFRSVSWCD-DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV 91 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~l---t~~~~~~~~p~wsp-Dg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~ 91 (494)
..|.|.++|+ ..++...+ ..........+|+| ||+.|+- +..++ .|.+.++.++ ..+.+........
T Consensus 140 ~dg~i~lWd~---~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s-~s~D~---~v~iwd~~~~--~~~~~~~~~~~~~ 210 (435)
T 4e54_B 140 KGGDIMLWNF---GIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYA-SSMEG---TTRLQDFKGN--ILRVFASSDTINI 210 (435)
T ss_dssp TTSCEEEECS---SCCSCCEEECCCSSSCCCCEEEECSSCTTEEEE-ECSSS---CEEEEETTSC--EEEEEECCSSCSC
T ss_pred CCCEEEEEEC---CCCCceeEEEccCCCCCEEEEEEeCCCCCEEEE-EeCCC---EEEEeeccCC--ceeEEeccCCCCc
Confidence 4578999998 54443332 22344566789999 6776554 33333 3555566654 4344333322211
Q ss_pred cCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCC
Q 011049 92 YSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQ 171 (494)
Q Consensus 92 ~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~ 171 (494)
.-..+.|+|||+.|+.... ++ .+.++|+++.....+...... +
T Consensus 211 ----~~~~~~~~~~~~~l~~g~~------------------dg---~i~~wd~~~~~~~~~~~h~~~-----v------- 253 (435)
T 4e54_B 211 ----WFCSLDVSASSRMVVTGDN------------------VG---NVILLNMDGKELWNLRMHKKK-----V------- 253 (435)
T ss_dssp ----CCCCEEEETTTTEEEEECS------------------SS---BEEEEESSSCBCCCSBCCSSC-----E-------
T ss_pred ----cEEEEEECCCCCEEEEEeC------------------CC---cEeeeccCcceeEEEecccce-----E-------
Confidence 1112448999997765431 11 377778765433222111111 1
Q ss_pred CcccccccCcEEEEEEecCCCCCeEEEEEcCCC
Q 011049 172 GEEDINLNQLKILTSKESKTEITQYHILSWPLK 204 (494)
Q Consensus 172 ~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~ 204 (494)
....|+|++..++++.+.. ..+.++++...
T Consensus 254 ~~v~~~p~~~~~~~s~s~d---~~v~iwd~~~~ 283 (435)
T 4e54_B 254 THVALNPCCDWFLATASVD---QTVKIWDLRQV 283 (435)
T ss_dssp EEEEECTTCSSEEEEEETT---SBCCEEETTTC
T ss_pred EeeeecCCCceEEEEecCc---ceeeEEecccc
Confidence 1236788887776655432 33555565543
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.72 E-value=0.044 Score=52.37 Aligned_cols=156 Identities=5% Similarity=-0.049 Sum_probs=77.9
Q ss_pred ccceeeeccCCCCC-CC-CCeeccccccccccceecCC-CceEEEEeeeeccceEEEEEcCCCCCCC----ce-Eeeecc
Q 011049 16 PRDIIYTQPAEPAE-GE-KPEILHKLDLRFRSVSWCDD-SLALVNETWYKTSQTRTWLVCPGSKDVA----PR-VLFDRV 87 (494)
Q Consensus 16 ~~~~i~~~~~~~~~-~~-~~~~lt~~~~~~~~p~wspD-g~~i~f~~~~~~~~~~~~~~~~~~g~~~----~~-~lt~~~ 87 (494)
..+.|.++++.... +. ....+..........+|+|| ++.|+.. .. ...|.+.++..+... .. .+....
T Consensus 87 ~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~-~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 162 (416)
T 2pm9_A 87 DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASG-GN---NGEIFIWDMNKCTESPSNYTPLTPGQSM 162 (416)
T ss_dssp SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEE-CS---SSCEEBCBTTTTSSCTTTCCCBCCCCSC
T ss_pred cCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEE-cC---CCeEEEEECCCCcccccccccccccccc
Confidence 45688888882111 12 23334445556667899999 6655543 22 346778888765200 11 111111
Q ss_pred cccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeee
Q 011049 88 FENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVAL 167 (494)
Q Consensus 88 ~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~ 167 (494)
.... .-..+.|+|||..+++.... ++ .+.++|+.+++........... ..+
T Consensus 163 ~~~~----~v~~~~~~~~~~~~l~~~~~-----------------dg---~v~iwd~~~~~~~~~~~~~~~~--~~~--- 213 (416)
T 2pm9_A 163 SSVD----EVISLAWNQSLAHVFASAGS-----------------SN---FASIWDLKAKKEVIHLSYTSPN--SGI--- 213 (416)
T ss_dssp CSSC----CCCEEEECSSCTTEEEEESS-----------------SS---CEEEEETTTTEEEEEECCCCCS--SCC---
T ss_pred CCCC----CeeEEEeCCCCCcEEEEEcC-----------------CC---CEEEEECCCCCcceEEeccccc--ccc---
Confidence 1100 11134599995444444311 12 3888899887654443322100 000
Q ss_pred ccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCC
Q 011049 168 VFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 204 (494)
Q Consensus 168 ~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~ 204 (494)
-..-....|+|++..++++.........+.++++.++
T Consensus 214 ~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 214 KQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp CCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred CCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 0000124788888656665554332336777787664
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.71 E-value=0.1 Score=50.27 Aligned_cols=159 Identities=11% Similarity=0.082 Sum_probs=79.7
Q ss_pred ccceeeeccCCCCC-CCCCee--------ccccccccccceecCCC-ceEEEEeeeeccceEEEEEcCCCCCCCc-----
Q 011049 16 PRDIIYTQPAEPAE-GEKPEI--------LHKLDLRFRSVSWCDDS-LALVNETWYKTSQTRTWLVCPGSKDVAP----- 80 (494)
Q Consensus 16 ~~~~i~~~~~~~~~-~~~~~~--------lt~~~~~~~~p~wspDg-~~i~f~~~~~~~~~~~~~~~~~~g~~~~----- 80 (494)
..+.|.++|+ . +++... +..........+|+||| +.|+..+ . ...|.+.++..+ +.
T Consensus 196 ~d~~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~---dg~i~iwd~~~~--~~~~~~~ 266 (447)
T 3dw8_B 196 DDLRINLWHL---EITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSS-S---KGTIRLCDMRAS--ALCDRHS 266 (447)
T ss_dssp CSSEEEEEET---TEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEE-T---TSCEEEEETTTC--SSSCTTC
T ss_pred CCCeEEEEEC---CCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEe-C---CCeEEEEECcCC--cccccee
Confidence 3567888887 4 222222 33444455678999999 6666543 2 345777777765 32
Q ss_pred eEeeecccccc---cCCCCCC--ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCC-CceEEEEe
Q 011049 81 RVLFDRVFENV---YSDPGSP--MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINT-GSKERIWE 154 (494)
Q Consensus 81 ~~lt~~~~~~~---~~~~~~~--~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~-g~~~~l~~ 154 (494)
+.+........ +..-..+ .+.|+|||+.|+... . . .+.++|+.+ ++....+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-------------------~-~--~v~iwd~~~~~~~~~~~~ 324 (447)
T 3dw8_B 267 KLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD-------------------Y-L--SVKVWDLNMENRPVETYQ 324 (447)
T ss_dssp EEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE-------------------S-S--EEEEEETTCCSSCSCCEE
T ss_pred eEeccCCCccccccccccCceEEEEEECCCCCEEEEee-------------------C-C--eEEEEeCCCCccccceee
Confidence 22222111000 0000002 244999999887543 1 1 377777765 44322222
Q ss_pred eCcch------hhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 155 SNREK------YFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 155 ~~~~~------~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
..... .+.. ..+ .......|+|++..++. .. .-..++++++.+++...+..
T Consensus 325 ~~~~~~~~l~~~~~~-~~i-~~~~~~~~s~~~~~l~s-~s---~dg~v~iwd~~~~~~~~~~~ 381 (447)
T 3dw8_B 325 VHEYLRSKLCSLYEN-DCI-FDKFECCWNGSDSVVMT-GS---YNNFFRMFDRNTKRDITLEA 381 (447)
T ss_dssp SCGGGTTTHHHHHHT-SGG-GCCCCEEECTTSSEEEE-EC---STTEEEEEETTTCCEEEEEC
T ss_pred ccccccccccccccc-ccc-ccceEEEECCCCCEEEE-ec---cCCEEEEEEcCCCcceeeee
Confidence 11110 0000 000 00012478999987643 22 23578899988887665544
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=95.71 E-value=0.11 Score=47.75 Aligned_cols=144 Identities=5% Similarity=-0.106 Sum_probs=70.7
Q ss_pred cceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
.+.|.++++ ..++... +..........+|+|||+.|+..+. ...|.+.++... +.+.......
T Consensus 194 d~~i~i~d~---~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~----Dg~i~iwd~~~~----~~~~~~~~~~----- 257 (340)
T 4aow_A 194 DKLVKVWNL---ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK----DGQAMLWDLNEG----KHLYTLDGGD----- 257 (340)
T ss_dssp TSCEEEEET---TTTEEEEEECCCSSCEEEEEECTTSSEEEEEET----TCEEEEEETTTT----EEEEEEECSS-----
T ss_pred CCEEEEEEC---CCCceeeEecCCCCcEEEEEECCCCCEEEEEeC----CCeEEEEEeccC----ceeeeecCCc-----
Confidence 446777777 5444332 3333344556789999998775432 346777777754 3333322221
Q ss_pred CCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcc-hhhhheeeeccCCCcc
Q 011049 96 GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNRE-KYFETAVALVFGQGEE 174 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~-~~~~~~~~~~s~~~~~ 174 (494)
.-..+.|+|++..++-.. ++ .+.++|++++........... .....+. ..-...
T Consensus 258 ~v~~~~~~~~~~~~~~~~-------------------d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~h~---~~v~~l 312 (340)
T 4aow_A 258 IINALCFSPNRYWLCAAT-------------------GP---SIKIWDLEGKIIVDELKQEVISTSSKAEP---PQCTSL 312 (340)
T ss_dssp CEEEEEECSSSSEEEEEE-------------------TT---EEEEEETTTTEEEEEECCC-------CCC---CCEEEE
T ss_pred eEEeeecCCCCceeeccC-------------------CC---EEEEEECCCCeEEEeccccceeeeccCCC---CCEEEE
Confidence 111234899887554332 11 377778777643222111100 0000000 000124
Q ss_pred cccccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 175 DINLNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 175 ~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
.|+||++.++. ... -..|.++++.+|+
T Consensus 313 ~~s~dg~~l~s-gs~---Dg~v~iW~~~tGt 339 (340)
T 4aow_A 313 AWSADGQTLFA-GYT---DNLVRVWQVTIGT 339 (340)
T ss_dssp EECTTSSEEEE-EET---TSCEEEEEEEC--
T ss_pred EECCCCCEEEE-EeC---CCEEEEEeCCCcC
Confidence 78899876653 322 2356666666553
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=95.69 E-value=0.57 Score=43.04 Aligned_cols=122 Identities=11% Similarity=0.031 Sum_probs=69.3
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEE
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYIL 124 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~ 124 (494)
++++.+.+..|+++-. ....|++++++|. ..+.+...... .|.... ..|++.+|+++..
T Consensus 83 glavd~~~g~ly~~d~---~~~~I~~~~~dG~--~~~~l~~~~~~----~P~gia--vdp~~g~ly~td~---------- 141 (318)
T 3sov_A 83 GLACDWLGEKLYWTDS---ETNRIEVSNLDGS--LRKVLFWQELD----QPRAIA--LDPSSGFMYWTDW---------- 141 (318)
T ss_dssp EEEEETTTTEEEEEET---TTTEEEEEETTSC--SCEEEECSSCS----SEEEEE--EEGGGTEEEEEEC----------
T ss_pred EEEEEcCCCeEEEEEC---CCCEEEEEECCCC--cEEEEEeCCCC----CccEEE--EeCCCCEEEEEec----------
Confidence 4567776777766532 2468999999876 44555432211 122222 5666666766531
Q ss_pred EccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCC
Q 011049 125 LNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 204 (494)
Q Consensus 125 ~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~ 204 (494)
+....|+++++++...+.+....-. .+ ....+++++++++++... ...|++++.++.
T Consensus 142 ---------~~~~~I~r~~~dG~~~~~~~~~~l~----~P-------nglavd~~~~~lY~aD~~---~~~I~~~d~dG~ 198 (318)
T 3sov_A 142 ---------GEVPKIERAGMDGSSRFIIINSEIY----WP-------NGLTLDYEEQKLYWADAK---LNFIHKSNLDGT 198 (318)
T ss_dssp ---------SSSCEEEEEETTSCSCEEEECSSCS----CE-------EEEEEETTTTEEEEEETT---TTEEEEEETTSC
T ss_pred ---------CCCCEEEEEEcCCCCeEEEEECCCC----Cc-------cEEEEeccCCEEEEEECC---CCEEEEEcCCCC
Confidence 1123588888887655444322110 01 123677878888876532 457999998876
Q ss_pred ceeEee
Q 011049 205 KSSQIT 210 (494)
Q Consensus 205 ~~~~lt 210 (494)
..+.+.
T Consensus 199 ~~~~~~ 204 (318)
T 3sov_A 199 NRQAVV 204 (318)
T ss_dssp SCEEEE
T ss_pred ceEEEe
Confidence 555554
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.61 E-value=0.22 Score=47.12 Aligned_cols=93 Identities=12% Similarity=-0.009 Sum_probs=50.6
Q ss_pred CccceeeeccCCCCCCCCC-eeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc---
Q 011049 15 SPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN--- 90 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~-~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~--- 90 (494)
+..+.|+++++ ..++. ..+..........+|+|||+.++++...+ ..|.+.++..+......+.......
T Consensus 163 ~~~~~v~~~d~---~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~~ 236 (408)
T 4a11_B 163 TRGPKVQLCDL---KSGSCSHILQGHRQEILAVSWSPRYDYILATASAD---SRVKLWDVRRASGCLITLDQHNGKKSQA 236 (408)
T ss_dssp ESSSSEEEEES---SSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETT---SCEEEEETTCSSCCSEECCTTTTCSCCC
T ss_pred cCCCeEEEEeC---CCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCC---CcEEEEECCCCCccccccccccccccee
Confidence 34568888888 54443 34444555566789999999766555433 3566777765421222221111000
Q ss_pred ---ccCCCCCC--ceeeCCCCCEEEEEE
Q 011049 91 ---VYSDPGSP--MMTRTSTGTNVIAKI 113 (494)
Q Consensus 91 ---~~~~~~~~--~~~~spDG~~i~~~~ 113 (494)
.......+ .+.|+|||+.++...
T Consensus 237 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 264 (408)
T 4a11_B 237 VESANTAHNGKVNGLCFTSDGLHLLTVG 264 (408)
T ss_dssp TTTSSCSCSSCEEEEEECTTSSEEEEEE
T ss_pred eccccccccCceeEEEEcCCCCEEEEec
Confidence 00000122 245999999887665
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=95.60 E-value=0.17 Score=45.59 Aligned_cols=41 Identities=22% Similarity=0.243 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC
Q 011049 323 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 323 ~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~ 365 (494)
...+++...++.+.++. ...+|.++|||+||.+|..++...
T Consensus 118 ~~~~~~~~~l~~~~~~~--p~~~i~vtGHSLGGalA~l~a~~l 158 (279)
T 1tia_A 118 LVRDDIIKELKEVVAQN--PNYELVVVGHSLGAAVATLAATDL 158 (279)
T ss_pred HHHHHHHHHHHHHHHHC--CCCeEEEEecCHHHHHHHHHHHHH
Confidence 44566667777666543 125899999999999999888764
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.60 E-value=0.28 Score=45.37 Aligned_cols=141 Identities=11% Similarity=0.026 Sum_probs=74.5
Q ss_pred CCccceeeeccCCCCCCCC--Ceeccccccccccc------eecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeee
Q 011049 14 VSPRDIIYTQPAEPAEGEK--PEILHKLDLRFRSV------SWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD 85 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~--~~~lt~~~~~~~~p------~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~ 85 (494)
-+..+.|.++++ ..++ ...+.......... +|+|||+.|+..+. ...|.+.++..+......+..
T Consensus 86 ~~~dg~i~iwd~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~----d~~i~vwd~~~~~~~~~~~~~ 158 (357)
T 3i2n_A 86 GDFGGNLHIWNL---EAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSR----DGTVKVWDPRQKDDPVANMEP 158 (357)
T ss_dssp EETTSCEEEECT---TSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEET----TSCEEEECTTSCSSCSEEECC
T ss_pred ecCCCeEEEEeC---CCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeC----CCeEEEEeCCCCCCcceeccc
Confidence 345678999998 5444 33344333333333 68999998876542 346778888765212223322
Q ss_pred cccccccCCCCCCc--ee----eCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcch
Q 011049 86 RVFENVYSDPGSPM--MT----RTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREK 159 (494)
Q Consensus 86 ~~~~~~~~~~~~~~--~~----~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~ 159 (494)
..+.. ..++ +. |+|||+.++.... ++ .+.++|+.+++..........
T Consensus 159 ~~~~~-----~~~v~~~~~~~~~~~~~~~l~~~~~------------------d~---~i~i~d~~~~~~~~~~~~~~~- 211 (357)
T 3i2n_A 159 VQGEN-----KRDCWTVAFGNAYNQEERVVCAGYD------------------NG---DIKLFDLRNMALRWETNIKNG- 211 (357)
T ss_dssp CTTSC-----CCCEEEEEEECCCC-CCCEEEEEET------------------TS---EEEEEETTTTEEEEEEECSSC-
T ss_pred cCCCC-----CCceEEEEEEeccCCCCCEEEEEcc------------------CC---eEEEEECccCceeeecCCCCc-
Confidence 22211 1121 11 6899998776641 11 388889988775443332221
Q ss_pred hhhheeeeccCCCcccccc---cCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 160 YFETAVALVFGQGEEDINL---NQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 160 ~~~~~~~~~s~~~~~~~s~---d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
. ....|+| ++..++.... -..+.++++.+
T Consensus 212 ----v-------~~~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~ 243 (357)
T 3i2n_A 212 ----V-------CSLEFDRKDISMNKLVATSL----EGKFHVFDMRT 243 (357)
T ss_dssp ----E-------EEEEESCSSSSCCEEEEEES----TTEEEEEEEEE
T ss_pred ----e-------EEEEcCCCCCCCCEEEEECC----CCeEEEEeCcC
Confidence 1 1236777 7776655332 24566666543
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=95.55 E-value=0.02 Score=54.13 Aligned_cols=85 Identities=9% Similarity=-0.003 Sum_probs=44.5
Q ss_pred CccceeeeccCCCCCCCC----CeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCC--CceEeee-cc
Q 011049 15 SPRDIIYTQPAEPAEGEK----PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDV--APRVLFD-RV 87 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~----~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~--~~~~lt~-~~ 87 (494)
+..+.|.++++ ..++ ...+..........+|+|||+.|+..+. ...|.+.+++.+.. ..+.+.. ..
T Consensus 74 s~d~~v~vwd~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~~~~h~ 146 (377)
T 3dwl_C 74 SQDRNAYVYEK---RPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSG----ARVISVCYFEQENDWWVSKHLKRPLR 146 (377)
T ss_dssp ETTSSEEEC---------CCCCEEECCCCSSCEEEEECCTTSSCCEEEES----SSCEEECCC-----CCCCEEECSSCC
T ss_pred eCCCeEEEEEc---CCCCceeeeeEecccCCceEEEEECCCCCEEEEEec----CCeEEEEEECCcccceeeeEeecccC
Confidence 44568888888 5544 2334445555667899999998887653 33577777776510 0223322 11
Q ss_pred cccccCCCCCCceeeCCCCCEEEEEE
Q 011049 88 FENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 88 ~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
.. -..+.|+|||+.++...
T Consensus 147 ~~-------v~~~~~~~~~~~l~~~~ 165 (377)
T 3dwl_C 147 ST-------ILSLDWHPNNVLLAAGC 165 (377)
T ss_dssp SC-------EEEEEECTTSSEEEEEE
T ss_pred CC-------eEEEEEcCCCCEEEEEe
Confidence 11 11234999999887765
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=95.52 E-value=0.097 Score=48.93 Aligned_cols=85 Identities=8% Similarity=-0.010 Sum_probs=45.9
Q ss_pred CccceeeeccCCCCCCCCCee---ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceE-eeeccccc
Q 011049 15 SPRDIIYTQPAEPAEGEKPEI---LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRV-LFDRVFEN 90 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~---lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~-lt~~~~~~ 90 (494)
+..+.|.++++ +.++... +...........|+|||+.|+..+. ...+.+.+++.+ .... +.......
T Consensus 71 ~~dg~i~vwd~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~v~i~d~~~~--~~~~~~~~~~~~~ 141 (372)
T 1k8k_C 71 GTDRNAYVWTL---KGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSG----SRVISICYFEQE--NDWWVCKHIKKPI 141 (372)
T ss_dssp ETTSCEEEEEE---ETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEET----TSSEEEEEEETT--TTEEEEEEECTTC
T ss_pred cCCCeEEEEEC---CCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeC----CCEEEEEEecCC--Ccceeeeeeeccc
Confidence 34567888887 5554222 2333445567889999998887642 233444444443 2211 11111110
Q ss_pred ccCCCCCC--ceeeCCCCCEEEEEE
Q 011049 91 VYSDPGSP--MMTRTSTGTNVIAKI 113 (494)
Q Consensus 91 ~~~~~~~~--~~~~spDG~~i~~~~ 113 (494)
..+ .+.|+|||+.++...
T Consensus 142 -----~~~i~~~~~~~~~~~l~~~~ 161 (372)
T 1k8k_C 142 -----RSTVLSLDWHPNSVLLAAGS 161 (372)
T ss_dssp -----CSCEEEEEECTTSSEEEEEE
T ss_pred -----CCCeeEEEEcCCCCEEEEEc
Confidence 111 244899999877654
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=95.51 E-value=0.099 Score=54.07 Aligned_cols=140 Identities=10% Similarity=0.013 Sum_probs=74.0
Q ss_pred eeeeccCCCCCCCCCeeccccc-cccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 19 IIYTQPAEPAEGEKPEILHKLD-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~~~-~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
.|+++++ +|...+.+.... ..-...++.|++..|+++.+.. ...|++++++|. ..+.+..... ..|..
T Consensus 476 ~I~v~d~---dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~--~~~I~~~~~dG~--~~~~l~~~~l----~~PnG 544 (699)
T 1n7d_A 476 TVSVADT---KGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGT--PAKIKKGGLNGV--DIYSLVTENI----QWPNG 544 (699)
T ss_dssp CEEEEBS---SSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSS--SCCEEBCCSSSC--CCCEESCSSC----SSCCC
T ss_pred eEEEEec---CCCceEEEEeCCCCCcceEEEccCCCcEEEcccCC--CCeEEEEeCCCC--CeeEEEeCCC----CCccE
Confidence 4455554 444444443322 2234567899888877764321 368999999875 3344432211 12333
Q ss_pred CceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccccc
Q 011049 98 PMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDIN 177 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s 177 (494)
.. ++|++.+|++.-. ....|.++++++...+.+...... + .....++
T Consensus 545 la--vd~~~~~LY~aD~--------------------~~~~I~~~d~dG~~~~~~~~~~~~--------~---~~P~gla 591 (699)
T 1n7d_A 545 IT--LDLLSGRLYWVDS--------------------KLHSISSIDVNGGNRKTILEDEKR--------L---AHPFSLA 591 (699)
T ss_dssp EE--ECTTTCCEEEEET--------------------TTTEEEEECSSSSCCEEECCCSSS--------C---SSCCCCE
T ss_pred EE--EeccCCEEEEEec--------------------CCCeEEEEccCCCceEEEEecCCc--------C---CCceEeE
Confidence 33 8999988887642 122488888876554444322111 0 0011333
Q ss_pred ccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 178 LNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 178 ~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
.+++.++++.. ....|++++..+++
T Consensus 592 vd~~~lywtd~---~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 592 VFEDKVFWTDI---INEAIFSANRLTGS 616 (699)
T ss_dssp EETTEEEEECS---TTTCEEEEETTTEE
T ss_pred EECCEEEEEeC---CCCeEEEEEccCCC
Confidence 45555555432 23467777765544
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=95.51 E-value=0.085 Score=49.86 Aligned_cols=111 Identities=8% Similarity=0.006 Sum_probs=63.7
Q ss_pred CCccceeeeccCCCCCCCCCeecccc-------------ccccccceecCCCceEEEEeeee------ccceEEEEEcCC
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEILHKL-------------DLRFRSVSWCDDSLALVNETWYK------TSQTRTWLVCPG 74 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~lt~~-------------~~~~~~p~wspDg~~i~f~~~~~------~~~~~~~~~~~~ 74 (494)
+++.+.||++|+ .++.++.+..- +........+||++.++.....+ ...++||++|+.
T Consensus 243 vs~~g~V~v~d~---~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~ 319 (386)
T 3sjl_D 243 PTYTGKIHQIDL---SSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAK 319 (386)
T ss_dssp EBTTSEEEEEEC---TTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETT
T ss_pred EeCCCEEEEEEC---CCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECC
Confidence 455678888888 55554333221 11222356788888877754311 125799999999
Q ss_pred CCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEe
Q 011049 75 SKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE 154 (494)
Q Consensus 75 ~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~ 154 (494)
++ + .+..-..... +. .+.+||||+.++|..+.. .+ .+.++|..+++...-..
T Consensus 320 t~--k--v~~~i~vg~~---~~--~lavs~D~~~~ly~tn~~----------------~~---~VsViD~~t~k~~~~i~ 371 (386)
T 3sjl_D 320 TG--E--RLAKFEMGHE---ID--SINVSQDEKPLLYALSTG----------------DK---TLYIHDAESGEELRSVN 371 (386)
T ss_dssp TC--C--EEEEEEEEEE---EC--EEEECSSSSCEEEEEETT----------------TT---EEEEEETTTCCEEEEEC
T ss_pred CC--e--EEEEEECCCC---cc--eEEECCCCCeEEEEEcCC----------------CC---eEEEEECCCCcEEEEec
Confidence 77 2 2222211110 01 123799998777776320 11 38899999988665444
Q ss_pred e
Q 011049 155 S 155 (494)
Q Consensus 155 ~ 155 (494)
.
T Consensus 372 ~ 372 (386)
T 3sjl_D 372 Q 372 (386)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=95.48 E-value=0.43 Score=43.87 Aligned_cols=155 Identities=7% Similarity=-0.044 Sum_probs=84.5
Q ss_pred CCCCCCCccceeeeccCCCCCCCC--CeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeec
Q 011049 9 DANVEVSPRDIIYTQPAEPAEGEK--PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR 86 (494)
Q Consensus 9 ~~~~~~~~~~~i~~~~~~~~~~~~--~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~ 86 (494)
.+-...+.+..|..+++ ++.. .+.+..+-.......|.++++.|+++- .....|++++++++......+...
T Consensus 4 ~p~ll~~~~~~I~~i~l---~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D---~~~~~I~r~~~~g~~~~~~~~~~~ 77 (318)
T 3sov_A 4 APLLLYANRRDLRLVDA---TNGKENATIVVGGLEDAAAVDFVFSHGLIYWSD---VSEEAIKRTEFNKTESVQNVVVSG 77 (318)
T ss_dssp CCEEEEECEEEEEEEET---TCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEE---TTTTEEEEEETTSSSCCCEEEEEC
T ss_pred ccEEEEEccCeEEEEEC---CCCceEEEEEecCCCccEEEEEEeCCCEEEEEE---CCCCcEEEEEccCCCceEEEEcCC
Confidence 33344556778999998 6553 222322222334678999877877763 224689999998762111222211
Q ss_pred ccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheee
Q 011049 87 VFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVA 166 (494)
Q Consensus 87 ~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~ 166 (494)
. ..|.... ..+.+..|++.-. ....|.++++++...+.+...... .+.
T Consensus 78 l-----~~p~gla--vd~~~g~ly~~d~--------------------~~~~I~~~~~dG~~~~~l~~~~~~----~P~- 125 (318)
T 3sov_A 78 L-----LSPDGLA--CDWLGEKLYWTDS--------------------ETNRIEVSNLDGSLRKVLFWQELD----QPR- 125 (318)
T ss_dssp C-----SCCCEEE--EETTTTEEEEEET--------------------TTTEEEEEETTSCSCEEEECSSCS----SEE-
T ss_pred C-----CCccEEE--EEcCCCeEEEEEC--------------------CCCEEEEEECCCCcEEEEEeCCCC----Ccc-
Confidence 1 1122223 5666667776541 112477888877654444322110 111
Q ss_pred eccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEe
Q 011049 167 LVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQI 209 (494)
Q Consensus 167 ~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~l 209 (494)
...++|.++.++++..+ ..+.|++++.++...+.+
T Consensus 126 ------giavdp~~g~ly~td~~--~~~~I~r~~~dG~~~~~~ 160 (318)
T 3sov_A 126 ------AIALDPSSGFMYWTDWG--EVPKIERAGMDGSSRFII 160 (318)
T ss_dssp ------EEEEEGGGTEEEEEECS--SSCEEEEEETTSCSCEEE
T ss_pred ------EEEEeCCCCEEEEEecC--CCCEEEEEEcCCCCeEEE
Confidence 12556666777776432 346899999877655544
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=95.47 E-value=0.087 Score=49.64 Aligned_cols=70 Identities=13% Similarity=0.097 Sum_probs=42.7
Q ss_pred ceecCCCceEEEEeeeec-------cceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCc
Q 011049 46 VSWCDDSLALVNETWYKT-------SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEND 118 (494)
Q Consensus 46 p~wspDg~~i~f~~~~~~-------~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~ 118 (494)
.+++|||+.++.....++ ....|+++|+.++ +.+..-+... |.. +.+||||++++ ..+
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~----~~v~~i~~~~----p~~--ia~spdg~~l~-v~n---- 323 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK----QRVARIPGRD----ALS--MTIDQQRNLML-TLD---- 323 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT----EEEEEEECTT----CCE--EEEETTTTEEE-EEC----
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC----cEEEEEecCC----eeE--EEECCCCCEEE-EeC----
Confidence 579999988765433121 1358999999876 3333222211 222 23899999665 431
Q ss_pred cceEEEEccCCCCCCCCCCceEeeecCCC
Q 011049 119 EQIYILLNGRGFTPEGNIPFLDLFDINTG 147 (494)
Q Consensus 119 ~~~~~~~~~~g~~~~~~~~~l~~~d~~~g 147 (494)
. ..+.++|++++
T Consensus 324 --------------~---~~v~v~D~~t~ 335 (361)
T 2oiz_A 324 --------------G---GNVNVYDISQP 335 (361)
T ss_dssp --------------S---SCEEEEECSSS
T ss_pred --------------C---CeEEEEECCCC
Confidence 1 23889999998
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=95.42 E-value=0.15 Score=49.33 Aligned_cols=86 Identities=7% Similarity=-0.050 Sum_probs=49.8
Q ss_pred CccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
+..+.|.++|+ .+.....+..........+|+|+++.++.+...++ .|.+.++.........+ ...+.
T Consensus 228 ~~dg~i~~wd~---~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~---~v~iwd~~~~~~~~~~~-~~~~h----- 295 (435)
T 4e54_B 228 DNVGNVILLNM---DGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQ---TVKIWDLRQVRGKASFL-YSLPH----- 295 (435)
T ss_dssp CSSSBEEEEES---SSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTS---BCCEEETTTCCSSSCCS-BCCBC-----
T ss_pred eCCCcEeeecc---CcceeEEEecccceEEeeeecCCCceEEEEecCcc---eeeEEecccccccceEE-Eeeec-----
Confidence 34568889988 65555555555555667899999987776654443 34444555432121111 11111
Q ss_pred CCCCc--eeeCCCCCEEEEEE
Q 011049 95 PGSPM--MTRTSTGTNVIAKI 113 (494)
Q Consensus 95 ~~~~~--~~~spDG~~i~~~~ 113 (494)
..++ ++|||||++|+...
T Consensus 296 -~~~v~~~~~spdg~~l~s~~ 315 (435)
T 4e54_B 296 -RHPVNAACFSPDGARLLTTD 315 (435)
T ss_dssp -SSCEEECCBCTTSSEEEEEE
T ss_pred -cccccceeECCCCCeeEEEc
Confidence 1221 33899999887654
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=95.41 E-value=1.2 Score=42.51 Aligned_cols=152 Identities=7% Similarity=-0.084 Sum_probs=84.2
Q ss_pred CCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCC--CCceEeeecccccc
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKD--VAPRVLFDRVFENV 91 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~--~~~~~lt~~~~~~~ 91 (494)
+..+..|..+++ ++...+.+.........++|.++++.|+++-. ....|+++++++.. .....+......
T Consensus 88 ~~~~~~I~~i~l---~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~---~~~~I~~~~~~g~~~~~~~~~~~~~~~~-- 159 (400)
T 3p5b_L 88 FTNRHEVRKMTL---DRSEYTSLIPNLRNVVALDTEVASNRIYWSDL---SQRMICSTQLDRAHGVSSYDTVISRDIQ-- 159 (400)
T ss_dssp EEETTEEEEECT---TSCSCEEEECSCSCEEEEEEETTTTEEEEEET---TTTEEEEEEC------CCCEEEECSSCS--
T ss_pred EeccceeEEEcc---CCcceeEeccccCcceEEeeeeccCceEEEec---CCCeEEEEEcccCCCCCcceEEEeCCCC--
Confidence 344567888888 66666666555444557889998888887632 24689999988731 123333321110
Q ss_pred cCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCC
Q 011049 92 YSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQ 171 (494)
Q Consensus 92 ~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~ 171 (494)
.|.... ..+.+..|++.-. ....|.+++++++..+.+...... .+.
T Consensus 160 --~p~gla--vD~~~~~lY~~d~--------------------~~~~I~~~~~~g~~~~~l~~~~~~----~P~------ 205 (400)
T 3p5b_L 160 --APDGLA--VDWIHSNIYWTDS--------------------VLGTVSVADTKGVKRKTLFRENGS----KPR------ 205 (400)
T ss_dssp --CEEEEE--EETTTTEEEEEET--------------------TTTEEEEECTTTCSEEEEEECSSC----CEE------
T ss_pred --CcccEE--EEecCCceEEEEC--------------------CCCeEEEEeCCCCceEEEEeCCCC----Ccc------
Confidence 111112 3455556665531 112488888887765555432211 011
Q ss_pred CcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEee
Q 011049 172 GEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQIT 210 (494)
Q Consensus 172 ~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt 210 (494)
...++|.++.++++..+ ..+.|++.++++...+.+.
T Consensus 206 -~iavdp~~g~ly~td~~--~~~~I~~~~~dG~~~~~~~ 241 (400)
T 3p5b_L 206 -AIVVDPVHGFMYWTDWG--TPAKIKKGGLNGVDIYSLV 241 (400)
T ss_dssp -EEEEETTTTEEEEEECS--SSCCEEEEETTSCSCEEEE
T ss_pred -eEEEecccCeEEEEeCC--CCCEEEEEeCCCCccEEEE
Confidence 12556666777776533 3467999998876655553
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=95.32 E-value=0.3 Score=46.71 Aligned_cols=139 Identities=12% Similarity=0.041 Sum_probs=73.7
Q ss_pred ccceeeeccCCCCCCCCCe-eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 16 PRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~-~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
..+.|.++|+ +.++.. .+..........+|+|||+.|+-.+ .+ ..|.+.++.++ +. +....+...
T Consensus 128 ~Dg~i~vwd~---~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs-~D---~~i~iwd~~~~--~~--~~~~~~h~~--- 193 (410)
T 1vyh_C 128 EDATIKVWDY---ETGDFERTLKGHTDSVQDISFDHSGKLLASCS-AD---MTIKLWDFQGF--EC--IRTMHGHDH--- 193 (410)
T ss_dssp SSSCEEEEET---TTCCCCEEECCCSSCEEEEEECTTSSEEEEEE-TT---SCCCEEETTSS--CE--EECCCCCSS---
T ss_pred CCCeEEEEEC---CCCcEEEEEeccCCcEEEEEEcCCCCEEEEEe-CC---CeEEEEeCCCC--ce--eEEEcCCCC---
Confidence 3457888888 555543 3443444556788999999766543 22 33555566654 32 222222110
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcc
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEE 174 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~ 174 (494)
.-..+.|+|||+.++..+. ++ .+.++|+.+++.......... .+ ...
T Consensus 194 -~V~~v~~~p~~~~l~s~s~------------------D~---~i~~wd~~~~~~~~~~~~h~~-----~v------~~~ 240 (410)
T 1vyh_C 194 -NVSSVSIMPNGDHIVSASR------------------DK---TIKMWEVQTGYCVKTFTGHRE-----WV------RMV 240 (410)
T ss_dssp -CEEEEEECSSSSEEEEEET------------------TS---EEEEEETTTCCEEEEEECCSS-----CE------EEE
T ss_pred -CEEEEEEeCCCCEEEEEeC------------------CC---eEEEEECCCCcEEEEEeCCCc-----cE------EEE
Confidence 1112448999998765541 11 388889888765443332211 00 112
Q ss_pred cccccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 175 DINLNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 175 ~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
.+++++..++. .+. -..+.+++..+++
T Consensus 241 ~~~~~g~~l~s-~s~---D~~v~vwd~~~~~ 267 (410)
T 1vyh_C 241 RPNQDGTLIAS-CSN---DQTVRVWVVATKE 267 (410)
T ss_dssp EECTTSSEEEE-EET---TSCEEEEETTTCC
T ss_pred EECCCCCEEEE-EcC---CCeEEEEECCCCc
Confidence 56777765543 322 2346666665544
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.30 E-value=0.25 Score=45.99 Aligned_cols=117 Identities=9% Similarity=-0.009 Sum_probs=58.5
Q ss_pred ccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEee-ecccccccCCCCCC--ceeeCCCCCEEEEEEeccCc
Q 011049 42 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF-DRVFENVYSDPGSP--MMTRTSTGTNVIAKIKKEND 118 (494)
Q Consensus 42 ~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt-~~~~~~~~~~~~~~--~~~~spDG~~i~~~~~~~~~ 118 (494)
.....+|||||+.|+..+. ++ .-.|| ++.++ ...... ...+. ..+ .+.|||||++|+..+.
T Consensus 18 ~v~~l~~sp~g~~las~~~-D~-~i~iw--~~~~~--~~~~~~~~~~~h------~~~v~~~~~sp~g~~l~s~s~---- 81 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGG-DR-RIRIW--GTEGD--SWICKSVLSEGH------QRTVRKVAWSPCGNYLASASF---- 81 (345)
T ss_dssp CEEEEEECTTSSCEEEEET-TS-CEEEE--EEETT--EEEEEEEECSSC------SSCEEEEEECTTSSEEEEEET----
T ss_pred cEEEEEECCCCCEEEEEcC-CC-eEEEE--EcCCC--cceeeeeecccc------CCcEEEEEECCCCCEEEEEEC----
Confidence 3456789999998886543 22 24455 44443 211111 11111 122 2449999998876541
Q ss_pred cceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEE
Q 011049 119 EQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHI 198 (494)
Q Consensus 119 ~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~ 198 (494)
++ .+.++|+++++.+.+..-.+. ...+ ....|+|+++.++. .+. -..+.+
T Consensus 82 --------------D~---~v~iw~~~~~~~~~~~~~~~h---~~~v------~~v~~sp~~~~l~s-~s~---D~~v~i 131 (345)
T 3fm0_A 82 --------------DA---TTCIWKKNQDDFECVTTLEGH---ENEV------KSVAWAPSGNLLAT-CSR---DKSVWV 131 (345)
T ss_dssp --------------TS---CEEEEEECCC-EEEEEEECCC---SSCE------EEEEECTTSSEEEE-EET---TSCEEE
T ss_pred --------------CC---cEEEEEccCCCeEEEEEccCC---CCCc------eEEEEeCCCCEEEE-EEC---CCeEEE
Confidence 11 266677766644333222211 0000 12478888876554 322 234666
Q ss_pred EEcCCC
Q 011049 199 LSWPLK 204 (494)
Q Consensus 199 ~~~~~~ 204 (494)
+++..+
T Consensus 132 wd~~~~ 137 (345)
T 3fm0_A 132 WEVDEE 137 (345)
T ss_dssp EEECTT
T ss_pred EECCCC
Confidence 666544
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=95.28 E-value=0.21 Score=46.41 Aligned_cols=142 Identities=13% Similarity=0.091 Sum_probs=77.3
Q ss_pred CccceeeeccCCCCCCCCCe-eccc-----cccccccceecCC----CceEEEEeeeeccceEEEEEcCCCCCCCceEee
Q 011049 15 SPRDIIYTQPAEPAEGEKPE-ILHK-----LDLRFRSVSWCDD----SLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 84 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~-~lt~-----~~~~~~~p~wspD----g~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt 84 (494)
+..+.|.++++ ..++.. .+.. ........+|+|| |+.|+..+ . ...|.+.++..+ +.....
T Consensus 41 ~~~~~v~vw~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~-~---dg~i~v~d~~~~--~~~~~~ 111 (366)
T 3k26_A 41 VGSNRVTLYEC---HSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG-S---RGIIRIINPITM--QCIKHY 111 (366)
T ss_dssp EETTEEEEEEE---CGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE-T---TCEEEEECTTTC--CEEEEE
T ss_pred CCCCEEEEEEc---CCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec-C---CCEEEEEEchhc--eEeeee
Confidence 34557888887 533332 3322 1233556789999 55555543 2 457888888866 433333
Q ss_pred ecccccccCCCCCCceeeCC-CCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEee-Ccchhhh
Q 011049 85 DRVFENVYSDPGSPMMTRTS-TGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES-NREKYFE 162 (494)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~sp-DG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~-~~~~~~~ 162 (494)
..... .-..+.|+| |++.++.... ++ .|.++|+.+++....... .+. -.
T Consensus 112 ~~~~~------~i~~~~~~~~~~~~l~s~~~------------------dg---~i~iwd~~~~~~~~~~~~~~~~--~~ 162 (366)
T 3k26_A 112 VGHGN------AINELKFHPRDPNLLLSVSK------------------DH---ALRLWNIQTDTLVAIFGGVEGH--RD 162 (366)
T ss_dssp ESCCS------CEEEEEECSSCTTEEEEEET------------------TS---CEEEEETTTTEEEEEECSTTSC--SS
T ss_pred cCCCC------cEEEEEECCCCCCEEEEEeC------------------CC---eEEEEEeecCeEEEEecccccc--cC
Confidence 21111 111244899 8887766541 12 388899988765554421 110 00
Q ss_pred heeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 163 TAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 163 ~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
.. ....|+|++..++.... -..+.++++.+++
T Consensus 163 ~v-------~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~ 194 (366)
T 3k26_A 163 EV-------LSADYDLLGEKIMSCGM----DHSLKLWRINSKR 194 (366)
T ss_dssp CE-------EEEEECTTSSEEEEEET----TSCEEEEESCSHH
T ss_pred ce-------eEEEECCCCCEEEEecC----CCCEEEEECCCCc
Confidence 01 12378888877654332 2467778876543
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.28 E-value=0.061 Score=51.32 Aligned_cols=55 Identities=16% Similarity=0.085 Sum_probs=38.2
Q ss_pred CccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
+..+.|.+++. .+.....+...........|+|||+.|+..+. ...+.+.++..+
T Consensus 127 ~~dg~i~i~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~ 181 (425)
T 1r5m_A 127 VENGELRLWNK---TGALLNVLNFHRAPIVSVKWNKDGTHIISMDV----ENVTILWNVISG 181 (425)
T ss_dssp ETTSCEEEEET---TSCEEEEECCCCSCEEEEEECTTSSEEEEEET----TCCEEEEETTTT
T ss_pred eCCCeEEEEeC---CCCeeeeccCCCccEEEEEECCCCCEEEEEec----CCeEEEEECCCC
Confidence 34567888886 55555566656666678899999998886542 345777777765
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.23 E-value=0.29 Score=45.34 Aligned_cols=82 Identities=18% Similarity=0.078 Sum_probs=50.4
Q ss_pred CccceeeeccCCCCCCCCCeeccc--cccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCce--Eeeeccccc
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHK--LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPR--VLFDRVFEN 90 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~--~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~--~lt~~~~~~ 90 (494)
+..+.|.++|+ ..++...+.. ........+|+|||+.|+..+ ....|.+.++..+ +.. .+.. ..
T Consensus 146 s~dg~i~~wd~---~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~----~dg~i~iwd~~~~--~~~~~~~~~--~h- 213 (343)
T 3lrv_A 146 DNRGTIGFQSY---EDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYS----PDGILDVYNLSSP--DQASSRFPV--DE- 213 (343)
T ss_dssp ETTCCEEEEES---SSSCEEEEECCCSSCCCCEEEECTTSCEEEEEC----TTSCEEEEESSCT--TSCCEECCC--CT-
T ss_pred eCCCcEEEEEC---CCCcEEEEEecCCCCceEEEEECCCCCEEEEEc----CCCEEEEEECCCC--CCCccEEec--cC-
Confidence 44568888888 6666544332 222356778999999877643 2456778888766 322 2221 01
Q ss_pred ccCCCCCC--ceeeCCCCCEEEEEE
Q 011049 91 VYSDPGSP--MMTRTSTGTNVIAKI 113 (494)
Q Consensus 91 ~~~~~~~~--~~~~spDG~~i~~~~ 113 (494)
..+ .+.|+|||+.++...
T Consensus 214 -----~~~v~~l~fs~~g~~l~s~~ 233 (343)
T 3lrv_A 214 -----EAKIKEVKFADNGYWMVVEC 233 (343)
T ss_dssp -----TSCEEEEEECTTSSEEEEEE
T ss_pred -----CCCEEEEEEeCCCCEEEEEe
Confidence 122 245899999887664
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.22 E-value=0.46 Score=43.97 Aligned_cols=116 Identities=4% Similarity=-0.016 Sum_probs=66.0
Q ss_pred ccccceecC--CCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCcc
Q 011049 42 RFRSVSWCD--DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDE 119 (494)
Q Consensus 42 ~~~~p~wsp--Dg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~ 119 (494)
.....+|+| ||+.|+-.+. ...+.+.++..+ +...+....... .-..+.|+|||+.++....
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~----dg~i~~wd~~~~--~~~~~~~~~~~~-----~i~~~~~~pdg~~lasg~~----- 190 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADN----RGTIGFQSYEDD--SQYIVHSAKSDV-----EYSSGVLHKDSLLLALYSP----- 190 (343)
T ss_dssp CEEEEECCC---CCEEEEEET----TCCEEEEESSSS--CEEEEECCCSSC-----CCCEEEECTTSCEEEEECT-----
T ss_pred CEEEEEcCCCCCCCEEEEEeC----CCcEEEEECCCC--cEEEEEecCCCC-----ceEEEEECCCCCEEEEEcC-----
Confidence 355678999 9998775542 345777787766 443333222111 1113459999997765431
Q ss_pred ceEEEEccCCCCCCCCCCceEeeecCCCceE-EEEee-CcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEE
Q 011049 120 QIYILLNGRGFTPEGNIPFLDLFDINTGSKE-RIWES-NREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYH 197 (494)
Q Consensus 120 ~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~-~l~~~-~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~ 197 (494)
++ .+.++|+.+++.. ..+.. ... .. ....|+|++..++... . . .+.
T Consensus 191 -------------dg---~i~iwd~~~~~~~~~~~~~~h~~----~v-------~~l~fs~~g~~l~s~~-~--~--~v~ 238 (343)
T 3lrv_A 191 -------------DG---ILDVYNLSSPDQASSRFPVDEEA----KI-------KEVKFADNGYWMVVEC-D--Q--TVV 238 (343)
T ss_dssp -------------TS---CEEEEESSCTTSCCEECCCCTTS----CE-------EEEEECTTSSEEEEEE-S--S--BEE
T ss_pred -------------CC---EEEEEECCCCCCCccEEeccCCC----CE-------EEEEEeCCCCEEEEEe-C--C--eEE
Confidence 12 3888898887654 22222 110 01 1247889987666543 2 2 688
Q ss_pred EEEcCCCc
Q 011049 198 ILSWPLKK 205 (494)
Q Consensus 198 ~~~~~~~~ 205 (494)
++++...+
T Consensus 239 iwd~~~~~ 246 (343)
T 3lrv_A 239 CFDLRKDV 246 (343)
T ss_dssp EEETTSST
T ss_pred EEEcCCCC
Confidence 88877654
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.19 E-value=0.45 Score=43.89 Aligned_cols=83 Identities=7% Similarity=-0.055 Sum_probs=46.1
Q ss_pred CccceeeeccCCCCCCCC-Ce-ecccccc----ccc----cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEee
Q 011049 15 SPRDIIYTQPAEPAEGEK-PE-ILHKLDL----RFR----SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 84 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~-~~-~lt~~~~----~~~----~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt 84 (494)
+..+.|.++|+ ..++ +. .+..... ... .++|+||++.|+..+ ....|.+.++.++ +.....
T Consensus 136 ~~d~~i~vwd~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~----~d~~i~i~d~~~~--~~~~~~ 206 (357)
T 3i2n_A 136 SRDGTVKVWDP---RQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGY----DNGDIKLFDLRNM--ALRWET 206 (357)
T ss_dssp ETTSCEEEECT---TSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEE----TTSEEEEEETTTT--EEEEEE
T ss_pred eCCCeEEEEeC---CCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEc----cCCeEEEEECccC--ceeeec
Confidence 44567888888 4443 22 2322111 122 234899999887654 2457888888876 433333
Q ss_pred ecccccccCCCCCCceeeCC---CCCEEEEEE
Q 011049 85 DRVFENVYSDPGSPMMTRTS---TGTNVIAKI 113 (494)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~sp---DG~~i~~~~ 113 (494)
..... -..+.|+| +|..++...
T Consensus 207 ~~~~~-------v~~~~~~~~~~~~~~l~~~~ 231 (357)
T 3i2n_A 207 NIKNG-------VCSLEFDRKDISMNKLVATS 231 (357)
T ss_dssp ECSSC-------EEEEEESCSSSSCCEEEEEE
T ss_pred CCCCc-------eEEEEcCCCCCCCCEEEEEC
Confidence 22211 11234899 898877654
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=95.18 E-value=0.41 Score=45.66 Aligned_cols=103 Identities=13% Similarity=0.069 Sum_probs=60.2
Q ss_pred eeeeccCCCCCCCCCeeccccccc-cccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 19 IIYTQPAEPAEGEKPEILHKLDLR-FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~~~~~-~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
.|+++++ +|...+.+...... -...+..|.+..|+++-+. ....|++++++|. ..+.+...... .|..
T Consensus 182 ~I~~~~~---~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~--~~~~I~~~~~dG~--~~~~~~~~~l~----~P~g 250 (400)
T 3p5b_L 182 TVSVADT---KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG--TPAKIKKGGLNGV--DIYSLVTENIQ----WPNG 250 (400)
T ss_dssp EEEEECT---TTCSEEEEEECSSCCEEEEEEETTTTEEEEEECS--SSCCEEEEETTSC--SCEEEECSSCS----CEEE
T ss_pred eEEEEeC---CCCceEEEEeCCCCCcceEEEecccCeEEEEeCC--CCCEEEEEeCCCC--ccEEEEECCCC----ceEE
Confidence 5555555 55554444443222 2345788887777776432 2468999999986 54555432211 1222
Q ss_pred CceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEe
Q 011049 98 PMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE 154 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~ 154 (494)
+.++|++.+|++.-. ....|+++|++++..+.+..
T Consensus 251 --lavd~~~~~lY~aD~--------------------~~~~I~~~d~dG~~~~~~~~ 285 (400)
T 3p5b_L 251 --ITLDLLSGRLYWVDS--------------------KLHSISSIDVNGGNRKTILE 285 (400)
T ss_dssp --EEEETTTTEEEEEET--------------------TTTEEEEEETTSCCCEEEEE
T ss_pred --EEEEeCCCEEEEEEC--------------------CCCEEEEEeCCCCccEEEEe
Confidence 237888888877631 12258889988776555544
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=95.16 E-value=0.09 Score=53.12 Aligned_cols=94 Identities=10% Similarity=-0.007 Sum_probs=57.8
Q ss_pred cceeeeccCCCCCCCCC--eeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 17 RDIIYTQPAEPAEGEKP--EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~--~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
.+.|+++++ .+++. ..+..........+|||||+.|+..+. ...|.+.++..+ + .+....+..
T Consensus 466 d~~i~~~~~---~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~----dg~i~iw~~~~~--~--~~~~~~~~h---- 530 (615)
T 1pgu_A 466 GNTIQVFKL---SDLEVSFDLKTPLRAKPSYISISPSETYIAAGDV----MGKILLYDLQSR--E--VKTSRWAFR---- 530 (615)
T ss_dssp TSCEEEEET---TEEEEEEECSSCCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTT--E--EEECCSCCC----
T ss_pred CCeEEEEEC---CCccccccccCCccCceEEEEECCCCCEEEEcCC----CCeEEEeeCCCC--c--ceeEeecCC----
Confidence 567888888 54443 233344445567889999998876542 346788888765 3 333222101
Q ss_pred CCCC--ceeeCC----------CCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCC
Q 011049 95 PGSP--MMTRTS----------TGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTG 147 (494)
Q Consensus 95 ~~~~--~~~~sp----------DG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g 147 (494)
..+ .+.||| ||+.|+.... ++ .+.++|++++
T Consensus 531 -~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~------------------dg---~i~iw~~~~~ 573 (615)
T 1pgu_A 531 -TSKINAISWKPAEKGANEEEIEEDLVATGSL------------------DT---NIFIYSVKRP 573 (615)
T ss_dssp -SSCEEEEEECCCC------CCSCCEEEEEET------------------TS---CEEEEESSCT
T ss_pred -CCceeEEEEcCccccccccccCCCEEEEEcC------------------CC---cEEEEECCCC
Confidence 112 244999 9998876641 11 3888888876
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=95.16 E-value=0.35 Score=43.27 Aligned_cols=41 Identities=20% Similarity=0.207 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC
Q 011049 323 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 323 ~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~ 365 (494)
...+++...++.+.++. ...++.++|||+||.+|..++...
T Consensus 117 ~l~~~~~~~l~~~~~~~--p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 117 EVQNELVATVLDQFKQY--PSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred HHHHHHHHHHHHHHHHC--CCceEEEEeeCHHHHHHHHHHHHH
Confidence 34556666666555442 135799999999999998887654
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=95.16 E-value=0.57 Score=41.44 Aligned_cols=143 Identities=8% Similarity=-0.050 Sum_probs=75.8
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
|.|..+|+ ++++..+-. .+.....---+++|+.|+...++ .+.++++|+++. +.+...+... .
T Consensus 75 g~v~~iD~---~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~---~~~v~V~D~~Tl----~~~~ti~~~~------e 137 (268)
T 3nok_A 75 GTLRQLSL---ESAQPVWME-RLGNIFAEGLASDGERLYQLTWT---EGLLFTWSGMPP----QRERTTRYSG------E 137 (268)
T ss_dssp TEEEECCS---SCSSCSEEE-ECTTCCEEEEEECSSCEEEEESS---SCEEEEEETTTT----EEEEEEECSS------C
T ss_pred CEEEEEEC---CCCcEEeEE-CCCCcceeEEEEeCCEEEEEEcc---CCEEEEEECCcC----cEEEEEeCCC------c
Confidence 34777777 666654433 32222222356788888776554 468999999866 3333322211 1
Q ss_pred CceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccccc
Q 011049 98 PMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDIN 177 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s 177 (494)
. ...++||++++.+. | ...|+.+|.++.+...-....... ... ..-++..+.
T Consensus 138 G-wGLt~Dg~~L~vSd---------------G------s~~l~~iDp~T~~v~~~I~V~~~g---~~v---~~lNeLe~~ 189 (268)
T 3nok_A 138 G-WGLCYWNGKLVRSD---------------G------GTMLTFHEPDGFALVGAVQVKLRG---QPV---ELINELECA 189 (268)
T ss_dssp C-CCEEEETTEEEEEC---------------S------SSEEEEECTTTCCEEEEEECEETT---EEC---CCEEEEEEE
T ss_pred e-eEEecCCCEEEEEC---------------C------CCEEEEEcCCCCeEEEEEEeCCCC---ccc---ccccccEEe
Confidence 1 11578888665532 1 124899999998765433321110 000 000111232
Q ss_pred ccCcEEEEEEecCCCCCeEEEEEcCCCceeEee
Q 011049 178 LNQLKILTSKESKTEITQYHILSWPLKKSSQIT 210 (494)
Q Consensus 178 ~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt 210 (494)
+| ++++... ...+|.++|+++++.....
T Consensus 190 -dG-~lyanvw---~s~~I~vIDp~TG~V~~~I 217 (268)
T 3nok_A 190 -NG-VIYANIW---HSSDVLEIDPATGTVVGVI 217 (268)
T ss_dssp -TT-EEEEEET---TCSEEEEECTTTCBEEEEE
T ss_pred -CC-EEEEEEC---CCCeEEEEeCCCCcEEEEE
Confidence 44 5554432 2358999999988765443
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=95.14 E-value=0.17 Score=52.38 Aligned_cols=154 Identities=6% Similarity=-0.116 Sum_probs=80.5
Q ss_pred CCCCCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCC--CCceEeeeccc
Q 011049 11 NVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKD--VAPRVLFDRVF 88 (494)
Q Consensus 11 ~~~~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~--~~~~~lt~~~~ 88 (494)
...+..+..|+.+++ ++.+.+.+.........++|.++++.|+++-. ....|+++++++.. .....+....
T Consensus 379 ~ll~~~~~~I~~id~---~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~---~~~~I~~~~~~g~~~~~~~~~~i~~~- 451 (699)
T 1n7d_A 379 YLFFTNRHEVRKMTL---DRSEYTSLIPNLRNVVALDTEVASNRIYWSDL---SQRMICSTQLDRAHGVSSYDTVISRD- 451 (699)
T ss_dssp CBCCCCTTC-CEECT---TSCCEECCSCCCTTCCCCEEETTTTEEEECCT---TTTSBEEEESCCCCC-CCCCCBCCSC-
T ss_pred eEEecCccceEEEeC---CCCcceeeeccCcceEEEccccccCeEEEEec---CCCeEEEEecCCCCCCcceEEEEeCC-
Confidence 334555667888888 66655555444344557899998888777532 24579999988620 0111111110
Q ss_pred ccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeec
Q 011049 89 ENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALV 168 (494)
Q Consensus 89 ~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~ 168 (494)
...|.... +.+.+.+|++.- .....|.+++++++..+.+......
T Consensus 452 ---~~~P~gla--vD~~~g~LY~tD--------------------~~~~~I~v~d~dg~~~~~l~~~~~~---------- 496 (699)
T 1n7d_A 452 ---IQAPDGLA--VDWIHSNIYWTD--------------------SVLGTVSVADTKGVKRKTLFREQGS---------- 496 (699)
T ss_dssp ---C--CCCEE--CCCSSSBCEECC--------------------TTTSCEEEEBSSSCCEEEECCCSSC----------
T ss_pred ---CCCcceEE--EEeeCCcEEEEe--------------------ccCCeEEEEecCCCceEEEEeCCCC----------
Confidence 00112222 344455555432 1122488888887655544332111
Q ss_pred cCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEe
Q 011049 169 FGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQI 209 (494)
Q Consensus 169 s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~l 209 (494)
.. ....++|+++.|+++.. ...+.|+++++++...+.+
T Consensus 497 ~P-~giavDp~~g~ly~td~--~~~~~I~~~~~dG~~~~~l 534 (699)
T 1n7d_A 497 KP-RAIVVDPVHGFMYWTDW--GTPAKIKKGGLNGVDIYSL 534 (699)
T ss_dssp CC-CCEECCSSSSCCEECCC--SSSCCEEBCCSSSCCCCEE
T ss_pred Cc-ceEEEccCCCcEEEccc--CCCCeEEEEeCCCCCeeEE
Confidence 00 12356676777766542 2236788888776554444
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=95.11 E-value=0.3 Score=49.00 Aligned_cols=117 Identities=10% Similarity=-0.015 Sum_probs=69.3
Q ss_pred ccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEE
Q 011049 44 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYI 123 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~ 123 (494)
..+.|+.|...++|++..+ .+.|+++|++++ +.. ..-.... .|. .+.+||||++++... .
T Consensus 157 ~~~~~~~d~~~~~~V~~~~--~~~V~viD~~t~--~v~--~~i~~g~---~p~--~v~~SpDGr~lyv~~-~-------- 216 (567)
T 1qks_A 157 TQQMNDWDLENLFSVTLRD--AGQIALIDGSTY--EIK--TVLDTGY---AVH--ISRLSASGRYLFVIG-R-------- 216 (567)
T ss_dssp SSCCSCCCGGGEEEEEETT--TTEEEEEETTTC--CEE--EEEECSS---CEE--EEEECTTSCEEEEEE-T--------
T ss_pred cccccccCCCceEEEEeCC--CCeEEEEECCCC--eEE--EEEeCCC---Ccc--ceEECCCCCEEEEEc-C--------
Confidence 3577999977777877653 468999999876 322 2211111 011 233899999876543 1
Q ss_pred EEccCCCCCCCCCCceEeeecC--CCceEE-EEeeCcchhhhheeeeccCCCccccc----ccCcEEEEEEecCCCCCeE
Q 011049 124 LLNGRGFTPEGNIPFLDLFDIN--TGSKER-IWESNREKYFETAVALVFGQGEEDIN----LNQLKILTSKESKTEITQY 196 (494)
Q Consensus 124 ~~~~~g~~~~~~~~~l~~~d~~--~g~~~~-l~~~~~~~~~~~~~~~~s~~~~~~~s----~d~~~~~~~~~s~~~p~~l 196 (494)
.+ .+.++|+. +++... +-...+ . ....+| |||+++++.... +..+
T Consensus 217 ---------dg---~V~viD~~~~t~~~v~~i~~G~~------P-------~~ia~s~~~~pDGk~l~v~n~~---~~~v 268 (567)
T 1qks_A 217 ---------DG---KVNMIDLWMKEPTTVAEIKIGSE------A-------RSIETSKMEGWEDKYAIAGAYW---PPQY 268 (567)
T ss_dssp ---------TS---EEEEEETTSSSCCEEEEEECCSE------E-------EEEEECCSTTCTTTEEEEEEEE---TTEE
T ss_pred ---------CC---eEEEEECCCCCCcEeEEEecCCC------C-------ceeEEccccCCCCCEEEEEEcc---CCeE
Confidence 11 38888985 554322 211111 1 123678 699888776553 5678
Q ss_pred EEEEcCCCceeE
Q 011049 197 HILSWPLKKSSQ 208 (494)
Q Consensus 197 ~~~~~~~~~~~~ 208 (494)
.++|..+.+...
T Consensus 269 ~ViD~~t~~~~~ 280 (567)
T 1qks_A 269 VIMDGETLEPKK 280 (567)
T ss_dssp EEEETTTCCEEE
T ss_pred EEEECCCCcEEE
Confidence 888877665443
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=95.05 E-value=0.25 Score=43.98 Aligned_cols=115 Identities=8% Similarity=-0.039 Sum_probs=65.6
Q ss_pred ccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEE
Q 011049 44 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYI 123 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~ 123 (494)
.+..|+||| .|+.++...+ .+.|.++|+.++ +...-..-. . .......+++|++|+....
T Consensus 24 ~Gl~~~~dg-~Lyvstg~~~-~s~v~~iD~~tg--~v~~~i~l~--~-----~~fgeGi~~~g~~lyv~t~--------- 83 (266)
T 2iwa_A 24 QGLVYAEND-TLFESTGLYG-RSSVRQVALQTG--KVENIHKMD--D-----SYFGEGLTLLNEKLYQVVW--------- 83 (266)
T ss_dssp EEEEECSTT-EEEEEECSTT-TCEEEEEETTTC--CEEEEEECC--T-----TCCEEEEEEETTEEEEEET---------
T ss_pred ccEEEeCCC-eEEEECCCCC-CCEEEEEECCCC--CEEEEEecC--C-----CcceEEEEEeCCEEEEEEe---------
Confidence 578899996 4444332223 578999999987 433322211 1 1111124566776655531
Q ss_pred EEccCCCCCCCCCCceEeeecCCCceEEEEeeC-cchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcC
Q 011049 124 LLNGRGFTPEGNIPFLDLFDINTGSKERIWESN-REKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 202 (494)
Q Consensus 124 ~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~-~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~ 202 (494)
.. ..++++|.++++...-.... +. ...+++||++++++. . ...++.+|.+
T Consensus 84 ---------~~--~~v~viD~~t~~v~~~i~~g~~~--------------g~glt~Dg~~l~vs~-g---s~~l~viD~~ 134 (266)
T 2iwa_A 84 ---------LK--NIGFIYDRRTLSNIKNFTHQMKD--------------GWGLATDGKILYGSD-G---TSILYEIDPH 134 (266)
T ss_dssp ---------TC--SEEEEEETTTTEEEEEEECCSSS--------------CCEEEECSSSEEEEC-S---SSEEEEECTT
T ss_pred ---------cC--CEEEEEECCCCcEEEEEECCCCC--------------eEEEEECCCEEEEEC-C---CCeEEEEECC
Confidence 11 24899999987654332211 11 124677888877643 2 4589999988
Q ss_pred CCcee
Q 011049 203 LKKSS 207 (494)
Q Consensus 203 ~~~~~ 207 (494)
+.+..
T Consensus 135 t~~v~ 139 (266)
T 2iwa_A 135 TFKLI 139 (266)
T ss_dssp TCCEE
T ss_pred CCcEE
Confidence 76543
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.04 E-value=0.34 Score=48.16 Aligned_cols=61 Identities=8% Similarity=-0.036 Sum_probs=34.6
Q ss_pred CCCCCCCCCccceeeeccCCCCCCCCCeecccccc-----ccccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 7 RGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL-----RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 7 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lt~~~~-----~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
.|+.-...+..|.+.+++. ++ ....++ ... .....+|||||+.|+..+. .+.|-+.++.++
T Consensus 96 dG~~LAs~s~dg~V~iwd~---~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~----DGtVkIWd~~~~ 161 (588)
T 2j04_A 96 IDDWMAVLSNNGNVSVFKD---NK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNE----DGELQFFSIRKN 161 (588)
T ss_dssp SSSCEEEEETTSCEEEEET---TE-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEET----TSEEEEEECCCC
T ss_pred CCCEEEEEeCCCcEEEEeC---Cc-eeeecc-CCCccccccEEEEEEcCCCCEEEEEcC----CCEEEEEECCCC
Confidence 3333334455666777765 32 222222 221 2456899999999887653 345666666655
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=95.04 E-value=0.088 Score=49.02 Aligned_cols=81 Identities=6% Similarity=-0.105 Sum_probs=43.2
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
.+.|.+++. .+.....+..........+|||||+.|+-.+. ...|.+.++.... ...........
T Consensus 193 d~~i~iwd~---~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~----dg~v~iwd~~~~~-~~~~~~~~~~~------- 257 (343)
T 2xzm_R 193 DGRLKVWNT---NFQIRYTFKAHESNVNHLSISPNGKYIATGGK----DKKLLIWDILNLT-YPQREFDAGST------- 257 (343)
T ss_dssp TSEEEEEET---TTEEEEEEECCSSCEEEEEECTTSSEEEEEET----TCEEEEEESSCCS-SCSEEEECSSC-------
T ss_pred CCEEEEEcC---CCceeEEEcCccccceEEEECCCCCEEEEEcC----CCeEEEEECCCCc-ccceeecCCCc-------
Confidence 456777775 33222233334445567889999998876542 3456666763321 22222211111
Q ss_pred CCceeeCCCCCEEEEE
Q 011049 97 SPMMTRTSTGTNVIAK 112 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~ 112 (494)
--.+.|+||++.++..
T Consensus 258 v~~v~~sp~~~~la~~ 273 (343)
T 2xzm_R 258 INQIAFNPKLQWVAVG 273 (343)
T ss_dssp EEEEEECSSSCEEEEE
T ss_pred EEEEEECCCCCEEEEE
Confidence 0123489999876543
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=94.99 E-value=0.49 Score=45.30 Aligned_cols=122 Identities=8% Similarity=-0.071 Sum_probs=64.1
Q ss_pred ceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEE
Q 011049 46 VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILL 125 (494)
Q Consensus 46 p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~ 125 (494)
++|+|||+.|+... ..+ ...||+++.+++. ..+.+..... .....|.... ++|++.+|++..
T Consensus 176 ia~~~~g~~l~~~d-~~~-~~~I~~~d~~~~~-~~~~~g~~~~-~~~~~p~~ia--v~p~~g~lyv~d------------ 237 (409)
T 3hrp_A 176 PAVTKDKQRVYSIG-WEG-THTVYVYMKASGW-APTRIGQLGS-TFSGKIGAVA--LDETEEWLYFVD------------ 237 (409)
T ss_dssp CEECTTSSEEEEEB-SST-TCEEEEEEGGGTT-CEEEEEECCT-TSCSCCCBCE--ECTTSSEEEEEC------------
T ss_pred eeEecCCCcEEEEe-cCC-CceEEEEEcCCCc-eeEEeeeccc-hhcCCcEEEE--EeCCCCeEEEEE------------
Confidence 89999999766553 322 2389999988652 2233311111 0111223333 789666676631
Q ss_pred ccCCCCCCCCCCceEeeecCCCceEEEEee--CcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 126 NGRGFTPEGNIPFLDLFDINTGSKERIWES--NREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 126 ~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~--~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
. ...|+++|++++..+.+-.. .+.. .. .+.....++|+++.++++... ...|++++.++
T Consensus 238 -------~--~~~I~~~d~~~~~~~~~~~~~~~g~~---~~----~P~~~ia~~p~~g~lyv~d~~---~~~I~~~~~~g 298 (409)
T 3hrp_A 238 -------S--NKNFGRFNVKTQEVTLIKQLELSGSL---GT----NPGPYLIYYFVDSNFYMSDQN---LSSVYKITPDG 298 (409)
T ss_dssp -------T--TCEEEEEETTTCCEEEEEECCCCSCC---CC----SSCCEEEEETTTTEEEEEETT---TTEEEEECTTC
T ss_pred -------C--CCcEEEEECCCCCEEEEecccccCCC---CC----CccccEEEeCCCCEEEEEeCC---CCEEEEEecCC
Confidence 1 11488999988764433111 1100 00 000133677866677665432 34788888665
Q ss_pred C
Q 011049 204 K 204 (494)
Q Consensus 204 ~ 204 (494)
.
T Consensus 299 ~ 299 (409)
T 3hrp_A 299 E 299 (409)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=94.91 E-value=0.099 Score=49.02 Aligned_cols=83 Identities=8% Similarity=-0.031 Sum_probs=49.1
Q ss_pred ccceeeeccCCCCCCCC-----------------CeeccccccccccceecCCCceEEEEeeeeccceE-EEEEcCCCCC
Q 011049 16 PRDIIYTQPAEPAEGEK-----------------PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTR-TWLVCPGSKD 77 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~-----------------~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~-~~~~~~~~g~ 77 (494)
..+.|.++|+ ..++ ...+..........+|||||+.|+-.+. ... +.+-++..+
T Consensus 157 ~~g~v~iwd~---~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~----d~~~v~iwd~~~~- 228 (355)
T 3vu4_A 157 NLGQIHITKL---QSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQ----DGTIIRVFKTEDG- 228 (355)
T ss_dssp CTTCEEEEEC---CC------------------CCEEECCCSSCEEEEEECTTSSEEEEEET----TCSEEEEEETTTC-
T ss_pred cCcEEEEEEC---CCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeC----CCCEEEEEECCCC-
Confidence 4567888888 4433 3445555556667899999998775542 233 666677765
Q ss_pred CCceEeeecccccccCCCCCC--ceeeCCCCCEEEEEE
Q 011049 78 VAPRVLFDRVFENVYSDPGSP--MMTRTSTGTNVIAKI 113 (494)
Q Consensus 78 ~~~~~lt~~~~~~~~~~~~~~--~~~~spDG~~i~~~~ 113 (494)
+....... +.. ..+ .+.|||||+.++..+
T Consensus 229 -~~~~~~~~-g~h-----~~~v~~~~~s~~~~~l~s~s 259 (355)
T 3vu4_A 229 -VLVREFRR-GLD-----RADVVDMKWSTDGSKLAVVS 259 (355)
T ss_dssp -CEEEEEEC-TTC-----CSCEEEEEECTTSCEEEEEE
T ss_pred -cEEEEEEc-CCC-----CCcEEEEEECCCCCEEEEEE
Confidence 33332221 101 122 244999999887765
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=94.91 E-value=0.83 Score=43.81 Aligned_cols=132 Identities=11% Similarity=0.058 Sum_probs=72.1
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecc-----cccccCCCCC-CceeeCCCCCEEEEEEeccCc
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV-----FENVYSDPGS-PMMTRTSTGTNVIAKIKKEND 118 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~-----~~~~~~~~~~-~~~~~spDG~~i~~~~~~~~~ 118 (494)
.+.++|||+.++|.+. ...++++++.++ ..+.+.... .......|.. ..+.++|||++++......
T Consensus 269 ~~~~~~dg~~~~~~s~----~g~V~ViD~~~~--~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~-- 340 (426)
T 3c75_H 269 HPAFSLRSGRLVWPTY----TGKIFQADLTAE--GATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQR-- 340 (426)
T ss_dssp CCEECTTTCEEEEEBT----TSEEEEEEECSS--CEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEEC--
T ss_pred EeeecCCCCEEEEEeC----CCcEEEEeccCC--ceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEeccc--
Confidence 3567999999998863 347999998765 333222111 0000000111 1123788888776654210
Q ss_pred cceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEE
Q 011049 119 EQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHI 198 (494)
Q Consensus 119 ~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~ 198 (494)
..|.. ......+.++|.++++...-+..... . ....|++|++.++|+... ....+.+
T Consensus 341 --------~~gth-k~~s~~VsVID~~T~kvv~~I~vg~~-----P-------~gia~spDg~~~lyv~n~--~s~~VsV 397 (426)
T 3c75_H 341 --------DEWKH-KAASRFVVVLNAETGERINKIELGHE-----I-------DSINVSQDAEPLLYALSA--GTQTLHI 397 (426)
T ss_dssp --------CTTCT-TSCEEEEEEEETTTCCEEEEEEEEEE-----E-------CEEEECCSSSCEEEEEET--TTTEEEE
T ss_pred --------ccccc-cCCCCEEEEEECCCCeEEEEEECCCC-----c-------CeEEEccCCCEEEEEEcC--CCCeEEE
Confidence 00111 01123599999999886654432211 1 123789999834444332 2467999
Q ss_pred EEcCCCcee
Q 011049 199 LSWPLKKSS 207 (494)
Q Consensus 199 ~~~~~~~~~ 207 (494)
+|..+.+..
T Consensus 398 ID~~t~kvv 406 (426)
T 3c75_H 398 YDAATGEEL 406 (426)
T ss_dssp EETTTCCEE
T ss_pred EECCCCCEE
Confidence 998887654
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=94.90 E-value=0.45 Score=43.23 Aligned_cols=120 Identities=13% Similarity=0.133 Sum_probs=66.6
Q ss_pred eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCC--ceeeCCCCCEEEEE
Q 011049 35 ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP--MMTRTSTGTNVIAK 112 (494)
Q Consensus 35 ~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~--~~~~spDG~~i~~~ 112 (494)
.+..........+|||||+.|+-.+ . ...+.+-++.++ ....... .. ..+ ...|+|||+.|+..
T Consensus 8 ~~~~h~~~V~~~~fsp~~~~l~s~~-~---dg~v~lWd~~~~--~~~~~~~--~~------~~~v~~~~~~~~~~~l~s~ 73 (304)
T 2ynn_A 8 TFSNRSDRVKGIDFHPTEPWVLTTL-Y---SGRVELWNYETQ--VEVRSIQ--VT------ETPVRAGKFIARKNWIIVG 73 (304)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEEE-T---TSEEEEEETTTT--EEEEEEE--CC------SSCEEEEEEEGGGTEEEEE
T ss_pred eecCCCCceEEEEECCCCCEEEEEc-C---CCcEEEEECCCC--ceeEEee--cc------CCcEEEEEEeCCCCEEEEE
Confidence 3444455567889999999877654 2 234555666655 2222211 11 122 23489999987765
Q ss_pred EeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCC
Q 011049 113 IKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTE 192 (494)
Q Consensus 113 ~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~ 192 (494)
+. +. .+.++|+++++.......... .. ....|+|++..++ +.+.
T Consensus 74 s~-------------------d~--~i~vwd~~~~~~~~~~~~h~~----~v-------~~~~~~~~~~~l~-sgs~--- 117 (304)
T 2ynn_A 74 SD-------------------DF--RIRVFNYNTGEKVVDFEAHPD----YI-------RSIAVHPTKPYVL-SGSD--- 117 (304)
T ss_dssp ET-------------------TS--EEEEEETTTCCEEEEEECCSS----CE-------EEEEECSSSSEEE-EEET---
T ss_pred CC-------------------CC--EEEEEECCCCcEEEEEeCCCC----cE-------EEEEEcCCCCEEE-EECC---
Confidence 41 11 388889988875443332211 01 1236788887654 3322
Q ss_pred CCeEEEEEcCCC
Q 011049 193 ITQYHILSWPLK 204 (494)
Q Consensus 193 p~~l~~~~~~~~ 204 (494)
-..+.++++.++
T Consensus 118 D~~v~lWd~~~~ 129 (304)
T 2ynn_A 118 DLTVKLWNWENN 129 (304)
T ss_dssp TSCEEEEEGGGT
T ss_pred CCeEEEEECCCC
Confidence 245666776554
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=94.74 E-value=0.85 Score=42.48 Aligned_cols=142 Identities=10% Similarity=0.050 Sum_probs=75.9
Q ss_pred CccceeeeccCCCCCCCCCee-ccccccccccceecC--CCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccc
Q 011049 15 SPRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCD--DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV 91 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wsp--Dg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~ 91 (494)
+..+.|.++|+ +.++... +...........|+| +|+.|+-.+ . ...+.+.++..+ +..........
T Consensus 173 s~D~~v~lwd~---~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs-~---Dg~v~~wd~~~~--~~~~~~~~h~~-- 241 (354)
T 2pbi_B 173 SGDGTCALWDV---ESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGG-C---DKKAMVWDMRSG--QCVQAFETHES-- 241 (354)
T ss_dssp ETTSEEEEEET---TTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEE-T---TSCEEEEETTTC--CEEEEECCCSS--
T ss_pred eCCCcEEEEeC---CCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEe-C---CCeEEEEECCCC--cEEEEecCCCC--
Confidence 34567888888 6565443 332333334556776 567666543 2 345777777765 43333221111
Q ss_pred cCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCC
Q 011049 92 YSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQ 171 (494)
Q Consensus 92 ~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~ 171 (494)
.-..+.|+|||..++.... ++ .+.++|+.+++...++...... ...
T Consensus 242 ----~v~~v~~~p~~~~l~s~s~------------------D~---~v~lwd~~~~~~~~~~~~~~~~---------~~~ 287 (354)
T 2pbi_B 242 ----DVNSVRYYPSGDAFASGSD------------------DA---TCRLYDLRADREVAIYSKESII---------FGA 287 (354)
T ss_dssp ----CEEEEEECTTSSEEEEEET------------------TS---CEEEEETTTTEEEEEECCTTCC---------SCE
T ss_pred ----CeEEEEEeCCCCEEEEEeC------------------CC---eEEEEECCCCcEEEEEcCCCcc---------cce
Confidence 0112448999997765541 11 2778888876544444322110 000
Q ss_pred CcccccccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 172 GEEDINLNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 172 ~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
....|+|++..++.... -..+.++++.+++
T Consensus 288 ~~~~~s~~g~~l~~g~~----d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 288 SSVDFSLSGRLLFAGYN----DYTINVWDVLKGS 317 (354)
T ss_dssp EEEEECTTSSEEEEEET----TSCEEEEETTTCS
T ss_pred eEEEEeCCCCEEEEEEC----CCcEEEEECCCCc
Confidence 12478888876654332 2457777776554
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.72 E-value=0.34 Score=44.86 Aligned_cols=101 Identities=9% Similarity=0.039 Sum_probs=60.6
Q ss_pred CccceeeeccCCCCCC-CCC--eeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccc
Q 011049 15 SPRDIIYTQPAEPAEG-EKP--EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV 91 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~-~~~--~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~ 91 (494)
+..+.|.++++ +. +.. ..+..........+|+|||+.|+..+. ...|.+.++.++ +...+.......
T Consensus 61 ~~dg~i~iw~~---~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~----dg~v~iwd~~~~--~~~~~~~~~~~v- 130 (368)
T 3mmy_A 61 SWANDVRCWEV---QDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC----DKTAKMWDLSSN--QAIQIAQHDAPV- 130 (368)
T ss_dssp ETTSEEEEEEE---CTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEET----TSEEEEEETTTT--EEEEEEECSSCE-
T ss_pred CCCCcEEEEEc---CCCCceeEEEeccccCCEEEEEECcCCCEEEEEcC----CCcEEEEEcCCC--CceeeccccCce-
Confidence 34567888888 43 333 334444556677899999998886542 346777788766 444443322111
Q ss_pred cCCCCCCceee--CCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEE
Q 011049 92 YSDPGSPMMTR--TSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI 152 (494)
Q Consensus 92 ~~~~~~~~~~~--spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l 152 (494)
. .+.| +|||+.++.... ++ .+.++|+.+++....
T Consensus 131 ----~--~~~~~~~~~~~~l~~~~~------------------dg---~i~vwd~~~~~~~~~ 166 (368)
T 3mmy_A 131 ----K--TIHWIKAPNYSCVMTGSW------------------DK---TLKFWDTRSSNPMMV 166 (368)
T ss_dssp ----E--EEEEEECSSCEEEEEEET------------------TS---EEEEECSSCSSCSEE
T ss_pred ----E--EEEEEeCCCCCEEEEccC------------------CC---cEEEEECCCCcEEEE
Confidence 1 2337 899987766541 11 377788877664443
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=94.69 E-value=0.52 Score=42.76 Aligned_cols=85 Identities=8% Similarity=-0.067 Sum_probs=49.2
Q ss_pred CCccceeeeccCCCCCCCCCe-eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccccc
Q 011049 14 VSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~-~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~ 92 (494)
-+..+.|.++++ +.++.. .+..........+|+|||+.|+-.+. ...|.+.++.++ +..........
T Consensus 31 ~~~dg~v~lWd~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~----d~~i~vwd~~~~--~~~~~~~~h~~--- 98 (304)
T 2ynn_A 31 TLYSGRVELWNY---ETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD----DFRIRVFNYNTG--EKVVDFEAHPD--- 98 (304)
T ss_dssp EETTSEEEEEET---TTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET----TSEEEEEETTTC--CEEEEEECCSS---
T ss_pred EcCCCcEEEEEC---CCCceeEEeeccCCcEEEEEEeCCCCEEEEECC----CCEEEEEECCCC--cEEEEEeCCCC---
Confidence 345678888888 545433 33333334456789999998876542 345777777766 43332221111
Q ss_pred CCCCCCceeeCCCCCEEEEEE
Q 011049 93 SDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 93 ~~~~~~~~~~spDG~~i~~~~ 113 (494)
.-..+.|+||++.++-.+
T Consensus 99 ---~v~~~~~~~~~~~l~sgs 116 (304)
T 2ynn_A 99 ---YIRSIAVHPTKPYVLSGS 116 (304)
T ss_dssp ---CEEEEEECSSSSEEEEEE
T ss_pred ---cEEEEEEcCCCCEEEEEC
Confidence 011244899999776543
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=94.64 E-value=0.28 Score=44.28 Aligned_cols=136 Identities=12% Similarity=0.030 Sum_probs=73.1
Q ss_pred CccceeeeccCCCCCCCCCeeccc-cccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHK-LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~-~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
+..+.|.++|. . .....+.. ........+|+|||+ |+..+ ....|.+.++..+ +..........
T Consensus 162 ~~d~~i~i~d~---~-~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~----~dg~i~i~d~~~~--~~~~~~~~~~~---- 226 (313)
T 3odt_A 162 SADKTIKLWQN---D-KVIKTFSGIHNDVVRHLAVVDDGH-FISCS----NDGLIKLVDMHTG--DVLRTYEGHES---- 226 (313)
T ss_dssp ETTSCEEEEET---T-EEEEEECSSCSSCEEEEEEEETTE-EEEEE----TTSEEEEEETTTC--CEEEEEECCSS----
T ss_pred ECCCCEEEEec---C-ceEEEEeccCcccEEEEEEcCCCe-EEEcc----CCCeEEEEECCch--hhhhhhhcCCc----
Confidence 33456777775 2 22222332 444556788999998 44332 2457888888865 43333321111
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCc
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 173 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~ 173 (494)
.-..+.|+|||+ ++.... ++ .+.++|+.+++.......... .. ..
T Consensus 227 --~i~~~~~~~~~~-l~~~~~------------------dg---~v~iwd~~~~~~~~~~~~~~~----~i-------~~ 271 (313)
T 3odt_A 227 --FVYCIKLLPNGD-IVSCGE------------------DR---TVRIWSKENGSLKQVITLPAI----SI-------WS 271 (313)
T ss_dssp --CEEEEEECTTSC-EEEEET------------------TS---EEEEECTTTCCEEEEEECSSS----CE-------EE
T ss_pred --eEEEEEEecCCC-EEEEec------------------CC---EEEEEECCCCceeEEEeccCc----eE-------EE
Confidence 011244899994 544321 11 388889888875554433221 01 12
Q ss_pred ccccccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 174 EDINLNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 174 ~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
..|++++. ++. ... -..+.++++.+++
T Consensus 272 ~~~~~~~~-~~~-~~~---dg~i~iw~~~~~~ 298 (313)
T 3odt_A 272 VDCMSNGD-IIV-GSS---DNLVRIFSQEKSR 298 (313)
T ss_dssp EEECTTSC-EEE-EET---TSCEEEEESCGGG
T ss_pred EEEccCCC-EEE-EeC---CCcEEEEeCCCCc
Confidence 37788887 333 222 3467777776554
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=94.63 E-value=2.6 Score=38.47 Aligned_cols=123 Identities=6% Similarity=-0.130 Sum_probs=69.3
Q ss_pred ccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEE
Q 011049 44 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYI 123 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~ 123 (494)
.+.++.++++.|+++-. ....|.++++++. ..+.+...... .|.... ..|++.+|++....
T Consensus 80 ~glavd~~~~~ly~~d~---~~~~I~~~~~~g~--~~~~~~~~~~~----~P~~ia--vdp~~g~ly~~d~~-------- 140 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDS---VLGTVSVADTKGV--KRKTLFRENGS----KPRAIV--VDPVHGFMYWTDWG-------- 140 (316)
T ss_dssp CEEEEETTTTEEEEEET---TTTEEEEEETTSS--SEEEEEECTTC----CEEEEE--EETTTTEEEEEECS--------
T ss_pred CEEEEeecCCeEEEEEC---CCCEEEEEeCCCC--ceEEEEECCCC----CcceEE--eCCCCCEEEEEccC--------
Confidence 35567777777766532 2468999999875 44555432111 122222 57877777776421
Q ss_pred EEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 124 LLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 124 ~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
....|+++++++...+.+...... .+ ....++++++++++.... ...|++++.++
T Consensus 141 -----------~~~~I~~~~~dG~~~~~~~~~~~~----~P-------~gla~d~~~~~lY~~D~~---~~~I~~~d~dg 195 (316)
T 1ijq_A 141 -----------TPAKIKKGGLNGVDIYSLVTENIQ----WP-------NGITLDLLSGRLYWVDSK---LHSISSIDVNG 195 (316)
T ss_dssp -----------SSCEEEEEETTSCCEEEEECSSCS----CE-------EEEEEETTTTEEEEEETT---TTEEEEEETTS
T ss_pred -----------CCCeEEEEcCCCCCeEEEEECCCC----Cc-------eEEEEeccCCEEEEEECC---CCeEEEEecCC
Confidence 113588888876554443321110 01 123677777788776533 35789999887
Q ss_pred CceeEee
Q 011049 204 KKSSQIT 210 (494)
Q Consensus 204 ~~~~~lt 210 (494)
...+.+.
T Consensus 196 ~~~~~~~ 202 (316)
T 1ijq_A 196 GNRKTIL 202 (316)
T ss_dssp CSCEEEE
T ss_pred CceEEEe
Confidence 6555554
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=94.56 E-value=0.052 Score=50.07 Aligned_cols=42 Identities=12% Similarity=0.001 Sum_probs=27.8
Q ss_pred CccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEe
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNET 59 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~ 59 (494)
+..+.|.++|+ ..++..............+|||||+.|+...
T Consensus 215 ~~dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~ 256 (319)
T 3frx_A 215 GKDGEIMLWNL---AAKKAMYTLSAQDEVFSLAFSPNRYWLAAAT 256 (319)
T ss_dssp ETTCEEEEEET---TTTEEEEEEECCSCEEEEEECSSSSEEEEEE
T ss_pred eCCCeEEEEEC---CCCcEEEEecCCCcEEEEEEcCCCCEEEEEc
Confidence 34568888888 5555443333334456788999999887653
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=94.55 E-value=0.79 Score=40.46 Aligned_cols=170 Identities=15% Similarity=0.047 Sum_probs=88.7
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
+.|..+|+ ++++..+-...+.....--.+++|+.|+...++ .+.++++|+++. +...-..-... +
T Consensus 65 S~v~~vD~---~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~---~~~v~v~D~~t~--~~~~ti~~~~e------G- 129 (262)
T 3nol_A 65 SSIRKVDI---ESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK---NGLGFVWNIRNL--RQVRSFNYDGE------G- 129 (262)
T ss_dssp EEEEEECT---TTCCEEEEEECCTTCCEEEEEEETTEEEEEESS---SSEEEEEETTTC--CEEEEEECSSC------C-
T ss_pred ceEEEEEC---CCCcEEEEEecCCccceeEEEEeCCEEEEEEee---CCEEEEEECccC--cEEEEEECCCC------c-
Confidence 36777887 767655433333333332356688888777654 458999999876 32222221111 1
Q ss_pred CceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEee--CcchhhhheeeeccCCCccc
Q 011049 98 PMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES--NREKYFETAVALVFGQGEED 175 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~--~~~~~~~~~~~~~s~~~~~~ 175 (494)
-- .++||++++.+. | ...|+.+|+++.+...-... .+.. ...+ ++..
T Consensus 130 ~g--lt~dg~~L~~Sd---------------G------s~~i~~iDp~T~~v~~~I~V~~~g~~-----~~~l---NELe 178 (262)
T 3nol_A 130 WG--LTHNDQYLIMSD---------------G------TPVLRFLDPESLTPVRTITVTAHGEE-----LPEL---NELE 178 (262)
T ss_dssp CC--EEECSSCEEECC---------------S------SSEEEEECTTTCSEEEEEECEETTEE-----CCCE---EEEE
T ss_pred eE--EecCCCEEEEEC---------------C------CCeEEEEcCCCCeEEEEEEeccCCcc-----cccc---ceeE
Confidence 11 578887665431 1 12489999998776543322 1110 0000 1123
Q ss_pred ccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCCCCcccccccEEEEEEcCCCceEEEEEEeCCC
Q 011049 176 INLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPG 246 (494)
Q Consensus 176 ~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~ 246 (494)
+. +| ++++... ....|.++|+++++.........-.+.... ....+..+.|.-|-|..
T Consensus 179 ~~-~G-~lyan~w---~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~--------~~~~~~vlNGIA~dp~~ 236 (262)
T 3nol_A 179 WV-DG-EIFANVW---QTNKIVRIDPETGKVTGIIDLNGILAEAGP--------LPSPIDVLNGIAWDKEH 236 (262)
T ss_dssp EE-TT-EEEEEET---TSSEEEEECTTTCBEEEEEECTTGGGGSCS--------CCSSCCCEEEEEEETTT
T ss_pred EE-CC-EEEEEEc---cCCeEEEEECCCCcEEEEEECCcCcccccc--------ccCcCCceEEEEEcCCC
Confidence 33 44 5554432 245899999999886554443221111100 01233457777777754
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=94.51 E-value=0.73 Score=40.97 Aligned_cols=143 Identities=12% Similarity=0.022 Sum_probs=75.2
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
.+.|..+|+ ++++..+-...+.......++++|+.|+...+. .+.++++|+++. +.+...+... .
T Consensus 43 ~s~v~~iD~---~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~---~~~v~viD~~t~----~v~~~i~~g~-----~ 107 (266)
T 2iwa_A 43 RSSVRQVAL---QTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL---KNIGFIYDRRTL----SNIKNFTHQM-----K 107 (266)
T ss_dssp TCEEEEEET---TTCCEEEEEECCTTCCEEEEEEETTEEEEEETT---CSEEEEEETTTT----EEEEEEECCS-----S
T ss_pred CCEEEEEEC---CCCCEEEEEecCCCcceEEEEEeCCEEEEEEec---CCEEEEEECCCC----cEEEEEECCC-----C
Confidence 356777777 666655433222222333466678887776543 458999999865 2332222110 1
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeC--cchhhhheeeeccCCCcc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESN--REKYFETAVALVFGQGEE 174 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~--~~~~~~~~~~~~s~~~~~ 174 (494)
.. +..++||++++... | ...|.++|.++.+........ +.. . ..-++.
T Consensus 108 ~g-~glt~Dg~~l~vs~---------------g------s~~l~viD~~t~~v~~~I~Vg~~~~p-----~---~~~nel 157 (266)
T 2iwa_A 108 DG-WGLATDGKILYGSD---------------G------TSILYEIDPHTFKLIKKHNVKYNGHR-----V---IRLNEL 157 (266)
T ss_dssp SC-CEEEECSSSEEEEC---------------S------SSEEEEECTTTCCEEEEEECEETTEE-----C---CCEEEE
T ss_pred Ce-EEEEECCCEEEEEC---------------C------CCeEEEEECCCCcEEEEEEECCCCcc-----c---ccceeE
Confidence 11 11588998776431 1 124899999887654433221 110 0 000111
Q ss_pred cccccCcEEEEEEecCCCCCeEEEEEcCCCceeEe
Q 011049 175 DINLNQLKILTSKESKTEITQYHILSWPLKKSSQI 209 (494)
Q Consensus 175 ~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~l 209 (494)
.+. ++ .++.... ...+|.++|+++++....
T Consensus 158 e~~-dg-~lyvn~~---~~~~V~vID~~tg~V~~~ 187 (266)
T 2iwa_A 158 EYI-NG-EVWANIW---QTDCIARISAKDGTLLGW 187 (266)
T ss_dssp EEE-TT-EEEEEET---TSSEEEEEETTTCCEEEE
T ss_pred EEE-CC-EEEEecC---CCCeEEEEECCCCcEEEE
Confidence 333 44 5554332 245899999988875443
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=94.49 E-value=0.45 Score=45.88 Aligned_cols=142 Identities=6% Similarity=-0.050 Sum_probs=73.1
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeec-cceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT-SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~-~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
+.|+.+++ +++..+.+......-..++|++||+.|+++...++ ....+++++.++.-...+.+.. +..|.
T Consensus 159 ~~I~~id~---~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~------~~~p~ 229 (430)
T 3tc9_A 159 HPTRLIDF---EKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELTK------GQNCN 229 (430)
T ss_dssp EEEEEEET---TTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEE------CSSCC
T ss_pred CcEEEEEC---CCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeecc------CCCce
Confidence 34555555 54444444433333446789999997666543222 1335666766654111122221 11223
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
... ++|++.+|++... ...+|++++++++....+...... ... ....+
T Consensus 230 gia--vdp~~g~lyv~d~--------------------~~~~V~~~~~~~~~~~~~~~~~~~---~~P-------~gia~ 277 (430)
T 3tc9_A 230 GAE--THPINGELYFNSW--------------------NAGQVFRYDFTTQETTPLFTIQDS---GWE-------FHIQF 277 (430)
T ss_dssp CEE--ECTTTCCEEEEET--------------------TTTEEEEEETTTTEEEEEEECSSS---SCC-------EEEEE
T ss_pred EEE--EeCCCCEEEEEEC--------------------CCCEEEEEECCCCcEEEEEEcCCC---Ccc-------eeEEE
Confidence 333 7884445666531 112489999988765444332211 001 12378
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
+|+|+++++.... ...|++++.++
T Consensus 278 ~pdG~~lyv~d~~---~~~I~~~~~d~ 301 (430)
T 3tc9_A 278 HPSGNYAYIVVVN---QHYILRSDYDW 301 (430)
T ss_dssp CTTSSEEEEEETT---TTEEEEEEEET
T ss_pred cCCCCEEEEEECC---CCEEEEEeCCc
Confidence 8899877765432 34677776553
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.47 E-value=2.7 Score=43.89 Aligned_cols=150 Identities=7% Similarity=-0.098 Sum_probs=81.7
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCC--CceEeeecccccccC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDV--APRVLFDRVFENVYS 93 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~--~~~~lt~~~~~~~~~ 93 (494)
.+..|..+++ ++...+.+.........++|.+.++.|+++-. ....|+++++++... ..+.+..... .
T Consensus 402 n~~~Ir~i~l---~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~---~~~~I~~~~l~g~~~~~~~~~vi~~~l----~ 471 (791)
T 3m0c_C 402 NRHEVRKMTL---DRSEYTSLIPNLRNVVALDTEVASNRIYWSDL---SQRMICSTQLDRAHGVSSYDTVISRDI----Q 471 (791)
T ss_dssp CBSSEEEECT---TSCCCEEEECSCSSEEEEEEETTTTEEEEEET---TTTEEEEEEC--------CEEEECSSC----S
T ss_pred cccceeEeec---cCCcceeeecCCCceEEEeecccCCeeEEeec---cceeEEEEeccCCCCCcceeEEEecCC----C
Confidence 3445666666 55555555554444456789887777776532 246799999886311 2233332111 1
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCc
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 173 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~ 173 (494)
.|.... ..+.+++|++.-. ....|.++++++...+.+...... .+. .
T Consensus 472 ~P~GLA--vD~~~~~LY~tD~--------------------~~~~I~v~~ldG~~~~~l~~~~l~----~P~-------g 518 (791)
T 3m0c_C 472 APDGLA--VDWIHSNIYWTDS--------------------VLGTVSVADTKGVKRKTLFRENGS----KPR-------A 518 (791)
T ss_dssp CCCEEE--EETTTTEEEEEET--------------------TTTEEEEEETTSSSEEEEEECTTC----CEE-------E
T ss_pred Ccceee--eeecCCcEEEEec--------------------CCCeEEEEeCCCCeEEEEEeCCCC----Ccc-------e
Confidence 122222 4566766766531 122488888887765555432211 111 1
Q ss_pred ccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEee
Q 011049 174 EDINLNQLKILTSKESKTEITQYHILSWPLKKSSQIT 210 (494)
Q Consensus 174 ~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt 210 (494)
..++|..+.|+++..+ ..+.|++.++++...+.+.
T Consensus 519 IaVDp~~g~LYwtD~g--~~~~I~~~~~dG~~~~~lv 553 (791)
T 3m0c_C 519 IVVDPVHGFMYWTDWG--TPAKIKKGGLNGVDIYSLV 553 (791)
T ss_dssp EEEETTTTEEEEEECS--SSCEEEEEETTSCCEEEEE
T ss_pred EEEecCCCCEEEecCC--CCCeEEEEecCCCceEEEE
Confidence 2556666777776533 3467999998877665554
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.45 E-value=2 Score=44.94 Aligned_cols=124 Identities=6% Similarity=-0.100 Sum_probs=70.7
Q ss_pred ccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEE
Q 011049 44 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYI 123 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~ 123 (494)
.+.+..+.++.|+++- .....|++++++|. ..+.|...... .|...+ ..|.+.+|+++-.
T Consensus 474 ~GLAvD~~~~~LY~tD---~~~~~I~v~~ldG~--~~~~l~~~~l~----~P~gIa--VDp~~g~LYwtD~--------- 533 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTD---SVLGTVSVADTKGV--KRKTLFRENGS----KPRAIV--VDPVHGFMYWTDW--------- 533 (791)
T ss_dssp CEEEEETTTTEEEEEE---TTTTEEEEEETTSS--SEEEEEECTTC----CEEEEE--EETTTTEEEEEEC---------
T ss_pred ceeeeeecCCcEEEEe---cCCCeEEEEeCCCC--eEEEEEeCCCC----CcceEE--EecCCCCEEEecC---------
Confidence 3566777777777653 22468999999976 44555432211 122222 5777777777642
Q ss_pred EEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 124 LLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 124 ~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
+....|.++++++...+.+....-. .+. ...+++++++|+++... ...|+++++++
T Consensus 534 ----------g~~~~I~~~~~dG~~~~~lv~~~l~----~P~-------GLavD~~~~~LYwaD~~---~~~I~~~d~dG 589 (791)
T 3m0c_C 534 ----------GTPAKIKKGGLNGVDIYSLVTENIQ----WPN-------GITLDLLSGRLYWVDSK---LHSISSIDVNG 589 (791)
T ss_dssp ----------SSSCEEEEEETTSCCEEEEECSSCS----CEE-------EEEEETTTTEEEEEETT---TTEEEEEETTS
T ss_pred ----------CCCCeEEEEecCCCceEEEEeCCCC----Cce-------EEEEecCCCeEEEEeCC---CCcEEEEecCC
Confidence 1123588888887665554432210 111 12556666777776432 35789999887
Q ss_pred CceeEeec
Q 011049 204 KKSSQITN 211 (494)
Q Consensus 204 ~~~~~lt~ 211 (494)
...+.+..
T Consensus 590 ~~~~~v~~ 597 (791)
T 3m0c_C 590 GNRKTILE 597 (791)
T ss_dssp CSCEEEEE
T ss_pred CceEEEec
Confidence 76665543
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=94.44 E-value=0.65 Score=44.42 Aligned_cols=81 Identities=12% Similarity=0.045 Sum_probs=50.3
Q ss_pred CccceeeeccCCCCCCCCCeecccc---ccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccc
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKL---DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV 91 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~---~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~ 91 (494)
...+.|+++|+ .+|+..++... .......+|||||+.|+..+. ...|.+.++.++ +.+....+.
T Consensus 122 gld~tV~lWd~---~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~----Dg~v~iWd~~~~----~~~~~~~~h-- 188 (420)
T 4gga_A 122 ALDNSVYLWSA---SSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS----SAEVQLWDVQQQ----KRLRNMTSH-- 188 (420)
T ss_dssp EETTEEEEEET---TTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET----TSCEEEEETTTT----EEEEEECCC--
T ss_pred EeCCEEEEEEC---CCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEEC----CCeEEEEEcCCC----cEEEEEeCC--
Confidence 34568999999 77877665432 234567899999998876542 345666677655 333333322
Q ss_pred cCCCCCCceeeCCCCCEEEEE
Q 011049 92 YSDPGSPMMTRTSTGTNVIAK 112 (494)
Q Consensus 92 ~~~~~~~~~~~spDG~~i~~~ 112 (494)
...+.++++|++.++..
T Consensus 189 ----~~~v~~~s~~~~~l~sg 205 (420)
T 4gga_A 189 ----SARVGSLSWNSYILSSG 205 (420)
T ss_dssp ----SSCEEEEEEETTEEEEE
T ss_pred ----CCceEEEeeCCCEEEEE
Confidence 33444567777765543
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=94.40 E-value=0.38 Score=49.69 Aligned_cols=81 Identities=9% Similarity=-0.121 Sum_probs=47.4
Q ss_pred ccceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
..+.|.++|+ ..++... +..........+|||||+.|+-.+. ...|.+.++..+ +.+.......
T Consensus 539 ~d~~v~vwd~---~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~----Dg~i~iwd~~~~----~~~~~~~~~~---- 603 (694)
T 3dm0_A 539 WDKTVKVWNL---SNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGK----DGVVLLWDLAEG----KKLYSLEANS---- 603 (694)
T ss_dssp TTSCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSSEEEEEET----TSBCEEEETTTT----EEEECCBCSS----
T ss_pred CCCeEEEEEC---CCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeC----CCeEEEEECCCC----ceEEEecCCC----
Confidence 3457788888 5554433 4344455667899999998776542 334666676655 3333322111
Q ss_pred CCCCceeeCCCCCEEEEE
Q 011049 95 PGSPMMTRTSTGTNVIAK 112 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~ 112 (494)
.-..++||||+..++..
T Consensus 604 -~v~~~~~sp~~~~l~~~ 620 (694)
T 3dm0_A 604 -VIHALCFSPNRYWLCAA 620 (694)
T ss_dssp -CEEEEEECSSSSEEEEE
T ss_pred -cEEEEEEcCCCcEEEEE
Confidence 11134599999877654
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=94.37 E-value=0.11 Score=57.76 Aligned_cols=141 Identities=9% Similarity=-0.028 Sum_probs=79.8
Q ss_pred CCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
.+..+.|.++++ .+++...+...........|+||++.++.. . ...+.+.++.++ +..........
T Consensus 1021 ~~~dg~i~vwd~---~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~--~---dg~v~vwd~~~~--~~~~~~~~~~~---- 1086 (1249)
T 3sfz_A 1021 SSEDSVIQVWNW---QTGDYVFLQAHQETVKDFRLLQDSRLLSWS--F---DGTVKVWNVITG--RIERDFTCHQG---- 1086 (1249)
T ss_dssp ECSSSBEEEEET---TTTEEECCBCCSSCEEEEEECSSSEEEEEE--S---SSEEEEEETTTT--CCCEEEECCSS----
T ss_pred EcCCCEEEEEEC---CCCceEEEecCCCcEEEEEEcCCCcEEEEE--C---CCcEEEEECCCC--ceeEEEcccCC----
Confidence 345568888888 666666666555566678899998744332 1 346888888876 43333322211
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCc
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 173 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~ 173 (494)
.-..+.|||||+.++.... ++ .+.++|+.+++.......... .. ..
T Consensus 1087 --~v~~~~~s~d~~~l~s~s~------------------d~---~v~iwd~~~~~~~~~l~~h~~----~v-------~~ 1132 (1249)
T 3sfz_A 1087 --TVLSCAISSDATKFSSTSA------------------DK---TAKIWSFDLLSPLHELKGHNG----CV-------RC 1132 (1249)
T ss_dssp --CCCCEEECSSSSSCEEECC------------------SS---CCCEECSSSSSCSBCCCCCSS----CE-------EE
T ss_pred --cEEEEEECCCCCEEEEEcC------------------CC---cEEEEECCCcceeeeeccCCC----cE-------EE
Confidence 1112348999998876541 11 266777776653222111100 00 12
Q ss_pred ccccccCcEEEEEEecCCCCCeEEEEEcCCCce
Q 011049 174 EDINLNQLKILTSKESKTEITQYHILSWPLKKS 206 (494)
Q Consensus 174 ~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~ 206 (494)
..|+||+..++.... -..+.++++.+++.
T Consensus 1133 ~~~s~dg~~lat~~~----dg~i~vwd~~~~~~ 1161 (1249)
T 3sfz_A 1133 SAFSLDGILLATGDD----NGEIRIWNVSDGQL 1161 (1249)
T ss_dssp EEECSSSSEEEEEET----TSCCCEEESSSSCC
T ss_pred EEECCCCCEEEEEeC----CCEEEEEECCCCce
Confidence 478999986665332 23466777766543
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=94.35 E-value=0.45 Score=45.77 Aligned_cols=86 Identities=8% Similarity=-0.015 Sum_probs=48.7
Q ss_pred CccceeeeccCCCCCCC---CCe-eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc
Q 011049 15 SPRDIIYTQPAEPAEGE---KPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN 90 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~---~~~-~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~ 90 (494)
+..+.|.++|+ ..+ ++. .+..........+|+|+|+.++++...+ ..|.+.++.........+......
T Consensus 251 ~~dg~i~i~d~---~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d---g~v~vwd~~~~~~~~~~~~~h~~~- 323 (430)
T 2xyi_A 251 ADDQKLMIWDT---RNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD---KTVALWDLRNLKLKLHSFESHKDE- 323 (430)
T ss_dssp ETTSEEEEEET---TCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT---SEEEEEETTCTTSCSEEEECCSSC-
T ss_pred eCCCeEEEEEC---CCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC---CeEEEEeCCCCCCCeEEeecCCCC-
Confidence 34578888888 433 222 2333344456788999999766665433 467777877532122222211111
Q ss_pred ccCCCCCCceeeCCCCCEEEEEE
Q 011049 91 VYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 91 ~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
--.+.|+|+|+.++...
T Consensus 324 ------v~~i~~sp~~~~~l~s~ 340 (430)
T 2xyi_A 324 ------IFQVQWSPHNETILASS 340 (430)
T ss_dssp ------EEEEEECSSCTTEEEEE
T ss_pred ------EEEEEECCCCCCEEEEE
Confidence 11245999998766655
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=94.30 E-value=0.3 Score=54.30 Aligned_cols=142 Identities=8% Similarity=0.032 Sum_probs=77.7
Q ss_pred CccceeeeccCCCCCCCCCe-eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 15 SPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~-~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
+..+.|.++++ ..++.. .+..........+|||||+.|+..+. ...|.+.++.++ +..........
T Consensus 634 ~~d~~i~vw~~---~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~----d~~v~vwd~~~~--~~~~~~~~~~~---- 700 (1249)
T 3sfz_A 634 GADKTLQVFKA---ETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSA----DKKVKIWDSATG--KLVHTYDEHSE---- 700 (1249)
T ss_dssp ETTSCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSSEEEEEET----TSEEEEEETTTC--CEEEEEECCSS----
T ss_pred eCCCeEEEEEC---CCCCEEEEeccCCCCEEEEEEecCCCEEEEEeC----CCeEEEEECCCC--ceEEEEcCCCC----
Confidence 34567888887 555433 34444455667899999998886542 346888888776 43333222111
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCc
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 173 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~ 173 (494)
.-..+.|+|++...++.+.. . ++ .+.++|+.+++.......... .. ..
T Consensus 701 --~v~~~~~~~~~~~~~l~sg~-----------~-----d~---~v~vwd~~~~~~~~~~~~h~~----~v-------~~ 748 (1249)
T 3sfz_A 701 --QVNCCHFTNKSNHLLLATGS-----------N-----DF---FLKLWDLNQKECRNTMFGHTN----SV-------NH 748 (1249)
T ss_dssp --CEEEEEECSSSSCCEEEEEE-----------T-----TS---CEEEEETTSSSEEEEECCCSS----CE-------EE
T ss_pred --cEEEEEEecCCCceEEEEEe-----------C-----CC---eEEEEECCCcchhheecCCCC----CE-------EE
Confidence 11123488976543332211 1 12 388889888765443322111 01 12
Q ss_pred ccccccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 174 EDINLNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 174 ~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
..|+|++..++.... -..+.++++.+++
T Consensus 749 ~~~sp~~~~l~s~s~----dg~v~vwd~~~~~ 776 (1249)
T 3sfz_A 749 CRFSPDDELLASCSA----DGTLRLWDVRSAN 776 (1249)
T ss_dssp EEECSSTTEEEEEES----SSEEEEEEGGGTE
T ss_pred EEEecCCCEEEEEEC----CCeEEEEeCCCCc
Confidence 378888876654332 2456777766554
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=94.29 E-value=0.39 Score=44.72 Aligned_cols=87 Identities=11% Similarity=0.008 Sum_probs=46.6
Q ss_pred CCccceeeeccCCCCCCC---CCeeccccccccccceecC-------------CCceEEEEeeeeccceEEEEEcCCCCC
Q 011049 14 VSPRDIIYTQPAEPAEGE---KPEILHKLDLRFRSVSWCD-------------DSLALVNETWYKTSQTRTWLVCPGSKD 77 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~---~~~~lt~~~~~~~~p~wsp-------------Dg~~i~f~~~~~~~~~~~~~~~~~~g~ 77 (494)
.+..+.|.++++ ..+ ....+.........+.|+| |++.|+..+. ...|.+.++..+.
T Consensus 121 ~~~d~~i~v~d~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~ 193 (379)
T 3jrp_A 121 ASSDGKVSVVEF---KENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA----DNLVKIWKYNSDA 193 (379)
T ss_dssp EETTSEEEEEEC---CTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEET----TSCEEEEEEETTT
T ss_pred ecCCCcEEEEec---CCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeC----CCeEEEEEecCCC
Confidence 345568888888 433 2223334445566789999 6888776542 2345555555442
Q ss_pred CCceEeeecccccccCCCCCC--ceeeCCC---CCEEEEEE
Q 011049 78 VAPRVLFDRVFENVYSDPGSP--MMTRTST---GTNVIAKI 113 (494)
Q Consensus 78 ~~~~~lt~~~~~~~~~~~~~~--~~~~spD---G~~i~~~~ 113 (494)
.....+...... ..+ .+.|+|| |+.++...
T Consensus 194 ~~~~~~~~~~~h------~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 194 QTYVLESTLEGH------SDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp TEEEEEEEECCC------SSCEEEEEECCCCSSSEEEEEEE
T ss_pred cceeeEEEEecc------cCcEeEEEECCCCCCCCeEEEEe
Confidence 122222222211 122 2449999 66665543
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.20 E-value=1.7 Score=40.05 Aligned_cols=122 Identities=7% Similarity=-0.012 Sum_probs=65.5
Q ss_pred cccccccccceecCC---CceEEEEeeeeccceEEEEEcCCCCCCCc-eEeeecccccccCCCCCCceeeCCCCCEEEEE
Q 011049 37 HKLDLRFRSVSWCDD---SLALVNETWYKTSQTRTWLVCPGSKDVAP-RVLFDRVFENVYSDPGSPMMTRTSTGTNVIAK 112 (494)
Q Consensus 37 t~~~~~~~~p~wspD---g~~i~f~~~~~~~~~~~~~~~~~~g~~~~-~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~ 112 (494)
..........+|+|| |+.|+..+ . ...|.+.++....... +.+...... -..+.|+|||+.|+..
T Consensus 36 ~~h~~~v~~~~~~~~~~~g~~l~~~~-~---dg~i~iw~~~~~~~~~~~~~~~h~~~-------v~~~~~~~~~~~l~s~ 104 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTLPGNFLIAGS-W---ANDVRCWEVQDSGQTIPKAQQMHTGP-------VLDVCWSDDGSKVFTA 104 (368)
T ss_dssp SCCSSCEEEEEECCTTSSSEEEEEEE-T---TSEEEEEEECTTSCEEEEEEEECSSC-------EEEEEECTTSSEEEEE
T ss_pred cCCCCceEEEEEcCCCCCceEEEEEC-C---CCcEEEEEcCCCCceeEEEeccccCC-------EEEEEECcCCCEEEEE
Confidence 344456678899999 57766543 2 2345555555421121 122211111 1124599999988865
Q ss_pred EeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc--cccCcEEEEEEecC
Q 011049 113 IKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI--NLNQLKILTSKESK 190 (494)
Q Consensus 113 ~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~--s~d~~~~~~~~~s~ 190 (494)
.. ++ .+.++|+++++...+...... . ....| ++++..++. ...
T Consensus 105 ~~------------------dg---~v~iwd~~~~~~~~~~~~~~~-----v-------~~~~~~~~~~~~~l~~-~~~- 149 (368)
T 3mmy_A 105 SC------------------DK---TAKMWDLSSNQAIQIAQHDAP-----V-------KTIHWIKAPNYSCVMT-GSW- 149 (368)
T ss_dssp ET------------------TS---EEEEEETTTTEEEEEEECSSC-----E-------EEEEEEECSSCEEEEE-EET-
T ss_pred cC------------------CC---cEEEEEcCCCCceeeccccCc-----e-------EEEEEEeCCCCCEEEE-ccC-
Confidence 41 11 388889988876554433321 1 11255 666655443 322
Q ss_pred CCCCeEEEEEcCCCce
Q 011049 191 TEITQYHILSWPLKKS 206 (494)
Q Consensus 191 ~~p~~l~~~~~~~~~~ 206 (494)
-..+.++++.+++.
T Consensus 150 --dg~i~vwd~~~~~~ 163 (368)
T 3mmy_A 150 --DKTLKFWDTRSSNP 163 (368)
T ss_dssp --TSEEEEECSSCSSC
T ss_pred --CCcEEEEECCCCcE
Confidence 24678888766543
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=94.04 E-value=0.46 Score=45.45 Aligned_cols=140 Identities=9% Similarity=0.044 Sum_probs=74.1
Q ss_pred ccceeeeccCCCCCCCCC-----eeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc
Q 011049 16 PRDIIYTQPAEPAEGEKP-----EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN 90 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~-----~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~ 90 (494)
..+.|.+++. ..++. .............+|+|++..++.+..-. ....|.+.++.++ ...........
T Consensus 250 ~D~~v~i~~~---~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs-~D~~I~iwd~~t~--~~~~~~~~~~~- 322 (420)
T 4gga_A 250 NDNLVNVWPS---APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT-SDRHIRIWNVCSG--ACLSAVDAHSQ- 322 (420)
T ss_dssp TTSCEEEEES---SCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECT-TTCEEEEEETTTT--EEEEEEECSSC-
T ss_pred ccccceEEee---ccccccceeeeeecccCCceeeeeeCCCcccEEEEEeec-CCCEEEEEeCCcc--ccceeeccccc-
Confidence 3456777777 33321 12223333445678999988777654321 1346777787766 33332222211
Q ss_pred ccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccC
Q 011049 91 VYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFG 170 (494)
Q Consensus 91 ~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~ 170 (494)
-....|+|+++.++..... .++ .|.++|+.+++.......-.. .+.
T Consensus 323 ------v~~~~~~~~~~~lv~~sg~----------------~d~---~I~iwd~~~~~~v~~l~gH~~----~V~----- 368 (420)
T 4gga_A 323 ------VCSILWSPHYKELISGHGF----------------AQN---QLVIWKYPTMAKVAELKGHTS----RVL----- 368 (420)
T ss_dssp ------EEEEEEETTTTEEEEEECT----------------TTC---CEEEEETTTCCEEEEECCCSS----CEE-----
T ss_pred ------eeeeeecCCCCeEEEEEec----------------CCC---EEEEEECCCCcEEEEEcCCCC----CEE-----
Confidence 1123389999988876521 112 388899988765443321110 011
Q ss_pred CCcccccccCcEEEEEEecCCCCCeEEEEEcC
Q 011049 171 QGEEDINLNQLKILTSKESKTEITQYHILSWP 202 (494)
Q Consensus 171 ~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~ 202 (494)
...|+|||..++ +.+. -..|.++++.
T Consensus 369 --~l~~spdg~~l~-S~s~---D~tvriWdv~ 394 (420)
T 4gga_A 369 --SLTMSPDGATVA-SAAA---DETLRLWRCF 394 (420)
T ss_dssp --EEEECTTSSCEE-EEET---TTEEEEECCS
T ss_pred --EEEEcCCCCEEE-EEec---CCeEEEEECC
Confidence 237889987654 3332 1345555543
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=93.94 E-value=2.7 Score=37.49 Aligned_cols=52 Identities=12% Similarity=0.031 Sum_probs=33.5
Q ss_pred CccceeeeccCCCCCCCCCeeccccc--cccccceecCCCceEEEEeeeeccceEEEEEcCCC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLD--LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 75 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~--~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~ 75 (494)
+..+.|+++|. +.|+..--.... .......++|||+.|+ . . ...++.++.++
T Consensus 12 ~~~~~v~~~d~---~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s-~----~~~V~~~d~~G 65 (276)
T 3no2_A 12 SGWNKIAIINK---DTKEIVWEYPLEKGWECNSVAATKAGEILF-S-Y----SKGAKMITRDG 65 (276)
T ss_dssp TTCSEEEEEET---TTTEEEEEEECCTTCCCCEEEECTTSCEEE-E-C----BSEEEEECTTS
T ss_pred CCCCEEEEEEC---CCCeEEEEeCCCccCCCcCeEECCCCCEEE-e-C----CCCEEEECCCC
Confidence 34578999988 667654333322 2345678999998655 2 1 34688888843
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=93.93 E-value=0.68 Score=46.52 Aligned_cols=138 Identities=9% Similarity=-0.054 Sum_probs=75.0
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
+.|++++. +.....+..........+|+|||+.++++... ...+.+.++..+ +. +........ .+.
T Consensus 142 ~~v~~~d~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d~~v~vwd~~~~--~~--~~~~~~~~~---~~~ 207 (615)
T 1pgu_A 142 GVFISWDS----GNSLGEVSGHSQRINACHLKQSRPMRSMTVGD---DGSVVFYQGPPF--KF--SASDRTHHK---QGS 207 (615)
T ss_dssp EEEEETTT----CCEEEECCSCSSCEEEEEECSSSSCEEEEEET---TTEEEEEETTTB--EE--EEEECSSSC---TTC
T ss_pred cEEEEEEC----CCcceeeecCCccEEEEEECCCCCcEEEEEeC---CCcEEEEeCCCc--ce--eeeecccCC---CCc
Confidence 57888875 23344455555566678999999855555433 345777777654 32 222221110 000
Q ss_pred C--ceeeCCC-CCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEE-e---eCcchhhhheeeeccC
Q 011049 98 P--MMTRTST-GTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIW-E---SNREKYFETAVALVFG 170 (494)
Q Consensus 98 ~--~~~~spD-G~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~-~---~~~~~~~~~~~~~~s~ 170 (494)
+ .+.|+|| |+.++.... ++ .+.++|+.+++..... . .... ..
T Consensus 208 ~v~~~~~~~~~~~~l~~~~~------------------dg---~i~vwd~~~~~~~~~~~~~~~~~~~----~v------ 256 (615)
T 1pgu_A 208 FVRDVEFSPDSGEFVITVGS------------------DR---KISCFDGKSGEFLKYIEDDQEPVQG----GI------ 256 (615)
T ss_dssp CEEEEEECSTTCCEEEEEET------------------TC---CEEEEETTTCCEEEECCBTTBCCCS----CE------
T ss_pred eEEEEEECCCCCCEEEEEeC------------------CC---eEEEEECCCCCEeEEecccccccCC----ce------
Confidence 2 2448999 987776541 12 3888898887755544 1 1110 01
Q ss_pred CCcccccccCcEEEEEEecCCCCCeEEEEEcCCCce
Q 011049 171 QGEEDINLNQLKILTSKESKTEITQYHILSWPLKKS 206 (494)
Q Consensus 171 ~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~ 206 (494)
....|+ ++..++.... -..+.++++.+++.
T Consensus 257 -~~~~~~-~~~~l~~~~~----d~~i~~wd~~~~~~ 286 (615)
T 1pgu_A 257 -FALSWL-DSQKFATVGA----DATIRVWDVTTSKC 286 (615)
T ss_dssp -EEEEES-SSSEEEEEET----TSEEEEEETTTTEE
T ss_pred -EEEEEc-CCCEEEEEcC----CCcEEEEECCCCcE
Confidence 112566 6665544322 24577777766543
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=93.92 E-value=0.61 Score=43.34 Aligned_cols=55 Identities=13% Similarity=0.075 Sum_probs=35.3
Q ss_pred CccceeeeccCCCCCCCC---CeeccccccccccceecCC--CceEEEEeeeeccceEEEEEcCCCC
Q 011049 15 SPRDIIYTQPAEPAEGEK---PEILHKLDLRFRSVSWCDD--SLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~---~~~lt~~~~~~~~p~wspD--g~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
+..+.|.++++ ..++ ...+..........+|+|| |+.|+..+. ...|.+.++..+
T Consensus 76 ~~dg~v~iwd~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~----d~~i~v~d~~~~ 135 (379)
T 3jrp_A 76 SYDGKVLIWKE---ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS----DGKVSVVEFKEN 135 (379)
T ss_dssp ETTSCEEEEEE---ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET----TSEEEEEECCTT
T ss_pred ccCCEEEEEEc---CCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecC----CCcEEEEecCCC
Confidence 34567888888 5554 2223334455667889999 888776542 446777777755
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=93.79 E-value=0.62 Score=42.70 Aligned_cols=110 Identities=11% Similarity=0.070 Sum_probs=55.8
Q ss_pred ccceeeeccCCCCCC-CCC--e-eccccccccccceecC-CCceEEEEeeeeccceEEEEEcCCCCC--CCceEeeeccc
Q 011049 16 PRDIIYTQPAEPAEG-EKP--E-ILHKLDLRFRSVSWCD-DSLALVNETWYKTSQTRTWLVCPGSKD--VAPRVLFDRVF 88 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~-~~~--~-~lt~~~~~~~~p~wsp-Dg~~i~f~~~~~~~~~~~~~~~~~~g~--~~~~~lt~~~~ 88 (494)
..+.|.++++ .. +.. . ............+|+| ||+.|+..+. ++ .-.+|.++..+.. ...........
T Consensus 168 ~d~~i~i~d~---~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~-dg-~i~i~~~~~~~~~~~~~~~~~~~~~~ 242 (342)
T 1yfq_A 168 NNSQVQWFRL---PLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSI-DG-RVAVEFFDDQGDDYNSSKRFAFRCHR 242 (342)
T ss_dssp STTEEEEEES---SCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEET-TS-EEEEEECCTTCCSTTCTTCEEEECCC
T ss_pred CCCeEEEEEC---CccccccceeeecCCCCceeEEEECCCCCCEEEEEec-CC-cEEEEEEcCCCcccccccceeeeccc
Confidence 3458888888 43 222 1 2223334456778999 9998776543 22 3345545544110 12222222211
Q ss_pred ccc-cCCCCCC--ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEE
Q 011049 89 ENV-YSDPGSP--MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKER 151 (494)
Q Consensus 89 ~~~-~~~~~~~--~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~ 151 (494)
... ...-..+ .+.|+|||+.|+.... ++ .+.++|+.+++...
T Consensus 243 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~------------------dg---~i~vwd~~~~~~~~ 287 (342)
T 1yfq_A 243 LNLKDTNLAYPVNSIEFSPRHKFLYTAGS------------------DG---IISCWNLQTRKKIK 287 (342)
T ss_dssp CCTTCCSSCCCEEEEEECTTTCCEEEEET------------------TS---CEEEEETTTTEEEE
T ss_pred ccccccccceeEEEEEEcCCCCEEEEecC------------------Cc---eEEEEcCccHhHhh
Confidence 100 0000112 2458999998776541 12 28888988876443
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=93.69 E-value=1 Score=42.95 Aligned_cols=117 Identities=8% Similarity=-0.047 Sum_probs=64.2
Q ss_pred ccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCC--ceeeCCCCCEEEEEEeccC
Q 011049 40 DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP--MMTRTSTGTNVIAKIKKEN 117 (494)
Q Consensus 40 ~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~--~~~~spDG~~i~~~~~~~~ 117 (494)
........|+||++.|+-.+. ...|.+.++.++ +........ ..+ .+.|+|||+.++-.+.
T Consensus 108 ~~~V~~~~~~p~~~~l~s~s~----Dg~i~vwd~~~~--~~~~~l~~h--------~~~V~~v~~~~~~~~l~sgs~--- 170 (410)
T 1vyh_C 108 RSPVTRVIFHPVFSVMVSASE----DATIKVWDYETG--DFERTLKGH--------TDSVQDISFDHSGKLLASCSA--- 170 (410)
T ss_dssp SSCEEEEEECSSSSEEEEEES----SSCEEEEETTTC--CCCEEECCC--------SSCEEEEEECTTSSEEEEEET---
T ss_pred CCcEEEEEEcCCCCEEEEEeC----CCeEEEEECCCC--cEEEEEecc--------CCcEEEEEEcCCCCEEEEEeC---
Confidence 334456789999997765542 335777777766 333322211 112 2448999997765541
Q ss_pred ccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEE
Q 011049 118 DEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYH 197 (494)
Q Consensus 118 ~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~ 197 (494)
++ .+.++|+.+++.......... .. ....|+|++..++. .+. -..+.
T Consensus 171 ---------------D~---~i~iwd~~~~~~~~~~~~h~~----~V-------~~v~~~p~~~~l~s-~s~---D~~i~ 217 (410)
T 1vyh_C 171 ---------------DM---TIKLWDFQGFECIRTMHGHDH----NV-------SSVSIMPNGDHIVS-ASR---DKTIK 217 (410)
T ss_dssp ---------------TS---CCCEEETTSSCEEECCCCCSS----CE-------EEEEECSSSSEEEE-EET---TSEEE
T ss_pred ---------------CC---eEEEEeCCCCceeEEEcCCCC----CE-------EEEEEeCCCCEEEE-EeC---CCeEE
Confidence 11 266778877654332211110 01 12377888876543 222 24677
Q ss_pred EEEcCCCce
Q 011049 198 ILSWPLKKS 206 (494)
Q Consensus 198 ~~~~~~~~~ 206 (494)
++++.++..
T Consensus 218 ~wd~~~~~~ 226 (410)
T 1vyh_C 218 MWEVQTGYC 226 (410)
T ss_dssp EEETTTCCE
T ss_pred EEECCCCcE
Confidence 888776653
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=93.67 E-value=0.17 Score=45.36 Aligned_cols=41 Identities=22% Similarity=0.190 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC
Q 011049 323 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 323 ~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~ 365 (494)
...+++...++.+.++.. ..+|.++|||+||.+|..++...
T Consensus 118 ~~~~~~~~~l~~~~~~~~--~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 118 QVVNDYFPVVQEQLTAHP--TYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHHHHHCT--TCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCC--CCeEEEeccChHHHHHHHHHHHH
Confidence 445666777777666531 36899999999999998887654
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=93.64 E-value=1.6 Score=40.99 Aligned_cols=148 Identities=9% Similarity=0.031 Sum_probs=74.6
Q ss_pred ccceeeeccCCCCCCCCCeeccc------cccccccceecC-CCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccc
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHK------LDLRFRSVSWCD-DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVF 88 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~------~~~~~~~p~wsp-Dg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~ 88 (494)
..+.|.++|+ ..++...... .........|+| |++.|+-.+ .+ ..|.+.|+.......+.+.....
T Consensus 178 ~D~~i~~wd~---~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs-~D---~~v~~wd~~~~~~~~~~~~~h~~ 250 (380)
T 3iz6_a 178 GDQTCVLWDV---TTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGS-CD---TTVRLWDLRITSRAVRTYHGHEG 250 (380)
T ss_dssp TTSCEEEECT---TTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEE-TT---SCEEEEETTTTCCCCEEECCCSS
T ss_pred CCCcEEEEEc---CCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEE-CC---CeEEEEECCCCCcceEEECCcCC
Confidence 4456778887 5555433221 112233456766 777665443 22 34555565422112222221111
Q ss_pred ccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeec
Q 011049 89 ENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALV 168 (494)
Q Consensus 89 ~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~ 168 (494)
. -..+.|+|||+.++-.+. ++ .+.++|+.+++....+...... .... .
T Consensus 251 ~-------v~~v~~~p~~~~l~s~s~------------------D~---~i~lwd~~~~~~~~~~~~~~~~-~~~~---~ 298 (380)
T 3iz6_a 251 D-------INSVKFFPDGQRFGTGSD------------------DG---TCRLFDMRTGHQLQVYNREPDR-NDNE---L 298 (380)
T ss_dssp C-------CCEEEECTTSSEEEEECS------------------SS---CEEEEETTTTEEEEEECCCCSS-SCCS---S
T ss_pred C-------eEEEEEecCCCeEEEEcC------------------CC---eEEEEECCCCcEEEEecccccc-cccc---c
Confidence 1 112459999997765431 12 2888999988765555432110 0000 0
Q ss_pred cCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCce
Q 011049 169 FGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKS 206 (494)
Q Consensus 169 s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~ 206 (494)
..-....|+|+|..++... .-..+++++...++.
T Consensus 299 ~~v~~~~~s~~g~~l~~g~----~dg~i~vwd~~~~~~ 332 (380)
T 3iz6_a 299 PIVTSVAFSISGRLLFAGY----SNGDCYVWDTLLAEM 332 (380)
T ss_dssp CSCSEEEECSSSSEEEEEC----TTSCEEEEETTTCCE
T ss_pred CceEEEEECCCCCEEEEEE----CCCCEEEEECCCCce
Confidence 0012347889998665432 235688888766543
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=93.56 E-value=2.7 Score=40.34 Aligned_cols=91 Identities=12% Similarity=-0.079 Sum_probs=47.3
Q ss_pred ccceeeeccCCCCCCCCCee-cccc--c-cccccceecCCCceEEEEeee------e---------ccceEEEEEcCCCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEI-LHKL--D-LRFRSVSWCDDSLALVNETWY------K---------TSQTRTWLVCPGSK 76 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~-lt~~--~-~~~~~p~wspDg~~i~f~~~~------~---------~~~~~~~~~~~~~g 76 (494)
..+.|+++|. ++.+... +..+ + ..-....|+||++.++-+.|- . ....+|.+++++++
T Consensus 162 ~~g~v~vlD~---~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~ 238 (462)
T 2ece_A 162 GPGGILMLDH---YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR 238 (462)
T ss_dssp SCCEEEEECT---TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT
T ss_pred CCCeEEEEEC---CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC
Confidence 4578999998 6555443 3222 1 112246789999954443220 0 12578999999865
Q ss_pred CCCceEeeecccccccCCCCCCceeeCCCCCEEEEEE
Q 011049 77 DVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 77 ~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
+...-..-.... ..|....+.++|||++.+...
T Consensus 239 --k~~~tI~vg~~g--~~P~~i~f~~~Pdg~~aYV~~ 271 (462)
T 2ece_A 239 --KRIHSLTLGEEN--RMALELRPLHDPTKLMGFINM 271 (462)
T ss_dssp --EEEEEEESCTTE--EEEEEEEECSSTTCCEEEEEE
T ss_pred --cEeeEEecCCCC--CccceeEeeECCCCCEEEEEE
Confidence 322221111000 011111222699999665544
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=93.45 E-value=1.1 Score=42.97 Aligned_cols=142 Identities=13% Similarity=0.098 Sum_probs=72.2
Q ss_pred CccceeeeccCCCCCCCC--------CeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCC-CCceEeee
Q 011049 15 SPRDIIYTQPAEPAEGEK--------PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKD-VAPRVLFD 85 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~--------~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~-~~~~~lt~ 85 (494)
+..+.|.++++ ..+. ...+..........+|+|++..++++... ...|.+.++..+. ........
T Consensus 201 ~~dg~i~vwd~---~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~---dg~i~i~d~~~~~~~~~~~~~~ 274 (430)
T 2xyi_A 201 SDDHTICLWDI---NATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD---DQKLMIWDTRNNNTSKPSHTVD 274 (430)
T ss_dssp CTTSCEEEEET---TSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEET---TSEEEEEETTCSCSSSCSEEEE
T ss_pred eCCCeEEEEeC---CCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeC---CCeEEEEECCCCCCCcceeEee
Confidence 44567888888 3321 12233334445678899965555544432 3467777877541 01111111
Q ss_pred cccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCc-eEEEEe-eCcchhhhh
Q 011049 86 RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS-KERIWE-SNREKYFET 163 (494)
Q Consensus 86 ~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~-~~~l~~-~~~~~~~~~ 163 (494)
.... .-..+.|+|+|++++++... ++ .|.++|+.+.. ...... ..+.
T Consensus 275 ~~~~------~v~~i~~~p~~~~~l~tg~~-----------------dg---~v~vwd~~~~~~~~~~~~~h~~~----- 323 (430)
T 2xyi_A 275 AHTA------EVNCLSFNPYSEFILATGSA-----------------DK---TVALWDLRNLKLKLHSFESHKDE----- 323 (430)
T ss_dssp CCSS------CEEEEEECSSCTTEEEEEET-----------------TS---EEEEEETTCTTSCSEEEECCSSC-----
T ss_pred cCCC------CeEEEEeCCCCCCEEEEEeC-----------------CC---eEEEEeCCCCCCCeEEeecCCCC-----
Confidence 1110 11134599999876655421 11 37777776632 212221 1111
Q ss_pred eeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 164 AVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 164 ~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
. ....|+|++..++++.... ..+.++++..
T Consensus 324 v-------~~i~~sp~~~~~l~s~~~d---~~i~iwd~~~ 353 (430)
T 2xyi_A 324 I-------FQVQWSPHNETILASSGTD---RRLHVWDLSK 353 (430)
T ss_dssp E-------EEEEECSSCTTEEEEEETT---SCCEEEEGGG
T ss_pred E-------EEEEECCCCCCEEEEEeCC---CcEEEEeCCC
Confidence 1 1237888887666655432 3466666544
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=93.24 E-value=1.9 Score=37.59 Aligned_cols=143 Identities=8% Similarity=-0.005 Sum_probs=77.5
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
+.|..+|+ ++++..+-...+....+-.-+++|+.|+-..++ .+.++++|+++. +.+...+.. ..
T Consensus 43 S~v~~vD~---~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~---~~~v~v~D~~tl----~~~~ti~~~------~~ 106 (243)
T 3mbr_X 43 SSVRKVDL---ETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR---NHEGFVYDLATL----TPRARFRYP------GE 106 (243)
T ss_dssp CEEEEEET---TTCCEEEEEECCTTCCEEEEEEETTEEEEEESS---SSEEEEEETTTT----EEEEEEECS------SC
T ss_pred ceEEEEEC---CCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee---CCEEEEEECCcC----cEEEEEeCC------CC
Confidence 46777787 767665544433333333456677887776554 458999999865 333332222 11
Q ss_pred CceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEee--CcchhhhheeeeccCCCccc
Q 011049 98 PMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES--NREKYFETAVALVFGQGEED 175 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~--~~~~~~~~~~~~~s~~~~~~ 175 (494)
+. ..++||++++.+- | ...|+.+|+++.+..+-... .+.. . ..-+ .
T Consensus 107 Gw-glt~dg~~L~vSd---------------g------s~~l~~iDp~t~~~~~~I~V~~~g~~-----~---~~lN--e 154 (243)
T 3mbr_X 107 GW-ALTSDDSHLYMSD---------------G------TAVIRKLDPDTLQQVGSIKVTAGGRP-----L---DNLN--E 154 (243)
T ss_dssp CC-EEEECSSCEEEEC---------------S------SSEEEEECTTTCCEEEEEECEETTEE-----C---CCEE--E
T ss_pred ce-EEeeCCCEEEEEC---------------C------CCeEEEEeCCCCeEEEEEEEccCCcc-----c---ccce--e
Confidence 11 1467887665431 1 12489999998776543332 1110 0 0001 1
Q ss_pred ccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 176 INLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 176 ~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
+...+++++... . ...+|.++|+++++......
T Consensus 155 Le~~~G~lyanv--w-~s~~I~vIDp~tG~V~~~id 187 (243)
T 3mbr_X 155 LEWVNGELLANV--W-LTSRIARIDPASGKVVAWID 187 (243)
T ss_dssp EEEETTEEEEEE--T-TTTEEEEECTTTCBEEEEEE
T ss_pred eEEeCCEEEEEE--C-CCCeEEEEECCCCCEEEEEE
Confidence 222234555433 2 23489999999988655443
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=93.18 E-value=1.5 Score=39.87 Aligned_cols=67 Identities=7% Similarity=-0.113 Sum_probs=36.3
Q ss_pred cccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCC--ceeeCC--CCCEEEEE
Q 011049 37 HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP--MMTRTS--TGTNVIAK 112 (494)
Q Consensus 37 t~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~--~~~~sp--DG~~i~~~ 112 (494)
..........+|+|||+.|+..+ . ...|.+.++..+....+.+...... ..+ .+.|+| ||+.++..
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~-~---dg~i~iw~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~d~~~l~s~ 77 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCS-S---DQHIKVFKLDKDTSNWELSDSWRAH------DSSIVAIDWASPEYGRIIASA 77 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEE-T---TSEEEEEEECSSSCCEEEEEEEECC------SSCEEEEEECCGGGCSEEEEE
T ss_pred cccccceeEEEEcCCCCEEEEee-C---CCeEEEEECCCCCCcceecceeccC------CCcEEEEEEcCCCCCCEEEEE
Confidence 33444566789999999877654 2 2345555555432132333322221 122 234899 68877765
Q ss_pred E
Q 011049 113 I 113 (494)
Q Consensus 113 ~ 113 (494)
.
T Consensus 78 ~ 78 (351)
T 3f3f_A 78 S 78 (351)
T ss_dssp E
T ss_pred c
Confidence 4
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=93.17 E-value=1.7 Score=44.73 Aligned_cols=142 Identities=6% Similarity=-0.073 Sum_probs=74.1
Q ss_pred CccceeeeccCCCCCCCCCe-eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 15 SPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~-~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
+..+.|.++|+ ..++.. .+..........+|||||+.|+-.+. ...|.+-++.+. ....+.. .....
T Consensus 449 s~Dg~v~vwd~---~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~----D~~i~iwd~~~~--~~~~~~~-~~~~h-- 516 (694)
T 3dm0_A 449 SWDGELRLWDL---AAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASR----DRTIKLWNTLGE--CKYTISE-GGEGH-- 516 (694)
T ss_dssp ETTSEEEEEET---TTTEEEEEEECCSSCEEEEEECTTSSCEEEEET----TSCEEEECTTSC--EEEEECS-STTSC--
T ss_pred eCCCcEEEEEC---CCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeC----CCEEEEEECCCC--cceeecc-CCCCC--
Confidence 34567888888 545433 34444455667889999998875542 233555555443 2122211 11110
Q ss_pred CCCCC--ceeeCCCCCE-EEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccC
Q 011049 94 DPGSP--MMTRTSTGTN-VIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFG 170 (494)
Q Consensus 94 ~~~~~--~~~~spDG~~-i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~ 170 (494)
... .+.|+|++.. .++... . ++ .+.++|+.+++.......... ..
T Consensus 517 --~~~v~~~~~~~~~~~~~l~s~s------------~-----d~---~v~vwd~~~~~~~~~~~~h~~----~v------ 564 (694)
T 3dm0_A 517 --RDWVSCVRFSPNTLQPTIVSAS------------W-----DK---TVKVWNLSNCKLRSTLAGHTG----YV------ 564 (694)
T ss_dssp --SSCEEEEEECSCSSSCEEEEEE------------T-----TS---CEEEEETTTCCEEEEECCCSS----CE------
T ss_pred --CCcEEEEEEeCCCCcceEEEEe------------C-----CC---eEEEEECCCCcEEEEEcCCCC----CE------
Confidence 111 2448998842 333321 1 11 288888888765443322111 01
Q ss_pred CCcccccccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 171 QGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 171 ~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
....|+||++.++. .+. -..+.++++.+++
T Consensus 565 -~~v~~spdg~~l~s-g~~---Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 565 -STVAVSPDGSLCAS-GGK---DGVVLLWDLAEGK 594 (694)
T ss_dssp -EEEEECTTSSEEEE-EET---TSBCEEEETTTTE
T ss_pred -EEEEEeCCCCEEEE-EeC---CCeEEEEECCCCc
Confidence 12378898876553 322 2456777776654
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.12 E-value=0.9 Score=42.70 Aligned_cols=141 Identities=11% Similarity=0.065 Sum_probs=75.3
Q ss_pred CCccceeeeccCCCCCCCCCeeccc--------------cccccccceecC-CCceEEEEeeeeccceEEEEEcCCCCCC
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEILHK--------------LDLRFRSVSWCD-DSLALVNETWYKTSQTRTWLVCPGSKDV 78 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~lt~--------------~~~~~~~p~wsp-Dg~~i~f~~~~~~~~~~~~~~~~~~g~~ 78 (494)
-+..+.|.++++ ++++...... ........+|+| +++.|+..+ . ...|.+.++.++
T Consensus 62 ~~~dg~i~iw~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~---d~~i~iwd~~~~-- 132 (408)
T 4a11_B 62 GGSDGVIVLYDL---ENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSS-F---DKTLKVWDTNTL-- 132 (408)
T ss_dssp EETTSCEEEEEC---CCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEE-T---TSEEEEEETTTT--
T ss_pred EcCCCeEEEEEC---CCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEe-C---CCeEEEeeCCCC--
Confidence 344678888888 5444333221 334456778999 555555432 2 346777788766
Q ss_pred CceEeeecccccccCCCCCCceeeCC---CCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEee
Q 011049 79 APRVLFDRVFENVYSDPGSPMMTRTS---TGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES 155 (494)
Q Consensus 79 ~~~~lt~~~~~~~~~~~~~~~~~~sp---DG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~ 155 (494)
+........... ..+.++| ++..++.... .+ .+.++|+.+++.......
T Consensus 133 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~------------------~~---~v~~~d~~~~~~~~~~~~ 184 (408)
T 4a11_B 133 QTADVFNFEETV-------YSHHMSPVSTKHCLVAVGTR------------------GP---KVQLCDLKSGSCSHILQG 184 (408)
T ss_dssp EEEEEEECSSCE-------EEEEECSSCSSCCEEEEEES------------------SS---SEEEEESSSSCCCEEECC
T ss_pred ccceeccCCCce-------eeeEeecCCCCCcEEEEEcC------------------CC---eEEEEeCCCcceeeeecC
Confidence 444444322111 1122555 4445555431 11 388888887764443322
Q ss_pred CcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 156 NREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 156 ~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
... .. ....|+|++..++++... -..+.++++....
T Consensus 185 ~~~----~v-------~~~~~~~~~~~ll~~~~~---dg~i~i~d~~~~~ 220 (408)
T 4a11_B 185 HRQ----EI-------LAVSWSPRYDYILATASA---DSRVKLWDVRRAS 220 (408)
T ss_dssp CCS----CE-------EEEEECSSCTTEEEEEET---TSCEEEEETTCSS
T ss_pred CCC----cE-------EEEEECCCCCcEEEEEcC---CCcEEEEECCCCC
Confidence 111 01 123788888866655443 2457777876543
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=92.86 E-value=0.47 Score=45.84 Aligned_cols=62 Identities=3% Similarity=-0.109 Sum_probs=33.3
Q ss_pred ccccccceecCC-CceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEE
Q 011049 40 DLRFRSVSWCDD-SLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 40 ~~~~~~p~wspD-g~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
.......+|+|+ ++.|+-.+ .+ ..|.+.++..+ .....+..... .--.++|||||++|+...
T Consensus 149 ~~~V~~v~~~p~~~~~las~s-~D---g~v~iwD~~~~--~~~~~~~~~~~------~v~~v~wspdg~~lasgs 211 (434)
T 2oit_A 149 GGMVIDMKWNPTVPSMVAVCL-AD---GSIAVLQVTET--VKVCATLPSTV------AVTSVCWSPKGKQLAVGK 211 (434)
T ss_dssp GGSEEEEEECSSCTTEEEEEE-TT---SCEEEEEESSS--EEEEEEECGGG------CEEEEEECTTSSCEEEEE
T ss_pred CCceEEEEECCCCCCEEEEEE-CC---CeEEEEEcCCC--cceeeccCCCC------ceeEEEEcCCCCEEEEEc
Confidence 344567789998 55555433 23 34666666654 22211111111 111345999999888764
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=92.85 E-value=2.5 Score=40.72 Aligned_cols=137 Identities=9% Similarity=0.016 Sum_probs=76.5
Q ss_pred ccceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
..+.|.++|+ ..++... +...........|+|||+.|+..+. ...|.+.++..+ +. +....+.
T Consensus 288 ~d~~i~vwd~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~----dg~i~vwd~~~~--~~--~~~~~~h----- 351 (464)
T 3v7d_B 288 YDNTLIVWDV---AQMKCLYILSGHTDRIYSTIYDHERKRCISASM----DTTIRIWDLENG--EL--MYTLQGH----- 351 (464)
T ss_dssp TTSCEEEEET---TTTEEEEEECCCSSCEEEEEEETTTTEEEEEET----TSCEEEEETTTT--EE--EEEECCC-----
T ss_pred CCCeEEEEEC---CCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeC----CCcEEEEECCCC--cE--EEEEeCC-----
Confidence 4567888888 5454433 3333445567789999998775532 346778888765 33 3222221
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcc
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEE 174 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~ 174 (494)
..++.+...+++.++.... ++ .+.++|+.+++.......... ....
T Consensus 352 -~~~v~~~~~~~~~l~s~s~------------------dg---~v~vwd~~~~~~~~~~~~~~~------------~~~~ 397 (464)
T 3v7d_B 352 -TALVGLLRLSDKFLVSAAA------------------DG---SIRGWDANDYSRKFSYHHTNL------------SAIT 397 (464)
T ss_dssp -SSCEEEEEECSSEEEEEET------------------TS---EEEEEETTTCCEEEEEECTTC------------CCEE
T ss_pred -CCcEEEEEEcCCEEEEEeC------------------CC---cEEEEECCCCceeeeecCCCC------------ccEE
Confidence 2333223334565554431 11 388888888764433322211 1123
Q ss_pred cccccCcEEEEEEecCCCCCeEEEEEcCCCcee
Q 011049 175 DINLNQLKILTSKESKTEITQYHILSWPLKKSS 207 (494)
Q Consensus 175 ~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~ 207 (494)
.+++++..++.. . -..+.+++..+++..
T Consensus 398 ~~~~~~~~l~~~-~----dg~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 398 TFYVSDNILVSG-S----ENQFNIYNLRSGKLV 425 (464)
T ss_dssp EEEECSSEEEEE-E----TTEEEEEETTTCCEE
T ss_pred EEEeCCCEEEEe-c----CCeEEEEECCCCcEE
Confidence 677888755542 2 257888898877643
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=92.83 E-value=0.45 Score=43.59 Aligned_cols=102 Identities=7% Similarity=0.005 Sum_probs=52.9
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccc-cccCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFE-NVYSD 94 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~-~~~~~ 94 (494)
..+.|.++|+ ...+...............|+|++..++-.. ...|.+.++.++ ........... .....
T Consensus 235 ~Dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----d~~i~iwd~~~~--~~~~~~~~~~~~~~~~~ 304 (340)
T 4aow_A 235 KDGQAMLWDL---NEGKHLYTLDGGDIINALCFSPNRYWLCAAT-----GPSIKIWDLEGK--IIVDELKQEVISTSSKA 304 (340)
T ss_dssp TTCEEEEEET---TTTEEEEEEECSSCEEEEEECSSSSEEEEEE-----TTEEEEEETTTT--EEEEEECCC-------C
T ss_pred CCCeEEEEEe---ccCceeeeecCCceEEeeecCCCCceeeccC-----CCEEEEEECCCC--eEEEeccccceeeeccC
Confidence 4467888888 5444444334444455678999987554322 345777777765 22211111100 00000
Q ss_pred CCCC--ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCc
Q 011049 95 PGSP--MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS 148 (494)
Q Consensus 95 ~~~~--~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~ 148 (494)
-... .+.|||||+.|+-... ++ .|.++|+++|+
T Consensus 305 h~~~v~~l~~s~dg~~l~sgs~------------------Dg---~v~iW~~~tGt 339 (340)
T 4aow_A 305 EPPQCTSLAWSADGQTLFAGYT------------------DN---LVRVWQVTIGT 339 (340)
T ss_dssp CCCCEEEEEECTTSSEEEEEET------------------TS---CEEEEEEEC--
T ss_pred CCCCEEEEEECCCCCEEEEEeC------------------CC---EEEEEeCCCcC
Confidence 0112 2458999998765431 12 28888888875
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=92.82 E-value=1.5 Score=38.59 Aligned_cols=114 Identities=8% Similarity=-0.057 Sum_probs=64.9
Q ss_pred ccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEE
Q 011049 44 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYI 123 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~ 123 (494)
.+..|+ |+ .|+.++-..+ ++.|.++|++++ +...-..-+. .-+-...+++|.+|+....
T Consensus 46 qGL~~~-~~-~LyestG~~g-~S~v~~vD~~Tg--kv~~~~~l~~-------~~FgeGit~~g~~ly~ltw--------- 104 (262)
T 3nol_A 46 EGFFYR-NG-YFYESTGLNG-RSSIRKVDIESG--KTLQQIELGK-------RYFGEGISDWKDKIVGLTW--------- 104 (262)
T ss_dssp EEEEEE-TT-EEEEEEEETT-EEEEEEECTTTC--CEEEEEECCT-------TCCEEEEEEETTEEEEEES---------
T ss_pred ceEEEE-CC-EEEEECCCCC-CceEEEEECCCC--cEEEEEecCC-------ccceeEEEEeCCEEEEEEe---------
Confidence 456788 65 5554443434 678999999987 3332222111 1111124677887755531
Q ss_pred EEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 124 LLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 124 ~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
.. ..++++|.++++...-....+. .-.+++|+++++.+. + ...|+.+|+++
T Consensus 105 ---------~~--~~v~v~D~~t~~~~~ti~~~~e--------------G~glt~dg~~L~~Sd-G---s~~i~~iDp~T 155 (262)
T 3nol_A 105 ---------KN--GLGFVWNIRNLRQVRSFNYDGE--------------GWGLTHNDQYLIMSD-G---TPVLRFLDPES 155 (262)
T ss_dssp ---------SS--SEEEEEETTTCCEEEEEECSSC--------------CCCEEECSSCEEECC-S---SSEEEEECTTT
T ss_pred ---------eC--CEEEEEECccCcEEEEEECCCC--------------ceEEecCCCEEEEEC-C---CCeEEEEcCCC
Confidence 11 2489999999876543332221 124567777776543 2 35799999887
Q ss_pred Ccee
Q 011049 204 KKSS 207 (494)
Q Consensus 204 ~~~~ 207 (494)
.+..
T Consensus 156 ~~v~ 159 (262)
T 3nol_A 156 LTPV 159 (262)
T ss_dssp CSEE
T ss_pred CeEE
Confidence 6543
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=92.69 E-value=0.18 Score=44.89 Aligned_cols=39 Identities=28% Similarity=0.310 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 324 LVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 324 ~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
..+++...++.+.++. ...+|.++|||+||.+|..++..
T Consensus 107 ~~~~~~~~l~~~~~~~--p~~~i~vtGHSLGGalA~l~a~~ 145 (261)
T 1uwc_A 107 VQDQVESLVKQQASQY--PDYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHHHHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHC--CCceEEEEecCHHHHHHHHHHHH
Confidence 4456666676666553 13689999999999999887765
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=92.58 E-value=0.6 Score=43.88 Aligned_cols=79 Identities=13% Similarity=0.044 Sum_probs=46.5
Q ss_pred ceecCCCceEEEEeeee-cc----ceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccc
Q 011049 46 VSWCDDSLALVNETWYK-TS----QTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQ 120 (494)
Q Consensus 46 p~wspDg~~i~f~~~~~-~~----~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~ 120 (494)
..++|||+.+++..... +. ...+.++|+.+. + .+..-+... .|.. +.++|||+++++....
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~--~--vv~~i~vg~---~p~g--i~~s~Dg~~l~va~~~----- 334 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG--Q--TSGPISNGH---DSDA--IIAAQDGASDNYANSA----- 334 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC--C--EEECCEEEE---EECE--EEECCSSSCEEEEEET-----
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCC--e--EEEEEECCC---Ccce--EEECCCCCEEEEEccC-----
Confidence 46999999977765411 10 124559999876 2 222222111 0122 2389999988887631
Q ss_pred eEEEEccCCCCCCCCCCceEeeecCCCceEEE
Q 011049 121 IYILLNGRGFTPEGNIPFLDLFDINTGSKERI 152 (494)
Q Consensus 121 ~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l 152 (494)
....+.++|+++++....
T Consensus 335 --------------~~~~VsVID~~t~kvv~~ 352 (368)
T 1mda_H 335 --------------GTEVLDIYDAASDQDQSS 352 (368)
T ss_dssp --------------TTTEEEEEESSSCEEEEE
T ss_pred --------------CCCeEEEEECCCCcEEEE
Confidence 011499999999876543
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=92.55 E-value=1.4 Score=46.99 Aligned_cols=55 Identities=7% Similarity=-0.080 Sum_probs=35.5
Q ss_pred CccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
+..+.|.++|+ ..++..............+|+|||+.|+..+. ...|.+.+++++
T Consensus 76 s~D~~v~lWd~---~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~----dg~V~lwd~~~~ 130 (902)
T 2oaj_A 76 NAKDTVYVLSL---YSQKVLTTVFVPGKITSIDTDASLDWMLIGLQ----NGSMIVYDIDRD 130 (902)
T ss_dssp ETTCEEEEEET---TTCSEEEEEECSSCEEEEECCTTCSEEEEEET----TSCEEEEETTTT
T ss_pred ECcCeEEEEEC---CCCcEEEEEcCCCCEEEEEECCCCCEEEEEcC----CCcEEEEECCCC
Confidence 34567888888 55554332223344567789999998876542 345777787765
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=92.51 E-value=0.71 Score=42.28 Aligned_cols=84 Identities=6% Similarity=-0.097 Sum_probs=45.6
Q ss_pred CccceeeeccCCCCCC---------CCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCC-CCCCceEee
Q 011049 15 SPRDIIYTQPAEPAEG---------EKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS-KDVAPRVLF 84 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~---------~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~-g~~~~~~lt 84 (494)
+..+.|.++++ .. +++..............|+||+ |+..+ . ...|.+.++.. +........
T Consensus 119 ~~d~~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~-~---d~~i~i~d~~~~~~~~~~~~~ 189 (342)
T 1yfq_A 119 SWDGLIEVIDP---RNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGM-N---NSQVQWFRLPLCEDDNGTIEE 189 (342)
T ss_dssp ETTSEEEEECH---HHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEE-S---TTEEEEEESSCCTTCCCEEEE
T ss_pred cCCCeEEEEcc---cccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEe-C---CCeEEEEECCccccccceeee
Confidence 34567788877 43 4433333344555678899998 44332 2 34688888876 421222222
Q ss_pred ecccccccCCCCCCceeeCC-CCCEEEEEE
Q 011049 85 DRVFENVYSDPGSPMMTRTS-TGTNVIAKI 113 (494)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~sp-DG~~i~~~~ 113 (494)
... .. .-..+.|+| ||+.++...
T Consensus 190 ~~~-~~-----~i~~i~~~~~~~~~l~~~~ 213 (342)
T 1yfq_A 190 SGL-KY-----QIRDVALLPKEQEGYACSS 213 (342)
T ss_dssp CSC-SS-----CEEEEEECSGGGCEEEEEE
T ss_pred cCC-CC-----ceeEEEECCCCCCEEEEEe
Confidence 111 10 111234899 998877665
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=92.50 E-value=4.9 Score=38.56 Aligned_cols=149 Identities=10% Similarity=0.010 Sum_probs=72.3
Q ss_pred CccceeeeccCCCCCCCCCee-ccccccccccceec--CCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeec-----
Q 011049 15 SPRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWC--DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR----- 86 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~ws--pDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~----- 86 (494)
+..+.|.++++ ..++... +...........|+ ||++.|+..+. ...+.+.++..+..........
T Consensus 180 s~dg~i~vwd~---~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~----d~~i~vwd~~~~~~~~~~~~~~~~~~~ 252 (464)
T 3v7d_B 180 STDRTVRVWDI---KKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSR----DNTLHVWKLPKESSVPDHGEEHDYPLV 252 (464)
T ss_dssp ETTSCEEEEET---TTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEET----TSCEEEEECCCCCCC------CCSSEE
T ss_pred eCCCCEEEEEC---CCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcC----CCcEEEeeCCCCcccccccccCCcceE
Confidence 34567888888 5554433 33233444456677 67777665542 2345555655441111100000
Q ss_pred ---cccc-----ccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcc
Q 011049 87 ---VFEN-----VYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNRE 158 (494)
Q Consensus 87 ---~~~~-----~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~ 158 (494)
+... ....-..++.+.+++|+.++.... ++ .+.++|+.+++..........
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~------------------d~---~i~vwd~~~~~~~~~~~~~~~ 311 (464)
T 3v7d_B 253 FHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSY------------------DN---TLIVWDVAQMKCLYILSGHTD 311 (464)
T ss_dssp ESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEET------------------TS---CEEEEETTTTEEEEEECCCSS
T ss_pred eeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeC------------------CC---eEEEEECCCCcEEEEecCCCC
Confidence 0000 000012334445667766655431 11 388889888765443322111
Q ss_pred hhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCce
Q 011049 159 KYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKS 206 (494)
Q Consensus 159 ~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~ 206 (494)
.. ....|++++..++.... -..+.++++.+++.
T Consensus 312 ----~v-------~~~~~~~~~~~l~sg~~----dg~i~vwd~~~~~~ 344 (464)
T 3v7d_B 312 ----RI-------YSTIYDHERKRCISASM----DTTIRIWDLENGEL 344 (464)
T ss_dssp ----CE-------EEEEEETTTTEEEEEET----TSCEEEEETTTTEE
T ss_pred ----CE-------EEEEEcCCCCEEEEEeC----CCcEEEEECCCCcE
Confidence 01 12367888876654332 24588888876654
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=92.50 E-value=2.4 Score=39.05 Aligned_cols=53 Identities=8% Similarity=-0.108 Sum_probs=32.7
Q ss_pred ccceeeeccCCCCCCCCCe-eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCC
Q 011049 16 PRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 75 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~-~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~ 75 (494)
..+.|.++|+ ..++.. .+..........+|+|||+.|+-.+. ...|.+.++.+
T Consensus 96 ~D~~v~lwd~---~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~----d~~i~~wd~~~ 149 (343)
T 2xzm_R 96 WDKTLRLWDL---RTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGA----EREIKLWNILG 149 (343)
T ss_dssp TTSEEEEEET---TSSCEEEEEECCCSCEEEEEECSSTTEEEEEET----TSCEEEEESSS
T ss_pred CCCcEEEEEC---CCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcC----CCEEEEEeccC
Confidence 4567888888 555443 34444445567889999998875442 23455555543
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=92.49 E-value=2.4 Score=40.75 Aligned_cols=118 Identities=8% Similarity=-0.063 Sum_probs=60.1
Q ss_pred cccceecCCCceEEEEeeeec-cceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccce
Q 011049 43 FRSVSWCDDSLALVNETWYKT-SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 121 (494)
Q Consensus 43 ~~~p~wspDg~~i~f~~~~~~-~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~ 121 (494)
-..++|+|||+ |+++...+. ....++.++..++-.....+.. +..|.... +.|++..|++...
T Consensus 184 P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~------~~~P~gia--vd~~~G~lyv~d~------- 247 (433)
T 4hw6_A 184 CADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLCN------ARGAKTCA--VHPQNGKIYYTRY------- 247 (433)
T ss_dssp EEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEEE------CSSBCCCE--ECTTTCCEEECBT-------
T ss_pred ccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeeccccccc------cCCCCEEE--EeCCCCeEEEEEC-------
Confidence 34677999999 555433221 1234666665543111112211 11233333 6884444655431
Q ss_pred EEEEccCCCCCCCCCCceEeeecCCCce-EEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEE
Q 011049 122 YILLNGRGFTPEGNIPFLDLFDINTGSK-ERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILS 200 (494)
Q Consensus 122 ~~~~~~~g~~~~~~~~~l~~~d~~~g~~-~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~ 200 (494)
...+|+++|.++|+. +.+...... .......++|+++.+++.... ...|++++
T Consensus 248 -------------~~~~V~~~d~~~g~~~~~~~~~~~~----------~~~~~ia~dpdG~~LYvad~~---~~~I~~~~ 301 (433)
T 4hw6_A 248 -------------HHAMISSYDPATGTLTEEEVMMDTK----------GSNFHIVWHPTGDWAYIIYNG---KHCIYRVD 301 (433)
T ss_dssp -------------TCSEEEEECTTTCCEEEEEEECSCC----------SSCEEEEECTTSSEEEEEETT---TTEEEEEE
T ss_pred -------------CCCEEEEEECCCCeEEEEEeccCCC----------CCcccEEEeCCCCEEEEEeCC---CCEEEEEe
Confidence 122599999987766 343322111 000124788899877765432 35788877
Q ss_pred cC
Q 011049 201 WP 202 (494)
Q Consensus 201 ~~ 202 (494)
.+
T Consensus 302 ~d 303 (433)
T 4hw6_A 302 YN 303 (433)
T ss_dssp BC
T ss_pred CC
Confidence 65
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.37 E-value=2.4 Score=38.11 Aligned_cols=126 Identities=9% Similarity=0.025 Sum_probs=65.9
Q ss_pred ccceeeeccCCCCCCCCCe-----eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc
Q 011049 16 PRDIIYTQPAEPAEGEKPE-----ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN 90 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~-----~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~ 90 (494)
..+.|.++|+ ..++.. .............|+|++..++....... ...+.+.+.... ..........
T Consensus 170 ~d~~i~iwd~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~i~lwd~~~~--~~~~~~~~~~-- 241 (318)
T 4ggc_A 170 NDNLVNVWPS---APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS-DRHIRIWNVCSG--ACLSAVDAHS-- 241 (318)
T ss_dssp TTSCEEEEES---SCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTT-TCEEEEEETTTC--CEEEEEECSS--
T ss_pred cCcceeEEEC---CCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCC-CCEEEEEecccc--ccccccccee--
Confidence 3456777777 433321 11122223345679999888776554222 345666666554 3222222111
Q ss_pred ccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccC
Q 011049 91 VYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFG 170 (494)
Q Consensus 91 ~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~ 170 (494)
.-....++|+++.++..+.. .++ .|.++|+.+++.......... .+
T Consensus 242 -----~v~~~~~~~~~~~~~~~sg~----------------~d~---~i~iwd~~~~~~~~~l~gH~~----~V------ 287 (318)
T 4ggc_A 242 -----QVCSILWSPHYKELISGHGF----------------AQN---QLVIWKYPTMAKVAELKGHTS----RV------ 287 (318)
T ss_dssp -----CEEEEEEETTTTEEEEEECT----------------TTC---CEEEEETTTCCEEEEECCCSS----CE------
T ss_pred -----eeeeeeecccccceEEEEEc----------------CCC---EEEEEECCCCcEEEEEcCCCC----CE------
Confidence 11223489999988776421 112 388899988875443332111 01
Q ss_pred CCcccccccCcEEE
Q 011049 171 QGEEDINLNQLKIL 184 (494)
Q Consensus 171 ~~~~~~s~d~~~~~ 184 (494)
....|+||+..++
T Consensus 288 -~~l~~spdg~~l~ 300 (318)
T 4ggc_A 288 -LSLTMSPDGATVA 300 (318)
T ss_dssp -EEEEECTTSSCEE
T ss_pred -EEEEEcCCCCEEE
Confidence 1237888887654
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=92.35 E-value=1.9 Score=41.20 Aligned_cols=122 Identities=8% Similarity=0.014 Sum_probs=67.3
Q ss_pred ccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEE
Q 011049 44 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYI 123 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~ 123 (494)
..++|+|||+ |+++ .. .+..|++++++++ ..+.+... . ..+.+.|+|||+.+++....
T Consensus 134 ~~la~d~~g~-lyv~-d~--~~~~I~~id~~~g--~~~~~~~~-~-------~~~~ia~~~~g~~l~~~d~~-------- 191 (409)
T 3hrp_A 134 WGIAAVGNNT-VLAY-QR--DDPRVRLISVDDN--KVTTVHPG-F-------KGGKPAVTKDKQRVYSIGWE-------- 191 (409)
T ss_dssp EEEEECSTTE-EEEE-ET--TTTEEEEEETTTT--EEEEEEET-C-------CBCBCEECTTSSEEEEEBSS--------
T ss_pred eEEEEeCCCC-EEEE-ec--CCCcEEEEECCCC--EEEEeecc-C-------CCCceeEecCCCcEEEEecC--------
Confidence 3567999998 4443 32 2468999999876 44444332 1 11224499999977665311
Q ss_pred EEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 124 LLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 124 ~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
. ...+++++..++............ ....-....++|+++.+++. .. ...+++++.++
T Consensus 192 ----------~-~~~I~~~d~~~~~~~~~~g~~~~~-------~~~~p~~iav~p~~g~lyv~-d~---~~~I~~~d~~~ 249 (409)
T 3hrp_A 192 ----------G-THTVYVYMKASGWAPTRIGQLGST-------FSGKIGAVALDETEEWLYFV-DS---NKNFGRFNVKT 249 (409)
T ss_dssp ----------T-TCEEEEEEGGGTTCEEEEEECCTT-------SCSCCCBCEECTTSSEEEEE-CT---TCEEEEEETTT
T ss_pred ----------C-CceEEEEEcCCCceeEEeeeccch-------hcCCcEEEEEeCCCCeEEEE-EC---CCcEEEEECCC
Confidence 1 114888888766542222100000 00001224677866667663 22 35799999887
Q ss_pred CceeEe
Q 011049 204 KKSSQI 209 (494)
Q Consensus 204 ~~~~~l 209 (494)
+....+
T Consensus 250 ~~~~~~ 255 (409)
T 3hrp_A 250 QEVTLI 255 (409)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 765544
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=92.15 E-value=9.1 Score=38.75 Aligned_cols=117 Identities=9% Similarity=-0.040 Sum_probs=60.0
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEE
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYIL 124 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~ 124 (494)
+.+..+.++.|+++ +. ....|++++++|. ..+.|...... .|.. +...|...+|+++-.
T Consensus 84 GlAvD~~~~~LY~t-D~--~~~~I~v~~~dG~--~~~~l~~~~l~----~P~~--iavdp~~G~lY~tD~---------- 142 (628)
T 4a0p_A 84 GMAVDWLGKNLYWA-DT--GTNRIEVSKLDGQ--HRQVLVWKDLD----SPRA--LALDPAEGFMYWTEW---------- 142 (628)
T ss_dssp EEEEETTTTEEEEE-ET--TTTEEEEEETTST--TCEEEECSSCC----CEEE--EEEETTTTEEEEEEC----------
T ss_pred eEEEEeCCCEEEEE-EC--CCCEEEEEecCCC--cEEEEEeCCCC----Cccc--EEEccCCCeEEEeCC----------
Confidence 44555566666664 22 2568999999986 44555432211 1222 225676556766531
Q ss_pred EccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCC
Q 011049 125 LNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 204 (494)
Q Consensus 125 ~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~ 204 (494)
+....|+++++++...+.+...-. .+. ...++++++++++.... ...|+++++++.
T Consensus 143 ---------g~~~~I~r~~~dG~~~~~l~~~~~-----~P~-------GlalD~~~~~LY~aD~~---~~~I~~~d~dG~ 198 (628)
T 4a0p_A 143 ---------GGKPKIDRAAMDGSERTTLVPNVG-----RAN-------GLTIDYAKRRLYWTDLD---TNLIESSNMLGL 198 (628)
T ss_dssp ---------SSSCEEEEEETTSCSCEEEECSCS-----SEE-------EEEEETTTTEEEEEETT---TTEEEEEETTSC
T ss_pred ---------CCCCEEEEEeCCCCceEEEECCCC-----Ccc-------eEEEccccCEEEEEECC---CCEEEEEcCCCC
Confidence 112357777777766555442110 011 12445555555554432 235666666554
Q ss_pred ce
Q 011049 205 KS 206 (494)
Q Consensus 205 ~~ 206 (494)
..
T Consensus 199 ~~ 200 (628)
T 4a0p_A 199 NR 200 (628)
T ss_dssp SC
T ss_pred ce
Confidence 43
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=92.14 E-value=0.42 Score=44.24 Aligned_cols=84 Identities=10% Similarity=-0.042 Sum_probs=51.0
Q ss_pred CccceeeeccCCCCCCCCCee-ccccccccccceecC-CCceEEEEeeeeccceEEEEEcCCCCCCCceEeeec-ccccc
Q 011049 15 SPRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCD-DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR-VFENV 91 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wsp-Dg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~-~~~~~ 91 (494)
+..+.|.++++ ..++... +..........+|+| |++.|+..+. ...|.+.++..+ +....... ...
T Consensus 92 ~~dg~i~v~d~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~--~~~~~~~~~~~~-- 160 (366)
T 3k26_A 92 GSRGIIRIINP---ITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK----DHALRLWNIQTD--TLVAIFGGVEGH-- 160 (366)
T ss_dssp ETTCEEEEECT---TTCCEEEEEESCCSCEEEEEECSSCTTEEEEEET----TSCEEEEETTTT--EEEEEECSTTSC--
T ss_pred cCCCEEEEEEc---hhceEeeeecCCCCcEEEEEECCCCCCEEEEEeC----CCeEEEEEeecC--eEEEEecccccc--
Confidence 45568999998 5555443 433455566789999 8887765542 346777788765 33333211 111
Q ss_pred cCCCCCC--ceeeCCCCCEEEEEE
Q 011049 92 YSDPGSP--MMTRTSTGTNVIAKI 113 (494)
Q Consensus 92 ~~~~~~~--~~~~spDG~~i~~~~ 113 (494)
..+ .+.|+|||+.++...
T Consensus 161 ----~~~v~~~~~~~~~~~l~~~~ 180 (366)
T 3k26_A 161 ----RDEVLSADYDLLGEKIMSCG 180 (366)
T ss_dssp ----SSCEEEEEECTTSSEEEEEE
T ss_pred ----cCceeEEEECCCCCEEEEec
Confidence 112 244899999877654
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=92.03 E-value=2.4 Score=39.33 Aligned_cols=69 Identities=10% Similarity=0.107 Sum_probs=40.4
Q ss_pred eeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCc-eEeeecCCCceEEEEee--CcchhhhheeeeccCCCcccc
Q 011049 100 MTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPF-LDLFDINTGSKERIWES--NREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 100 ~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-l~~~d~~~g~~~~l~~~--~~~~~~~~~~~~~s~~~~~~~ 176 (494)
+.|||||+.++-.+. +. . +.++|+.+++....... ... .. ....|
T Consensus 201 ~~~s~~g~~l~s~s~-------------------d~--~~v~iwd~~~~~~~~~~~~g~h~~----~v-------~~~~~ 248 (355)
T 3vu4_A 201 VRLNRKSDMVATCSQ-------------------DG--TIIRVFKTEDGVLVREFRRGLDRA----DV-------VDMKW 248 (355)
T ss_dssp EEECTTSSEEEEEET-------------------TC--SEEEEEETTTCCEEEEEECTTCCS----CE-------EEEEE
T ss_pred EEECCCCCEEEEEeC-------------------CC--CEEEEEECCCCcEEEEEEcCCCCC----cE-------EEEEE
Confidence 458999998776541 11 3 77888888765544431 110 01 12478
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCC
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLK 204 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~ 204 (494)
+||+..++.... -..+.++++...
T Consensus 249 s~~~~~l~s~s~----d~~v~iw~~~~~ 272 (355)
T 3vu4_A 249 STDGSKLAVVSD----KWTLHVFEIFND 272 (355)
T ss_dssp CTTSCEEEEEET----TCEEEEEESSCC
T ss_pred CCCCCEEEEEEC----CCEEEEEEccCC
Confidence 999886654332 245777776544
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=92.01 E-value=3 Score=42.26 Aligned_cols=99 Identities=11% Similarity=0.090 Sum_probs=58.8
Q ss_pred ceeeeccCCCCCCCCCeecccccc-ccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDL-RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~-~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
++|++.++ +|...+.|..... .-...+..|....|+++-+ . ...+|++++++|. ..+.+...- ..|.
T Consensus 102 ~~I~v~~~---dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~-g-~~~~I~r~~~dG~--~~~~l~~~~-----~~P~ 169 (628)
T 4a0p_A 102 NRIEVSKL---DGQHRQVLVWKDLDSPRALALDPAEGFMYWTEW-G-GKPKIDRAAMDGS--ERTTLVPNV-----GRAN 169 (628)
T ss_dssp TEEEEEET---TSTTCEEEECSSCCCEEEEEEETTTTEEEEEEC-S-SSCEEEEEETTSC--SCEEEECSC-----SSEE
T ss_pred CEEEEEec---CCCcEEEEEeCCCCCcccEEEccCCCeEEEeCC-C-CCCEEEEEeCCCC--ceEEEECCC-----CCcc
Confidence 45666666 6555555543322 2235568887667777643 2 2579999999987 556665311 1122
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceE
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKE 150 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~ 150 (494)
. +..++++++|++.-. ....|.++|++++..+
T Consensus 170 G--lalD~~~~~LY~aD~--------------------~~~~I~~~d~dG~~~~ 201 (628)
T 4a0p_A 170 G--LTIDYAKRRLYWTDL--------------------DTNLIESSNMLGLNRE 201 (628)
T ss_dssp E--EEEETTTTEEEEEET--------------------TTTEEEEEETTSCSCE
T ss_pred e--EEEccccCEEEEEEC--------------------CCCEEEEEcCCCCceE
Confidence 2 226888888877642 1224888888776554
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=91.90 E-value=6.6 Score=39.72 Aligned_cols=121 Identities=10% Similarity=0.007 Sum_probs=63.7
Q ss_pred ccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEE
Q 011049 44 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYI 123 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~ 123 (494)
.+.+..++++.|+++- .....|.+++++|. ..+.|...... .|...+ ..|.+.+|+|+-..
T Consensus 87 ~GlAvD~~~~~ly~~d---~~~~~I~v~~~dG~--~~~~l~~~~l~----~P~~Ia--vdp~~g~ly~tD~g-------- 147 (619)
T 3s94_A 87 DGLACDWLGEKLYWTD---SETNRIEVSNLDGS--LRKVLFWQELD----QPRAIA--LDPSSGFMYWTDWG-------- 147 (619)
T ss_dssp EEEEEETTTTEEEEEE---TTTTEEEEEETTSC--SCEEEECSSCS----CCCCEE--EETTTTEEEEEECS--------
T ss_pred CeEEEEecCCEEEEEe---CCCCEEEEEECCCC--CEEEEEeCCCC----CCceEE--EecCCCeEEEeccC--------
Confidence 3556777777776653 22568999999986 55555532211 233333 67776677776421
Q ss_pred EEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 124 LLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 124 ~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
..+.|++.++++...+.+...... .+. ...++++++++++.... ...|+++++++
T Consensus 148 -----------~~~~I~r~~~dG~~~~~l~~~~~~----~P~-------Glald~~~~~LY~aD~~---~~~I~~~~~dG 202 (619)
T 3s94_A 148 -----------EVPKIERAGMDGSSRFIIINSEIY----WPN-------GLTLDYEEQKLYWADAK---LNFIHKSNLDG 202 (619)
T ss_dssp -----------SSCEEEEEETTSCSCEEEECSSCS----SEE-------EEEEETTTTEEEEEETT---TCCEEEESSSC
T ss_pred -----------CCCEEEEEECCCCceEEEEeCCCC----CCc-------EEEEEccCCEEEEEeCC---CCeEEEecCCC
Confidence 123477777776554444322110 011 12455555566554322 24567777665
Q ss_pred CceeE
Q 011049 204 KKSSQ 208 (494)
Q Consensus 204 ~~~~~ 208 (494)
...+.
T Consensus 203 ~~~~~ 207 (619)
T 3s94_A 203 TNRQA 207 (619)
T ss_dssp CEEC-
T ss_pred CccEE
Confidence 44433
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=91.89 E-value=0.28 Score=44.93 Aligned_cols=53 Identities=19% Similarity=0.122 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC---CCceeEEEeCCC
Q 011049 323 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---PHLFCCGIARSG 377 (494)
Q Consensus 323 ~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~---p~~~~a~v~~~~ 377 (494)
...+++...++.+.++.. ..+|.+.|||+||.+|..++..- ...+++..-.+|
T Consensus 117 ~i~~~l~~~l~~~~~~~p--~~~i~vtGHSLGGAlA~L~a~~l~~~~~~v~~~TFG~P 172 (319)
T 3ngm_A 117 EISAAATAAVAKARKANP--SFKVVSVGHSLGGAVATLAGANLRIGGTPLDIYTYGSP 172 (319)
T ss_dssp HHHHHHHHHHHHHHHSST--TCEEEEEEETHHHHHHHHHHHHHHHTTCCCCEEEESCC
T ss_pred HHHHHHHHHHHHHHhhCC--CCceEEeecCHHHHHHHHHHHHHHhcCCCceeeecCCC
Confidence 344566666766666532 36899999999999988876642 233444444444
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=91.84 E-value=1 Score=40.62 Aligned_cols=50 Identities=8% Similarity=-0.024 Sum_probs=29.4
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceec----CCCceEEEEeeeeccceEEEEEcCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWC----DDSLALVNETWYKTSQTRTWLVCPG 74 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~ws----pDg~~i~f~~~~~~~~~~~~~~~~~ 74 (494)
+.||.++. + ++.+.+..........+|+ |||+.|++.... ...|++++++
T Consensus 153 ~~l~~~~~---~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~---~~~i~~~~~~ 206 (314)
T 1pjx_A 153 GSIYCFTT---D-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETP---TKKLWSYDIK 206 (314)
T ss_dssp EEEEEECT---T-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETT---TTEEEEEEEE
T ss_pred CeEEEECC---C-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECC---CCeEEEEECC
Confidence 45666655 4 4444443332233466899 999877665322 3578888765
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=91.82 E-value=1.8 Score=39.61 Aligned_cols=65 Identities=8% Similarity=0.114 Sum_probs=33.5
Q ss_pred cccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCC--ceeeCCCCCEEEEEE
Q 011049 39 LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP--MMTRTSTGTNVIAKI 113 (494)
Q Consensus 39 ~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~--~~~~spDG~~i~~~~ 113 (494)
........+|||||+.|+-.+. ...|.+.++.......+.+....+. ..+ .+.|+|||+.|+-.+
T Consensus 106 h~~~V~~v~~sp~g~~las~s~----D~~v~iwd~~~~~~~~~~~~~~~~h------~~~v~~v~~~p~~~~l~s~s 172 (330)
T 2hes_X 106 HENEVKGVAWSNDGYYLATCSR----DKSVWIWETDESGEEYECISVLQEH------SQDVKHVIWHPSEALLASSS 172 (330)
T ss_dssp ---CEEEEEECTTSCEEEEEET----TSCEEEEECCTTCCCCEEEEEECCC------SSCEEEEEECSSSSEEEEEE
T ss_pred CCCcEEEEEECCCCCEEEEEeC----CCEEEEEeccCCCCCeEEEEEeccC------CCceEEEEECCCCCEEEEEc
Confidence 3344557889999998776542 2345555553211122333222211 112 234899999776554
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=91.70 E-value=3.3 Score=37.88 Aligned_cols=85 Identities=12% Similarity=0.120 Sum_probs=41.5
Q ss_pred ccceeeeccCCCCCCCCCee---ccc--cccccccceecCCCceEEEEeeeeccceEEEEEcCCCCC---CCceEeeecc
Q 011049 16 PRDIIYTQPAEPAEGEKPEI---LHK--LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKD---VAPRVLFDRV 87 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~---lt~--~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~---~~~~~lt~~~ 87 (494)
..+.|.++++ ..+..+. +.. ........+|+|||+.|+-.+. ++ .-.|| ++..+. .+.+.+....
T Consensus 32 ~D~~i~lw~~---~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~-D~-~v~iw--~~~~~~~~~~~~~~~~~~~ 104 (330)
T 2hes_X 32 TDRKIKLVSV---KYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF-DS-TVSIW--AKEESADRTFEMDLLAIIE 104 (330)
T ss_dssp SSSCEEEEEC---SSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEET-TS-CEEEE--EC-------CCCEEEEEEC
T ss_pred CCCEEEEEEe---cCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeC-CC-cEEEE--EcccCcCccccceeEEEEc
Confidence 3457788887 4433222 211 2334457789999998775542 22 33455 443210 0112222212
Q ss_pred cccccCCCCCC--ceeeCCCCCEEEEEE
Q 011049 88 FENVYSDPGSP--MMTRTSTGTNVIAKI 113 (494)
Q Consensus 88 ~~~~~~~~~~~--~~~~spDG~~i~~~~ 113 (494)
+. ..+ .+.|||||++|+-.+
T Consensus 105 ~h------~~~V~~v~~sp~g~~las~s 126 (330)
T 2hes_X 105 GH------ENEVKGVAWSNDGYYLATCS 126 (330)
T ss_dssp ----------CEEEEEECTTSCEEEEEE
T ss_pred CC------CCcEEEEEECCCCCEEEEEe
Confidence 11 122 244999999887654
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=91.67 E-value=3.8 Score=37.45 Aligned_cols=52 Identities=13% Similarity=-0.075 Sum_probs=31.2
Q ss_pred ceeeeccCCCCCCCCCeeccc-cc-cccccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHK-LD-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~-~~-~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
+.|+++|. ++++..+... .. ......+++|||+ |+++ .. ....|++++.++.
T Consensus 69 ~~i~~~d~---~~g~~~~~~~~~~~~~p~gia~d~~g~-l~v~-d~--~~~~v~~~~~~g~ 122 (329)
T 3fvz_A 69 DTILVIDP---NNAEILQSSGKNLFYLPHGLSIDTDGN-YWVT-DV--ALHQVFKLDPHSK 122 (329)
T ss_dssp CCEEEECT---TTCCEEEEECTTTCSSEEEEEECTTSC-EEEE-ET--TTTEEEEECTTCS
T ss_pred CcEEEEEC---CCCeEEeccCCCccCCceEEEECCCCC-EEEE-EC--CCCEEEEEeCCCC
Confidence 46888887 5565443222 11 1223568999998 4443 32 2467999998764
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=91.56 E-value=0.33 Score=43.00 Aligned_cols=39 Identities=15% Similarity=0.186 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 324 LVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 324 ~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
..+++...++.+.++.. ..+|.+.|||+||.+|..++..
T Consensus 106 ~~~~~~~~l~~~~~~~p--~~~i~vtGHSLGGalA~l~a~~ 144 (258)
T 3g7n_A 106 VHDTIITEVKALIAKYP--DYTLEAVGHSLGGALTSIAHVA 144 (258)
T ss_dssp HHHHHHHHHHHHHHHST--TCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCC--CCeEEEeccCHHHHHHHHHHHH
Confidence 34556666666665531 2689999999999999877654
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=91.36 E-value=0.72 Score=41.52 Aligned_cols=78 Identities=6% Similarity=-0.092 Sum_probs=46.5
Q ss_pred CccceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
+..+.|.++|+ ..++... +..........+|+|||+ |+..+ ....|++.++..+ +..........
T Consensus 202 ~~dg~i~i~d~---~~~~~~~~~~~~~~~i~~~~~~~~~~-l~~~~----~dg~v~iwd~~~~--~~~~~~~~~~~---- 267 (313)
T 3odt_A 202 SNDGLIKLVDM---HTGDVLRTYEGHESFVYCIKLLPNGD-IVSCG----EDRTVRIWSKENG--SLKQVITLPAI---- 267 (313)
T ss_dssp ETTSEEEEEET---TTCCEEEEEECCSSCEEEEEECTTSC-EEEEE----TTSEEEEECTTTC--CEEEEEECSSS----
T ss_pred cCCCeEEEEEC---CchhhhhhhhcCCceEEEEEEecCCC-EEEEe----cCCEEEEEECCCC--ceeEEEeccCc----
Confidence 44568899998 5555443 333445566788999994 44332 2457888888876 44433332211
Q ss_pred CCCCCceeeCCCCCE
Q 011049 94 DPGSPMMTRTSTGTN 108 (494)
Q Consensus 94 ~~~~~~~~~spDG~~ 108 (494)
.-..+.|+|||+.
T Consensus 268 --~i~~~~~~~~~~~ 280 (313)
T 3odt_A 268 --SIWSVDCMSNGDI 280 (313)
T ss_dssp --CEEEEEECTTSCE
T ss_pred --eEEEEEEccCCCE
Confidence 1112448999983
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=91.34 E-value=2.4 Score=44.12 Aligned_cols=121 Identities=8% Similarity=0.014 Sum_probs=62.3
Q ss_pred ccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCc--eeeCCC--CCEEEEEE
Q 011049 38 KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPM--MTRTST--GTNVIAKI 113 (494)
Q Consensus 38 ~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~--~~~spD--G~~i~~~~ 113 (494)
.........+|||||+.|+..+. ...|.+.++.++ +.+.+....+. ..++ +.|+|+ |+.++...
T Consensus 7 gH~~~V~~l~~s~dg~~latg~~----dg~I~vwd~~~~--~~~~~~~l~~h------~~~V~~l~~s~~~~~~~l~s~s 74 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRLATCSS----DKTIKIFEVEGE--THKLIDTLTGH------EGPVWRVDWAHPKFGTILASCS 74 (753)
T ss_dssp -CCCCEEEECCCSSSCCEEEEET----TTEEEEEEEETT--EEEEEEEECCC------SSCEEEEEECCTTSCSEEEEEE
T ss_pred cCcceeEEEEECCCCCeEEEEEC----CCcEEEEecCCC--CCccceeccCC------cCceEEEEecCCCCCCEEEEEe
Confidence 33445667889999998776542 234555555443 32333332222 2222 448888 88777654
Q ss_pred eccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccccccc--CcEEEEEEecCC
Q 011049 114 KKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLN--QLKILTSKESKT 191 (494)
Q Consensus 114 ~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d--~~~~~~~~~s~~ 191 (494)
. ++ .+.++|+.+++...+....+. ...+ ....|+|+ +..++... .
T Consensus 75 ~------------------Dg---~I~vwd~~~~~~~~~~~~~~h---~~~V------~~v~~sp~~~~~~l~sgs-~-- 121 (753)
T 3jro_A 75 Y------------------DG---KVLIWKEENGRWSQIAVHAVH---SASV------NSVQWAPHEYGPLLLVAS-S-- 121 (753)
T ss_dssp T------------------TS---CEEEEEEETTEEEEEEEECCC---SSCE------EEEEECCGGGCSEEEEEE-T--
T ss_pred C------------------CC---eEEEEECCCCcccccccccCC---CCCe------EEEEECCCCCCCEEEEEe-C--
Confidence 1 12 288888888764333322211 0000 12367777 55544432 2
Q ss_pred CCCeEEEEEcCCC
Q 011049 192 EITQYHILSWPLK 204 (494)
Q Consensus 192 ~p~~l~~~~~~~~ 204 (494)
-..+.++++.++
T Consensus 122 -dg~I~vwdl~~~ 133 (753)
T 3jro_A 122 -DGKVSVVEFKEN 133 (753)
T ss_dssp -TSEEEEEECCSS
T ss_pred -CCcEEEEEeecC
Confidence 235666665544
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=91.02 E-value=4.8 Score=38.46 Aligned_cols=59 Identities=19% Similarity=0.141 Sum_probs=29.6
Q ss_pred eEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 139 LDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 139 l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
+.++|+.+++................+ ....|+|++..++...........+++++.+.
T Consensus 384 v~iwd~~~~~~~~~~~~~~~~~~~~~v------~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 384 VKLWDLKTGEFIRNLVTLESGGSGGVV------WRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEEEETTTCCEEEEEEECTTGGGTCEE------EEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred EEEEECCCCceeeeeeccccCCCCceE------EEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 888888887754433211000000001 12367788765554433333355677777653
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=91.01 E-value=3.1 Score=40.56 Aligned_cols=84 Identities=7% Similarity=0.122 Sum_probs=44.8
Q ss_pred eeeeccCCCCCCCCCeecccc-ccc---ccccee-------cCCCceEEEEeeeec---cceEEEEEcCCC-CCCCc---
Q 011049 19 IIYTQPAEPAEGEKPEILHKL-DLR---FRSVSW-------CDDSLALVNETWYKT---SQTRTWLVCPGS-KDVAP--- 80 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~~-~~~---~~~p~w-------spDg~~i~f~~~~~~---~~~~~~~~~~~~-g~~~~--- 80 (494)
.|+++|+ +++..+.|... ... ...++| ++||+.|++..+.++ ....+++++.+. |....
T Consensus 163 ~i~~ID~---~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~ 239 (496)
T 3kya_A 163 AIQLIDL---KNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSD 239 (496)
T ss_dssp EEEEEET---TTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSC
T ss_pred eEEEEEC---CCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeeccc
Confidence 5666666 55555544322 111 234569 999998777655442 135688886544 22221
Q ss_pred -eEeeecccccccCCCCCCceeeCCCCCEEEEEE
Q 011049 81 -RVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 81 -~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
+.+.. +..|.... ..|++.+|++..
T Consensus 240 ~~~v~~------~~~p~gia--vdp~~g~LYvtd 265 (496)
T 3kya_A 240 IQLIAA------YKQCNGAT--IHPINGELYFNS 265 (496)
T ss_dssp EEEEEE------ESCCCCEE--ECTTTCCEEEEE
T ss_pred ceeecc------CCCceEEE--EcCCCCeEEEEE
Confidence 23321 11223233 688777787765
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=91.00 E-value=2.4 Score=42.20 Aligned_cols=52 Identities=4% Similarity=-0.138 Sum_probs=32.8
Q ss_pred ceeeeccCCCCCC--CCC-eeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCC
Q 011049 18 DIIYTQPAEPAEG--EKP-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 75 (494)
Q Consensus 18 ~~i~~~~~~~~~~--~~~-~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~ 75 (494)
+.|-++|. .. ++. .+.......-.+..+||||++++... . ....+.+++++.
T Consensus 254 ~~V~VID~---~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~-~--~s~~VsVid~~~ 308 (595)
T 1fwx_A 254 NGVKVVDG---RKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAG-K--LSPTVTVLDVTR 308 (595)
T ss_dssp TTEEEEEC---SGGGCCSSEEEEEEESSCCCEEECTTSSEEEEEC-T--TSSBEEEEEGGG
T ss_pred CcEEEEeC---cccCCceeEEEEecCCCceEEEEcCCCCEEEEeC-C--CCCeEEEEECcc
Confidence 55888888 43 333 22222334556789999999866543 2 246788888873
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=90.78 E-value=5.1 Score=35.66 Aligned_cols=144 Identities=9% Similarity=-0.075 Sum_probs=70.8
Q ss_pred CccceeeeccCCCCCCCCCeeccccc-cccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccc-ccc
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLD-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFE-NVY 92 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~-~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~-~~~ 92 (494)
+..+.|+.+|. +|....++.... .......++|||+.|+-.+. . +..++.++.+|. ......-.... ...
T Consensus 53 s~~~~V~~~d~---~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~--~-~~~v~~vd~~Gk--~l~~~~~~~~~~~~~ 124 (276)
T 3no2_A 53 SYSKGAKMITR---DGRELWNIAAPAGCEMQTARILPDGNALVAWCG--H-PSTILEVNMKGE--VLSKTEFETGIERPH 124 (276)
T ss_dssp ECBSEEEEECT---TSCEEEEEECCTTCEEEEEEECTTSCEEEEEES--T-TEEEEEECTTSC--EEEEEEECCSCSSGG
T ss_pred eCCCCEEEECC---CCCEEEEEcCCCCccccccEECCCCCEEEEecC--C-CCEEEEEeCCCC--EEEEEeccCCCCccc
Confidence 34445666665 443333343321 23446789999997665331 1 467888887654 22222211110 000
Q ss_pred CCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCC
Q 011049 93 SDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQG 172 (494)
Q Consensus 93 ~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~ 172 (494)
..+. .+..++||..++... . ...+..+|++ |+ .+|.-.... .. .
T Consensus 125 ~~~~--~v~~~~~G~~lv~~~-------------------~--~~~v~~~d~~-G~--~~w~~~~~~---~~-------~ 168 (276)
T 3no2_A 125 AQFR--QINKNKKGNYLVPLF-------------------A--TSEVREIAPN-GQ--LLNSVKLSG---TP-------F 168 (276)
T ss_dssp GSCS--CCEECTTSCEEEEET-------------------T--TTEEEEECTT-SC--EEEEEECSS---CC-------C
T ss_pred cccc--CceECCCCCEEEEec-------------------C--CCEEEEECCC-CC--EEEEEECCC---Cc-------c
Confidence 0011 122688998664321 1 1148888888 65 345432210 00 0
Q ss_pred cccccccCcEEEEEEecCCCCCeEEEEEcCCCce
Q 011049 173 EEDINLNQLKILTSKESKTEITQYHILSWPLKKS 206 (494)
Q Consensus 173 ~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~ 206 (494)
...+.++|+.++.. .. ...++.++.++++.
T Consensus 169 ~~~~~~~g~~~v~~-~~---~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 169 SSAFLDNGDCLVAC-GD---AHCFVQLNLESNRI 198 (276)
T ss_dssp EEEECTTSCEEEEC-BT---TSEEEEECTTTCCE
T ss_pred ceeEcCCCCEEEEe-CC---CCeEEEEeCcCCcE
Confidence 12445666655432 22 24688888886654
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=90.40 E-value=0.4 Score=43.07 Aligned_cols=40 Identities=28% Similarity=0.286 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 323 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 323 ~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
....++...++.+.++.. ..+|.+.|||+||.+|..++..
T Consensus 119 ~~~~~~~~~l~~~~~~~p--~~~l~vtGHSLGGalA~l~a~~ 158 (279)
T 3uue_A 119 DLMDDIFTAVKKYKKEKN--EKRVTVIGHSLGAAMGLLCAMD 158 (279)
T ss_dssp HHHHHHHHHHHHHHHHHT--CCCEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCC--CceEEEcccCHHHHHHHHHHHH
Confidence 334556666666655421 3689999999999999887754
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=90.36 E-value=2.9 Score=37.54 Aligned_cols=83 Identities=8% Similarity=-0.088 Sum_probs=43.5
Q ss_pred cceeeeccCCCCCCCCCeeccc-----cccccccceecCC-CceEEEEeeeeccceEEEEEcCCCCCCCceEe-eecccc
Q 011049 17 RDIIYTQPAEPAEGEKPEILHK-----LDLRFRSVSWCDD-SLALVNETWYKTSQTRTWLVCPGSKDVAPRVL-FDRVFE 89 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~-----~~~~~~~p~wspD-g~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~l-t~~~~~ 89 (494)
.+.|+.++. ++++.+.+.. .........++|| |+ |++... ...|++++.+ + +.+.+ ......
T Consensus 45 ~~~i~~~d~---~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~~~----~~~l~~~d~~-g--~~~~~~~~~~~~ 113 (314)
T 1pjx_A 45 AGEILRIDL---KTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LFVADM----RLGLLVVQTD-G--TFEEIAKKDSEG 113 (314)
T ss_dssp CCEEEEECT---TTCCEEEEECCEETTEECCEEEEEECSSSSE-EEEEET----TTEEEEEETT-S--CEEECCSBCTTS
T ss_pred CCEEEEEeC---CCCcEEEEEecccCCCCCCCceEEEecCCCc-EEEEEC----CCCEEEEeCC-C--CEEEEEeccCCC
Confidence 456777776 5566555543 1123346779999 65 444321 2369999988 5 44444 321111
Q ss_pred cccCCCCCCceeeCCCCCEEEEEE
Q 011049 90 NVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 90 ~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
.....+. .+.++|||+ +++..
T Consensus 114 ~~~~~~~--~i~~d~~g~-l~v~~ 134 (314)
T 1pjx_A 114 RRMQGCN--DCAFDYEGN-LWITA 134 (314)
T ss_dssp CBCBCCC--EEEECTTSC-EEEEE
T ss_pred ccccCCc--CEEECCCCC-EEEEe
Confidence 1000112 233789996 54443
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=90.08 E-value=0.36 Score=38.90 Aligned_cols=63 Identities=17% Similarity=0.043 Sum_probs=45.3
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC--------------------CcEEEEEcCCCCCccCCcccHHHHHHH
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHG--------------------ALSRLVLLPFEHHVYAARENVMHVIWE 474 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g--------------------~~~~~~~~~~~~H~~~~~~~~~~~~~~ 474 (494)
..++||.+|..|.+|+ ...++.+.+.|.=.+ ....+..+.++||.... ..+...+..
T Consensus 64 girvlIy~Gd~D~i~~--~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~-dqP~~a~~m 140 (153)
T 1whs_B 64 GLRIWVFSGDTDAVVP--LTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPL-HRPRQALVL 140 (153)
T ss_dssp TCEEEEEEETTCSSSC--HHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHH-HSHHHHHHH
T ss_pred CceEEEEecCcCcccc--cHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcc-cCHHHHHHH
Confidence 5899999999999988 888889988885111 14788899999997532 334444444
Q ss_pred HHHHHH
Q 011049 475 TDRWLQ 480 (494)
Q Consensus 475 ~~~fl~ 480 (494)
+..|+.
T Consensus 141 ~~~fl~ 146 (153)
T 1whs_B 141 FQYFLQ 146 (153)
T ss_dssp HHHHHH
T ss_pred HHHHHC
Confidence 555554
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=89.88 E-value=2.2 Score=44.40 Aligned_cols=56 Identities=14% Similarity=0.106 Sum_probs=36.2
Q ss_pred CCccceeeeccCCCCCCCC---CeeccccccccccceecCC--CceEEEEeeeeccceEEEEEcCCCC
Q 011049 14 VSPRDIIYTQPAEPAEGEK---PEILHKLDLRFRSVSWCDD--SLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~---~~~lt~~~~~~~~p~wspD--g~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
.+..+.|.++++ .+++ ...+..........+|+|| |+.|+..+ ....|.+.++..+
T Consensus 73 ~s~Dg~I~vwd~---~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs----~dg~I~vwdl~~~ 133 (753)
T 3jro_A 73 CSYDGKVLIWKE---ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS----SDGKVSVVEFKEN 133 (753)
T ss_dssp EETTSCEEEEEE---ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE----TTSEEEEEECCSS
T ss_pred EeCCCeEEEEEC---CCCcccccccccCCCCCeEEEEECCCCCCCEEEEEe----CCCcEEEEEeecC
Confidence 344578888888 6554 2233334455667889999 88877654 2446777777654
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=89.78 E-value=0.52 Score=42.82 Aligned_cols=38 Identities=21% Similarity=0.244 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 325 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
..++...++.+.++.. ..+|.+.|||+||.+|..++..
T Consensus 137 ~~~i~~~l~~~~~~~p--~~~i~vtGHSLGGalA~l~a~~ 174 (301)
T 3o0d_A 137 YNQIGPKLDSVIEQYP--DYQIAVTGHSLGGAAALLFGIN 174 (301)
T ss_dssp HHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHHHH
Confidence 4445555665555431 3689999999999999887764
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=89.38 E-value=3.8 Score=43.63 Aligned_cols=146 Identities=7% Similarity=-0.034 Sum_probs=75.2
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
..+.|.+++. .+.+..............+|+| |+.|+-.+ . ...|.+-++.++ +..........
T Consensus 37 ~Dg~I~lw~~---~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s-~---D~~v~lWd~~~~--~~~~~~~~~~~------ 100 (902)
T 2oaj_A 37 VTGEVHIYGQ---QQVEVVIKLEDRSAIKEMRFVK-GIYLVVIN-A---KDTVYVLSLYSQ--KVLTTVFVPGK------ 100 (902)
T ss_dssp TTSEEEEECS---TTCEEEEECSSCCCEEEEEEET-TTEEEEEE-T---TCEEEEEETTTC--SEEEEEECSSC------
T ss_pred CCCEEEEEeC---CCcEEEEEcCCCCCEEEEEEcC-CCEEEEEE-C---cCeEEEEECCCC--cEEEEEcCCCC------
Confidence 4468889888 5444333333334456788999 88655443 2 345666677765 33322221111
Q ss_pred CCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcc---hhhhheeeeccCCC
Q 011049 96 GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNRE---KYFETAVALVFGQG 172 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~---~~~~~~~~~~s~~~ 172 (494)
--.+.|+|||++++.... ++ .+.++|+++++........-. .....+. ..-.
T Consensus 101 -V~~v~~sp~g~~l~sgs~------------------dg---~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~---~~V~ 155 (902)
T 2oaj_A 101 -ITSIDTDASLDWMLIGLQ------------------NG---SMIVYDIDRDQLSSFKLDNLQKSSFFPAARL---SPIV 155 (902)
T ss_dssp -EEEEECCTTCSEEEEEET------------------TS---CEEEEETTTTEEEEEEECCHHHHHTCSSSCC---CCCC
T ss_pred -EEEEEECCCCCEEEEEcC------------------CC---cEEEEECCCCccccceeccccccccccccCC---CCeE
Confidence 112448999998876541 12 288888888764321110000 0000000 0112
Q ss_pred cccccccCcEEEEEEecCCCCCeEEEEEcCCCce
Q 011049 173 EEDINLNQLKILTSKESKTEITQYHILSWPLKKS 206 (494)
Q Consensus 173 ~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~ 206 (494)
...|+|++..++++... -..+ ++++.+++.
T Consensus 156 sl~~sp~~~~~l~~g~~---dg~v-lWd~~~~~~ 185 (902)
T 2oaj_A 156 SIQWNPRDIGTVLISYE---YVTL-TYSLVENEI 185 (902)
T ss_dssp EEEEETTEEEEEEEECS---SCEE-EEETTTTEE
T ss_pred EEEEccCCCCEEEEEeC---CCcE-EEECCCCce
Confidence 34788865444444332 2456 778776654
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=89.27 E-value=3.6 Score=37.42 Aligned_cols=53 Identities=8% Similarity=-0.086 Sum_probs=31.3
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
+.||.++. ++++.+.+...-..-...+|+|||+.|++... ....|++++++++
T Consensus 165 g~v~~~d~---~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~---~~~~I~~~~~~~~ 217 (322)
T 2fp8_A 165 GRLIKYDP---STKETTLLLKELHVPGGAEVSADSSFVLVAEF---LSHQIVKYWLEGP 217 (322)
T ss_dssp EEEEEEET---TTTEEEEEEEEESCCCEEEECTTSSEEEEEEG---GGTEEEEEESSST
T ss_pred ceEEEEeC---CCCEEEEeccCCccCcceEECCCCCEEEEEeC---CCCeEEEEECCCC
Confidence 44555554 44443333222222345789999998776532 2468999998864
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=88.60 E-value=6.2 Score=34.32 Aligned_cols=114 Identities=8% Similarity=-0.128 Sum_probs=63.9
Q ss_pred ccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEE
Q 011049 44 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYI 123 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~ 123 (494)
.+..|++ ..|+.++-..+ ++.|.++|+.++ +..+-..-+... .-...+++|.+|+....
T Consensus 24 qGL~~~~--~~LyestG~~g-~S~v~~vD~~tg--kv~~~~~l~~~~-------fgeGi~~~~~~ly~ltw--------- 82 (243)
T 3mbr_X 24 EGLFYLR--GHLYESTGETG-RSSVRKVDLETG--RILQRAEVPPPY-------FGAGIVAWRDRLIQLTW--------- 82 (243)
T ss_dssp EEEEEET--TEEEEEECCTT-SCEEEEEETTTC--CEEEEEECCTTC-------CEEEEEEETTEEEEEES---------
T ss_pred ccEEEEC--CEEEEECCCCC-CceEEEEECCCC--CEEEEEeCCCCc-------ceeEEEEeCCEEEEEEe---------
Confidence 4667765 45555443334 678999999987 433322222111 01113566776655431
Q ss_pred EEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 124 LLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 124 ~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
.. ..++++|.++.+...-....+. .-.++.|+.+++.+. + ...|+.+|+++
T Consensus 83 ---------~~--~~v~v~D~~tl~~~~ti~~~~~--------------Gwglt~dg~~L~vSd-g---s~~l~~iDp~t 133 (243)
T 3mbr_X 83 ---------RN--HEGFVYDLATLTPRARFRYPGE--------------GWALTSDDSHLYMSD-G---TAVIRKLDPDT 133 (243)
T ss_dssp ---------SS--SEEEEEETTTTEEEEEEECSSC--------------CCEEEECSSCEEEEC-S---SSEEEEECTTT
T ss_pred ---------eC--CEEEEEECCcCcEEEEEeCCCC--------------ceEEeeCCCEEEEEC-C---CCeEEEEeCCC
Confidence 11 2489999999876543332221 114556777776653 2 35799999887
Q ss_pred Ccee
Q 011049 204 KKSS 207 (494)
Q Consensus 204 ~~~~ 207 (494)
.+..
T Consensus 134 ~~~~ 137 (243)
T 3mbr_X 134 LQQV 137 (243)
T ss_dssp CCEE
T ss_pred CeEE
Confidence 6543
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=88.40 E-value=2.1 Score=41.14 Aligned_cols=118 Identities=9% Similarity=-0.073 Sum_probs=58.1
Q ss_pred cccceecCCCceEEEEeeeeccceEEEEEcCCCC---C-CCce---EeeecccccccCCCCCC--ceeeCCC-CCEEEEE
Q 011049 43 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK---D-VAPR---VLFDRVFENVYSDPGSP--MMTRTST-GTNVIAK 112 (494)
Q Consensus 43 ~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g---~-~~~~---~lt~~~~~~~~~~~~~~--~~~~spD-G~~i~~~ 112 (494)
....+|||||+.|+....-......|.+.++.++ . ...+ .+....+. ..+ .+.|+|+ +..++..
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h------~~~V~~v~~~p~~~~~las~ 168 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDA------GGMVIDMKWNPTVPSMVAVC 168 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSG------GGSEEEEEECSSCTTEEEEE
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCC------CCceEEEEECCCCCCEEEEE
Confidence 4567899999998863210111334555554421 0 0111 11111111 111 2449998 5555443
Q ss_pred EeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCC
Q 011049 113 IKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTE 192 (494)
Q Consensus 113 ~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~ 192 (494)
. . ++ .+.++|+.++........... .. ....|+|+|..++....
T Consensus 169 s-------------~-----Dg---~v~iwD~~~~~~~~~~~~~~~----~v-------~~v~wspdg~~lasgs~---- 212 (434)
T 2oit_A 169 L-------------A-----DG---SIAVLQVTETVKVCATLPSTV----AV-------TSVCWSPKGKQLAVGKQ---- 212 (434)
T ss_dssp E-------------T-----TS---CEEEEEESSSEEEEEEECGGG----CE-------EEEEECTTSSCEEEEET----
T ss_pred E-------------C-----CC---eEEEEEcCCCcceeeccCCCC----ce-------eEEEEcCCCCEEEEEcC----
Confidence 3 1 12 288889888743221111110 01 12488999887765432
Q ss_pred CCeEEEEEcC
Q 011049 193 ITQYHILSWP 202 (494)
Q Consensus 193 p~~l~~~~~~ 202 (494)
-..+.+++..
T Consensus 213 dg~v~iwd~~ 222 (434)
T 2oit_A 213 NGTVVQYLPT 222 (434)
T ss_dssp TSCEEEECTT
T ss_pred CCcEEEEccC
Confidence 2467788876
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=88.33 E-value=10 Score=32.93 Aligned_cols=51 Identities=12% Similarity=-0.013 Sum_probs=27.1
Q ss_pred ceeeeccCCCCCCCCCeeccccc-cccccceecCCCceEEEEeeeeccceEEEEEcCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLD-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 75 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~-~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~ 75 (494)
+.|+.++. +++..+.+.... ......+++|||+ |++. ... ...|++++..+
T Consensus 87 ~~i~~~d~---~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~-~~~--~~~i~~~~~~~ 138 (270)
T 1rwi_B 87 NRVVTLAA---GSNNQTVLPFDGLNYPEGLAVDTQGA-VYVA-DRG--NNRVVKLAAGS 138 (270)
T ss_dssp TEEEEECT---TCSCCEECCCCSCSSEEEEEECTTCC-EEEE-EGG--GTEEEEECTTC
T ss_pred CEEEEEeC---CCceEeeeecCCcCCCcceEECCCCC-EEEE-ECC--CCEEEEEECCC
Confidence 35555555 444443332222 2234667999997 4443 221 45788886544
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.06 E-value=2.1 Score=38.42 Aligned_cols=81 Identities=12% Similarity=0.019 Sum_probs=46.8
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
+.|.+++. ...................|+|+++.++..+.. ....|++.++.++ +..... .+. ..
T Consensus 221 ~~i~lwd~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~--~d~~i~iwd~~~~--~~~~~l--~gH------~~ 285 (318)
T 4ggc_A 221 RHIRIWNV---CSGACLSAVDAHSQVCSILWSPHYKELISGHGF--AQNQLVIWKYPTM--AKVAEL--KGH------TS 285 (318)
T ss_dssp CEEEEEET---TTCCEEEEEECSSCEEEEEEETTTTEEEEEECT--TTCCEEEEETTTC--CEEEEE--CCC------SS
T ss_pred CEEEEEec---ccccccccccceeeeeeeeecccccceEEEEEc--CCCEEEEEECCCC--cEEEEE--cCC------CC
Confidence 34556665 444444333343444567899999998876531 2356778888766 333222 221 12
Q ss_pred Cc--eeeCCCCCEEEEEE
Q 011049 98 PM--MTRTSTGTNVIAKI 113 (494)
Q Consensus 98 ~~--~~~spDG~~i~~~~ 113 (494)
++ +.|||||+.|+-.+
T Consensus 286 ~V~~l~~spdg~~l~S~s 303 (318)
T 4ggc_A 286 RVLSLTMSPDGATVASAA 303 (318)
T ss_dssp CEEEEEECTTSSCEEEEE
T ss_pred CEEEEEEcCCCCEEEEEe
Confidence 22 34999999877543
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=87.97 E-value=2.7 Score=38.91 Aligned_cols=42 Identities=10% Similarity=-0.021 Sum_probs=26.1
Q ss_pred CccceeeeccCCCCCCCCCe-eccccccc---cccceecCCCceEEEEe
Q 011049 15 SPRDIIYTQPAEPAEGEKPE-ILHKLDLR---FRSVSWCDDSLALVNET 59 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~-~lt~~~~~---~~~p~wspDg~~i~f~~ 59 (494)
+..+.|-++|+ ++|+.. .+..+... ....+|||||+.++..+
T Consensus 200 S~D~TIkIWDl---~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s 245 (356)
T 2w18_A 200 TIMNNIVIWNL---KTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLS 245 (356)
T ss_dssp ETTSEEEEEET---TTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC
T ss_pred cCCCcEEEEEC---CCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEec
Confidence 55678889999 767643 34322211 12336999999887654
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=87.79 E-value=15 Score=33.10 Aligned_cols=59 Identities=14% Similarity=0.160 Sum_probs=33.9
Q ss_pred cceecC-CCceEEEEeeee--------------ccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEE
Q 011049 45 SVSWCD-DSLALVNETWYK--------------TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNV 109 (494)
Q Consensus 45 ~p~wsp-Dg~~i~f~~~~~--------------~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i 109 (494)
..++.| ||+ |++..... .....||+++.+++ +.+.+.... ..|.. +.++|||+.|
T Consensus 130 ~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~--~~~~~~~~~-----~~p~g--ia~~~dg~~l 199 (322)
T 2fp8_A 130 AVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK--ETTLLLKEL-----HVPGG--AEVSADSSFV 199 (322)
T ss_dssp EEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT--EEEEEEEEE-----SCCCE--EEECTTSSEE
T ss_pred eEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCCCC--EEEEeccCC-----ccCcc--eEECCCCCEE
Confidence 467889 885 55543211 11367999998876 444332211 11222 3389999977
Q ss_pred EEEE
Q 011049 110 IAKI 113 (494)
Q Consensus 110 ~~~~ 113 (494)
++..
T Consensus 200 yv~d 203 (322)
T 2fp8_A 200 LVAE 203 (322)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7764
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=87.78 E-value=14 Score=32.76 Aligned_cols=55 Identities=13% Similarity=0.042 Sum_probs=31.1
Q ss_pred CccceeeeccCCCCCCCCCee---ccccccccccceecCC--CceEEEEeeeeccceEEEEEcCCCC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEI---LHKLDLRFRSVSWCDD--SLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~---lt~~~~~~~~p~wspD--g~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
+..+.|.++++ ..++... +..........+|+|| |+.|+-.+ . ...|.+.++..+
T Consensus 74 s~D~~v~iWd~---~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s-~---d~~v~~wd~~~~ 133 (297)
T 2pm7_B 74 SYDGKVMIWKE---ENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVAS-S---DGKVSVVEFKEN 133 (297)
T ss_dssp ETTTEEEEEEB---SSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEE-T---TSEEEEEEBCSS
T ss_pred cCCCEEEEEEc---CCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEE-C---CCcEEEEEecCC
Confidence 34567778887 5443222 2223344557789998 77766543 2 334556666543
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=87.77 E-value=5.7 Score=34.90 Aligned_cols=37 Identities=11% Similarity=0.150 Sum_probs=27.6
Q ss_pred ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCC
Q 011049 36 LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 75 (494)
Q Consensus 36 lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~ 75 (494)
|..-....++.+|.||++.|+.+.+. ...|+.+++++
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~---~~~I~~ld~~g 58 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINK---PAAIVEMTTNG 58 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEET---TEEEEEEETTC
T ss_pred CCCcccCcceeEEeCCCCEEEEEECC---CCeEEEEeCCC
Confidence 33333456789999999888877654 57899999984
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=87.09 E-value=9.9 Score=33.47 Aligned_cols=29 Identities=7% Similarity=-0.135 Sum_probs=18.9
Q ss_pred ccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 44 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
...+++|||+ |++ +.. ....|++++.++.
T Consensus 167 ~~i~~~~~g~-l~v-~~~--~~~~i~~~~~~g~ 195 (286)
T 1q7f_A 167 NGVVVNDKQE-IFI-SDN--RAHCVKVFNYEGQ 195 (286)
T ss_dssp EEEEECSSSE-EEE-EEG--GGTEEEEEETTCC
T ss_pred EEEEECCCCC-EEE-EEC--CCCEEEEEcCCCC
Confidence 4567999997 443 322 1457889987653
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=86.71 E-value=4.9 Score=37.01 Aligned_cols=68 Identities=7% Similarity=-0.067 Sum_probs=38.0
Q ss_pred ceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEee
Q 011049 138 FLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQIT 210 (494)
Q Consensus 138 ~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt 210 (494)
.|.++|+++++..+.+....... ...+.-+...++++++.++++..+......|+++++++++..++.
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~-----~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPIT-----LSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTS-----CTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEEC
T ss_pred eEEEEECCCCeEEEEEECChhhc-----ccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEe
Confidence 58999999887554443221100 000001223566666677766543223467999998877765543
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=86.55 E-value=6.1 Score=37.53 Aligned_cols=118 Identities=12% Similarity=0.086 Sum_probs=62.4
Q ss_pred ecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEcc
Q 011049 48 WCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNG 127 (494)
Q Consensus 48 wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~ 127 (494)
|+||++.|+..+. ...|.+.++..+ +............ .--.+.|+|||+.++....
T Consensus 178 ~~~~~~~l~~~~~----d~~i~iwd~~~~--~~~~~~~~~~h~~----~v~~~~~s~~~~~l~s~~~------------- 234 (437)
T 3gre_A 178 VNEEKSLLVALTN----LSRVIIFDIRTL--ERLQIIENSPRHG----AVSSICIDEECCVLILGTT------------- 234 (437)
T ss_dssp ECSSCEEEEEEET----TSEEEEEETTTC--CEEEEEECCGGGC----CEEEEEECTTSCEEEEEET-------------
T ss_pred EcCCCCEEEEEeC----CCeEEEEeCCCC--eeeEEEccCCCCC----ceEEEEECCCCCEEEEEcC-------------
Confidence 6788887776542 457888888766 4333333210110 0112448999998876541
Q ss_pred CCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCce
Q 011049 128 RGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKS 206 (494)
Q Consensus 128 ~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~ 206 (494)
++ .+.++|+.+++....+..... .....+ .-.+.+++++..++ +.. .-..+.++++.+++.
T Consensus 235 -----dg---~i~iwd~~~~~~~~~~~~~~~---~~v~~~---~~~~~~s~~~~~l~-s~~---~dg~i~iwd~~~~~~ 295 (437)
T 3gre_A 235 -----RG---IIDIWDIRFNVLIRSWSFGDH---APITHV---EVCQFYGKNSVIVV-GGS---SKTFLTIWNFVKGHC 295 (437)
T ss_dssp -----TS---CEEEEETTTTEEEEEEBCTTC---EEEEEE---EECTTTCTTEEEEE-EES---TTEEEEEEETTTTEE
T ss_pred -----CC---eEEEEEcCCccEEEEEecCCC---CceEEE---EeccccCCCccEEE-EEc---CCCcEEEEEcCCCcE
Confidence 12 388889888765554432211 000111 00125566665443 332 234688888876653
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=86.16 E-value=2 Score=38.64 Aligned_cols=84 Identities=8% Similarity=0.053 Sum_probs=42.2
Q ss_pred cceeeeccCCCCCCCCC-----eeccccccccccceecCCC---ceEEEEeeeeccceEEEEEcCCCCCCCce-Eeeecc
Q 011049 17 RDIIYTQPAEPAEGEKP-----EILHKLDLRFRSVSWCDDS---LALVNETWYKTSQTRTWLVCPGSKDVAPR-VLFDRV 87 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~-----~~lt~~~~~~~~p~wspDg---~~i~f~~~~~~~~~~~~~~~~~~g~~~~~-~lt~~~ 87 (494)
.+.|.++|+ ..++. ..+..........+|+||+ +.|+-.+ .++ .-.||-++...+ ... .+....
T Consensus 179 D~~v~lwd~---~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s-~D~-~v~iWd~~~~~~--~~~~~~~~~~ 251 (297)
T 2pm7_B 179 DNLVKIWKY---NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVS-QDR-TCIIWTQDNEQG--PWKKTLLKEE 251 (297)
T ss_dssp TSCEEEEEE---ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE-TTS-CEEEEEESSTTS--CCEEEESSSS
T ss_pred CCcEEEEEE---cCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEE-CCC-cEEEEEeCCCCC--ccceeeeecc
Confidence 456777776 43331 1233333445678899996 5555443 333 345665543222 212 222111
Q ss_pred cccccCCCCCC--ceeeCCCCCEEEEEE
Q 011049 88 FENVYSDPGSP--MMTRTSTGTNVIAKI 113 (494)
Q Consensus 88 ~~~~~~~~~~~--~~~~spDG~~i~~~~ 113 (494)
.. ..+ .+.|||||+.|+...
T Consensus 252 ~~------~~~v~~~~~s~~g~~las~~ 273 (297)
T 2pm7_B 252 KF------PDVLWRASWSLSGNVLALSG 273 (297)
T ss_dssp CC------SSCEEEEEECSSSCCEEEEE
T ss_pred cC------CCcEEEEEECCCCCEEEEEc
Confidence 11 122 234999999887654
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=86.12 E-value=30 Score=34.81 Aligned_cols=121 Identities=7% Similarity=-0.007 Sum_probs=62.0
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEE
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYIL 124 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~ 124 (494)
+.++.+.++.|+++ + .....|.+++++|. ..+.|..... ..|...+ ..|...+|+|+-..
T Consensus 396 GlAvD~~~~~lY~t-D--~~~~~I~v~~~~G~--~~~~l~~~~l----~~P~~ia--vdp~~G~ly~tD~g--------- 455 (619)
T 3s94_A 396 GIAVDWVARNLYWT-D--TGTDRIEVTRLNGT--MRKILISEDL----EEPRAIV--LDPMVGYMYWTDWG--------- 455 (619)
T ss_dssp EEEEETTTTEEEEE-E--TTTTEEEEEETTSC--SCEEEECTTC----CSEEEEE--EETTTTEEEEEECS---------
T ss_pred ceEEecccCcEEEE-e--CCCCcEEEEeCCCC--eEEEEEECCC----CCeeeEE--EEcCCCcEEEecCC---------
Confidence 45565556666654 2 22568999999876 4455543211 1122222 56664466665421
Q ss_pred EccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCC
Q 011049 125 LNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 204 (494)
Q Consensus 125 ~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~ 204 (494)
..+.|++.++++...+.+....-. .+. ...++++++++++.... ...|+.+++++.
T Consensus 456 ----------~~~~I~r~~~dG~~~~~l~~~~l~----~P~-------GlalD~~~~~LY~aD~~---~~~I~~~~~dG~ 511 (619)
T 3s94_A 456 ----------EIPKIERAALDGSDRVVLVNTSLG----WPN-------GLALDYDEGKIYWGDAK---TDKIEVMNTDGT 511 (619)
T ss_dssp ----------SSCEEEEEETTSCSCEEEECSSCS----CEE-------EEEEETTTTEEEEEETT---TTEEEEEESSSC
T ss_pred ----------CCCEEEEEccCCCccEEEEeCCCC----CCe-------eeEEcccCCEEEEEECC---CCEEEEEecCCC
Confidence 123477777776544444321100 011 12455556666665432 246777777665
Q ss_pred ceeEe
Q 011049 205 KSSQI 209 (494)
Q Consensus 205 ~~~~l 209 (494)
..+.+
T Consensus 512 ~~~~~ 516 (619)
T 3s94_A 512 GRRVL 516 (619)
T ss_dssp CCEEE
T ss_pred ceEEE
Confidence 55544
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=86.09 E-value=2.6 Score=41.67 Aligned_cols=83 Identities=11% Similarity=0.001 Sum_probs=42.1
Q ss_pred ccceeeeccCCCCCCC-CCee-ccccccccccc--eecCCC-ceEEEEeeeeccceEEEEEcCCCCCCCce-Eeeecccc
Q 011049 16 PRDIIYTQPAEPAEGE-KPEI-LHKLDLRFRSV--SWCDDS-LALVNETWYKTSQTRTWLVCPGSKDVAPR-VLFDRVFE 89 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~-~~~~-lt~~~~~~~~p--~wspDg-~~i~f~~~~~~~~~~~~~~~~~~g~~~~~-~lt~~~~~ 89 (494)
..+.|.++|+ ..+ .+.. +.......... .|+||| +.|+-. ..+ ..+.+-|+..+ +.. .+......
T Consensus 285 ~DgtV~lWD~---~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~-S~D---~tvklWD~~~~--~~~~~~~~~~~~ 355 (524)
T 2j04_B 285 KNGFVAEFDL---TDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTV-AVD---GYFYIFNPKDI--ATTKTTVSRFRG 355 (524)
T ss_dssp TTSEEEEEET---TBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEE-ETT---SEEEEECGGGH--HHHCEEEEECSC
T ss_pred CCCEEEEEEC---CCCCCceEEeecccccEEEEEEEcCCCCCeEEEEe-ccC---CeEEEEECCCC--Cccccccccccc
Confidence 4467888888 433 3332 33334444555 689998 554443 333 34555666543 221 22211110
Q ss_pred cccCCCCCCceeeCCCCCEEEEE
Q 011049 90 NVYSDPGSPMMTRTSTGTNVIAK 112 (494)
Q Consensus 90 ~~~~~~~~~~~~~spDG~~i~~~ 112 (494)
. .-..+.|||||+.++..
T Consensus 356 ~-----~v~~v~fsp~~~~l~s~ 373 (524)
T 2j04_B 356 S-----NLVPVVYCPQIYSYIYS 373 (524)
T ss_dssp C-----SCCCEEEETTTTEEEEE
T ss_pred C-----cccceEeCCCcCeEEEe
Confidence 0 01124599999976544
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=86.05 E-value=1.7 Score=41.59 Aligned_cols=55 Identities=5% Similarity=-0.169 Sum_probs=36.0
Q ss_pred CccceeeeccCCCCCCCCCeeccc---cccccccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHK---LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~---~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
+..+.|.++|+ ..++...... ........+|+|||+.|+..+. ...|.+.++..+
T Consensus 189 ~~d~~i~iwd~---~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~----dg~i~iwd~~~~ 246 (437)
T 3gre_A 189 TNLSRVIIFDI---RTLERLQIIENSPRHGAVSSICIDEECCVLILGTT----RGIIDIWDIRFN 246 (437)
T ss_dssp ETTSEEEEEET---TTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEET----TSCEEEEETTTT
T ss_pred eCCCeEEEEeC---CCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcC----CCeEEEEEcCCc
Confidence 34578999998 6565544332 2345567889999998776542 345777777654
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=85.84 E-value=11 Score=34.24 Aligned_cols=29 Identities=14% Similarity=-0.060 Sum_probs=19.1
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
..+++||+..|+++ .. .+..|.++++++|
T Consensus 200 gia~d~~~g~l~v~-d~--~~~~I~~~~~~~G 228 (329)
T 3fvz_A 200 SLALVPHLDQLCVA-DR--ENGRIQCFKTDTK 228 (329)
T ss_dssp EEEEETTTTEEEEE-ET--TTTEEEEEETTTC
T ss_pred EEEEECCCCEEEEE-EC--CCCEEEEEECCCC
Confidence 46789996555544 32 2467888888855
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=85.31 E-value=18 Score=31.33 Aligned_cols=29 Identities=10% Similarity=0.138 Sum_probs=20.3
Q ss_pred cccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 43 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 43 ~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
....+++|||+ |++.. . ...|++++.+++
T Consensus 69 p~~i~~~~~g~-l~v~~-~---~~~i~~~d~~~~ 97 (270)
T 1rwi_B 69 PQGLAVDGAGT-VYVTD-F---NNRVVTLAAGSN 97 (270)
T ss_dssp CCCEEECTTCC-EEEEE-T---TTEEEEECTTCS
T ss_pred cceeEECCCCC-EEEEc-C---CCEEEEEeCCCc
Confidence 34678999998 44442 2 357999998875
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=85.17 E-value=3.1 Score=34.83 Aligned_cols=53 Identities=9% Similarity=0.088 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCC----CceeEEEeCCC
Q 011049 323 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP----HLFCCGIARSG 377 (494)
Q Consensus 323 ~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p----~~~~a~v~~~~ 377 (494)
..+.|+...|+...++- -..||+|.|.|.|+.++..++..-| +++++++++.-
T Consensus 78 ~G~~~~~~~i~~~~~~C--P~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGd 134 (197)
T 3qpa_A 78 AAIREMLGLFQQANTKC--PDATLIAGGYXQGAALAAASIEDLDSAIRDKIAGTVLFGY 134 (197)
T ss_dssp HHHHHHHHHHHHHHHHC--TTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESC
T ss_pred HHHHHHHHHHHHHHHhC--CCCcEEEEecccccHHHHHHHhcCCHhHHhheEEEEEeeC
Confidence 45667777777666652 2379999999999999988776654 67888887654
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=85.14 E-value=5.3 Score=35.21 Aligned_cols=110 Identities=12% Similarity=-0.097 Sum_probs=61.6
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEE
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYIL 124 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~ 124 (494)
+..|+ ++.|+.++-. ..+|.++|++++... +.+ -+... +-...+++|.+|+....
T Consensus 59 GL~~~--~~~Ly~stG~---~g~v~~iD~~Tgkv~-~~~--l~~~~-------FgeGit~~g~~Ly~ltw---------- 113 (268)
T 3nok_A 59 GLVFH--QGHFFESTGH---QGTLRQLSLESAQPV-WME--RLGNI-------FAEGLASDGERLYQLTW---------- 113 (268)
T ss_dssp EEEEE--TTEEEEEETT---TTEEEECCSSCSSCS-EEE--ECTTC-------CEEEEEECSSCEEEEES----------
T ss_pred eEEEE--CCEEEEEcCC---CCEEEEEECCCCcEE-eEE--CCCCc-------ceeEEEEeCCEEEEEEc----------
Confidence 45565 4565554322 235999999987322 222 11111 11114678887755431
Q ss_pred EccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCC
Q 011049 125 LNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 204 (494)
Q Consensus 125 ~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~ 204 (494)
.. ..++++|.++++...-....+. .-.+++|+++++.+. + ...|+.+|.++.
T Consensus 114 --------~~--~~v~V~D~~Tl~~~~ti~~~~e--------------GwGLt~Dg~~L~vSd-G---s~~l~~iDp~T~ 165 (268)
T 3nok_A 114 --------TE--GLLFTWSGMPPQRERTTRYSGE--------------GWGLCYWNGKLVRSD-G---GTMLTFHEPDGF 165 (268)
T ss_dssp --------SS--CEEEEEETTTTEEEEEEECSSC--------------CCCEEEETTEEEEEC-S---SSEEEEECTTTC
T ss_pred --------cC--CEEEEEECCcCcEEEEEeCCCc--------------eeEEecCCCEEEEEC-C---CCEEEEEcCCCC
Confidence 11 2489999999876543332221 125567887776653 2 457999998876
Q ss_pred cee
Q 011049 205 KSS 207 (494)
Q Consensus 205 ~~~ 207 (494)
+..
T Consensus 166 ~v~ 168 (268)
T 3nok_A 166 ALV 168 (268)
T ss_dssp CEE
T ss_pred eEE
Confidence 543
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=84.61 E-value=8.3 Score=35.79 Aligned_cols=157 Identities=8% Similarity=-0.025 Sum_probs=0.0
Q ss_pred CCCCCCCCccceeeeccCCCCC--CCCCeeccccc-------cccccceecC--CCceEEEEeeee--ccceEEEEEcCC
Q 011049 8 GDANVEVSPRDIIYTQPAEPAE--GEKPEILHKLD-------LRFRSVSWCD--DSLALVNETWYK--TSQTRTWLVCPG 74 (494)
Q Consensus 8 ~~~~~~~~~~~~i~~~~~~~~~--~~~~~~lt~~~-------~~~~~p~wsp--Dg~~i~f~~~~~--~~~~~~~~~~~~ 74 (494)
|-.+++-...|.||++|. + ++++++|.... ..-.+....+ ||+.-+|+.+.. ...-+++.++.+
T Consensus 73 g~~~~~~~~~G~I~~~d~---~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~ 149 (355)
T 3sre_A 73 GIMSFDPDKSGKILLMDL---NEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEE 149 (355)
T ss_dssp ---------CCEEEEEET---TSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETT
T ss_pred CCcccCCCCCCeEEEEec---CCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECC
Q ss_pred CCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCC----------CCCCCceEeeec
Q 011049 75 SKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTP----------EGNIPFLDLFDI 144 (494)
Q Consensus 75 ~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~----------~~~~~~l~~~d~ 144 (494)
++ ..+.+....+ ..+..|+... ..+||++.+-.... .+. ......++++|.
T Consensus 150 ~~--~~~~~~~~~g-~~~~~pND~~--v~~~G~fyvt~~~~--------------ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 150 EK--SLLHLKTIRH-KLLPSVNDIV--AVGPEHFYATNDHY--------------FIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp TT--EEEEEEEECC-TTCSSEEEEE--EEETTEEEEEESCS--------------CSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred CC--EEEEEecccc-CCCCCCceEE--EeCCCCEEecCCcE--------------eCCcccccchhhccCCccEEEEEEC
Q ss_pred CCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 145 NTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 145 ~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
++.+.+...-.. .+...||||++.+++..+. ...|++++.+.
T Consensus 211 --~~~~~~~~~l~~------------pNGia~spDg~~lYvadt~---~~~I~~~~~~~ 252 (355)
T 3sre_A 211 --NDVRVVAEGFDF------------ANGINISPDGKYVYIAELL---AHKIHVYEKHA 252 (355)
T ss_dssp --TCCEEEEEEESS------------EEEEEECTTSSEEEEEEGG---GTEEEEEEECT
T ss_pred --CeEEEeecCCcc------------cCcceECCCCCEEEEEeCC---CCeEEEEEECC
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=84.44 E-value=25 Score=32.39 Aligned_cols=88 Identities=13% Similarity=-0.007 Sum_probs=45.9
Q ss_pred cceeeeccCCCCCCCCCeecc-------ccccccccceecCC---CceEEEEeeeeccceEEEEEcCCCCC------CCc
Q 011049 17 RDIIYTQPAEPAEGEKPEILH-------KLDLRFRSVSWCDD---SLALVNETWYKTSQTRTWLVCPGSKD------VAP 80 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt-------~~~~~~~~p~wspD---g~~i~f~~~~~~~~~~~~~~~~~~g~------~~~ 80 (494)
.|+|++++. ++++.+.+. .+.......+++|| ..+|++...... .++|.++.+++++ .+.
T Consensus 52 ~G~I~~v~~---~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~-~~~v~R~~~~~~~~~~~~~~~~ 127 (347)
T 3das_A 52 EATITRVDA---KTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS-DNRIVRMLYDEKKPSGEQLGAP 127 (347)
T ss_dssp TCEEEEECT---TTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS-SEEEEEEEBCTTSCTTCCBCCC
T ss_pred CCEEEEEEC---CCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC-CCEEEEEEeCCCCcccccCCCc
Confidence 678888876 555544332 22223346789997 345544322222 4689998877631 123
Q ss_pred eEeee-cccc-cccCCCCCCceeeCCCCCEEEEEE
Q 011049 81 RVLFD-RVFE-NVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 81 ~~lt~-~~~~-~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
+.|.. .+.. ..+ .. .+.+.|||+ |++..
T Consensus 128 ~~i~~~~p~~~~H~--g~--~l~fgpDG~-Lyvt~ 157 (347)
T 3das_A 128 DTVFRGIPKGVIHN--GG--RIAFGPDKM-LYAGT 157 (347)
T ss_dssp EEEEEEECCCSSCC--CC--CEEECTTSC-EEEEC
T ss_pred EEEEEcCCCCCCcc--Cc--cccCCCCCC-EEEEE
Confidence 44433 2211 111 12 233899995 66654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 494 | ||||
| d1vlqa_ | 322 | c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Therm | 1e-18 | |
| d1xfda2 | 258 | c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-li | 4e-17 | |
| d2d81a1 | 318 | c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymer | 2e-16 | |
| d2gzsa1 | 265 | c.69.1.38 (A:41-305) Enterobactin and salmochelin | 5e-15 | |
| d2bgra2 | 258 | c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26 | 2e-14 | |
| d1qfma2 | 280 | c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-term | 1e-13 | |
| d3c8da2 | 246 | c.69.1.2 (A:151-396) Enterochelin esterase, cataly | 2e-12 | |
| d1wb4a1 | 273 | c.69.1.2 (A:803-1075) Feruloyl esterase domain of | 6e-12 | |
| d2jbwa1 | 360 | c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine h | 4e-11 | |
| d1l7aa_ | 318 | c.69.1.25 (A:) Cephalosporin C deacetylase {Bacill | 5e-11 | |
| d2hu7a2 | 260 | c.69.1.33 (A:322-581) Acylamino-acid-releasing enz | 5e-11 | |
| d1mpxa2 | 381 | c.69.1.21 (A:24-404) Alpha-amino acid ester hydrol | 5e-11 | |
| d2b9va2 | 385 | c.69.1.21 (A:50-434) Alpha-amino acid ester hydrol | 9e-10 | |
| d1lnsa3 | 405 | c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopep | 1e-09 | |
| d1jjfa_ | 255 | c.69.1.2 (A:) Feruloyl esterase domain of the cell | 2e-08 | |
| d1pv1a_ | 299 | c.69.1.34 (A:) Hypothetical esterase YJL068C {Bake | 2e-08 | |
| d1sfra_ | 288 | c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculo | 5e-07 | |
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 6e-07 | |
| d1jjia_ | 311 | c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeogl | 5e-06 | |
| d1r88a_ | 267 | c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tu | 5e-06 | |
| d1uxoa_ | 186 | c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus | 4e-05 | |
| d1vkha_ | 263 | c.69.1.32 (A:) Putative serine hydrolase Ydr428c { | 1e-04 | |
| d1dqza_ | 280 | c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculo | 2e-04 | |
| d1qlwa_ | 318 | c.69.1.15 (A:) A novel bacterial esterase {Alcalig | 2e-04 | |
| d1dina_ | 233 | c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas | 3e-04 | |
| d1ju3a2 | 347 | c.69.1.21 (A:5-351) Bacterial cocaine esterase N-t | 5e-04 | |
| d1lzla_ | 317 | c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [Ta | 0.001 |
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Score = 84.4 bits (207), Expect = 1e-18
Identities = 37/290 (12%), Positives = 79/290 (27%), Gaps = 34/290 (11%)
Query: 213 PHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFW--------AYPE 264
L +++ + + G + L +P ++ LPC+ +P
Sbjct: 45 RMESH-LKTVEAYDVTFSGYRGQRIKGWLLVPKL----EEEKLPCVVQYIGYNGGRGFPH 99
Query: 265 DYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQL 324
D+ + G + + + + + G P + ++
Sbjct: 100 DWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRV 159
Query: 325 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN---- 380
+ A AVE D RI + G S G + + A + +
Sbjct: 160 FTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSKKAKALLCDVPFLCHFRRA 219
Query: 381 KTLTPFGFQTEFR--------TLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLF 432
L E + A + K P L G +D+
Sbjct: 220 VQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNIC--P 277
Query: 433 PMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482
P ++ G + + P+ +H + + ++L+K
Sbjct: 278 PSTVFAAYNYYAGP---KEIRIYPYNNHEGGGSFQAVEQV----KFLKKL 320
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.0 bits (193), Expect = 4e-17
Identities = 37/258 (14%), Positives = 75/258 (29%), Gaps = 21/258 (8%)
Query: 233 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLI 292
D L + P + + P L + +F +++
Sbjct: 11 DDYNLPMQILKPATFTDTT--HYPLLLVVDG--------TPGSQSVAEKFEVSWE--TVM 58
Query: 293 FLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVG 349
+ V+ +G KL ++ R AV +++ D +R+AV
Sbjct: 59 VSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVF 118
Query: 350 GHSYGAFMTAHLLAHAP----HLFCCGIARSG-SYNKTLTPFGFQTEFRTLWEATNVYIE 404
G YG +++ ++L F CG A S + K + Y
Sbjct: 119 GKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAFSERYLGLHGLDNRAYEM 178
Query: 405 MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA 464
+ +++ +I D+ + L A L + P E H + +
Sbjct: 179 TKVAHRVSALEEQQFLIIHPTADEK-IHFQHTAELITQLIRGKANYSLQIYPDESHYFTS 237
Query: 465 RENVMHVIWETDRWLQKY 482
H+ + +
Sbjct: 238 SSLKQHLYRSIINFFVEC 255
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Score = 77.8 bits (191), Expect = 2e-16
Identities = 23/132 (17%), Positives = 40/132 (30%), Gaps = 12/132 (9%)
Query: 341 ADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG--------SYNKTLTPFGFQTEF 392
+P+ ++V G + G +M A L +F G + T +
Sbjct: 8 VNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCMYNGYPSI 67
Query: 393 RTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG--HGALS 450
T + + AN ++ I + G D VG P + L + A
Sbjct: 68 TTPTANMKSWSGNQIASVANLGQRKIYMWTGSSDTTVG--PNVMNQLKAQLGNFDNSANV 125
Query: 451 RLVLLPFEHHVY 462
V H +
Sbjct: 126 SYVTTTGAVHTF 137
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} Length = 265 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Score = 72.7 bits (177), Expect = 5e-15
Identities = 28/258 (10%), Positives = 57/258 (22%), Gaps = 22/258 (8%)
Query: 225 EMIKYQRKDGV-PLTATLYLPPGYDQSKDGPLPCLFWAYPE---DYKSKDAAGQV-RGSP 279
+ DG +P + P L+ D + Q+ +P
Sbjct: 14 SATSFDSVDGTRHYRVWTAVPNTTAPAS--GYPILYMLDGNAVMDRLDDELLKQLSEKTP 71
Query: 280 NEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG-----DKLPNDRFVEQLVSSAEAAVEE 334
+ ++L F A P+ + +
Sbjct: 72 PVIVAVGYQTNLPFDLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPK 131
Query: 335 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRT 394
V + D R + GHSYG + + + S S + +
Sbjct: 132 VEQGLNIDRQRRGLWGHSYGGLFVLDSWLSSSYFRSY-YSASPSLGRGYDALLSRVTAVE 190
Query: 395 LWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVL 454
+ ++ + + E + LK G +
Sbjct: 191 PLQFCTKHLAIM-------EGSATQGDNRETHAVG--VLSKIHTTLTILKDKGVNAVFWD 241
Query: 455 LPFEHHVYAARENVMHVI 472
P H + +
Sbjct: 242 FPNLGHGPMFNASFRQAL 259
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 71.4 bits (173), Expect = 2e-14
Identities = 51/266 (19%), Positives = 89/266 (33%), Gaps = 23/266 (8%)
Query: 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFS 283
+ + + + + LPP +D+SK P L Y A + + F
Sbjct: 3 SKKLDFIILNETKFWYQMILPPHFDKSK--KYPLLLDVY--------AGPCSQKADTVFR 52
Query: 284 GMTPTSSLIFLARRFAVLAGPSIPIIGEG----DKLPNDRFVEQLVSSAEAAVEEVVRRG 339
T + ++A G N R V A + + G
Sbjct: 53 LNWAT---YLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMG 109
Query: 340 VADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEAT 399
D RIA+ G SYG ++T+ +L +F CGIA + + + L
Sbjct: 110 FVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPE 169
Query: 400 NVYIEMSPITHANKIKK----PILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLL 455
+ T ++ + L+IHG DD V Q+ + AL G + +
Sbjct: 170 DNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNV--HFQQSAQISKALVDVGVDFQAMWY 227
Query: 456 PFEHHVYAARENVMHVIWETDRWLQK 481
E H A+ H+ ++++
Sbjct: 228 TDEDHGIASSTAHQHIYTHMSHFIKQ 253
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 280 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 68.7 bits (166), Expect = 1e-13
Identities = 27/270 (10%), Positives = 54/270 (20%), Gaps = 16/270 (5%)
Query: 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYP----EDYKSKDAAGQVRGSPN 280
I Y KDG + + G DG P + Y + + +
Sbjct: 8 VQIFYPSKDGTKIPMFIVHKKGIK--LDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHM 65
Query: 281 EFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGV 340
G D +
Sbjct: 66 GGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSN 125
Query: 341 ADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATN 400
F + G T + +
Sbjct: 126 GGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYGCSDSKQHFEWLIKYS 185
Query: 401 VYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFE-- 458
+ + +L++ + DD+V P+ + +F L+ SR P
Sbjct: 186 PLHNVKLPEADDIQYPSMLLLTADHDDRV--VPLHSLKFIATLQYIVGRSRKQNNPLLIH 243
Query: 459 ------HHVYAARENVMHVIWETDRWLQKY 482
H V+ + + ++ +
Sbjct: 244 VDTKAGHGAGKPTAKVIEEVSDMFAFIARC 273
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} Length = 246 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Score = 64.6 bits (156), Expect = 2e-12
Identities = 34/264 (12%), Positives = 64/264 (24%), Gaps = 31/264 (11%)
Query: 217 PTLASLQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQV 275
P + + I ++ + ++ P E + V
Sbjct: 8 PQAPEIPAKEIIWKSERLKNSRRVWIFTTGDVT---AEERPLAVLLDGEFWAQSMPVWPV 64
Query: 276 RGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEV 335
S + P VL + N F + V+ +
Sbjct: 65 LTSLTHRQQLPPAV---------YVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKVI 115
Query: 336 VRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTL 395
R V G S+G + H P F C +++SGSY
Sbjct: 116 APFSD-RADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRG---------- 164
Query: 396 WEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLL 455
+ V +E + I++ G + + + + L +
Sbjct: 165 GQQEGVLLEKLKAGEVSAEGLRIVLEAGIREPMI---MRANQALYAQLHPIKESIFWRQV 221
Query: 456 PFEHHVYAARENVMHVIWETDRWL 479
H R +M + L
Sbjct: 222 DGGHDALCWRGGLMQGL----IDL 241
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Score = 64.0 bits (154), Expect = 6e-12
Identities = 34/269 (12%), Positives = 66/269 (24%), Gaps = 21/269 (7%)
Query: 212 FPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDA 271
+ +P P + K Y +G + +YLP GYD +K + +
Sbjct: 17 YLNPCPQAGRIVK--ETYTGING-TKSLNVYLPYGYDPNK--KYNIFYLMHGGGENENTI 71
Query: 272 AGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAA 331
N L L G + + + + A
Sbjct: 72 FSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQNFYQEFRQNVIPFVESKYSTYA 131
Query: 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTE 391
+ A GG + G T +++ + + SG Y +P
Sbjct: 132 ESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYWYGNSP------ 185
Query: 392 FRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGL------FPMQAERFFDALKG 445
+ N E + +K + + G D F
Sbjct: 186 ----QDKANSIAEAINRSGLSKREYFVFAATGSEDIAYANMNPQIEAMKALPHFDYTSDF 241
Query: 446 HGALSRLVLLPFEHHVYAARENVMHVIWE 474
++ P H + + ++
Sbjct: 242 SKGNFYFLVAPGATHWWGYVRHYIYDALP 270
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 360 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Score = 62.3 bits (150), Expect = 4e-11
Identities = 44/261 (16%), Positives = 76/261 (29%), Gaps = 43/261 (16%)
Query: 233 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLI 292
DG+P+ + +P G GP P + + + E M +
Sbjct: 114 DGIPMPVYVRIPEG-----PGPHPAVIMLGGLE-----------STKEESFQMEN----L 153
Query: 293 FLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHS 352
L R A P GE + A V+ + + I V G S
Sbjct: 154 VLDRGMATAT-FDGPGQGEMFEYKRIA--GDYEKYTSAVVDLLTKLEAIRNDAIGVLGRS 210
Query: 353 YGAFMTAHLLAHAPHLFCCGIARSGSYNKTL---------TPFGFQTEFRTLWEA-TNVY 402
G A P I+ G + + + ++ TL EA +V+
Sbjct: 211 LGGNYALKSAACEPR-LAACISWGGFSDLDYWDLETPLTKESWKYVSKVDTLEEARLHVH 269
Query: 403 IEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV- 461
+ ++I P I+HG D+V + + + LV+ H
Sbjct: 270 AALETRDVLSQIACPTYILHGV-HDEVP--LSFVDTVLELVPAEHL--NLVVEKDGDHCC 324
Query: 462 YAARENVMHVIWETDRWLQKY 482
+ + + WL
Sbjct: 325 HNLGIRPRLEMAD---WLYDV 342
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Score = 61.7 bits (148), Expect = 5e-11
Identities = 38/286 (13%), Positives = 83/286 (29%), Gaps = 32/286 (11%)
Query: 213 PHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAA 272
P YP ++ + Y+ +T +P +GP P + + +
Sbjct: 46 PVDYP-ADGVKVYRLTYKSFGNARITGWYAVPDK-----EGPHPAIVKYHGYNASYDGEI 99
Query: 273 GQVRG-SPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE-GDKLPNDRFVEQLVSSAEA 330
++ + + ++ + ++ G + + + A
Sbjct: 100 HEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVR 159
Query: 331 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG------------- 377
A+E + D +RI V G S G +T A +
Sbjct: 160 ALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDIPKAAVADYPYLSNFERAIDVALE 219
Query: 378 -SYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQA 436
Y + + F T +A + A+++K P+L+ G +D P
Sbjct: 220 QPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTP--PSTV 277
Query: 437 ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482
++ L+ L + + H Y E + ++
Sbjct: 278 FAAYNHLETKK---ELKVYRYFGHEYIP-----AFQTEKLAFFKQI 315
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Score = 61.1 bits (146), Expect = 5e-11
Identities = 40/265 (15%), Positives = 78/265 (29%), Gaps = 27/265 (10%)
Query: 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSG 284
++ + DG + + P P + + G P
Sbjct: 13 RLVWVESFDGSRVPTYVLESGR----APTPGPTVVLVH--------------GGPFAEDS 54
Query: 285 MTPTSSLIFLARRFAVLAGPSIPIIGE--GDKLPNDRFVEQLVSSAEAAVEEVVRRGVAD 342
+ + LA + P+ + + + R
Sbjct: 55 DSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGL 114
Query: 343 PSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG-----SYNKTLTPFGFQTEFRTLWE 397
S + + G+SYG +MT L P LF G+A + + +
Sbjct: 115 ASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDAAFRNFIEQLTGG 174
Query: 398 ATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPF 457
+ + SPI H ++IK+P+ +IH + D + R L G ++P
Sbjct: 175 SREIMRSRSPINHVDRIKEPLALIHPQNDSRT--PLKPLLRLMGELLARGKTFEAHIIPD 232
Query: 458 EHHVYAARENVMHVIWETDRWLQKY 482
H E+ + ++ +L
Sbjct: 233 AGHAINTMEDAVKILLPAVFFLATQ 257
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} Length = 381 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Score = 62.1 bits (149), Expect = 5e-11
Identities = 25/182 (13%), Positives = 53/182 (29%), Gaps = 18/182 (9%)
Query: 208 QITNFPHPYPTLAS-LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDY 266
IT P ++ K + +DGV L + LP G P + P D
Sbjct: 7 DITGKPFVAADASNDYIKREVMIPMRDGVKLHTVIVLPKG-----AKNAPIVLTRTPYDA 61
Query: 267 KSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP--------SIPIIGEGDKLPND 318
+ R + + +F+ + + ++ + P +
Sbjct: 62 ----SGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGDYVMTRPLRGPLN 117
Query: 319 RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378
+ A ++ +V+ ++ + G SY F L + + S
Sbjct: 118 PSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPM 177
Query: 379 YN 380
+
Sbjct: 178 ID 179
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} Length = 385 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Score = 57.8 bits (138), Expect = 9e-10
Identities = 23/174 (13%), Positives = 43/174 (24%), Gaps = 16/174 (9%)
Query: 215 PYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQ 274
P K + +DGV L + +P P L P +
Sbjct: 19 PTDQQRDYIKREVMVPMRDGVKLYTVIVIPKN-----ARNAPILLTRTP---YNAKGRAN 70
Query: 275 VRGSPNEFSGMTPTSSLIFLARRFAVLA--------GPSIPIIGEGDKLPNDRFVEQLVS 326
+ + P +F+ + + ++ P + +
Sbjct: 71 RVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQGDYVMTRPPHGPLNPTKTDETT 130
Query: 327 SAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 380
A V+ +V R+ + G SY F L S +
Sbjct: 131 DAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVD 184
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} Length = 405 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Score = 57.6 bits (138), Expect = 1e-09
Identities = 29/211 (13%), Positives = 53/211 (25%), Gaps = 53/211 (25%)
Query: 321 VEQLVSSAEAAVEEVVRRGVADP---SRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 377
++ L A A + ++A+ G SY M +A +G
Sbjct: 169 IDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAG 228
Query: 378 SYN----------------------------------------------KTLTPFGFQTE 391
+ +
Sbjct: 229 ISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLAEMTAAL 288
Query: 392 FRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSR 451
R + + + + + + +K+K +LI+HG D V P QA F+ AL G
Sbjct: 289 DRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVT--PEQAYNFWKALP-EGHAKH 345
Query: 452 LVLLPFEHHVYAARENVMHVIWETDRWLQKY 482
L H Y + + +
Sbjct: 346 AFLHRGAHI-YMNSWQSIDFSETINAYFVAK 375
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Score = 53.2 bits (126), Expect = 2e-08
Identities = 36/266 (13%), Positives = 68/266 (25%), Gaps = 29/266 (10%)
Query: 210 TNFPHPYPTLASLQKEMIKYQ-RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKS 268
+ + + Q I Y A +YLPPGY + K L+ +
Sbjct: 8 SGYDQVRNGVPRGQVVNISYFSTATNSTRPARVYLPPGYSKDK--KYSVLYLLHGIGGSE 65
Query: 269 KDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSA 328
D + + I + P I +G + + L+
Sbjct: 66 NDWFEGGGRAN-VIADNLIAEGKIKPLIIVTPNTNAAGPGIADGYENFTKDLLNSLIPYI 124
Query: 329 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGF 388
E+ D A+ G S G + ++ F S +
Sbjct: 125 ES-----NYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAP--------- 170
Query: 389 QTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGA 448
N + A + K + I G D +G +R + +
Sbjct: 171 -------NTYPNERLFPDGGKAAREKLKLLFIACGTNDSLIG----FGQRVHEYCVANNI 219
Query: 449 LSRLVLLPFEHHVYAARENVMHVIWE 474
L+ H + + + +
Sbjct: 220 NHVYWLIQGGGHDFNVWKPGLWNFLQ 245
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 53.3 bits (127), Expect = 2e-08
Identities = 32/238 (13%), Positives = 70/238 (29%), Gaps = 25/238 (10%)
Query: 234 GVPLTATLYLPPGYDQ---SKDGPLPCLFW---------------AYPEDYKSKDAAGQV 275
+ +YLP Y ++ +P +F+ + A
Sbjct: 25 KTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVF 84
Query: 276 RGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEV 335
+ + + + A + D ++L + ++ +
Sbjct: 85 PDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKN 144
Query: 336 VRRGVADPSRIAVGGHS---YGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEF 392
+ +A+ GHS YGA L ++ + A + N + P+G +
Sbjct: 145 GDVKLDFLDNVAITGHSMGGYGAICGY-LKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFK 203
Query: 393 RTLWEATNVYIEMSP---ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG 447
L E + P I + + ++IH D ++ E +A+K
Sbjct: 204 GYLGEEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDSDPFLEEHLKPELLLEAVKATS 261
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 48.8 bits (115), Expect = 5e-07
Identities = 24/175 (13%), Positives = 43/175 (24%), Gaps = 30/175 (17%)
Query: 328 AEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG 387
+ P+ AV G S A L + P F A SG + G
Sbjct: 103 TSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLD-PSQAMG 161
Query: 388 FQTEFRTLWEA-------------TNVYIEMSPITHANKIKK---PILIIHGEVDDKV-- 429
+ +A + P+ + K+ + + G
Sbjct: 162 PTLIGLAMGDAGGYKASDMWGPKEDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLG 221
Query: 430 ----------GLFPMQAERFFDALKGHGALSRLVLLPFE-HHVYAARENVMHVIW 473
G +F DA G + + P H + ++ +
Sbjct: 222 GNNLPAKFLEGFVRTSNIKFQDAYNAGGGHNGVFDFPDSGTHSWEYWGAQLNAMK 276
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 48.8 bits (115), Expect = 6e-07
Identities = 24/201 (11%), Positives = 47/201 (23%), Gaps = 30/201 (14%)
Query: 293 FLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHS 352
F V S+ +G ++ + +S + + I + S
Sbjct: 55 LSTNGFHVFRYDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTK---GTQNIGLIAAS 111
Query: 353 YGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-FGFQTEFRTLWEATNVY--------- 402
A + +++ F + TL GF + E N
Sbjct: 112 LSARVAYEVISDLELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGS 171
Query: 403 -------------IEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGAL 449
S + P++ DD V + ++
Sbjct: 172 EVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVK--QEEVYDMLAHIR--TGH 227
Query: 450 SRLVLLPFEHHVYAARENVMH 470
+L L H V+
Sbjct: 228 CKLYSLLGSSHDLGENLVVLR 248
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 45.9 bits (107), Expect = 5e-06
Identities = 29/162 (17%), Positives = 43/162 (26%), Gaps = 28/162 (17%)
Query: 341 ADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATN 400
DPS+I VGG S G + A + A I + E
Sbjct: 149 IDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSLLEFGEGLW 208
Query: 401 VY---------------------IEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERF 439
+ S I + P LII E D + E F
Sbjct: 209 ILDQKIMSWFSEQYFSREEDKFNPLASVIFADLENLPPALIITAEYD----PLRDEGEVF 264
Query: 440 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481
L+ G + +V H + N V+ + +
Sbjct: 265 GQMLRRAGVEASIVRYRGVLHGFI---NYYPVLKAARDAINQ 303
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 45.7 bits (107), Expect = 5e-06
Identities = 20/211 (9%), Positives = 52/211 (24%), Gaps = 17/211 (8%)
Query: 276 RGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEV 335
P+ + +T +++ LA + + P+ D + + + +
Sbjct: 37 NAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDGSKQWDTFLSAELPDWL 96
Query: 336 VRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTL 395
P A G + G + L A P F + SG +
Sbjct: 97 AANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLY-PSNTTTNGAIAAGM 155
Query: 396 WEA-------------TNVYIEMSPITHANKIKK---PILIIHGEVDDKVGLFPMQAERF 439
+ + P HA+ + + + + M +
Sbjct: 156 QQFGGVDTNGMWGAPQLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAA 215
Query: 440 FDALKGHGALSRLVLLPFEHHVYAARENVMH 470
++ + + + + +
Sbjct: 216 EAMGNSRMFYNQYRSVGGHNGHFDFPASGDN 246
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} Length = 186 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Score = 42.4 bits (98), Expect = 4e-05
Identities = 17/139 (12%), Positives = 29/139 (20%), Gaps = 15/139 (10%)
Query: 326 SSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP 385
E ++ + + HS G L H G
Sbjct: 44 PRLEDWLDTLSLYQHTLHENTYLVAHSLGCPAILRFLEHLQLRAALGGII--------LV 95
Query: 386 FGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG 445
GF TL + K +I + D V ++ +
Sbjct: 96 SGFAKSLPTLQMLDEFTQGSFDHQKIIESAKHRAVIASKDDQIV--PFSFSKDLAQQID- 152
Query: 446 HGALSRLVLLPFEHHVYAA 464
+ L + H
Sbjct: 153 ----AALYEVQHGGHFLED 167
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.4 bits (95), Expect = 1e-04
Identities = 13/138 (9%), Positives = 28/138 (20%), Gaps = 4/138 (2%)
Query: 327 SAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF 386
S A + + DP + + + F
Sbjct: 112 SVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEYDCF 171
Query: 387 GFQTEFRTLWEATNVYIEMSPITHANKI--KKPILIIHGEVDDKVGLFPMQAERFFDALK 444
+ + P + ++H D+ + Q L+
Sbjct: 172 TRLAFPDGIQMYEEEPSRVMPYVKKALSRFSIDMHLVHSYSDELL--TLRQTNCLISCLQ 229
Query: 445 GHGALSRLVLLPFEHHVY 462
+ +L L H
Sbjct: 230 DYQLSFKLYLDDLGLHND 247
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} Length = 280 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 41.0 bits (95), Expect = 2e-04
Identities = 20/147 (13%), Positives = 34/147 (23%), Gaps = 27/147 (18%)
Query: 328 AEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-- 385
+ P+ A G S L A+ P F + SG N + +
Sbjct: 98 TREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSESWWP 157
Query: 386 ----------FGFQTEFRTLWEATNVYIEMSPITHANKIKK---PILIIHGEVDDKV--- 429
G+ + + P+ ++ I + G
Sbjct: 158 TLIGLAMNDSGGYNANSMWGPSSDPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGG 217
Query: 430 ---------GLFPMQAERFFDALKGHG 447
GL + F D G
Sbjct: 218 DNIPAKFLEGLTLRTNQTFRDTYAADG 244
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Score = 41.0 bits (94), Expect = 2e-04
Identities = 24/213 (11%), Positives = 48/213 (22%), Gaps = 10/213 (4%)
Query: 277 GSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVV 336
S + S + A L + + + +
Sbjct: 105 RSATDISAINAVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAEL 164
Query: 337 RRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLW 396
+ + P + LA T +
Sbjct: 165 WQQMV-PDWLGSMPTPNPTVANLSKLAIKLDGTVLLSHSQSGIYPFQTAAMNPKGITAIV 223
Query: 397 EATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLF---PMQAERFFDALKGHGALSRLV 453
+ P P+L++ G+ ++ + F DAL G +L+
Sbjct: 224 -SVEPGECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLM 282
Query: 454 LLPFEH-----HVYAARENVMHVIWETDRWLQK 481
LP H+ N + V W+ +
Sbjct: 283 SLPALGVHGNSHMMMQDRNNLQVADLILDWIGR 315
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} Length = 233 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Score = 40.0 bits (92), Expect = 3e-04
Identities = 34/239 (14%), Positives = 58/239 (24%), Gaps = 43/239 (17%)
Query: 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSG 284
E I Q DG A + P P P + E + +R + +
Sbjct: 4 EGISIQSYDGHTFGALVGSPAK------APAPVIVI-AQEIFGVNA---FMRETVSWLVD 53
Query: 285 MTPTSSLIFLARRFA---VLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVA 341
+ L R A L + KL +E V EAA+ +
Sbjct: 54 QGYAAVCPDLYARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPY- 112
Query: 342 DPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNV 401
++ + G+ G + + A
Sbjct: 113 SNGKVGLVGYCLGGALAFLVAAKGYVDRAV--------------------------GYYG 146
Query: 402 YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHH 460
+ ++K P L G D P + + G L ++ H
Sbjct: 147 VGLEKQLNKVPEVKHPALFHMGGQDHF---VPAPSRQLITEGFGANPLLQVHWYEEAGH 202
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Score = 39.8 bits (91), Expect = 5e-04
Identities = 26/150 (17%), Positives = 44/150 (29%), Gaps = 22/150 (14%)
Query: 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSL 291
+DGV L LY P DGP+P L P + F+ T +++
Sbjct: 13 RDGVRLAVDLYRPDA-----DGPVPVLLVRNP------------YDKFDVFAWSTQSTNW 55
Query: 292 IFLARR-FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGG 350
+ R +AV+ G + AE + ++ + D + + G
Sbjct: 56 LEFVRDGYAVVI---QDTRGLFASEGEFVPHVDDEADAEDTLSWILEQAWCDG-NVGMFG 111
Query: 351 HSYGAFMTAHLLAHAPHLFCCGIARSGSYN 380
SY S +
Sbjct: 112 VSYLGVTQWQAAVSGVGGLKAIAPSMASAD 141
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Score = 38.7 bits (88), Expect = 0.001
Identities = 24/149 (16%), Positives = 32/149 (21%), Gaps = 30/149 (20%)
Query: 341 ADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTL----- 395
DPSRIAVGG S G + A + A +A L
Sbjct: 148 IDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETVSMTNFVDTPL 207
Query: 396 ---------------------WEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPM 434
+ P + E+D
Sbjct: 208 WHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDLTGLPPTYLSTMELD----PLRD 263
Query: 435 QAERFFDALKGHGALSRLVLLPFEHHVYA 463
+ + L G L P H A
Sbjct: 264 EGIEYALRLLQAGVSVELHSFPGTFHGSA 292
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 494 | |||
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 100.0 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 100.0 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 100.0 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.96 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.94 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.94 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.93 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.91 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.9 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.9 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.89 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.89 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.89 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.88 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.88 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.88 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.88 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.88 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.87 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.87 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.87 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.87 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 99.86 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.84 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.84 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.83 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 99.83 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.82 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.82 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 99.81 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.81 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 99.79 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 99.78 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 99.78 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 99.78 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.77 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 99.77 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 99.77 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.75 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.75 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.75 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 99.75 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 99.74 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.74 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 99.74 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 99.74 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 99.73 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 99.72 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.72 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 99.71 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 99.7 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 99.7 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 99.69 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.69 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 99.68 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.67 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 99.67 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 99.65 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.63 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 99.63 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 99.62 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 99.61 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 99.59 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.51 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.5 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.5 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 99.44 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.31 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 99.26 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.22 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.21 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.18 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.15 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 99.13 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.03 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 98.99 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 98.99 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 98.96 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 98.96 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 98.95 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.9 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 98.88 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 98.87 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 98.87 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 98.87 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 98.83 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 98.82 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 98.78 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 98.77 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 98.75 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 98.74 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 98.71 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 98.68 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 98.64 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 98.63 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 98.57 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 98.57 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 98.5 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 98.46 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 98.19 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.07 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 97.98 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 97.78 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 97.78 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 97.76 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 97.74 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 97.73 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 97.71 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 97.67 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 97.66 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 97.6 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 97.44 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 97.41 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 97.4 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 97.37 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 97.32 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 97.32 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 97.13 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 97.05 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 96.87 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 96.84 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 96.52 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 96.26 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 96.19 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 96.18 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 96.18 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 95.93 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 95.85 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 95.78 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 95.66 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 95.62 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 95.47 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 95.39 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 95.38 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 95.22 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 94.59 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 94.39 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 94.31 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 94.3 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 94.12 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 94.11 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 94.1 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 93.99 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 93.67 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 93.59 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 93.35 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 93.28 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 93.19 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 92.91 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 92.34 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 92.2 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 92.13 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 92.06 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 91.81 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 91.66 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 91.33 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 91.28 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 91.2 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 89.94 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 89.92 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 89.74 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 89.43 | |
| d2hu7a1 | 313 | Acylamino-acid-releasing enzyme, N-terminal donain | 88.03 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 87.74 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 87.07 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 86.4 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 86.28 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 85.85 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 83.67 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 83.67 | |
| d2hu7a1 | 313 | Acylamino-acid-releasing enzyme, N-terminal donain | 81.99 |
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=100.00 E-value=2.9e-34 Score=261.83 Aligned_cols=243 Identities=18% Similarity=0.216 Sum_probs=195.7
Q ss_pred cccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 222 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 222 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
..++.|+|++.||.+|+++++.|++. +++.|+||++|||++.... ..| ......|+++||+|+
T Consensus 10 ~~~~~v~~~s~dG~~i~~~l~~p~~~----~~~~Pviv~~HGG~~~~~~---------~~~----~~~~~~la~~G~~v~ 72 (260)
T d2hu7a2 10 AGSRLVWVESFDGSRVPTYVLESGRA----PTPGPTVVLVHGGPFAEDS---------DSW----DTFAASLAAAGFHVV 72 (260)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTS----CSSEEEEEEECSSSSCCCC---------SSC----CHHHHHHHHHTCEEE
T ss_pred CceEEEEEECCCCCEEEEEEEeCCCC----CCCceEEEEECCCCccCCC---------ccc----cHHHHHHHhhccccc
Confidence 46788999999999999999999763 2458999999998753211 112 245668899999999
Q ss_pred eCCCCCCCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC
Q 011049 302 AGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 378 (494)
.+++++..++|.+... ..+....++|+.++++++.+++ +.++++|+|+|+||++++.++..+|+.+++++..+|+
T Consensus 73 ~~d~r~~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~--~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~ 150 (260)
T d2hu7a2 73 MPNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESG--LASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASV 150 (260)
T ss_dssp EECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHHTT--CEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCC
T ss_pred cceeeeccccccccccccccccchhhhhhhccccccccccc--ccceeeccccccccccccchhccCCcccccccccccc
Confidence 9998877666654211 1233456789999999999975 5789999999999999999999999999999999998
Q ss_pred CCCCCC----CCCccc-ccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEE
Q 011049 379 YNKTLT----PFGFQT-EFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLV 453 (494)
Q Consensus 379 ~~~~~~----~~~~~~-~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~ 453 (494)
.+.... ...+.. .....+.+.+.+...+|+.+++++++|+|++||++|.+|| +.++.+++++|++++++++++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~liihG~~D~~vp--~~~~~~~~~~l~~~~~~~~~~ 228 (260)
T d2hu7a2 151 VDWEEMYELSDAAFRNFIEQLTGGSREIMRSRSPINHVDRIKEPLALIHPQNDSRTP--LKPLLRLMGELLARGKTFEAH 228 (260)
T ss_dssp CCHHHHHHTCCHHHHHHHHHHHCSCHHHHHHTCGGGCGGGCCSCEEEEEETTCSSSC--SHHHHHHHHHHHHTTCCEEEE
T ss_pred hhhhhhhcccccccccccccccccccccccccchhhcccccCCCceeeecccCceec--HHHHHHHHHHHHHCCCCeEEE
Confidence 763210 000000 1122345678889999999999999999999999999998 999999999999999999999
Q ss_pred EcCCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 454 LLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 454 ~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
+||+++|++...++..++++.+++||.+||++
T Consensus 229 ~~~g~~H~~~~~e~~~~~~~~~~~fl~~hl~~ 260 (260)
T d2hu7a2 229 IIPDAGHAINTMEDAVKILLPAVFFLATQRER 260 (260)
T ss_dssp EETTCCSSCCBHHHHHHHHHHHHHHHHHHHHC
T ss_pred EECcCCCCCCChHhHHHHHHHHHHHHHHHhcC
Confidence 99999999987788889999999999999863
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=2.9e-34 Score=261.64 Aligned_cols=249 Identities=22% Similarity=0.270 Sum_probs=197.0
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEe
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 302 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 302 (494)
+.|.+.|...||+++.++|++|++++++|+ +|+||++|||++... ... .+. .......++++||+|+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~l~lP~~~~~~kk--~P~iv~~HGGp~~~~------~~~--~~~--~~~~~~~~a~~g~~V~~ 69 (258)
T d2bgra2 2 PSKKLDFIILNETKFWYQMILPPHFDKSKK--YPLLLDVYAGPCSQK------ADT--VFR--LNWATYLASTENIIVAS 69 (258)
T ss_dssp CEEEEEEEEETTEEEEEEEEECTTCCTTSC--EEEEEECCCCTTCCC------CCC--CCC--CSHHHHHHHTTCCEEEE
T ss_pred CceeEEEEEeCCcEEEEEEEECCCcCCCCC--eeEEEEEcCCCCccc------CCC--ccC--cCHHHHHHhcCCcEEEe
Confidence 578999999999999999999999987765 999999999753211 111 111 11233456789999999
Q ss_pred CCCCCCCCCCCCC---CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC
Q 011049 303 GPSIPIIGEGDKL---PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 379 (494)
Q Consensus 303 ~~~~~~~g~g~~~---~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 379 (494)
+++|+..+++..+ ....+......|+.++++++.++..+|+++|+++|+|+||.+++.++..+|++++++++.++..
T Consensus 70 ~d~rg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~~~ 149 (258)
T d2bgra2 70 FDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVS 149 (258)
T ss_dssp ECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCC
T ss_pred ecccccCCcchHHHHhhhhhhhhHHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEEEEeeccc
Confidence 9998766555321 1222334457788899999999999999999999999999999999999999999999988875
Q ss_pred CCCCCCCCcc---cccccccccHHHHHhcCccccccCCC-CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEc
Q 011049 380 NKTLTPFGFQ---TEFRTLWEATNVYIEMSPITHANKIK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLL 455 (494)
Q Consensus 380 ~~~~~~~~~~---~~~~~~~~~~~~~~~~sp~~~~~~~~-~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~ 455 (494)
.......... ......+...+.+...+|+..+++++ +|+|++||++|.+|| +.++.+++++|+++|+++++++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~hG~~D~~Vp--~~~s~~~~~~l~~~g~~~~~~~~ 227 (258)
T d2bgra2 150 RWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVH--FQQSAQISKALVDVGVDFQAMWY 227 (258)
T ss_dssp CGGGSBHHHHHHHHCCCSTTTTHHHHHHSCSGGGGGGGGGSEEEEEEETTCSSSC--THHHHHHHHHHHHHTCCCEEEEE
T ss_pred ccccccccccchhcccccchhhHHHhhcccccccccccccCChheeeecCCCccc--HHHHHHHHHHHHHCCCCEEEEEE
Confidence 5322111000 01123445677788899999998875 799999999999998 99999999999999999999999
Q ss_pred CCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 456 PFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 456 ~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
|+++|++...+....++.++.+||+++|.-
T Consensus 228 ~g~~H~~~~~~~~~~~~~~i~~fl~~~l~~ 257 (258)
T d2bgra2 228 TDEDHGIASSTAHQHIYTHMSHFIKQCFSL 257 (258)
T ss_dssp TTCCTTCCSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCccHHHHHHHHHHHHHHHhcC
Confidence 999999987777888899999999999863
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7e-34 Score=259.00 Aligned_cols=239 Identities=18% Similarity=0.208 Sum_probs=182.6
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
.||.+|++++++|++++++++ +|+||++||||+... ....|. .....+.|+++||+|+++|+|++.++
T Consensus 10 ~dg~~l~~~l~~P~~~~~~~k--~Pviv~~HGGp~~~~--------~~~~~~--~~~~~~~la~~G~~vv~~d~rGs~~~ 77 (258)
T d1xfda2 10 IDDYNLPMQILKPATFTDTTH--YPLLLVVDGTPGSQS--------VAEKFE--VSWETVMVSSHGAVVVKCDGRGSGFQ 77 (258)
T ss_dssp ETTEEECCBEEBCSSCCSSSC--EEEEEECCCCTTCCC--------CCCCCC--CSHHHHHHHTTCCEEECCCCTTCSSS
T ss_pred eCCeEEEEEEEECCCcCCCCc--eeEEEEEcCCccccC--------cCCCcC--cchHHHHHhcCCcEEEEecccccccc
Confidence 599999999999999887765 999999999853221 011122 12345578999999999999987776
Q ss_pred CCCCC---CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC----ceeEEEeCCCCCCCCCC
Q 011049 312 GDKLP---NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH----LFCCGIARSGSYNKTLT 384 (494)
Q Consensus 312 g~~~~---~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~----~~~a~v~~~~~~~~~~~ 384 (494)
|..+. ...+....+.|+.++++++.+++.+|++||+++|+|+||+++++++...++ .+++.+...++......
T Consensus 78 g~~~~~~~~~~~g~~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (258)
T d1xfda2 78 GTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLY 157 (258)
T ss_dssp HHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSS
T ss_pred chhHhhhhhccchhHHHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceeeecc
Confidence 64321 122334568899999999999999999999999999999999998877654 57787777776543221
Q ss_pred CCCc-ccccccccccHHHHHhcCccccccCC-CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCcc
Q 011049 385 PFGF-QTEFRTLWEATNVYIEMSPITHANKI-KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVY 462 (494)
Q Consensus 385 ~~~~-~~~~~~~~~~~~~~~~~sp~~~~~~~-~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 462 (494)
.... ......+..+.+.+...++..++.++ ++|+|++||+.|.+|| +.++.+++++|++.++++++++||+++|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~p~Li~hG~~D~~vp--~~~s~~~~~~l~~~~~~~~~~~~p~~~H~~ 235 (258)
T d1xfda2 158 ASAFSERYLGLHGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIH--FQHTAELITQLIRGKANYSLQIYPDESHYF 235 (258)
T ss_dssp BHHHHHHHHCCCSSCCSSTTTTCTHHHHTSCCSCEEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCCEEEEETTCCSSC
T ss_pred ccccccccccccccchHHhhccchhhhhhhhhcccccccccCCCCCcC--HHHHHHHHHHHHHCCCCEEEEEECCCCCCC
Confidence 1000 00112222334556667777777775 6899999999999998 999999999999999999999999999999
Q ss_pred CCcccHHHHHHHHHHHHHHhcC
Q 011049 463 AARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 463 ~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
........+++.+++||+++|+
T Consensus 236 ~~~~~~~~~~~~~~~f~~~~~~ 257 (258)
T d1xfda2 236 TSSSLKQHLYRSIINFFVECFR 257 (258)
T ss_dssp CCHHHHHHHHHHHHHHHTTTTC
T ss_pred CCCcCHHHHHHHHHHHHHHhhC
Confidence 8767777888999999999885
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.96 E-value=5.1e-28 Score=222.56 Aligned_cols=251 Identities=16% Similarity=0.173 Sum_probs=179.1
Q ss_pred ccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEE
Q 011049 221 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 300 (494)
Q Consensus 221 ~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 300 (494)
.+++|+|+|++.||.+|+++|++|++++++++ +|+||++|||++....+. + .......++..++.+
T Consensus 4 ~y~~e~v~~~s~DG~~i~~~l~~P~~~~~~~~--~P~iv~~HGG~~~~~~~~---------~---~~~~~~~~~~~~~~~ 69 (280)
T d1qfma2 4 DYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGS--HPAFLYGYGGFNISITPN---------Y---SVSRLIFVRHMGGVL 69 (280)
T ss_dssp GEEEEEEEEECTTSCEEEEEEEEETTCCCSSC--SCEEEECCCCTTCCCCCC---------C---CHHHHHHHHHHCCEE
T ss_pred cCEEEEEEEECCCCCEEEEEEEEcCCCCCCCC--eEEEEEECCCCcccCCCC---------c---chhhhhhhcccceee
Confidence 34678999999999999999999999876554 999999999875432211 1 112334556678888
Q ss_pred EeCCCCCCCCCCCC---CCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCC
Q 011049 301 LAGPSIPIIGEGDK---LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 377 (494)
Q Consensus 301 ~~~~~~~~~g~g~~---~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 377 (494)
+...+++...++.. ............+...+..+...+...+..+++++|+|.||+++..++...++.+++++...+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~ 149 (280)
T d1qfma2 70 AVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVG 149 (280)
T ss_dssp EEECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESC
T ss_pred eccccccccccchhhhhcccccccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccchhhheeeecc
Confidence 77565444332211 111223344456666777777888888889999999999999999999999999999999999
Q ss_pred CCCCCCCCCC-cc------cccccccccHHHHHhcCcccc------ccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 011049 378 SYNKTLTPFG-FQ------TEFRTLWEATNVYIEMSPITH------ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALK 444 (494)
Q Consensus 378 ~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~sp~~~------~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~ 444 (494)
+.+....... .. ......+.....+...+|..+ +.....|+||+||++|.+|| +.++++++++|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~pP~LiihG~~D~~Vp--~~~s~~l~~aL~ 227 (280)
T d1qfma2 150 VMDMLKFHKYTIGHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVV--PLHSLKFIATLQ 227 (280)
T ss_dssp CCCTTTGGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSC--THHHHHHHHHHH
T ss_pred ccchhhhccccccccceecccCCCcccccccccccccccccchhhhcccCCCceEEeecccCCCCC--HHHHHHHHHHHH
Confidence 8774321100 00 001122233344444444444 33344689999999999998 999999999996
Q ss_pred h-------CCCcEEEEEcCCCCCccCCccc-HHHHHHHHHHHHHHhcCCCC
Q 011049 445 G-------HGALSRLVLLPFEHHVYAAREN-VMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 445 ~-------~g~~~~~~~~~~~~H~~~~~~~-~~~~~~~~~~fl~~~l~~~~ 487 (494)
+ .++++++++||+++|++....+ ..+.+.++++||++||+...
T Consensus 228 ~~g~~~~~~~~~~~l~~~~~~gHgf~~~~~~~~~~~~~~~~fl~k~L~~~~ 278 (280)
T d1qfma2 228 YIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNIDW 278 (280)
T ss_dssp HHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HhhhhhhcCCCcEEEEEeCcCCCCCCCcHHHHHHHHHHHHHHHHHhcCCCC
Confidence 4 4789999999999999875543 34667789999999999753
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.94 E-value=2.1e-26 Score=216.31 Aligned_cols=235 Identities=15% Similarity=0.127 Sum_probs=168.4
Q ss_pred cccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeE
Q 011049 220 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 299 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~ 299 (494)
..++.+.|+|++.||.+|++++++|++. ++++|+||++||++... . + ......|+++||+
T Consensus 51 ~~~~~~~v~~~s~dG~~l~~~l~~P~~~----~~~~P~Vv~~hG~~~~~-----------~-~----~~~~~~~a~~G~~ 110 (322)
T d1vlqa_ 51 KTVEAYDVTFSGYRGQRIKGWLLVPKLE----EEKLPCVVQYIGYNGGR-----------G-F----PHDWLFWPSMGYI 110 (322)
T ss_dssp SSEEEEEEEEECGGGCEEEEEEEEECCS----CSSEEEEEECCCTTCCC-----------C-C----GGGGCHHHHTTCE
T ss_pred CCeEEEEEEEECCCCcEEEEEEEeccCC----CCCccEEEEecCCCCCc-----------C-c----HHHHHHHHhCCCE
Confidence 3456789999999999999999999863 23489999999975321 0 1 1233468999999
Q ss_pred EEeCCCCCCCCCCCCC------------------------CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHH
Q 011049 300 VLAGPSIPIIGEGDKL------------------------PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGA 355 (494)
Q Consensus 300 v~~~~~~~~~g~g~~~------------------------~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG 355 (494)
|+.+|.++....+... .........+.|+.++++++..+..+|++|++++|+|+||
T Consensus 111 v~~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG 190 (322)
T d1vlqa_ 111 CFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGG 190 (322)
T ss_dssp EEEECCTTCCCSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHH
T ss_pred EEEeeccccCCCCCCccccccccccccccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccch
Confidence 9998887653322210 1112334557899999999999999999999999999999
Q ss_pred HHHHHHHHhCCCceeEEEeCCCCCCCCCC-----CCCccccc--------ccccccHHHHHhcCccccccCCCCCEEEEe
Q 011049 356 FMTAHLLAHAPHLFCCGIARSGSYNKTLT-----PFGFQTEF--------RTLWEATNVYIEMSPITHANKIKKPILIIH 422 (494)
Q Consensus 356 ~~a~~~~~~~p~~~~a~v~~~~~~~~~~~-----~~~~~~~~--------~~~~~~~~~~~~~sp~~~~~~~~~P~li~~ 422 (494)
++++.++... .+++++++.++....... ........ .......+.+...||..++.++++|+|++|
T Consensus 191 ~~a~~~~~~~-~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~~i~~P~Lv~~ 269 (322)
T d1vlqa_ 191 GIALAVSALS-KKAKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSV 269 (322)
T ss_dssp HHHHHHHHHC-SSCCEEEEESCCSCCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTTCCSCEEEEE
T ss_pred HHHHHHHhcC-CCccEEEEeCCccccHHHHHhhccccchhhHHhhhhcCcchhhhHHHHhhhhhHHHHHhcCCCCEEEEE
Confidence 9999999988 568888887776442110 00000000 000112234456799999999999999999
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 423 GEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 423 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
|++|.+|| +.++.++++++ +.+.++++||+++|.... ....++.++||+++|+
T Consensus 270 G~~D~~vp--~~~~~~~~~~~---~~~~~l~~~p~~~H~~~~----~~~~~~~~~~l~~~l~ 322 (322)
T d1vlqa_ 270 GLMDNICP--PSTVFAAYNYY---AGPKEIRIYPYNNHEGGG----SFQAVEQVKFLKKLFE 322 (322)
T ss_dssp ETTCSSSC--HHHHHHHHHHC---CSSEEEEEETTCCTTTTH----HHHHHHHHHHHHHHHC
T ss_pred eCCCCCcC--HHHHHHHHHHC---CCCeEEEEECCCCCCCcc----ccCHHHHHHHHHHHhC
Confidence 99999998 88876666554 667899999999997542 2334456899999874
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.94 E-value=1e-25 Score=210.93 Aligned_cols=235 Identities=14% Similarity=0.119 Sum_probs=169.8
Q ss_pred cccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeE
Q 011049 220 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 299 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~ 299 (494)
...+.+.|+|++.||.+|++++++|++ +++.|+||++||++... ..+ ...+..|+++||+
T Consensus 52 ~~~~~~~v~~~~~dg~~i~~~l~~P~~-----~~~~P~vv~~HG~~~~~-----------~~~----~~~~~~la~~Gy~ 111 (318)
T d1l7aa_ 52 DGVKVYRLTYKSFGNARITGWYAVPDK-----EGPHPAIVKYHGYNASY-----------DGE----IHEMVNWALHGYA 111 (318)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEESS-----CSCEEEEEEECCTTCCS-----------GGG----HHHHHHHHHTTCE
T ss_pred CCeEEEEEEEECCCCcEEEEEEEecCC-----CCCceEEEEecCCCCCc-----------cch----HHHHHHHHHCCCE
Confidence 345688999999999999999999986 35689999999975211 112 2356688999999
Q ss_pred EEeCCCCCCCCCCCCC-----------------CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHH
Q 011049 300 VLAGPSIPIIGEGDKL-----------------PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLL 362 (494)
Q Consensus 300 v~~~~~~~~~g~g~~~-----------------~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~ 362 (494)
|+++|.+|........ .........+.|...+++++..++.+|+++|+++|+|+||.+++.++
T Consensus 112 vi~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~ 191 (318)
T d1l7aa_ 112 TFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAA 191 (318)
T ss_dssp EEEECCTTTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHH
T ss_pred EEEEeeCCCCCCCCCcccchhhhhcchhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHh
Confidence 9998877543322111 01112345578889999999999999999999999999999999999
Q ss_pred HhCCCceeEEEeCCCCCCCC--------CCCCCcc----cccccccccH---HHHHhcCccccccCCCCCEEEEecCCCC
Q 011049 363 AHAPHLFCCGIARSGSYNKT--------LTPFGFQ----TEFRTLWEAT---NVYIEMSPITHANKIKKPILIIHGEVDD 427 (494)
Q Consensus 363 ~~~p~~~~a~v~~~~~~~~~--------~~~~~~~----~~~~~~~~~~---~~~~~~sp~~~~~~~~~P~li~~G~~D~ 427 (494)
...+ .++++++..|..... ...+... ......+... ......++...++++++|+|++||++|.
T Consensus 192 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~ 270 (318)
T d1l7aa_ 192 ALSD-IPKAAVADYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDK 270 (318)
T ss_dssp HHCS-CCSEEEEESCCSCCHHHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEETTCS
T ss_pred hcCc-ccceEEEeccccccHHHHhhcccccccchhhhhhhccccccccccccccccccccccccccCCCCEEEEEECCCC
Confidence 9985 456666666543210 0000000 0001111111 2234456777889999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 428 KVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 428 ~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
+|| +.++.++++++ +.+.++++||+++|.+. .+..+++++||++||+|
T Consensus 271 ~vp--~~~~~~~~~~l---~~~~~l~~~~~~gH~~~-----~~~~~~~~~fl~~~LkG 318 (318)
T d1l7aa_ 271 VTP--PSTVFAAYNHL---ETKKELKVYRYFGHEYI-----PAFQTEKLAFFKQILKG 318 (318)
T ss_dssp SSC--HHHHHHHHHHC---CSSEEEEEETTCCSSCC-----HHHHHHHHHHHHHHHCC
T ss_pred CcC--HHHHHHHHHHc---CCCcEEEEECCCCCCCc-----HHHHHHHHHHHHHhCCC
Confidence 998 99988888776 45789999999999754 36678899999999986
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.93 E-value=1.1e-25 Score=213.58 Aligned_cols=236 Identities=17% Similarity=0.190 Sum_probs=166.1
Q ss_pred cccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeE
Q 011049 220 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 299 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~ 299 (494)
.....|.++++ .||.+|+++++.|++ .++.|+||++||.. +... ........|+++||+
T Consensus 102 ~~~~~e~v~ip-~dg~~l~g~l~~P~~-----~~~~P~Vi~~hG~~-----------~~~e----~~~~~~~~l~~~G~~ 160 (360)
T d2jbwa1 102 LSPPAERHELV-VDGIPMPVYVRIPEG-----PGPHPAVIMLGGLE-----------STKE----ESFQMENLVLDRGMA 160 (360)
T ss_dssp SSSCEEEEEEE-ETTEEEEEEEECCSS-----SCCEEEEEEECCSS-----------CCTT----TTHHHHHHHHHTTCE
T ss_pred CCCCeEEeecC-cCCcccceEEEecCC-----CCCceEEEEeCCCC-----------ccHH----HHHHHHHHHHhcCCE
Confidence 34567889998 589999999999976 34589999999852 1111 122355678999999
Q ss_pred EEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC
Q 011049 300 VLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 379 (494)
Q Consensus 300 v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 379 (494)
|+.+|.+| +|.+........+...++.++++++..+..+|++||+|+|+|+||++++.++...| +++++|+.+|+.
T Consensus 161 vl~~D~~G---~G~s~~~~~~~~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~p-ri~a~V~~~~~~ 236 (360)
T d2jbwa1 161 TATFDGPG---QGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGFS 236 (360)
T ss_dssp EEEECCTT---SGGGTTTCCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCS
T ss_pred EEEEcccc---ccccCccccccccHHHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCC-CcceEEEEcccc
Confidence 99977654 44432211111122334567789999999899999999999999999999999986 689999999987
Q ss_pred CCCCCCCCccccc-------ccc-cc--cHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCc
Q 011049 380 NKTLTPFGFQTEF-------RTL-WE--ATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGAL 449 (494)
Q Consensus 380 ~~~~~~~~~~~~~-------~~~-~~--~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~ 449 (494)
+............ ... .+ ........+....+.++++|+|++||++|. || +.++..+++.+.. .+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-vp--~~~~~~l~~~~~~--~~ 311 (360)
T d2jbwa1 237 DLDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VP--LSFVDTVLELVPA--EH 311 (360)
T ss_dssp CSTTGGGSCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SC--THHHHHHHHHSCG--GG
T ss_pred cHHHHhhhhhhhhHHHHHhccCCchHHHHHHHHhhcchhhhHhhCCCCEEEEEeCCCC-cC--HHHHHHHHHhcCC--CC
Confidence 6432111000000 000 00 112233455666788999999999999997 67 8999999988754 34
Q ss_pred EEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCCCC
Q 011049 450 SRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 450 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~ 487 (494)
.+++++++++|... .........+.+||.++|....
T Consensus 312 ~~l~~~~~g~H~~~--~~~~~~~~~i~dWl~~~L~~g~ 347 (360)
T d2jbwa1 312 LNLVVEKDGDHCCH--NLGIRPRLEMADWLYDVLVAGK 347 (360)
T ss_dssp EEEEEETTCCGGGG--GGTTHHHHHHHHHHHHHHTSSC
T ss_pred eEEEEECCCCcCCC--cChHHHHHHHHHHHHHHhccCC
Confidence 78889999999754 3344667789999999996543
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.91 E-value=7.6e-24 Score=188.45 Aligned_cols=207 Identities=16% Similarity=0.132 Sum_probs=149.2
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeC
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 303 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 303 (494)
.|.|+|++.||..+.++++.|.+ +++|+||++|+++. ........+..|+++||.|+++
T Consensus 3 ~e~v~~~~~dg~~~~a~~~~P~~------~~~P~vl~~h~~~G---------------~~~~~~~~a~~lA~~Gy~vl~p 61 (233)
T d1dina_ 3 TEGISIQSYDGHTFGALVGSPAK------APAPVIVIAQEIFG---------------VNAFMRETVSWLVDQGYAAVCP 61 (233)
T ss_dssp CTTCCEECTTSCEECEEEECCSS------SSEEEEEEECCTTB---------------SCHHHHHHHHHHHHTTCEEEEE
T ss_pred ceEEEEEcCCCCEEEEEEECCCC------CCceEEEEeCCCCC---------------CCHHHHHHHHHHHhcCCcceee
Confidence 56788999999999999999964 35999999996421 1111123466889999999998
Q ss_pred CCCCCCCCCCCCCCch--------------hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCce
Q 011049 304 PSIPIIGEGDKLPNDR--------------FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLF 369 (494)
Q Consensus 304 ~~~~~~g~g~~~~~~~--------------~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~ 369 (494)
|.++..+.+....... .......|+.++++++.+.+. +.+||+++|+|+||.+++.++... .+
T Consensus 62 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~aa~~~l~~~~~-~~~~i~~~G~s~Gg~~a~~~a~~~--~~ 138 (233)
T d1dina_ 62 DLYARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPY-SNGKVGLVGYCLGGALAFLVAAKG--YV 138 (233)
T ss_dssp CGGGGTSTTCBCCTTSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTT-EEEEEEEEEETHHHHHHHHHHHHT--CS
T ss_pred eeccCCCcCcccChHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHhCCC-CCCceEEEEecccccceeeccccc--cc
Confidence 8655444332211110 123346788999999988774 558999999999999999988774 35
Q ss_pred eEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCc
Q 011049 370 CCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGAL 449 (494)
Q Consensus 370 ~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~ 449 (494)
.++++..|... .+++..+.++++|+|++||++|+.+| .++.+.+.+.++ .+++
T Consensus 139 ~~~~~~~~~~~------------------------~~~~~~~~~i~~Pvl~~~G~~D~~vp--~e~~~~~~~~~~-~~~~ 191 (233)
T d1dina_ 139 DRAVGYYGVGL------------------------EKQLNKVPEVKHPALFHMGGQDHFVP--APSRQLITEGFG-ANPL 191 (233)
T ss_dssp SEEEEESCSCG------------------------GGGGGGGGGCCSCEEEEEETTCTTSC--HHHHHHHHHHHT-TCTT
T ss_pred ceecccccccc------------------------ccchhhhhccCCcceeeecccccCCC--HHHHHHHHHHHh-cCCC
Confidence 66666554210 12334556788999999999999998 888877777664 5788
Q ss_pred EEEEEcCCCCCccCCcc-------cHHHHHHHHHHHHHH
Q 011049 450 SRLVLLPFEHHVYAARE-------NVMHVIWETDRWLQK 481 (494)
Q Consensus 450 ~~~~~~~~~~H~~~~~~-------~~~~~~~~~~~fl~~ 481 (494)
+++++|||++|+|.... ..+..++++++||..
T Consensus 192 ~~~~~y~ga~HgF~~~~~~~y~~~aa~~a~~r~~~ffa~ 230 (233)
T d1dina_ 192 LQVHWYEEAGHSFARTSSSGYVASAAALANERTLDFLAP 230 (233)
T ss_dssp EEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGG
T ss_pred EEEEEECCCCcCCCCCCCccCCHHHHHHHHHHHHHHHHc
Confidence 99999999999985311 123557788899854
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.90 E-value=2.7e-23 Score=187.85 Aligned_cols=193 Identities=15% Similarity=0.140 Sum_probs=145.4
Q ss_pred EEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCC
Q 011049 237 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP 316 (494)
Q Consensus 237 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~ 316 (494)
..+.||+|.+.. ++++|+||++||.+. ....+ ...+..|+++||+|+.++.++. +..
T Consensus 37 ~~~~ly~P~~~~---~g~~P~Vv~~HG~~g-----------~~~~~----~~~a~~lA~~Gy~V~~~d~~~~---~~~-- 93 (260)
T d1jfra_ 37 GGGTIYYPTSTA---DGTFGAVVISPGFTA-----------YQSSI----AWLGPRLASQGFVVFTIDTNTT---LDQ-- 93 (260)
T ss_dssp CCEEEEEESCCT---TCCEEEEEEECCTTC-----------CGGGT----TTHHHHHHTTTCEEEEECCSST---TCC--
T ss_pred cCEEEEEcCCCC---CCCccEEEEECCCCC-----------CHHHH----HHHHHHHHhCCCEEEEEeeCCC---cCC--
Confidence 457899998632 345999999999641 11122 2456789999999999766432 211
Q ss_pred CchhHHHHHHHHHHHHHHHHHc----CCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCccccc
Q 011049 317 NDRFVEQLVSSAEAAVEEVVRR----GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEF 392 (494)
Q Consensus 317 ~~~~~~~~~~d~~~~v~~l~~~----~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~ 392 (494)
......|+.++++++.+. +.+|++||+++|||+||.+++.++... .+++++|+++|....
T Consensus 94 ----~~~~~~d~~~~~~~l~~~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~~-~~~~A~v~~~~~~~~----------- 157 (260)
T d1jfra_ 94 ----PDSRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSR-TSLKAAIPLTGWNTD----------- 157 (260)
T ss_dssp ----HHHHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHC-TTCSEEEEESCCCSC-----------
T ss_pred ----chhhHHHHHHHHHHHHhhhhhhccccccceEEEeccccchHHHHHHhhh-ccchhheeeeccccc-----------
Confidence 233467788888998884 568999999999999999999999998 578999998885321
Q ss_pred ccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHH
Q 011049 393 RTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVI 472 (494)
Q Consensus 393 ~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~ 472 (494)
....++++|+|++||++|..+| +.+..+.+..+...+.+.+++++++++|++....+ ....
T Consensus 158 ----------------~~~~~~~~P~l~i~G~~D~~vp--~~~~~~~~~~~~~~~~~~~~~~i~ga~H~~~~~~~-~~~~ 218 (260)
T d1jfra_ 158 ----------------KTWPELRTPTLVVGADGDTVAP--VATHSKPFYESLPGSLDKAYLELRGASHFTPNTSD-TTIA 218 (260)
T ss_dssp ----------------CCCTTCCSCEEEEEETTCSSSC--TTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCC-HHHH
T ss_pred ----------------ccccccccceeEEecCCCCCCC--HHHHHHHHHHhcccCCCEEEEEECCCccCCCCCCh-HHHH
Confidence 1234578999999999999998 77655555555556788999999999998765443 4567
Q ss_pred HHHHHHHHHhcCCCC
Q 011049 473 WETDRWLQKYCLSNT 487 (494)
Q Consensus 473 ~~~~~fl~~~l~~~~ 487 (494)
+.+++||+.||++.+
T Consensus 219 ~~~~~wl~~~L~~d~ 233 (260)
T d1jfra_ 219 KYSISWLKRFIDSDT 233 (260)
T ss_dssp HHHHHHHHHHHSCCG
T ss_pred HHHHHHHHHHhcCch
Confidence 788999999998764
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.90 E-value=5.5e-23 Score=192.15 Aligned_cols=237 Identities=19% Similarity=0.139 Sum_probs=153.4
Q ss_pred cccccEEEEEEcCCCc-eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHH-hCC
Q 011049 220 ASLQKEMIKYQRKDGV-PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARR 297 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~-~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G 297 (494)
..+..+.+++++.||. .+.+++|+|++. .++.|+||++|||+|..++.. .+ ......++ +.|
T Consensus 46 ~~v~~~~~~~~~~~g~~~i~~~~~~P~~~----~~~~Pvvv~iHGGG~~~g~~~--------~~----~~~~~~la~~~G 109 (317)
T d1lzla_ 46 DGVSLRELSAPGLDGDPEVKIRFVTPDNT----AGPVPVLLWIHGGGFAIGTAE--------SS----DPFCVEVARELG 109 (317)
T ss_dssp TTEEEEEEEECCSTTCCCEEEEEEEESSC----CSCEEEEEEECCSTTTSCCGG--------GG----HHHHHHHHHHHC
T ss_pred CCceEEEEEEecCCCCceEEEEEECCCCC----CCCCcEEEEecCccccccccc--------cc----chHHHhHHhhcC
Confidence 3456788999999985 699999999862 346899999999987543321 11 12334555 469
Q ss_pred eEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHhCCC----cee
Q 011049 298 FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHAPH----LFC 370 (494)
Q Consensus 298 ~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~~p~----~~~ 370 (494)
|+|+.++|+...... ....++|+.++++|+.++ ..+|++||+|+|+|+||++++.++.+.++ ...
T Consensus 110 ~~V~~vdYrl~pe~~--------~~~~~~d~~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~~~~~~~~~~ 181 (317)
T d1lzla_ 110 FAVANVEYRLAPETT--------FPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVA 181 (317)
T ss_dssp CEEEEECCCCTTTSC--------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCC
T ss_pred Ccccccccccccccc--------ccccccccccchhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhhhhccccccc
Confidence 999998887543221 134467777888877654 34899999999999999999988876422 122
Q ss_pred EEEeCCCCCCCCCCCCCcccc-ccccc--------------------ccHHHHHhcCccccccC-CCCCEEEEecCCCCC
Q 011049 371 CGIARSGSYNKTLTPFGFQTE-FRTLW--------------------EATNVYIEMSPITHANK-IKKPILIIHGEVDDK 428 (494)
Q Consensus 371 a~v~~~~~~~~~~~~~~~~~~-~~~~~--------------------~~~~~~~~~sp~~~~~~-~~~P~li~~G~~D~~ 428 (494)
..+...+..+.......+... ....+ ..+......+|...... ..+|+|+++|+.|..
T Consensus 182 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~li~~g~~D~l 261 (317)
T d1lzla_ 182 FQFLEIPELDDRLETVSMTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDLTGLPPTYLSTMELDPL 261 (317)
T ss_dssp EEEEESCCCCTTCCSHHHHHCSSCSSCCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGCSCCTTCCCEEEEEETTCTT
T ss_pred ccccccccccccccccccccccccchhhhhhhHHHHhhhccccccCCCCchhccccCchhhhhccCCCCeEEEECCCCCC
Confidence 333333322211110000000 00000 00010111122222222 237999999999954
Q ss_pred CCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCc---ccHHHHHHHHHHHHHHhcC
Q 011049 429 VGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR---ENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 429 v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~---~~~~~~~~~~~~fl~~~l~ 484 (494)
..+++.|+++|++.|+++++++|++++|+|... ....+...++++||.++|+
T Consensus 262 ----~~~~~~~~~~L~~~G~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~l~r~Lr 316 (317)
T d1lzla_ 262 ----RDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLR 316 (317)
T ss_dssp ----HHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTC
T ss_pred ----HHHHHHHHHHHHHCCCCEEEEEECcCccCCcccCCchHHHHHHHHHHHHHHHHhC
Confidence 789999999999999999999999999987532 2234567789999999986
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.89 E-value=8.5e-23 Score=193.44 Aligned_cols=239 Identities=20% Similarity=0.216 Sum_probs=167.4
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeC
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 303 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 303 (494)
.+.|.++.+||++|.+.||+|++ .+++|+||+.||-+-.. ...... .....+.|+++||+|+..
T Consensus 5 ~~~v~ipmrDGv~L~~~vy~P~~-----~~~~P~il~~~pyg~~~----------~~~~~~-~~~~~~~~a~~GY~vv~~ 68 (347)
T d1ju3a2 5 ASNVMVPMRDGVRLAVDLYRPDA-----DGPVPVLLVRNPYDKFD----------VFAWST-QSTNWLEFVRDGYAVVIQ 68 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEEECC-----SSCEEEEEEEESSCTTC----------CHHHHT-TSCCTHHHHHTTCEEEEE
T ss_pred EeCeEEECCCCCEEEEEEEEcCC-----CCCEEEEEEEcCCCCcc----------ccCcCc-ccHHHHHHHHCCCEEEEE
Confidence 46689999999999999999975 34599999999732100 000111 112345889999999998
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC
Q 011049 304 PSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL 383 (494)
Q Consensus 304 ~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~ 383 (494)
|.||..+++.... .......|..++++|+.++.+.| .||+++|+||||++++.+|+..|..++|+++.++..|...
T Consensus 69 d~RG~g~S~G~~~---~~~~~~~d~~d~i~w~~~q~~~~-grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d~~~ 144 (347)
T d1ju3a2 69 DTRGLFASEGEFV---PHVDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYR 144 (347)
T ss_dssp ECTTSTTCCSCCC---TTTTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCC
T ss_pred eeCCccccCCccc---cccchhhhHHHHHHHHHhhccCC-cceEeeeccccccchhhhhhcccccceeeeeccccchhhh
Confidence 8776554443322 22233467788999999999887 6999999999999999999999999999999999887532
Q ss_pred CCCCcc-----ccc------------------------------------------c------------ccc--------
Q 011049 384 TPFGFQ-----TEF------------------------------------------R------------TLW-------- 396 (494)
Q Consensus 384 ~~~~~~-----~~~------------------------------------------~------------~~~-------- 396 (494)
...... ... . .+|
T Consensus 145 ~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (347)
T d1ju3a2 145 APWYGPGGALSVEALLGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVDH 224 (347)
T ss_dssp CCCSCTTCCCCHHHHHHHHHHHHHHHHTTSSSCCTTHHHHHHHHHHHHHCHHHHHTCSSTTCCTTHHHHCTHHHHTTTTC
T ss_pred hhhhhcCCccchhhHHHHHHHhhccccccccccCcchhhHHhhhhhhcccchhhhccCccccccccccchhhHHHHhhhc
Confidence 111000 000 0 000
Q ss_pred -ccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccC------------
Q 011049 397 -EATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA------------ 463 (494)
Q Consensus 397 -~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~------------ 463 (494)
...+.|...++...+.++++|+|+++|..|.. ...+.+++++++. +.+.++++-|. .|...
T Consensus 225 ~~~~~~w~~~~~~~~~~~i~vP~L~i~G~~D~~----~~~~~~~~~~~~~-~~~~~liigpw-~H~~~~~~~~~~~~g~~ 298 (347)
T d1ju3a2 225 PDNDESWQSISLFERLGGLATPALITAGWYDGF----VGESLRTFVAVKD-NADARLVVGPW-SHSNLTGRNADRKFGIA 298 (347)
T ss_dssp CSCCHHHHTTCCHHHHTTCCCCEEEEEEEECTT----HHHHHHHHHHHTT-TSCEEEEEEEE-ESSCCSSEETTEECCGG
T ss_pred ccchhhhhcCCHHHHhhcCCCCEEEeccccCCC----cchhHHHHHHhhc-cCCceEEEcCc-cccCcccccCCCCCCcc
Confidence 01134556678888999999999999999986 4456788888875 45678888776 45421
Q ss_pred CcccHHHHHHHHHHHHHHhcCCCCC
Q 011049 464 ARENVMHVIWETDRWLQKYCLSNTS 488 (494)
Q Consensus 464 ~~~~~~~~~~~~~~fl~~~l~~~~~ 488 (494)
......+....+++||++||++..+
T Consensus 299 ~~~~~~~~~~~~l~wfD~~LKg~~~ 323 (347)
T d1ju3a2 299 ATYPIQEATTMHKAFFDRHLRGETD 323 (347)
T ss_dssp GSCCHHHHHHHHHHHHHHHTSCCTT
T ss_pred ccccHHHHHHHHHHHHHHHhCCCCC
Confidence 1122446677889999999997654
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.89 E-value=4.5e-22 Score=172.66 Aligned_cols=211 Identities=15% Similarity=0.147 Sum_probs=151.1
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEe
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 302 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 302 (494)
+.+.+++...+| ++.+.+..|+... ..+.+++|++|+.+... ++.+. ......+..|+++||.|+.
T Consensus 7 ~~~~l~i~gp~G-~l~~~~~~p~~~~---~~~~~~~vl~Hph~~~G--------G~~~~--~~~~~la~~l~~~G~~vlr 72 (218)
T d2fuka1 7 ESAALTLDGPVG-PLDVAVDLPEPDV---AVQPVTAIVCHPLSTEG--------GSMHN--KVVTMAARALRELGITVVR 72 (218)
T ss_dssp SCEEEEEEETTE-EEEEEEECCCTTS---CCCSEEEEEECSCTTTT--------CSTTC--HHHHHHHHHHHTTTCEEEE
T ss_pred CceEEEEeCCCc-cEEEEEEcCCCCC---CCCCcEEEEECCCCCCC--------cCCCC--hHHHHHHHHHHHcCCeEEE
Confidence 457789999998 7999999996532 23367888898654211 11111 1112345678999999999
Q ss_pred CCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCC
Q 011049 303 GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT 382 (494)
Q Consensus 303 ~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~ 382 (494)
+|+++ +|.+...........+|+.++++|+.++. +.++++++|+||||.+++.++.+. ..+++|+++|..+..
T Consensus 73 fd~RG---~G~S~g~~~~~~~~~~D~~a~~~~~~~~~--~~~~v~l~G~S~Gg~va~~~a~~~--~~~~lil~ap~~~~~ 145 (218)
T d2fuka1 73 FNFRS---VGTSAGSFDHGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRW 145 (218)
T ss_dssp ECCTT---STTCCSCCCTTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTB
T ss_pred eecCC---CccCCCccCcCcchHHHHHHHHHHHhhcc--cCceEEEEEEcccchhhhhhhccc--ccceEEEeCCcccch
Confidence 77764 45554332333456889999999999875 457899999999999999888875 367888888864321
Q ss_pred CCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCcc
Q 011049 383 LTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVY 462 (494)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 462 (494)
. + ...++.+|+|++||++|..|| ++++.++++++ ..+.+++++||++|.|
T Consensus 146 ~----~---------------------~~~~~~~P~Lvi~G~~D~~vp--~~~~~~l~~~~---~~~~~l~~i~ga~H~f 195 (218)
T d2fuka1 146 D----F---------------------SDVQPPAQWLVIQGDADEIVD--PQAVYDWLETL---EQQPTLVRMPDTSHFF 195 (218)
T ss_dssp C----C---------------------TTCCCCSSEEEEEETTCSSSC--HHHHHHHHTTC---SSCCEEEEETTCCTTC
T ss_pred h----h---------------------hccccccceeeEecCCCcCcC--HHHHHHHHHHc---cCCceEEEeCCCCCCC
Confidence 0 0 012346899999999999998 88887776544 3456899999999988
Q ss_pred CCcccHHHHHHHHHHHHHHhcCCC
Q 011049 463 AARENVMHVIWETDRWLQKYCLSN 486 (494)
Q Consensus 463 ~~~~~~~~~~~~~~~fl~~~l~~~ 486 (494)
.. ........+.+|+.+||...
T Consensus 196 ~~--~~~~l~~~~~~~v~~~l~~~ 217 (218)
T d2fuka1 196 HR--KLIDLRGALQHGVRRWLPAT 217 (218)
T ss_dssp TT--CHHHHHHHHHHHHGGGCSSC
T ss_pred CC--CHHHHHHHHHHHHHHhcCCC
Confidence 64 33467778999999998754
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.89 E-value=2.1e-22 Score=190.80 Aligned_cols=242 Identities=14% Similarity=0.025 Sum_probs=162.9
Q ss_pred cccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeE
Q 011049 220 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 299 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~ 299 (494)
..+..+..++++.||..|++.+|.|++. +++.|+||++|||||..++.. .. .....+..++++|++
T Consensus 75 ~~v~~~~~~i~~~dg~~i~~~iy~P~~~----~~~~Pviv~~HGGG~~~gs~~--------~~--~~~~~~~~la~~g~~ 140 (358)
T d1jkma_ 75 DDVETSTETILGVDGNEITLHVFRPAGV----EGVLPGLVYTHGGGMTILTTD--------NR--VHRRWCTDLAAAGSV 140 (358)
T ss_dssp CCEEEEEEEEECTTSCEEEEEEEEETTC----CSCEEEEEEECCSTTTSSCSS--------SH--HHHHHHHHHHHTTCE
T ss_pred CCccEEEEEEeCCCCCEEEEEEEecCCC----CCCCCeEEEecCCeeeecccc--------cc--ccchHHHHHHhhhhe
Confidence 3456788899999999999999999863 345899999999987543321 10 011345678899999
Q ss_pred EEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC-CCCCCcEEEEecChHHHHHHHHHHh-----CCCceeEEE
Q 011049 300 VLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG-VADPSRIAVGGHSYGAFMTAHLLAH-----APHLFCCGI 373 (494)
Q Consensus 300 v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~-~~d~~ri~i~G~S~GG~~a~~~~~~-----~p~~~~a~v 373 (494)
|+.++||...+...+ ..+ ...++|+.++++|+.++. ..|++||+|+|+|+||++++.++.. ....+.+.+
T Consensus 141 VvsvdYRla~~~~pe---~~~-p~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~ 216 (358)
T d1jkma_ 141 VVMVDFRNAWTAEGH---HPF-PSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVY 216 (358)
T ss_dssp EEEEECCCSEETTEE---CCT-THHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEE
T ss_pred eeeeeeccccccccc---CCC-chhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccc
Confidence 999998764322111 112 346889999999998752 3578999999999999999877654 124678888
Q ss_pred eCCCCCCCCCCCCCcccc--------cccccccH-------HHH-----HhcCcccccc-------CCCCCEEEEecCCC
Q 011049 374 ARSGSYNKTLTPFGFQTE--------FRTLWEAT-------NVY-----IEMSPITHAN-------KIKKPILIIHGEVD 426 (494)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~-------~~~-----~~~sp~~~~~-------~~~~P~li~~G~~D 426 (494)
+..|+.+........... ....+... ..| ...+|..... +--+|+||++|+.|
T Consensus 217 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~a~~~~~~~lPp~li~~g~~D 296 (358)
T d1jkma_ 217 ASIPYISGGYAWDHERRLTELPSLVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLPPFVVAVNELD 296 (358)
T ss_dssp EESCCCCCCTTSCHHHHHHHCTHHHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCCCEEEEEETTC
T ss_pred cccceeccccCccchhhcccccchhcccccccchhhhhhHHhhcCCccCCccCccccccccchhhccCCCCEEEEECCCC
Confidence 888877643322111100 00000000 011 1112221110 11269999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCC------cccHHHHHHHHHHHHHHhc
Q 011049 427 DKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA------RENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 427 ~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~------~~~~~~~~~~~~~fl~~~l 483 (494)
.+ ..++..++++|++.|+++++++|+++.|+|.. .+..+...+.+..|+..+.
T Consensus 297 ~l----~~e~~~~~~~L~~aGv~v~~~~~~g~~Hgf~~~~~~~~~~~~~~~~~~i~~Fl~~~~ 355 (358)
T d1jkma_ 297 PL----RDEGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 355 (358)
T ss_dssp TT----HHHHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred CC----HHHHHHHHHHHHHCCCcEEEEEECCCccchhhhccccCCHHHHHHHHHHHHHHHHHH
Confidence 75 68899999999999999999999999998621 1233456778888887653
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.88 E-value=6.8e-22 Score=182.69 Aligned_cols=231 Identities=11% Similarity=0.039 Sum_probs=152.9
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeC
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 303 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 303 (494)
+....++..||..+++|.+.|++..+. +.|+||++||.+... . .....+..|+++||.|+.+
T Consensus 4 ~~~h~~~~~dg~~l~~w~~~p~~~~~~---~~~~Vvi~HG~~~~~-----------~----~~~~~a~~L~~~G~~Vi~~ 65 (302)
T d1thta_ 4 TIAHVLRVNNGQELHVWETPPKENVPF---KNNTILIASGFARRM-----------D----HFAGLAEYLSTNGFHVFRY 65 (302)
T ss_dssp CEEEEEEETTTEEEEEEEECCCTTSCC---CSCEEEEECTTCGGG-----------G----GGHHHHHHHHTTTCCEEEE
T ss_pred eeeeEEEcCCCCEEEEEEecCcCCCCC---CCCEEEEeCCCcchH-----------H----HHHHHHHHHHHCCCEEEEe
Confidence 445667889999999999999874443 379999999954211 1 1234667899999999997
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC
Q 011049 304 PSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL 383 (494)
Q Consensus 304 ~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~ 383 (494)
|.+|..|................|+.++++++.+++ .++++|+||||||.+++.+|.. ..++++|+.+|+.+...
T Consensus 66 D~rGh~G~S~g~~~~~~~~~~~~dl~~vi~~l~~~~---~~~i~lvG~SmGG~ial~~A~~--~~v~~li~~~g~~~~~~ 140 (302)
T d1thta_ 66 DSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKG---TQNIGLIAASLSARVAYEVISD--LELSFLITAVGVVNLRD 140 (302)
T ss_dssp CCCBCC--------CCCHHHHHHHHHHHHHHHHHTT---CCCEEEEEETHHHHHHHHHTTT--SCCSEEEEESCCSCHHH
T ss_pred cCCCCCCCCCCcccCCCHHHHHHHHHHHHHhhhccC---CceeEEEEEchHHHHHHHHhcc--cccceeEeecccccHHH
Confidence 777643432222222234567889999999998875 4789999999999999887754 45789999888865210
Q ss_pred ----------CCCCcc---cccc-ccc-ccHHHHH-----h-----cCccccccCCCCCEEEEecCCCCCCCCCHHHHHH
Q 011049 384 ----------TPFGFQ---TEFR-TLW-EATNVYI-----E-----MSPITHANKIKKPILIIHGEVDDKVGLFPMQAER 438 (494)
Q Consensus 384 ----------~~~~~~---~~~~-~~~-~~~~~~~-----~-----~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~ 438 (494)
...... .... ... .....+. . .++...+.++++|+|++||++|..|| ++.+++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~V~--~~~~~~ 218 (302)
T d1thta_ 141 TLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVK--QEEVYD 218 (302)
T ss_dssp HHHHHHSSCGGGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSC--HHHHHH
T ss_pred HHHHHHhhccchhhhhhccccccccccchhhHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEeCCCCccC--HHHHHH
Confidence 000000 0000 000 0001110 0 12455688899999999999999998 998888
Q ss_pred HHHHHHhCCCcEEEEEcCCCCCccCCcccH-HHHHHHHHHHHHH
Q 011049 439 FFDALKGHGALSRLVLLPFEHHVYAARENV-MHVIWETDRWLQK 481 (494)
Q Consensus 439 ~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~-~~~~~~~~~fl~~ 481 (494)
+++.++. .++++.+++|++|.+...... ..+++.+..+...
T Consensus 219 l~~~i~s--~~~kl~~~~g~~H~l~e~~~~~~~~~~~~~~~~~~ 260 (302)
T d1thta_ 219 MLAHIRT--GHCKLYSLLGSSHDLGENLVVLRNFYQSVTKAAIA 260 (302)
T ss_dssp HHTTCTT--CCEEEEEETTCCSCTTSSHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCC--CCceEEEecCCCcccccChHHHHHHHHHHHHHHhh
Confidence 8887753 457999999999998643222 2455566555543
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.88 E-value=4.4e-22 Score=189.97 Aligned_cols=252 Identities=14% Similarity=0.168 Sum_probs=164.3
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEe
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 302 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 302 (494)
..+.+.++.+||++|.+.||+|++ .+++|+||+.|+-+.... .. ...............+.|+++||+|+.
T Consensus 23 ~~~~v~i~~rDG~~L~~~v~~P~~-----~~~~P~il~~~pYg~~~~---~~-~~~~~~~~~~~~~~~~~~a~~Gy~vv~ 93 (381)
T d1mpxa2 23 IKREVMIPMRDGVKLHTVIVLPKG-----AKNAPIVLTRTPYDASGR---TE-RLASPHMKDLLSAGDDVFVEGGYIRVF 93 (381)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETT-----CCSEEEEEEEESSCHHHH---TC-SSCCSSHHHHSCGGGHHHHHTTCEEEE
T ss_pred eEEEEEEECCCCCEEEEEEEEeCC-----CCCccEEEEEccCCCCCc---cc-ccccccccccchhHHHHHHhCCCEEEE
Confidence 457899999999999999999987 345999999985211000 00 000000111112345689999999999
Q ss_pred CCCCCCCCCCCCCCC--------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEe
Q 011049 303 GPSIPIIGEGDKLPN--------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIA 374 (494)
Q Consensus 303 ~~~~~~~g~g~~~~~--------~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~ 374 (494)
+|.||..+++..... .....+.+.|..++|+|+.++..+|.+||+++|+||||++++++|+..|..++|+|+
T Consensus 94 ~d~RG~g~S~G~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~v~ 173 (381)
T d1mpxa2 94 QDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVP 173 (381)
T ss_dssp EECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEE
T ss_pred EecCccCCCCCceeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccccceeee
Confidence 888876554433211 111223578999999999999878889999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcc-----cc---------------------ccccc-------------------------------c
Q 011049 375 RSGSYNKTLTPFGFQ-----TE---------------------FRTLW-------------------------------E 397 (494)
Q Consensus 375 ~~~~~~~~~~~~~~~-----~~---------------------~~~~~-------------------------------~ 397 (494)
.+|+.+.......+. .. ....+ .
T Consensus 174 ~~~~~d~~~~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (381)
T d1mpxa2 174 ESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAA 253 (381)
T ss_dssp ESCCCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHHHTCS
T ss_pred eccccccccccccccCchhhhccHHHHHhhhhhccccchhhhhhhhhHHHHHhcccccccchhhccccchHHHHHhhCCC
Confidence 999887532211100 00 00000 0
Q ss_pred cHHHHHhcCccc--cccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHh---CCCcEEEEEcCCCCCccC---------
Q 011049 398 ATNVYIEMSPIT--HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG---HGALSRLVLLPFEHHVYA--------- 463 (494)
Q Consensus 398 ~~~~~~~~sp~~--~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~---~g~~~~~~~~~~~~H~~~--------- 463 (494)
..+.+...++.. ...++++|+|+++|..|.... ..+...++.++. .+.+.++++-|. +|.-.
T Consensus 254 ~d~~w~~~s~~~~~~~~~i~vP~l~i~G~~d~~~~---~~~~~~~~~~~~~~~~~~~~~LviGPw-~H~~~~~~~~~~~~ 329 (381)
T d1mpxa2 254 YDAFWQEQALDKVMARTPLKVPTMWLQGLWDQEDM---WGAIHSYAAMEPRDKRNTLNYLVMGPW-RHSQVNYDGSALGA 329 (381)
T ss_dssp SCHHHHTTCHHHHHHTSCCCSCEEEEEETTCSSCS---SHHHHHHHHHGGGCTTSSSEEEEEESC-CTTGGGSCCSEETT
T ss_pred ccchhhhcCchhhhhhccccCceEEEeccccCCcc---ccHHHHHHHHHHhccccCCceEEEecC-cCCCCccCCCcCCc
Confidence 002223334433 345688999999999998753 345556666544 356788998887 67421
Q ss_pred ---Cccc-HHHHHHHHHHHHHHhcCCCC
Q 011049 464 ---AREN-VMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 464 ---~~~~-~~~~~~~~~~fl~~~l~~~~ 487 (494)
..+. .......+++||++||++..
T Consensus 330 ~~~~~~~~~~~~~~~~l~wFD~~LKg~~ 357 (381)
T d1mpxa2 330 LNFEGDTARQFRHDVLRPFFDQYLVDGA 357 (381)
T ss_dssp EECSSCHHHHHHHHTHHHHHHHHHSTTC
T ss_pred cccccchhhhhHHHHHHHHHHHHhCCCC
Confidence 1122 22344557899999999754
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.88 E-value=3.9e-22 Score=185.34 Aligned_cols=225 Identities=17% Similarity=0.083 Sum_probs=155.4
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHH-HhCCeEEE
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF-LARRFAVL 301 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~G~~v~ 301 (494)
+++.+++++.+| .++..+|.|++ + .|+||++|||+|..++ ...+. .....+ ++.|++|+
T Consensus 55 ~~~~~~i~~~~g-~i~~~iy~P~~-----~--~P~il~iHGGg~~~g~--------~~~~~----~~~~~l~~~~g~~Vv 114 (311)
T d1jjia_ 55 RVEDRTIKGRNG-DIRVRVYQQKP-----D--SPVLVYYHGGGFVICS--------IESHD----ALCRRIARLSNSTVV 114 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEEESSS-----S--EEEEEEECCSTTTSCC--------TGGGH----HHHHHHHHHHTSEEE
T ss_pred eEEEEEEeCCCC-cEEEEEEcCCC-----C--ceEEEEEcCCCCccCC--------hhhhh----hhhhhhhhcCCcEEE
Confidence 467788888888 89999999964 2 6999999999875433 22221 233444 44699999
Q ss_pred eCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHhC----CCceeEEEe
Q 011049 302 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHA----PHLFCCGIA 374 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~~----p~~~~a~v~ 374 (494)
.++|+...++. ....++|+.++++|+.++ ..+|++||+|+|+|+||++++.++... .....+.++
T Consensus 115 ~v~Yrlap~~~--------~p~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l 186 (311)
T d1jjia_ 115 SVDYRLAPEHK--------FPAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQIL 186 (311)
T ss_dssp EEECCCTTTSC--------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred Eeccccccccc--------cchhhhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhccccccceeee
Confidence 99987654331 134467788888888775 358999999999999999988776443 246788888
Q ss_pred CCCCCCCCCCCCCcccccc-c-ccc---------------cHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHH
Q 011049 375 RSGSYNKTLTPFGFQTEFR-T-LWE---------------ATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAE 437 (494)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~-~-~~~---------------~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~ 437 (494)
++|+.+............. . .+. ........||+....+..+|+||++|+.|.+ ..++.
T Consensus 187 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~l----~d~~~ 262 (311)
T d1jjia_ 187 IYPVVNFVAPTPSLLEFGEGLWILDQKIMSWFSEQYFSREEDKFNPLASVIFADLENLPPALIITAEYDPL----RDEGE 262 (311)
T ss_dssp ESCCCCSSSCCHHHHHTSSSCSSCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCTTCCCEEEEEEEECTT----HHHHH
T ss_pred ecceeeeccCcccccccccccccccHHHhhhhhhhcccccccccccccchhhcccccCCCEEEEEcCCCCC----hHHHH
Confidence 8888774322111100000 0 000 0001112467666555568999999999975 67899
Q ss_pred HHHHHHHhCCCcEEEEEcCCCCCccCCc----ccHHHHHHHHHHHH
Q 011049 438 RFFDALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWL 479 (494)
Q Consensus 438 ~~~~~l~~~g~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~fl 479 (494)
+++++|+++|+++++++|++++|+|... +...+.++++.+||
T Consensus 263 ~~~~~L~~~Gv~v~~~~~~g~~H~F~~~~~~~~~a~~a~~~i~~fl 308 (311)
T d1jjia_ 263 VFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALL 308 (311)
T ss_dssp HHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEEECCCCCccccCCCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999987432 22346677788887
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.88 E-value=8.1e-22 Score=177.32 Aligned_cols=190 Identities=17% Similarity=0.154 Sum_probs=143.6
Q ss_pred CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCC
Q 011049 233 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 312 (494)
Q Consensus 233 dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g 312 (494)
++......||+|++ .+.|+||++|||+|..++.. .+ ...+..|+++||+|+.+++|....
T Consensus 46 ~~~~~~lDiy~P~~------~~~P~vv~iHGG~w~~g~~~--------~~----~~~a~~l~~~G~~Vv~~~YRl~p~-- 105 (261)
T d2pbla1 46 EGDRHKFDLFLPEG------TPVGLFVFVHGGYWMAFDKS--------SW----SHLAVGALSKGWAVAMPSYELCPE-- 105 (261)
T ss_dssp SSTTCEEEEECCSS------SCSEEEEEECCSTTTSCCGG--------GC----GGGGHHHHHTTEEEEEECCCCTTT--
T ss_pred CCcCeEEEEeccCC------CCCCeEEEECCCCCccCChh--------Hh----hhHHHHHhcCCceeeccccccccc--
Confidence 34455667888875 24799999999988654322 12 234567899999999999874322
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCC------CceeEEEeCCCCCCCCCCCC
Q 011049 313 DKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP------HLFCCGIARSGSYNKTLTPF 386 (494)
Q Consensus 313 ~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p------~~~~a~v~~~~~~~~~~~~~ 386 (494)
.. ....++|+.++++|+.++. ++||+|+|||+||+++++++.... ..++++++++|+.+......
T Consensus 106 -----~~-~p~~~~d~~~a~~~~~~~~---~~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (261)
T d2pbla1 106 -----VR-ISEITQQISQAVTAAAKEI---DGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLR 176 (261)
T ss_dssp -----SC-HHHHHHHHHHHHHHHHHHS---CSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGG
T ss_pred -----cc-CchhHHHHHHHHHHHHhcc---cCceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhhh
Confidence 12 3566899999999999885 489999999999999988776542 35789999999877532211
Q ss_pred CcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCC
Q 011049 387 GFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHH 460 (494)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H 460 (494)
.+ .......+++.+...||+.++.+.++|+|++||++|..++ ..|+++++++|+ ++.+++++.+|
T Consensus 177 ~~--~~~~~~~~~~~~~~~SP~~~~~~~~~P~li~~G~~D~~~~--~~qs~~~~~~l~-----~~~~~~~~~~H 241 (261)
T d2pbla1 177 TS--MNEKFKMDADAAIAESPVEMQNRYDAKVTVWVGGAERPAF--LDQAIWLVEAWD-----ADHVIAFEKHH 241 (261)
T ss_dssp ST--THHHHCCCHHHHHHTCGGGCCCCCSCEEEEEEETTSCHHH--HHHHHHHHHHHT-----CEEEEETTCCT
T ss_pred hh--hcccccCCHHHHHHhCchhhcccCCCeEEEEEecCCCchH--HHHHHHHHHHhC-----CCceEeCCCCc
Confidence 11 1111224567788899999999999999999999999887 899999999985 46788999999
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.88 E-value=1.6e-21 Score=176.11 Aligned_cols=209 Identities=16% Similarity=0.089 Sum_probs=134.2
Q ss_pred ccccEEEEEEcC-CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCC--
Q 011049 221 SLQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR-- 297 (494)
Q Consensus 221 ~~~~~~~~~~~~-dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-- 297 (494)
..+.+.++|.+. +|.++++++|+|++++++++ +|+|+++||++....+.. ............+...+
T Consensus 19 ~g~~~~~~~~S~~~g~~~~~~v~lP~~y~~~~~--~Pvvv~lHG~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 88 (255)
T d1jjfa_ 19 RGQVVNISYFSTATNSTRPARVYLPPGYSKDKK--YSVLYLLHGIGGSENDWF--------EGGGRANVIADNLIAEGKI 88 (255)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEECTTCCTTSC--BCEEEEECCTTCCTTTTT--------TTTTCHHHHHHHHHHTTSS
T ss_pred ceEEEEEEEEecCCCCEEEEEEEeCCCCCCCCC--CcEEEEEecCCCChHHhh--------hhhHHHHHHHHHHHhhccC
Confidence 346788888864 78999999999999987665 999999999763321100 01111111111223322
Q ss_pred --eEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc--CCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEE
Q 011049 298 --FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR--GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGI 373 (494)
Q Consensus 298 --~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~--~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v 373 (494)
+.+........ ...............+.+.+.++.++ ..+|+++++++|+|+||++++.++.++|++|++++
T Consensus 89 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~ 164 (255)
T d1jjfa_ 89 KPLIIVTPNTNAA----GPGIADGYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIG 164 (255)
T ss_dssp CCCEEEEECCCCC----CTTCSCHHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEE
T ss_pred Ccceeeecccccc----cccccccccchHHHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCcccEEE
Confidence 33333221111 11111111122222233344555553 34788999999999999999999999999999999
Q ss_pred eCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEE
Q 011049 374 ARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLV 453 (494)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~ 453 (494)
+++|..+... ......++.....+...|+++.||++|..+ ..+++++++|+++|+++++.
T Consensus 165 ~~sg~~~~~~----------------~~~~~~~~~~~~~~~~~~~~i~~G~~D~~~----~~~~~~~~~L~~~g~~~~~~ 224 (255)
T d1jjfa_ 165 PISAAPNTYP----------------NERLFPDGGKAAREKLKLLFIACGTNDSLI----GFGQRVHEYCVANNINHVYW 224 (255)
T ss_dssp EESCCTTSCC----------------HHHHCTTTTHHHHHHCSEEEEEEETTCTTH----HHHHHHHHHHHHTTCCCEEE
T ss_pred EEccCcCCcc----------------cccccccHHHHhhccCCcceEEeCCCCCCc----hHHHHHHHHHHHCCCCEEEE
Confidence 9998654211 000111122223334589999999999985 45779999999999999999
Q ss_pred EcCCCCCccC
Q 011049 454 LLPFEHHVYA 463 (494)
Q Consensus 454 ~~~~~~H~~~ 463 (494)
++++++|.+.
T Consensus 225 ~~~~ggH~~~ 234 (255)
T d1jjfa_ 225 LIQGGGHDFN 234 (255)
T ss_dssp EETTCCSSHH
T ss_pred EECCCCcCHH
Confidence 9999999763
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.87 E-value=1.1e-21 Score=182.48 Aligned_cols=233 Identities=17% Similarity=0.119 Sum_probs=152.9
Q ss_pred cccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCC-eEE
Q 011049 222 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR-FAV 300 (494)
Q Consensus 222 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-~~v 300 (494)
..++.++++. +|.++.+.+|+|++.+ +++|+||++|||+|..++. ..+ ......++.+| +.|
T Consensus 44 ~~~~~~~~~~-~g~~i~~~~y~P~~~~----~~~Pvvv~iHGGg~~~g~~--------~~~----~~~~~~~a~~~~~~v 106 (308)
T d1u4na_ 44 AEVREFDMDL-PGRTLKVRMYRPEGVE----PPYPALVYYHGGGWVVGDL--------ETH----DPVCRVLAKDGRAVV 106 (308)
T ss_dssp SEEEEEEEEE-TTEEEEEEEEECTTCC----SSEEEEEEECCSTTTSCCT--------TTT----HHHHHHHHHHHTSEE
T ss_pred CcEEEEEEec-CCceEEEEEEeccccC----CCCCEEEEEecCeeeeecc--------ccc----cchhhhhhhcccccc
Confidence 3466777774 7889999999998742 3589999999998754322 111 23445666665 556
Q ss_pred EeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEecChHHHHHHHHHHhCCC----ceeEEE
Q 011049 301 LAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPH----LFCCGI 373 (494)
Q Consensus 301 ~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~~~p~----~~~a~v 373 (494)
+.++++-.... ......+|+..+++|+.++. .+|++||+|+|+|+||++++.++....+ .+.+..
T Consensus 107 ~~v~Yrl~p~~--------~~p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~ 178 (308)
T d1u4na_ 107 FSVDYRLAPEH--------KFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQL 178 (308)
T ss_dssp EEECCCCTTTS--------CTTHHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEE
T ss_pred ccccccccccc--------ccccccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCccccc
Confidence 66777543221 12345778899999998754 5899999999999999999988876532 334455
Q ss_pred eCCCCCCCCCCCCCcc-ccccccc-----------------ccHHHHHhcCccccccCCC-CCEEEEecCCCCCCCCCHH
Q 011049 374 ARSGSYNKTLTPFGFQ-TEFRTLW-----------------EATNVYIEMSPITHANKIK-KPILIIHGEVDDKVGLFPM 434 (494)
Q Consensus 374 ~~~~~~~~~~~~~~~~-~~~~~~~-----------------~~~~~~~~~sp~~~~~~~~-~P~li~~G~~D~~v~~~~~ 434 (494)
...+..+......... ......+ .........++....+... +|+||+||+.|.+ ..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~d~~~~Pp~li~~g~~D~l----~~ 254 (308)
T d1u4na_ 179 LIYPSTGYDPAHPPASIEENAEGYLLTGGMSLWFLDQYLNSLEELTHPWFSPVLYPDLSGLPPAYIATAQYDPL----RD 254 (308)
T ss_dssp EESCCCCCCTTSCCHHHHHTSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTCCCEEEEEEEECTT----HH
T ss_pred ccccccccccccccchhhhccccccccchhhhhhhhcccCccccccchhhhhhhchhhcCCCCeeEEecCcCCc----hH
Confidence 5555443221111100 0000000 0001111123333333333 5899999999965 67
Q ss_pred HHHHHHHHHHhCCCcEEEEEcCCCCCccCCc----ccHHHHHHHHHHHHHHhc
Q 011049 435 QAERFFDALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 435 ~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~fl~~~l 483 (494)
+++.++++|++.|+++++++|++++|+|... +...+.++++.+||++.|
T Consensus 255 ~~~~~~~~L~~~G~~v~~~~~~g~~Hgf~~~~~~~~~a~~~~~~~~~fl~~~L 307 (308)
T d1u4na_ 255 VGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL 307 (308)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCEeCcccCCCCHHHHHHHHHHHHHHHHhh
Confidence 8999999999999999999999999997432 233577888999999876
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.87 E-value=6.1e-21 Score=165.78 Aligned_cols=189 Identities=16% Similarity=0.122 Sum_probs=135.7
Q ss_pred EEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCC-----
Q 011049 241 LYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL----- 315 (494)
Q Consensus 241 l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~----- 315 (494)
++.|.. +.++|+||++||.+. +...|. ..... ...++.|+.++.....+.+...
T Consensus 5 i~~~~~-----~~~~P~vi~lHG~g~-----------~~~~~~----~~~~~-l~~~~~vv~p~~~~~~~~~~~~~~~~~ 63 (202)
T d2h1ia1 5 VFQKGK-----DTSKPVLLLLHGTGG-----------NELDLL----PLAEI-VDSEASVLSVRGNVLENGMPRFFRRLA 63 (202)
T ss_dssp EEECCS-----CTTSCEEEEECCTTC-----------CTTTTH----HHHHH-HHTTSCEEEECCSEEETTEEESSCEEE
T ss_pred cCCCCC-----CCCCCEEEEECCCCC-----------CHHHHH----HHHHH-hccCCceeeecccccCCCCccccccCC
Confidence 555643 234799999999641 112221 22333 4467778775432111111000
Q ss_pred ---CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCccccc
Q 011049 316 ---PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEF 392 (494)
Q Consensus 316 ---~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~ 392 (494)
..........+++...++++.++..+|++||+++|+|+||++++.++..+|+++.++++.+|.....
T Consensus 64 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~---------- 133 (202)
T d2h1ia1 64 EGIFDEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRR---------- 133 (202)
T ss_dssp TTEECHHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCS----------
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhccccccceeeecccccchHHHHHHHhccccccceeeecCCCCcc----------
Confidence 0111233446678888888888888999999999999999999999999999999999999864321
Q ss_pred ccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHH
Q 011049 393 RTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVI 472 (494)
Q Consensus 393 ~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~ 472 (494)
+.........|++++||++|++|| +.++++++++|++.|.++++++||+ +|.+. .+.+
T Consensus 134 --------------~~~~~~~~~~~~~i~~G~~D~~vp--~~~~~~~~~~l~~~g~~~~~~~~~g-gH~~~-----~~~~ 191 (202)
T d2h1ia1 134 --------------GMQLANLAGKSVFIAAGTNDPICS--SAESEELKVLLENANANVTMHWENR-GHQLT-----MGEV 191 (202)
T ss_dssp --------------SCCCCCCTTCEEEEEEESSCSSSC--HHHHHHHHHHHHTTTCEEEEEEESS-TTSCC-----HHHH
T ss_pred --------------cccccccccchhhcccccCCCccC--HHHHHHHHHHHHHCCCCEEEEEECC-CCcCC-----HHHH
Confidence 111223446899999999999998 9999999999999999999999997 89875 2557
Q ss_pred HHHHHHHHHh
Q 011049 473 WETDRWLQKY 482 (494)
Q Consensus 473 ~~~~~fl~~~ 482 (494)
+.+.+||++.
T Consensus 192 ~~~~~wl~k~ 201 (202)
T d2h1ia1 192 EKAKEWYDKA 201 (202)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 7899999885
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.87 E-value=4.3e-21 Score=171.32 Aligned_cols=224 Identities=18% Similarity=0.114 Sum_probs=144.0
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEe
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 302 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 302 (494)
++|++++ .| +......|.+ +.|+||++||.+.+ ...+. ..+..|+++||.|++
T Consensus 4 ~~~~~~l---~g--~~~~~~~p~~-------~~~~vl~lHG~~~~-----------~~~~~----~~~~~la~~G~~V~~ 56 (238)
T d1ufoa_ 4 RTERLTL---AG--LSVLARIPEA-------PKALLLALHGLQGS-----------KEHIL----ALLPGYAERGFLLLA 56 (238)
T ss_dssp EEEEEEE---TT--EEEEEEEESS-------CCEEEEEECCTTCC-----------HHHHH----HTSTTTGGGTEEEEE
T ss_pred EEEEEEE---CC--EEEEecCCCC-------CCeEEEEeCCCCCC-----------HHHHH----HHHHHHHHCCCEEEE
Confidence 4556555 34 5555666643 26999999996521 11122 233467889999999
Q ss_pred CCCCCCCCCCCCC---CCchhHHHH----HHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeC
Q 011049 303 GPSIPIIGEGDKL---PNDRFVEQL----VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIAR 375 (494)
Q Consensus 303 ~~~~~~~g~g~~~---~~~~~~~~~----~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~ 375 (494)
+|.++........ ....+.... ..++.++...+...+.+++++++++|+|+||++++.++..+|+. +++++.
T Consensus 57 ~D~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~~-~~~~~~ 135 (238)
T d1ufoa_ 57 FDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRP-RGVLAF 135 (238)
T ss_dssp CCCTTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCC-SCEEEE
T ss_pred ecCCCCCCCcccccccccchhhhhhhhhHHhHHHHHHHHhhhccccCCceEEEEEecccHHHHHHHHhcCcch-hheeee
Confidence 8776432211111 111222222 22333333344444557789999999999999999999999765 455554
Q ss_pred CCCCCCCCCCCCcccccccccccHHHHHhcCccccccC-CCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCC--cEEE
Q 011049 376 SGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANK-IKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGA--LSRL 452 (494)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~-~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~--~~~~ 452 (494)
.+........ ............+.+.++.....+ .++|+|++||++|..|| +.++.+++++|++.+. .+++
T Consensus 136 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~ 209 (238)
T d1ufoa_ 136 IGSGFPMKLP----QGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVP--LARMEKTLEALRPHYPEGRLAR 209 (238)
T ss_dssp SCCSSCCCCC----TTCCCCCHHHHHHHHSCGGGCGGGGTTCCEEEEEETTCTTTT--HHHHHHHHHHHGGGCTTCCEEE
T ss_pred eeeccccccc----cccccccccccchhhhhhhhhhhhhcCCCeEEEEcCCCCccC--HHHHHHHHHHHHhcCCCceEEE
Confidence 4433321111 111112223344456677666555 46899999999999998 9999999999998876 4788
Q ss_pred EEcCCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 453 VLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 453 ~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
.+++|++|.+.. ..++.+.+||.+||..
T Consensus 210 ~~~~g~gH~~~~-----~~~~~~~~f~~~~l~~ 237 (238)
T d1ufoa_ 210 FVEEGAGHTLTP-----LMARVGLAFLEHWLEA 237 (238)
T ss_dssp EEETTCCSSCCH-----HHHHHHHHHHHHHHHC
T ss_pred EEECCCCCccCH-----HHHHHHHHHHHHHhcC
Confidence 999999998752 4567788999999864
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.87 E-value=1.1e-20 Score=181.68 Aligned_cols=195 Identities=21% Similarity=0.193 Sum_probs=143.3
Q ss_pred hhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCC--------------CCcEEEEecCh
Q 011049 288 TSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVAD--------------PSRIAVGGHSY 353 (494)
Q Consensus 288 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d--------------~~ri~i~G~S~ 353 (494)
...++|+.+||+|+..+.||..++++.. ..+..+..+|..++|+|+.++...+ ..||+++|+||
T Consensus 127 ~~~~~~~~~GYavv~~D~RG~g~S~G~~--~~~~~~e~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY 204 (405)
T d1lnsa3 127 SLNDYFLTRGFASIYVAGVGTRSSDGFQ--TSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSY 204 (405)
T ss_dssp HHHHHHHTTTCEEEEECCTTSTTSCSCC--CTTSHHHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETH
T ss_pred cchHHHHhCCCEEEEECCCCCCCCCCcc--ccCChhhhhhHHHHHHHHHhcccccccccccccccccccCCeeEEEecCH
Confidence 3456899999999998887765554432 2233456889999999998754322 24899999999
Q ss_pred HHHHHHHHHHhCCCceeEEEeCCCCCCCCC---------CCCCcccc-----------c---------------------
Q 011049 354 GAFMTAHLLAHAPHLFCCGIARSGSYNKTL---------TPFGFQTE-----------F--------------------- 392 (494)
Q Consensus 354 GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~---------~~~~~~~~-----------~--------------------- 392 (494)
||++++.+|+..|..++|+|+.+++.+... ....+... .
T Consensus 205 ~G~~q~~aA~~~pp~LkAivp~~~~~d~y~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (405)
T d1lnsa3 205 LGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLAEM 284 (405)
T ss_dssp HHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGGSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCccceEEEecCccccHHHHhhcCCccccccchhhhhhhhhhccccccccccchhhhchhhhhhccchh
Confidence 999999999999999999999999877310 00000000 0
Q ss_pred -----ccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCccc
Q 011049 393 -----RTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAREN 467 (494)
Q Consensus 393 -----~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 467 (494)
.......+.|.+.+++.++++|++|+|+++|..|..++ ..++.+++++|++ +.+.++++.|. +|.......
T Consensus 285 ~~~~~~~~~~~d~~w~~~s~~~~~~~I~vP~L~i~Gw~D~~v~--~~~~~~~y~al~~-~~~~~Lilgpw-~H~~~~~~~ 360 (405)
T d1lnsa3 285 TAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVT--PEQAYNFWKALPE-GHAKHAFLHRG-AHIYMNSWQ 360 (405)
T ss_dssp HHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSC--THHHHHHHHHSCT-TCCEEEEEESC-SSCCCTTBS
T ss_pred hhhhhhccccchhhhhhcChhhhhhcCCCCEEEEEeccCCCCC--HHHHHHHHHHHHh-CCCcEEEEeCC-CCCCCcccc
Confidence 00011224567789999999999999999999999988 8999999999964 56778888886 787543333
Q ss_pred HHHHHHHHHHHHHHhcCCCCC
Q 011049 468 VMHVIWETDRWLQKYCLSNTS 488 (494)
Q Consensus 468 ~~~~~~~~~~fl~~~l~~~~~ 488 (494)
..++.+.+++||++||++...
T Consensus 361 ~~d~~~~~~~wFD~~LkG~~n 381 (405)
T d1lnsa3 361 SIDFSETINAYFVAKLLDRDL 381 (405)
T ss_dssp SCCHHHHHHHHHHHHHTTCCC
T ss_pred cchHHHHHHHHHHHHhCCCCC
Confidence 346677889999999998654
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=99.86 E-value=1e-21 Score=176.33 Aligned_cols=232 Identities=13% Similarity=0.024 Sum_probs=150.5
Q ss_pred CcccccccEEEEEEcC-CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh
Q 011049 217 PTLASLQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA 295 (494)
Q Consensus 217 ~~~~~~~~~~~~~~~~-dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 295 (494)
|+....+++.+++.|. .|.++.+++|+|+++++. ++|+||++||+++... .. .......+.+
T Consensus 8 p~~~~~~~~~~~~~S~~lg~~~~~~v~~P~~~~~~---~~Pvvv~lhG~~~~~~-------------~~-~~~~l~~l~~ 70 (246)
T d3c8da2 8 PQAPEIPAKEIIWKSERLKNSRRVWIFTTGDVTAE---ERPLAVLLDGEFWAQS-------------MP-VWPVLTSLTH 70 (246)
T ss_dssp CCCCSSCCEEEEEEETTTTEEEEEEEEEC-----C---CCCEEEESSHHHHHHT-------------SC-CHHHHHHHHH
T ss_pred CCCCCCCcEEEEEECCCCCCEEEEEEEECCCCCCC---CCCEEEEeCCcchhcc-------------Cc-HHHHHHHHHH
Confidence 3344456788889875 488999999999998643 3999999999753210 00 1122345566
Q ss_pred CC----eEEEeCCCCCCCCCC-CCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCcee
Q 011049 296 RR----FAVLAGPSIPIIGEG-DKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFC 370 (494)
Q Consensus 296 ~G----~~v~~~~~~~~~g~g-~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~ 370 (494)
+| ++++.++........ ....+..+.....+++...++... ...+|+++++|+|+|+||++|+.++.++|++|+
T Consensus 71 ~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~v~~~~-~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~ 149 (246)
T d3c8da2 71 RQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKVIA-PFSDRADRTVVAGQSFGGLSALYAGLHWPERFG 149 (246)
T ss_dssp TTSSCSCEEEEECCCSHHHHHHHSSSCHHHHHHHHHTHHHHHHHHS-CCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCC
T ss_pred hCCCCceEEeecccccccccccccCccHHHHHHHHHHhhhHHHHhc-ccccCccceEEEecCchhHHHhhhhccCCchhc
Confidence 65 334442221110000 001223344444455554444322 233788999999999999999999999999999
Q ss_pred EEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcE
Q 011049 371 CGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALS 450 (494)
Q Consensus 371 a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~ 450 (494)
++++++|..+..... ......+...++.....+...|+++.+|+.|..+ ..++++|+++|+++|.++
T Consensus 150 a~~~~sg~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~D~~~---~~~~~~l~~~L~~~g~~~ 216 (246)
T d3c8da2 150 CVLSQSGSYWWPHRG----------GQQEGVLLEKLKAGEVSAEGLRIVLEAGIREPMI---MRANQALYAQLHPIKESI 216 (246)
T ss_dssp EEEEESCCTTTTCTT----------SSSCCHHHHHHHTTSSCCCSCEEEEEEESSCHHH---HHHHHHHHHHTGGGTTSE
T ss_pred EEEcCCcccccccCC----------ccchHHHHHHhhhhhhhccCCCeEEEecCCCcch---hHHHHHHHHHHHHCCCCE
Confidence 999999976543211 1112233344556667777899999999999876 678899999999999999
Q ss_pred EEEEcCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 451 RLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 451 ~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
++.+++| ||.+. .+...+...+.||-+.|
T Consensus 217 ~~~~~~G-gH~~~---~W~~~l~~~l~~l~~~~ 245 (246)
T d3c8da2 217 FWRQVDG-GHDAL---CWRGGLMQGLIDLWQPL 245 (246)
T ss_dssp EEEEESC-CSCHH---HHHHHHHHHHHHHHGGG
T ss_pred EEEEeCC-CCChH---HHHHHHHHHHHHHHHhh
Confidence 9999998 89753 34455555666665443
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=8.1e-20 Score=161.55 Aligned_cols=136 Identities=19% Similarity=0.195 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHH
Q 011049 322 EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNV 401 (494)
Q Consensus 322 ~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (494)
....+.+...++.+.+.+ +|++||+++|+|+||.+|+.++.++|++|+++|+++|...... .+.
T Consensus 90 ~~~~~~l~~li~~~~~~~-i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~---~~~------------ 153 (229)
T d1fj2a_ 90 KQAAENIKALIDQEVKNG-IPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRA---SFP------------ 153 (229)
T ss_dssp HHHHHHHHHHHHHHHHTT-CCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGG---GSC------------
T ss_pred HHHHHHHHHHhhhhhhcC-CCccceeeeecccchHHHHHHHHhhccccCccccccccccccc---ccc------------
Confidence 344455555666665554 8999999999999999999999999999999999988532100 000
Q ss_pred HHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHh--CCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 402 YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG--HGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 402 ~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~--~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
.++ ....+.++|+|++||++|.+|| +..+++.++.|++ .+.++++++|++.+|.+.. +.++.+.+||
T Consensus 154 ---~~~-~~~~~~~~Pvli~hG~~D~~vp--~~~~~~~~~~L~~~~~~~~v~~~~~~g~gH~i~~-----~~~~~~~~wL 222 (229)
T d1fj2a_ 154 ---QGP-IGGANRDISILQCHGDCDPLVP--LMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQ-----QEMMDVKQFI 222 (229)
T ss_dssp ---SSC-CCSTTTTCCEEEEEETTCSSSC--HHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCCH-----HHHHHHHHHH
T ss_pred ---ccc-cccccccCceeEEEcCCCCeeC--HHHHHHHHHHHHhcCCCCceEEEEeCCCCCccCH-----HHHHHHHHHH
Confidence 000 1112235899999999999998 9999999999987 4678999999999998752 4577899999
Q ss_pred HHhcC
Q 011049 480 QKYCL 484 (494)
Q Consensus 480 ~~~l~ 484 (494)
+++|.
T Consensus 223 ~~~Lp 227 (229)
T d1fj2a_ 223 DKLLP 227 (229)
T ss_dssp HHHSC
T ss_pred HhHCc
Confidence 99985
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.84 E-value=5.6e-20 Score=175.77 Aligned_cols=255 Identities=15% Similarity=0.123 Sum_probs=163.2
Q ss_pred cccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 222 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 222 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
+..+.|.++.+||++|.+.||+|++ .+++|+||..|+=+...... ..................|+++||+|+
T Consensus 26 ~~~~~v~ipmrDG~~L~~~v~~P~~-----~~~~P~il~~tpY~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~Gy~vv 97 (385)
T d2b9va2 26 YIKREVMVPMRDGVKLYTVIVIPKN-----ARNAPILLTRTPYNAKGRAN---RVPNALTMREVLPQGDDVFVEGGYIRV 97 (385)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETT-----CCSEEEEEEEESSCHHHHTC---SSTTCSSHHHHSCGGGHHHHHTTCEEE
T ss_pred CeEeEEEEECCCCCEEEEEEEEcCC-----CCceeEEEEEccCCCCCccc---cCCcccccccccchHHHHHHhCCcEEE
Confidence 4567899999999999999999986 34599999876421100000 000000001111234568999999999
Q ss_pred eCCCCCCCCCCCCCCC--------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEE
Q 011049 302 AGPSIPIIGEGDKLPN--------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGI 373 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~--------~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v 373 (494)
.++.||..+++..+.. ..+.....+|..++|+|+.++..++..||+++|+||||++++.+|+..|..++|++
T Consensus 98 ~~d~RG~g~S~G~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a~~ 177 (385)
T d2b9va2 98 FQDIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAA 177 (385)
T ss_dssp EEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEE
T ss_pred EEcCCcccCCCCceeeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCcceEEE
Confidence 9888876555443211 11223457899999999999977788999999999999999999999999999999
Q ss_pred eCCCCCCCCCCCCCcc----------------------c----ccccccc------------------------------
Q 011049 374 ARSGSYNKTLTPFGFQ----------------------T----EFRTLWE------------------------------ 397 (494)
Q Consensus 374 ~~~~~~~~~~~~~~~~----------------------~----~~~~~~~------------------------------ 397 (494)
+.+++.+......... . .....+.
T Consensus 178 ~~~~~~d~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p 257 (385)
T d2b9va2 178 PESPMVDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHAHP 257 (385)
T ss_dssp EEEECCCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHHCC
T ss_pred EecccccccccccccCCchhccccHHHHHhhhhhcccCccccccchHHHHHHHHhccccccchhcccchhhhhhhhccCc
Confidence 9888766422110000 0 0000000
Q ss_pred -cHHHHHhcCccccc--cCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC--CcEEEEEcCCCCCccCC--------
Q 011049 398 -ATNVYIEMSPITHA--NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG--ALSRLVLLPFEHHVYAA-------- 464 (494)
Q Consensus 398 -~~~~~~~~sp~~~~--~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~H~~~~-------- 464 (494)
..+.+...++...+ .++.+|+|++.|..|... ...+.+.++.|+... .+.++++-|. +|....
T Consensus 258 ~~d~~w~~~s~~~~~~~~~i~vP~l~~~g~~dd~~---~~g~~~~~~~l~~~~~~~~~~LiiGPw-~H~~~~~~~~~~g~ 333 (385)
T d2b9va2 258 AYDAFWQGQALDKILAQRKPTVPMLWEQGLWDQED---MWGAIHAWQALKDADVKAPNTLVMGPW-RHSGVNYNGSTLGP 333 (385)
T ss_dssp SSSHHHHTTCHHHHHHHHCCCSCEEEEEETTCSSC---SSHHHHHHHHHHHTTCSSCEEEEEESC-CTTGGGSCCSEETT
T ss_pred ccchhhhhcChhHHHhhccccCceEEEEecccCCc---ccchHHHHHHHHhhccCCCcEEEEeCC-cCCCcccccccccc
Confidence 00222334443333 356789999999877653 455667888887654 5678888776 564211
Q ss_pred ----cc-cHHHHHHHHHHHHHHhcCCCCC
Q 011049 465 ----RE-NVMHVIWETDRWLQKYCLSNTS 488 (494)
Q Consensus 465 ----~~-~~~~~~~~~~~fl~~~l~~~~~ 488 (494)
.+ ........+++||++||++...
T Consensus 334 ~~~~~~~~~~~~~~~~l~WFD~~LKG~~~ 362 (385)
T d2b9va2 334 LEFEGDTAHQYRRDVFRPFFDEYLKPGSA 362 (385)
T ss_dssp EECSSCHHHHHHHHTHHHHHHHHHSTTCC
T ss_pred cccCcccchhhHHHHHHHHHHHHcCCCCC
Confidence 11 1223445578999999998654
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.83 E-value=1.2e-18 Score=152.35 Aligned_cols=212 Identities=18% Similarity=0.178 Sum_probs=154.8
Q ss_pred EEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCC
Q 011049 227 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI 306 (494)
Q Consensus 227 ~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~ 306 (494)
|.++..+| +|++++..|+. .+.|++|++||.+... ++.+ .......+..|+++||.|+..|+|
T Consensus 3 v~i~g~~G-~Le~~~~~~~~------~~~~~~l~~Hp~p~~G--------G~~~--~~~~~~~a~~l~~~G~~~lrfn~R 65 (218)
T d2i3da1 3 VIFNGPAG-RLEGRYQPSKE------KSAPIAIILHPHPQFG--------GTMN--NQIVYQLFYLFQKRGFTTLRFNFR 65 (218)
T ss_dssp EEEEETTE-EEEEEEECCSS------TTCCEEEEECCCGGGT--------CCTT--SHHHHHHHHHHHHTTCEEEEECCT
T ss_pred EEEeCCCc-cEEEEEeCCCC------CCCCEEEEECCCcCcC--------CcCC--cHHHHHHHHHHHhcCeeEEEEecC
Confidence 66888898 89998764432 2368999999865211 2111 111123455788999999997766
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCC
Q 011049 307 PIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF 386 (494)
Q Consensus 307 ~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~ 386 (494)
+ .|.+...........+|..++++|+..+... ..++.++|+|+||.+++.++.+.+ ...++++..+.....
T Consensus 66 G---~g~S~G~~~~~~~e~~d~~aa~~~~~~~~~~-~~~~~~~g~S~G~~~a~~~a~~~~-~~~~~~~~~~~~~~~---- 136 (218)
T d2i3da1 66 S---IGRSQGEFDHGAGELSDAASALDWVQSLHPD-SKSCWVAGYSFGAWIGMQLLMRRP-EIEGFMSIAPQPNTY---- 136 (218)
T ss_dssp T---STTCCSCCCSSHHHHHHHHHHHHHHHHHCTT-CCCEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTTS----
T ss_pred c---cCCCccccccchhHHHHHHHHHhhhhccccc-ccceeEEeeehHHHHHHHHHHhhc-cccceeecccccccc----
Confidence 4 4444444344456678999999999988753 357899999999999999998884 556666666643311
Q ss_pred CcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHh-CCCcEEEEEcCCCCCccCCc
Q 011049 387 GFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG-HGALSRLVLLPFEHHVYAAR 465 (494)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~H~~~~~ 465 (494)
+...+.....|+|++||+.|..++ ..+..++++.++. ++...++++++|++|.|.
T Consensus 137 --------------------~~~~~~~~~~p~l~i~g~~D~~~~--~~~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~-- 192 (218)
T d2i3da1 137 --------------------DFSFLAPCPSSGLIINGDADKVAP--EKDVNGLVEKLKTQKGILITHRTLPGANHFFN-- 192 (218)
T ss_dssp --------------------CCTTCTTCCSCEEEEEETTCSSSC--HHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT--
T ss_pred --------------------chhhccccCCCceeeecccceecC--hHHHHHHHHHHhhccCCCccEEEeCCCCCCCc--
Confidence 111234456899999999999998 9999999999986 467789999999999886
Q ss_pred ccHHHHHHHHHHHHHHhcCCCCC
Q 011049 466 ENVMHVIWETDRWLQKYCLSNTS 488 (494)
Q Consensus 466 ~~~~~~~~~~~~fl~~~l~~~~~ 488 (494)
.....+.+.+.+||+++|.+...
T Consensus 193 g~~~~l~~~v~~~l~~~l~~~~~ 215 (218)
T d2i3da1 193 GKVDELMGECEDYLDRRLNGELV 215 (218)
T ss_dssp TCHHHHHHHHHHHHHHHHTTCSS
T ss_pred CCHHHHHHHHHHHHHHhcCCCCC
Confidence 34567888999999999987644
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=99.83 E-value=5.1e-21 Score=173.83 Aligned_cols=206 Identities=12% Similarity=0.042 Sum_probs=142.0
Q ss_pred ccEEEEEEcCCCc-eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 223 QKEMIKYQRKDGV-PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 223 ~~~~~~~~~~dg~-~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
+.+.++|++.||. ++.++|++|+++++.++ +|+|+++||+++... . ......+..+.+|++|+
T Consensus 12 ~~~~~~~~s~dg~~~~~~~v~~P~~~~~~~~--yPvi~~lhG~~~~~~--------~------~~~~~~~~~~~~~~~vV 75 (265)
T d2gzsa1 12 HFSATSFDSVDGTRHYRVWTAVPNTTAPASG--YPILYMLDGNAVMDR--------L------DDELLKQLSEKTPPVIV 75 (265)
T ss_dssp EEEEEEEECTTSSCEEEEEEEEESSCCCTTC--EEEEEESSHHHHHHH--------C------CHHHHHHHTTSCCCEEE
T ss_pred eeEEEEEEcCCCCEEEEEEEEcCCCCCCCCC--ceEEEEecCcchhhh--------H------HHHHHHHHHhcCCCeEE
Confidence 5788999999984 79999999999987665 999999999642110 0 00112223355788888
Q ss_pred eCCCCCCCCCCCC----------------------CCCchhHHHHHH-HHHHHHHHHHHcCCCCCCcEEEEecChHHHHH
Q 011049 302 AGPSIPIIGEGDK----------------------LPNDRFVEQLVS-SAEAAVEEVVRRGVADPSRIAVGGHSYGAFMT 358 (494)
Q Consensus 302 ~~~~~~~~g~g~~----------------------~~~~~~~~~~~~-d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a 358 (494)
.+.+++..+++.. ............ ....++.++.++..+|+++++|+|+|+||+++
T Consensus 76 ~v~~~~~~~~~~~~r~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~G~S~GG~~a 155 (265)
T d2gzsa1 76 AVGYQTNLPFDLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFV 155 (265)
T ss_dssp EEEESSSSSCCHHHHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHH
T ss_pred EecCCCCCcCcccccccccccccCcccccccccchhccccchHHHHHHHHHHHHHHHHHhcCCCcCceEEEeccHHHHHH
Confidence 7544433222110 000000111111 22345566777777899999999999999999
Q ss_pred HHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCC--------CCCCC
Q 011049 359 AHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEV--------DDKVG 430 (494)
Q Consensus 359 ~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~--------D~~v~ 430 (494)
+.++.+. +.|.++++.+|... |.....+...++.......+.|+++.+|+. |.+++
T Consensus 156 ~~~~~~~-~~f~~~~a~s~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~~ 219 (265)
T d2gzsa1 156 LDSWLSS-SYFRSYYSASPSLG---------------RGYDALLSRVTAVEPLQFCTKHLAIMEGSATQGDNRETHAVGV 219 (265)
T ss_dssp HHHHHHC-SSCSEEEEESGGGS---------------TTHHHHHHHHHTSCTTTTTTCEEEEEECCC-----------CH
T ss_pred HHHHHcC-cccCEEEEECCccc---------------ccchhhhhccccccccccCCCcEEEEcCCcccccccccccchh
Confidence 9988775 77888888888532 234444555566666677778999999977 66666
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEEcCCCCCcc
Q 011049 431 LFPMQAERFFDALKGHGALSRLVLLPFEHHVY 462 (494)
Q Consensus 431 ~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 462 (494)
..++++++++|+++|+++++.+|||++|+.
T Consensus 220 --~~~~~~l~~~L~~~g~~~~~~~~pG~~Hg~ 249 (265)
T d2gzsa1 220 --LSKIHTTLTILKDKGVNAVFWDFPNLGHGP 249 (265)
T ss_dssp --HHHHHHHHHHHHHTTCCEEEEECTTCCHHH
T ss_pred --HHHHHHHHHHHHHCCCCEEEEEcCCCCcch
Confidence 889999999999999999999999999974
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.82 E-value=3e-19 Score=170.35 Aligned_cols=240 Identities=16% Similarity=0.120 Sum_probs=150.1
Q ss_pred ccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCC--chhHHHHHhCCe
Q 011049 221 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMT--PTSSLIFLARRF 298 (494)
Q Consensus 221 ~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~G~ 298 (494)
.++.|...+++.||..|..+.+........+.++.|+||++||.+.++ ..|.... ...+..|+++||
T Consensus 24 ~y~~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~-----------~~~~~~~~~~sla~~L~~~Gy 92 (377)
T d1k8qa_ 24 GYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASA-----------TNWISNLPNNSLAFILADAGY 92 (377)
T ss_dssp TCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCG-----------GGGSSSCTTTCHHHHHHHTTC
T ss_pred CCCceEEEEEcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccch-----------hHHhhcCccchHHHHHHHCCC
Confidence 356788999999998887765532222222345579999999975322 2232211 235668899999
Q ss_pred EEEeCCCCCCCCCCCCCC------------CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCC
Q 011049 299 AVLAGPSIPIIGEGDKLP------------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP 366 (494)
Q Consensus 299 ~v~~~~~~~~~g~g~~~~------------~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p 366 (494)
.|+++|.| |+|.+.. ...+.+....|+.++++++.+.-. .+++.++|||+||.+++.++..+|
T Consensus 93 ~V~~~D~r---G~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g--~~~v~lvGhS~GG~ia~~~a~~~p 167 (377)
T d1k8qa_ 93 DVWLGNSR---GNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTG--QDKLHYVGHSQGTTIGFIAFSTNP 167 (377)
T ss_dssp EEEECCCT---TSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHC--CSCEEEEEETHHHHHHHHHHHHCH
T ss_pred EEEEEcCC---CCCCCCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcC--CCCEEEEEecchHHHHHHHHHhhh
Confidence 99996665 4554421 112334456788999999887632 368999999999999999999998
Q ss_pred CceeEEEe---CCCCCCCCCCCCCcc-----------------------------------ccc-----------cccc-
Q 011049 367 HLFCCGIA---RSGSYNKTLTPFGFQ-----------------------------------TEF-----------RTLW- 396 (494)
Q Consensus 367 ~~~~a~v~---~~~~~~~~~~~~~~~-----------------------------------~~~-----------~~~~- 396 (494)
+.++.+++ ..+............ ... ...|
T Consensus 168 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (377)
T d1k8qa_ 168 KLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFD 247 (377)
T ss_dssp HHHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCC
T ss_pred hhhhhceeEeeccccccccchhhHHHHHHhcchhhhhhhhhhhhccchhHHHHhhhhhhcchhhhhHHHHhhhhhhcCCC
Confidence 76554443 222211000000000 000 0000
Q ss_pred ------ccHHHHH-----------------------------------------hcCccccccCCCCCEEEEecCCCCCC
Q 011049 397 ------EATNVYI-----------------------------------------EMSPITHANKIKKPILIIHGEVDDKV 429 (494)
Q Consensus 397 ------~~~~~~~-----------------------------------------~~sp~~~~~~~~~P~li~~G~~D~~v 429 (494)
.....+. ...+...+.++++|+|+++|++|..+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~~D~~~ 327 (377)
T d1k8qa_ 248 TMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLA 327 (377)
T ss_dssp GGGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSS
T ss_pred cccccHHHhhhhhhcccccchHHHHHHHHHHHhcCcchhccchhhhhhhhhhcccCchhhhHhhCCCCEEEEEeCCCCcc
Confidence 0000000 00122245778999999999999998
Q ss_pred CCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCc--cCCcccHHHHHHHHHHHHHH
Q 011049 430 GLFPMQAERFFDALKGHGALSRLVLLPFEHHV--YAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 430 ~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~--~~~~~~~~~~~~~~~~fl~~ 481 (494)
+ ++..+.+.+.+.. .++++++++.||. +...+..+.++.+|++||++
T Consensus 328 ~--~~~~~~l~~~lp~---~~~~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 328 D--PHDVDLLLSKLPN---LIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp C--HHHHHHHHTTCTT---EEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred C--HHHHHHHHHHCCC---CeEEEEeCCCCCcchhhccchHHHHHHHHHHHHhc
Confidence 8 8777666655532 3578899999996 23346677889999999974
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.82 E-value=2.8e-20 Score=168.67 Aligned_cols=192 Identities=13% Similarity=0.110 Sum_probs=123.8
Q ss_pred CCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 011049 254 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVE 333 (494)
Q Consensus 254 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~ 333 (494)
+.|+||++|||+|..+... ...+..+.......++++||.|+.++|+...... ....++|+.++++
T Consensus 30 ~~~~vv~iHGGg~~~~~~~------~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~--------~~~~~~d~~~~~~ 95 (263)
T d1vkha_ 30 TREAVIYIHGGAWNDPENT------PNDFNQLANTIKSMDTESTVCQYSIEYRLSPEIT--------NPRNLYDAVSNIT 95 (263)
T ss_dssp CCEEEEEECCSTTTCTTCC------GGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSC--------TTHHHHHHHHHHH
T ss_pred CCcEEEEECCCCccCCCCC------cchHHHHHHHHHHHHHhCCeEEEEeccccCcchh--------hhHHHHhhhhhhh
Confidence 4799999999987532211 1112111112233446789999998887543321 1345789999999
Q ss_pred HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC-----------------ceeEEEeCCCCCCCCCCC--C-Cccc---
Q 011049 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-----------------LFCCGIARSGSYNKTLTP--F-GFQT--- 390 (494)
Q Consensus 334 ~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~-----------------~~~a~v~~~~~~~~~~~~--~-~~~~--- 390 (494)
|+.++. +.++|+|+|+|+||++++.++...++ ..++.+...+..+..... . .+..
T Consensus 96 ~l~~~~--~~~~i~l~G~S~Gg~lal~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (263)
T d1vkha_ 96 RLVKEK--GLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEYDCFTR 173 (263)
T ss_dssp HHHHHH--TCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGGGHHHHH
T ss_pred cccccc--cccceeeeccCcHHHHHHHHHHhccCccccccccccccccccccccccccccccccchhhhhhccccchhhh
Confidence 999874 56899999999999999998876543 335555555543311000 0 0000
Q ss_pred ----ccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccC
Q 011049 391 ----EFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA 463 (494)
Q Consensus 391 ----~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 463 (494)
.....|..............+.++.+|+|++||++|++|| +.++.+++++|++.|++++++++++.+|...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp--~~~s~~l~~~L~~~g~~~~~~~~~~~~H~~~ 248 (263)
T d1vkha_ 174 LAFPDGIQMYEEEPSRVMPYVKKALSRFSIDMHLVHSYSDELLT--LRQTNCLISCLQDYQLSFKLYLDDLGLHNDV 248 (263)
T ss_dssp HHCTTCGGGCCCCHHHHHHHHHHHHHHHTCEEEEEEETTCSSCC--THHHHHHHHHHHHTTCCEEEEEECCCSGGGG
T ss_pred cccccccccccccccccCccccccccccCCCeeeeecCCCcccC--HHHHHHHHHHHHHCCCCEEEEEECCCCchhh
Confidence 0000011100000011122345567999999999999998 9999999999999999999999999999754
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.81 E-value=2.6e-19 Score=164.47 Aligned_cols=243 Identities=14% Similarity=0.058 Sum_probs=161.3
Q ss_pred cccEEEEEEcC-CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEE
Q 011049 222 LQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 300 (494)
Q Consensus 222 ~~~~~~~~~~~-dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 300 (494)
.+++.+++.+. .|.+++..++.|.+ ++|+|+++||++... ....|.... .....+.+.|+++
T Consensus 7 ~~v~~~~~~s~~~~r~~~~~v~~p~~-------~~Pvl~llhG~~~~~---------d~~~~~~~~-~~~~~~~~~~~~~ 69 (288)
T d1sfra_ 7 LPVEYLQVPSPSMGRDIKVQFQSGGA-------NSPALYLLDGLRAQD---------DFSGWDINT-PAFEWYDQSGLSV 69 (288)
T ss_dssp CCCEEEEEEETTTTEEEEEEEECCST-------TBCEEEEECCTTCCS---------SSCHHHHHC-CHHHHHTTSSCEE
T ss_pred CEEEEEEEECCCCCcEEEEEEeCCCC-------CceEEEEcCCCCCCC---------cchhhhhhc-cHHHHHHhCCCEE
Confidence 45677788764 67788888887643 499999999964211 001111111 1234566789999
Q ss_pred EeCCCCCCCCCCCCCC---------CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeE
Q 011049 301 LAGPSIPIIGEGDKLP---------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCC 371 (494)
Q Consensus 301 ~~~~~~~~~g~g~~~~---------~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a 371 (494)
++++......++.... ...+.... +.+.+.++.++..+|++|++|+|+|+||++|+.+++++|++|++
T Consensus 70 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~a 146 (288)
T d1sfra_ 70 VMPVGGQSSFYSDWYQPACGKAGCQTYKWETFL---TSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVY 146 (288)
T ss_dssp EEECCCTTCTTCBCSSCEEETTEEECCBHHHHH---HTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEE
T ss_pred EEeccCCCCCCccccCcccccccccchhHHHHH---HHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhccccccE
Confidence 9876644322222111 11222222 34567778888789999999999999999999999999999999
Q ss_pred EEeCCCCCCCCCCCCCccc----------cccccc--ccHHHHHhcCccccccCC---CCCEEEEecCCCCCCCCC----
Q 011049 372 GIARSGSYNKTLTPFGFQT----------EFRTLW--EATNVYIEMSPITHANKI---KKPILIIHGEVDDKVGLF---- 432 (494)
Q Consensus 372 ~v~~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~~~sp~~~~~~~---~~P~li~~G~~D~~v~~~---- 432 (494)
+++++|.++.......... .....+ .+...+...+|...+.+. ++++++.+|..|..++..
T Consensus 147 v~~~Sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~d~~~~~~~~~~ 226 (288)
T d1sfra_ 147 AGAMSGLLDPSQAMGPTLIGLAMGDAGGYKASDMWGPKEDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLP 226 (288)
T ss_dssp EEEESCCSCTTSTTHHHHHHHHHHHTTSCCHHHHHCSTTSTHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHH
T ss_pred EEEecCcccccccccchhhhhhhhhcccccHhhhcCCcchhhhHhcCHHHHHHHhhhcCCeEEEEeCCCCCCCccccccc
Confidence 9999998764322111000 000000 122345667777766543 478999999999876410
Q ss_pred --------HHHHHHHHHHHHhCCCcEEEEEcCCC-CCccCCcccHHHHHHHHHHHHHHhcCCCC
Q 011049 433 --------PMQAERFFDALKGHGALSRLVLLPFE-HHVYAARENVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 433 --------~~~~~~~~~~l~~~g~~~~~~~~~~~-~H~~~~~~~~~~~~~~~~~fl~~~l~~~~ 487 (494)
..+++++.++|++.|++.++.++++. +|.+. .+...+.+++.||.+.|+..+
T Consensus 227 ~~~~e~~~~~~~~~l~~~l~~~g~~~~~~~~~~~G~H~w~---~w~~~l~~~l~~l~~alg~~~ 287 (288)
T d1sfra_ 227 AKFLEGFVRTSNIKFQDAYNAGGGHNGVFDFPDSGTHSWE---YWGAQLNAMKPDLQRALGATP 287 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCSEEEECCSCCCSSHH---HHHHHHHHTHHHHHHHHTCCC
T ss_pred cchhHHHHHHHHHHHHHHHHHCCCCeEEEEECCCCccChh---HHHHHHHHHHHHHHHhcCCCC
Confidence 25678899999999999999999865 59763 344566778899999987653
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.81 E-value=1.1e-18 Score=152.03 Aligned_cols=126 Identities=18% Similarity=0.157 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHH
Q 011049 322 EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNV 401 (494)
Q Consensus 322 ~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (494)
...+.++.+.|+.+.++..+|++||+|+|+|+||++++.++.++|++|+++++++|.....
T Consensus 82 ~~~~~~l~~~l~~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~~~~------------------- 142 (209)
T d3b5ea1 82 LAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLD------------------- 142 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCS-------------------
T ss_pred HHHHHHHHHHHHHHHHHhCcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCccccc-------------------
Confidence 3446667777888888777899999999999999999999999999999999999854311
Q ss_pred HHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 402 YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 402 ~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
+.......++|++++||++|+.++ ..+.++.+.|++.|.++++.+|++ +|++.. ...+.+.+||.
T Consensus 143 -----~~~~~~~~~~p~~~~~G~~D~~~~---~~~~~~~~~l~~~G~~v~~~~~~g-gH~i~~-----~~~~~~~~wl~ 207 (209)
T d3b5ea1 143 -----HVPATDLAGIRTLIIAGAADETYG---PFVPALVTLLSRHGAEVDARIIPS-GHDIGD-----PDAAIVRQWLA 207 (209)
T ss_dssp -----SCCCCCCTTCEEEEEEETTCTTTG---GGHHHHHHHHHHTTCEEEEEEESC-CSCCCH-----HHHHHHHHHHH
T ss_pred -----cccccccccchheeeeccCCCccC---HHHHHHHHHHHHCCCCeEEEEECC-CCCCCH-----HHHHHHHHHhC
Confidence 011122346899999999999984 567889999999999999999998 798862 34556677773
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=4.3e-20 Score=160.61 Aligned_cols=191 Identities=14% Similarity=0.057 Sum_probs=127.3
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
.+|.++.+....|.. ....|.||++||.+.+. ..|... .....|+++||.|+++|.+ |+
T Consensus 13 v~G~~i~y~~~~~~~-----~~~~~~vvllHG~~~~~-----------~~w~~~--~~~~~la~~gy~via~D~~---G~ 71 (208)
T d1imja_ 13 VQGQALFFREALPGS-----GQARFSVLLLHGIRFSS-----------ETWQNL--GTLHRLAQAGYRAVAIDLP---GL 71 (208)
T ss_dssp ETTEEECEEEEECSS-----SCCSCEEEECCCTTCCH-----------HHHHHH--THHHHHHHTTCEEEEECCT---TS
T ss_pred ECCEEEEEEEecCCC-----CCCCCeEEEECCCCCCh-----------hHHhhh--HHHHHHHHcCCeEEEeecc---cc
Confidence 589999988888754 12267899999965221 112110 1235789999999997765 44
Q ss_pred CCCCCC---chh-HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCC
Q 011049 312 GDKLPN---DRF-VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG 387 (494)
Q Consensus 312 g~~~~~---~~~-~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~ 387 (494)
|.+... ..+ .....+++.+.++.+ +.+++.++|||+||.+++.++.++|++++++|+.+|......
T Consensus 72 G~S~~~~~~~~~~~~~~~~~l~~~~~~l------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~~~---- 141 (208)
T d1imja_ 72 GHSKEAAAPAPIGELAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKI---- 141 (208)
T ss_dssp GGGTTSCCSSCTTSCCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGGS----
T ss_pred cCCCCCCcccccchhhhhhhhhhccccc------ccccccccccCcHHHHHHHHHHHhhhhcceeeecCccccccc----
Confidence 444221 111 111123333333332 347889999999999999999999999999999988532100
Q ss_pred cccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCccc
Q 011049 388 FQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAREN 467 (494)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 467 (494)
......++++|+|+++|++|..+| .. . +.++ .-...++.++++++|... .++
T Consensus 142 -------------------~~~~~~~i~~P~Lii~G~~D~~~~--~~--~---~~~~-~~~~~~~~~i~~~gH~~~-~~~ 193 (208)
T d1imja_ 142 -------------------NAANYASVKTPALIVYGDQDPMGQ--TS--F---EHLK-QLPNHRVLIMKGAGHPCY-LDK 193 (208)
T ss_dssp -------------------CHHHHHTCCSCEEEEEETTCHHHH--HH--H---HHHT-TSSSEEEEEETTCCTTHH-HHC
T ss_pred -------------------ccccccccccccccccCCcCcCCc--HH--H---HHHH-hCCCCeEEEECCCCCchh-hhC
Confidence 011235678999999999999764 32 1 2232 335689999999999754 356
Q ss_pred HHHHHHHHHHHHHH
Q 011049 468 VMHVIWETDRWLQK 481 (494)
Q Consensus 468 ~~~~~~~~~~fl~~ 481 (494)
.+.+.+.+.+||++
T Consensus 194 p~~~~~~l~~Fl~~ 207 (208)
T d1imja_ 194 PEEWHTGLLDFLQG 207 (208)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 77888899999874
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=99.78 E-value=1.9e-17 Score=152.25 Aligned_cols=212 Identities=14% Similarity=0.064 Sum_probs=136.8
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
.+|.+|++..+-+++ .|.||++||.+.+. ..| .......|+++||.|+++|.+ |+
T Consensus 7 ~g~~~i~y~~~G~~~--------~p~vvl~HG~~~~~-----------~~~---~~~~~~~l~~~g~~vi~~D~~---G~ 61 (297)
T d1q0ra_ 7 SGDVELWSDDFGDPA--------DPALLLVMGGNLSA-----------LGW---PDEFARRLADGGLHVIRYDHR---DT 61 (297)
T ss_dssp ETTEEEEEEEESCTT--------SCEEEEECCTTCCG-----------GGS---CHHHHHHHHTTTCEEEEECCT---TS
T ss_pred ECCEEEEEEEecCCC--------CCEEEEECCCCcCh-----------hHH---HHHHHHHHHhCCCEEEEEeCC---CC
Confidence 567888887774432 58899999975221 112 223455778899999996665 55
Q ss_pred CCCCCC-----chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC---
Q 011049 312 GDKLPN-----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL--- 383 (494)
Q Consensus 312 g~~~~~-----~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~--- 383 (494)
|.+... .....+.++|+.+.++.+ +.+++.++|||+||.+++.+|..+|++++++|++++......
T Consensus 62 G~S~~~~~~~~~~~~~~~~~d~~~ll~~l------~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~ 135 (297)
T d1q0ra_ 62 GRSTTRDFAAHPYGFGELAADAVAVLDGW------GVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDA 135 (297)
T ss_dssp TTSCCCCTTTSCCCHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHH
T ss_pred cccccccccccccccchhhhhhccccccc------cccceeeccccccchhhhhhhcccccceeeeEEEccccccccchh
Confidence 554321 112456667776666553 346799999999999999999999999999998876533110
Q ss_pred ------------C--CCCccc------------------------------ccccccccHH-------HHH---------
Q 011049 384 ------------T--PFGFQT------------------------------EFRTLWEATN-------VYI--------- 403 (494)
Q Consensus 384 ------------~--~~~~~~------------------------------~~~~~~~~~~-------~~~--------- 403 (494)
. ...... ....++.... .+.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (297)
T d1q0ra_ 136 NIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEP 215 (297)
T ss_dssp HHHHHHHTCCCSSCSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCC
T ss_pred hhHHHhhhhhhhhhhhhhhHHHHHHHHHhccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccccchhh
Confidence 0 000000 0000000000 000
Q ss_pred ---------hcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHH
Q 011049 404 ---------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWE 474 (494)
Q Consensus 404 ---------~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~ 474 (494)
..+....+.++++|+|+++|++|..+| +..++.+.+.+ ...++++++++||.+. .+....+.+.
T Consensus 216 ~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~--~~~~~~~~~~~----p~~~~~~i~~~gH~~~-~e~p~~~~~~ 288 (297)
T d1q0ra_ 216 YAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAP--APHGKHLAGLI----PTARLAEIPGMGHALP-SSVHGPLAEV 288 (297)
T ss_dssp CGGGGCCCCCGGGGGGGGGCCSCEEEEEETTCSSSC--TTHHHHHHHTS----TTEEEEEETTCCSSCC-GGGHHHHHHH
T ss_pred hhhhhhhhccccchhhhhccCCceEEEEeCCCCCCC--HHHHHHHHHhC----CCCEEEEECCCCCcch-hhCHHHHHHH
Confidence 011223467789999999999999987 77776666554 3578999999999876 4667777777
Q ss_pred HHHHHHH
Q 011049 475 TDRWLQK 481 (494)
Q Consensus 475 ~~~fl~~ 481 (494)
+++||+.
T Consensus 289 i~~~l~~ 295 (297)
T d1q0ra_ 289 ILAHTRS 295 (297)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7777765
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.78 E-value=1.3e-18 Score=159.17 Aligned_cols=217 Identities=20% Similarity=0.184 Sum_probs=139.0
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 308 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 308 (494)
|...||.++.+..+-.++ . .|+||++||++..+ ..|. .....++++||.|+++|.+
T Consensus 6 ~~~~~g~~i~y~~~g~~~-----~--~~~iv~lHG~~g~~-----------~~~~----~~~~~~~~~~~~vi~~D~~-- 61 (290)
T d1mtza_ 6 YAKVNGIYIYYKLCKAPE-----E--KAKLMTMHGGPGMS-----------HDYL----LSLRDMTKEGITVLFYDQF-- 61 (290)
T ss_dssp EEEETTEEEEEEEECCSS-----C--SEEEEEECCTTTCC-----------SGGG----GGGGGGGGGTEEEEEECCT--
T ss_pred eEEECCEEEEEEEcCCCC-----C--CCeEEEECCCCCch-----------HHHH----HHHHHHHHCCCEEEEEeCC--
Confidence 444699999877775432 1 58899999975211 1121 2233567889999996655
Q ss_pred CCCCCCCCC--ch-hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC-
Q 011049 309 IGEGDKLPN--DR-FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT- 384 (494)
Q Consensus 309 ~g~g~~~~~--~~-~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~- 384 (494)
|+|.+... .. ..+..++|+.+.++.+. ..+++.++|||+||.+++.++.++|+++++++..+++......
T Consensus 62 -G~G~S~~~~~~~~~~~~~~~~l~~ll~~l~-----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 135 (290)
T d1mtza_ 62 -GCGRSEEPDQSKFTIDYGVEEAEALRSKLF-----GNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTV 135 (290)
T ss_dssp -TSTTSCCCCGGGCSHHHHHHHHHHHHHHHH-----TTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHH
T ss_pred -CCccccccccccccccchhhhhhhhhcccc-----cccccceecccccchhhhhhhhcChhhheeeeecccccCcccch
Confidence 56655432 11 24566777777666652 1268999999999999999999999999999988776431000
Q ss_pred ----------CC-------------Cccc-c-------------cccccccHHH------------H-------------
Q 011049 385 ----------PF-------------GFQT-E-------------FRTLWEATNV------------Y------------- 402 (494)
Q Consensus 385 ----------~~-------------~~~~-~-------------~~~~~~~~~~------------~------------- 402 (494)
.. .+.. . .......++. +
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (290)
T d1mtza_ 136 KEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITG 215 (290)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCS
T ss_pred hhhhhhhhhhhHHHHHHHHHhhhhccccchhHHHHHHHHhhhhhcccccchHHHHHHHHHHhhhhhhhhhcchhHHhHhh
Confidence 00 0000 0 0000000000 0
Q ss_pred --HhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 403 --IEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 403 --~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
...+......++++|+|+++|++|..+ +..+..+.+.+. ++++.+++++||.+. .++.+.+.+.+.+||.
T Consensus 216 ~~~~~~~~~~~~~i~~P~l~i~G~~D~~~---~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~e~p~~~~~~i~~FL~ 287 (290)
T d1mtza_ 216 TIKDWDITDKISAIKIPTLITVGEYDEVT---PNVARVIHEKIA----GSELHVFRDCSHLTM-WEDREGYNKLLSDFIL 287 (290)
T ss_dssp TTTTCBCTTTGGGCCSCEEEEEETTCSSC---HHHHHHHHHHST----TCEEEEETTCCSCHH-HHSHHHHHHHHHHHHH
T ss_pred hhhcccHHHHhhcccceEEEEEeCCCCCC---HHHHHHHHHHCC----CCEEEEECCCCCchH-HhCHHHHHHHHHHHHH
Confidence 011222345668899999999999875 455666665553 368999999999876 3667788899999999
Q ss_pred Hhc
Q 011049 481 KYC 483 (494)
Q Consensus 481 ~~l 483 (494)
+|+
T Consensus 288 ~h~ 290 (290)
T d1mtza_ 288 KHL 290 (290)
T ss_dssp TCC
T ss_pred HhC
Confidence 985
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.78 E-value=1.2e-17 Score=151.50 Aligned_cols=214 Identities=14% Similarity=0.139 Sum_probs=132.4
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 308 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 308 (494)
+++.||.++++..+ + . -|.||++||.+.+ ...| ......|+++||.|+++|.+
T Consensus 3 ~~t~dG~~l~y~~~---G-----~--g~~ivlvHG~~~~-----------~~~~----~~~~~~l~~~g~~vi~~D~~-- 55 (274)
T d1a8qa_ 3 CTTRDGVEIFYKDW---G-----Q--GRPVVFIHGWPLN-----------GDAW----QDQLKAVVDAGYRGIAHDRR-- 55 (274)
T ss_dssp EECTTSCEEEEEEE---C-----S--SSEEEEECCTTCC-----------GGGG----HHHHHHHHHTTCEEEEECCT--
T ss_pred EECcCCCEEEEEEE---C-----C--CCeEEEECCCCCC-----------HHHH----HHHHHHHHHCCCEEEEEeCC--
Confidence 57789998887654 1 1 3568889996521 1112 23445678899999996665
Q ss_pred CCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHH-hCCCceeEEEeCCCCCCCCCC-
Q 011049 309 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA-HAPHLFCCGIARSGSYNKTLT- 384 (494)
Q Consensus 309 ~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~p~~~~a~v~~~~~~~~~~~- 384 (494)
|+|.+... .......+.|+.+.++.+ ..+++.++|||+||.+++.+++ +.|+++++++.+++.......
T Consensus 56 -G~G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~ 128 (274)
T d1a8qa_ 56 -GHGHSTPVWDGYDFDTFADDLNDLLTDL------DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKS 128 (274)
T ss_dssp -TSTTSCCCSSCCSHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCC
T ss_pred -CCcccccccccccchhhHHHHHHHHHHh------hhhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhh
Confidence 45554322 223445566666665543 2368999999999998887655 568999998888764321110
Q ss_pred ---CCCcccc---------------------------c---cccc--------------------ccHHHHHhcCccccc
Q 011049 385 ---PFGFQTE---------------------------F---RTLW--------------------EATNVYIEMSPITHA 411 (494)
Q Consensus 385 ---~~~~~~~---------------------------~---~~~~--------------------~~~~~~~~~sp~~~~ 411 (494)
....... . .... .....+...+....+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (274)
T d1a8qa_ 129 DKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDL 208 (274)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHH
T ss_pred hhccchhhHHHHHHHHhhhhhhhHHHhhhhhhhhhhccccchhhhhhHHHHHHHhhhccchhhhhhHHHHhhccchHHHH
Confidence 0000000 0 0000 000111222333456
Q ss_pred cCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCC-cccHHHHHHHHHHHHHH
Q 011049 412 NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA-RENVMHVIWETDRWLQK 481 (494)
Q Consensus 412 ~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~-~~~~~~~~~~~~~fl~~ 481 (494)
.++++|+|+++|++|..+| .+...+..+.+ -.++++++++++||.... .+..+.+.+.+.+||++
T Consensus 209 ~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 209 KKFDIPTLVVHGDDDQVVP--IDATGRKSAQI---IPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp TTCCSCEEEEEETTCSSSC--GGGTHHHHHHH---STTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred HhccceeeeeccCCCCCcC--HHHHHHHHHHh---CCCCEEEEECCCCCcccccccCHHHHHHHHHHHHCc
Confidence 7899999999999999987 66543333333 234689999999998653 35566778889999864
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.77 E-value=3.8e-18 Score=147.89 Aligned_cols=110 Identities=22% Similarity=0.202 Sum_probs=92.3
Q ss_pred CCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEE
Q 011049 341 ADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILI 420 (494)
Q Consensus 341 ~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li 420 (494)
+|+++++++|+|+||.+++.++..+|+.+.++++.+|...... ........+|+++
T Consensus 93 ~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~i 148 (203)
T d2r8ba1 93 YQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP------------------------KISPAKPTRRVLI 148 (203)
T ss_dssp HTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC------------------------CCCCCCTTCEEEE
T ss_pred CCCceEEEEEecCHHHHHHHHHHhhhhcccceeeecccccccc------------------------ccccccccchhhc
Confidence 5789999999999999999999999999999999998643111 0111234589999
Q ss_pred EecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 421 IHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 421 ~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
+||++|++|| ++++++++++|++.|.++++++|++ +|++.. ..++.+.+||.+|
T Consensus 149 ~hG~~D~~vp--~~~~~~~~~~L~~~g~~v~~~~~~g-gH~~~~-----~~~~~~~~wl~~~ 202 (203)
T d2r8ba1 149 TAGERDPICP--VQLTKALEESLKAQGGTVETVWHPG-GHEIRS-----GEIDAVRGFLAAY 202 (203)
T ss_dssp EEETTCTTSC--HHHHHHHHHHHHHHSSEEEEEEESS-CSSCCH-----HHHHHHHHHHGGG
T ss_pred cccCCCCccc--HHHHHHHHHHHHHCCCCEEEEEECC-CCcCCH-----HHHHHHHHHHHhc
Confidence 9999999998 9999999999999999999999987 799752 4567789999876
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=99.77 E-value=1.6e-17 Score=150.64 Aligned_cols=215 Identities=17% Similarity=0.154 Sum_probs=138.7
Q ss_pred EEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC
Q 011049 228 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 307 (494)
Q Consensus 228 ~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~ 307 (494)
++++.||.+|++..+-|++ .|+||++||.+.+ ...| ......|+++||.|+++|.+
T Consensus 2 ~i~~~dG~~l~y~~~G~~~--------~~~vv~lHG~~~~-----------~~~~----~~~~~~l~~~g~~vi~~D~~- 57 (275)
T d1a88a_ 2 TVTTSDGTNIFYKDWGPRD--------GLPVVFHHGWPLS-----------ADDW----DNQMLFFLSHGYRVIAHDRR- 57 (275)
T ss_dssp EEECTTSCEEEEEEESCTT--------SCEEEEECCTTCC-----------GGGG----HHHHHHHHHTTCEEEEECCT-
T ss_pred EEEecCCCEEEEEEecCCC--------CCeEEEECCCCCC-----------HHHH----HHHHHHHHhCCCEEEEEecc-
Confidence 4678999999999997654 3678899997521 1122 23455788999999996665
Q ss_pred CCCCCCCCC--CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecCh-HHHHHHHHHHhCCCceeEEEeCCCCCCCCCC
Q 011049 308 IIGEGDKLP--NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSY-GAFMTAHLLAHAPHLFCCGIARSGSYNKTLT 384 (494)
Q Consensus 308 ~~g~g~~~~--~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~-GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~ 384 (494)
|+|.+.. .....+..++|+.+.++.+ +.+++.++|+|+ ||.++..++..+|++++.+|.+++.......
T Consensus 58 --G~G~s~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~ 129 (275)
T d1a88a_ 58 --GHGRSDQPSTGHDMDTYAADVAALTEAL------DLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVK 129 (275)
T ss_dssp --TSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBC
T ss_pred --cccccccccccccccccccccccccccc------cccccccccccccccchhhcccccCcchhhhhhhhccccccccc
Confidence 4555432 2223456677877777765 235678888886 6667777888999999999988764321100
Q ss_pred CC----Ccc-------------------------------cccccc--------c------------ccHHHHHhcCccc
Q 011049 385 PF----GFQ-------------------------------TEFRTL--------W------------EATNVYIEMSPIT 409 (494)
Q Consensus 385 ~~----~~~-------------------------------~~~~~~--------~------------~~~~~~~~~sp~~ 409 (494)
.. ... ...... + .....+...+...
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (275)
T d1a88a_ 130 SDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTD 209 (275)
T ss_dssp BTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHH
T ss_pred chhhhhhhhhhhhhhhhhhhhhhhHHHHHhhhhhhhhhcccchhhHHHHHHHHHHHhhcccchHHHHHHHHHhhhhhhhH
Confidence 00 000 000000 0 0000111222333
Q ss_pred cccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 410 HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 410 ~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
.+.++++|+|+++|++|..+| ..+..+....+ ..++++++++++||.+.. ++.+.+.+.+.+||+
T Consensus 210 ~l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~Fl~ 274 (275)
T d1a88a_ 210 DLKRIDVPVLVAHGTDDQVVP--YADAAPKSAEL---LANATLKSYEGLPHGMLS-THPEVLNPDLLAFVK 274 (275)
T ss_dssp HHHHCCSCEEEEEETTCSSSC--STTTHHHHHHH---STTEEEEEETTCCTTHHH-HCHHHHHHHHHHHHH
T ss_pred HHHhhccccceeecCCCCCcC--HHHHHHHHHHh---CCCCEEEEECCCCCchHH-hCHHHHHHHHHHHHc
Confidence 466789999999999999987 65544433333 235799999999998763 567788899999986
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.77 E-value=6.1e-18 Score=153.99 Aligned_cols=245 Identities=16% Similarity=0.180 Sum_probs=151.3
Q ss_pred ccEEEEEEcC-CCceEEEEEEeCCCCCCC---CCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCe
Q 011049 223 QKEMIKYQRK-DGVPLTATLYLPPGYDQS---KDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF 298 (494)
Q Consensus 223 ~~~~~~~~~~-dg~~~~~~l~~P~~~~~~---~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~ 298 (494)
+.+.+++.|. -|.++...+|+|+++... ++.++|+|+++||.+ ++...|.... .......+.|+
T Consensus 13 ~~~~~s~~S~~l~~~~~~~VyLP~~y~~~~~~~~~~yPVLYlLhG~~-----------~~~~~w~~~~-~~~~~~~~~~~ 80 (299)
T d1pv1a_ 13 RLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLT-----------CTPDNASEKA-FWQFQADKYGF 80 (299)
T ss_dssp EEEEEEEECSSSSSEEEEEEEECTTTTSCCCSSCTTBCEEEEECCTT-----------CCHHHHHHHS-CHHHHHHHHTC
T ss_pred EEEEEEEECcccCCceEEEEEeCCcccccCcccCCCCCEEEEcCCCC-----------CCHHHHHHhh-hHHHHHHHcCC
Confidence 4667778765 578999999999998532 334699999999964 2222232111 12234456899
Q ss_pred EEEeCCCCCC-------------CCCCCCCC----------CchhHHHHHHHHHHHHHHHHHc----CCCCCCcEEEEec
Q 011049 299 AVLAGPSIPI-------------IGEGDKLP----------NDRFVEQLVSSAEAAVEEVVRR----GVADPSRIAVGGH 351 (494)
Q Consensus 299 ~v~~~~~~~~-------------~g~g~~~~----------~~~~~~~~~~d~~~~v~~l~~~----~~~d~~ri~i~G~ 351 (494)
+|+++...+. .|....+. ...+.....+++...|+..... ...++++.+|+|+
T Consensus 81 ~vv~~~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~ 160 (299)
T d1pv1a_ 81 AIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGH 160 (299)
T ss_dssp EEEECCSSCCSTTSCCCTTCCSSSSSSCCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEE
T ss_pred ceecCCCcccccccCCcccccccccCCCccccccccCCcccccchHHHHHHHHHHHHHHhCCcccccccccccceEEEee
Confidence 9988432111 01111111 1233344556666665544321 1123468999999
Q ss_pred ChHHHHHHHHHHh--CCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCC----CCCEEEEecCC
Q 011049 352 SYGAFMTAHLLAH--APHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKI----KKPILIIHGEV 425 (494)
Q Consensus 352 S~GG~~a~~~~~~--~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~----~~P~li~~G~~ 425 (494)
||||+.|+.++.+ +|++|.++++.+|+.+.....+..........+..+.+...+|...+.+. ..++++.+|++
T Consensus 161 SmGG~gAl~~al~~~~p~~f~~~~s~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~G~~ 240 (299)
T d1pv1a_ 161 SMGGYGAICGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGEEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDS 240 (299)
T ss_dssp THHHHHHHHHHHHTGGGTCCSEEEEESCCCCSTTSHHHHHHHHHHSCC----CGGGCHHHHGGGSCCCTTCCEEEECCTT
T ss_pred cccHHHHHHHHHHhcCCCceEEEeeccCcCCcccccchhhhhhhhcccchhhhhhcCHHHHHHHhhccCCcceeEecCCC
Confidence 9999999999986 48999999999998765432221111111111122333444554443332 25789999999
Q ss_pred CCCCCCCHH-HHHHHHHHHHhCCCc--EEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 426 DDKVGLFPM-QAERFFDALKGHGAL--SRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 426 D~~v~~~~~-~~~~~~~~l~~~g~~--~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
|...+ .. ..+.+.+++++++.+ +++...||.+|.+. -+...+...+.|+.++|+
T Consensus 241 D~~~~--~~~~~~~f~~~~~~~g~~~~~~~~~~~G~~Hsw~---yW~~~i~~~l~f~a~~lg 297 (299)
T d1pv1a_ 241 DPFLE--EHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYY---FVSTFVPEHAEFHARNLG 297 (299)
T ss_dssp CTTTT--TTCCTHHHHHHHTTSTTTTSEEEECCTTCCSSHH---HHHHHHHHHHHHHHHHTT
T ss_pred Ccchh--hhhcHHHHHHHHHhcCCCcceEEEecCCCCcCHH---HHHHHHHHHHHHHHHhcC
Confidence 99864 22 357799999988865 67878888889863 244667777899999875
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.75 E-value=7.4e-18 Score=149.09 Aligned_cols=201 Identities=13% Similarity=0.134 Sum_probs=127.6
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCC--CchhHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP--NDRFVEQLVSSAEAAV 332 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~--~~~~~~~~~~d~~~~v 332 (494)
.+.||++||.+ ++...| ...+..|+++||.|+++|.+ |+|.+.. ..........++..++
T Consensus 11 ~~~vvliHG~~-----------~~~~~~----~~l~~~L~~~G~~v~~~D~~---G~G~s~~~~~~~~~~~~~~~~~~~~ 72 (242)
T d1tqha_ 11 ERAVLLLHGFT-----------GNSADV----RMLGRFLESKGYTCHAPIYK---GHGVPPEELVHTGPDDWWQDVMNGY 72 (242)
T ss_dssp SCEEEEECCTT-----------CCTHHH----HHHHHHHHHTTCEEEECCCT---TSSSCHHHHTTCCHHHHHHHHHHHH
T ss_pred CCeEEEECCCC-----------CCHHHH----HHHHHHHHHCCCEEEEEeCC---CCccccccccccchhHHHHHHHHHH
Confidence 46788899964 222222 23566889999999996654 5665422 1122334455666666
Q ss_pred HHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCC--Cc-------cccccccc-------
Q 011049 333 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF--GF-------QTEFRTLW------- 396 (494)
Q Consensus 333 ~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~--~~-------~~~~~~~~------- 396 (494)
..+...+ .++++++|||+||.+++.++.++|......++ .+......... .. ........
T Consensus 73 ~~~~~~~---~~~~~l~G~S~Gg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (242)
T d1tqha_ 73 EFLKNKG---YEKIAVAGLSLGGVFSLKLGYTVPIEGIVTMC-APMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEM 148 (242)
T ss_dssp HHHHHHT---CCCEEEEEETHHHHHHHHHHTTSCCSCEEEES-CCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred hhhhhcc---cCceEEEEcchHHHHhhhhcccCccccccccc-ccccccchhHHHHHHHHHHHHHhhhccchhhhHHHHH
Confidence 6665554 37899999999999999999999876544433 22221100000 00 00000000
Q ss_pred --------cc--HHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcc
Q 011049 397 --------EA--TNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE 466 (494)
Q Consensus 397 --------~~--~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~ 466 (494)
.. ............+..+++|+|+++|++|..+| +..++++++.++ +..+++++++++||.+...+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lii~g~~D~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~ 224 (242)
T d1tqha_ 149 EKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQARHDEMIN--PDSANIIYNEIE--SPVKQIKWYEQSGHVITLDQ 224 (242)
T ss_dssp HHHTTSCCTTHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSC--TTHHHHHHHHCC--CSSEEEEEETTCCSSGGGST
T ss_pred hhhhhhccchhhcccccccccccccceeccccceeecccCCccC--HHHHHHHHHHcC--CCCcEEEEECCCCCcCcccc
Confidence 00 00001112334567789999999999999998 888888888764 34579999999999877555
Q ss_pred cHHHHHHHHHHHHHH
Q 011049 467 NVMHVIWETDRWLQK 481 (494)
Q Consensus 467 ~~~~~~~~~~~fl~~ 481 (494)
..+.+.+.+.+||++
T Consensus 225 ~~~~~~~~i~~Fl~~ 239 (242)
T d1tqha_ 225 EKDQLHEDIYAFLES 239 (242)
T ss_dssp THHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh
Confidence 677889999999986
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.75 E-value=7.2e-17 Score=141.29 Aligned_cols=125 Identities=25% Similarity=0.234 Sum_probs=94.7
Q ss_pred HHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHH-hCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCcc
Q 011049 330 AAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA-HAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPI 408 (494)
Q Consensus 330 ~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 408 (494)
..++...+ ..+|++||+++|+|+||.+++.++. +.+..+++++++++......... .
T Consensus 93 ~li~~~~~-~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~~~~----~----------------- 150 (218)
T d1auoa_ 93 DLIEAQKR-TGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGDEL----E----------------- 150 (218)
T ss_dssp HHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCCTTC----C-----------------
T ss_pred HHHHHHHH-hCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCccccccc----c-----------------
Confidence 33443333 3479999999999999999998865 45678999999888532111000 0
Q ss_pred ccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 409 THANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 409 ~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
......++|+|++||++|.+|| .++++++++.|++.|.++++..|+ .+|.+.. +.+..+.+||.+.|+
T Consensus 151 ~~~~~~~~pvl~~hG~~D~vvp--~~~~~~~~~~L~~~g~~~~~~~~~-~gH~i~~-----~~~~~i~~wl~~~lg 218 (218)
T d1auoa_ 151 LSASQQRIPALCLHGQYDDVVQ--NAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLP-----QEIHDIGAWLAARLG 218 (218)
T ss_dssp CCHHHHTCCEEEEEETTCSSSC--HHHHHHHHHHHHTTTCCEEEEEES-CSSSCCH-----HHHHHHHHHHHHHHC
T ss_pred cchhccCCCEEEEecCCCCccC--HHHHHHHHHHHHHCCCCEEEEEEC-CCCccCH-----HHHHHHHHHHHHhcC
Confidence 0011225899999999999998 999999999999999999999997 5898752 457789999998874
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=99.75 E-value=2.8e-17 Score=150.01 Aligned_cols=199 Identities=12% Similarity=0.057 Sum_probs=128.0
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCC---CchhHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP---NDRFVEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~---~~~~~~~~~~d~~~~ 331 (494)
-|+||++||.+.+. ..|..+.. ....++++||.|+++|.+ |+|.+.. ........++|+.+.
T Consensus 30 G~~ivllHG~~~~~-----------~~~~~~~~-~l~~~~~~g~~v~~~D~~---G~G~S~~~~~~~~~~~~~~~~i~~l 94 (283)
T d2rhwa1 30 GETVIMLHGGGPGA-----------GGWSNYYR-NVGPFVDAGYRVILKDSP---GFNKSDAVVMDEQRGLVNARAVKGL 94 (283)
T ss_dssp SSEEEEECCCSTTC-----------CHHHHHTT-THHHHHHTTCEEEEECCT---TSTTSCCCCCSSCHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCh-----------hHHHHHHH-HHHHHHHCCCEEEEEeCC---CCcccccccccccccchhhhhcccc
Confidence 37788999965221 22222111 223567899999996665 5555432 222233445666666
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC--CCCCccc---------c---------
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL--TPFGFQT---------E--------- 391 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~--~~~~~~~---------~--------- 391 (494)
++.+ + .+++.++|||+||.+++.++.++|++++++|+++|..-... ....... .
T Consensus 95 i~~l---~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (283)
T d2rhwa1 95 MDAL---D---IDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQM 168 (283)
T ss_dssp HHHH---T---CCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHH
T ss_pred cccc---c---ccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhhhhhHHHHHHHHHHhhhhhhhhHHHH
Confidence 5554 2 36899999999999999999999999999999876532111 0000000 0
Q ss_pred ------ccc---------cc----ccHHH------------HHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHH
Q 011049 392 ------FRT---------LW----EATNV------------YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFF 440 (494)
Q Consensus 392 ------~~~---------~~----~~~~~------------~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~ 440 (494)
... .+ ..+.. ....+....+.++++|+|+++|++|..+| +..++++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~~~ 246 (283)
T d2rhwa1 169 LQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVP--LDHGLKLL 246 (283)
T ss_dssp HHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSC--THHHHHHH
T ss_pred HHHhhcccccCcHHHHHHHHHHhhhhhhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEEEeCCCCCcC--HHHHHHHH
Confidence 000 00 00000 01123344567789999999999999988 88888777
Q ss_pred HHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 441 DALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 441 ~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
+.+. .+++++++++||.+. .++.+.+.+.+.+||++
T Consensus 247 ~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 247 WNID----DARLHVFSKCGHWAQ-WEHADEFNRLVIDFLRH 282 (283)
T ss_dssp HHSS----SEEEEEESSCCSCHH-HHTHHHHHHHHHHHHHH
T ss_pred HhCC----CCEEEEECCCCCchH-HhCHHHHHHHHHHHHhC
Confidence 7663 478999999999765 36677888889999975
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.75 E-value=4.1e-17 Score=147.77 Aligned_cols=213 Identities=11% Similarity=0.037 Sum_probs=131.7
Q ss_pred EcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCC
Q 011049 230 QRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPII 309 (494)
Q Consensus 230 ~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~ 309 (494)
...+|.++++..+ + + -|.||++||.+... ..+..+. ... ...++||.|+++|.+
T Consensus 8 i~~~G~~~~Y~~~---G-----~--G~pvvllHG~~~~~-----------~~~~~~~-~~~-~~l~~~~~vi~~Dl~--- 61 (271)
T d1uk8a_ 8 ILAAGVLTNYHDV---G-----E--GQPVILIHGSGPGV-----------SAYANWR-LTI-PALSKFYRVIAPDMV--- 61 (271)
T ss_dssp EEETTEEEEEEEE---C-----C--SSEEEEECCCSTTC-----------CHHHHHT-TTH-HHHTTTSEEEEECCT---
T ss_pred EEECCEEEEEEEE---e-----e--CCeEEEECCCCCCc-----------cHHHHHH-HHH-HHHhCCCEEEEEeCC---
Confidence 3468988886654 1 1 35678899965221 1121111 122 224579999996554
Q ss_pred CCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCC
Q 011049 310 GEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF 386 (494)
Q Consensus 310 g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~ 386 (494)
|+|.+... ....+....++.. +.+. .+.+++.++|||+||.+++.++.++|++++++|+..+.........
T Consensus 62 G~G~S~~~~~~~~~~~~~~~~~~~----~~~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~ 135 (271)
T d1uk8a_ 62 GFGFTDRPENYNYSKDSWVDHIIG----IMDA--LEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTE 135 (271)
T ss_dssp TSTTSCCCTTCCCCHHHHHHHHHH----HHHH--TTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCH
T ss_pred CCCCccccccccccccccchhhhh----hhhh--hcCCCceEeeccccceeehHHHHhhhccchheeecccCCCcccchh
Confidence 56655322 2223344444433 3333 2346899999999999999999999999999998776543211100
Q ss_pred Cc------cc---------------cccccc-------------ccHHHHH-------------hcCccccccCCCCCEE
Q 011049 387 GF------QT---------------EFRTLW-------------EATNVYI-------------EMSPITHANKIKKPIL 419 (494)
Q Consensus 387 ~~------~~---------------~~~~~~-------------~~~~~~~-------------~~sp~~~~~~~~~P~l 419 (494)
.. .. ...... ...+.+. .......+.++++|+|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 215 (271)
T d1uk8a_ 136 GLNAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETL 215 (271)
T ss_dssp HHHHHHTCCSCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHTSTTHHHHHHTTSCSSTHHHHHHHCCCHHHHTTCCSCEE
T ss_pred hhhhhhhccchhHHHHHHHHHHhhhcccchhHHHHHHHhhhhchhHHHHHHhhcchhhhhhhhhccccHHHHHhhcccee
Confidence 00 00 000000 0000111 1122334678899999
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 420 IIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 420 i~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
+++|++|..+| +..+..+.+.+. .+++++++++||.+. .+..+.+.+.+.+||++
T Consensus 216 ii~G~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~e~p~~~~~~i~~Fl~e 270 (271)
T d1uk8a_ 216 IIHGREDQVVP--LSSSLRLGELID----RAQLHVFGRCGHWTQ-IEQTDRFNRLVVEFFNE 270 (271)
T ss_dssp EEEETTCSSSC--HHHHHHHHHHCT----TEEEEEESSCCSCHH-HHTHHHHHHHHHHHHHT
T ss_pred EEecCCCCCcC--HHHHHHHHHhCC----CCEEEEECCCCCchH-HHCHHHHHHHHHHHHhc
Confidence 99999999988 887777766653 478999999999865 46777888899999985
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=99.74 E-value=4.8e-17 Score=146.99 Aligned_cols=215 Identities=15% Similarity=0.118 Sum_probs=133.0
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 308 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 308 (494)
|.+.||.++++... + + -|.||++||.+.. ...+..+. ... .+.++||.|+++|.+
T Consensus 6 ~~~~dg~~l~y~~~---G-----~--g~~vvllHG~~~~-----------~~~~~~~~-~~~-~~l~~~~~v~~~D~~-- 60 (268)
T d1j1ia_ 6 FVNAGGVETRYLEA---G-----K--GQPVILIHGGGAG-----------AESEGNWR-NVI-PILARHYRVIAMDML-- 60 (268)
T ss_dssp EEEETTEEEEEEEE---C-----C--SSEEEEECCCSTT-----------CCHHHHHT-TTH-HHHTTTSEEEEECCT--
T ss_pred EEEECCEEEEEEEE---c-----C--CCeEEEECCCCCC-----------ccHHHHHH-HHH-HHHhcCCEEEEEccc--
Confidence 34469988876532 2 2 2568889997521 11111111 122 334679999996654
Q ss_pred CCCCCCCC--CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC-
Q 011049 309 IGEGDKLP--NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP- 385 (494)
Q Consensus 309 ~g~g~~~~--~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~- 385 (494)
|+|.+.. .....+....|+.+.++.+ + + ..++.++|||+||.+++.++.++|++++++|++++........
T Consensus 61 -G~G~S~~~~~~~~~~~~~~~~~~~i~~l---~-~-~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~ 134 (268)
T d1j1ia_ 61 -GFGKTAKPDIEYTQDRRIRHLHDFIKAM---N-F-DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHE 134 (268)
T ss_dssp -TSTTSCCCSSCCCHHHHHHHHHHHHHHS---C-C-SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC---
T ss_pred -ccccccCCccccccccccccchhhHHHh---h-h-cccceeeeccccccccchhhccChHhhheeeecCCCccccccch
Confidence 4555432 2233455566665555443 2 2 2578999999999999999999999999999887643211000
Q ss_pred -------CCccccc---------c---cccc--------------cH-------HHHHh----cCccccccCCCCCEEEE
Q 011049 386 -------FGFQTEF---------R---TLWE--------------AT-------NVYIE----MSPITHANKIKKPILII 421 (494)
Q Consensus 386 -------~~~~~~~---------~---~~~~--------------~~-------~~~~~----~sp~~~~~~~~~P~li~ 421 (494)
..+.... . .... .. ..+.. ......+.++++|+|++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i 214 (268)
T d1j1ia_ 135 DLRPIINYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVV 214 (268)
T ss_dssp -------CCSCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEE
T ss_pred hhhhhhhhhhhhhhhHHHHHHHhhhhhhhhhhhhHHHHHhhhhhhhhhhhhhhhhhhhccccccchhhhHhhCCCCEEEE
Confidence 0000000 0 0000 00 00000 11223467789999999
Q ss_pred ecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 422 HGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 422 ~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
+|++|..+| +..+..+.+.+. ++++++++++||.+. .++...+.+.+.+||.+
T Consensus 215 ~G~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~e~p~~~~~~i~~FL~~ 267 (268)
T d1j1ia_ 215 QGKDDKVVP--VETAYKFLDLID----DSWGYIIPHCGHWAM-IEHPEDFANATLSFLSL 267 (268)
T ss_dssp EETTCSSSC--HHHHHHHHHHCT----TEEEEEESSCCSCHH-HHSHHHHHHHHHHHHHH
T ss_pred EeCCCCCCC--HHHHHHHHHhCC----CCEEEEECCCCCchH-HhCHHHHHHHHHHHHcC
Confidence 999999988 887777766653 479999999999876 46677888999999975
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=99.74 E-value=4.4e-17 Score=148.55 Aligned_cols=217 Identities=17% Similarity=0.100 Sum_probs=132.6
Q ss_pred EEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCC
Q 011049 226 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPS 305 (494)
Q Consensus 226 ~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~ 305 (494)
+.+++ .++.++++...-+++ .|+||++||.+... ..+..+ ......| ++||.|+++|.
T Consensus 6 ~~~~~-~~~~~~h~~~~G~~~--------~p~ivllHG~~~~~-----------~~~~~~-~~~~~~L-~~~~~vi~~D~ 63 (281)
T d1c4xa_ 6 EKRFP-SGTLASHALVAGDPQ--------SPAVVLLHGAGPGA-----------HAASNW-RPIIPDL-AENFFVVAPDL 63 (281)
T ss_dssp EEEEC-CTTSCEEEEEESCTT--------SCEEEEECCCSTTC-----------CHHHHH-GGGHHHH-HTTSEEEEECC
T ss_pred EEEEc-cCCEEEEEEEEecCC--------CCEEEEECCCCCCC-----------cHHHHH-HHHHHHH-hCCCEEEEEeC
Confidence 33444 355788877765443 58999999964211 111111 1123334 56999999665
Q ss_pred CCCCCCCCCCCC---c----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC
Q 011049 306 IPIIGEGDKLPN---D----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 306 ~~~~g~g~~~~~---~----~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 378 (494)
+ |+|.+... . ......++|+.+.++.+ + .+++.++|||+||.+++.++.++|++++++|++++.
T Consensus 64 ~---G~G~S~~~~~~~~~~~~~~~~~~~~i~~~i~~~---~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 134 (281)
T d1c4xa_ 64 I---GFGQSEYPETYPGHIMSWVGMRVEQILGLMNHF---G---IEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSV 134 (281)
T ss_dssp T---TSTTSCCCSSCCSSHHHHHHHHHHHHHHHHHHH---T---CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred C---CCccccccccccccchhhHHHhhhhcccccccc---c---cccceeccccccccccccccccccccccceEEeccc
Confidence 4 56655322 1 11233344444444333 3 367999999999999999999999999999988875
Q ss_pred CCCCCCCC-------------------------Cccccc-cccc----------ccH------H-HHH--------hcCc
Q 011049 379 YNKTLTPF-------------------------GFQTEF-RTLW----------EAT------N-VYI--------EMSP 407 (494)
Q Consensus 379 ~~~~~~~~-------------------------~~~~~~-~~~~----------~~~------~-~~~--------~~sp 407 (494)
........ .+.... .... ... . .+. ...+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (281)
T d1c4xa_ 135 GAPMNARPPELARLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIP 214 (281)
T ss_dssp SSCCSSCCHHHHHHHTGGGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCC
T ss_pred cCccccchhHHHHHHHhhhhcccchhhhhhhhhcccccccchhhhHHHHHhhhcccchhhhhhhhhhhHHhhhhhhhccc
Confidence 32110000 000000 0000 000 0 000 0122
Q ss_pred cccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 408 ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 408 ~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
...+.++++|+|+++|++|..+| +..++.+.+.+. ++++++++++||... .+..+.+.+.+.+||+
T Consensus 215 ~~~l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~Fl~ 280 (281)
T d1c4xa_ 215 PATLGRLPHDVLVFHGRQDRIVP--LDTSLYLTKHLK----HAELVVLDRCGHWAQ-LERWDAMGPMLMEHFR 280 (281)
T ss_dssp HHHHTTCCSCEEEEEETTCSSSC--THHHHHHHHHCS----SEEEEEESSCCSCHH-HHSHHHHHHHHHHHHH
T ss_pred hhhhhhhccceEEEEeCCCCCcC--HHHHHHHHHHCC----CCEEEEECCCCCchH-HhCHHHHHHHHHHHhC
Confidence 23467789999999999999988 787777766553 478999999999876 3667788888999986
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.74 E-value=7.4e-17 Score=145.70 Aligned_cols=214 Identities=14% Similarity=0.127 Sum_probs=135.0
Q ss_pred EEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC
Q 011049 228 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 307 (494)
Q Consensus 228 ~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~ 307 (494)
+|.+.||.+|++..+ + + -|.||++||.+.+ ...| ......|+++||.|+++|.+
T Consensus 2 ~f~~~dG~~l~y~~~---G-----~--g~~vv~lHG~~~~-----------~~~~----~~~~~~l~~~g~~vi~~D~~- 55 (271)
T d1va4a_ 2 TFVAKDGTQIYFKDW---G-----S--GKPVLFSHGWLLD-----------ADMW----EYQMEYLSSRGYRTIAFDRR- 55 (271)
T ss_dssp EEECTTSCEEEEEEE---S-----S--SSEEEEECCTTCC-----------GGGG----HHHHHHHHTTTCEEEEECCT-
T ss_pred EEEeECCeEEEEEEE---c-----C--CCeEEEECCCCCC-----------HHHH----HHHHHHHHhCCCEEEEEecc-
Confidence 577889999986554 1 1 3567889997521 1112 23455778899999996654
Q ss_pred CCCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHH-HHHHHhCCCceeEEEeCCCCCCCCCC
Q 011049 308 IIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMT-AHLLAHAPHLFCCGIARSGSYNKTLT 384 (494)
Q Consensus 308 ~~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a-~~~~~~~p~~~~a~v~~~~~~~~~~~ 384 (494)
|+|.+... ....+...+|+.+.++.+ +.+++.++|||+||.++ ..++.++|++++.++...+.......
T Consensus 56 --G~G~S~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~ 127 (271)
T d1va4a_ 56 --GFGRSDQPWTGNDYDTFADDIAQLIEHL------DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQ 127 (271)
T ss_dssp --TSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBC
T ss_pred --ccccccccccccccccccccceeeeeec------CCCcceeeccccccccccccccccccceeeEEEeeccccccccc
Confidence 45555322 223455566666555544 34678999999888655 55677889999999988765432111
Q ss_pred CCCccc------------cc-------------------c--cccc-------------c-------HHHHHhcCccccc
Q 011049 385 PFGFQT------------EF-------------------R--TLWE-------------A-------TNVYIEMSPITHA 411 (494)
Q Consensus 385 ~~~~~~------------~~-------------------~--~~~~-------------~-------~~~~~~~sp~~~~ 411 (494)
...... .. . .... . ...+...+....+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 207 (271)
T d1va4a_ 128 KPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDM 207 (271)
T ss_dssp BTTBTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHH
T ss_pred chhhhhhhhhhHHHHHHHHhhhhhhhhhhhhcchhhcccchhhhhhhHHHHHHhhhhhhhhhhhhhcccccchhhhhhhh
Confidence 000000 00 0 0000 0 0111222333456
Q ss_pred cCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 412 NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 412 ~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
.++++|+|+++|++|..+| +..+.++.+.+. ..+++++++++||... .++.+.+.+.+.+||++
T Consensus 208 ~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fL~k 271 (271)
T d1va4a_ 208 AKIDVPTLVIHGDGDQIVP--FETTGKVAAELI---KGAELKVYKDAPHGFA-VTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp HHCCSCEEEEEETTCSSSC--GGGTHHHHHHHS---TTCEEEEETTCCTTHH-HHTHHHHHHHHHHHHTC
T ss_pred hhcccceeecccCCCCCCC--HHHHHHHHHHhC---CCCEEEEECCCCCchH-HhCHHHHHHHHHHHHCc
Confidence 6789999999999999987 777777766553 2368899999999865 35677888889999864
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=2.8e-17 Score=152.88 Aligned_cols=218 Identities=14% Similarity=0.059 Sum_probs=137.8
Q ss_pred EEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCC
Q 011049 226 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPS 305 (494)
Q Consensus 226 ~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~ 305 (494)
.-.++..||.+|++... + + -|+||++||.+.+ ...|. .....|+++||.|+++|.
T Consensus 13 ~~~v~~~~g~~i~y~~~---G-----~--gp~vlllHG~~~~-----------~~~~~----~~~~~L~~~g~~vi~~D~ 67 (322)
T d1zd3a2 13 HGYVTVKPRVRLHFVEL---G-----S--GPAVCLCHGFPES-----------WYSWR----YQIPALAQAGYRVLAMDM 67 (322)
T ss_dssp EEEEEEETTEEEEEEEE---C-----C--SSEEEEECCTTCC-----------GGGGT----THHHHHHHTTCEEEEEEC
T ss_pred eeEEEECCCCEEEEEEE---c-----C--CCeEEEECCCCCC-----------HHHHH----HHHHHHHHCCCEEEEecc
Confidence 33445679988887654 2 1 3789999996532 12232 345678899999999665
Q ss_pred CCCCCCCCCCCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCC
Q 011049 306 IPIIGEGDKLPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 381 (494)
Q Consensus 306 ~~~~g~g~~~~~~----~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~ 381 (494)
+ |+|.+.... ...+....|+.+.++.+ +.+++.++|||+||.+++.+|.++|++++++|.+++....
T Consensus 68 ~---G~G~S~~~~~~~~~~~~~~~~~i~~l~~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 138 (322)
T d1zd3a2 68 K---GYGESSAPPEIEEYCMEVLCKEMVTFLDKL------GLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIP 138 (322)
T ss_dssp T---TSTTSCCCSCGGGGSHHHHHHHHHHHHHHH------TCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCC
T ss_pred c---cccccccccccccccccccchhhhhhhhcc------cccccccccccchHHHHHHHHHhCCccccceEEEcccccc
Confidence 4 566553321 12344455555555543 3468999999999999999999999999999987643211
Q ss_pred CCCCC---------------------Cc--------------------cc--------------------c-cccccccH
Q 011049 382 TLTPF---------------------GF--------------------QT--------------------E-FRTLWEAT 399 (494)
Q Consensus 382 ~~~~~---------------------~~--------------------~~--------------------~-~~~~~~~~ 399 (494)
..... .. .. . ....+...
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (322)
T d1zd3a2 139 ANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTE 218 (322)
T ss_dssp CCSSSCHHHHHHTCGGGHHHHHTTSTTHHHHHHHHTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCH
T ss_pred cccccchhhhhhccchhhhHHhhhccchhhhhhhhhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccH
Confidence 00000 00 00 0 00000000
Q ss_pred ---H----H------------------HHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEE
Q 011049 400 ---N----V------------------YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVL 454 (494)
Q Consensus 400 ---~----~------------------~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~ 454 (494)
. . ....++.....++++|+|+++|++|..++ +...+.+.+ .-...++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~----~~~~~~~~~ 292 (322)
T d1zd3a2 219 EEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLV--PQMSQHMED----WIPHLKRGH 292 (322)
T ss_dssp HHHHHHHHHHHHHTTHHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSC--GGGGTTGGG----TCTTCEEEE
T ss_pred HHHHHHHHHHhhcccccccccccccccccccchhhhcccCCCCEEEEEeCCCCCCC--HHHHHHHHH----hCCCCEEEE
Confidence 0 0 00112223346788999999999999987 666544433 334578899
Q ss_pred cCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 455 LPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 455 ~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
++++||... .+..+.+.+.+.+||+.+-+
T Consensus 293 i~~~gH~~~-~e~p~~v~~~i~~FL~~~~~ 321 (322)
T d1zd3a2 293 IEDCGHWTQ-MDKPTEVNQILIKWLDSDAR 321 (322)
T ss_dssp ETTCCSCHH-HHSHHHHHHHHHHHHHHHTC
T ss_pred ECCCCCchH-HhCHHHHHHHHHHHHhhcCC
Confidence 999999865 46677888899999998753
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.73 E-value=1.7e-16 Score=143.58 Aligned_cols=213 Identities=15% Similarity=0.141 Sum_probs=133.3
Q ss_pred EEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC
Q 011049 228 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 307 (494)
Q Consensus 228 ~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~ 307 (494)
+|++.||.++.+... + + -|.||++||.+.+ ...| ......|+++||.|+++|.+
T Consensus 2 ~f~~~dG~~i~y~~~---G-----~--g~pvvllHG~~~~-----------~~~~----~~~~~~l~~~~~~vi~~D~~- 55 (273)
T d1a8sa_ 2 TFTTRDGTQIYYKDW---G-----S--GQPIVFSHGWPLN-----------ADSW----ESQMIFLAAQGYRVIAHDRR- 55 (273)
T ss_dssp EEECTTSCEEEEEEE---S-----C--SSEEEEECCTTCC-----------GGGG----HHHHHHHHHTTCEEEEECCT-
T ss_pred EEEeeCCcEEEEEEE---C-----C--CCeEEEECCCCCC-----------HHHH----HHHHHHHHhCCCEEEEEech-
Confidence 688899999987654 1 1 3557889996521 1122 23455778899999996654
Q ss_pred CCCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHH-HHHHHHHhCCCceeEEEeCCCCCCCCCC
Q 011049 308 IIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAF-MTAHLLAHAPHLFCCGIARSGSYNKTLT 384 (494)
Q Consensus 308 ~~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~-~a~~~~~~~p~~~~a~v~~~~~~~~~~~ 384 (494)
|+|.+... .......++|+.+.++.+ +.++..++|+|+||. ++..++.++|++++.++.+++.......
T Consensus 56 --G~G~S~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~ 127 (273)
T d1a8sa_ 56 --GHGRSSQPWSGNDMDTYADDLAQLIEHL------DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLK 127 (273)
T ss_dssp --TSTTSCCCSSCCSHHHHHHHHHHHHHHT------TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBC
T ss_pred --hcCccccccccccccchHHHHHHHHHhc------CccceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccc
Confidence 55554322 223455666666665543 235678899998775 4555566779999988887664321110
Q ss_pred ----CCCccc-------------------------------ccccccc--------------------cHHHHHhcCccc
Q 011049 385 ----PFGFQT-------------------------------EFRTLWE--------------------ATNVYIEMSPIT 409 (494)
Q Consensus 385 ----~~~~~~-------------------------------~~~~~~~--------------------~~~~~~~~sp~~ 409 (494)
...... .....+. ....+...+...
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (273)
T d1a8sa_ 128 TEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTE 207 (273)
T ss_dssp CSSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHH
T ss_pred cccccccchhhhhhhHHHHHHHHHHHHHHHHhhhhhhhcccchhhhhHHHHHHHHHhhcccchhhhhhhHHHhhhhhhhH
Confidence 000000 0000000 001122233445
Q ss_pred cccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 410 HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 410 ~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
.+.++++|+|+++|++|..+| ...+.++.+.+. ..++++++|++||... .++.+.+.+.+.+||+
T Consensus 208 ~~~~i~~Pvlii~g~~D~~~~--~~~~~~~~~~~~---~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~Fl~ 272 (273)
T d1a8sa_ 208 DLKKIDVPTLVVHGDADQVVP--IEASGIASAALV---KGSTLKIYSGAPHGLT-DTHKDQLNADLLAFIK 272 (273)
T ss_dssp HHHTCCSCEEEEEETTCSSSC--STTTHHHHHHHS---TTCEEEEETTCCSCHH-HHTHHHHHHHHHHHHH
T ss_pred HHHhhccceEEEecCCCCCCC--HHHHHHHHHHhC---CCCEEEEECCCCCchH-HhCHHHHHHHHHHHcC
Confidence 567889999999999999987 666666665552 3468899999999875 3667788888999985
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.72 E-value=1.2e-16 Score=144.40 Aligned_cols=231 Identities=10% Similarity=0.061 Sum_probs=144.5
Q ss_pred ccEEEEEEcC-CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 223 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 223 ~~~~~~~~~~-dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
++|.+++++. .|.+++..++.|. .|+|+++||.+.. .....|.... ...+....++++|+
T Consensus 3 ~~e~~~v~s~~~~r~~~~~v~~~~---------~pvlylLhG~~g~---------~~~~~w~~~~-~~~~~~~~~~~iVV 63 (267)
T d1r88a_ 3 PYENLMVPSPSMGRDIPVAFLAGG---------PHAVYLLDAFNAG---------PDVSNWVTAG-NAMNTLAGKGISVV 63 (267)
T ss_dssp CCEEEEEEETTTTEEEEEEEECCS---------SSEEEEECCSSCC---------SSSCHHHHTS-CHHHHHTTSSSEEE
T ss_pred ceEEEEEecccCCceeeEEEECCC---------CCEEEEcCCCCCC---------CCcchhhhcc-HHHHHHhhCCeEEE
Confidence 4678888875 5678988887543 5999999994310 1111232222 23446677999999
Q ss_pred eCCCCCCCCCCCCC---CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC
Q 011049 302 AGPSIPIIGEGDKL---PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 302 ~~~~~~~~g~g~~~---~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 378 (494)
+++.- ..++.... ....+.....+|+ +.++.++..+|++|++|+|+||||++|+.+++++|++|+++++++|.
T Consensus 64 ~p~g~-~~~~y~~~~~~~~~~~~tfl~~eL---~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~ 139 (267)
T d1r88a_ 64 APAGG-AYSMYTNWEQDGSKQWDTFLSAEL---PDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGF 139 (267)
T ss_dssp EECCC-TTSTTSBCSSCTTCBHHHHHHTHH---HHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCC
T ss_pred EECCC-CCcCCccccccccccHHHHHHHHH---HHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCc
Confidence 97642 11222211 1233444444444 55677777789999999999999999999999999999999999998
Q ss_pred CCCCCCCCC------cc----ccccccc--ccHHHHHhcCccccccCC---CCCEEEEecCCCCCCCC---------CHH
Q 011049 379 YNKTLTPFG------FQ----TEFRTLW--EATNVYIEMSPITHANKI---KKPILIIHGEVDDKVGL---------FPM 434 (494)
Q Consensus 379 ~~~~~~~~~------~~----~~~~~~~--~~~~~~~~~sp~~~~~~~---~~P~li~~G~~D~~v~~---------~~~ 434 (494)
++....... .. ......| .....+.+.+|..+++++ ..++++.+|..|..+.. ...
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~d~~~~~~~~~~~~~~~~~ 219 (267)
T d1r88a_ 140 LYPSNTTTNGAIAAGMQQFGGVDTNGMWGAPQLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMG 219 (267)
T ss_dssp CCTTSHHHHHHHHHHHHHHHCCCTHHHHCCGGGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHH
T ss_pred cCCCCccchhhhhhHHhhhcCCcHhhccCCcchHhHHhcCHHHHHHhccccCceEEEEecCCCcccccchhhhhHHHhhh
Confidence 764221000 00 0000011 122345566777766554 46789999999876530 013
Q ss_pred HHHHHHHHHHhCC-CcEEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 435 QAERFFDALKGHG-ALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 435 ~~~~~~~~l~~~g-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
++.++.++|++.+ .++.+...++.+|.+. .+...+.++...|
T Consensus 220 ~~~~~~~~l~~~~g~~~~~~~~~~G~H~W~---~W~~~L~~~~p~~ 262 (267)
T d1r88a_ 220 NSRMFYNQYRSVGGHNGHFDFPASGDNGWG---SWAPQLGAMSGDI 262 (267)
T ss_dssp HHHHHHHHHHHTTCCSEEEECCSSCCSSHH---HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCCcEEEEEcCCCeEChH---HHHHHHHHHHHHH
Confidence 4567888888764 6788888888899763 2334444444444
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.72 E-value=1.3e-16 Score=142.30 Aligned_cols=197 Identities=10% Similarity=-0.030 Sum_probs=126.2
Q ss_pred cEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCch---hHHHHHHHHHHHH
Q 011049 256 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDR---FVEQLVSSAEAAV 332 (494)
Q Consensus 256 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~---~~~~~~~d~~~~v 332 (494)
|.||++||.+.+ ...|. .....|+++||.|+++|. +|+|.+..... ...+...|+...
T Consensus 3 ~~vvllHG~~~~-----------~~~w~----~~~~~L~~~g~~vi~~Dl---~G~G~S~~~~~~~~~~~~~~~~~~~~- 63 (258)
T d1xkla_ 3 KHFVLVHGACHG-----------GWSWY----KLKPLLEAAGHKVTALDL---AASGTDLRKIEELRTLYDYTLPLMEL- 63 (258)
T ss_dssp CEEEEECCTTCC-----------GGGGT----THHHHHHHTTCEEEECCC---TTSTTCCCCGGGCCSHHHHHHHHHHH-
T ss_pred CcEEEECCCCCC-----------HHHHH----HHHHHHHhCCCEEEEecC---CCCCCCCCCCCCCcchHHHHHHHhhh-
Confidence 578889997522 12232 355678889999999555 46666643221 223333333332
Q ss_pred HHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCC----------------c--------
Q 011049 333 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG----------------F-------- 388 (494)
Q Consensus 333 ~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~----------------~-------- 388 (494)
+ ..... ..++.++|||+||.+++.++.++|++++.+|.+++.......... .
T Consensus 64 --~-~~~~~-~~~~~lvghS~Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (258)
T d1xkla_ 64 --M-ESLSA-DEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGS 139 (258)
T ss_dssp --H-HTSCS-SSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSC
T ss_pred --h-hcccc-cccccccccchhHHHHHHHhhhhccccceEEEecccCCCcccchHHHHHHHhhhhhhhhhhhhhhhhhhh
Confidence 2 32222 357899999999999999999999999999988765321110000 0
Q ss_pred cccccccc-------------------------------ccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHH
Q 011049 389 QTEFRTLW-------------------------------EATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAE 437 (494)
Q Consensus 389 ~~~~~~~~-------------------------------~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~ 437 (494)
.......+ .....+...........+++|+++++|++|..+| +...+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~ 217 (258)
T d1xkla_ 140 PEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIP--EEFQR 217 (258)
T ss_dssp TTSCCEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTT--HHHHH
T ss_pred hhhhcccccccHHHHHHHhhhcccHHHHHHhhhhhhhhhhhhhhhhhhhhcccccccccceeEeeecCCCCCC--HHHHH
Confidence 00000000 0001112223334455677999999999999988 88877
Q ss_pred HHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 438 RFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 438 ~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
.+.+.+. ++++++++++||... .+..+.+.+.+.+|+++|
T Consensus 218 ~~~~~~~----~~~~~~i~~~gH~~~-~e~P~~~~~~l~e~~~k~ 257 (258)
T d1xkla_ 218 WQIDNIG----VTEAIEIKGADHMAM-LCEPQKLCASLLEIAHKY 257 (258)
T ss_dssp HHHHHHC----CSEEEEETTCCSCHH-HHSHHHHHHHHHHHHHHC
T ss_pred HHHHHCC----CCEEEEECCCCCchH-HhCHHHHHHHHHHHHHhc
Confidence 7777663 368899999999865 367788999999999886
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=99.71 E-value=5e-17 Score=147.75 Aligned_cols=209 Identities=15% Similarity=0.110 Sum_probs=124.7
Q ss_pred cccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCc--hhHHHHH----h
Q 011049 222 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTP--TSSLIFL----A 295 (494)
Q Consensus 222 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~----~ 295 (494)
.+.+.+++++.+| +..+++|+|++++++++ +|+|+++||++....+ .+..... .....+. .
T Consensus 25 g~v~~~~~~~~~~-~r~~~vylP~~y~~~k~--yPvl~~lhG~~g~~~~----------~~~~~~~~~~~~~~~~~~~~~ 91 (273)
T d1wb4a1 25 GRIVKETYTGING-TKSLNVYLPYGYDPNKK--YNIFYLMHGGGENENT----------IFSNDVKLQNILDHAIMNGEL 91 (273)
T ss_dssp CEEEEEEEEETTE-EEEEEEEECTTCCTTSC--CEEEEEECCTTCCTTS----------TTSTTTCHHHHHHHHHHHTSS
T ss_pred CeEEEEEEecCCC-eEEEEEEeCCCCCCCCC--ceEEEEEeCCCCCcch----------hhhhccchhHHHHhhhhhhcc
Confidence 4678899998888 56999999999987654 9999999998632211 0111111 1111122 2
Q ss_pred CCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH---------HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCC
Q 011049 296 RRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVE---------EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP 366 (494)
Q Consensus 296 ~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~---------~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p 366 (494)
..+.|+.++..+..+.+.. +......++...++ .+..+..+|++|++|+|+|+||++|+.++.++|
T Consensus 92 ~~~~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~p 166 (273)
T d1wb4a1 92 EPLIVVTPTFNGGNCTAQN-----FYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCL 166 (273)
T ss_dssp CCEEEEECCSCSTTCCTTT-----HHHHHHHTHHHHHHHHSCCSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHT
T ss_pred CCceeeccccCCCCCcccc-----chhcccccccchhhhhhhhhhhhhhhhcccCCccceEEEeeCCcchhhhhhhhcCC
Confidence 4688888666544333222 22222222222221 122233478999999999999999999999999
Q ss_pred CceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHH--
Q 011049 367 HLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALK-- 444 (494)
Q Consensus 367 ~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~-- 444 (494)
++|+++++++|........ ............. ........++++.+|+.|.. ......+.+.+.
T Consensus 167 d~f~a~~~~sg~~~~~~~~------~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~ 232 (273)
T d1wb4a1 167 DYVAYFMPLSGDYWYGNSP------QDKANSIAEAINR----SGLSKREYFVFAATGSEDIA----YANMNPQIEAMKAL 232 (273)
T ss_dssp TTCCEEEEESCCCCBSSSH------HHHHHHHHHHHHH----HTCCTTSCEEEEEEETTCTT----HHHHHHHHHHHHTS
T ss_pred CcceEEEEeCcccccCCCc------ccccccchhhhhh----hhhcccceEEEEecCCCCcc----cccchhHHHHHHHH
Confidence 9999999999965421110 0000000000100 11222335577778877764 444455555443
Q ss_pred --------hCCCcEEEEEcCCCCCcc
Q 011049 445 --------GHGALSRLVLLPFEHHVY 462 (494)
Q Consensus 445 --------~~g~~~~~~~~~~~~H~~ 462 (494)
..++.+.+.++++++|.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~ggH~w 258 (273)
T d1wb4a1 233 PHFDYTSDFSKGNFYFLVAPGATHWW 258 (273)
T ss_dssp TTCCBBSCTTTCCEEEEEETTCCSSH
T ss_pred HHHHHHHHhcCCCEEEEEECCCccCH
Confidence 335678899999999964
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.70 E-value=7.2e-16 Score=139.68 Aligned_cols=197 Identities=13% Similarity=0.028 Sum_probs=122.5
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCC--CchhHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP--NDRFVEQLVSSAEAAV 332 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~--~~~~~~~~~~d~~~~v 332 (494)
-|.||++||.+.+ ...| ......|+++||.|+++|.+ |+|.+.. .....+..++|+.+.+
T Consensus 23 G~~ivllHG~~~~-----------~~~~----~~~~~~l~~~g~~vi~~D~~---G~G~S~~~~~~~~~~~~~~dl~~~l 84 (277)
T d1brta_ 23 GQPVVLIHGFPLS-----------GHSW----ERQSAALLDAGYRVITYDRR---GFGQSSQPTTGYDYDTFAADLNTVL 84 (277)
T ss_dssp SSEEEEECCTTCC-----------GGGG----HHHHHHHHHTTCEEEEECCT---TSTTSCCCSSCCSHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCC-----------HHHH----HHHHHHHHhCCCEEEEEeCC---CCCcccccccccchhhhhhhhhhhh
Confidence 3668899996521 1112 13455778899999996665 4555532 2223566677877777
Q ss_pred HHHHHcCCCCCCcEEEEecChHH-HHHHHHHHhCCCceeEEEeCCCCCCCCCCC----CCcc-cc-----------c---
Q 011049 333 EEVVRRGVADPSRIAVGGHSYGA-FMTAHLLAHAPHLFCCGIARSGSYNKTLTP----FGFQ-TE-----------F--- 392 (494)
Q Consensus 333 ~~l~~~~~~d~~ri~i~G~S~GG-~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~----~~~~-~~-----------~--- 392 (494)
+.+ + .+++.++|||+|| .++..++.++|++++++|.++++....... .... .. .
T Consensus 85 ~~l---~---~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (277)
T d1brta_ 85 ETL---D---LQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYA 158 (277)
T ss_dssp HHH---T---CCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHH
T ss_pred hcc---C---cccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhhhHHHHHHHhhhccchh
Confidence 665 3 3689999999996 556667788899999999887654311100 0000 00 0
Q ss_pred ------cc------c--cc-cHH----H------------HH-----hcCccccccCCCCCEEEEecCCCCCCCCCHHHH
Q 011049 393 ------RT------L--WE-ATN----V------------YI-----EMSPITHANKIKKPILIIHGEVDDKVGLFPMQA 436 (494)
Q Consensus 393 ------~~------~--~~-~~~----~------------~~-----~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~ 436 (494)
.. . .. ... . +. ..+....+.++++|+++++|++|..++ +...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~--~~~~ 236 (277)
T d1brta_ 159 FYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLP--IENT 236 (277)
T ss_dssp HHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSC--GGGT
T ss_pred hhhhccccccccchhhhhhhhHHHhhhhhcccchhhhhhhhhhhhhhhhhHHHHHHhcCccceeEeecCCCCcC--HHHH
Confidence 00 0 00 000 0 00 011223456788999999999999987 6654
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 437 ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 437 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
.+.... ....+++++++++||.+. .++.+.+.+.+.+||++
T Consensus 237 ~~~~~~---~~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fL~k 277 (277)
T d1brta_ 237 ARVFHK---ALPSAEYVEVEGAPHGLL-WTHAEEVNTALLAFLAK 277 (277)
T ss_dssp HHHHHH---HCTTSEEEEETTCCTTHH-HHTHHHHHHHHHHHHHC
T ss_pred HHHHHH---hCCCCEEEEECCCCCchH-HhCHHHHHHHHHHHHCc
Confidence 443332 233468999999999865 46777888899999874
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=99.70 E-value=9.2e-17 Score=149.08 Aligned_cols=122 Identities=14% Similarity=0.036 Sum_probs=83.6
Q ss_pred EEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCC
Q 011049 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 304 (494)
Q Consensus 225 ~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 304 (494)
+.-.++..||.++.+..+-.++ -|.||++||++.+. ..|. ....+.+.+|.|+++|
T Consensus 12 ~~~~i~~~dg~~i~y~~~G~~~--------g~pvvllHG~~g~~-----------~~~~-----~~~~~l~~~~~Vi~~D 67 (313)
T d1azwa_ 12 QQGSLKVDDRHTLYFEQCGNPH--------GKPVVMLHGGPGGG-----------CNDK-----MRRFHDPAKYRIVLFD 67 (313)
T ss_dssp EEEEEECSSSCEEEEEEEECTT--------SEEEEEECSTTTTC-----------CCGG-----GGGGSCTTTEEEEEEC
T ss_pred CCCEEEeCCCcEEEEEEecCCC--------CCEEEEECCCCCCc-----------cchH-----HHhHHhhcCCEEEEEe
Confidence 5556777899999888775432 35678899975211 1121 1123356899999966
Q ss_pred CCCCCCCCCCCCC---c-hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC
Q 011049 305 SIPIIGEGDKLPN---D-RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 379 (494)
Q Consensus 305 ~~~~~g~g~~~~~---~-~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 379 (494)
.+ |+|.+... . ....+.++|+...++.+ + .+++.|+|||+||.+++.++.++|++++.++..++..
T Consensus 68 ~r---G~G~S~~~~~~~~~~~~~~~~dl~~~~~~l---~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~ 137 (313)
T d1azwa_ 68 QR---GSGRSTPHADLVDNTTWDLVADIERLRTHL---G---VDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFL 137 (313)
T ss_dssp CT---TSTTSBSTTCCTTCCHHHHHHHHHHHHHHT---T---CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred cc---ccCCCCccccccchhHHHHHHHHHHHHHhh---c---cccceeEEecCCcHHHHHHHHHhhhceeeeeEecccc
Confidence 55 56666422 1 12455666766666654 2 3679999999999999999999999999999877653
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.69 E-value=1.3e-16 Score=145.84 Aligned_cols=211 Identities=15% Similarity=0.097 Sum_probs=133.3
Q ss_pred cCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCC
Q 011049 231 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 310 (494)
Q Consensus 231 ~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g 310 (494)
..||.++++..+-|++ .|+||++||.+.+ ...|. .....| +.||.|++++.+ |
T Consensus 13 ~~~g~~i~y~~~G~~~--------~p~lvllHG~~~~-----------~~~~~----~~~~~L-~~~~~vi~~d~~---G 65 (291)
T d1bn7a_ 13 EVLGERMHYVDVGPRD--------GTPVLFLHGNPTS-----------SYLWR----NIIPHV-APSHRCIAPDLI---G 65 (291)
T ss_dssp EETTEEEEEEEESCSS--------SSCEEEECCTTCC-----------GGGGT----TTHHHH-TTTSCEEEECCT---T
T ss_pred EECCEEEEEEEeCCCC--------CCeEEEECCCCCC-----------HHHHH----HHHHHH-hcCCEEEEEeCC---C
Confidence 3588899887775443 4678899996522 12232 223344 569999996665 4
Q ss_pred CCCCCC--CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC-CC
Q 011049 311 EGDKLP--NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-FG 387 (494)
Q Consensus 311 ~g~~~~--~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~-~~ 387 (494)
+|.+.. .....+..++|+.+.++.+ +-+++.++|||+||.+++.++.++|+++++++++.+........ +.
T Consensus 66 ~G~S~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~ 139 (291)
T d1bn7a_ 66 MGKSDKPDLDYFFDDHVRYLDAFIEAL------GLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWP 139 (291)
T ss_dssp STTSCCCSCCCCHHHHHHHHHHHHHHT------TCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSC
T ss_pred CccccccccccchhHHHHHHhhhhhhh------ccccccccccccccchhHHHHHhCCcceeeeeeeccccCCccchhhh
Confidence 555432 2223455666766666543 34689999999999999999999999999999876543211000 00
Q ss_pred --------------cc----------------ccccccc--ccHHHHH-----------------hc-------------
Q 011049 388 --------------FQ----------------TEFRTLW--EATNVYI-----------------EM------------- 405 (494)
Q Consensus 388 --------------~~----------------~~~~~~~--~~~~~~~-----------------~~------------- 405 (494)
.. ......+ .....+. ..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (291)
T d1bn7a_ 140 EFARETFQAFRTADVGRELIIDQNAFIEGVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALV 219 (291)
T ss_dssp HHHHHHHHHHTSTTHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHH
T ss_pred hhhhhHHHHHhhhhhHHHhhhhhhhhHHhhhhhhccccchHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhchhhhhh
Confidence 00 0000000 0000000 00
Q ss_pred -CccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 406 -SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 406 -sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
.....+.++++|+|+++|++|..+| ...+..+.+.+. .+++++++++||.+. .+..+.+.+.+.+||+.
T Consensus 220 ~~~~~~~~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~v~~~i~~fL~~ 289 (291)
T d1bn7a_ 220 EAYMNWLHQSPVPKLLFWGTPGVLIP--PAEAARLAESLP----NCKTVDIGPGLHYLQ-EDNPDLIGSEIARWLPG 289 (291)
T ss_dssp HHHHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHHHST----TEEEEEEEEESSCGG-GTCHHHHHHHHHHHSGG
T ss_pred hhhhhhhhcCCCCEEEEEeCCCCCcC--HHHHHHHHHHCC----CCEEEEECCCCCchH-HhCHHHHHHHHHHHHHh
Confidence 0112245688999999999999988 888777776663 478999999999765 46677788888888763
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.69 E-value=1.1e-16 Score=136.56 Aligned_cols=179 Identities=11% Similarity=-0.063 Sum_probs=109.3
Q ss_pred EEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 011049 257 CLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVV 336 (494)
Q Consensus 257 ~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~ 336 (494)
.||++||.+ +++ ...+.......|+++||.|++++.. |.|.. . .+|. ++.+.
T Consensus 3 ~V~~vHG~~-----------~~~--~~~~~~~l~~~L~~~G~~v~~~d~p---~~~~~-----~----~~~~---~~~l~ 54 (186)
T d1uxoa_ 3 QVYIIHGYR-----------ASS--TNHWFPWLKKRLLADGVQADILNMP---NPLQP-----R----LEDW---LDTLS 54 (186)
T ss_dssp EEEEECCTT-----------CCT--TSTTHHHHHHHHHHTTCEEEEECCS---CTTSC-----C----HHHH---HHHHH
T ss_pred EEEEECCCC-----------CCc--chhHHHHHHHHHHhCCCEEEEeccC---CCCcc-----h----HHHH---HHHHH
Confidence 488999953 221 1112234566889999999997764 33322 1 2222 23333
Q ss_pred HcCCCCCCcEEEEecChHHHHHHHHHHhCCCce--eEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCC
Q 011049 337 RRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLF--CCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKI 414 (494)
Q Consensus 337 ~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~--~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~ 414 (494)
+.......+++++|||+||++++.++.++|... .++++.++............. ......+.....++
T Consensus 55 ~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~ 124 (186)
T d1uxoa_ 55 LYQHTLHENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQMLDE----------FTQGSFDHQKIIES 124 (186)
T ss_dssp TTGGGCCTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCGGGGG----------GTCSCCCHHHHHHH
T ss_pred HHHhccCCCcEEEEechhhHHHHHHHHhCCccceeeEEeecccccccchhhhhhhh----------hhcccccccccccC
Confidence 332244588999999999999999999998644 344444443322111100000 00001111222234
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCc--ccHHHHHHHHHHHHH
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR--ENVMHVIWETDRWLQ 480 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~--~~~~~~~~~~~~fl~ 480 (494)
.+|+|++||++|+.|| +.+++++++.+. ++++++++++|..... .......+.+.+||.
T Consensus 125 ~~p~lvi~g~~D~~vp--~~~~~~l~~~~~-----~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~~~ 185 (186)
T d1uxoa_ 125 AKHRAVIASKDDQIVP--FSFSKDLAQQID-----AALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFS 185 (186)
T ss_dssp EEEEEEEEETTCSSSC--HHHHHHHHHHTT-----CEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCCCCC--HHHHHHHHHHcC-----CEEEEeCCCCCcCccccCcccHHHHHHHHHHHc
Confidence 6899999999999998 999999888772 5899999999965321 223466777777775
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.68 E-value=1.7e-16 Score=146.87 Aligned_cols=214 Identities=13% Similarity=0.040 Sum_probs=132.7
Q ss_pred cCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCC
Q 011049 231 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 310 (494)
Q Consensus 231 ~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g 310 (494)
+.||.++++.-.-+++ ..|+||++||.+.+ ...|. .....|+.+||.|++++. .|
T Consensus 30 ~~~g~~~~y~~~G~~~-------~~p~llllHG~~~~-----------~~~~~----~~~~~l~~~~~~vi~~Dl---~G 84 (310)
T d1b6ga_ 30 GYPGLRAHYLDEGNSD-------AEDVFLCLHGEPTW-----------SYLYR----KMIPVFAESGARVIAPDF---FG 84 (310)
T ss_dssp TCTTCEEEEEEEECTT-------CSCEEEECCCTTCC-----------GGGGT----TTHHHHHHTTCEEEEECC---TT
T ss_pred CCCCEEEEEEEecCCC-------CCCEEEEECCCCCc-----------hHHHH----HHHHHhhccCceEEEeee---cC
Confidence 4588888766554432 26899999997521 11232 344578889999999554 46
Q ss_pred CCCCCCC--c--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCC
Q 011049 311 EGDKLPN--D--RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF 386 (494)
Q Consensus 311 ~g~~~~~--~--~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~ 386 (494)
+|.+... . ......++|+.+.++.+ + .+++.++|||+||.+++.+|.++|++++++|++++.........
T Consensus 85 ~G~S~~~~~~~~~~~~~~~~~l~~~l~~l---~---~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~ 158 (310)
T d1b6ga_ 85 FGKSDKPVDEEDYTFEFHRNFLLALIERL---D---LRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQ 158 (310)
T ss_dssp STTSCEESCGGGCCHHHHHHHHHHHHHHH---T---CCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTC
T ss_pred ccccccccccccccccccccchhhhhhhc---c---ccccccccceecccccccchhhhccccceEEEEcCccCCCcccc
Confidence 6666422 1 13455566666665543 2 36899999999999999999999999999998876532110000
Q ss_pred -Ccc--------------c-----c-c--------cccc---ccHHHHHh----------------c-------------
Q 011049 387 -GFQ--------------T-----E-F--------RTLW---EATNVYIE----------------M------------- 405 (494)
Q Consensus 387 -~~~--------------~-----~-~--------~~~~---~~~~~~~~----------------~------------- 405 (494)
.+. . . . ...+ .....|.. .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (310)
T d1b6ga_ 159 PAFSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDIST 238 (310)
T ss_dssp THHHHTTTSSTTTHHHHHHHHHSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHH
T ss_pred hhHHHHhhcchhhhhhhhhhhccchhhhhhhhhhccCccccHHHHHHHHhhcchhhhhhcchhhhhhhhhhhhhhhhhhh
Confidence 000 0 0 0 0000 00000000 0
Q ss_pred -CccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 406 -SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 406 -sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
.......++++|+|+++|++|..++ +.....+.+.+... .++++++++||.+. .+..+.+.+.+.+||+.
T Consensus 239 ~~~~~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~~~~~~---~~~~~i~~~GH~~~-~e~pe~v~~~i~~Fl~~ 309 (310)
T d1b6ga_ 239 EAISFWQNDWNGQTFMAIGMKDKLLG--PDVMYPMKALINGC---PEPLEIADAGHFVQ-EFGEQVAREALKHFAET 309 (310)
T ss_dssp HHHHHHHHTCCSEEEEEEETTCSSSS--HHHHHHHHHHSTTC---CCCEEETTCCSCGG-GGHHHHHHHHHHHHHHT
T ss_pred hhhHHhhcccCCCeEEEEeCCCCCCC--HHHHHHHHHhcCCC---ccEEEECCCcCchh-hhCHHHHHHHHHHHHhC
Confidence 0001234678999999999999987 77766666655432 36778999999764 45566677777788763
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.67 E-value=6.8e-16 Score=137.72 Aligned_cols=195 Identities=8% Similarity=-0.049 Sum_probs=122.4
Q ss_pred EEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCc---hhHHHHHHHHHHHHHH
Q 011049 258 LFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAAVEE 334 (494)
Q Consensus 258 vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~v~~ 334 (494)
.|++||.+.+. ..|. .....|+++||.|+++|. +|+|.+.... ...+...+|+.+.+
T Consensus 5 ~vliHG~~~~~-----------~~w~----~~~~~L~~~g~~Via~Dl---~G~G~S~~~~~~~~~~~~~~~~l~~~~-- 64 (256)
T d3c70a1 5 FVLIHTICHGA-----------WIWH----KLKPLLEALGHKVTALDL---AASGVDPRQIEEIGSFDEYSEPLLTFL-- 64 (256)
T ss_dssp EEEECCTTCCG-----------GGGT----THHHHHHHTTCEEEEECC---TTSTTCSCCGGGCCSHHHHTHHHHHHH--
T ss_pred EEEeCCCCCCH-----------HHHH----HHHHHHHhCCCEEEEEcC---CCCCCCCCCCCCCCCHHHHHHHhhhhh--
Confidence 57899975221 2232 345678889999999555 4666664321 12344455544443
Q ss_pred HHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCc--------------c------ccc--
Q 011049 335 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGF--------------Q------TEF-- 392 (494)
Q Consensus 335 l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~--------------~------~~~-- 392 (494)
.+.. ..+++.++|||+||.+++.++..+|++++++|.+++........... . ...
T Consensus 65 -~~~~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (256)
T d3c70a1 65 -EALP--PGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKE 141 (256)
T ss_dssp -HHSC--TTCCEEEEEETTHHHHHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEE
T ss_pred -hhhc--cccceeecccchHHHHHHHHhhcCchhhhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHHhhhccccc
Confidence 3333 34789999999999999999999999999999887653211110000 0 000
Q ss_pred -cccccc------------------------------HHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHH
Q 011049 393 -RTLWEA------------------------------TNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFD 441 (494)
Q Consensus 393 -~~~~~~------------------------------~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~ 441 (494)
...... ...............+++|+++++|++|..+| +...+.+.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~ 219 (256)
T d3c70a1 142 ITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFL--PEFQLWQIE 219 (256)
T ss_dssp EEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHTTSCCCCTTTGGGSCEEEEECTTCSSSC--HHHHHHHHH
T ss_pred cchhhhhhhhhhhhhhhhcchhhHHHhhhhhhhhhHHHhhhhhcchhhhhhccccceeEEeecCCCCCC--HHHHHHHHH
Confidence 000000 00011112222334457999999999999987 776666655
Q ss_pred HHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 442 ALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 442 ~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
.+ ...++++++++||... .+.++.+.+.+.+|++++
T Consensus 220 ~~----p~~~~~~i~~agH~~~-~e~P~~~~~~l~~~~~~~ 255 (256)
T d3c70a1 220 NY----KPDKVYKVEGGDHKLQ-LTKTKEIAEILQEVADTY 255 (256)
T ss_dssp HS----CCSEEEECCSCCSCHH-HHSHHHHHHHHHHHHHHC
T ss_pred HC----CCCEEEEECCCCCchH-HhCHHHHHHHHHHHHHhc
Confidence 44 3468999999999866 467778888888988875
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.67 E-value=9e-16 Score=139.62 Aligned_cols=220 Identities=13% Similarity=0.080 Sum_probs=136.3
Q ss_pred cccEEEEEEcC-CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEE
Q 011049 222 LQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 300 (494)
Q Consensus 222 ~~~~~~~~~~~-dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 300 (494)
++++.+++++. -|..|+..+. + +++|+|+++||.+.. .+...|.... ...+.+.++|++|
T Consensus 4 ~~v~~~~~~s~~~~r~i~~~~~-~--------~~~p~lyllhG~~g~---------~d~~~W~~~~-~~~~~~~~~~~iv 64 (280)
T d1dqza_ 4 LPVEYLQVPSASMGRDIKVQFQ-G--------GGPHAVYLLDGLRAQ---------DDYNGWDINT-PAFEEYYQSGLSV 64 (280)
T ss_dssp SCEEEEEEEETTTTEEEEEEEE-C--------CSSSEEEECCCTTCC---------SSSCHHHHHS-CHHHHHTTSSSEE
T ss_pred cEEEEEEEecccCCCcceEEee-C--------CCCCEEEECCCCCCC---------Cccchhhhcc-hHHHHHHhCCcEE
Confidence 46777888764 5677777763 1 127999999995311 0111122111 2334677899999
Q ss_pred EeCCCCCCCCCCC---------CCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeE
Q 011049 301 LAGPSIPIIGEGD---------KLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCC 371 (494)
Q Consensus 301 ~~~~~~~~~g~g~---------~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a 371 (494)
++++......+.. ......+.....+++ +.++.++..+|++|++|+|+||||++|+.+++++|++|++
T Consensus 65 V~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el---~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~a 141 (280)
T d1dqza_ 65 IMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREM---PAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPY 141 (280)
T ss_dssp EEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHH---HHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSE
T ss_pred EEECCCCCCcCccccCCcccccCCcchhHHHHHHHHH---HHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCcCceeE
Confidence 9976422111110 011223444445544 5556666678999999999999999999999999999999
Q ss_pred EEeCCCCCCCCCCCCCcc----------ccccccc--ccHHHHHhcCccccccCC---CCCEEEEecCCCCCCCCC----
Q 011049 372 GIARSGSYNKTLTPFGFQ----------TEFRTLW--EATNVYIEMSPITHANKI---KKPILIIHGEVDDKVGLF---- 432 (494)
Q Consensus 372 ~v~~~~~~~~~~~~~~~~----------~~~~~~~--~~~~~~~~~sp~~~~~~~---~~P~li~~G~~D~~v~~~---- 432 (494)
+++++|..+......... ......+ .....+...+|...++++ ..++++.+|..|...+..
T Consensus 142 v~s~SG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~ 221 (280)
T d1dqza_ 142 AASLSGFLNPSESWWPTLIGLAMNDSGGYNANSMWGPSSDPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIP 221 (280)
T ss_dssp EEEESCCCCTTSTTHHHHHHHHHHHTTSCCHHHHHCSTTSHHHHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHH
T ss_pred EEEecCccCcccCcchhhhhhhHhhccCCCHhhccCCcchhhhhhcCHHHHHHHhhhcCCeEEEEeCCCCCccccccccc
Confidence 999999876432211000 0000011 112345667887777665 368899999887654200
Q ss_pred --------HHHHHHHHHHHHhCCCcEEEEEc-CCCCCccC
Q 011049 433 --------PMQAERFFDALKGHGALSRLVLL-PFEHHVYA 463 (494)
Q Consensus 433 --------~~~~~~~~~~l~~~g~~~~~~~~-~~~~H~~~ 463 (494)
...+.++.+.|+++++......+ ++.+|.+.
T Consensus 222 ~~~~e~~~~~~~~~~~~~l~~~g~~~~~~~~~~~GgH~W~ 261 (280)
T d1dqza_ 222 AKFLEGLTLRTNQTFRDTYAADGGRNGVFNFPPNGTHSWP 261 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCSEEEECCSCCCSSHH
T ss_pred cchhhHHHHHHHHHHHHHHHHcCCCeEEEEEcCCCccCch
Confidence 24567888999998876555554 46689763
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=99.65 E-value=1.8e-15 Score=137.22 Aligned_cols=196 Identities=16% Similarity=0.114 Sum_probs=119.3
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC--chhHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAV 332 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~v 332 (494)
-|.||++||.+.+. ..| ......|+++||.|+++|.+ |+|.+... ....+..++|+.+.+
T Consensus 23 g~~illlHG~~~~~-----------~~~----~~~~~~l~~~~~~vi~~D~~---G~G~S~~~~~~~~~~~~~~di~~~i 84 (279)
T d1hkha_ 23 GQPVVLIHGYPLDG-----------HSW----ERQTRELLAQGYRVITYDRR---GFGGSSKVNTGYDYDTFAADLHTVL 84 (279)
T ss_dssp SEEEEEECCTTCCG-----------GGG----HHHHHHHHHTTEEEEEECCT---TSTTSCCCSSCCSHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCH-----------HHH----HHHHHHHHHCCCEEEEEech---hhCCccccccccchhhhhhhhhhhh
Confidence 46789999965221 112 23445678899999996654 55555322 223456677777777
Q ss_pred HHHHHcCCCCCCcEEEEecChHH-HHHHHHHHhCCCceeEEEeCCCCCCCCCCC----CCccccc---------------
Q 011049 333 EEVVRRGVADPSRIAVGGHSYGA-FMTAHLLAHAPHLFCCGIARSGSYNKTLTP----FGFQTEF--------------- 392 (494)
Q Consensus 333 ~~l~~~~~~d~~ri~i~G~S~GG-~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~----~~~~~~~--------------- 392 (494)
+.+ +.+++.++|||+|| .++..++.++|++++.++++++........ ..+....
T Consensus 85 ~~l------~~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (279)
T d1hkha_ 85 ETL------DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAW 158 (279)
T ss_dssp HHH------TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHH
T ss_pred hhc------CcCccccccccccccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHHHHHHhhhhhhhhh
Confidence 665 23689999999996 666667778899999999887653211100 0000000
Q ss_pred ---------------cccc-cc-H----HHHHhcC-----------------ccccccCCCCCEEEEecCCCCCCCCCHH
Q 011049 393 ---------------RTLW-EA-T----NVYIEMS-----------------PITHANKIKKPILIIHGEVDDKVGLFPM 434 (494)
Q Consensus 393 ---------------~~~~-~~-~----~~~~~~s-----------------p~~~~~~~~~P~li~~G~~D~~v~~~~~ 434 (494)
.... +. . ....... .+..+.++++|+|+++|++|..+| ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~--~~ 236 (279)
T d1hkha_ 159 FTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILP--ID 236 (279)
T ss_dssp HHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSC--TT
T ss_pred hhhhhhhhcccchhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhcccccchhhhcccCCceEEEEcCCCCccC--HH
Confidence 0000 00 0 0000000 112234567999999999999987 54
Q ss_pred H-HHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 435 Q-AERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 435 ~-~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
. .+.+.+.+ ..+++++++++||.+. .+..+.+.+.+.+||.+
T Consensus 237 ~~~~~~~~~~----p~~~~~~i~~~gH~~~-~e~p~~v~~~i~~fl~k 279 (279)
T d1hkha_ 237 ATARRFHQAV----PEADYVEVEGAPHGLL-WTHADEVNAALKTFLAK 279 (279)
T ss_dssp TTHHHHHHHC----TTSEEEEETTCCTTHH-HHTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhC----CCCEEEEECCCCCchH-HhCHHHHHHHHHHHHCc
Confidence 3 33333332 3468899999999865 36677888889999874
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.63 E-value=6.8e-15 Score=135.13 Aligned_cols=216 Identities=15% Similarity=0.062 Sum_probs=129.9
Q ss_pred EEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCC
Q 011049 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 304 (494)
Q Consensus 225 ~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 304 (494)
+.-.+++.||.+|.+..+-+++ .|.||++||.+.+. ..|.. . ..++++||.|+++|
T Consensus 12 ~~~~v~~~dG~~i~y~~~G~~~--------g~pvvllHG~~~~~-----------~~w~~----~-~~~l~~~~~vi~~D 67 (313)
T d1wm1a_ 12 DSGWLDTGDGHRIYWELSGNPN--------GKPAVFIHGGPGGG-----------ISPHH----R-QLFDPERYKVLLFD 67 (313)
T ss_dssp EEEEEECSSSCEEEEEEEECTT--------SEEEEEECCTTTCC-----------CCGGG----G-GGSCTTTEEEEEEC
T ss_pred cCCEEEeCCCcEEEEEEecCCC--------CCeEEEECCCCCcc-----------cchHH----H-HHHhhcCCEEEEEe
Confidence 3444667899999988875543 35688899976322 22321 1 12356899999966
Q ss_pred CCCCCCCCCCCCC----chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCC
Q 011049 305 SIPIIGEGDKLPN----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 380 (494)
Q Consensus 305 ~~~~~g~g~~~~~----~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~ 380 (494)
.+ |+|.+... ........+|+...++. . ...++.++|||+||.++..++..+|++++..+...+...
T Consensus 68 ~r---G~G~S~~~~~~~~~~~~~~~~d~~~~~~~---~---~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~~ 138 (313)
T d1wm1a_ 68 QR---GCGRSRPHASLDNNTTWHLVADIERLREM---A---GVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTL 138 (313)
T ss_dssp CT---TSTTCBSTTCCTTCSHHHHHHHHHHHHHH---T---TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCC
T ss_pred CC---CcccccccccccccchhhHHHHHHhhhhc---c---CCCcceeEeeecCCchhhHHHHHHhhhheeeeecccccc
Confidence 65 55555322 11133344444444332 2 347899999999999999999999999999998765432
Q ss_pred CCC-------------------------CCCCccc-------------------------------------cccccccc
Q 011049 381 KTL-------------------------TPFGFQT-------------------------------------EFRTLWEA 398 (494)
Q Consensus 381 ~~~-------------------------~~~~~~~-------------------------------------~~~~~~~~ 398 (494)
... ....... ........
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (313)
T d1wm1a_ 139 RKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGE 218 (313)
T ss_dssp CHHHHHHHHTSSGGGTSHHHHHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGC
T ss_pred cccccccccccccchhhhhhhhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhh
Confidence 100 0000000 00000000
Q ss_pred HH----------HHHhc---------CccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCC
Q 011049 399 TN----------VYIEM---------SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEH 459 (494)
Q Consensus 399 ~~----------~~~~~---------sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 459 (494)
.. ..... ........+++|+|+++|++|..+| +..++++.+.+. ++++++++++|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~D~~~p--~~~~~~l~~~~p----~a~~~~i~~aG 292 (313)
T d1wm1a_ 219 DDFALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQ--VQNAWDLAKAWP----EAELHIVEGAG 292 (313)
T ss_dssp HHHHHHHHHHHHHHHHTGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSC--HHHHHHHHHHCT----TSEEEEETTCC
T ss_pred hhHHhhhhhhhhhhhhhhcccccchhhhhhhhhhCCCCEEEEEECCCCccC--HHHHHHHHHHCC----CCEEEEECCCC
Confidence 00 00000 0011234467999999999999988 888888777764 36899999999
Q ss_pred CccCCcccHHHHHHHHHHHHHHhc
Q 011049 460 HVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 460 H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
|.+.. .+...++++.+++..
T Consensus 293 H~~~e----P~~~~~lv~a~~~f~ 312 (313)
T d1wm1a_ 293 HSYDE----PGILHQLMIATDRFA 312 (313)
T ss_dssp SSTTS----HHHHHHHHHHHHHHT
T ss_pred CCcCC----chHHHHHHHHHHHhc
Confidence 96532 244556677776653
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.63 E-value=1.6e-15 Score=137.85 Aligned_cols=95 Identities=4% Similarity=-0.084 Sum_probs=73.7
Q ss_pred CccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeec--cceEEEEEcCCCCCCCceEeeeccccccc
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT--SQTRTWLVCPGSKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~--~~~~~~~~~~~~g~~~~~~lt~~~~~~~~ 92 (494)
...++||++++ +++++++||..+.....|+|||||++|||.+.+++ ...+||+++++++ +.++||........
T Consensus 18 ~~~~dl~~~d~---~~g~~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g--~~~~lt~~~~~~~~ 92 (281)
T d1k32a2 18 VCCDDLWEHDL---KSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENG--EIKRITYFSGKSTG 92 (281)
T ss_dssp EETTEEEEEET---TTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTT--EEEECCCCCEEEET
T ss_pred EeCCcEEEEEC---CCCCEEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCC--ceEEeeecCCCccC
Confidence 35679999999 99999999999988999999999999999987554 2468999999998 88999877643211
Q ss_pred CCCCCCceeeCCCCCEEEEEEe
Q 011049 93 SDPGSPMMTRTSTGTNVIAKIK 114 (494)
Q Consensus 93 ~~~~~~~~~~spDG~~i~~~~~ 114 (494)
.........|||||+.|+|...
T Consensus 93 ~~~~~~~~~~spdg~~l~~~~~ 114 (281)
T d1k32a2 93 RRMFTDVAGFDPDGNLIISTDA 114 (281)
T ss_dssp TEECSEEEEECTTCCEEEEECT
T ss_pred ccccccccccCCCCCEEEEEEc
Confidence 0001112239999999998653
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=99.62 E-value=1.8e-14 Score=131.35 Aligned_cols=213 Identities=15% Similarity=0.057 Sum_probs=126.3
Q ss_pred EEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCC
Q 011049 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 304 (494)
Q Consensus 225 ~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 304 (494)
+..+++. +|.++++... + . -|+||++||.+.+ ...|. .....| .++|.|+++|
T Consensus 9 ~~~~~~~-~~~~l~y~~~---G-----~--gp~vv~lHG~~~~-----------~~~~~----~~~~~l-~~~~~vi~~D 61 (293)
T d1ehya_ 9 KHYEVQL-PDVKIHYVRE---G-----A--GPTLLLLHGWPGF-----------WWEWS----KVIGPL-AEHYDVIVPD 61 (293)
T ss_dssp CEEEEEC-SSCEEEEEEE---E-----C--SSEEEEECCSSCC-----------GGGGH----HHHHHH-HTTSEEEEEC
T ss_pred cceEEEE-CCEEEEEEEE---C-----C--CCeEEEECCCCCC-----------HHHHH----HHHHHH-hcCCEEEEec
Confidence 4445553 6778876543 1 1 4789999996521 11221 223344 5689999966
Q ss_pred CCCCCCCCCCCCC------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC
Q 011049 305 SIPIIGEGDKLPN------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 305 ~~~~~g~g~~~~~------~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 378 (494)
.+ |+|.+... ....+..++|+.+.++.+ + .+++.++|||+||.+++.++.++|++++++|+.++.
T Consensus 62 ~~---G~G~s~~~~~~~~~~~~~~~~a~~~~~~~~~l---~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 132 (293)
T d1ehya_ 62 LR---GFGDSEKPDLNDLSKYSLDKAADDQAALLDAL---G---IEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPI 132 (293)
T ss_dssp CT---TSTTSCCCCTTCGGGGCHHHHHHHHHHHHHHT---T---CCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCS
T ss_pred CC---cccCCccccccccccccchhhhhHHHhhhhhc---C---ccccccccccccccchhcccccCccccceeeeeecc
Confidence 65 45544221 112344555555544432 3 368999999999999999999999999999998875
Q ss_pred CCCCCC---C-----CCccc----------------c--------------cccccccH---H-----------------
Q 011049 379 YNKTLT---P-----FGFQT----------------E--------------FRTLWEAT---N----------------- 400 (494)
Q Consensus 379 ~~~~~~---~-----~~~~~----------------~--------------~~~~~~~~---~----------------- 400 (494)
...... . ..... . ........ .
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (293)
T d1ehya_ 133 QPDFGPVYFGLGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFN 212 (293)
T ss_dssp CTTC-----------CCHHHHHTTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHH
T ss_pred CccccchhhhhhhhhhhhhhhhhccchhhhhhccchhHHHHHHHHhhhhcccccccccHHHHHhhhhccccchhhhhhhh
Confidence 321000 0 00000 0 00000000 0
Q ss_pred HHHh-cCc------cccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHH
Q 011049 401 VYIE-MSP------ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIW 473 (494)
Q Consensus 401 ~~~~-~sp------~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~ 473 (494)
.|.. ..+ .....++++|+|+++|++|..+| .....++.+.+ ..++++.+++++||.+. .+..+.+.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~i~~~gH~~~-~e~Pe~~~~ 286 (293)
T d1ehya_ 213 YYRANIRPDAALWTDLDHTMSDLPVTMIWGLGDTCVP--YAPLIEFVPKY---YSNYTMETIEDCGHFLM-VEKPEIAID 286 (293)
T ss_dssp HHHHHSSSSCCCCCTGGGSCBCSCEEEEEECCSSCCT--THHHHHHHHHH---BSSEEEEEETTCCSCHH-HHCHHHHHH
T ss_pred hhhhccccchhhhhhhhhhccCCceEEEEeCCCCCcC--HHHHHHHHHHh---CCCCEEEEECCCCCchH-HHCHHHHHH
Confidence 0000 000 01123467899999999999987 66655544433 34689999999999765 366677777
Q ss_pred HHHHHH
Q 011049 474 ETDRWL 479 (494)
Q Consensus 474 ~~~~fl 479 (494)
.|.+||
T Consensus 287 ~I~~Ff 292 (293)
T d1ehya_ 287 RIKTAF 292 (293)
T ss_dssp HHHHHC
T ss_pred HHHHhh
Confidence 888876
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=99.61 E-value=9.8e-16 Score=137.37 Aligned_cols=192 Identities=11% Similarity=0.042 Sum_probs=116.8
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 334 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~ 334 (494)
.|.||++||.+.+ ...|. .....| +.+|.|+++|.+ |+|.+...... ...|+. +.
T Consensus 11 ~~~lvllHG~~~~-----------~~~~~----~~~~~L-~~~~~vi~~D~~---G~G~S~~~~~~---~~~d~~---~~ 65 (256)
T d1m33a_ 11 NVHLVLLHGWGLN-----------AEVWR----CIDEEL-SSHFTLHLVDLP---GFGRSRGFGAL---SLADMA---EA 65 (256)
T ss_dssp SSEEEEECCTTCC-----------GGGGG----GTHHHH-HTTSEEEEECCT---TSTTCCSCCCC---CHHHHH---HH
T ss_pred CCeEEEECCCCCC-----------HHHHH----HHHHHH-hCCCEEEEEeCC---CCCCccccccc---cccccc---cc
Confidence 3667889996521 12232 233444 578999996654 56655433211 122322 22
Q ss_pred HHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC-CCC-Ccccc---------------------
Q 011049 335 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL-TPF-GFQTE--------------------- 391 (494)
Q Consensus 335 l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~-~~~-~~~~~--------------------- 391 (494)
+.... .+++.++|||+||.+++.++.++|++++.++.+.+...... ..+ .....
T Consensus 66 ~~~~~---~~~~~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (256)
T d1m33a_ 66 VLQQA---PDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFL 142 (256)
T ss_dssp HHTTS---CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccc---ccceeeeecccchHHHHHHHHhCCcccceeeeeecccccccchhhhhhHHHHHHHHHhhhhhhhHHHHHHHh
Confidence 33332 36799999999999999999999999999887764321100 000 00000
Q ss_pred ---ccccc------------------cc-------HHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHH
Q 011049 392 ---FRTLW------------------EA-------TNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDAL 443 (494)
Q Consensus 392 ---~~~~~------------------~~-------~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l 443 (494)
..... .. ...+...+....+.++++|+|+++|++|..+| .+.+.++.+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p--~~~~~~l~~~- 219 (256)
T d1m33a_ 143 ALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVP--RKVVPMLDKL- 219 (256)
T ss_dssp HTTSTTSTTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSC--GGGCC-CTTT-
T ss_pred hhhhccccchhhHHHHHHHhhhhcchhhHHHHHhhhhhhcccchHHHHHhccCCccccccccCCCCC--HHHHHHHHHH-
Confidence 00000 00 01122233445567889999999999999987 6665544433
Q ss_pred HhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 444 KGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 444 ~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
-.++++.+++++||.+. .++.+.+.+.+.+|+++
T Consensus 220 ---~~~~~~~~i~~~gH~~~-~e~p~~~~~~l~~fl~~ 253 (256)
T d1m33a_ 220 ---WPHSESYIFAKAAHAPF-ISHPAEFCHLLVALKQR 253 (256)
T ss_dssp ---CTTCEEEEETTCCSCHH-HHSHHHHHHHHHHHHTT
T ss_pred ---CCCCEEEEECCCCCchH-HHCHHHHHHHHHHHHHH
Confidence 34578999999999765 46677888888898865
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.59 E-value=1.6e-14 Score=130.47 Aligned_cols=180 Identities=14% Similarity=0.122 Sum_probs=115.6
Q ss_pred eeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCC
Q 011049 19 IIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP 98 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~ 98 (494)
+||++|. +|..+++||.+......|+|||||++|||++.+.. ...+|+++.+++ ..++++.....+ ..+
T Consensus 20 ~l~i~d~---dG~~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~-----~~~ 88 (269)
T d2hqsa1 20 ELRVSDY---DGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESG-RSALVIQTLANG--AVRQVASFPRHN-----GAP 88 (269)
T ss_dssp EEEEEET---TSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTS-SCEEEEEETTTC--CEEEEECCSSCE-----EEE
T ss_pred EEEEEcC---CCCCcEEEecCCCceeeeEECCCCCEEEEEEeecc-CcceeeeecccC--ceeEEeeeeccc-----ccc
Confidence 7999999 99999999999888889999999999999987665 778999999988 778888766544 223
Q ss_pred ceeeCCCCCEEEEEEeccCccc---------------------eEEEEccCCC-----CCCCCCCceEeeecCCCceEEE
Q 011049 99 MMTRTSTGTNVIAKIKKENDEQ---------------------IYILLNGRGF-----TPEGNIPFLDLFDINTGSKERI 152 (494)
Q Consensus 99 ~~~~spDG~~i~~~~~~~~~~~---------------------~~~~~~~~g~-----~~~~~~~~l~~~d~~~g~~~~l 152 (494)
. |||||+++++......... .......++. ........++.++++++...++
T Consensus 89 ~--~spdg~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~ 166 (269)
T d2hqsa1 89 A--FSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRI 166 (269)
T ss_dssp E--ECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEEC
T ss_pred e--ecCCCCeeeEeeecCCccceeecccccccceeeeeccccccccccccccccceecccccCCceEeeeecccccceee
Confidence 3 9999999999774321100 0001111110 0011123477777777655432
Q ss_pred -----------EeeCcc-hhhh----------------heeeecc---CCCcccccccCcEEEEEEecCCCCCeEEEEEc
Q 011049 153 -----------WESNRE-KYFE----------------TAVALVF---GQGEEDINLNQLKILTSKESKTEITQYHILSW 201 (494)
Q Consensus 153 -----------~~~~~~-~~~~----------------~~~~~~s---~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~ 201 (494)
|..++. +++. ....++. .+..+.|||||++|+|.... .....||++++
T Consensus 167 ~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~p~~SPDG~~i~f~s~~-~~~~~l~~~~~ 245 (269)
T d2hqsa1 167 TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQ-GMGSVLNLVST 245 (269)
T ss_dssp CCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSEEEEEEEE-TTEEEEEEEET
T ss_pred ecccccccccccccccceeEEEeecCCceeeeEeecccccceEeecCccccceEECCCCCEEEEEEcC-CCCcEEEEEEC
Confidence 222222 0100 0001111 11226899999999887543 34567999999
Q ss_pred CCCceeEeecC
Q 011049 202 PLKKSSQITNF 212 (494)
Q Consensus 202 ~~~~~~~lt~~ 212 (494)
+++..++|+..
T Consensus 246 dg~~~~~lt~~ 256 (269)
T d2hqsa1 246 DGRFKARLPAT 256 (269)
T ss_dssp TSCCEEECCCS
T ss_pred CCCCEEEEeCC
Confidence 88887777754
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.51 E-value=4.8e-14 Score=125.72 Aligned_cols=195 Identities=14% Similarity=0.042 Sum_probs=111.2
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 334 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~ 334 (494)
.|+||++||.+. +...| ......|++.||.|+++|.+ |+|.+......... +...+...
T Consensus 16 ~P~ivllHG~~~-----------~~~~~----~~~~~~L~~~g~~vi~~Dl~---G~G~s~~~~~~~~~---~~~~~~~~ 74 (264)
T d1r3da_ 16 TPLVVLVHGLLG-----------SGADW----QPVLSHLARTQCAALTLDLP---GHGTNPERHCDNFA---EAVEMIEQ 74 (264)
T ss_dssp BCEEEEECCTTC-----------CGGGG----HHHHHHHTTSSCEEEEECCT---TCSSCC-------C---HHHHHHHH
T ss_pred CCeEEEeCCCCC-----------CHHHH----HHHHHHHHhCCCEEEEEecc---cccccccccccccc---hhhhhhhh
Confidence 689999999652 11223 23455677889999996654 56655333221111 11112222
Q ss_pred HHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcc-------------------------
Q 011049 335 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQ------------------------- 389 (494)
Q Consensus 335 l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~------------------------- 389 (494)
+.........++.++|||+||.+++.++.++|+.+..++...+............
T Consensus 75 ~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (264)
T d1r3da_ 75 TVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLS 154 (264)
T ss_dssp HHHTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred cccccccccCceeeeeecchHHHHHHHHHhCchhccccccccccCCCccccchhhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence 2223334557899999999999999999999988777765443221110000000
Q ss_pred ----cc-ccccc-cc---------------H-HHHHhc------CccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHH
Q 011049 390 ----TE-FRTLW-EA---------------T-NVYIEM------SPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFD 441 (494)
Q Consensus 390 ----~~-~~~~~-~~---------------~-~~~~~~------sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~ 441 (494)
.. ..... .. . ...... .....+..+++|+++++|++|..++ .+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~~~-------~~~~ 227 (264)
T d1r3da_ 155 DWYQQAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-------QLAE 227 (264)
T ss_dssp HHTTSGGGTTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-------HHHH
T ss_pred hhhhhhhhcccchHHHHHHHHHHhhhhhhhhHHhhhhccccccccchhhhhccCcceEEEEeCCcHHHH-------HHHh
Confidence 00 00000 00 0 000000 1122356788999999999997531 1222
Q ss_pred HHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 442 ALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 442 ~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
. ..+++++++++||... .++++.+.+.+.+||+..+
T Consensus 228 ~-----~~~~~~~i~~~gH~~~-~e~P~~~~~~i~~fl~~l~ 263 (264)
T d1r3da_ 228 S-----SGLSYSQVAQAGHNVH-HEQPQAFAKIVQAMIHSII 263 (264)
T ss_dssp H-----HCSEEEEETTCCSCHH-HHCHHHHHHHHHHHHHHHC
T ss_pred c-----CCCeEEEECCCCCchH-HHCHHHHHHHHHHHHHhcc
Confidence 1 2368899999999876 3677888899999998753
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.50 E-value=8.1e-16 Score=142.57 Aligned_cols=226 Identities=12% Similarity=0.091 Sum_probs=125.7
Q ss_pred EEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCC
Q 011049 237 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP 316 (494)
Q Consensus 237 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~ 316 (494)
+.+..+.|.+ +.+.| ||++||++++...... .++. ...+++.++++||.|+++|.+ |+|.+..
T Consensus 46 ~~v~~~~p~~-----~~~~P-vvllHG~~~~~~~w~~----~~~~----~~~~~~~~~~~Gy~V~~~D~~---G~G~S~~ 108 (318)
T d1qlwa_ 46 MYVRYQIPQR-----AKRYP-ITLIHGCCLTGMTWET----TPDG----RMGWDEYFLRKGYSTYVIDQS---GRGRSAT 108 (318)
T ss_dssp EEEEEEEETT-----CCSSC-EEEECCTTCCGGGGSS----CTTS----CCCHHHHHHHTTCCEEEEECT---TSTTSCC
T ss_pred EEEEEECCCC-----CCCCc-EEEECCCCCCcCcccc----Cccc----chhHHHHHHhCCCEEEEecCC---CCCCCCC
Confidence 5555666764 12367 5668998854322111 1111 123567889999999997765 4555533
Q ss_pred Cchh--HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCce-eEEEeCCCCCCCC--CCCCCcc--
Q 011049 317 NDRF--VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLF-CCGIARSGSYNKT--LTPFGFQ-- 389 (494)
Q Consensus 317 ~~~~--~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~-~a~v~~~~~~~~~--~~~~~~~-- 389 (494)
.... ......++.+. +..-.....++.+.|||+||.++..++...+... ...+..++..... .......
T Consensus 109 ~~~~~~~~~~~~~~~~~----l~~~~~~~~~~~~~g~s~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (318)
T d1qlwa_ 109 DISAINAVKLGKAPASS----LPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVA 184 (318)
T ss_dssp CCHHHHHHHTTSSCGGG----SCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHH
T ss_pred ccccCCHHHHHHHHHHH----HHHHhhcccccccccccchhHHHHHHhhhcCccccceeeEeccccccccchhhhhhhHH
Confidence 3211 11111111111 1111122356778899999988777665543221 1111111111000 0000000
Q ss_pred ------------------cccccccccH-------------HHHHhcCccccccCCCCCEEEEecCCCCCCCCC---HHH
Q 011049 390 ------------------TEFRTLWEAT-------------NVYIEMSPITHANKIKKPILIIHGEVDDKVGLF---PMQ 435 (494)
Q Consensus 390 ------------------~~~~~~~~~~-------------~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~---~~~ 435 (494)
......|... +.+....+......+++|+|+++|++|.++|.. ..+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~G~~D~~~p~~~~~~~~ 264 (318)
T d1qlwa_ 185 NLSKLAIKLDGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKA 264 (318)
T ss_dssp HHHHHHHHHTSEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCCCCGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHH
T ss_pred HHHHHHhhhccccchhhhcccchhhhhhhhhhhHHHHHHhhhcccccchhhhhhhccCCEEEEecCcCcccChhhhHHHH
Confidence 0000000000 001112455667778899999999999998610 234
Q ss_pred HHHHHHHHHhCCCcEEEEEcCC-----CCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 436 AERFFDALKGHGALSRLVLLPF-----EHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 436 ~~~~~~~l~~~g~~~~~~~~~~-----~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
+..+++.|+++|.+++++.+|+ .+|.+....+.+++.+.+.+||+++-
T Consensus 265 ~~~~~~~l~~~g~~~~~~~lp~~gi~G~gH~~~~e~~~~~va~~i~~wL~~~~ 317 (318)
T d1qlwa_ 265 CHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNT 317 (318)
T ss_dssp HHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCcEEEEecccccCCCcCccccCcCHHHHHHHHHHHHHhcc
Confidence 5678899999999999999874 56998766667889999999999874
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.50 E-value=6.6e-13 Score=120.67 Aligned_cols=211 Identities=10% Similarity=-0.060 Sum_probs=119.7
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 308 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 308 (494)
|...+|.++++... + + .|.||++||.+.+ ...|... ... .+.+|.|+++|.+
T Consensus 12 fi~~~g~~i~y~~~---G-----~--g~~vvllHG~~~~-----------~~~~~~~----~~~-L~~~~~vi~~Dl~-- 63 (298)
T d1mj5a_ 12 FIEIKGRRMAYIDE---G-----T--GDPILFQHGNPTS-----------SYLWRNI----MPH-CAGLGRLIACDLI-- 63 (298)
T ss_dssp EEEETTEEEEEEEE---S-----C--SSEEEEECCTTCC-----------GGGGTTT----GGG-GTTSSEEEEECCT--
T ss_pred EEEECCEEEEEEEE---c-----C--CCcEEEECCCCCC-----------HHHHHHH----HHH-HhcCCEEEEEeCC--
Confidence 33348888886543 1 1 4778999997522 1224322 223 3567899996655
Q ss_pred CCCCCCCCC------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCC
Q 011049 309 IGEGDKLPN------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT 382 (494)
Q Consensus 309 ~g~g~~~~~------~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~ 382 (494)
|+|.+... .........+ .+..+.+.. ..+++.++|||+||.+++.++.++|+++++++...+.....
T Consensus 64 -G~G~S~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~ 137 (298)
T d1mj5a_ 64 -GMGDSDKLDPSGPERYAYAEHRDY---LDALWEALD--LGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPI 137 (298)
T ss_dssp -TSTTSCCCSSCSTTSSCHHHHHHH---HHHHHHHTT--CTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCB
T ss_pred -CCCCCCCCccccccccccchhhhh---hcccccccc--ccccCeEEEecccchhHHHHHHHHHhhhheeeccccccccc
Confidence 45544321 1111222222 222233332 34689999999999999999999999999998876543211
Q ss_pred CCC-CCccc-----------------------------ccccc----------------cccHHHH--------------
Q 011049 383 LTP-FGFQT-----------------------------EFRTL----------------WEATNVY-------------- 402 (494)
Q Consensus 383 ~~~-~~~~~-----------------------------~~~~~----------------~~~~~~~-------------- 402 (494)
... +.... ..... .......
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (298)
T d1mj5a_ 138 EWADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPA 217 (298)
T ss_dssp CGGGSCGGGHHHHHHHHSTTHHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSH
T ss_pred cchhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhccccccccchhhhhhhhhhhhccchhhhhhhhhhhhhhhhcchhh
Confidence 000 00000 00000 0000000
Q ss_pred ----HhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHH
Q 011049 403 ----IEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRW 478 (494)
Q Consensus 403 ----~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f 478 (494)
........+.++++|+|+++|++|...+ ....+ +.+.-...++++. ++||.+. .+..+.+.+.+.+|
T Consensus 218 ~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~---~~~~~----~~~~~p~~~~~~~-~~GH~~~-~e~P~~v~~~i~~f 288 (298)
T d1mj5a_ 218 DVVAIARDYAGWLSESPIPKLFINAEPGALTT---GRMRD----FCRTWPNQTEITV-AGAHFIQ-EDSPDEIGAAIAAF 288 (298)
T ss_dssp HHHHHHHHHHHHHTTCCSCEEEEEEEECSSSS---HHHHH----HHTTCSSEEEEEE-EESSCGG-GTCHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhhhhcceeEEEEecCCCCcCh---HHHHH----HHHHCCCCEEEEe-CCCCchH-HhCHHHHHHHHHHH
Confidence 0000112245678999999999998764 33333 3333334555555 5699876 46788899999999
Q ss_pred HHHh
Q 011049 479 LQKY 482 (494)
Q Consensus 479 l~~~ 482 (494)
|++.
T Consensus 289 l~~~ 292 (298)
T d1mj5a_ 289 VRRL 292 (298)
T ss_dssp HHHH
T ss_pred Hhhh
Confidence 9886
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=99.44 E-value=8.2e-14 Score=126.56 Aligned_cols=144 Identities=18% Similarity=0.219 Sum_probs=96.1
Q ss_pred CCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeC-CCC-CCCCCCCCCccc-------ccccccccHHHHHhcCcccc
Q 011049 340 VADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIAR-SGS-YNKTLTPFGFQT-------EFRTLWEATNVYIEMSPITH 410 (494)
Q Consensus 340 ~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~-~~~-~~~~~~~~~~~~-------~~~~~~~~~~~~~~~sp~~~ 410 (494)
.+|++||+|+|+|+||+||+.++..+|++|++++++ ++. +.... ...... ....++...+.+...++...
T Consensus 7 ~iDp~rI~V~G~SsGG~mA~~la~a~sd~f~aga~vvAg~p~~ca~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 85 (318)
T d2d81a1 7 NVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCAR-NQYYTSCMYNGYPSITTPTANMKSWSGNQIASV 85 (318)
T ss_dssp CEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTS-SSCGGGGSTTCCCCCHHHHHHHHHHBTTTBCCG
T ss_pred CCCccceEEEEECHHHHHHHHHHHhcccceeeeEEEeccCchhhhc-ccchHHHhhcCCCCCcChhHHHHHHhhcCCcch
Confidence 489999999999999999999999999999755433 332 11100 000000 00111122233333344444
Q ss_pred ccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC--CcEEEEEcCCCCCccCCccc------------------HHH
Q 011049 411 ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG--ALSRLVLLPFEHHVYAAREN------------------VMH 470 (494)
Q Consensus 411 ~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~H~~~~~~~------------------~~~ 470 (494)
....+.|+||+||++|.+|| +.++++++++|++.+ .+++++.+++++|.|..... -.+
T Consensus 86 ~~~~~~pvll~hG~~D~~Vp--p~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT~~~g~g~~~c~~~~~pyi~~C~~d 163 (318)
T d2d81a1 86 ANLGQRKIYMWTGSSDTTVG--PNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISNCNYD 163 (318)
T ss_dssp GGGGGCEEEEEEETTCCSSC--HHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCTTCEEECSSC
T ss_pred hccCCCCEEEEecCCCCCcC--HHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCCCCCCCcccccccccCChhhhcCCCc
Confidence 44456899999999999998 999999999999874 46899999999999732100 013
Q ss_pred HHHHHHHHHHHhcCCC
Q 011049 471 VIWETDRWLQKYCLSN 486 (494)
Q Consensus 471 ~~~~~~~fl~~~l~~~ 486 (494)
...++++||-.-|+..
T Consensus 164 ~a~~iL~~~yg~~~~~ 179 (318)
T d2d81a1 164 GAGAALKWIYGSLNAR 179 (318)
T ss_dssp HHHHHHHHHHSSCCCC
T ss_pred HHHHHHHHHhcccCcc
Confidence 4478888888777653
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.31 E-value=1.1e-11 Score=110.51 Aligned_cols=81 Identities=14% Similarity=-0.013 Sum_probs=54.8
Q ss_pred hHHHHHh--CCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCC
Q 011049 289 SSLIFLA--RRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP 366 (494)
Q Consensus 289 ~~~~l~~--~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p 366 (494)
....|.+ .||.|+++| ..|+|.+.....+ ..+++...+..+.+.. . +++.++|||+||.+++.+|.++|
T Consensus 21 ~~~~l~~~~~~~~v~~~d---~~G~g~S~~~~~~---~~~~~~~~l~~~l~~l--~-~~~~lvGhS~GG~ia~~~a~~~p 91 (268)
T d1pjaa_ 21 LLEYINETHPGTVVTVLD---LFDGRESLRPLWE---QVQGFREAVVPIMAKA--P-QGVHLICYSQGGLVCRALLSVMD 91 (268)
T ss_dssp HHHHHHHHSTTCCEEECC---SSCSGGGGSCHHH---HHHHHHHHHHHHHHHC--T-TCEEEEEETHHHHHHHHHHHHCT
T ss_pred HHHHHHhhCCCeEEEEeC---CCCCCCCCCcccc---CHHHHHHHHHHHHhcc--C-CeEEEEccccHHHHHHHHHHHCC
Confidence 4445665 489999944 4567766544322 2333333333333332 2 78999999999999999999999
Q ss_pred C-ceeEEEeCCCC
Q 011049 367 H-LFCCGIARSGS 378 (494)
Q Consensus 367 ~-~~~a~v~~~~~ 378 (494)
+ +++.+|..++.
T Consensus 92 ~~~v~~lvl~~~~ 104 (268)
T d1pjaa_ 92 DHNVDSFISLSSP 104 (268)
T ss_dssp TCCEEEEEEESCC
T ss_pred ccccceEEEECCC
Confidence 8 68988887763
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.26 E-value=1.4e-10 Score=112.30 Aligned_cols=183 Identities=8% Similarity=0.000 Sum_probs=112.3
Q ss_pred CCCCCccceeeeccCCCCCCCCCeecccccc---ccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecc
Q 011049 11 NVEVSPRDIIYTQPAEPAEGEKPEILHKLDL---RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV 87 (494)
Q Consensus 11 ~~~~~~~~~i~~~~~~~~~~~~~~~lt~~~~---~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~ 87 (494)
.+..++.+.+|+.|+ ..++.++|+.... ....|.|||||+.|||++ +.+||+++..++ +..++|...
T Consensus 84 ~~r~s~~~~~~i~d~---~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-----~~nl~~~~~~~~--~~~~lt~~g 153 (465)
T d1xfda1 84 IYQHSYTGYYVLSKI---PHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-----ENNIYYCAHVGK--QAIRVVSTG 153 (465)
T ss_dssp CSSSCCCSEEEEEES---SSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-----TTEEEEESSSSS--CCEEEECCC
T ss_pred eeEeeccccEEEEEc---cCCceeeccCccCCccccceeeeccCCceEEEEe-----cceEEEEecCCC--ceEEEeccc
Confidence 345577889999999 8888888876543 334599999999999985 568999999887 778887654
Q ss_pred ccc-cc-----------CCCCCCceeeCCCCCEEEEEEeccCccc---------------eEEEEccCCCCCCCCCCceE
Q 011049 88 FEN-VY-----------SDPGSPMMTRTSTGTNVIAKIKKENDEQ---------------IYILLNGRGFTPEGNIPFLD 140 (494)
Q Consensus 88 ~~~-~~-----------~~~~~~~~~~spDG~~i~~~~~~~~~~~---------------~~~~~~~~g~~~~~~~~~l~ 140 (494)
... .+ ..-....+.|||||++|||......... ..+.|...|.. .....|+
T Consensus 154 ~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~--np~~~l~ 231 (465)
T d1xfda1 154 KEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSE--NPSISLH 231 (465)
T ss_dssp BTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSC--CCEEEEE
T ss_pred CcceeeccccchhhhhhhccccceEEECCCCCeEEEEEecccccceeecccccccccceeeeeeccccCCC--CCceeEE
Confidence 321 00 0011234559999999999864322111 12222222221 1123588
Q ss_pred eeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEee
Q 011049 141 LFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQIT 210 (494)
Q Consensus 141 ~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt 210 (494)
++|++++..+........... ....+ ....|++|++.+++.......-..+++++..+++.+.+.
T Consensus 232 v~d~~~~~~~~~~~~~~~~~~-~~~y~----~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~ 296 (465)
T d1xfda1 232 VIGLNGPTHDLEMMPPDDPRM-REYYI----TMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKH 296 (465)
T ss_dssp EEESSSSCCCEECCCCCCGGG-SSEEE----EEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEE
T ss_pred EEecCCCcEEEEEeccCcCcc-cccee----eeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEE
Confidence 899988765544333221000 00000 123688888655554444445557899999988877664
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.22 E-value=6.3e-11 Score=112.66 Aligned_cols=117 Identities=9% Similarity=-0.093 Sum_probs=78.3
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCC------eEEEeCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR------FAVLAGPS 305 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G------~~v~~~~~ 305 (494)
.||.+|+..-....+ ...|.||++||.|.+. ..| ......|++.| |.|++++-
T Consensus 89 i~G~~iHf~h~~~~~------~~~~pLlLlHG~P~s~-----------~~w----~~vi~~La~~g~~~~~~f~VIaPDL 147 (394)
T d1qo7a_ 89 IEGLTIHFAALFSER------EDAVPIALLHGWPGSF-----------VEF----YPILQLFREEYTPETLPFHLVVPSL 147 (394)
T ss_dssp ETTEEEEEEEECCSC------TTCEEEEEECCSSCCG-----------GGG----HHHHHHHHHHCCTTTCCEEEEEECC
T ss_pred ECCEEEEEEEEeccC------CCCCEEEEeccccccH-----------HHH----HHHHHhhccccCCcccceeeecccc
Confidence 489999987775543 1257888999976321 122 23455778887 99999555
Q ss_pred CCCCCCCCCCCC----chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC
Q 011049 306 IPIIGEGDKLPN----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 306 ~~~~g~g~~~~~----~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 378 (494)
.|+|.+... .........|+...++.+ + .++..++|||+||.++..++..+|+.+++++.....
T Consensus 148 ---pG~G~S~~P~~~~~y~~~~~a~~~~~l~~~l---g---~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~ 215 (394)
T d1qo7a_ 148 ---PGYTFSSGPPLDKDFGLMDNARVVDQLMKDL---G---FGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCA 215 (394)
T ss_dssp ---TTSTTSCCCCSSSCCCHHHHHHHHHHHHHHT---T---CTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred ---cccCCCCCCCCCCccCHHHHHHHHHHHHhhc---c---CcceEEEEecCchhHHHHHHHHhhccccceeEeeec
Confidence 466666432 112344455544444332 3 367889999999999999999999988888776543
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.21 E-value=7.9e-11 Score=98.53 Aligned_cols=152 Identities=13% Similarity=-0.031 Sum_probs=93.8
Q ss_pred hhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC--
Q 011049 288 TSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-- 365 (494)
Q Consensus 288 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~-- 365 (494)
.....|.++||.++..+.+ +++...... ....+++...++.+.++. ..+++.++||||||.++..++.++
T Consensus 20 ~l~~~l~~~g~~~~~~~~~---~~~~~~~~~---~~~~~~l~~~i~~~~~~~--~~~~v~lvGHSmGG~va~~~~~~~~~ 91 (179)
T d1ispa_ 20 GIKSYLVSQGWSRDKLYAV---DFWDKTGTN---YNNGPVLSRFVQKVLDET--GAKKVDIVAHSMGGANTLYYIKNLDG 91 (179)
T ss_dssp HHHHHHHHTTCCGGGEEEC---CCSCTTCCH---HHHHHHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHHSSG
T ss_pred HHHHHHHHcCCeEEEEecC---Ccccccccc---chhhhhHHHHHHHHHHhc--CCceEEEEeecCcCHHHHHHHHHcCC
Confidence 3556788999987653333 333322221 223445555566555542 246899999999999999999877
Q ss_pred CCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 011049 366 PHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG 445 (494)
Q Consensus 366 p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~ 445 (494)
|++++.+|++++...... . . ...........|++.++|..|..|+ +..+. +
T Consensus 92 ~~~V~~~V~l~~p~~g~~--~-----~-------------~l~~~~~~~~~~~~~i~~~~D~~v~--~~~~~-----l-- 142 (179)
T d1ispa_ 92 GNKVANVVTLGGANRLTT--G-----K-------------ALPGTDPNQKILYTSIYSSADMIVM--NYLSR-----L-- 142 (179)
T ss_dssp GGTEEEEEEESCCGGGTC--S-----B-------------CCCCSCTTCCCEEEEEEETTCSSSC--HHHHC-----C--
T ss_pred chhhCEEEEECCCCCCch--h-----h-------------hcCCcccccCceEEEEEecCCcccC--chhhc-----C--
Confidence 578999998877432100 0 0 0000112235899999999999997 65431 1
Q ss_pred CCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 446 HGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 446 ~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
...+.+.+++.+|.... .+. ...+.+.+||+
T Consensus 143 --~~~~~~~~~~~~H~~l~-~~~-~v~~~i~~~L~ 173 (179)
T d1ispa_ 143 --DGARNVQIHGVGHIGLL-YSS-QVNSLIKEGLN 173 (179)
T ss_dssp --BTSEEEEESSCCTGGGG-GCH-HHHHHHHHHHT
T ss_pred --CCceEEEECCCCchhhc-cCH-HHHHHHHHHHh
Confidence 12356778999996432 222 56666777765
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.18 E-value=5.5e-10 Score=102.62 Aligned_cols=179 Identities=13% Similarity=0.148 Sum_probs=111.5
Q ss_pred CCeEEEeCCCCCCCCCCCCCC-----------CchhHHHHHHHHHHHHHHHHHcCCCCCCcE-EEEecChHHHHHHHHHH
Q 011049 296 RRFAVLAGPSIPIIGEGDKLP-----------NDRFVEQLVSSAEAAVEEVVRRGVADPSRI-AVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 296 ~G~~v~~~~~~~~~g~g~~~~-----------~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri-~i~G~S~GG~~a~~~~~ 363 (494)
.-|-|+++|..|. ++|.+.+ +..+..-.+.|+.++-..|+++-.| +|+ +|+|.||||+.|+..+.
T Consensus 77 ~kyfVI~~n~lG~-~~gSs~p~s~~p~tg~~~g~~FP~iti~D~v~aq~~Ll~~LGI--~~l~~viG~SmGGmqAl~wa~ 153 (357)
T d2b61a1 77 DRYFFISSNVLGG-CKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGI--SHLKAIIGGSFGGMQANQWAI 153 (357)
T ss_dssp TTCEEEEECCTTC-SSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTC--CCEEEEEEETHHHHHHHHHHH
T ss_pred CceEEEEecccCC-ccccCCcCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhCc--ceEEEEecccHHHHHHHHHHH
Confidence 4588888777654 2222211 1122222355666666666654334 566 88899999999999999
Q ss_pred hCCCceeEEEeCCCCCCCC----------------CCCCC---cc-------------------------------ccc-
Q 011049 364 HAPHLFCCGIARSGSYNKT----------------LTPFG---FQ-------------------------------TEF- 392 (494)
Q Consensus 364 ~~p~~~~a~v~~~~~~~~~----------------~~~~~---~~-------------------------------~~~- 392 (494)
.+|++++.+|++++..... ...|. +. ...
T Consensus 154 ~~Pd~v~~~i~i~~~a~~s~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~ 233 (357)
T d2b61a1 154 DYPDFMDNIVNLCSSIYFSAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATK 233 (357)
T ss_dssp HSTTSEEEEEEESCCSSCCHHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBC
T ss_pred hhhHHHhhhcccccccccchhHHHHHHHHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccc
Confidence 9999999999887642100 00000 00 000
Q ss_pred --ccccc---cHHH------------------------HHhcCcc-------ccccCCCCCEEEEecCCCCCCCCCHHHH
Q 011049 393 --RTLWE---ATNV------------------------YIEMSPI-------THANKIKKPILIIHGEVDDKVGLFPMQA 436 (494)
Q Consensus 393 --~~~~~---~~~~------------------------~~~~sp~-------~~~~~~~~P~li~~G~~D~~v~~~~~~~ 436 (494)
...|. ..+. +...++. ..+++|++|+|++..+.|...| +++.
T Consensus 234 ~~~~~~~~~~~vesyL~~~g~kf~~rfDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFp--p~~~ 311 (357)
T d2b61a1 234 SDGSFWGDYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFK--PIDL 311 (357)
T ss_dssp TTCCTTSCCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSC--HHHH
T ss_pred cccccccchhhHHHHHHHHHHHHHhhCCHHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccC--HHHH
Confidence 00000 0011 1112221 1267899999999999999998 9999
Q ss_pred HHHHHHHHhCCCcEEEEEcCCC-CCccCCcccHHHHHHHHHHHHH
Q 011049 437 ERFFDALKGHGALSRLVLLPFE-HHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 437 ~~~~~~l~~~g~~~~~~~~~~~-~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
+++++.|.+.++++++++++.. ||.-+. .+...+...+.+||.
T Consensus 312 ~~~a~~l~~~~~~v~~~~I~S~~GHdafL-~e~~~~~~~I~~fL~ 355 (357)
T d2b61a1 312 YKSKQLLEQSGVDLHFYEFPSDYGHDAFL-VDYDQFEKRIRDGLA 355 (357)
T ss_dssp HHHHHHHHHTTCEEEEEEECCTTGGGHHH-HCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCeEEEEECCCCCccccC-cCHHHHHHHHHHHHc
Confidence 9999999999999999999864 885332 223455556667765
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.15 E-value=1.3e-09 Score=100.20 Aligned_cols=179 Identities=16% Similarity=0.127 Sum_probs=111.6
Q ss_pred CCeEEEeCCCCCCCCCCCCCC-----------CchhHHHHHHHHHHHHHHHHHcCCCCCCcE-EEEecChHHHHHHHHHH
Q 011049 296 RRFAVLAGPSIPIIGEGDKLP-----------NDRFVEQLVSSAEAAVEEVVRRGVADPSRI-AVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 296 ~G~~v~~~~~~~~~g~g~~~~-----------~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri-~i~G~S~GG~~a~~~~~ 363 (494)
.-|-|+++|..|. |+|.+.. +..+..-.+.|+.++-.-|.+.-.| +|+ +|+|+||||+.|+..|.
T Consensus 84 ~~yfVI~~n~lG~-~~~ss~~~s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI--~~l~~viG~SmGGmqAl~wA~ 160 (362)
T d2pl5a1 84 NQYFIICSNVIGG-CKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGI--EKLFCVAGGSMGGMQALEWSI 160 (362)
T ss_dssp TTCEEEEECCTTC-SSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTC--SSEEEEEEETHHHHHHHHHHH
T ss_pred cccEEEeeccccC-cccccCccccccccccccCcCCccchhHHHHHHHHHHHHHhCc--CeeEEEeehhHHHHHHHHHHH
Confidence 4578888777653 3332211 1112122355666666666665334 344 58899999999999999
Q ss_pred hCCCceeEEEeCCCCCCCC----------------CCCC--C-c--------------------cc------cc-c----
Q 011049 364 HAPHLFCCGIARSGSYNKT----------------LTPF--G-F--------------------QT------EF-R---- 393 (494)
Q Consensus 364 ~~p~~~~a~v~~~~~~~~~----------------~~~~--~-~--------------------~~------~~-~---- 393 (494)
.+|+.++.+|++++..... ...| + + .. .. +
T Consensus 161 ~yPd~v~~~v~ia~sa~~s~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~ 240 (362)
T d2pl5a1 161 AYPNSLSNCIVMASTAEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPR 240 (362)
T ss_dssp HSTTSEEEEEEESCCSBCCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCS
T ss_pred hCchHhhhhcccccccccCHHHHHHHHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhcccccc
Confidence 9999999999988642200 0000 0 0 00 00 0
Q ss_pred -----cc-----c-----------ccH-------HHHHhcCcc------ccccCCCCCEEEEecCCCCCCCCCHHHHHHH
Q 011049 394 -----TL-----W-----------EAT-------NVYIEMSPI------THANKIKKPILIIHGEVDDKVGLFPMQAERF 439 (494)
Q Consensus 394 -----~~-----~-----------~~~-------~~~~~~sp~------~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~ 439 (494)
.. | -++ ..+...++. ..+++|+.|+|++..+.|...| +++.+++
T Consensus 241 ~~~~~~~~~ve~yl~~~g~k~~~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFp--p~~~~~~ 318 (362)
T d2pl5a1 241 GNILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYP--PAQSREI 318 (362)
T ss_dssp SCTTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSC--HHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHHHhcCCHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcC--HHHHHHH
Confidence 00 0 000 111112221 1267899999999999999998 9999999
Q ss_pred HHHHHhCCCcEEEEEcC-CCCCccCCcccHHHHHHHHHHHHH
Q 011049 440 FDALKGHGALSRLVLLP-FEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 440 ~~~l~~~g~~~~~~~~~-~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
++.|.+.++++++++++ ..||.-+. .....+.+.+.+||+
T Consensus 319 a~~l~~a~~~v~~~eI~S~~GHdaFL-~e~~~~~~~I~~FL~ 359 (362)
T d2pl5a1 319 VKSLEAADKRVFYVELQSGEGHDSFL-LKNPKQIEILKGFLE 359 (362)
T ss_dssp HHHHHHTTCCEEEEEECCCBSSGGGG-SCCHHHHHHHHHHHH
T ss_pred HHHHHhCCCCeEEEEeCCCCCcchhc-cCHHHHHHHHHHHHc
Confidence 99999999999998776 56886432 223456667777775
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.13 E-value=7.5e-11 Score=106.23 Aligned_cols=128 Identities=9% Similarity=-0.022 Sum_probs=87.8
Q ss_pred ceecCC--CceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEE
Q 011049 46 VSWCDD--SLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYI 123 (494)
Q Consensus 46 p~wspD--g~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~ 123 (494)
...||| |+.|+|++ ..+||+++++++ ++++||..++.. ..|. |||||++|+|.....
T Consensus 4 ~~~sPdi~G~~v~f~~-----~~dl~~~d~~~g--~~~~Lt~~~~~~-----~~p~--~SPDG~~iaf~~~~~------- 62 (281)
T d1k32a2 4 LLLNPDIHGDRIIFVC-----CDDLWEHDLKSG--STRKIVSNLGVI-----NNAR--FFPDGRKIAIRVMRG------- 62 (281)
T ss_dssp CCEEEEEETTEEEEEE-----TTEEEEEETTTC--CEEEEECSSSEE-----EEEE--ECTTSSEEEEEEEES-------
T ss_pred cccCCCCCCCEEEEEe-----CCcEEEEECCCC--CEEEEecCCCcc-----cCEE--ECCCCCEEEEEEeeC-------
Confidence 357999 99999985 357999999998 889999887665 4565 999999999987431
Q ss_pred EEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCC--CeEEEEEc
Q 011049 124 LLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEI--TQYHILSW 201 (494)
Q Consensus 124 ~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p--~~l~~~~~ 201 (494)
+ .....+|+++++.+|+.++|+...+.. . ..........|+|||+.++++....... ..++.++.
T Consensus 63 -----~---~~~~~~i~~~~~~~g~~~~lt~~~~~~-~----~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 129 (281)
T d1k32a2 63 -----S---SLNTADLYFYNGENGEIKRITYFSGKS-T----GRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVEN 129 (281)
T ss_dssp -----T---TCCEEEEEEEETTTTEEEECCCCCEEE-E----TTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEG
T ss_pred -----C---CCCceEEEEEEecCCceEEeeecCCCc-c----CccccccccccCCCCCEEEEEEccCCCccceeeeeecC
Confidence 1 112345999999999998887654320 0 0000112347999999998876543322 24666666
Q ss_pred CCCcee
Q 011049 202 PLKKSS 207 (494)
Q Consensus 202 ~~~~~~ 207 (494)
+++..+
T Consensus 130 ~~~~~~ 135 (281)
T d1k32a2 130 DGINFV 135 (281)
T ss_dssp GGTEEE
T ss_pred CCceeE
Confidence 555443
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.03 E-value=2.1e-09 Score=99.92 Aligned_cols=149 Identities=15% Similarity=0.004 Sum_probs=104.6
Q ss_pred CccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
..+|+||++++ ++++.+++++. .....++|||||+.|++.+.+++ ..|++.+++++ +.++++......
T Consensus 21 ~~~g~v~v~d~---~~~~~~~~~~~-~~v~~~~~spDg~~l~~~~~~~g--~~v~v~d~~~~--~~~~~~~~~~~v---- 88 (360)
T d1k32a3 21 VSRGQAFIQDV---SGTYVLKVPEP-LRIRYVRRGGDTKVAFIHGTREG--DFLGIYDYRTG--KAEKFEENLGNV---- 88 (360)
T ss_dssp EETTEEEEECT---TSSBEEECSCC-SCEEEEEECSSSEEEEEEEETTE--EEEEEEETTTC--CEEECCCCCCSE----
T ss_pred EECCeEEEEEC---CCCcEEEccCC-CCEEEEEECCCCCEEEEEEcCCC--CEEEEEECCCC--cEEEeeCCCceE----
Confidence 45789999999 88888888654 56678999999999999876543 46899999987 777766544332
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcc
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEE 174 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~ 174 (494)
..+.|||||++|++... .. .++.+++++++...+...... .....
T Consensus 89 ---~~~~~spdg~~l~~~~~-------------------~~--~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 133 (360)
T d1k32a3 89 ---FAMGVDRNGKFAVVAND-------------------RF--EIMTVDLETGKPTVIERSREA-----------MITDF 133 (360)
T ss_dssp ---EEEEECTTSSEEEEEET-------------------TS--EEEEEETTTCCEEEEEECSSS-----------CCCCE
T ss_pred ---Eeeeecccccccceecc-------------------cc--ccccccccccceeeeeecccc-----------cccch
Confidence 12449999999998752 11 388889988887666543321 01235
Q ss_pred cccccCcEEEEEEecCCC------CCeEEEEEcCCCceeEee
Q 011049 175 DINLNQLKILTSKESKTE------ITQYHILSWPLKKSSQIT 210 (494)
Q Consensus 175 ~~s~d~~~~~~~~~s~~~------p~~l~~~~~~~~~~~~lt 210 (494)
.|+|||+.+++....... -..+++++..+++...++
T Consensus 134 ~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~ 175 (360)
T d1k32a3 134 TISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT 175 (360)
T ss_dssp EECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS
T ss_pred hhccceeeeeeeccccccceeeccccceeeeccccCceeeec
Confidence 899999998886543321 235777887777665554
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=98.99 E-value=2.6e-10 Score=99.38 Aligned_cols=184 Identities=11% Similarity=0.006 Sum_probs=96.0
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 334 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~ 334 (494)
.|+||++||.+ ++...|. ..+..| .+|.|+.++.. |.+. .++++.+.++.
T Consensus 17 ~~~l~~lhg~~-----------g~~~~~~----~la~~L--~~~~v~~~~~~---g~~~----------~a~~~~~~i~~ 66 (230)
T d1jmkc_ 17 EQIIFAFPPVL-----------GYGLMYQ----NLSSRL--PSYKLCAFDFI---EEED----------RLDRYADLIQK 66 (230)
T ss_dssp SEEEEEECCTT-----------CCGGGGH----HHHHHC--TTEEEEEECCC---CSTT----------HHHHHHHHHHH
T ss_pred CCeEEEEcCCC-----------CCHHHHH----HHHHHC--CCCEEeccCcC---CHHH----------HHHHHHHHHHH
Confidence 68999999975 2222232 223333 47988885543 3321 24444444433
Q ss_pred HHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCc---eeEEEeCCCCCCCCCCC---CCccc------------cccccc
Q 011049 335 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL---FCCGIARSGSYNKTLTP---FGFQT------------EFRTLW 396 (494)
Q Consensus 335 l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~---~~a~v~~~~~~~~~~~~---~~~~~------------~~~~~~ 396 (494)
+ . ...++.|+|||+||.+++.+|.+.|++ +..++...+........ ..... ......
T Consensus 67 ~---~--~~~~~~lvGhS~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (230)
T d1jmkc_ 67 L---Q--PEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSE 141 (230)
T ss_dssp H---C--CSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHTTTCSGGGSH
T ss_pred h---C--CCCcEEEEeeccChHHHHHHHHhhhhhCccceeeecccccCccchhhhhhhhhhhhhhhhhhccccccccccH
Confidence 2 2 236799999999999999999876543 44444433321110000 00000 000000
Q ss_pred ccH--------HHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCc-cc
Q 011049 397 EAT--------NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR-EN 467 (494)
Q Consensus 397 ~~~--------~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~-~~ 467 (494)
... ..+..........++++|+++++|++|..++ ... ..+.+ ....+++++++++ +|..... +.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~l~i~g~~D~~~~--~~~-~~w~~---~~~~~~~~~~i~g-~H~~ml~~~~ 214 (230)
T d1jmkc_ 142 AVKHGLKQKTHAFYSYYVNLISTGQVKADIDLLTSGADFDIP--EWL-ASWEE---ATTGAYRMKRGFG-THAEMLQGET 214 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCC--TTE-ECSGG---GBSSCEEEEECSS-CGGGTTSHHH
T ss_pred HHHHHHHHHHHHHHHhhhcccccccccCcceeeeecCCcccc--hhH-HHHHH---hccCCcEEEEEcC-CChhhcCCcc
Confidence 000 0111111223456678999999999999876 331 11111 1224578889986 8985532 23
Q ss_pred HHHHHHHHHHHHH
Q 011049 468 VMHVIWETDRWLQ 480 (494)
Q Consensus 468 ~~~~~~~~~~fl~ 480 (494)
..+..+.|.+||+
T Consensus 215 ~~~va~~I~~~L~ 227 (230)
T d1jmkc_ 215 LDRNAGILLEFLN 227 (230)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 3444455555554
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.99 E-value=5.9e-10 Score=108.52 Aligned_cols=151 Identities=8% Similarity=-0.117 Sum_probs=95.9
Q ss_pred ccccCCCCCCCCCccceeeeccCCCCCCCCCeeccccc------cccccceecCCCceEEEEeeee-----ccceEEEEE
Q 011049 3 EAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD------LRFRSVSWCDDSLALVNETWYK-----TSQTRTWLV 71 (494)
Q Consensus 3 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lt~~~------~~~~~p~wspDg~~i~f~~~~~-----~~~~~~~~~ 71 (494)
+|++.+.. ...-.+.|+++++ .+++.+++.... .....++|||||++|+|.+... ....++|++
T Consensus 23 ~W~~d~~~--~~~~~~~~~~~~~---~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~ 97 (470)
T d2bgra1 23 RWISDHEY--LYKQENNILVFNA---EYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY 97 (470)
T ss_dssp EECSSSEE--EEESSSCEEEEET---TTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred EeCCCCEE--EEEcCCcEEEEEC---CCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEE
Confidence 46665542 2233567999999 888877665432 2346788999999999988522 125789999
Q ss_pred cCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEE
Q 011049 72 CPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKER 151 (494)
Q Consensus 72 ~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~ 151 (494)
++.++ +.+.++..+... ..+. |||||++|||... . .+++++..+|+..+
T Consensus 98 d~~~~--~~~~l~~~~~~~-----~~~~--~SPDG~~ia~~~~-------------------~---~l~~~~~~~g~~~~ 146 (470)
T d2bgra1 98 DLNKR--QLITEERIPNNT-----QWVT--WSPVGHKLAYVWN-------------------N---DIYVKIEPNLPSYR 146 (470)
T ss_dssp ETTTT--EECCSSCCCTTE-----EEEE--ECSSTTCEEEEET-------------------T---EEEEESSTTSCCEE
T ss_pred ECCCC--cccccccCCccc-----cccc--cccCcceeeEeec-------------------c---cceEEECCCCceee
Confidence 99988 666666554332 2333 9999999999752 1 37888888887666
Q ss_pred EEeeCcc-hhhhhe------eeeccCCCcccccccCcEEEEEEec
Q 011049 152 IWESNRE-KYFETA------VALVFGQGEEDINLNQLKILTSKES 189 (494)
Q Consensus 152 l~~~~~~-~~~~~~------~~~~s~~~~~~~s~d~~~~~~~~~s 189 (494)
++..... ..+... ....+......|||||+++++....
T Consensus 147 ~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d 191 (470)
T d2bgra1 147 ITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFN 191 (470)
T ss_dssp CCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEE
T ss_pred eeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEec
Confidence 5543321 000000 0001111234699999999987653
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.96 E-value=4.1e-09 Score=102.36 Aligned_cols=92 Identities=9% Similarity=-0.051 Sum_probs=69.2
Q ss_pred CCCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccc-
Q 011049 13 EVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV- 91 (494)
Q Consensus 13 ~~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~- 91 (494)
..++.+.+|++|+ ++++.++++..+.....|+|||||+.|+|.+ +.++|++++.++ +..+++.....+.
T Consensus 87 r~s~~~~~~l~d~---~~~~~~~l~~~~~~~~~~~~SPDG~~ia~~~-----~~~l~~~~~~~g--~~~~~t~~~~~~~~ 156 (470)
T d2bgra1 87 RHSYTASYDIYDL---NKRQLITEERIPNNTQWVTWSPVGHKLAYVW-----NNDIYVKIEPNL--PSYRITWTGKEDII 156 (470)
T ss_dssp SSCEEEEEEEEET---TTTEECCSSCCCTTEEEEEECSSTTCEEEEE-----TTEEEEESSTTS--CCEECCSCCBTTTE
T ss_pred eeccCceEEEEEC---CCCcccccccCCccccccccccCcceeeEee-----cccceEEECCCC--ceeeeeeccCCCcc
Confidence 3466788999999 8899999999888888999999999999974 457999999988 6677765432211
Q ss_pred c-----------CCCCCCceeeCCCCCEEEEEEe
Q 011049 92 Y-----------SDPGSPMMTRTSTGTNVIAKIK 114 (494)
Q Consensus 92 ~-----------~~~~~~~~~~spDG~~i~~~~~ 114 (494)
+ ..-....+.|||||++|+|...
T Consensus 157 ~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~ 190 (470)
T d2bgra1 157 YNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQF 190 (470)
T ss_dssp EESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEE
T ss_pred cccccceeeeeeecCCccccEECCCCCccceeEe
Confidence 0 0001123449999999999864
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.96 E-value=6.6e-10 Score=99.32 Aligned_cols=108 Identities=16% Similarity=0.132 Sum_probs=83.8
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
.+|++.++ +++...+++........|.|||||+.|+|.+..++ ...+++++..++ .. +++...+.+ ..
T Consensus 151 ~~i~~~~~---~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~-~~~i~~~~~~~~--~~-~~~~~~~~~-----~~ 218 (269)
T d2hqsa1 151 PQVYKVNI---NGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGG-QQHIAKQDLATG--GV-QVLSSTFLD-----ET 218 (269)
T ss_dssp CEEEEEET---TSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSS-CEEEEEEETTTC--CE-EECCCSSSC-----EE
T ss_pred ceEeeeec---ccccceeeecccccccccccccccceeEEEeecCC-ceeeeEeecccc--cc-eEeecCccc-----cc
Confidence 37888888 77888888888888889999999999999988766 778999998876 43 444444333 34
Q ss_pred CceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCc
Q 011049 98 PMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNR 157 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~ 157 (494)
|. |||||++|+|.+.. ....+|++++++++..++|+...+
T Consensus 219 p~--~SPDG~~i~f~s~~------------------~~~~~l~~~~~dg~~~~~lt~~~g 258 (269)
T d2hqsa1 219 PS--LAPNGTMVIYSSSQ------------------GMGSVLNLVSTDGRFKARLPATDG 258 (269)
T ss_dssp EE--ECTTSSEEEEEEEE------------------TTEEEEEEEETTSCCEEECCCSSS
T ss_pred eE--ECCCCCEEEEEEcC------------------CCCcEEEEEECCCCCEEEEeCCCC
Confidence 44 99999999998742 122359999999998888877654
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=98.95 E-value=8.8e-10 Score=99.34 Aligned_cols=173 Identities=14% Similarity=0.103 Sum_probs=94.6
Q ss_pred hCCeEEEeCCCCCCCCCCCCCCC-----chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC----
Q 011049 295 ARRFAVLAGPSIPIIGEGDKLPN-----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---- 365 (494)
Q Consensus 295 ~~G~~v~~~~~~~~~g~g~~~~~-----~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~---- 365 (494)
..++.|+..+. .|+|.+... ....+.++.++.++| .+. ....++.++|||+||.+++.+|.+.
T Consensus 86 ~~~~~V~al~~---pG~~~~~~~~~~~~~~s~~~~a~~~~~~i---~~~--~~~~P~vL~GhS~GG~vA~e~A~~l~~~~ 157 (283)
T d2h7xa1 86 QEERDFLAVPL---PGYGTGTGTGTALLPADLDTALDAQARAI---LRA--AGDAPVVLLGHSGGALLAHELAFRLERAH 157 (283)
T ss_dssp TTTCCEEEECC---TTCCBC---CBCCEESSHHHHHHHHHHHH---HHH--HTTSCEEEEEETHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEeC---CCCCCCCCCccccccCCHHHHHHHHHHHH---HHh--cCCCceEEEEeccchHHHHHHHHhhHHHc
Confidence 35678887444 344433211 123455555444433 332 1235799999999999999998764
Q ss_pred CCceeEEEeCCCCCCCCCCCCC-ccc--------ccccccccH-----HHHHhcCccccccCCCCCEEEEecCCCCCCCC
Q 011049 366 PHLFCCGIARSGSYNKTLTPFG-FQT--------EFRTLWEAT-----NVYIEMSPITHANKIKKPILIIHGEVDDKVGL 431 (494)
Q Consensus 366 p~~~~a~v~~~~~~~~~~~~~~-~~~--------~~~~~~~~~-----~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~ 431 (494)
+..+++++++.+.......... +.. ......... ..+.+.........+++|+++++|++|..++
T Consensus 158 g~~v~~LvL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~~~Pvl~i~g~~d~~~~- 236 (283)
T d2h7xa1 158 GAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLLAMGRYARFLAGPRPGRSSAPVLLVRASEPLGDW- 236 (283)
T ss_dssp SCCCSEEEEESCCCTTCCHHHHHTHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHSCCCCCCCSCEEEEEESSCSSCC-
T ss_pred CCCceEEEEecCCccccccchhhhhhhhHHHhhcccccccccHHHHHHHHHHHHHhhccccccCCCeEEEEeCCCCCCC-
Confidence 4567888877653221100000 000 000000000 0111111112345688999999999999886
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 432 FPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 432 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
......+.+. ....++++.+++ +|.....+......+.|.+||+.
T Consensus 237 -~~~~~~w~~~---~~~~~~~~~v~G-~H~~ml~e~~~~vA~~i~~~L~~ 281 (283)
T d2h7xa1 237 -QEERGDWRAH---WDLPHTVADVPG-DHFTMMRDHAPAVAEAVLSWLDA 281 (283)
T ss_dssp -CGGGCCCSCC---CSSCSEEEEESS-CTTHHHHTTHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHh---CCCCcEEEEEcC-CCcccccCCHHHHHHHHHHHHHh
Confidence 5543322221 123468888998 78644345666777889999875
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.90 E-value=1.8e-08 Score=97.27 Aligned_cols=154 Identities=8% Similarity=-0.064 Sum_probs=95.0
Q ss_pred ccccCCCCCCCCCccceeeeccCCCCCCCCCeeccccc----cccccceecCCCceEEEEeeee-----ccceEEEEEcC
Q 011049 3 EAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD----LRFRSVSWCDDSLALVNETWYK-----TSQTRTWLVCP 73 (494)
Q Consensus 3 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lt~~~----~~~~~p~wspDg~~i~f~~~~~-----~~~~~~~~~~~ 73 (494)
.|.+++..-. ....+.|+++++ .+++.+.|.... .....+.|||||++|+|..+.. .....+|++++
T Consensus 23 ~W~~~~~~~~-~~~~g~i~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~ 98 (465)
T d1xfda1 23 KWISDTEFIY-REQKGTVRLWNV---ETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKI 98 (465)
T ss_dssp CBSSSSCBCC-CCSSSCEEEBCG---GGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEES
T ss_pred EEeCCCcEEE-EeCCCcEEEEEC---CCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEc
Confidence 3555544321 234558999999 777776654332 2233567999999999976421 12568999999
Q ss_pred CCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEE
Q 011049 74 GSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIW 153 (494)
Q Consensus 74 ~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~ 153 (494)
.++ +.+.|+........ ...|. |||||++|||... . .||.++..+++..+++
T Consensus 99 ~~~--~~~~l~~~~~~~~~--l~~~~--wSPDG~~iafv~~-------------------~---nl~~~~~~~~~~~~lt 150 (465)
T d1xfda1 99 PHG--DPQSLDPPEVSNAK--LQYAG--WGPKGQQLIFIFE-------------------N---NIYYCAHVGKQAIRVV 150 (465)
T ss_dssp SSC--CCEECCCTTCCSCC--CSBCC--BCSSTTCEEEEET-------------------T---EEEEESSSSSCCEEEE
T ss_pred cCC--ceeeccCccCCccc--cceee--eccCCceEEEEec-------------------c---eEEEEecCCCceEEEe
Confidence 988 77888665433311 12244 9999999999862 1 3888888888777777
Q ss_pred eeCcc-hhhhhee------eeccCCCcccccccCcEEEEEEe
Q 011049 154 ESNRE-KYFETAV------ALVFGQGEEDINLNQLKILTSKE 188 (494)
Q Consensus 154 ~~~~~-~~~~~~~------~~~s~~~~~~~s~d~~~~~~~~~ 188 (494)
..... ..+.+.. .+.......-|||||++|+|...
T Consensus 151 ~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~ 192 (465)
T d1xfda1 151 STGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAI 192 (465)
T ss_dssp CCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEE
T ss_pred cccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEe
Confidence 64432 1110000 00011112358999999999753
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=98.88 E-value=7.2e-09 Score=94.82 Aligned_cols=82 Identities=17% Similarity=0.131 Sum_probs=59.1
Q ss_pred hHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCc
Q 011049 289 SSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL 368 (494)
Q Consensus 289 ~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~ 368 (494)
....|.++||.|+.++. .|+|.+.......++..+++.. +++. .+.++|.++|||+||.++..++..+|++
T Consensus 33 ~~~~L~~~G~~V~~~~~---~g~g~s~~~~~~~~~l~~~i~~----~~~~--~~~~~v~lvGhS~GG~~~~~~~~~~p~~ 103 (319)
T d1cvla_ 33 IQSDLQSHGAKVYVANL---SGFQSDDGPNGRGEQLLAYVKQ----VLAA--TGATKVNLIGHSQGGLTSRYVAAVAPQL 103 (319)
T ss_dssp HHHHHHHTTCCEEECCC---BCSSCTTSTTSHHHHHHHHHHH----HHHH--HCCSCEEEEEETTHHHHHHHHHHHCGGG
T ss_pred HHHHHHHCCCEEEEecC---CCCCCCCCCcccHHHHHHHHHH----HHHH--hCCCCEEEEeccccHHHHHHHHHHCccc
Confidence 55688999999999655 3555554433333444444333 3332 1347899999999999999999999999
Q ss_pred eeEEEeCCCCC
Q 011049 369 FCCGIARSGSY 379 (494)
Q Consensus 369 ~~a~v~~~~~~ 379 (494)
++.+|.+++..
T Consensus 104 v~~vv~i~~p~ 114 (319)
T d1cvla_ 104 VASVTTIGTPH 114 (319)
T ss_dssp EEEEEEESCCT
T ss_pred cceEEEECCCC
Confidence 99999988753
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=98.87 E-value=4.4e-09 Score=94.83 Aligned_cols=82 Identities=10% Similarity=-0.098 Sum_probs=62.1
Q ss_pred hHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCC--
Q 011049 289 SSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP-- 366 (494)
Q Consensus 289 ~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p-- 366 (494)
....|+++||.|+..+.+ |+|.. ......+++.+.|+++.+.-. .++|.|+|||+||.++.+++.++|
T Consensus 52 ~~~~L~~~Gy~v~~~d~~---g~g~~-----d~~~sae~la~~i~~v~~~~g--~~kV~lVGhS~GG~~a~~~l~~~p~~ 121 (317)
T d1tcaa_ 52 WIPLSTQLGYTPCWISPP---PFMLN-----DTQVNTEYMVNAITALYAGSG--NNKLPVLTWSQGGLVAQWGLTFFPSI 121 (317)
T ss_dssp HHHHHHTTTCEEEEECCT---TTTCS-----CHHHHHHHHHHHHHHHHHHTT--SCCEEEEEETHHHHHHHHHHHHCGGG
T ss_pred HHHHHHhCCCeEEEecCC---CCCCC-----chHhHHHHHHHHHHHHHHhcc--CCceEEEEeCchHHHHHHHHHHCCCc
Confidence 556889999999986653 33332 124446677888888877632 368999999999999999999988
Q ss_pred -CceeEEEeCCCCCC
Q 011049 367 -HLFCCGIARSGSYN 380 (494)
Q Consensus 367 -~~~~a~v~~~~~~~ 380 (494)
++++.+|.+++...
T Consensus 122 ~~~V~~~v~i~~~~~ 136 (317)
T d1tcaa_ 122 RSKVDRLMAFAPDYK 136 (317)
T ss_dssp TTTEEEEEEESCCTT
T ss_pred chheeEEEEeCCCCC
Confidence 46889998887643
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=98.87 E-value=5.2e-10 Score=110.61 Aligned_cols=132 Identities=19% Similarity=0.253 Sum_probs=85.6
Q ss_pred EEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC-CCCCCCC
Q 011049 237 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI-IGEGDKL 315 (494)
Q Consensus 237 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~-~g~g~~~ 315 (494)
|..-++.|+...+.+ ++|||||+|||++..++.. .+..........++.++++||.++||-. .|+=...
T Consensus 98 L~LnI~~P~~~~~~~--~~PVlv~ihGG~f~~g~~~--------~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~ 167 (534)
T d1llfa_ 98 LTINVVRPPGTKAGA--NLPVMLWIFGGGFEIGSPT--------IFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGD 167 (534)
T ss_dssp CEEEEEECTTCCTTC--CEEEEEEECCSTTTSCCGG--------GSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSH
T ss_pred CEEEEEECCCCCCCC--CCeEEEEECCCccccCCCC--------CCCchhccchhhhccCCeEEEEeecCCCcccccCCc
Confidence 677888897654444 3999999999987543322 1221111112234568999999888732 2221100
Q ss_pred --CCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHh-----CC---CceeEEEeCCCC
Q 011049 316 --PNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAH-----AP---HLFCCGIARSGS 378 (494)
Q Consensus 316 --~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~-----~p---~~~~a~v~~~~~ 378 (494)
......+....|+..|++|+.++ ..-||+||.|+|+|.||..+...+.. .| .+|+.+|+.+|.
T Consensus 168 ~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs 243 (534)
T d1llfa_ 168 DIKAEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp HHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred ccccccccccchhHHHHHHHHHHhhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCc
Confidence 00001234688999999999885 22599999999999999988655542 11 369999999874
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.87 E-value=1.1e-09 Score=108.25 Aligned_cols=125 Identities=20% Similarity=0.210 Sum_probs=87.3
Q ss_pred EEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC-CCC---C
Q 011049 237 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI-IGE---G 312 (494)
Q Consensus 237 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~-~g~---g 312 (494)
|..-+|.|.+.... .++||+||+|||++..++.. .+. ....++..+.+||.++||-. .|+ +
T Consensus 97 L~LnI~~P~~~~~~--~~lPV~v~ihGG~~~~gs~~--------~~~-----~~~~~~~~~vIvVt~nYRLg~~GFl~~~ 161 (532)
T d2h7ca1 97 LYLNIYTPADLTKK--NRLPVMVWIHGGGLMVGAAS--------TYD-----GLALAAHENVVVVTIQYRLGIWGFFSTG 161 (532)
T ss_dssp CEEEEEECSCTTSC--CCEEEEEEECCSTTTSCCST--------TSC-----CHHHHHHHTCEEEEECCCCHHHHHCCCS
T ss_pred CEEEEEECCCCCCC--CCcEEEEEEeCCcccccccc--------cCC-----chhhhhcCceEEEEEeeccCCCcccccc
Confidence 66677889764433 34999999999987654322 121 12245789999999888732 332 1
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHh--CCCceeEEEeCCCCC
Q 011049 313 DKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGSY 379 (494)
Q Consensus 313 ~~~~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~--~p~~~~a~v~~~~~~ 379 (494)
...... +....|...|++|+.++ ..-||++|-|+|+|.||..+..++.. ...+|..+|+.+|..
T Consensus 162 ~~~~~g---N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~ 230 (532)
T d2h7ca1 162 DEHSRG---NWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 230 (532)
T ss_dssp STTCCC---CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred cccccc---ccccHHHHHHHHHHHHHHHHhcCCcceeeeeccccccchHHHHHhhhhccCcchhhhhhcccc
Confidence 111222 34588999999999885 23599999999999999988777653 235899999998754
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=98.83 E-value=6.6e-10 Score=110.04 Aligned_cols=131 Identities=20% Similarity=0.273 Sum_probs=86.3
Q ss_pred EEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHH-HhCCeEEEeCCCCC-CCCCCCC
Q 011049 237 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF-LARRFAVLAGPSIP-IIGEGDK 314 (494)
Q Consensus 237 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~G~~v~~~~~~~-~~g~g~~ 314 (494)
|..-+|.|++..+.++ +|||||+|||++..++.. .+.... .....+ +..+++|+.++||- ..|+-..
T Consensus 106 L~LnI~~P~~~~~~~~--lPV~V~ihGG~f~~G~~~--------~~~~~~-~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~ 174 (544)
T d1thga_ 106 LYLNVFRPAGTKPDAK--LPVMVWIYGGAFVYGSSA--------AYPGNS-YVKESINMGQPVVFVSINYRTGPFGFLGG 174 (544)
T ss_dssp CEEEEEEETTCCTTCC--EEEEEEECCCTTCCSGGG--------GCCSHH-HHHHHHHTTCCCEEEEECCCCHHHHHCCS
T ss_pred CEEEEEECCCCCCCCC--CCEEEEeccCCCccCCCc--------cCCcch-hhhhhhhccCCeEEEecccccccccccCC
Confidence 6777788987555444 999999999987654422 111100 111223 45789999988862 2232111
Q ss_pred C--CCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHhC--------CCceeEEEeCCCC
Q 011049 315 L--PNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHA--------PHLFCCGIARSGS 378 (494)
Q Consensus 315 ~--~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~~--------p~~~~a~v~~~~~ 378 (494)
. ......+..+.|...|++|+.++ ..-||++|-|+|+|.||..+..++... ..+|+.+|+.+|.
T Consensus 175 ~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~ 251 (544)
T d1thga_ 175 DAITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG 251 (544)
T ss_dssp HHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred chhhccccccHHHHHhhhhhhhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhccccccccc
Confidence 0 00011245688999999999885 235999999999999999887766532 2489999999875
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=98.82 E-value=1.3e-08 Score=94.05 Aligned_cols=63 Identities=21% Similarity=0.157 Sum_probs=48.2
Q ss_pred ccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcC-CCCCccCCcccHHHHHHHHHHHHH
Q 011049 411 ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLP-FEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 411 ~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~-~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
+.+|++|+|++..+.|.+.| +++.+++++.|. ..++.+++ ..||.-+. ...+.+...+.+||+
T Consensus 312 L~~I~a~~LvI~~~sD~lFP--p~~~~e~a~~l~----~a~~~~I~S~~GHDaFL-~e~~~~~~~I~~FL~ 375 (376)
T d2vata1 312 LAMITQPALIICARSDGLYS--FDEHVEMGRSIP----NSRLCVVDTNEGHDFFV-MEADKVNDAVRGFLD 375 (376)
T ss_dssp HTTCCSCEEEEECTTCSSSC--HHHHHHHHHHST----TEEEEECCCSCGGGHHH-HTHHHHHHHHHHHHT
T ss_pred HhhCCCCEEEEEeCcccCcC--HHHHHHHHHhcC----CCeEEEECCCCCccccc-cCHHHHHHHHHHHHc
Confidence 67899999999999999998 999999988885 36888887 66885321 234455666777775
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=98.78 E-value=2.3e-09 Score=104.59 Aligned_cols=129 Identities=21% Similarity=0.190 Sum_probs=85.7
Q ss_pred eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC-CCCCC--
Q 011049 236 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP-IIGEG-- 312 (494)
Q Consensus 236 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~-~~g~g-- 312 (494)
=|..-+|.|+.. .+ ++||+||+|||++..++..... + ......+..+++|+.++||- ..|+=
T Consensus 81 CL~lni~~P~~~--~~--~lPV~v~ihGG~~~~g~~~~~~------~-----~~~~~~~~~~vVvV~~nYRlg~~GFl~~ 145 (483)
T d1qe3a_ 81 CLYVNVFAPDTP--SQ--NLPVMVWIHGGAFYLGAGSEPL------Y-----DGSKLAAQGEVIVVTLNYRLGPFGFLHL 145 (483)
T ss_dssp CCEEEEEEECSS--CC--SEEEEEEECCSTTTSCCTTSGG------G-----CCHHHHHHHTCEEEEECCCCHHHHSCCC
T ss_pred CCEEEEEECCCC--CC--CCceEEEEeecccccCCccccc------c-----ccccccccCceEEEeecccccchhhccc
Confidence 367778889752 22 3999999999987654322111 1 11223345679999988873 22321
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHhC--CCceeEEEeCCCCC
Q 011049 313 DKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSY 379 (494)
Q Consensus 313 ~~~~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~~--p~~~~a~v~~~~~~ 379 (494)
.+.......+....|...|++|+.++ ..-||++|.|+|+|.||..+..++... ..+|+.+|+.+|..
T Consensus 146 ~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 217 (483)
T d1qe3a_ 146 SSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 217 (483)
T ss_dssp TTTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred cccccccccccccHHHHHHHHHHHHHHHHcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCCc
Confidence 11011111245688999999999885 235999999999999999988776542 25999999999864
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=98.77 E-value=3.1e-09 Score=104.46 Aligned_cols=130 Identities=18% Similarity=0.157 Sum_probs=84.3
Q ss_pred EEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHH-hCCeEEEeCCCCC-CCCCCCC
Q 011049 237 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIP-IIGEGDK 314 (494)
Q Consensus 237 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~~~-~~g~g~~ 314 (494)
|..-+|.|+..... .++||+||+|||++..++.. .+. .....++ ..+++|+.++||- ..|+=..
T Consensus 81 L~LnI~~P~~~~~~--~~~PV~v~ihGG~~~~G~~~--------~~~----~~~~~~~~~~~vVvVt~nYRlg~~GFl~~ 146 (517)
T d1ukca_ 81 LFINVFKPSTATSQ--SKLPVWLFIQGGGYAENSNA--------NYN----GTQVIQASDDVIVFVTFNYRVGALGFLAS 146 (517)
T ss_dssp CEEEEEEETTCCTT--CCEEEEEEECCSTTTSCCSC--------SCC----CHHHHHHTTSCCEEEEECCCCHHHHHCCC
T ss_pred CEEEEEeCCCCCCC--CCceEEEEEcCCccccCCCc--------ccc----chhhhhhhccccceEEEEecccceeecCc
Confidence 66777888764333 34899999999987654422 121 1122233 4668888888863 2222111
Q ss_pred CC--CchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHh----CCCceeEEEeCCCCCC
Q 011049 315 LP--NDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAH----APHLFCCGIARSGSYN 380 (494)
Q Consensus 315 ~~--~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~----~p~~~~a~v~~~~~~~ 380 (494)
.. .....+..+.|...|++|+.++ ..-||++|.|+|+|.||..+...+.. ...+|..+|+.+|...
T Consensus 147 ~~~~~~~~~N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~~ 221 (517)
T d1ukca_ 147 EKVRQNGDLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 221 (517)
T ss_dssp HHHHHSSCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHhhcCCcccccccccccchhhHHHHHhccccccccccceeeecccccc
Confidence 00 0001245688999999999885 23599999999999999988755543 2248999999998643
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.75 E-value=3.2e-09 Score=105.12 Aligned_cols=126 Identities=18% Similarity=0.196 Sum_probs=84.7
Q ss_pred EEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC-CCCC---C
Q 011049 237 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP-IIGE---G 312 (494)
Q Consensus 237 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~-~~g~---g 312 (494)
|..-+|.|..... .++||+||+|||++..++..... +. .....+..+.+|+.++||- ..|+ +
T Consensus 97 L~LnI~~P~~~~~---~~lPV~v~ihGG~~~~gs~~~~~------~~-----~~~~~~~~~vvvVt~nYRlg~~Gfl~~~ 162 (542)
T d2ha2a1 97 LYLNVWTPYPRPA---SPTPVLIWIYGGGFYSGAASLDV------YD-----GRFLAQVEGAVLVSMNYRVGTFGFLALP 162 (542)
T ss_dssp CEEEEEEESSCCS---SCEEEEEEECCSTTTCCCTTSGG------GC-----THHHHHHHCCEEEEECCCCHHHHHCCCT
T ss_pred CEEEEEecCCCCC---CCCcEEEEEEECccccccCcccc------cC-----chhhhhhccceeEeeeeeccceeeeccc
Confidence 6667777875322 23899999999987554432211 11 1112345789999988872 2222 1
Q ss_pred CC-CCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHhC--CCceeEEEeCCCCC
Q 011049 313 DK-LPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSY 379 (494)
Q Consensus 313 ~~-~~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~~--p~~~~a~v~~~~~~ 379 (494)
.. ... .+..+.|...|++|+.++ ..-||++|-|+|+|.||..+..++... ..+|..+|+.+|..
T Consensus 163 ~~~~~~---gN~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~ 232 (542)
T d2ha2a1 163 GSREAP---GNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (542)
T ss_dssp TCSSCC---SCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred ccccCC---CcCCcccHHHHHHHHHHHHHHhhcCccccccccccccccchhhhhhhhhhhHHhhhheeecccc
Confidence 11 112 234578999999999875 235999999999999999998776643 15899999998854
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.74 E-value=2.1e-09 Score=107.28 Aligned_cols=133 Identities=20% Similarity=0.200 Sum_probs=84.3
Q ss_pred EEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhC-CeEEEeCCCCC-CCCC---
Q 011049 237 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RFAVLAGPSIP-IIGE--- 311 (494)
Q Consensus 237 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~~v~~~~~~~-~~g~--- 311 (494)
|..-+|.|...... ..++|||||+|||++..++..... +..........+++. +.+||.++||- ..|+
T Consensus 81 L~LNI~~P~~~~~~-~~~lPV~V~iHGG~f~~Gs~~~~~------~~~~~~~dg~~la~~~~vIvVt~nYRlg~~GFl~~ 153 (579)
T d2bcea_ 81 LYLNIWVPQGRKEV-SHDLPVMIWIYGGAFLMGASQGAN------FLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLST 153 (579)
T ss_dssp CEEEEEEEECSSSC-CCSEEEEEECCCCSEEEC-------------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCC
T ss_pred CEEEEEECCCCCCC-CCCCcEEEEECCCcccCCCCCCcc------cCCccccchhhhhccCCEEEEeecccccccccccc
Confidence 67777888653221 124899999999987655433211 111111112345554 68889888862 2232
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHh--CCCceeEEEeCCCCC
Q 011049 312 GDKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGSY 379 (494)
Q Consensus 312 g~~~~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~--~p~~~~a~v~~~~~~ 379 (494)
+..... .+..+.|...|++|+.++ ..-||++|-|+|+|.||..+..++.. ...+|+.+|+.+|..
T Consensus 154 ~~~~~~---gN~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 223 (579)
T d2bcea_ 154 GDSNLP---GNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp SSTTCC---CCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred cccCCC---ccchhhHHHHHHHHHhhhhhhhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCCc
Confidence 112122 244688999999999886 23599999999999999988766553 236999999998753
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=98.71 E-value=5.9e-09 Score=102.94 Aligned_cols=129 Identities=16% Similarity=0.182 Sum_probs=85.3
Q ss_pred EEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC-CCCCCCCC
Q 011049 237 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP-IIGEGDKL 315 (494)
Q Consensus 237 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~-~~g~g~~~ 315 (494)
|..-++.|... . .++||+||+|||++..++..... + .....++.++.+||.++||- ..|+-...
T Consensus 92 L~LnI~~P~~~--~--~~lPV~v~ihGG~~~~g~~~~~~------~-----~~~~~~~~~~vvvVt~nYRlg~~GFl~~~ 156 (532)
T d1ea5a_ 92 LYLNIWVPSPR--P--KSTTVMVWIYGGGFYSGSSTLDV------Y-----NGKYLAYTEEVVLVSLSYRVGAFGFLALH 156 (532)
T ss_dssp CEEEEEECSSC--C--SSEEEEEEECCSTTTCCCTTCGG------G-----CTHHHHHHHTCEEEECCCCCHHHHHCCCT
T ss_pred CEEEEEeCCCC--C--CCCcEEEEEEcCCcccccCCccc------c-----CcchhhcccCccEEEEeeccccccccccc
Confidence 66677788752 2 23899999999987554332111 1 11223467899999988873 22321110
Q ss_pred -CCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHhC--CCceeEEEeCCCCCC
Q 011049 316 -PNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYN 380 (494)
Q Consensus 316 -~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~~--p~~~~a~v~~~~~~~ 380 (494)
......+..+.|...|++|+.++ ..-||++|.|+|+|.||..+..++... ..+|..+|+.++...
T Consensus 157 ~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~~ 227 (532)
T d1ea5a_ 157 GSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 227 (532)
T ss_dssp TCSSSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred cccCCCCcccchhHHHHHHHHHHHHHhhcCCccceEeeeecccccchhhhccCccchhhhhhheeeccccc
Confidence 11111234588999999999885 235999999999999999887776532 258999999887643
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.68 E-value=4.9e-08 Score=87.25 Aligned_cols=78 Identities=17% Similarity=0.101 Sum_probs=56.1
Q ss_pred hHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCc
Q 011049 289 SSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL 368 (494)
Q Consensus 289 ~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~ 368 (494)
....|.++||.|+.++.. +.+.. +...+++.+.|+.+.+.. ..+++.++||||||.++..++.++|++
T Consensus 31 i~~~L~~~G~~v~~~~~~---~~~~~-------~~~a~~l~~~i~~~~~~~--g~~~v~ligHS~GG~~~r~~~~~~p~~ 98 (285)
T d1ex9a_ 31 IPSALRRDGAQVYVTEVS---QLDTS-------EVRGEQLLQQVEEIVALS--GQPKVNLIGHSHGGPTIRYVAAVRPDL 98 (285)
T ss_dssp HHHHHHHTTCCEEEECCC---SSSCH-------HHHHHHHHHHHHHHHHHH--CCSCEEEEEETTHHHHHHHHHHHCGGG
T ss_pred HHHHHHhCCCEEEEeCCC---CCCCc-------HHHHHHHHHHHHHHHHHc--CCCeEEEEEECccHHHHHHHHHHCCcc
Confidence 556888999999996654 34322 222334444444444432 246899999999999999999999999
Q ss_pred eeEEEeCCCC
Q 011049 369 FCCGIARSGS 378 (494)
Q Consensus 369 ~~a~v~~~~~ 378 (494)
++.++.++..
T Consensus 99 v~~lv~i~tP 108 (285)
T d1ex9a_ 99 IASATSVGAP 108 (285)
T ss_dssp EEEEEEESCC
T ss_pred ceeEEEECCC
Confidence 9999988765
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.64 E-value=1.7e-08 Score=100.48 Aligned_cols=116 Identities=18% Similarity=0.186 Sum_probs=77.3
Q ss_pred CCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEEeCCCCC-CCCCC---C----CCCCchhHHH
Q 011049 253 GPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIP-IIGEG---D----KLPNDRFVEQ 323 (494)
Q Consensus 253 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~-~~g~g---~----~~~~~~~~~~ 323 (494)
.++|||||+|||++..++..... + ....|++ ...+||.++||- ..|+= . ........+.
T Consensus 137 ~~lPV~V~ihGG~f~~Gs~~~~~------~------~~~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~ 204 (571)
T d1dx4a_ 137 NGLPILIWIYGGGFMTGSATLDI------Y------NADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNV 204 (571)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGG------G------CCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCH
T ss_pred CCCeEEEEEeCCCccCCCCcccc------c------chhhhhhcCCeeEEeecceeccccccccccccccccccCCCCcc
Confidence 45899999999987654432211 1 1124454 468888888763 23321 0 0011112345
Q ss_pred HHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHhC--CCceeEEEeCCCCCC
Q 011049 324 LVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYN 380 (494)
Q Consensus 324 ~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~~--p~~~~a~v~~~~~~~ 380 (494)
.+.|...|++|+.++ ..-||++|-|+|+|.||..+..++... ..+|+.+|+.++...
T Consensus 205 Gl~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~~ 266 (571)
T d1dx4a_ 205 GLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMN 266 (571)
T ss_dssp HHHHHHHHHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTT
T ss_pred cchHHHHHHHHHHHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceeccccc
Confidence 688999999999986 225999999999999999998776543 258999999887644
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.63 E-value=1.3e-08 Score=100.26 Aligned_cols=129 Identities=19% Similarity=0.236 Sum_probs=84.2
Q ss_pred EEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC-CCCCCCC-
Q 011049 237 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP-IIGEGDK- 314 (494)
Q Consensus 237 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~-~~g~g~~- 314 (494)
|..-+|.|... .+ ++||+||+|||++..++..... +. .....+..+++|+.++||- ..|+-..
T Consensus 90 L~lnI~~P~~~--~~--~~PV~v~ihGG~~~~gs~~~~~------~~-----~~~~~~~~~vVvVt~nYRlg~~Gfl~~~ 154 (526)
T d1p0ia_ 90 LYLNVWIPAPK--PK--NATVLIWIYGGGFQTGTSSLHV------YD-----GKFLARVERVIVVSMNYRVGALGFLALP 154 (526)
T ss_dssp CEEEEEEESSC--CS--SEEEEEEECCSTTTSCCTTCGG------GC-----THHHHHHHCCEEEEECCCCHHHHHCCCT
T ss_pred CEEEEEeCCCC--CC--CCceEEEEECCCcccccCcccc------cC-----ccccccccceeEEecccccccccccCCC
Confidence 66777788752 22 3899999999987665433211 11 1112345799999988873 2221110
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHhC--CCceeEEEeCCCCCC
Q 011049 315 LPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYN 380 (494)
Q Consensus 315 ~~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~~--p~~~~a~v~~~~~~~ 380 (494)
.......+..+.|...|++|+.++ ..-||++|-|+|+|.||..+..++... ..+|+.+|+.++...
T Consensus 155 ~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~~ 225 (526)
T d1p0ia_ 155 GNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 225 (526)
T ss_dssp TCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred CcccccccccccchhhhhhhHHHHHHHhhcCchheeehhhccccceeeccccCCcchhhhhhhhccccccc
Confidence 011112244688999999999885 235999999999999999987665432 258999998887543
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=98.57 E-value=2.2e-07 Score=70.64 Aligned_cols=98 Identities=16% Similarity=0.035 Sum_probs=64.9
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 308 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 308 (494)
|-..+|.++++...- .-|.||++||.+ ..|.. ..+++|.|+++|.
T Consensus 5 ~~~~~G~~l~y~~~G----------~G~pvlllHG~~--------------~~w~~--------~L~~~yrvi~~Dl--- 49 (122)
T d2dsta1 5 YLHLYGLNLVFDRVG----------KGPPVLLVAEEA--------------SRWPE--------ALPEGYAFYLLDL--- 49 (122)
T ss_dssp EEEETTEEEEEEEEC----------CSSEEEEESSSG--------------GGCCS--------CCCTTSEEEEECC---
T ss_pred EEEECCEEEEEEEEc----------CCCcEEEEeccc--------------ccccc--------cccCCeEEEEEec---
Confidence 344578888776651 146788899842 11221 1468999999555
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC
Q 011049 309 IGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 367 (494)
Q Consensus 309 ~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~ 367 (494)
+|+|.+.......++..+|+.+.++.| + -++..|+|||+||.++..+++..+.
T Consensus 50 pG~G~S~~p~~s~~~~a~~i~~ll~~L---~---i~~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 50 PGYGRTEGPRMAPEELAHFVAGFAVMM---N---LGAPWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp TTSTTCCCCCCCHHHHHHHHHHHHHHT---T---CCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred cccCCCCCcccccchhHHHHHHHHHHh---C---CCCcEEEEeCccHHHHHHHHhhccc
Confidence 466666544444456666665555543 3 3678999999999999999997654
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.57 E-value=6.7e-08 Score=85.97 Aligned_cols=69 Identities=12% Similarity=0.065 Sum_probs=42.2
Q ss_pred CCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeC
Q 011049 296 RRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIAR 375 (494)
Q Consensus 296 ~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~ 375 (494)
.++.|+..+. .|+|.+. ..+..+.++..++..+ ...+++.++|||+||.+++.+|.++|++.+.++.+
T Consensus 48 L~~~v~~~d~---~g~~~~~----~~~~~a~~~~~~~~~~-----~~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l 115 (286)
T d1xkta_ 48 LSIPTYGLQC---TRAAPLD----SIHSLAAYYIDCIRQV-----QPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTH 115 (286)
T ss_dssp CSSCEEEECC---CTTSCCS----CHHHHHHHHHHHHHHH-----CCSSCCEEEEETHHHHHHHHHHHHHHHC------C
T ss_pred cCCeEEEEeC---CCCCCCC----CHHHHHHHHHHHHHHh-----cCCCceEEeecCCccHHHHHHHHHHHHcCCCceeE
Confidence 3677777444 3555442 2344555554444332 23468999999999999999999999988776655
Q ss_pred C
Q 011049 376 S 376 (494)
Q Consensus 376 ~ 376 (494)
.
T Consensus 116 ~ 116 (286)
T d1xkta_ 116 N 116 (286)
T ss_dssp C
T ss_pred E
Confidence 4
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.50 E-value=5.2e-07 Score=79.32 Aligned_cols=167 Identities=19% Similarity=0.136 Sum_probs=86.6
Q ss_pred CCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC---CCceeEE
Q 011049 296 RRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---PHLFCCG 372 (494)
Q Consensus 296 ~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~---p~~~~a~ 372 (494)
..+.|+..+. .|++.........+.+++++.+. +.+.. ...++.++|||+||.+++.+|.+. ...+..+
T Consensus 69 ~~~~V~al~~---pG~~~~e~~~~s~~~~a~~~~~~---i~~~~--~~~P~~L~GhS~Gg~vA~e~A~~l~~~g~~v~~l 140 (255)
T d1mo2a_ 69 GIAPVRAVPQ---PGYEEGEPLPSSMAAVAAVQADA---VIRTQ--GDKPFVVAGHSAGALMAYALATELLDRGHPPRGV 140 (255)
T ss_dssp TTCCEEEECC---TTSSTTCCEESSHHHHHHHHHHH---HHHTT--SSSCEEEEECSTTHHHHHHHHHHHHHHTCCCSEE
T ss_pred CCceEEEEeC---CCcCCCCCCCCCHHHHHHHHHHH---HHHhC--CCCCEEEEEeCCcHHHHHHHHHhhHhcCCCccEE
Confidence 3577777444 34444433333345555544443 33322 235799999999999999988764 3456777
Q ss_pred EeCCCCCCCCCC----------CCCccccccccccc-----HHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHH
Q 011049 373 IARSGSYNKTLT----------PFGFQTEFRTLWEA-----TNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAE 437 (494)
Q Consensus 373 v~~~~~~~~~~~----------~~~~~~~~~~~~~~-----~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~ 437 (494)
+++.+....... ........ ..... ...+.+.-.......+.+|++++.+++|.... ...
T Consensus 141 vlld~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~a~~~~~~~~~~~~~~~~~~p~l~v~a~~~~~~~--~~~-- 215 (255)
T d1mo2a_ 141 VLIDVYPPGHQDAMNAWLEELTATLFDRET-VRMDDTRLTALGAYDRLTGQWRPRETGLPTLLVSAGEPMGPW--PDD-- 215 (255)
T ss_dssp EEEECSCSSHHHHHHHHHHHHHTTCC-----CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCSSSSCC--TTC--
T ss_pred EEECCCCCCCccchhhHHHHHHHHhhcccc-ccCCHHHHHHHHHHHHHHhcCCCccccceEEEeecCCCCCcc--hhh--
Confidence 766553210000 00000000 00000 01111111111234678999999998876532 211
Q ss_pred HHHHHHHh-CCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 438 RFFDALKG-HGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 438 ~~~~~l~~-~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
..+. ...+++.+.+++ +|.....+......+.+.+||.
T Consensus 216 ----~w~~~~~~~~~~~~v~G-~H~~ml~~~~~~~A~~i~~~L~ 254 (255)
T d1mo2a_ 216 ----SWKPTWPFEHDTVAVPG-DHFTMVQEHADAIARHIDAWLG 254 (255)
T ss_dssp ----CCCCCCCSSCEEEECCS-CCSSCSSCCHHHHHHHHHHHHT
T ss_pred ----HHHHhCCCCcEEEEECC-CCcccccccHHHHHHHHHHHhC
Confidence 1111 234578899998 7763334556666677777773
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.46 E-value=3.8e-07 Score=84.06 Aligned_cols=131 Identities=8% Similarity=-0.044 Sum_probs=87.0
Q ss_pred eeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCC
Q 011049 19 IIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP 98 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~ 98 (494)
.|+++|+ ++++.++++.........+|||||+.|++.+. ...+++.+++++ ....+........ ..
T Consensus 67 ~v~v~d~---~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~----~~- 132 (360)
T d1k32a3 67 FLGIYDY---RTGKAEKFEENLGNVFAMGVDRNGKFAVVAND----RFEIMTVDLETG--KPTVIERSREAMI----TD- 132 (360)
T ss_dssp EEEEEET---TTCCEEECCCCCCSEEEEEECTTSSEEEEEET----TSEEEEEETTTC--CEEEEEECSSSCC----CC-
T ss_pred EEEEEEC---CCCcEEEeeCCCceEEeeeecccccccceecc----cccccccccccc--ceeeeeecccccc----cc-
Confidence 6899999 88999999888877788999999999998752 456888888877 5555544332211 22
Q ss_pred ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccc
Q 011049 99 MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINL 178 (494)
Q Consensus 99 ~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~ 178 (494)
+.|||||++|++...... ..........+.++|+.+++...+...... .....|+|
T Consensus 133 -~~~spdg~~la~~~~~~~-----------~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~------------~~~~~~sp 188 (360)
T d1k32a3 133 -FTISDNSRFIAYGFPLKH-----------GETDGYVMQAIHVYDMEGRKIFAATTENSH------------DYAPAFDA 188 (360)
T ss_dssp -EEECTTSCEEEEEEEECS-----------STTCSCCEEEEEEEETTTTEEEECSCSSSB------------EEEEEECT
T ss_pred -hhhccceeeeeeeccccc-----------cceeeccccceeeeccccCceeeecccccc------------cccccccC
Confidence 339999999999764210 000011123477888888765554433221 11247899
Q ss_pred cCcEEEEEE
Q 011049 179 NQLKILTSK 187 (494)
Q Consensus 179 d~~~~~~~~ 187 (494)
||+.+++..
T Consensus 189 dg~~l~~~s 197 (360)
T d1k32a3 189 DSKNLYYLS 197 (360)
T ss_dssp TSCEEEEEE
T ss_pred CCCEEEEEe
Confidence 998887654
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=98.19 E-value=1.6e-05 Score=75.45 Aligned_cols=159 Identities=10% Similarity=-0.025 Sum_probs=90.2
Q ss_pred CCCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeee---cccc
Q 011049 13 EVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD---RVFE 89 (494)
Q Consensus 13 ~~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~---~~~~ 89 (494)
..+-.+.|.++|. ++++...-..........+|||||++|+.. .+ ...+.++++.++ +.+.+.+ ....
T Consensus 37 ~~~d~g~v~v~D~---~t~~v~~~~~~g~~~~~v~fSpDG~~l~~~-s~---dg~v~~~d~~t~--~~~~~~~i~~~~~~ 107 (432)
T d1qksa2 37 TLRDAGQIALIDG---STYEIKTVLDTGYAVHISRLSASGRYLFVI-GR---DGKVNMIDLWMK--EPTTVAEIKIGSEA 107 (432)
T ss_dssp EETTTTEEEEEET---TTCCEEEEEECSSCEEEEEECTTSCEEEEE-ET---TSEEEEEETTSS--SCCEEEEEECCSEE
T ss_pred EEcCCCEEEEEEC---CCCcEEEEEeCCCCeeEEEECCCCCEEEEE-cC---CCCEEEEEeeCC--CceEEEEEecCCCC
Confidence 3555678999998 777766544443445678999999998654 33 346888888766 4333322 1111
Q ss_pred cccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeecc
Q 011049 90 NVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVF 169 (494)
Q Consensus 90 ~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s 169 (494)
.... -++. |||||++++..... . ..+.++|.++++............... .+.
T Consensus 108 ~~~~--~s~~--~SpDG~~l~vs~~~------------------~--~~v~i~d~~t~~~~~~~~~~~~~~~~~---~~~ 160 (432)
T d1qksa2 108 RSIE--TSKM--EGWEDKYAIAGAYW------------------P--PQYVIMDGETLEPKKIQSTRGMTYDEQ---EYH 160 (432)
T ss_dssp EEEE--ECCS--TTCTTTEEEEEEEE------------------T--TEEEEEETTTCCEEEEEECCEECTTTC---CEE
T ss_pred CCeE--Eecc--cCCCCCEEEEEcCC------------------C--CeEEEEeCccccceeeeccCCccccce---ecc
Confidence 1000 1233 89999998776531 1 138889999988776655432200000 000
Q ss_pred CCC---cccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEee
Q 011049 170 GQG---EEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQIT 210 (494)
Q Consensus 170 ~~~---~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt 210 (494)
.++ ...+|+|+..+++... ...++++++..+.+..++.
T Consensus 161 ~~~~~~~v~~s~dg~~~~vs~~---~~~~i~~~d~~~~~~~~~~ 201 (432)
T d1qksa2 161 PEPRVAAILASHYRPEFIVNVK---ETGKILLVDYTDLNNLKTT 201 (432)
T ss_dssp SCCCEEEEEECSSSSEEEEEET---TTTEEEEEETTCSSEEEEE
T ss_pred CCCceeEEEECCCCCEEEEEEc---cCCeEEEEEccCCCcceEE
Confidence 000 1255777777665443 2456777777665544433
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.07 E-value=3.4e-05 Score=71.27 Aligned_cols=112 Identities=4% Similarity=-0.100 Sum_probs=71.3
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeee------ccceEEEEEcCCCCCCCceEeeeccccc
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYK------TSQTRTWLVCPGSKDVAPRVLFDRVFEN 90 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~------~~~~~~~~~~~~~g~~~~~~lt~~~~~~ 90 (494)
..+||++|. ++++....+.... ...++|||||+.|++.+... .+...|+++|+.++ +.......+...
T Consensus 45 ~~~~~~~d~---~~~~~~~~~~~~~-~~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~--~~~~~i~~p~~~ 118 (368)
T d1mdah_ 45 TTENWVSCA---GCGVTLGHSLGAF-LSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF--LPIADIELPDAP 118 (368)
T ss_dssp SEEEEEEET---TTTEEEEEEEECT-TCEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC--CEEEEEEETTSC
T ss_pred cceEEEEeC---CCCcEEEEEeCCC-CCcceECCCCCEEEEEcccCccccccccCCeEEEEECCCC--cEeeeecCCccc
Confidence 457999998 7787777666544 34789999999999987522 13456999999876 444333322111
Q ss_pred cc-CCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEe
Q 011049 91 VY-SDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE 154 (494)
Q Consensus 91 ~~-~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~ 154 (494)
.. ..+....+.|||||+++++.... .+ .+.++|+.+++......
T Consensus 119 ~~~~g~~p~~~a~SpDGk~l~va~~~-----------------~~---~v~~~d~~~~~~~~~~~ 163 (368)
T d1mdah_ 119 RFSVGPRVHIIGNCASSACLLFFLFG-----------------SS---AAAGLSVPGASDDQLTK 163 (368)
T ss_dssp SCCBSCCTTSEEECTTSSCEEEEECS-----------------SS---CEEEEEETTTEEEEEEE
T ss_pred eecccCCccceEECCCCCEEEEEeCC-----------------CC---eEEEEECCCCcEeEEee
Confidence 11 11111134499999999876421 11 38889999987655443
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.98 E-value=8e-05 Score=67.86 Aligned_cols=92 Identities=10% Similarity=-0.038 Sum_probs=56.2
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeee------ccceEEEEEcCCCCCCCceEeeecccc
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYK------TSQTRTWLVCPGSKDVAPRVLFDRVFE 89 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~------~~~~~~~~~~~~~g~~~~~~lt~~~~~ 89 (494)
..+.||++|. ++++....... .....++|||||+.|++.+... .+...|++.|+.++ +.+........
T Consensus 26 ~~~~v~v~D~---~tg~~~~~~~~-g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~--~~~~~~~~~~~ 99 (355)
T d2bbkh_ 26 AVTQQFVIDG---EAGRVIGMIDG-GFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL--LPTADIELPDA 99 (355)
T ss_dssp SSEEEEEEET---TTTEEEEEEEE-CSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC--CEEEEEEETTC
T ss_pred CcCeEEEEEC---CCCcEEEEEEC-CCCCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCC--CEEEEEecCCc
Confidence 4568999999 77765543332 2344689999999998876421 12467999999887 44433322211
Q ss_pred cccCCCCCC-ceeeCCCCCEEEEEE
Q 011049 90 NVYSDPGSP-MMTRTSTGTNVIAKI 113 (494)
Q Consensus 90 ~~~~~~~~~-~~~~spDG~~i~~~~ 113 (494)
........| .+.|||||+++++..
T Consensus 100 ~~~~~~~~~~~~~~s~dg~~~~v~~ 124 (355)
T d2bbkh_ 100 PRFLVGTYPWMTSLTPDGKTLLFYQ 124 (355)
T ss_dssp CCCCBSCCGGGEEECTTSSEEEEEE
T ss_pred ceeecCCCCceEEEecCCCeeEEec
Confidence 111101122 344899999887754
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.78 E-value=0.00038 Score=65.53 Aligned_cols=89 Identities=12% Similarity=0.154 Sum_probs=56.8
Q ss_pred eeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeee------------eccceEEEEEcCCCCCCCceEeeec
Q 011049 19 IIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY------------KTSQTRTWLVCPGSKDVAPRVLFDR 86 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~------------~~~~~~~~~~~~~~g~~~~~~lt~~ 86 (494)
.|++.|+ ++|+....+-.....+.+.|++|++.|+|+... ..+..++|+..+.++..+.+.++.+
T Consensus 152 ~l~v~Dl---~tg~~~~~~i~~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e 228 (430)
T d1qfma1 152 TIKFMKV---DGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEF 228 (430)
T ss_dssp EEEEEET---TTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECC
T ss_pred eeEEecc---CcceecccccccccccceEEcCCCCEEEEEEeccccCcccccccccCCcceEEEEECCCCcccccccccc
Confidence 6677777 666544433333345678999999999998741 1235689999998875566677765
Q ss_pred ccccccCCCCCCceeeCCCCCEEEEEEe
Q 011049 87 VFENVYSDPGSPMMTRTSTGTNVIAKIK 114 (494)
Q Consensus 87 ~~~~~~~~~~~~~~~~spDG~~i~~~~~ 114 (494)
.....+ ...+..|+||++++....
T Consensus 229 ~d~~~~----~~~~~~s~d~~~l~i~~~ 252 (430)
T d1qfma1 229 PDEPKW----MGGAELSDDGRYVLLSIR 252 (430)
T ss_dssp TTCTTC----EEEEEECTTSCEEEEEEE
T ss_pred ccCCce----EEeeeccCCcceeeEEee
Confidence 432210 111225899998876553
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.78 E-value=0.0003 Score=63.89 Aligned_cols=135 Identities=10% Similarity=-0.075 Sum_probs=73.8
Q ss_pred eecCCCceEEEEeeee-ccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEE
Q 011049 47 SWCDDSLALVNETWYK-TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILL 125 (494)
Q Consensus 47 ~wspDg~~i~f~~~~~-~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~ 125 (494)
+.||||+.+++..... ....++|++|++++ +... ..+.. ..|.+.|||||++|++........
T Consensus 8 a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg--~~~~--~~~~g------~~~~~a~SpDg~~l~v~~~~~~~~------ 71 (355)
T d2bbkh_ 8 APAPDARRVYVNDPAHFAAVTQQFVIDGEAG--RVIG--MIDGG------FLPNPVVADDGSFIAHASTVFSRI------ 71 (355)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTT--EEEE--EEEEC------SSCEEEECTTSSCEEEEEEEEEET------
T ss_pred eeCCCCCEEEEEecccCCCcCeEEEEECCCC--cEEE--EEECC------CCCceEEcCCCCEEEEEeCCCccc------
Confidence 5689999986543221 23568999999877 4332 22221 233345999999998765321000
Q ss_pred ccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 126 NGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 126 ~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
..| .. ...|.++|+++++............ ...........|++|++.+++...+ ....++..+..+++
T Consensus 72 -~~g-~~---d~~v~v~D~~t~~~~~~~~~~~~~~----~~~~~~~~~~~~s~dg~~~~v~~~~--~~~~~~~~~~~~~~ 140 (355)
T d2bbkh_ 72 -ARG-ER---TDYVEVFDPVTLLPTADIELPDAPR----FLVGTYPWMTSLTPDGKTLLFYQFS--PAPAVGVVDLEGKA 140 (355)
T ss_dssp -TEE-EE---EEEEEEECTTTCCEEEEEEETTCCC----CCBSCCGGGEEECTTSSEEEEEECS--SSCEEEEEETTTTE
T ss_pred -ccc-CC---CCEEEEEECCCCCEEEEEecCCcce----eecCCCCceEEEecCCCeeEEecCC--CCceeeeeecCCCc
Confidence 000 00 1138889999987655433221100 0000111224789999888765433 23457777777665
Q ss_pred eeE
Q 011049 206 SSQ 208 (494)
Q Consensus 206 ~~~ 208 (494)
...
T Consensus 141 ~~~ 143 (355)
T d2bbkh_ 141 FKR 143 (355)
T ss_dssp EEE
T ss_pred Eee
Confidence 443
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=97.76 E-value=1.6e-05 Score=71.09 Aligned_cols=109 Identities=8% Similarity=-0.101 Sum_probs=65.4
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHH-HhCCeEEEeCCCCCCCCCCCCCCC-chhHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF-LARRFAVLAGPSIPIIGEGDKLPN-DRFVEQLVSSAEAAV 332 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~G~~v~~~~~~~~~g~g~~~~~-~~~~~~~~~d~~~~v 332 (494)
.|+++++||.-. +. ...+.......+ ....+.|+.+|-... ....... ..........+...|
T Consensus 70 ~pt~iiiHGw~~-----------~~--~~~~~~~~~~a~l~~~d~NVI~VDW~~~--a~~~Y~~a~~n~~~Vg~~ia~~i 134 (337)
T d1rp1a2 70 KKTRFIIHGFID-----------KG--EENWLLDMCKNMFKVEEVNCICVDWKKG--SQTSYTQAANNVRVVGAQVAQML 134 (337)
T ss_dssp SEEEEEECCCCC-----------TT--CTTHHHHHHHHHTTTCCEEEEEEECHHH--HSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcC-----------CC--CcchHHHHHHHHHhcCCceEEEEeeccc--cCcchHHHHHHHHHHHHHHHHHH
Confidence 699999999521 11 111111122233 345699998665321 1100000 011223345667778
Q ss_pred HHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC
Q 011049 333 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 379 (494)
Q Consensus 333 ~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 379 (494)
++|.+...+++++|.|+|||+||++|..+..+. ..+..++...|..
T Consensus 135 ~~l~~~~g~~~~~vhlIGhSLGAhvAG~aG~~~-~~l~rItgLDPA~ 180 (337)
T d1rp1a2 135 SMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRT-PGLGRITGLDPVE 180 (337)
T ss_dssp HHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTS-TTCCEEEEESCCC
T ss_pred HHHHHhcCCChhheEEEeecHHHhhhHHHHHhh-ccccceeccCCCc
Confidence 887776568999999999999999998666554 6677777777653
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=97.74 E-value=0.00021 Score=65.53 Aligned_cols=123 Identities=11% Similarity=-0.071 Sum_probs=68.2
Q ss_pred ccccceecCCCceEEEEeee-eccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccc
Q 011049 42 RFRSVSWCDDSLALVNETWY-KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQ 120 (494)
Q Consensus 42 ~~~~p~wspDg~~i~f~~~~-~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~ 120 (494)
.....++||||+++++.... .....++|++|.+++ + .+...+.. ..+.+.|||||+++++......
T Consensus 22 p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg--~--~~~~~~~~------~~~~~a~SpDG~~l~va~~~~~--- 88 (373)
T d2madh_ 22 PTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSG--S--ILGHVNGG------FLPNPVAAHSGSEFALASTSFS--- 88 (373)
T ss_pred CccccccCCCCCEEEEEcccccCCCceEEEEECCCC--C--EEEEEeCC------CCccEEEcCCCCEEEEEeecCC---
Confidence 34566899999998776431 112468999998876 3 33333322 2233449999999988763210
Q ss_pred eEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEec
Q 011049 121 IYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKES 189 (494)
Q Consensus 121 ~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s 189 (494)
. ... ......+.++|..+++.......... .............+++|++.+++....
T Consensus 89 -~------~~~-~~~~~~v~v~D~~t~~~~~~~~~~~~----~~~~~~~~~~~~~~s~dg~~~~v~~~~ 145 (373)
T d2madh_ 89 -R------IAK-GKRTDYVEVFDPVTFLPIADIELPDA----PRFDVGPYSWMNANTPNNADLLFFQFA 145 (373)
T ss_pred -c------ccc-cccceEEEEEECCCCcEEEEEecCCc----ceeEeccCCCcEEEEeCCCcEEEEEEc
Confidence 0 000 00112388899999876544332211 001111112334778888777665544
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=97.73 E-value=0.00036 Score=63.87 Aligned_cols=91 Identities=5% Similarity=-0.192 Sum_probs=54.7
Q ss_pred CccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeec------cceEEEEEcCCCCCCCceEeeeccc
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT------SQTRTWLVCPGSKDVAPRVLFDRVF 88 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~------~~~~~~~~~~~~g~~~~~~lt~~~~ 88 (494)
+..++||++|. +.++...-... .....++|||||+.|++...... +...|++.|+.++ +.........
T Consensus 44 ~~~~~v~v~D~---~tg~~~~~~~~-~~~~~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~--~~~~~~~~~~ 117 (373)
T d2madh_ 44 SAIIQQWVLDA---GSGSILGHVNG-GFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF--LPIADIELPD 117 (373)
T ss_pred CCCceEEEEEC---CCCCEEEEEeC-CCCccEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCC--cEEEEEecCC
Confidence 34568999998 66665542222 23346899999999998764221 2467899998877 4444333322
Q ss_pred cccc---CCCCCCceeeCCCCCEEEEEE
Q 011049 89 ENVY---SDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 89 ~~~~---~~~~~~~~~~spDG~~i~~~~ 113 (494)
.... ..|.. +.++|||+.+++..
T Consensus 118 ~~~~~~~~~~~~--~~~s~dg~~~~v~~ 143 (373)
T d2madh_ 118 APRFDVGPYSWM--NANTPNNADLLFFQ 143 (373)
T ss_pred cceeEeccCCCc--EEEEeCCCcEEEEE
Confidence 1110 11222 23789998877654
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=97.71 E-value=0.00037 Score=62.42 Aligned_cols=86 Identities=12% Similarity=0.056 Sum_probs=47.9
Q ss_pred cceeeeccCCCCCCCCCe--eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 17 RDIIYTQPAEPAEGEKPE--ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~--~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
.+.|+++++.+ . +..+ +..........++|||||++|+.....++ .-.+|.++..+. ..+.+......
T Consensus 13 ~~~I~v~~~~~-~-~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~-~i~~~~i~~~~~--~~~~~~~~~~~----- 82 (333)
T d1ri6a_ 13 SQQIHVWNLNH-E-GALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEF-RVLAYRIAPDDG--ALTFAAESALP----- 82 (333)
T ss_dssp GTEEEEEEECT-T-SCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTT-EEEEEEECTTTC--CEEEEEEEECS-----
T ss_pred CCcEEEEEEcC-C-CCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCC-eEEEEEEeCCCC--cEEEeeecccC-----
Confidence 35677777611 2 2223 33344455678899999999865543222 334555554433 43444333222
Q ss_pred CCCCc-eeeCCCCCEEEEEE
Q 011049 95 PGSPM-MTRTSTGTNVIAKI 113 (494)
Q Consensus 95 ~~~~~-~~~spDG~~i~~~~ 113 (494)
..|. +.|||||++|+...
T Consensus 83 -~~p~~l~~spDg~~l~v~~ 101 (333)
T d1ri6a_ 83 -GSLTHISTDHQGQFVFVGS 101 (333)
T ss_dssp -SCCSEEEECTTSSEEEEEE
T ss_pred -CCceEEEEcCCCCEEeecc
Confidence 2232 44999999887754
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.67 E-value=0.00023 Score=65.36 Aligned_cols=134 Identities=13% Similarity=0.050 Sum_probs=77.2
Q ss_pred eecCCCce--EEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEE
Q 011049 47 SWCDDSLA--LVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYIL 124 (494)
Q Consensus 47 ~wspDg~~--i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~ 124 (494)
+-++||+. |++.+...+ ..++|++|.+++ +....+.... .+...|||||+.|++......
T Consensus 26 a~~~~~~~~~v~~~~~~~g-~~~~~~~d~~~~--~~~~~~~~~~--------~~~~a~spDg~~i~~~~~~~~------- 87 (368)
T d1mdah_ 26 GPGAISRRSHITLPAYFAG-TTENWVSCAGCG--VTLGHSLGAF--------LSLAVAGHSGSDFALASTSFA------- 87 (368)
T ss_dssp CCCCCTTEEEEEECTTTCS-SEEEEEEETTTT--EEEEEEEECT--------TCEEEECTTSSCEEEEEEEET-------
T ss_pred ccCCCCcceeEEeeccCCC-cceEEEEeCCCC--cEEEEEeCCC--------CCcceECCCCCEEEEEcccCc-------
Confidence 34567765 444444444 578999999987 5555443322 122349999999998764210
Q ss_pred EccCCCCCCCC-CCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 125 LNGRGFTPEGN-IPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 125 ~~~~g~~~~~~-~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
. ...+. ...+.++|..+++.......+... ............|||||+++++.... +..++++++.+
T Consensus 88 --~---~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~----~~~~g~~p~~~a~SpDGk~l~va~~~---~~~v~~~d~~~ 155 (368)
T d1mdah_ 88 --R---SAKGKRTDYVEVFDPVTFLPIADIELPDAP----RFSVGPRVHIIGNCASSACLLFFLFG---SSAAAGLSVPG 155 (368)
T ss_dssp --T---TTSSSEEEEEEEECTTTCCEEEEEEETTSC----SCCBSCCTTSEEECTTSSCEEEEECS---SSCEEEEEETT
T ss_pred --c---ccccccCCeEEEEECCCCcEeeeecCCccc----eecccCCccceEECCCCCEEEEEeCC---CCeEEEEECCC
Confidence 0 00111 124889999998765433322110 00000111235799999988875433 56788999888
Q ss_pred CceeEee
Q 011049 204 KKSSQIT 210 (494)
Q Consensus 204 ~~~~~lt 210 (494)
++.....
T Consensus 156 ~~~~~~~ 162 (368)
T d1mdah_ 156 ASDDQLT 162 (368)
T ss_dssp TEEEEEE
T ss_pred CcEeEEe
Confidence 7765543
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.66 E-value=0.00049 Score=64.60 Aligned_cols=110 Identities=12% Similarity=0.018 Sum_probs=65.6
Q ss_pred CCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeec---cccc
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR---VFEN 90 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~---~~~~ 90 (494)
.+..+.|.++|+ .+++...-......-...+|||||+.|+. +.+ ...+.+.+++++ +...+..- .+..
T Consensus 38 ~~~dg~v~vwD~---~t~~~~~~l~~g~~~~~vafSPDGk~l~~-~~~---d~~v~vwd~~t~--~~~~~~~i~~~~~~~ 108 (426)
T d1hzua2 38 LRDAGQIALVDG---DSKKIVKVIDTGYAVHISRMSASGRYLLV-IGR---DARIDMIDLWAK--EPTKVAEIKIGIEAR 108 (426)
T ss_dssp ETTTTEEEEEET---TTCSEEEEEECCSSEEEEEECTTSCEEEE-EET---TSEEEEEETTSS--SCEEEEEEECCSEEE
T ss_pred EcCCCEEEEEEC---CCCcEEEEEeCCCCeeEEEECCCCCEEEE-EeC---CCCEEEEEccCC--ceeEEEEEeCCCCCc
Confidence 345679999999 76665433333234557899999998754 433 346888888876 43332221 1111
Q ss_pred ccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeC
Q 011049 91 VYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESN 156 (494)
Q Consensus 91 ~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~ 156 (494)
.. ..++. |||||++++..... . ..+.++|.++++...+....
T Consensus 109 ~~--~~s~~--~spDG~~l~v~~~~------------------~--~~v~i~d~~~~~~~~~~~~~ 150 (426)
T d1hzua2 109 SV--ESSKF--KGYEDRYTIAGAYW------------------P--PQFAIMDGETLEPKQIVSTR 150 (426)
T ss_dssp EE--EECCS--TTCTTTEEEEEEEE------------------S--SEEEEEETTTCCEEEEEECC
T ss_pred ce--EEeee--ecCCCCEEEEeecC------------------C--CeEEEEcCCccceeEEeecc
Confidence 00 02333 89999988766521 1 13777888888776665543
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.60 E-value=4.8e-05 Score=67.81 Aligned_cols=110 Identities=8% Similarity=-0.084 Sum_probs=67.5
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHH-hCCeEEEeCCCCCCCCCCCCCCC-chhHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIPIIGEGDKLPN-DRFVEQLVSSAEAAV 332 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~~~~~g~g~~~~~-~~~~~~~~~d~~~~v 332 (494)
.|+++++||.. ++. ...+.......++ ...+.|+.+|-... ....... .......-..+...|
T Consensus 70 ~pt~iiiHG~~-----------~~~--~~~~~~~~~~a~l~~~d~NVi~VDW~~~--a~~~Y~~a~~n~~~Vg~~ia~~i 134 (338)
T d1bu8a2 70 RKTRFIVHGFI-----------DKG--EDGWLLDMCKKMFQVEKVNCICVDWRRG--SRTEYTQASYNTRVVGAEIAFLV 134 (338)
T ss_dssp SEEEEEECCSC-----------CTT--CTTHHHHHHHHHHTTCCEEEEEEECHHH--HSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEeCccc-----------CCC--CcccHHHHHHHHHhcCCceEEEEechhh--cccchHHHHHhHHHHHHHHHHHH
Confidence 69999999952 111 1111112222334 45699998665221 1100000 011123344556677
Q ss_pred HHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC
Q 011049 333 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 379 (494)
Q Consensus 333 ~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 379 (494)
++|.....++.++|.++|||.|+++|..+..+-+.++..++...|..
T Consensus 135 ~~l~~~~g~~~~~vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~ 181 (338)
T d1bu8a2 135 QVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (338)
T ss_dssp HHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred HHHHHhcCCCcceeEEEeccHHHHHHHHHHHhhccccccccccccCc
Confidence 77776655889999999999999999999888777788888777653
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=97.44 E-value=0.00076 Score=60.51 Aligned_cols=107 Identities=7% Similarity=-0.085 Sum_probs=63.4
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCC-ceeeCCCCCEEEEEEeccCccceEE
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP-MMTRTSTGTNVIAKIKKENDEQIYI 123 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~-~~~~spDG~~i~~~~~~~~~~~~~~ 123 (494)
+|++|+||+.|+..+ +.+.|.++|++++ + .+........ ..| -+.|||||++++....
T Consensus 1 g~a~~~~~~~l~~~~----~~~~v~v~D~~t~--~--~~~t~~~~~~----~~p~~l~~spDG~~l~v~~~--------- 59 (346)
T d1jmxb_ 1 GPALKAGHEYMIVTN----YPNNLHVVDVASD--T--VYKSCVMPDK----FGPGTAMMAPDNRTAYVLNN--------- 59 (346)
T ss_dssp CCCCCTTCEEEEEEE----TTTEEEEEETTTT--E--EEEEEECSSC----CSSCEEEECTTSSEEEEEET---------
T ss_pred CccCCCCCcEEEEEc----CCCEEEEEECCCC--C--EEEEEEcCCC----CCcceEEECCCCCEEEEEEC---------
Confidence 489999999988764 2568999999876 3 3322211110 122 3448999998876542
Q ss_pred EEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEe
Q 011049 124 LLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKE 188 (494)
Q Consensus 124 ~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~ 188 (494)
.. ..++++|+.+++........... ......-....++|||+.+++...
T Consensus 60 ---------~~--~~v~~~d~~t~~~~~~~~~~~~~-----~~~~~~~~~v~~s~DG~~l~v~~~ 108 (346)
T d1jmxb_ 60 ---------HY--GDIYGIDLDTCKNTFHANLSSVP-----GEVGRSMYSFAISPDGKEVYATVN 108 (346)
T ss_dssp ---------TT--TEEEEEETTTTEEEEEEESCCST-----TEEEECSSCEEECTTSSEEEEEEE
T ss_pred ---------CC--CcEEEEeCccCeeeeeecccccc-----cccCCceEEEEEecCCCEEEEEec
Confidence 11 24899999998765433322110 000011123478999988876543
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.41 E-value=0.0014 Score=58.31 Aligned_cols=156 Identities=9% Similarity=-0.076 Sum_probs=84.6
Q ss_pred CccceeeeccCCCCCCCCCeeccc-c--ccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc-
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHK-L--DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN- 90 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~-~--~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~- 90 (494)
+..+.|+++|+ +.++...... . ......++|||||+.++.+... ...|+++|+.++ +...-.......
T Consensus 8 ~~d~~v~v~D~---~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~---~~~v~v~D~~t~--~~~~~~~~~~~~~ 79 (337)
T d1pbyb_ 8 ARPDKLVVIDT---EKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK---SESLVKIDLVTG--ETLGRIDLSTPEE 79 (337)
T ss_dssp ETTTEEEEEET---TTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT---TTEEEEEETTTC--CEEEEEECCBTTE
T ss_pred cCCCEEEEEEC---CCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECC---CCeEEEEECCCC--cEEEEEecCCCcc
Confidence 34579999999 6665443222 1 1233578999999987665322 457999999987 443322221111
Q ss_pred ccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccC
Q 011049 91 VYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFG 170 (494)
Q Consensus 91 ~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~ 170 (494)
....+.. +.+||||++++............ . ......+.++|..+++..........
T Consensus 80 ~~~~~~~--v~~s~dg~~l~~~~~~~~~~~~~-~--------~~~~~~~~~~d~~~~~~~~~~~~~~~------------ 136 (337)
T d1pbyb_ 80 RVKSLFG--AALSPDGKTLAIYESPVRLELTH-F--------EVQPTRVALYDAETLSRRKAFEAPRQ------------ 136 (337)
T ss_dssp EEECTTC--EEECTTSSEEEEEEEEEEECSSC-E--------EECCCEEEEEETTTTEEEEEEECCSS------------
T ss_pred cccceee--EEEcCCCcEEEEeecCCcceeee-c--------cccccceeeccccCCeEEEeccccCC------------
Confidence 0011122 33899999987765321000000 0 01122477788888765443332211
Q ss_pred CCcccccccCcEEEEEEecCCCCCeEEEEEcCCCcee
Q 011049 171 QGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 207 (494)
Q Consensus 171 ~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~ 207 (494)
.....+++||+.++... .....++..+++..
T Consensus 137 ~~~~~~s~dg~~l~~~~------~~~~~~d~~~~~~~ 167 (337)
T d1pbyb_ 137 ITMLAWARDGSKLYGLG------RDLHVMDPEAGTLV 167 (337)
T ss_dssp CCCEEECTTSSCEEEES------SSEEEEETTTTEEE
T ss_pred ceEEEEcCCCCEEEEEc------CCcceeeeecCcEE
Confidence 11247889998776532 23556676665543
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=97.40 E-value=0.00023 Score=61.79 Aligned_cols=36 Identities=17% Similarity=0.162 Sum_probs=30.2
Q ss_pred CCcEEEEecChHHHHHHHHHHhCCC-ceeEEEeCCCC
Q 011049 343 PSRIAVGGHSYGAFMTAHLLAHAPH-LFCCGIARSGS 378 (494)
Q Consensus 343 ~~ri~i~G~S~GG~~a~~~~~~~p~-~~~a~v~~~~~ 378 (494)
.+++-++|||+||.++-.++.+.++ .++..|++++.
T Consensus 79 ~~~v~lVGhSqGGLiaR~~i~~~~~~~V~~lITLgsP 115 (279)
T d1ei9a_ 79 QQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQ 115 (279)
T ss_dssp TTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCC
T ss_pred ccceeEEEEccccHHHHHHHHHcCCCCcceEEEECCC
Confidence 3689999999999999999999875 57788877654
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=97.37 E-value=0.0032 Score=58.95 Aligned_cols=155 Identities=10% Similarity=0.036 Sum_probs=85.3
Q ss_pred CccceeeeccCCCCCCCCCeec---cc---cccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccc
Q 011049 15 SPRDIIYTQPAEPAEGEKPEIL---HK---LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVF 88 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~l---t~---~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~ 88 (494)
+..+.|.++|+ .+++.+.. .. .......|.|||||++|+..... ...+.+.++.++ +.........
T Consensus 80 s~dg~v~~~d~---~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~---~~~v~i~d~~t~--~~~~~~~~~~ 151 (432)
T d1qksa2 80 GRDGKVNMIDL---WMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYW---PPQYVIMDGETL--EPKKIQSTRG 151 (432)
T ss_dssp ETTSEEEEEET---TSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEE---TTEEEEEETTTC--CEEEEEECCE
T ss_pred cCCCCEEEEEe---eCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCC---CCeEEEEeCccc--cceeeeccCC
Confidence 44568888888 55554322 21 12233467899999997765432 357888998877 6665544322
Q ss_pred ccc----c-CCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhh
Q 011049 89 ENV----Y-SDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFET 163 (494)
Q Consensus 89 ~~~----~-~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~ 163 (494)
... + .++....+..||||+.+++... . ...+.++|..+++...++.-.... .
T Consensus 152 ~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~------------------~--~~~i~~~d~~~~~~~~~~~i~~g~---~ 208 (432)
T d1qksa2 152 MTYDEQEYHPEPRVAAILASHYRPEFIVNVK------------------E--TGKILLVDYTDLNNLKTTEISAER---F 208 (432)
T ss_dssp ECTTTCCEESCCCEEEEEECSSSSEEEEEET------------------T--TTEEEEEETTCSSEEEEEEEECCS---S
T ss_pred ccccceeccCCCceeEEEECCCCCEEEEEEc------------------c--CCeEEEEEccCCCcceEEEEcccC---c
Confidence 110 0 0001011235677766555441 1 114788888777655555422110 0
Q ss_pred eeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEee
Q 011049 164 AVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQIT 210 (494)
Q Consensus 164 ~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt 210 (494)
. ....++|||+.+++.... -..+..++..+.+.....
T Consensus 209 ~-------~~~~~spdg~~~~va~~~---~~~v~v~d~~~~~~~~~~ 245 (432)
T d1qksa2 209 L-------HDGGLDGSHRYFITAANA---RNKLVVIDTKEGKLVAIE 245 (432)
T ss_dssp E-------EEEEECTTSCEEEEEEGG---GTEEEEEETTTTEEEEEE
T ss_pred c-------ccceECCCCCEEEEeccc---cceEEEeecccceEEEEe
Confidence 0 123789999877765433 245777787766554443
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=97.32 E-value=0.0023 Score=55.89 Aligned_cols=140 Identities=8% Similarity=0.005 Sum_probs=80.1
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
.+.|.++|+ ++++..+-..........+|||||++|+..... ...|.++|+.++ +.......... |.
T Consensus 11 ~~~v~v~D~---~t~~~~~~i~~g~~p~~va~spdG~~l~v~~~~---~~~i~v~d~~t~--~~~~~~~~~~~-----~~ 77 (301)
T d1l0qa2 11 SDNISVIDV---TSNKVTATIPVGSNPMGAVISPDGTKVYVANAH---SNDVSIIDTATN--NVIATVPAGSS-----PQ 77 (301)
T ss_dssp TTEEEEEET---TTTEEEEEEECSSSEEEEEECTTSSEEEEEEGG---GTEEEEEETTTT--EEEEEEECSSS-----EE
T ss_pred CCEEEEEEC---CCCeEEEEEECCCCceEEEEeCCCCEEEEEECC---CCEEEEEECCCC--ceeeeeecccc-----cc
Confidence 456889998 666644433333334567899999998654322 457999999876 43332221111 11
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.+.+++||+.++..... . ..+.+++..+++.......... . ....+
T Consensus 78 --~~~~~~~~~~~~~~~~~------------------~--~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~ 123 (301)
T d1l0qa2 78 --GVAVSPDGKQVYVTNMA------------------S--STLSVIDTTSNTVAGTVKTGKS-----P-------LGLAL 123 (301)
T ss_dssp --EEEECTTSSEEEEEETT------------------T--TEEEEEETTTTEEEEEEECSSS-----E-------EEEEE
T ss_pred --ccccccccccccccccc------------------c--ceeeecccccceeeeecccccc-----c-------eEEEe
Confidence 23389999988775421 1 1367778777754443332211 0 12367
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCce
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKS 206 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~ 206 (494)
++|+..+++.... ...+...+..+.+.
T Consensus 124 ~~dg~~~~~~~~~---~~~~~~~~~~~~~~ 150 (301)
T d1l0qa2 124 SPDGKKLYVTNNG---DKTVSVINTVTKAV 150 (301)
T ss_dssp CTTSSEEEEEETT---TTEEEEEETTTTEE
T ss_pred ecCCCeeeeeecc---ccceeeeeccccce
Confidence 8888877665432 23456666555543
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.13 E-value=0.0084 Score=55.71 Aligned_cols=125 Identities=14% Similarity=0.042 Sum_probs=73.9
Q ss_pred ccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEE
Q 011049 44 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYI 123 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~ 123 (494)
..|.+++|.+.+++++..+ ...|.+.|+.++ +...... ... .|. .+.+||||++++... .
T Consensus 22 ~~~~~~~d~~~~~~V~~~~--dg~v~vwD~~t~--~~~~~l~--~g~---~~~--~vafSPDGk~l~~~~-~-------- 81 (426)
T d1hzua2 22 KKQLNDLDLPNLFSVTLRD--AGQIALVDGDSK--KIVKVID--TGY---AVH--ISRMSASGRYLLVIG-R-------- 81 (426)
T ss_dssp SSCCSCCCGGGEEEEEETT--TTEEEEEETTTC--SEEEEEE--CCS---SEE--EEEECTTSCEEEEEE-T--------
T ss_pred CcccccCCCCeEEEEEEcC--CCEEEEEECCCC--cEEEEEe--CCC---Cee--EEEECCCCCEEEEEe-C--------
Confidence 4577889988888776543 468999999877 3332222 211 112 234899999886543 1
Q ss_pred EEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 124 LLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 124 ~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
++ .+.++|+++++...+..-... ..+.... .+..|+|||+++++.... +..+.+++..+
T Consensus 82 ---------d~---~v~vwd~~t~~~~~~~~i~~~---~~~~~~~---~s~~~spDG~~l~v~~~~---~~~v~i~d~~~ 140 (426)
T d1hzua2 82 ---------DA---RIDMIDLWAKEPTKVAEIKIG---IEARSVE---SSKFKGYEDRYTIAGAYW---PPQFAIMDGET 140 (426)
T ss_dssp ---------TS---EEEEEETTSSSCEEEEEEECC---SEEEEEE---ECCSTTCTTTEEEEEEEE---SSEEEEEETTT
T ss_pred ---------CC---CEEEEEccCCceeEEEEEeCC---CCCcceE---EeeeecCCCCEEEEeecC---CCeEEEEcCCc
Confidence 11 388899998875544331110 0000110 134789999988765543 35677778777
Q ss_pred CceeEe
Q 011049 204 KKSSQI 209 (494)
Q Consensus 204 ~~~~~l 209 (494)
++....
T Consensus 141 ~~~~~~ 146 (426)
T d1hzua2 141 LEPKQI 146 (426)
T ss_dssp CCEEEE
T ss_pred cceeEE
Confidence 665443
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.05 E-value=0.0061 Score=54.03 Aligned_cols=140 Identities=11% Similarity=0.041 Sum_probs=74.5
Q ss_pred ceeeeccCCCCCCCCCe-eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 18 DIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~-~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
+.|+++++ +.++.. .++.........+|||||+.|+-.+ . ...|.+.++..+ +.......... .
T Consensus 38 ~~v~i~~~---~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~-~---dg~i~iwd~~~~--~~~~~~~~~~~------~ 102 (311)
T d1nr0a1 38 TSVYTVPV---GSLTDTEIYTEHSHQTTVAKTSPSGYYCASGD-V---HGNVRIWDTTQT--THILKTTIPVF------S 102 (311)
T ss_dssp TEEEEEET---TCSSCCEEECCCSSCEEEEEECTTSSEEEEEE-T---TSEEEEEESSST--TCCEEEEEECS------S
T ss_pred CEEEEEEC---CCCceeEEEcCCCCCEEEEEEeCCCCeEeccc-c---CceEeeeeeecc--ccccccccccc------c
Confidence 46788888 555444 4454456667889999999887543 2 334666666654 22222211111 1
Q ss_pred CC--ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcc
Q 011049 97 SP--MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEE 174 (494)
Q Consensus 97 ~~--~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~ 174 (494)
.+ .+.|+|||+.++..... ....+.++++++++.......... .. ...
T Consensus 103 ~~v~~v~~s~d~~~l~~~~~~-------------------~~~~~~v~~~~~~~~~~~l~~h~~----~v-------~~v 152 (311)
T d1nr0a1 103 GPVKDISWDSESKRIAAVGEG-------------------RERFGHVFLFDTGTSNGNLTGQAR----AM-------NSV 152 (311)
T ss_dssp SCEEEEEECTTSCEEEEEECC-------------------SSCSEEEEETTTCCBCBCCCCCSS----CE-------EEE
T ss_pred Ccccccccccccccccccccc-------------------cccccccccccccccccccccccc----cc-------ccc
Confidence 22 24599999988776421 111245566666543221111100 00 123
Q ss_pred cccccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 175 DINLNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 175 ~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
.|+|++..++++... -..+.+++..+.+
T Consensus 153 ~~~~~~~~~l~sgs~---d~~i~i~d~~~~~ 180 (311)
T d1nr0a1 153 DFKPSRPFRIISGSD---DNTVAIFEGPPFK 180 (311)
T ss_dssp EECSSSSCEEEEEET---TSCEEEEETTTBE
T ss_pred cccccceeeeccccc---ccccccccccccc
Confidence 678888765554432 2346777766544
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=96.87 E-value=0.012 Score=51.11 Aligned_cols=141 Identities=5% Similarity=-0.031 Sum_probs=76.7
Q ss_pred eeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCC
Q 011049 19 IIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP 98 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~ 98 (494)
.+++++. ..++...............|+||++.++..... ...+++.+.... +.......... |...
T Consensus 139 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~-----~~~~ 205 (301)
T d1l0qa2 139 TVSVINT---VTKAVINTVSVGRSPKGIAVTPDGTKVYVANFD---SMSISVIDTVTN--SVIDTVKVEAA-----PSGI 205 (301)
T ss_dssp EEEEEET---TTTEEEEEEECCSSEEEEEECTTSSEEEEEETT---TTEEEEEETTTT--EEEEEEECSSE-----EEEE
T ss_pred ceeeeec---cccceeeecccCCCceEEEeeccccceeeeccc---ccccccccccce--eeeecccccCC-----ccee
Confidence 4555555 333333333333333456799999987765422 234555555543 22222221111 1222
Q ss_pred ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccc
Q 011049 99 MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINL 178 (494)
Q Consensus 99 ~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~ 178 (494)
.+++||+.+++.... .....++++|+.+++.......... + ....|||
T Consensus 206 --~~~~~g~~~~v~~~~------------------~~~~~v~v~D~~t~~~~~~~~~~~~-----~-------~~va~sp 253 (301)
T d1l0qa2 206 --AVNPEGTKAYVTNVD------------------KYFNTVSMIDTGTNKITARIPVGPD-----P-------AGIAVTP 253 (301)
T ss_dssp --EECTTSSEEEEEEEC------------------SSCCEEEEEETTTTEEEEEEECCSS-----E-------EEEEECT
T ss_pred --ecccccccccccccc------------------ceeeeeeeeecCCCeEEEEEcCCCC-----E-------EEEEEeC
Confidence 289999988765421 1112488999998865443322211 1 1237899
Q ss_pred cCcEEEEEEecCCCCCeEEEEEcCCCcee
Q 011049 179 NQLKILTSKESKTEITQYHILSWPLKKSS 207 (494)
Q Consensus 179 d~~~~~~~~~s~~~p~~l~~~~~~~~~~~ 207 (494)
||++++++... -..|.++|+++++..
T Consensus 254 dg~~l~va~~~---~~~i~v~D~~t~~~~ 279 (301)
T d1l0qa2 254 DGKKVYVALSF---CNTVSVIDTATNTIT 279 (301)
T ss_dssp TSSEEEEEETT---TTEEEEEETTTTEEE
T ss_pred CCCEEEEEECC---CCeEEEEECCCCeEE
Confidence 99987765432 247888998877643
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.84 E-value=0.018 Score=50.75 Aligned_cols=142 Identities=6% Similarity=-0.052 Sum_probs=76.2
Q ss_pred CCccceeeeccCCCCCCCCCe---eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCce-Eeeecccc
Q 011049 14 VSPRDIIYTQPAEPAEGEKPE---ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPR-VLFDRVFE 89 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~---~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~-~lt~~~~~ 89 (494)
-+..+.|.++++ ..++.. .+..........+|+|||+.|+..+... ...+.+.+++.+ +.. .+...
T Consensus 76 g~~dg~i~iwd~---~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~--~~~~~v~~~~~~--~~~~~l~~h--- 145 (311)
T d1nr0a1 76 GDVHGNVRIWDT---TQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGR--ERFGHVFLFDTG--TSNGNLTGQ--- 145 (311)
T ss_dssp EETTSEEEEEES---SSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCS--SCSEEEEETTTC--CBCBCCCCC---
T ss_pred cccCceEeeeee---eccccccccccccccCccccccccccccccccccccc--cccccccccccc--ccccccccc---
Confidence 345678888888 444322 1222233445678999999888765321 122344455544 222 22111
Q ss_pred cccCCCCCC--ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeee
Q 011049 90 NVYSDPGSP--MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVAL 167 (494)
Q Consensus 90 ~~~~~~~~~--~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~ 167 (494)
..+ .+.|+|||..++..... ++ .+.++|+.+++.......... .+
T Consensus 146 ------~~~v~~v~~~~~~~~~l~sgs~-----------------d~---~i~i~d~~~~~~~~~~~~~~~-----~i-- 192 (311)
T d1nr0a1 146 ------ARAMNSVDFKPSRPFRIISGSD-----------------DN---TVAIFEGPPFKFKSTFGEHTK-----FV-- 192 (311)
T ss_dssp ------SSCEEEEEECSSSSCEEEEEET-----------------TS---CEEEEETTTBEEEEEECCCSS-----CE--
T ss_pred ------ccccccccccccceeeeccccc-----------------cc---ccccccccccccccccccccc-----cc--
Confidence 112 23489999875554321 11 378889888765544432211 00
Q ss_pred ccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCce
Q 011049 168 VFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKS 206 (494)
Q Consensus 168 ~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~ 206 (494)
....++|+++.++.... -..+.+++...++.
T Consensus 193 ----~~v~~~p~~~~l~~~~~----d~~v~~~d~~~~~~ 223 (311)
T d1nr0a1 193 ----HSVRYNPDGSLFASTGG----DGTIVLYNGVDGTK 223 (311)
T ss_dssp ----EEEEECTTSSEEEEEET----TSCEEEEETTTCCE
T ss_pred ----cccccCccccccccccc----cccccccccccccc
Confidence 12377888876654332 24577777766543
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.52 E-value=0.014 Score=52.08 Aligned_cols=121 Identities=11% Similarity=0.038 Sum_probs=68.9
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
..+.|.++++ ..++..............+|+|+++.|+..+. ...+.+.++..+ +...........
T Consensus 203 ~d~~v~i~d~---~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~----d~~i~i~d~~~~--~~~~~~~~~~~i----- 268 (337)
T d1gxra_ 203 LDNTVRSWDL---REGRQLQQHDFTSQIFSLGYCPTGEWLAVGME----SSNVEVLHVNKP--DKYQLHLHESCV----- 268 (337)
T ss_dssp TTSEEEEEET---TTTEEEEEEECSSCEEEEEECTTSSEEEEEET----TSCEEEEETTSS--CEEEECCCSSCE-----
T ss_pred cccccccccc---ccceeecccccccceEEEEEcccccccceecc----cccccccccccc--cccccccccccc-----
Confidence 3467788887 55544333333344456789999998875432 346777787765 322222111110
Q ss_pred CCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccc
Q 011049 96 GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEED 175 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~ 175 (494)
-.+.|+|||+.++.... ++ .|.++|..+++........+. . ....
T Consensus 269 --~~v~~s~~g~~l~s~s~------------------Dg---~i~iwd~~~~~~~~~~~~~~~-----v-------~~~~ 313 (337)
T d1gxra_ 269 --LSLKFAYCGKWFVSTGK------------------DN---LLNAWRTPYGASIFQSKESSS-----V-------LSCD 313 (337)
T ss_dssp --EEEEECTTSSEEEEEET------------------TS---EEEEEETTTCCEEEEEECSSC-----E-------EEEE
T ss_pred --ceEEECCCCCEEEEEeC------------------CC---eEEEEECCCCCEEEEccCCCC-----E-------EEEE
Confidence 12348999997765431 11 377888888765443332221 1 1237
Q ss_pred ccccCcEEEE
Q 011049 176 INLNQLKILT 185 (494)
Q Consensus 176 ~s~d~~~~~~ 185 (494)
|+||++.++.
T Consensus 314 ~s~d~~~l~t 323 (337)
T d1gxra_ 314 ISVDDKYIVT 323 (337)
T ss_dssp ECTTSCEEEE
T ss_pred EeCCCCEEEE
Confidence 8888876543
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=96.19 E-value=0.0025 Score=56.92 Aligned_cols=90 Identities=7% Similarity=-0.110 Sum_probs=53.0
Q ss_pred CCccceeeeccCCCCCCCCCeecccc--ccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc-
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEILHKL--DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN- 90 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~lt~~--~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~- 90 (494)
-+..+.|.++|+ +.++...-... .......+|||||+.|+..... ...|++.|+.++ +...........
T Consensus 14 ~~~~~~v~v~D~---~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~---~~~v~~~d~~t~--~~~~~~~~~~~~~ 85 (346)
T d1jmxb_ 14 TNYPNNLHVVDV---ASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH---YGDIYGIDLDTC--KNTFHANLSSVPG 85 (346)
T ss_dssp EETTTEEEEEET---TTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT---TTEEEEEETTTT--EEEEEEESCCSTT
T ss_pred EcCCCEEEEEEC---CCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECC---CCcEEEEeCccC--eeeeeeccccccc
Confidence 445678999999 66665432221 2234578999999987655322 457999999876 333222211111
Q ss_pred -ccCCCCCCceeeCCCCCEEEEEE
Q 011049 91 -VYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 91 -~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
....|.. +.+||||++++...
T Consensus 86 ~~~~~~~~--v~~s~DG~~l~v~~ 107 (346)
T d1jmxb_ 86 EVGRSMYS--FAISPDGKEVYATV 107 (346)
T ss_dssp EEEECSSC--EEECTTSSEEEEEE
T ss_pred ccCCceEE--EEEecCCCEEEEEe
Confidence 0011222 33899999887654
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.18 E-value=0.014 Score=52.90 Aligned_cols=22 Identities=23% Similarity=0.295 Sum_probs=19.0
Q ss_pred CcEEEEecChHHHHHHHHHHhC
Q 011049 344 SRIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 344 ~ri~i~G~S~GG~~a~~~~~~~ 365 (494)
++|-++||||||..+-+++..-
T Consensus 105 ~kVnLIgHS~GGld~Ryl~~~l 126 (388)
T d1ku0a_ 105 GRVHIIAHSQGGQTARMLVSLL 126 (388)
T ss_dssp CCEEEEEETTHHHHHHHHHHHH
T ss_pred CceeEeecccccHHHHHHHHHh
Confidence 5899999999999998887643
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.18 E-value=0.11 Score=45.76 Aligned_cols=138 Identities=8% Similarity=-0.050 Sum_probs=77.8
Q ss_pred cceeeeccCCCCCCCCCeecccc-ccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKL-DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~-~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
.+.|.++++ .+++....... .......+|+|||+.++..+. ...+.+.++..+ + .+.......
T Consensus 162 d~~i~~~~~---~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~----d~~v~i~d~~~~--~--~~~~~~~~~----- 225 (337)
T d1gxra_ 162 DGNIAVWDL---HNQTLVRQFQGHTDGASCIDISNDGTKLWTGGL----DNTVRSWDLREG--R--QLQQHDFTS----- 225 (337)
T ss_dssp TSCEEEEET---TTTEEEEEECCCSSCEEEEEECTTSSEEEEEET----TSEEEEEETTTT--E--EEEEEECSS-----
T ss_pred ccccccccc---ccccccccccccccccccccccccccccccccc----cccccccccccc--e--eeccccccc-----
Confidence 346777777 54544333222 233446789999998887542 346777788765 3 332222111
Q ss_pred CCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccc
Q 011049 96 GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEED 175 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~ 175 (494)
.-..+.|+|+|+.++.... .+ .+.++|+++++.......... . ....
T Consensus 226 ~i~~l~~~~~~~~l~~~~~------------------d~---~i~i~d~~~~~~~~~~~~~~~-----i-------~~v~ 272 (337)
T d1gxra_ 226 QIFSLGYCPTGEWLAVGME------------------SS---NVEVLHVNKPDKYQLHLHESC-----V-------LSLK 272 (337)
T ss_dssp CEEEEEECTTSSEEEEEET------------------TS---CEEEEETTSSCEEEECCCSSC-----E-------EEEE
T ss_pred ceEEEEEcccccccceecc------------------cc---ccccccccccccccccccccc-----c-------ceEE
Confidence 0012348999998876541 11 378888888765443322221 1 1237
Q ss_pred ccccCcEEEEEEecCCCCCeEEEEEcCCCcee
Q 011049 176 INLNQLKILTSKESKTEITQYHILSWPLKKSS 207 (494)
Q Consensus 176 ~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~ 207 (494)
|+|+++.++... . -..+.+++..+++..
T Consensus 273 ~s~~g~~l~s~s-~---Dg~i~iwd~~~~~~~ 300 (337)
T d1gxra_ 273 FAYCGKWFVSTG-K---DNLLNAWRTPYGASI 300 (337)
T ss_dssp ECTTSSEEEEEE-T---TSEEEEEETTTCCEE
T ss_pred ECCCCCEEEEEe-C---CCeEEEEECCCCCEE
Confidence 889988665432 2 246788887766543
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=95.93 E-value=0.044 Score=48.02 Aligned_cols=123 Identities=5% Similarity=0.014 Sum_probs=67.8
Q ss_pred cceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
.+.|.++|+ ..+++.. +..........+|+|||+.|+..+. ...+.+.++... .............
T Consensus 205 d~~v~i~d~---~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~----d~~i~~~~~~~~--~~~~~~~~~~~~~---- 271 (340)
T d1tbga_ 205 DASAKLWDV---REGMCRQTFTGHESDINAICFFPNGNAFATGSD----DATCRLFDLRAD--QELMTYSHDNIIC---- 271 (340)
T ss_dssp TTEEEEEET---TTTEEEEEECCCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTT--EEEEEECCTTCCS----
T ss_pred CceEEEEEC---CCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeC----CCeEEEEeeccc--ccccccccccccC----
Confidence 457888888 5454433 3333444556789999998776542 345677777654 3222222221110
Q ss_pred CCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccc
Q 011049 96 GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEED 175 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~ 175 (494)
.-..+.|+|||+.|+.... ++ .+.++|+.+++.......... .+ ....
T Consensus 272 ~i~~~~~s~~~~~l~~g~~------------------dg---~i~iwd~~~~~~~~~~~~H~~----~V-------~~l~ 319 (340)
T d1tbga_ 272 GITSVSFSKSGRLLLAGYD------------------DF---NCNVWDALKADRAGVLAGHDN----RV-------SCLG 319 (340)
T ss_dssp CEEEEEECSSSCEEEEEET------------------TS---CEEEEETTTCCEEEEECCCSS----CE-------EEEE
T ss_pred ceEEEEECCCCCEEEEEEC------------------CC---EEEEEECCCCcEEEEEcCCCC----CE-------EEEE
Confidence 1112458999997766541 12 288889888775544332111 01 1236
Q ss_pred ccccCcEEE
Q 011049 176 INLNQLKIL 184 (494)
Q Consensus 176 ~s~d~~~~~ 184 (494)
|+||+..++
T Consensus 320 ~s~d~~~l~ 328 (340)
T d1tbga_ 320 VTDDGMAVA 328 (340)
T ss_dssp ECTTSSCEE
T ss_pred EeCCCCEEE
Confidence 788887554
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.85 E-value=0.041 Score=50.98 Aligned_cols=136 Identities=11% Similarity=0.034 Sum_probs=74.1
Q ss_pred ccceecCCCceEEEEeeeec-cceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceE
Q 011049 44 RSVSWCDDSLALVNETWYKT-SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIY 122 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~-~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~ 122 (494)
.+..+||||+.++|+-+.+| ....|+++|+++| +....+-..... +. +.|++|++.++|+.......
T Consensus 128 ~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg--~~~~~~i~~~~~-----~~--~~W~~D~~~~~Y~~~~~~~~--- 195 (430)
T d1qfma1 128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGA--KELPDVLERVKF-----SC--MAWTHDGKGMFYNAYPQQDG--- 195 (430)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCEEEEEEETTTT--EEEEEEEEEECS-----CC--EEECTTSSEEEEEECCCCSS---
T ss_pred cceEecCCCCEEEEEeccccCchheeEEeccCcc--eecccccccccc-----cc--eEEcCCCCEEEEEEeccccC---
Confidence 35679999999999988665 5689999999988 322211111110 22 23999999999987421100
Q ss_pred EEEccCCCCCCCC-CCceEeeecCCCce--EEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCC-CCeEEE
Q 011049 123 ILLNGRGFTPEGN-IPFLDLFDINTGSK--ERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTE-ITQYHI 198 (494)
Q Consensus 123 ~~~~~~g~~~~~~-~~~l~~~d~~~g~~--~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~-p~~l~~ 198 (494)
..++...... ..+++++.+.+... ..++.......+ . .....+.|++.+++...+... -..+|.
T Consensus 196 ---~~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~---~------~~~~~s~d~~~l~i~~~~~~~~~~~~~~ 263 (430)
T d1qfma1 196 ---KSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKW---M------GGAELSDDGRYVLLSIREGCDPVNRLWY 263 (430)
T ss_dssp ---CCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTC---E------EEEEECTTSCEEEEEEECSSSSCCEEEE
T ss_pred ---cccccccccCCcceEEEEECCCCccccccccccccCCce---E------EeeeccCCcceeeEEeeccCCccEEEEE
Confidence 0011111111 23466666655432 234443211000 0 012457788887776655443 345777
Q ss_pred EEcCC
Q 011049 199 LSWPL 203 (494)
Q Consensus 199 ~~~~~ 203 (494)
.+...
T Consensus 264 ~d~~~ 268 (430)
T d1qfma1 264 CDLQQ 268 (430)
T ss_dssp EEGGG
T ss_pred eeCCC
Confidence 77543
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=95.78 E-value=0.028 Score=50.83 Aligned_cols=103 Identities=7% Similarity=-0.017 Sum_probs=58.2
Q ss_pred cccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCC--ceeeCCCCCEEEEEEeccCccc
Q 011049 43 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP--MMTRTSTGTNVIAKIKKENDEQ 120 (494)
Q Consensus 43 ~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~--~~~~spDG~~i~~~~~~~~~~~ 120 (494)
....+|||||+.|++.+. +..|.+.+++++ +.+++....+.. .+ .+.|||||++|+-...
T Consensus 10 It~~~~s~dg~~la~~~~----~~~i~iw~~~~~--~~~~~~~l~gH~------~~V~~l~fsp~~~~l~s~s~------ 71 (371)
T d1k8kc_ 10 ISCHAWNKDRTQIAICPN----NHEVHIYEKSGN--KWVQVHELKEHN------GQVTGVDWAPDSNRIVTCGT------ 71 (371)
T ss_dssp CCEEEECTTSSEEEEECS----SSEEEEEEEETT--EEEEEEEEECCS------SCEEEEEEETTTTEEEEEET------
T ss_pred eEEEEECCCCCEEEEEeC----CCEEEEEECCCC--CEEEEEEecCCC------CCEEEEEECCCCCEEEEEEC------
Confidence 346689999999887642 335666676665 444444332221 22 2348999998775431
Q ss_pred eEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEE
Q 011049 121 IYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSK 187 (494)
Q Consensus 121 ~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~ 187 (494)
+. .+.++|+++++.+......+.. ... ....|+|+++.++...
T Consensus 72 ------------D~---~i~vWd~~~~~~~~~~~~~~~~--~~v-------~~i~~~p~~~~l~~~s 114 (371)
T d1k8kc_ 72 ------------DR---NAYVWTLKGRTWKPTLVILRIN--RAA-------RCVRWAPNEKKFAVGS 114 (371)
T ss_dssp ------------TS---CEEEEEEETTEEEEEEECCCCS--SCE-------EEEEECTTSSEEEEEE
T ss_pred ------------CC---eEEEEeeccccccccccccccc--ccc-------cccccccccccceeec
Confidence 11 2777888777654443222110 001 1237888888766543
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=95.66 E-value=0.02 Score=50.37 Aligned_cols=82 Identities=11% Similarity=-0.023 Sum_probs=46.7
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEE
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYIL 124 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~ 124 (494)
.+.+||||+.++....... ...+|.++.+++ ..+......... .|.. +.|||||++++....
T Consensus 234 ~~~~s~d~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~---~p~~--~a~spDGk~l~va~~---------- 295 (333)
T d1ri6a_ 234 DIHITPDGRHLYACDRTAS-LITVFSVSEDGS--VLSKEGFQPTET---QPRG--FNVDHSGKYLIAAGQ---------- 295 (333)
T ss_dssp EEEECTTSSEEEEEETTTT-EEEEEEECTTSC--CEEEEEEEECSS---SCCC--EEECTTSSEEEEECT----------
T ss_pred eEEEecccCceeeecccCC-eEEEEEEcCCCC--EEEEEEEeCCCC---CeeE--EEEeCCCCEEEEEEC----------
Confidence 4679999998766543322 456777766654 323322222211 1222 349999998765421
Q ss_pred EccCCCCCCCCCCceEeeecCCCceEEE
Q 011049 125 LNGRGFTPEGNIPFLDLFDINTGSKERI 152 (494)
Q Consensus 125 ~~~~g~~~~~~~~~l~~~d~~~g~~~~l 152 (494)
.+....+|.+|.++|+.+++
T Consensus 296 --------~~~~v~v~~id~~tG~l~~~ 315 (333)
T d1ri6a_ 296 --------KSHHISVYEIVGEQGLLHEK 315 (333)
T ss_dssp --------TTCEEEEEEEETTTTEEEEE
T ss_pred --------CCCeEEEEEEECCCCcEEEE
Confidence 22223467778888876654
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.62 E-value=0.11 Score=48.35 Aligned_cols=147 Identities=11% Similarity=-0.024 Sum_probs=77.4
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCC---chhHHHHHhCCeEEEeCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMT---PTSSLIFLARRFAVLAGPS 305 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~G~~v~~~~~ 305 (494)
+...++..+..|++...+ ++. ..|+++++-|||.++.-.....--+|-.+..-. ......|....-.|+. |.
T Consensus 26 l~~~~~~~lffw~~~s~~-~~~---~~Pl~~wlnGGPG~SS~~g~~~e~GP~~v~~~~~~~~~N~~SW~~~anllfI-Dq 100 (452)
T d1ivya_ 26 LKSSGSKHLHYWFVESQK-DPE---NSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYL-ES 100 (452)
T ss_dssp EECSTTEEEEEEEECCSS-CGG---GSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEE-CC
T ss_pred eecCCCceEEEEEEEcCC-CCC---CCCEEEEECCCCcHHHHHHHHHccCCcEEcCCCCeeccCCcchhcccCEEEE-ec
Confidence 344567788888885543 232 279999999998544211000001111111000 0011122333333333 43
Q ss_pred CCCCCCCCCCC--CchhHHHHHHHHHHHH-HHHHHcCCCCCCcEEEEecChHHHHHHHHHHh---CC-CceeEEEeCCCC
Q 011049 306 IPIIGEGDKLP--NDRFVEQLVSSAEAAV-EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH---AP-HLFCCGIARSGS 378 (494)
Q Consensus 306 ~~~~g~g~~~~--~~~~~~~~~~d~~~~v-~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~---~p-~~~~a~v~~~~~ 378 (494)
.-..|+..... ......+...|+.+++ +++...+.....++.|+|.||||..+..++.. .+ =.+++++..+|+
T Consensus 101 PvGtGfS~~~~~~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~igng~ 180 (452)
T d1ivya_ 101 PAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 180 (452)
T ss_dssp STTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred CCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCCCc
Confidence 22234432211 1122234456665555 55555544555789999999999988777643 22 257899998888
Q ss_pred CC
Q 011049 379 YN 380 (494)
Q Consensus 379 ~~ 380 (494)
.+
T Consensus 181 ~d 182 (452)
T d1ivya_ 181 SS 182 (452)
T ss_dssp SB
T ss_pred cC
Confidence 65
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.47 E-value=0.058 Score=49.03 Aligned_cols=110 Identities=11% Similarity=-0.026 Sum_probs=58.6
Q ss_pred ccceeeeccCCCCCCCCCee-------ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccc
Q 011049 16 PRDIIYTQPAEPAEGEKPEI-------LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVF 88 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~-------lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~ 88 (494)
..+.|.++|+ ..+++.. +..........+|||||+.|+-.+..+. ...+.+.++..+ +.........
T Consensus 203 ~Dg~i~iwd~---~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t-~~~i~lwd~~~g--~~~~~l~~~~ 276 (393)
T d1sq9a_ 203 NNGTVQISEL---STLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS-FGCITLYETEFG--ERIGSLSVPT 276 (393)
T ss_dssp TTSEEEEEET---TTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETT-EEEEEEEETTTC--CEEEEECBC-
T ss_pred CCCcEEEEee---cccccccccccccccccccceEEEcccccccceeeeecCCCC-cceeeecccccc--eeeeeecccc
Confidence 4457888888 5554332 1222233456789999998877654332 345666677765 3332221111
Q ss_pred ccc-cC-C-C--CCC--ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEE
Q 011049 89 ENV-YS-D-P--GSP--MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI 152 (494)
Q Consensus 89 ~~~-~~-~-~--~~~--~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l 152 (494)
... .. . . ... .+.|||||+.|+-.. .+. .|.++|+++|+....
T Consensus 277 ~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s-------------------~D~--~v~vWd~~~g~~~~~ 326 (393)
T d1sq9a_ 277 HSSQASLGEFAHSSWVMSLSFNDSGETLCSAG-------------------WDG--KLRFWDVKTKERITT 326 (393)
T ss_dssp -------CCBSBSSCEEEEEECSSSSEEEEEE-------------------TTS--EEEEEETTTTEEEEE
T ss_pred ccccceeeeecccCceeeeccCCCCCeeEEEC-------------------CCC--EEEEEECCCCCEEEE
Confidence 000 00 0 0 111 245899999776543 111 388999999865443
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=95.39 E-value=0.22 Score=44.44 Aligned_cols=84 Identities=8% Similarity=0.034 Sum_probs=48.2
Q ss_pred CccceeeeccCCCCCCCCCeec---cccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccc
Q 011049 15 SPRDIIYTQPAEPAEGEKPEIL---HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV 91 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~l---t~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~ 91 (494)
+..+.|.++++ ++++.+.+ ..........+|||||+.|+-.+. ++ .+++-++.++ +.+........
T Consensus 26 ~~~~~i~iw~~---~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~-D~---~i~vWd~~~~--~~~~~~~~~~~-- 94 (371)
T d1k8kc_ 26 PNNHEVHIYEK---SGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT-DR---NAYVWTLKGR--TWKPTLVILRI-- 94 (371)
T ss_dssp CSSSEEEEEEE---ETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEET-TS---CEEEEEEETT--EEEEEEECCCC--
T ss_pred eCCCEEEEEEC---CCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEEC-CC---eEEEEeeccc--ccccccccccc--
Confidence 44567888888 66654433 333445567889999998775432 22 3444444444 33333222211
Q ss_pred cCCCCCC--ceeeCCCCCEEEEEE
Q 011049 92 YSDPGSP--MMTRTSTGTNVIAKI 113 (494)
Q Consensus 92 ~~~~~~~--~~~~spDG~~i~~~~ 113 (494)
..+ .+.|+|||+.++...
T Consensus 95 ----~~~v~~i~~~p~~~~l~~~s 114 (371)
T d1k8kc_ 95 ----NRAARCVRWAPNEKKFAVGS 114 (371)
T ss_dssp ----SSCEEEEEECTTSSEEEEEE
T ss_pred ----cccccccccccccccceeec
Confidence 112 234999999887765
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=95.38 E-value=0.15 Score=44.24 Aligned_cols=111 Identities=10% Similarity=0.009 Sum_probs=60.7
Q ss_pred ceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeec
Q 011049 65 QTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDI 144 (494)
Q Consensus 65 ~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~ 144 (494)
.++|.++|+.++ +..... ...+....|.. +.+||||++++..... .+ .|.++|+
T Consensus 10 d~~v~v~D~~s~--~~~~~i--~~~~~~~~~~~--i~~spDg~~l~v~~~~-----------------~~---~v~v~D~ 63 (337)
T d1pbyb_ 10 PDKLVVIDTEKM--AVDKVI--TIADAGPTPMV--PMVAPGGRIAYATVNK-----------------SE---SLVKIDL 63 (337)
T ss_dssp TTEEEEEETTTT--EEEEEE--ECTTCTTCCCC--EEECTTSSEEEEEETT-----------------TT---EEEEEET
T ss_pred CCEEEEEECCCC--eEEEEE--ECCCCCCCccE--EEECCCCCEEEEEECC-----------------CC---eEEEEEC
Confidence 468999999876 333222 21111112233 3489999987665311 11 3899999
Q ss_pred CCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCC--------CCCeEEEEEcCCCcee
Q 011049 145 NTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKT--------EITQYHILSWPLKKSS 207 (494)
Q Consensus 145 ~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~--------~p~~l~~~~~~~~~~~ 207 (494)
++++........... ..........++||++.++....... .+..+.+++..+++..
T Consensus 64 ~t~~~~~~~~~~~~~------~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 128 (337)
T d1pbyb_ 64 VTGETLGRIDLSTPE------ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR 128 (337)
T ss_dssp TTCCEEEEEECCBTT------EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE
T ss_pred CCCcEEEEEecCCCc------ccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEE
Confidence 998765433322110 00011123478999988877654321 2345677777665543
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=95.22 E-value=0.22 Score=43.60 Aligned_cols=148 Identities=6% Similarity=-0.003 Sum_probs=77.1
Q ss_pred ccceeeeccCCCCCCCCCeecc-----------ccccccccceecCCCceEEEEeeee-ccceEEEEEcCCCCCCCceEe
Q 011049 16 PRDIIYTQPAEPAEGEKPEILH-----------KLDLRFRSVSWCDDSLALVNETWYK-TSQTRTWLVCPGSKDVAPRVL 83 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt-----------~~~~~~~~p~wspDg~~i~f~~~~~-~~~~~~~~~~~~~g~~~~~~l 83 (494)
..|+||+.|+ .+++..++. .........+++|||+.++ ....+ .....++.++..++ ....+
T Consensus 49 ~~G~Ly~~D~---~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~v-a~~~~~~~~~~i~~~~~~~~--~~~~~ 122 (319)
T d2dg1a1 49 RQGQLFLLDV---FEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFV-CYLGDFKSTGGIFAATENGD--NLQDI 122 (319)
T ss_dssp TTSCEEEEET---TTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEE-EECTTSSSCCEEEEECTTSC--SCEEE
T ss_pred CCCCEEEEEC---CCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEE-EecCCCccceeEEEEcCCCc--eeeee
Confidence 3566777776 444433332 1122233567999997433 22211 12456888887776 44444
Q ss_pred eecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhh
Q 011049 84 FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFET 163 (494)
Q Consensus 84 t~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~ 163 (494)
........ .|.. +...|||+ +++.... +.. ......+++++.+++..+.+...-..
T Consensus 123 ~~~~~~~~--~~nd--~~~d~~G~-l~vtd~~-------------~~~-~~~~g~v~~~~~dg~~~~~~~~~~~~----- 178 (319)
T d2dg1a1 123 IEDLSTAY--CIDD--MVFDSKGG-FYFTDFR-------------GYS-TNPLGGVYYVSPDFRTVTPIIQNISV----- 178 (319)
T ss_dssp ECSSSSCC--CEEE--EEECTTSC-EEEEECC-------------CBT-TBCCEEEEEECTTSCCEEEEEEEESS-----
T ss_pred ccCCCccc--CCcc--eeEEeccc-eeecccc-------------ccc-ccCcceeEEEecccceeEEEeeccce-----
Confidence 43222110 1111 22689996 6555421 111 11122488888887766665442111
Q ss_pred eeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 164 AVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 164 ~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
-+...|++|++++++.... ...|++++++.
T Consensus 179 -------pnGia~s~dg~~lyvad~~---~~~I~~~d~~~ 208 (319)
T d2dg1a1 179 -------ANGIALSTDEKVLWVTETT---ANRLHRIALED 208 (319)
T ss_dssp -------EEEEEECTTSSEEEEEEGG---GTEEEEEEECT
T ss_pred -------eeeeeeccccceEEEeccc---CCceEEEEEcC
Confidence 0123789999888776432 34688887643
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=94.59 E-value=0.15 Score=44.13 Aligned_cols=86 Identities=15% Similarity=0.032 Sum_probs=50.9
Q ss_pred eecccccccc-ccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEE
Q 011049 34 EILHKLDLRF-RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAK 112 (494)
Q Consensus 34 ~~lt~~~~~~-~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~ 112 (494)
+.+....... .+|.|.++.+.|+|+- -.+.+|++++++++ +.+. ...+... . .+.+.+||+.++ .
T Consensus 10 ~~~~~~~~~LgEgp~wd~~~~~l~wvD---i~~~~I~r~d~~~g--~~~~-~~~~~~~-----~--~i~~~~dg~l~v-a 75 (295)
T d2ghsa1 10 RVLDETPMLLGEGPTFDPASGTAWWFN---ILERELHELHLASG--RKTV-HALPFMG-----S--ALAKISDSKQLI-A 75 (295)
T ss_dssp EEEECSCCSBEEEEEEETTTTEEEEEE---GGGTEEEEEETTTT--EEEE-EECSSCE-----E--EEEEEETTEEEE-E
T ss_pred EEEcCCCCeeeeCCeEECCCCEEEEEE---CCCCEEEEEECCCC--eEEE-EECCCCc-----E--EEEEecCCCEEE-E
Confidence 4444443333 3799999888888863 23568999999987 4332 2222111 1 122556775333 2
Q ss_pred EeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEee
Q 011049 113 IKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES 155 (494)
Q Consensus 113 ~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~ 155 (494)
. .. .|+++|.++++.+.+...
T Consensus 76 ~-------------------~~---gl~~~d~~tg~~~~l~~~ 96 (295)
T d2ghsa1 76 S-------------------DD---GLFLRDTATGVLTLHAEL 96 (295)
T ss_dssp E-------------------TT---EEEEEETTTCCEEEEECS
T ss_pred E-------------------eC---ccEEeecccceeeEEeee
Confidence 2 11 388999999988776653
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.39 E-value=0.5 Score=43.10 Aligned_cols=142 Identities=9% Similarity=-0.009 Sum_probs=70.1
Q ss_pred CceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCc--hhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 234 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTP--TSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 234 g~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
+..+..|++...+ ++.+ .|+|+|+-|||.++.-.....--+|-.+..-.. .....|....- ++.++..-..|+
T Consensus 27 ~~~lfyw~~~s~~-~~~~---~Pl~~WlnGGPG~SS~~g~~~e~GP~~i~~~~~~~~N~~sW~~~an-llfiD~PvGtGf 101 (421)
T d1wpxa1 27 DKHFFFWTFESRN-DPAK---DPVILWLNGGPGCSSLTGLFFELGPSSIGPDLKPIGNPYSWNSNAT-VIFLDQPVNVGF 101 (421)
T ss_dssp CCEEEEEEECCSS-CTTT---SCEEEEECCTTTBCTHHHHHHTTSSEEECTTSCEEECTTCGGGSSE-EEEECCSTTSTT
T ss_pred CceEEEEEEEeCC-CCCC---CCEEEEECCCCcHHHHHHHHHhcCCcEECCCCccccCCcccccccC-EEEEecCCCCCc
Confidence 4578777775443 3333 699999999985442110000001111100000 00112223332 333343223344
Q ss_pred CCCCCC-chhHHHHHHHHHHHHHHHHHc-CCC--CCCcEEEEecChHHHHHHHHHHh---CC---CceeEEEeCCCCCC
Q 011049 312 GDKLPN-DRFVEQLVSSAEAAVEEVVRR-GVA--DPSRIAVGGHSYGAFMTAHLLAH---AP---HLFCCGIARSGSYN 380 (494)
Q Consensus 312 g~~~~~-~~~~~~~~~d~~~~v~~l~~~-~~~--d~~ri~i~G~S~GG~~a~~~~~~---~p---~~~~a~v~~~~~~~ 380 (494)
...... ...-.....|+..++....+. +.. ....+.|+|.||||..+..+|.. .. -.+++++...|+.+
T Consensus 102 Sy~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iGng~~d 180 (421)
T d1wpxa1 102 SYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLTD 180 (421)
T ss_dssp CBCSSCCCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEESCCCC
T ss_pred eecCCccccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEecCCccc
Confidence 322111 111234456666666544443 322 23579999999999877766532 22 24689999888876
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=94.31 E-value=0.15 Score=44.70 Aligned_cols=44 Identities=7% Similarity=-0.086 Sum_probs=27.4
Q ss_pred CCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCC
Q 011049 29 EGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 75 (494)
Q Consensus 29 ~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~ 75 (494)
+++..+.+...-..-.+++|||||+.|+++.. ...+||+++++.
T Consensus 165 dg~~~~~~~~~~~~pnGia~s~dg~~lyvad~---~~~~I~~~d~~~ 208 (319)
T d2dg1a1 165 DFRTVTPIIQNISVANGIALSTDEKVLWVTET---TANRLHRIALED 208 (319)
T ss_dssp TSCCEEEEEEEESSEEEEEECTTSSEEEEEEG---GGTEEEEEEECT
T ss_pred ccceeEEEeeccceeeeeeeccccceEEEecc---cCCceEEEEEcC
Confidence 44444444433223346799999998777632 246899998764
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=94.30 E-value=0.076 Score=48.79 Aligned_cols=116 Identities=9% Similarity=-0.123 Sum_probs=61.9
Q ss_pred ecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCC-ceeeCCCCCEEEEEEeccCccceEEEEc
Q 011049 48 WCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP-MMTRTSTGTNVIAKIKKENDEQIYILLN 126 (494)
Q Consensus 48 wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~-~~~~spDG~~i~~~~~~~~~~~~~~~~~ 126 (494)
.+|||++|+.. +.. +++|.++|+++. +...+.+-+.. ..| -+++||||+++++..... ..+.+.
T Consensus 79 gtpDGr~lfV~-d~~--~~rVavIDl~t~--k~~~ii~iP~g------~gphgi~~spdg~t~YV~~~~~----~~v~~~ 143 (441)
T d1qnia2 79 GRYDGKYLFIN-DKA--NTRVARIRLDIM--KTDKITHIPNV------QAIHGLRLQKVPKTNYVFCNAE----FVIPQP 143 (441)
T ss_dssp TEEEEEEEEEE-ETT--TTEEEEEETTTT--EEEEEEECTTC------CCEEEEEECCSSBCCEEEEEEC----SCEESS
T ss_pred ccCCCCEEEEE-cCC--CCEEEEEECCCC--cEeeEEecCCC------CCccceEEeccCCEEEEEeccC----Cccccc
Confidence 57999996543 332 568999999987 66665543311 122 134899999776544321 112222
Q ss_pred cCCCCCCCC--CCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecC
Q 011049 127 GRGFTPEGN--IPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESK 190 (494)
Q Consensus 127 ~~g~~~~~~--~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~ 190 (494)
.+|...... ...+..+|.++.+.......++. -....++|||+++++++...
T Consensus 144 ~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~v~~~------------p~~v~~spdGk~a~vt~~ns 197 (441)
T d1qnia2 144 NDGTDFSLDNSYTMFTAIDAETMDVAWQVIVDGN------------LDNTDADYTGKYATSTCYNS 197 (441)
T ss_dssp CSSSCCCGGGEEEEEEEEETTTCSEEEEEEESSC------------CCCEEECSSSSEEEEEESCT
T ss_pred CcccccccccccceEEeecCccceeeEEEecCCC------------ccceEECCCCCEEEEEecCC
Confidence 233221111 11234567776554322111211 12348899999888876543
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=94.12 E-value=0.29 Score=45.71 Aligned_cols=63 Identities=16% Similarity=0.105 Sum_probs=43.6
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHH--------hC--------------------C-----CcEEEEEcCCCCCc
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALK--------GH--------------------G-----ALSRLVLLPFEHHV 461 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~--------~~--------------------g-----~~~~~~~~~~~~H~ 461 (494)
..++||.+|..|..|+ ...++.+.+.|. +. | ....+.++.++||.
T Consensus 372 girVLIy~Gd~D~icn--~~Gte~~i~~L~w~g~~~f~~~~~~~~w~~~~~~~~~~~~vaG~~~~~~nltf~~V~~AGHm 449 (483)
T d1ac5a_ 372 GIEIVLFNGDKDLICN--NKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHM 449 (483)
T ss_dssp TCEEEEEEETTCSTTC--HHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSS
T ss_pred CCEEEEEECChhhcCC--CHHHHHHHHhCCCccccccccCccccccccccccccCCcEEEEEEEEeCCeEEEEECCcccc
Confidence 3689999999999988 889999998874 10 0 14678888999997
Q ss_pred cCCcccHHHHHHHHHHHHH
Q 011049 462 YAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 462 ~~~~~~~~~~~~~~~~fl~ 480 (494)
.. ...+...++.+.+||.
T Consensus 450 vP-~dqP~~a~~mi~~fl~ 467 (483)
T d1ac5a_ 450 VP-FDKSLVSRGIVDIYSN 467 (483)
T ss_dssp HH-HHCHHHHHHHHHHHTT
T ss_pred Cc-ccCHHHHHHHHHHHhC
Confidence 53 2333344444444443
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.11 E-value=0.7 Score=38.99 Aligned_cols=140 Identities=11% Similarity=0.039 Sum_probs=76.2
Q ss_pred eeeeccCCCCCCCCCeeccccc-cccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 19 IIYTQPAEPAEGEKPEILHKLD-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~~~-~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
.|++.++ +|...+.+.... ..-...+..|....|+++.. .. ...|++.+++|. ..+.+..+... .|..
T Consensus 100 ~I~v~~~---~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~-~~-~~~I~r~~~dGs--~~~~l~~~~~~----~p~g 168 (266)
T d1ijqa1 100 TVSVADT---KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDW-GT-PAKIKKGGLNGV--DIYSLVTENIQ----WPNG 168 (266)
T ss_dssp EEEEEET---TSSSEEEEEECTTCCEEEEEEETTTTEEEEEEC-SS-SCEEEEEETTSC--CEEEEECSSCS----CEEE
T ss_pred EEEeEec---CCceEEEEEcCCCCCcceEEEEcccCeEEEecc-CC-CcceeEeccCCC--ceecccccccc----eeeE
Confidence 5555555 555544444332 22335566776667776532 22 568999999986 55666543211 1121
Q ss_pred CceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccccc
Q 011049 98 PMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDIN 177 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s 177 (494)
+.+.+++++|++.-. ....|..+++++...+.+....... .....++
T Consensus 169 --l~iD~~~~~lYw~d~--------------------~~~~I~~~~~dG~~~~~~~~~~~~~-----------~~p~~la 215 (266)
T d1ijqa1 169 --ITLDLLSGRLYWVDS--------------------KLHSISSIDVNGGNRKTILEDEKRL-----------AHPFSLA 215 (266)
T ss_dssp --EEEETTTTEEEEEET--------------------TTTEEEEEETTSCSCEEEEECTTTT-----------SSEEEEE
T ss_pred --EEeeccccEEEEecC--------------------CcCEEEEEECCCCCEEEEEeCCCcc-----------cccEEEE
Confidence 226777888877631 1124888888887655554432210 0011344
Q ss_pred ccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 178 LNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 178 ~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
.+++.++++... ...|++++..+++
T Consensus 216 v~~~~ly~td~~---~~~I~~~~~~~g~ 240 (266)
T d1ijqa1 216 VFEDKVFWTDII---NEAIFSANRLTGS 240 (266)
T ss_dssp EETTEEEEEETT---TTEEEEEETTTCC
T ss_pred EECCEEEEEECC---CCeEEEEECCCCc
Confidence 556666665432 3567877765554
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=94.10 E-value=0.11 Score=46.83 Aligned_cols=63 Identities=10% Similarity=0.006 Sum_probs=32.0
Q ss_pred ccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEE
Q 011049 44 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAK 112 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~ 112 (494)
++..|||||++++.. +.. ...|++++.+.. +....+...........|.. +.++|||++++..
T Consensus 148 h~v~~sPdG~~l~v~-d~g--~d~v~~~~~~~~-g~~~~~~~~~~~~~g~gPr~--i~f~pdg~~~yv~ 210 (365)
T d1jofa_ 148 HGMVFDPTETYLYSA-DLT--ANKLWTHRKLAS-GEVELVGSVDAPDPGDHPRW--VAMHPTGNYLYAL 210 (365)
T ss_dssp EEEEECTTSSEEEEE-ETT--TTEEEEEEECTT-SCEEEEEEEECSSTTCCEEE--EEECTTSSEEEEE
T ss_pred eEEEECCCCCEEEEe-eCC--CCEEEEEEccCC-CceeeccceeecCCCCceEE--EEECCCCceEEEe
Confidence 467899999987654 332 356777765432 12222211111110111222 3389999866544
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.99 E-value=0.45 Score=42.66 Aligned_cols=129 Identities=8% Similarity=0.013 Sum_probs=64.1
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCc--eeeCCCCCEEEEEEeccCccceE
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPM--MTRTSTGTNVIAKIKKENDEQIY 122 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~--~~~spDG~~i~~~~~~~~~~~~~ 122 (494)
..+||||| .| ++... ...|.+.++..+ ........... ...-..++ +.|||||+.|+..+..
T Consensus 189 ~v~~s~dg-~l-asgs~---Dg~i~iwd~~~~--~~~~~~~~~~~--l~~h~~~V~~l~~spdg~~l~sgs~D------- 252 (393)
T d1sq9a_ 189 SVDISERG-LI-ATGFN---NGTVQISELSTL--RPLYNFESQHS--MINNSNSIRSVKFSPQGSLLAIAHDS------- 252 (393)
T ss_dssp EEEECTTS-EE-EEECT---TSEEEEEETTTT--EEEEEEECCC-----CCCCCEEEEEECSSTTEEEEEEEE-------
T ss_pred EEEECCCC-EE-EEEeC---CCcEEEEeeccc--ccccccccccc--cccccceEEEcccccccceeeeecCC-------
Confidence 46899998 33 33333 345666677765 33222221111 00112332 4589999988766521
Q ss_pred EEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcc-----hhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEE
Q 011049 123 ILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNRE-----KYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYH 197 (494)
Q Consensus 123 ~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~-----~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~ 197 (494)
.....+.++|+++++.......... ..+.++... -....|+||++.++ +.+. -..|.
T Consensus 253 -----------~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~---V~~l~fspd~~~l~-S~s~---D~~v~ 314 (393)
T d1sq9a_ 253 -----------NSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW---VMSLSFNDSGETLC-SAGW---DGKLR 314 (393)
T ss_dssp -----------TTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC---EEEEEECSSSSEEE-EEET---TSEEE
T ss_pred -----------CCcceeeecccccceeeeeeccccccccceeeeecccCc---eeeeccCCCCCeeE-EECC---CCEEE
Confidence 1111366778888765443322111 000000000 01247899987654 3322 25688
Q ss_pred EEEcCCCcee
Q 011049 198 ILSWPLKKSS 207 (494)
Q Consensus 198 ~~~~~~~~~~ 207 (494)
+++.++++..
T Consensus 315 vWd~~~g~~~ 324 (393)
T d1sq9a_ 315 FWDVKTKERI 324 (393)
T ss_dssp EEETTTTEEE
T ss_pred EEECCCCCEE
Confidence 8888877543
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.67 E-value=0.72 Score=39.48 Aligned_cols=99 Identities=13% Similarity=-0.040 Sum_probs=50.7
Q ss_pred ccceeeeccCCCCCCCCCeecccc-ccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKL-DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~-~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
..+.|.++++ ..++....... .... -.++++++.|+..+ . ...|.+.++... +...........
T Consensus 195 ~dg~i~~~d~---~~~~~~~~~~~~~~~v--~~~~~~~~~l~s~s-~---d~~i~iwd~~~~--~~~~~~~~~~~~---- 259 (342)
T d2ovrb2 195 LDTSIRVWDV---ETGNCIHTLTGHQSLT--SGMELKDNILVSGN-A---DSTVKIWDIKTG--QCLQTLQGPNKH---- 259 (342)
T ss_dssp TTSCEEEEET---TTCCEEEEECCCCSCE--EEEEEETTEEEEEE-T---TSCEEEEETTTC--CEEEEECSTTSC----
T ss_pred CCCeEEEeec---ccceeeeEecccccce--eEEecCCCEEEEEc-C---CCEEEEEecccc--ccccccccccee----
Confidence 3467788887 55554332222 2222 24556666655433 2 345777777654 333332222111
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEE
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKER 151 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~ 151 (494)
...+.+++++++.++... . ++ .|.++|+++|+..+
T Consensus 260 -~~~~~~~~~~~~~~~s~s-------------~-----Dg---~i~iwd~~tg~~i~ 294 (342)
T d2ovrb2 260 -QSAVTCLQFNKNFVITSS-------------D-----DG---TVKLWDLKTGEFIR 294 (342)
T ss_dssp -SSCEEEEEECSSEEEEEE-------------T-----TS---EEEEEETTTCCEEE
T ss_pred -eeceeecccCCCeeEEEc-------------C-----CC---EEEEEECCCCCEEE
Confidence 233444566776655433 1 11 38889999887543
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=93.59 E-value=0.14 Score=44.98 Aligned_cols=52 Identities=10% Similarity=0.185 Sum_probs=30.3
Q ss_pred ceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 138 FLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 138 ~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
+|+++|.++++.......++. .. ....|.+|+++++++... ...||++++..
T Consensus 248 ~I~~~dp~~g~~~~~i~~p~~----~~-------t~~afg~d~~~lyVt~~~---~g~i~~~~~~~ 299 (314)
T d1pjxa_ 248 HIEVFGPDGGQPKMRIRCPFE----KP-------SNLHFKPQTKTIFVTEHE---NNAVWKFEWQR 299 (314)
T ss_dssp EEEEECTTCBSCSEEEECSSS----CE-------EEEEECTTSSEEEEEETT---TTEEEEEECSS
T ss_pred EEEEEeCCCCEEEEEEECCCC----CE-------EEEEEeCCCCEEEEEECC---CCcEEEEECCC
Confidence 488888887765433332221 00 123677888877776532 35788887643
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=93.35 E-value=0.21 Score=42.75 Aligned_cols=84 Identities=7% Similarity=0.037 Sum_probs=47.8
Q ss_pred CccceeeeccCCCCCCCCCeec--cccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEee-ecccccc
Q 011049 15 SPRDIIYTQPAEPAEGEKPEIL--HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF-DRVFENV 91 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~l--t~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt-~~~~~~~ 91 (494)
+..+.|.++|+ .+++...+ ..........+|+|||+.|+..+. ...+++.++..+ ...... .....
T Consensus 155 ~~dg~i~~~d~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----d~~i~~~~~~~~--~~~~~~~~~~~h-- 223 (299)
T d1nr0a2 155 GQDSKVHVYKL---SGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQ----SRKVIPYSVANN--FELAHTNSWTFH-- 223 (299)
T ss_dssp ETTSEEEEEEE---ETTEEEEEEEEECSSCEEEEEECTTSSEEEEEET----TSCEEEEEGGGT--TEESCCCCCCCC--
T ss_pred ccccccccccc---cccccccccccccccccccccccccccccccccc----cccccccccccc--cccccccccccc--
Confidence 34567888887 55554432 223344556789999998776432 345777777654 211111 11111
Q ss_pred cCCCCCCc--eeeCCCCCEEEEEE
Q 011049 92 YSDPGSPM--MTRTSTGTNVIAKI 113 (494)
Q Consensus 92 ~~~~~~~~--~~~spDG~~i~~~~ 113 (494)
..++ +.|+|||+.++...
T Consensus 224 ----~~~v~~l~~s~~~~~l~sgs 243 (299)
T d1nr0a2 224 ----TAKVACVSWSPDNVRLATGS 243 (299)
T ss_dssp ----SSCEEEEEECTTSSEEEEEE
T ss_pred ----ccccccccccccccceEEEc
Confidence 2232 34899999887654
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.28 E-value=0.43 Score=42.33 Aligned_cols=54 Identities=13% Similarity=-0.030 Sum_probs=28.8
Q ss_pred ccceeeeccCCCCCCCCCee-cc-------ccccccccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEI-LH-------KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~-lt-------~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
..+.|++++. ..+.... +. ..........|+|||+.|+..+. ...+.+.++..+
T Consensus 225 ~d~~i~i~~~---~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~----d~~i~iwd~~~~ 286 (388)
T d1erja_ 225 LDRAVRVWDS---ETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL----DRSVKLWNLQNA 286 (388)
T ss_dssp TTSCEEEEET---TTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEET----TSEEEEEEC---
T ss_pred CCCeEEEeec---ccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEEC----CCcEEEEeccCC
Confidence 3456778877 4443322 11 11233456789999998775432 334555565543
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=93.19 E-value=0.41 Score=40.74 Aligned_cols=119 Identities=7% Similarity=-0.012 Sum_probs=61.2
Q ss_pred cccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceE
Q 011049 43 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIY 122 (494)
Q Consensus 43 ~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~ 122 (494)
....+|+||++.|+..+ ....+.+.++.++ +...+....... .-..+.|+|||+.++....
T Consensus 139 ~~~~~~s~~~~~l~~g~----~dg~i~~~d~~~~--~~~~~~~~~~~~-----~i~~~~~~~~~~~l~~~~~-------- 199 (299)
T d1nr0a2 139 SSCVALSNDKQFVAVGG----QDSKVHVYKLSGA--SVSEVKTIVHPA-----EITSVAFSNNGAFLVATDQ-------- 199 (299)
T ss_dssp EEEEEECTTSCEEEEEE----TTSEEEEEEEETT--EEEEEEEEECSS-----CEEEEEECTTSSEEEEEET--------
T ss_pred ccccccccccccccccc----ccccccccccccc--cccccccccccc-----ccccccccccccccccccc--------
Confidence 34567999999877643 2446777777665 333322211110 0012348999998776541
Q ss_pred EEEccCCCCCCCCCCceEeeecCCCceEEEEee-CcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEc
Q 011049 123 ILLNGRGFTPEGNIPFLDLFDINTGSKERIWES-NREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSW 201 (494)
Q Consensus 123 ~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~-~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~ 201 (494)
++ .+.++|+.++........ .+. ...+ ....|+|++..++.... -..+.++++
T Consensus 200 ----------d~---~i~~~~~~~~~~~~~~~~~~~h---~~~v------~~l~~s~~~~~l~sgs~----dg~i~iwd~ 253 (299)
T d1nr0a2 200 ----------SR---KVIPYSVANNFELAHTNSWTFH---TAKV------ACVSWSPDNVRLATGSL----DNSVIVWNM 253 (299)
T ss_dssp ----------TS---CEEEEEGGGTTEESCCCCCCCC---SSCE------EEEEECTTSSEEEEEET----TSCEEEEET
T ss_pred ----------cc---cccccccccccccccccccccc---cccc------ccccccccccceEEEcC----CCEEEEEEC
Confidence 11 277777766543211110 000 0000 12368888876654322 245777887
Q ss_pred CCCce
Q 011049 202 PLKKS 206 (494)
Q Consensus 202 ~~~~~ 206 (494)
.+.+.
T Consensus 254 ~~~~~ 258 (299)
T d1nr0a2 254 NKPSD 258 (299)
T ss_dssp TCTTS
T ss_pred CCCCc
Confidence 66543
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=92.91 E-value=0.08 Score=45.10 Aligned_cols=41 Identities=24% Similarity=0.229 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 322 EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 322 ~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
.....++...++.+++... ..+|.+.|||+||.+|..++..
T Consensus 113 ~~~~~~i~~~v~~~~~~~~--~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 113 EQVVNDYFPVVQEQLTAHP--TYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHHHHHHHHHHHHHHHCT--TCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCC--CceEEEEecccchHHHHHHHHH
Confidence 3445666667766655431 3689999999999999877753
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=92.34 E-value=0.095 Score=44.79 Aligned_cols=41 Identities=22% Similarity=0.263 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 322 EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 322 ~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
.....++...++.+.++. ...+|.++|||+||.+|..++..
T Consensus 117 ~~~~~~i~~~i~~~~~~~--~~~~i~iTGHSLGGAlA~L~a~~ 157 (271)
T d1tiaa_ 117 KLVRDDIIKELKEVVAQN--PNYELVVVGHSLGAAVATLAATD 157 (271)
T ss_pred HHHHHHHHHHHHHHHHhC--CCceEEEeccchHHHHHHHHHHH
Confidence 334556666666665543 13589999999999999877664
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.20 E-value=1.9 Score=36.00 Aligned_cols=138 Identities=9% Similarity=0.059 Sum_probs=70.9
Q ss_pred eeeeccCCCCCCCCCeeccccc-cccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 19 IIYTQPAEPAEGEKPEILHKLD-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~~~-~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
.|.+.++ +|...+.|.... ......+.-|....|+++..... ...|++++++|. ..+.+..... ..
T Consensus 102 ~I~~~~~---dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~-~~~I~r~~~dG~--~~~~i~~~~~-------~~ 168 (263)
T d1npea_ 102 RIEVAKM---DGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRD-NPKIETSHMDGT--NRRILAQDNL-------GL 168 (263)
T ss_dssp EEEEEET---TSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSS-SCEEEEEETTSC--CCEEEECTTC-------SC
T ss_pred EEEEEec---CCceEEEEecccccCCcEEEEecccCcEEEeecCCC-CcEEEEecCCCC--Cceeeeeecc-------cc
Confidence 4444444 444444443332 22335567777777776543222 457999999986 5555543221 22
Q ss_pred C-ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 98 P-MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 98 ~-~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
| -+...+.+.+|++.-.. ...+.+++++++..+.+...... ...+
T Consensus 169 P~glaiD~~~~~lYw~d~~--------------------~~~I~~~~~~g~~~~~v~~~~~~--------------P~~l 214 (263)
T d1npea_ 169 PNGLTFDAFSSQLCWVDAG--------------------THRAECLNPAQPGRRKVLEGLQY--------------PFAV 214 (263)
T ss_dssp EEEEEEETTTTEEEEEETT--------------------TTEEEEEETTEEEEEEEEECCCS--------------EEEE
T ss_pred cceEEEeecCcEEEEEeCC--------------------CCEEEEEECCCCCeEEEECCCCC--------------cEEE
Confidence 2 12256667777665311 11377778777655444322111 0133
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCce
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKS 206 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~ 206 (494)
+.++++++++... ...|++++..+++.
T Consensus 215 av~~~~lYwtd~~---~~~I~~~~~~~g~~ 241 (263)
T d1npea_ 215 TSYGKNLYYTDWK---TNSVIAMDLAISKE 241 (263)
T ss_dssp EEETTEEEEEETT---TTEEEEEETTTTEE
T ss_pred EEECCEEEEEECC---CCEEEEEECCCCcc
Confidence 3445566555432 34577777665544
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=92.13 E-value=0.11 Score=44.25 Aligned_cols=41 Identities=24% Similarity=0.337 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 322 EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 322 ~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
....+++...++.++++.. .-+|.++|||+||.+|..++..
T Consensus 118 ~~~~~~v~~~v~~~~~~~~--~~~i~vtGHSLGGalA~l~a~~ 158 (269)
T d1tiba_ 118 RSVADTLRQKVEDAVREHP--DYRVVFTGHSLGGALATVAGAD 158 (269)
T ss_dssp HHHHHHHHHHHHHHHHHCT--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCC--CcceeeeccchHHHHHHHHHHH
Confidence 3445566667766665531 2589999999999999888764
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=92.06 E-value=0.93 Score=38.90 Aligned_cols=163 Identities=12% Similarity=0.042 Sum_probs=75.7
Q ss_pred cCCCC--CCCCCccceeeeccCCCC------CCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCC
Q 011049 6 DRGDA--NVEVSPRDIIYTQPAEPA------EGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKD 77 (494)
Q Consensus 6 ~~~~~--~~~~~~~~~i~~~~~~~~------~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~ 77 (494)
+.++| ..-+...|+||+.+...- .+++.+.+..........+|+|||+ +++.... ...+++++..+..
T Consensus 25 p~~~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~~~~~~~~~~~~~gla~~~dG~-l~v~~~~---~~~~~~~~~~~~~ 100 (302)
T d2p4oa1 25 PVNTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGD-LVATGWN---ADSIPVVSLVKSD 100 (302)
T ss_dssp CTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSC-EEEEEEC---TTSCEEEEEECTT
T ss_pred CCCCCcCCEEECCCCCEEEEeCCCCEEEEEeCCCCEEEEEcCCCCcceEEEcCCCC-eEEEecC---CceEEEEEecccc
Confidence 44554 223455566666655100 1234444455555556778999998 3333322 2345555544433
Q ss_pred CCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCc
Q 011049 78 VAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNR 157 (494)
Q Consensus 78 ~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~ 157 (494)
.....+....... .+.. +.+.+||+ +++... ....++++|..++.... +..+.
T Consensus 101 ~~~~~~~~~~~~~---~~n~--i~~~~~g~-~~v~~~--------------------~~~~i~~~~~~~~~~~~-~~~~~ 153 (302)
T d2p4oa1 101 GTVETLLTLPDAI---FLNG--ITPLSDTQ-YLTADS--------------------YRGAIWLIDVVQPSGSI-WLEHP 153 (302)
T ss_dssp SCEEEEEECTTCS---CEEE--EEESSSSE-EEEEET--------------------TTTEEEEEETTTTEEEE-EEECG
T ss_pred cceeeccccCCcc---ccce--eEEccCCC-EEeecc--------------------ccccceeeeccCCccee-EecCC
Confidence 3445554433221 0111 22678885 333321 12248888888875433 33322
Q ss_pred chhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCC
Q 011049 158 EKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 204 (494)
Q Consensus 158 ~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~ 204 (494)
......... .......++.++..+++... ....+++++....
T Consensus 154 ~~~~~~~~~--~~~~~ngi~~~~~~l~~~~~---~~~~i~~~~~~~~ 195 (302)
T d2p4oa1 154 MLARSNSES--VFPAANGLKRFGNFLYVSNT---EKMLLLRIPVDST 195 (302)
T ss_dssp GGSCSSTTC--CSCSEEEEEEETTEEEEEET---TTTEEEEEEBCTT
T ss_pred ccceeeccC--cccccccccccCCceeeecC---CCCeEEecccccc
Confidence 100000000 00001134456666655433 2467888876553
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=91.81 E-value=0.13 Score=43.64 Aligned_cols=40 Identities=28% Similarity=0.304 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 323 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 323 ~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
....++...++.++++. ...+|.+.|||+||.+|..++..
T Consensus 106 ~i~~~i~~~i~~~~~~~--~~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 106 SVQDQVESLVKQQASQY--PDYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHHHHHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhC--CCcceEEeccchhHHHHHHHHHH
Confidence 34556666777666653 13589999999999999877653
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=91.66 E-value=0.15 Score=43.38 Aligned_cols=40 Identities=20% Similarity=0.207 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHH
Q 011049 322 EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 322 ~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~ 363 (494)
.....++...+..+.++. ...+|.+.|||.||.+|..++.
T Consensus 112 ~~v~~~i~~~i~~~~~~~--~~~~i~vtGHSLGGAlA~L~a~ 151 (265)
T d3tgla_ 112 GEVQNELVATVLDQFKQY--PSYKVAVTGHSLGGATVLLCAL 151 (265)
T ss_dssp HHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhC--CCceEEEecccchHHHHHHHHH
Confidence 344556666666555543 2368999999999999988765
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=91.33 E-value=0.89 Score=39.39 Aligned_cols=75 Identities=4% Similarity=-0.111 Sum_probs=41.5
Q ss_pred CCeeccccccccccceecCCCceEEEEeeee----ccceEEEEEcCCCCCCCceEeeecccccccCCCCCCc-eeeCCCC
Q 011049 32 KPEILHKLDLRFRSVSWCDDSLALVNETWYK----TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPM-MTRTSTG 106 (494)
Q Consensus 32 ~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~----~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~-~~~spDG 106 (494)
..+.++.+-..-.+|+|.|||+ |+|+.... ..+.+|++++++++ ....+........ . +.|. +.++|||
T Consensus 9 ~~~~v~~~~~g~EGpa~d~dG~-ly~~~~~~~~~~~~~g~I~r~d~~~~--~~~~~~~~~~~~~-~--g~P~Gl~~~~dg 82 (314)
T d1pjxa_ 9 LFTKVTEDIPGAEGPVFDKNGD-FYIVAPEVEVNGKPAGEILRIDLKTG--KKTVICKPEVNGY-G--GIPAGCQCDRDA 82 (314)
T ss_dssp CCEEEECCCTTCEEEEECTTSC-EEEEETTCEETTEECCEEEEECTTTC--CEEEEECCEETTE-E--CCEEEEEECSSS
T ss_pred ceEEeecCCCCCeEeEEeCCCC-EEEEECccccccccCCEEEEEECCCC--cEEEEECCccccC-C--CcceeEEEeCCC
Confidence 3344555444445799999997 55554311 12468999999887 4333332211110 0 2231 3378999
Q ss_pred CEEEEE
Q 011049 107 TNVIAK 112 (494)
Q Consensus 107 ~~i~~~ 112 (494)
..++..
T Consensus 83 ~~l~va 88 (314)
T d1pjxa_ 83 NQLFVA 88 (314)
T ss_dssp SEEEEE
T ss_pred CEEEEE
Confidence 866554
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.28 E-value=1.8 Score=37.23 Aligned_cols=121 Identities=10% Similarity=0.002 Sum_probs=59.8
Q ss_pred ccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceE-eeecccccccCCCCCCc--eeeCCCCCEEEEEEecc
Q 011049 40 DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRV-LFDRVFENVYSDPGSPM--MTRTSTGTNVIAKIKKE 116 (494)
Q Consensus 40 ~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~-lt~~~~~~~~~~~~~~~--~~~spDG~~i~~~~~~~ 116 (494)
........|+|+++.++.+...++ .+.+.+.... .... +...... ..++ +.|+||+..++.....
T Consensus 159 ~~~v~~~~~~~~~~~~~~~~~~d~---~v~~~d~~~~--~~~~~~~~~~~~------~~~v~~v~~~pd~~~~l~s~~~- 226 (325)
T d1pgua1 159 SQRINACHLKQSRPMRSMTVGDDG---SVVFYQGPPF--KFSASDRTHHKQ------GSFVRDVEFSPDSGEFVITVGS- 226 (325)
T ss_dssp SSCEEEEEECSSSSCEEEEEETTT---EEEEEETTTB--EEEEEECSSSCT------TCCEEEEEECSTTCCEEEEEET-
T ss_pred ccccccccccccccceEEEeeccc---cccccccccc--ccceecccccCC------CCccEEeeeccccceecccccc-
Confidence 344456789999988776554333 4555555433 1111 1111111 2222 4589986545444321
Q ss_pred CccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccccc---ccCcEEEEEEecCCCC
Q 011049 117 NDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDIN---LNQLKILTSKESKTEI 193 (494)
Q Consensus 117 ~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s---~d~~~~~~~~~s~~~p 193 (494)
++ .+.++|+.+++........... + ....++ +|+..++. .+. -
T Consensus 227 ----------------d~---~i~iwd~~~~~~~~~l~~~~~~-------v----~~~~~s~~~~dg~~l~s-~s~---D 272 (325)
T d1pgua1 227 ----------------DR---KISCFDGKSGEFLKYIEDDQEP-------V----QGGIFALSWLDSQKFAT-VGA---D 272 (325)
T ss_dssp ----------------TC---CEEEEETTTCCEEEECCBTTBC-------C----CSCEEEEEESSSSEEEE-EET---T
T ss_pred ----------------cc---ceeeeeeccccccccccccccc-------c----ccceeeeeccCCCEEEE-EeC---C
Confidence 12 2778888887654433321110 0 011222 56665543 322 2
Q ss_pred CeEEEEEcCCCce
Q 011049 194 TQYHILSWPLKKS 206 (494)
Q Consensus 194 ~~l~~~~~~~~~~ 206 (494)
..+.++++.+++.
T Consensus 273 ~~i~iwd~~~~~~ 285 (325)
T d1pgua1 273 ATIRVWDVTTSKC 285 (325)
T ss_dssp SEEEEEETTTTEE
T ss_pred CeEEEEECCCCCE
Confidence 4577778776654
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.20 E-value=3.4 Score=34.47 Aligned_cols=150 Identities=7% Similarity=-0.090 Sum_probs=79.4
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCC--CceEeeecccccccCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDV--APRVLFDRVFENVYSD 94 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~--~~~~lt~~~~~~~~~~ 94 (494)
+..|..+++ ++.....+..+........|-+..+.|+++- .....|+..++++... ..+.+...... .
T Consensus 9 ~~~I~~~~l---~~~~~~~~~~~~~~~~~id~d~~~~~lYw~D---~~~~~I~~~~l~~~~~~~~~~~~~~~~~~----~ 78 (266)
T d1ijqa1 9 RHEVRKMTL---DRSEYTSLIPNLRNVVALDTEVASNRIYWSD---LSQRMICSTQLDRAHGVSSYDTVISRDIQ----A 78 (266)
T ss_dssp BSSEEEEET---TSCCCEEEECSCSSEEEEEEETTTTEEEEEE---TTTTEEEEEEC--------CEEEECSSCS----C
T ss_pred CCeEEEEEC---CCCcceeeeCCCCceEEEEEEeCCCEEEEEE---CCCCEEEEEEecCCCCCcceEEEEeCCCC----C
Confidence 456778888 7777666655433334566878888887752 2245788888876321 22222222110 1
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcc
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEE 174 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~ 174 (494)
|.... ..+.++.|++.-. ....|.++++++...+.+...... .+.. .
T Consensus 79 p~glA--vD~~~~~lY~~d~--------------------~~~~I~v~~~~g~~~~~~~~~~~~----~P~~-------l 125 (266)
T d1ijqa1 79 PDGLA--VDWIHSNIYWTDS--------------------VLGTVSVADTKGVKRKTLFRENGS----KPRA-------I 125 (266)
T ss_dssp CCEEE--EETTTTEEEEEET--------------------TTTEEEEEETTSSSEEEEEECTTC----CEEE-------E
T ss_pred cceEE--EeeccceEEEEec--------------------CCCEEEeEecCCceEEEEEcCCCC----Ccce-------E
Confidence 11111 3444566665431 112488888887766555443321 0111 1
Q ss_pred cccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 175 DINLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 175 ~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
.++|..+.++++.. ...+.|++.++++...+.+..
T Consensus 126 ~vd~~~g~ly~~~~--~~~~~I~r~~~dGs~~~~l~~ 160 (266)
T d1ijqa1 126 VVDPVHGFMYWTDW--GTPAKIKKGGLNGVDIYSLVT 160 (266)
T ss_dssp EEETTTTEEEEEEC--SSSCEEEEEETTSCCEEEEEC
T ss_pred EEEcccCeEEEecc--CCCcceeEeccCCCceecccc
Confidence 44555566766543 344679999988877666643
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=89.94 E-value=0.81 Score=41.68 Aligned_cols=41 Identities=2% Similarity=-0.142 Sum_probs=25.2
Q ss_pred ccceeeeccCCCCCCCCCeecccc--ccccccceecCCCceEEEEe
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKL--DLRFRSVSWCDDSLALVNET 59 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~--~~~~~~p~wspDg~~i~f~~ 59 (494)
..++|-++|+ +.++..+...- .....+.++||||++++...
T Consensus 92 ~~~rVavIDl---~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~ 134 (441)
T d1qnia2 92 ANTRVARIRL---DIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFC 134 (441)
T ss_dssp TTTEEEEEET---TTTEEEEEEECTTCCCEEEEEECCSSBCCEEEE
T ss_pred CCCEEEEEEC---CCCcEeeEEecCCCCCccceEEeccCCEEEEEe
Confidence 3446667777 66665554332 12344678999999876554
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=89.92 E-value=3.7 Score=36.06 Aligned_cols=28 Identities=11% Similarity=-0.133 Sum_probs=18.8
Q ss_pred ceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 46 VSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 46 p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
.+|+|||+.++.+ ... .++|.+++.+++
T Consensus 198 i~f~pdg~~~yv~-~e~--~~~V~v~~~~~~ 225 (365)
T d1jofa_ 198 VAMHPTGNYLYAL-MEA--GNRICEYVIDPA 225 (365)
T ss_dssp EEECTTSSEEEEE-ETT--TTEEEEEEECTT
T ss_pred EEECCCCceEEEe-ccC--CCEEEEEEecCC
Confidence 5799999975554 322 357777777654
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=89.74 E-value=3.7 Score=34.01 Aligned_cols=41 Identities=15% Similarity=0.010 Sum_probs=26.4
Q ss_pred ccceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEe
Q 011049 16 PRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNET 59 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~ 59 (494)
..+.|.++++ +.++... +...........|+||++.++...
T Consensus 37 ~Dg~i~iWd~---~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~ 78 (317)
T d1vyhc1 37 EDATIKVWDY---ETGDFERTLKGHTDSVQDISFDHSGKLLASCS 78 (317)
T ss_dssp SSSCEEEEET---TTCCCCEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCeEEEEEC---CCCCEEEEEeCCCCcEEEEeeecccccccccc
Confidence 3457778887 5455443 433344455778999999877654
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=89.43 E-value=1.9 Score=36.83 Aligned_cols=50 Identities=10% Similarity=0.022 Sum_probs=30.4
Q ss_pred ccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCC
Q 011049 44 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGT 107 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~ 107 (494)
..++++|||+ |+++ .. ...+||+++.++. .+.+...... |. .+.++|||+
T Consensus 31 e~iAv~pdG~-l~vt-~~--~~~~I~~i~p~g~---~~~~~~~~~~-----~~--gla~~~dG~ 80 (302)
T d2p4oa1 31 ENLASAPDGT-IFVT-NH--EVGEIVSITPDGN---QQIHATVEGK-----VS--GLAFTSNGD 80 (302)
T ss_dssp EEEEECTTSC-EEEE-ET--TTTEEEEECTTCC---EEEEEECSSE-----EE--EEEECTTSC
T ss_pred CCEEECCCCC-EEEE-eC--CCCEEEEEeCCCC---EEEEEcCCCC-----cc--eEEEcCCCC
Confidence 4678999997 4544 32 2468999998764 3333332211 11 234899998
|
| >d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Acylamino-acid-releasing enzyme, N-terminal donain domain: Acylamino-acid-releasing enzyme, N-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=88.03 E-value=3.1 Score=33.09 Aligned_cols=95 Identities=13% Similarity=0.049 Sum_probs=55.0
Q ss_pred CCCCCeeccccccccc-cceecCCCceEEEEee--eeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCc--eeeC
Q 011049 29 EGEKPEILHKLDLRFR-SVSWCDDSLALVNETW--YKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPM--MTRT 103 (494)
Q Consensus 29 ~~~~~~~lt~~~~~~~-~p~wspDg~~i~f~~~--~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~--~~~s 103 (494)
+|++.++||+.+.... .|..+= ..|.|.++ +...+..+|+.++.-. +|..++- + -.|+ +...
T Consensus 44 ~g~~~vkLtkePI~~~~~Pk~~l--dfi~f~RDV~kGkE~Hai~~~Nlk~~-GEE~~i~---------s-pk~vRI~S~~ 110 (313)
T d2hu7a1 44 DGGETVKLNREPINSVLDPHYGV--GRVILVRDVSKGAEQHALFKVNTSRP-GEEQRLE---------A-VKPMRILSGV 110 (313)
T ss_dssp SSSSCEECCSSCCSEECEECTTB--SEEEEEEECSTTSCCEEEEEEETTST-TCEEECT---------T-SCSBEEEEEE
T ss_pred eCCEEEEEecccccCcCCCccCc--ceEEEEeehhcCcceeeEEEEccCCC-CeeeEec---------C-CceEEEEEee
Confidence 5689999999876443 344333 36788887 2335788999988721 1322221 1 1222 1234
Q ss_pred CCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeC
Q 011049 104 STGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESN 156 (494)
Q Consensus 104 pDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~ 156 (494)
-|++.++|+... .++..||++ ++|+.+.|..-+
T Consensus 111 yddk~vvF~Gas------------------ed~~~LYvi--egGklrkL~~vP 143 (313)
T d2hu7a1 111 DTGEAVVFTGAT------------------EDRVALYAL--DGGGLRELARLP 143 (313)
T ss_dssp ECSSCEEEEEEC------------------SSCEEEEEE--ETTEEEEEEEES
T ss_pred ecCceEEEeccc------------------CCceEEEEE--eCCceeeeccCC
Confidence 588899998642 122235544 577777776544
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=87.74 E-value=3.2 Score=35.52 Aligned_cols=81 Identities=12% Similarity=0.053 Sum_probs=44.2
Q ss_pred cccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeC---CCCCEEEEEEeccCcc
Q 011049 43 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRT---STGTNVIAKIKKENDE 119 (494)
Q Consensus 43 ~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~s---pDG~~i~~~~~~~~~~ 119 (494)
....+|+||+..++.+... ...|.+.++..+ +........... ....+ |+ |||++++..+.
T Consensus 208 v~~v~~~pd~~~~l~s~~~---d~~i~iwd~~~~--~~~~~l~~~~~~----v~~~~--~s~~~~dg~~l~s~s~----- 271 (325)
T d1pgua1 208 VRDVEFSPDSGEFVITVGS---DRKISCFDGKSG--EFLKYIEDDQEP----VQGGI--FALSWLDSQKFATVGA----- 271 (325)
T ss_dssp EEEEEECSTTCCEEEEEET---TCCEEEEETTTC--CEEEECCBTTBC----CCSCE--EEEEESSSSEEEEEET-----
T ss_pred cEEeeeccccceecccccc---ccceeeeeeccc--cccccccccccc----cccce--eeeeccCCCEEEEEeC-----
Confidence 3456899996555554433 345777777765 433322211111 01222 44 78987766541
Q ss_pred ceEEEEccCCCCCCCCCCceEeeecCCCceEEEEee
Q 011049 120 QIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES 155 (494)
Q Consensus 120 ~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~ 155 (494)
++ .+.++|+.+++..+.+..
T Consensus 272 -------------D~---~i~iwd~~~~~~~~~~~~ 291 (325)
T d1pgua1 272 -------------DA---TIRVWDVTTSKCVQKWTL 291 (325)
T ss_dssp -------------TS---EEEEEETTTTEEEEEEEC
T ss_pred -------------CC---eEEEEECCCCCEEEEEEe
Confidence 11 277889998876554443
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=87.07 E-value=7.7 Score=32.64 Aligned_cols=82 Identities=15% Similarity=0.051 Sum_probs=46.6
Q ss_pred cceeeeccCCCCCCCCCeeccccc-----cccccceecCCCceEEEEeeee-c--cceEEEEEcCCCCCCCceEeeeccc
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLD-----LRFRSVSWCDDSLALVNETWYK-T--SQTRTWLVCPGSKDVAPRVLFDRVF 88 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~-----~~~~~p~wspDg~~i~f~~~~~-~--~~~~~~~~~~~~g~~~~~~lt~~~~ 88 (494)
+..|+++|. ++++.+.+.... .........|||+ |+|.+... . ....+|.++ .+ +.+.+.....
T Consensus 77 ~~gl~~~d~---~tg~~~~l~~~~~~~~~~~~nd~~vd~~G~-iw~~~~~~~~~~~~g~l~~~~--~g--~~~~~~~~~~ 148 (295)
T d2ghsa1 77 DDGLFLRDT---ATGVLTLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KG--KVTKLFADIS 148 (295)
T ss_dssp TTEEEEEET---TTCCEEEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TT--EEEEEEEEES
T ss_pred eCccEEeec---ccceeeEEeeeecCCCcccceeeEECCCCC-EEEEeccccccccceeEeeec--CC--cEEEEeeccC
Confidence 456888887 777776665322 1233557889996 56655421 1 234566664 33 4444443211
Q ss_pred ccccCCCCCCceeeCCCCCEEEEEE
Q 011049 89 ENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 89 ~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
. |.... ||||++.+++..
T Consensus 149 ~-----~Ng~~--~s~d~~~l~~~d 166 (295)
T d2ghsa1 149 I-----PNSIC--FSPDGTTGYFVD 166 (295)
T ss_dssp S-----EEEEE--ECTTSCEEEEEE
T ss_pred C-----cceee--ecCCCceEEEee
Confidence 1 12233 999999888875
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=86.40 E-value=0.92 Score=38.85 Aligned_cols=81 Identities=9% Similarity=-0.054 Sum_probs=45.5
Q ss_pred ccceeeeccCCCCCCCCCeecc---ccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccccc
Q 011049 16 PRDIIYTQPAEPAEGEKPEILH---KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt---~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~ 92 (494)
..+.|.++++ ......... ..........|+|||+.|+..+. ...|++.++..+ +..... .+.
T Consensus 246 ~d~~i~~~~~---~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~----dg~i~iwd~~~~--~~~~~~--~~H--- 311 (340)
T d1tbga_ 246 DDATCRLFDL---RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD----DFNCNVWDALKA--DRAGVL--AGH--- 311 (340)
T ss_dssp TTSCEEEEET---TTTEEEEEECCTTCCSCEEEEEECSSSCEEEEEET----TSCEEEEETTTC--CEEEEE--CCC---
T ss_pred CCCeEEEEee---cccccccccccccccCceEEEEECCCCCEEEEEEC----CCEEEEEECCCC--cEEEEE--cCC---
Confidence 3456777777 433332221 22223346789999998765432 346778888765 333222 221
Q ss_pred CCCCCCc--eeeCCCCCEEEEEE
Q 011049 93 SDPGSPM--MTRTSTGTNVIAKI 113 (494)
Q Consensus 93 ~~~~~~~--~~~spDG~~i~~~~ 113 (494)
..++ +.|+|||+.|+-.+
T Consensus 312 ---~~~V~~l~~s~d~~~l~s~s 331 (340)
T d1tbga_ 312 ---DNRVSCLGVTDDGMAVATGS 331 (340)
T ss_dssp ---SSCEEEEEECTTSSCEEEEE
T ss_pred ---CCCEEEEEEeCCCCEEEEEc
Confidence 1222 44899999776543
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=86.28 E-value=0.68 Score=39.03 Aligned_cols=80 Identities=10% Similarity=-0.046 Sum_probs=47.9
Q ss_pred cceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
.+.|.++++ ..+++.. +...........|+|||+.|+..+ ....|.+.++..+ +........
T Consensus 226 d~~i~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~----~dg~i~iwd~~~~--~~~~~~~~h-------- 288 (317)
T d1vyhc1 226 DKTIKMWDV---STGMCLMTLVGHDNWVRGVLFHSGGKFILSCA----DDKTLRVWDYKNK--RCMKTLNAH-------- 288 (317)
T ss_dssp TSEEEEEET---TTTEEEEEEECCSSCEEEEEECSSSSCEEEEE----TTTEEEEECCTTS--CCCEEEECC--------
T ss_pred CCEEEEEEC---CCCcEEEEEeCCCCCEEEEEECCCCCEEEEEE----CCCeEEEEECCCC--cEEEEEcCC--------
Confidence 356777887 5554432 333334455678999999877653 2346888888766 433332211
Q ss_pred CCCc--eeeCCCCCEEEEEE
Q 011049 96 GSPM--MTRTSTGTNVIAKI 113 (494)
Q Consensus 96 ~~~~--~~~spDG~~i~~~~ 113 (494)
..++ +.|||||+.|+...
T Consensus 289 ~~~V~~~~~s~~~~~l~s~s 308 (317)
T d1vyhc1 289 EHFVTSLDFHKTAPYVVTGS 308 (317)
T ss_dssp SSCEEEEEECSSSSCEEEEE
T ss_pred CCCEEEEEEcCCCCEEEEEe
Confidence 1222 34899999877543
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=85.85 E-value=6.4 Score=33.11 Aligned_cols=134 Identities=11% Similarity=0.027 Sum_probs=69.0
Q ss_pred ceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
+.|.++++ ..++... ............|+|+++.++..+. ...+.+.++..+ ... ....+. .
T Consensus 181 ~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----d~~i~i~d~~~~--~~~--~~~~~h------~ 243 (355)
T d1nexb2 181 NTLIVWDV---AQMKCLYILSGHTDRIYSTIYDHERKRCISASM----DTTIRIWDLENG--ELM--YTLQGH------T 243 (355)
T ss_dssp SCEEEEET---TTTEEEEEECCCSSCEEEEEEETTTTEEEEEET----TSCEEEEETTTC--CEE--EEECCC------S
T ss_pred ceeeeeec---ccccceeeeeccccccccccccccceeeecccc----cceEEeeecccc--ccc--cccccc------c
Confidence 45666776 4443332 2223334456789999998776542 345778887765 322 222222 2
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.++.+.+.+++.++... . ++ .+.++|++++........... . .-..+
T Consensus 244 ~~v~~~~~~~~~l~~~~-------------~-----dg---~i~iwd~~~~~~~~~~~~~~~------~------~~~~~ 290 (355)
T d1nexb2 244 ALVGLLRLSDKFLVSAA-------------A-----DG---SIRGWDANDYSRKFSYHHTNL------S------AITTF 290 (355)
T ss_dssp SCCCEEEECSSEEEEEC-------------T-----TS---EEEEEETTTCCEEEEEECTTC------C------CCCEE
T ss_pred ccccccccccceeeeee-------------c-----cc---ccccccccccceecccccCCc------e------EEEEE
Confidence 23333445566555432 1 11 377888887654332222110 0 01134
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCce
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKS 206 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~ 206 (494)
++++. +++..+ -..+.++++++++.
T Consensus 291 ~~~~~-~l~~g~----d~~i~vwd~~tg~~ 315 (355)
T d1nexb2 291 YVSDN-ILVSGS----ENQFNIYNLRSGKL 315 (355)
T ss_dssp EECSS-EEEEEE----TTEEEEEETTTCCB
T ss_pred cCCCC-EEEEEe----CCEEEEEECCCCCE
Confidence 45554 444433 24688889887664
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=83.67 E-value=10 Score=31.18 Aligned_cols=145 Identities=10% Similarity=0.052 Sum_probs=73.7
Q ss_pred eeeeccCCCCCCCCCeeccccc-cccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 19 IIYTQPAEPAEGEKPEILHKLD-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~~~-~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
.|+..++ +|+..+.+.... ..-.+.+.-.-++.|+++. .....|.++++++. ..+.|...... .|..
T Consensus 59 ~I~~~~l---~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d---~~~~~I~~~~~dg~--~~~~l~~~~l~----~p~~ 126 (263)
T d1npea_ 59 SIGRASL---HGGEPTTIIRQDLGSPEGIALDHLGRTIFWTD---SQLDRIEVAKMDGT--QRRVLFDTGLV----NPRG 126 (263)
T ss_dssp EEEEEES---SSCCCEEEECTTCCCEEEEEEETTTTEEEEEE---TTTTEEEEEETTSC--SCEEEECSSCS----SEEE
T ss_pred eEEEEEc---ccCCcEEEEEeccccccEEEEeccCCeEEEec---cCCCEEEEEecCCc--eEEEEeccccc----CCcE
Confidence 4555555 555555443322 1222333433356666652 22468999999876 55555433211 1121
Q ss_pred CceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccccc
Q 011049 98 PMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDIN 177 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s 177 (494)
.+ ..|...+++++... ...+.|++.++++...+.+....-. .+. ...++
T Consensus 127 l~--vdp~~g~ly~t~~~------------------~~~~~I~r~~~dG~~~~~i~~~~~~----~P~-------glaiD 175 (263)
T d1npea_ 127 IV--TDPVRGNLYWTDWN------------------RDNPKIETSHMDGTNRRILAQDNLG----LPN-------GLTFD 175 (263)
T ss_dssp EE--EETTTTEEEEEECC------------------SSSCEEEEEETTSCCCEEEECTTCS----CEE-------EEEEE
T ss_pred EE--EecccCcEEEeecC------------------CCCcEEEEecCCCCCceeeeeeccc----ccc-------eEEEe
Confidence 22 46666666665421 1123488888887665555432210 011 12455
Q ss_pred ccCcEEEEEEecCCCCCeEEEEEcCCCceeEe
Q 011049 178 LNQLKILTSKESKTEITQYHILSWPLKKSSQI 209 (494)
Q Consensus 178 ~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~l 209 (494)
+.++++++.... ...|...+.++...+.+
T Consensus 176 ~~~~~lYw~d~~---~~~I~~~~~~g~~~~~v 204 (263)
T d1npea_ 176 AFSSQLCWVDAG---THRAECLNPAQPGRRKV 204 (263)
T ss_dssp TTTTEEEEEETT---TTEEEEEETTEEEEEEE
T ss_pred ecCcEEEEEeCC---CCEEEEEECCCCCeEEE
Confidence 556677665432 24688888776554444
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=83.67 E-value=12 Score=32.01 Aligned_cols=57 Identities=11% Similarity=0.076 Sum_probs=33.1
Q ss_pred cccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCC--ceeeCCCCCEEEEEE
Q 011049 43 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP--MMTRTSTGTNVIAKI 113 (494)
Q Consensus 43 ~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~--~~~~spDG~~i~~~~ 113 (494)
....+|||||+.|+..+ . ...|.+.+...+ + .+....+. ..+ .+.+++++..++...
T Consensus 124 V~~l~~s~~~~~l~s~~-~---dg~v~i~~~~~~--~--~~~~~~~h------~~~v~~~~~~~~~~~~~~~~ 182 (388)
T d1erja_ 124 IRSVCFSPDGKFLATGA-E---DRLIRIWDIENR--K--IVMILQGH------EQDIYSLDYFPSGDKLVSGS 182 (388)
T ss_dssp EEEEEECTTSSEEEEEE-T---TSCEEEEETTTT--E--EEEEECCC------SSCEEEEEECTTSSEEEEEE
T ss_pred EEEEEECCCCCcceecc-c---cccccccccccc--c--cccccccc------cccccccccccccccccccc
Confidence 34578999999877644 2 335666676654 2 23222221 112 234789998777654
|
| >d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Acylamino-acid-releasing enzyme, N-terminal donain domain: Acylamino-acid-releasing enzyme, N-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=81.99 E-value=5.1 Score=31.84 Aligned_cols=85 Identities=14% Similarity=0.101 Sum_probs=51.9
Q ss_pred eeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeecc-ceEEEEEcCCCCCCCceEeeecccccccCC-CC
Q 011049 19 IIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTS-QTRTWLVCPGSKDVAPRVLFDRVFENVYSD-PG 96 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~-~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~-~~ 96 (494)
.+|+.|+ ..|..+.+|..++....+..+|+-|- ++.+.+. .+....+|+..+ ...++ +.+..+++.. |.
T Consensus 168 sfF~adl---~SG~lri~tpkeGS~~~ay~~~gnKV---~sdyEt~gEsywit~D~~s~--~yerv-e~P~kd~~sy~p~ 238 (313)
T d2hu7a1 168 SLFTSNL---SSGGLRVFDSGEGSFSSASISPGMKV---TAGLETAREARLVTVDPRDG--SVEDL-ELPSKDFSSYRPT 238 (313)
T ss_dssp EEEEEET---TTEEEEEECCSSEEEEEEEECTTSCE---EEEEEESSCEEEEEECTTTC--CEEEC-CCSSCHHHHHCCS
T ss_pred eEEEEec---ccCCEEEecCCCCcccceeEccCcee---eeccCCCCceEEEEEecccC--ceeee-ecCcccceeecce
Confidence 4899999 78999999999999999999999875 5565442 223334466655 43343 3333333221 11
Q ss_pred CCc-eeeCCCCCEEEEE
Q 011049 97 SPM-MTRTSTGTNVIAK 112 (494)
Q Consensus 97 ~~~-~~~spDG~~i~~~ 112 (494)
... +.+.||++-++..
T Consensus 239 ~I~~~~Y~Pdd~L~iia 255 (313)
T d2hu7a1 239 AITWLGYLPDGRLAVVA 255 (313)
T ss_dssp EEEEEEECTTSCEEEEE
T ss_pred EEEeeeeCCCCcEEEEE
Confidence 111 2258888754443
|