Citrus Sinensis ID: 011094
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 494 | 2.2.26 [Sep-21-2011] | |||||||
| P80065 | 661 | Beta-fructofuranosidase, | N/A | no | 0.955 | 0.714 | 0.635 | 1e-179 | |
| P29000 | 636 | Acid beta-fructofuranosid | N/A | no | 0.892 | 0.693 | 0.657 | 1e-176 | |
| P93761 | 640 | Acid beta-fructofuranosid | N/A | no | 0.896 | 0.692 | 0.673 | 1e-172 | |
| Q39041 | 664 | Acid beta-fructofuranosid | yes | no | 0.908 | 0.676 | 0.615 | 1e-166 | |
| P29001 | 649 | Acid beta-fructofuranosid | N/A | no | 0.927 | 0.705 | 0.607 | 1e-164 | |
| Q43348 | 648 | Acid beta-fructofuranosid | no | no | 0.890 | 0.679 | 0.618 | 1e-164 | |
| Q43857 | 642 | Acid beta-fructofuranosid | N/A | no | 0.805 | 0.619 | 0.662 | 1e-162 | |
| O24509 | 651 | Acid beta-fructofuranosid | N/A | no | 0.827 | 0.628 | 0.649 | 1e-156 | |
| P49175 | 670 | Beta-fructofuranosidase 1 | N/A | no | 0.801 | 0.591 | 0.660 | 1e-153 | |
| Q9FSV7 | 654 | Sucrose:sucrose 1-fructos | N/A | no | 0.848 | 0.640 | 0.531 | 1e-127 |
| >sp|P80065|INVB_DAUCA Beta-fructofuranosidase, soluble isoenzyme I OS=Daucus carota GN=INV*DC4 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 629 bits (1621), Expect = e-179, Method: Compositional matrix adjust.
Identities = 312/491 (63%), Positives = 376/491 (76%), Gaps = 19/491 (3%)
Query: 1 MDTPYHHL------HAPPYYP-PLLPEEQPS-DAGTPASHRKPFKGFAAILASAIFLLSL 52
MDT YH L HA Y P P PE + D ++R+P K +++L S + L +
Sbjct: 1 MDT-YHFLPSRDLEHASSYTPRPDSPETRHEPDPDRSKTNRRPIKIVSSVLLSTLILSFV 59
Query: 53 VALIIN----QTQKPLPSQN----NIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIK 104
+ L++N Q + S+N + SK P RGV++GVS KS +
Sbjct: 60 IFLLVNPNVQQVVRKKVSKNSNGEDRNKASKSPEMLGPPSRGVSQGVSEKSFRQA--TAE 117
Query: 105 GSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHA 164
SY WTN M +WQRTSFHFQP++NWMNDPNGPLF+ GWYHLFYQYNPDSA+WGNITWGHA
Sbjct: 118 PSYPWTNDMLSWQRTSFHFQPQENWMNDPNGPLFHMGWYHLFYQYNPDSAIWGNITWGHA 177
Query: 165 VSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPA 224
+S DLI+WL+LP AM PDQWYDINGVWTGSAT+LPDG+IVMLYTG TD VQVQNLAYPA
Sbjct: 178 ISRDLINWLHLPFAMQPDQWYDINGVWTGSATVLPDGKIVMLYTGDTDDLVQVQNLAYPA 237
Query: 225 DPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLV 284
+ SDPLLLDW+KYP NPV+ PP IG DFRDPTTAW G DGKWR+TIGSK+ KTGISL+
Sbjct: 238 NLSDPLLLDWIKYPDNPVMFPPPGIGSTDFRDPTTAWIGRDGKWRITIGSKVNKTGISLM 297
Query: 285 YQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344
Y+TTDF TYELLD LHAVPGTGMWECVDFYPV++ GS GLDTS GPG+KHVLK+SLDD
Sbjct: 298 YKTTDFITYELLDNLLHAVPGTGMWECVDFYPVSVTGSNGLDTSVNGPGVKHVLKSSLDD 357
Query: 345 TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINE 404
+ D+YA+GTY+P NDKWTPDNPE DVGIGL+ DYG+YYASK+FYD K+RR++WGWI E
Sbjct: 358 DRHDYYALGTYDPINDKWTPDNPELDVGIGLRLDYGKYYASKTFYDQDKERRLLWGWIGE 417
Query: 405 TDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSV 464
TD+ES DL KGWASVQ+IPRTV++D KTG+N++QWPV+E+ESLR S ++V ++PGS+
Sbjct: 418 TDSESADLLKGWASVQSIPRTVVFDKKTGTNILQWPVKEVESLRSRSYEIDDVELKPGSL 477
Query: 465 VPLDIGVATQV 475
VPL I A Q+
Sbjct: 478 VPLKISSAAQL 488
|
May participate in the regulation of the hexose level in mature tissues and in the utilization of sucrose stored in vacuoles. Daucus carota (taxid: 4039) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 6 |
| >sp|P29000|INVA_SOLLC Acid beta-fructofuranosidase OS=Solanum lycopersicum GN=TIV1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 618 bits (1593), Expect = e-176, Method: Compositional matrix adjust.
Identities = 305/464 (65%), Positives = 363/464 (78%), Gaps = 23/464 (4%)
Query: 17 LLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQTQKPLPSQNNIVPTSKP 76
LLP+ QP D+G HRK K + I S LLS+ I Q P ++ P
Sbjct: 17 LLPD-QP-DSG----HRKSLKIISGIFLSVFLLLSVAFFPILNNQSPDLQIDSRSPA--- 67
Query: 77 TSFSNPEPRGVAEGVSAKSNSHLLRNIKG----SYNWTNAMFTWQRTSFHFQPEKNWMND 132
P RGV++GVS K+ R++ G SY W+NAM +WQRT++HFQP+KNWMND
Sbjct: 68 -----PPSRGVSQGVSDKT----FRDVAGASHVSYAWSNAMLSWQRTAYHFQPQKNWMND 118
Query: 133 PNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWT 192
PNGPL++KGWYHLFYQYNPDSA+WGNITWGHAVS DLIHWLYLP AMVPDQWYDINGVWT
Sbjct: 119 PNGPLYHKGWYHLFYQYNPDSAIWGNITWGHAVSKDLIHWLYLPFAMVPDQWYDINGVWT 178
Query: 193 GSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPK 252
GSATILPDGQI+MLYTG TD VQVQNLAYPA+ SDPLLLDWVK+ GNPVLVPP IG K
Sbjct: 179 GSATILPDGQIMMLYTGDTDDYVQVQNLAYPANLSDPLLLDWVKFKGNPVLVPPPGIGVK 238
Query: 253 DFRDPTTAWAGP-DGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWEC 311
DFRDPTTAW GP +G+W LTIGSKIGKTG++LVY+T++F +++LLD LHAVPGTGMWEC
Sbjct: 239 DFRDPTTAWTGPQNGQWLLTIGSKIGKTGVALVYETSNFTSFKLLDGVLHAVPGTGMWEC 298
Query: 312 VDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDV 371
VDFYPV+ + GLDTS GPG+KHVLKASLDD K DHYAIGTY+ +KWTPDNPE D
Sbjct: 299 VDFYPVSTKKTNGLDTSYNGPGVKHVLKASLDDNKQDHYAIGTYDLGKNKWTPDNPELDC 358
Query: 372 GIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNK 431
GIGL+ DYG+YYASK+FYDP K+RR++WGWI ETD+ES DL+KGWASVQ+IPRTVLYD K
Sbjct: 359 GIGLRLDYGKYYASKTFYDPKKERRVLWGWIGETDSESADLQKGWASVQSIPRTVLYDKK 418
Query: 432 TGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQV 475
TG++++QWPVEEIESLR ++V ++PGS+ L + A ++
Sbjct: 419 TGTHLLQWPVEEIESLRVGDPTVKQVDLQPGSIELLRVDSAAEL 462
|
Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|P93761|INV1_CAPAN Acid beta-fructofuranosidase AIV-18 OS=Capsicum annuum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 603 bits (1556), Expect = e-172, Method: Compositional matrix adjust.
Identities = 303/450 (67%), Positives = 355/450 (78%), Gaps = 7/450 (1%)
Query: 27 GTPAS-HRKPFKGFAAILASAIFLLSLVALIINQTQKPLPSQNNIVPTSKPTSFSNPEPR 85
G P S HRK K + IL S+ FLL L A +I Q P + N P++ T R
Sbjct: 22 GQPDSGHRKSIKVVSVILLSSFFLLYLAAFVILNNQPP--NLQNKSPSASETLTPATPSR 79
Query: 86 GVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHL 145
GV++GVS K+ + + SY W+NAM WQRT++HFQP+KNWMNDPNGPL++KGWYHL
Sbjct: 80 GVSQGVSEKTFKDVSGTSQVSYTWSNAMLNWQRTAYHFQPQKNWMNDPNGPLYHKGWYHL 139
Query: 146 FYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVM 205
FYQYNPDSA+WGNITWGHAVS DLIHWLYLP AMVPDQWYDINGVWTGSATILPDG I+M
Sbjct: 140 FYQYNPDSAIWGNITWGHAVSTDLIHWLYLPFAMVPDQWYDINGVWTGSATILPDGLIMM 199
Query: 206 LYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGP- 264
LYTG TD VQVQNLAYPA+ SDPLLLDWVKY GNPVLVPP IG KDFRDPTTAW GP
Sbjct: 200 LYTGDTDDYVQVQNLAYPANLSDPLLLDWVKYQGNPVLVPPPGIGVKDFRDPTTAWTGPQ 259
Query: 265 DGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVG 324
+G+W LTIGSK+GKTGI+LVY+T++FK LLD LHAVPGTGMWECVDFYPV+ + G
Sbjct: 260 NGQWLLTIGSKVGKTGIALVYETSNFK---LLDGVLHAVPGTGMWECVDFYPVSTLDANG 316
Query: 325 LDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYA 384
LDTS GPGIKHVLKASLDD K DHY IGTY+P +K++PDNP+ D GIGL+ DYGRYYA
Sbjct: 317 LDTSYNGPGIKHVLKASLDDNKQDHYVIGTYDPVKNKFSPDNPDLDCGIGLRLDYGRYYA 376
Query: 385 SKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEI 444
SK+FYDP K+RR++WGWI ETD+ES DL+KGWASVQ+IPRTVL+D KTG++++QWPV EI
Sbjct: 377 SKTFYDPKKQRRVLWGWIGETDSESADLQKGWASVQSIPRTVLFDKKTGTHLLQWPVAEI 436
Query: 445 ESLRQNSTVFEEVVVEPGSVVPLDIGVATQ 474
ESLR +EV ++PGS+ L + A Q
Sbjct: 437 ESLRSGDPKVKEVNLQPGSIELLHVDSAAQ 466
|
Capsicum annuum (taxid: 4072) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q39041|INVA4_ARATH Acid beta-fructofuranosidase 4, vacuolar OS=Arabidopsis thaliana GN=BFRUCT4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 583 bits (1504), Expect = e-166, Method: Compositional matrix adjust.
Identities = 286/465 (61%), Positives = 343/465 (73%), Gaps = 16/465 (3%)
Query: 18 LPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQTQKPLPSQNNIVPTSKPT 77
LP P+ R+PFKG A+ +F+ VALI + I T T
Sbjct: 24 LPMADPNQETHGPRRRRPFKGLLAVSFGLLFIAFYVALIATH-DGSRSNDEGIDETETIT 82
Query: 78 SFSNPEPRGVAEGVSAKSNSHLLRNIKG-----SYNWTNAMFTWQRTSFHFQPEKNWMND 132
S R GVS K N L + + G ++ W N+M +WQRT+FHFQPE+NWMND
Sbjct: 83 S------RARLAGVSEKRNDGLWK-LSGDRNTPAFEWNNSMLSWQRTAFHFQPEQNWMND 135
Query: 133 PNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWT 192
PNGPLFYKGWYH FYQYNP++AVWG+I WGHAVS DLIHW++LPIAMV DQWYD NGVWT
Sbjct: 136 PNGPLFYKGWYHFFYQYNPNAAVWGDIVWGHAVSRDLIHWVHLPIAMVADQWYDSNGVWT 195
Query: 193 GSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPK 252
GSAT LPDG IVMLYTGSTDK+VQVQNLAYP DP+DPLLL WVK+PGNPVLVPP I PK
Sbjct: 196 GSATFLPDGSIVMLYTGSTDKAVQVQNLAYPEDPNDPLLLKWVKFPGNPVLVPPPGILPK 255
Query: 253 DFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECV 312
DFRDPTTAW +GKWR+TIGSK+ KTGISLVY T DFKTYE LD LH VP TGMWECV
Sbjct: 256 DFRDPTTAWKTSEGKWRITIGSKLNKTGISLVYDTIDFKTYEKLDTLLHRVPNTGMWECV 315
Query: 313 DFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVG 372
DFYPV+ GLDTS GP +KH++KAS+DDT+ DHYA+GTY +N W PD+P DVG
Sbjct: 316 DFYPVSKTAGNGLDTSVNGPDVKHIVKASMDDTRFDHYAVGTYFDSNGTWIPDDPTIDVG 375
Query: 373 I--GLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDN 430
+ L++DYG++YASKSFYD K RR++W WI E+D+E+ D++KGW+S+Q IPRTV+ D
Sbjct: 376 MTASLRYDYGKFYASKSFYDQNKGRRVLWSWIGESDSEASDVQKGWSSLQGIPRTVVLDT 435
Query: 431 KTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQV 475
KTG N+VQWPVEEI+SLR +S F ++ V PGSVVP+D+G A Q+
Sbjct: 436 KTGKNLVQWPVEEIKSLRLSSKQF-DLEVGPGSVVPVDVGSAAQL 479
|
Possible role in the continued mobilization of sucrose to sink organs. Regulates root elongation. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|P29001|INVA_VIGRR Acid beta-fructofuranosidase OS=Vigna radiata var. radiata GN=INVA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 578 bits (1490), Expect = e-164, Method: Compositional matrix adjust.
Identities = 289/476 (60%), Positives = 353/476 (74%), Gaps = 18/476 (3%)
Query: 13 YYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALI------INQTQKPLPS 66
++ PLLP S A +S RK +L +FL SLVA + P+
Sbjct: 3 HHKPLLPTS--SHAAPTSSTRKDL---LFVLCGLLFLSSLVAYGGYRASGVPHAHLSSPT 57
Query: 67 ----QNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGS---YNWTNAMFTWQRT 119
Q++ PTS P+S P RGV+ GVS KS++ L G+ + W N+M +WQRT
Sbjct: 58 SNHQQDHQSPTSLPSSKWYPVSRGVSSGVSEKSSNLLFAGEGGASEAFPWDNSMLSWQRT 117
Query: 120 SFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM 179
SFHFQPEKNWMNDPNGP++YKGWYH FYQYNP+ AVWG+I WGHAVS D+IHWL+LP+AM
Sbjct: 118 SFHFQPEKNWMNDPNGPMYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDMIHWLHLPLAM 177
Query: 180 VPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPG 239
V DQWYD GVWTGSATILP+G+I+MLYTGST++SVQVQNLAYPADPSDPLLLDW+K+ G
Sbjct: 178 VADQWYDKQGVWTGSATILPNGEIIMLYTGSTNESVQVQNLAYPADPSDPLLLDWIKHTG 237
Query: 240 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEY 299
NPVLVPP IG KDFRDPTTAW +GKWR+TIGSK+ KTGI+LVY T DFKTYEL +
Sbjct: 238 NPVLVPPPGIGAKDFRDPTTAWLTSEGKWRITIGSKLNKTGIALVYDTEDFKTYELKEGL 297
Query: 300 LHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPAN 359
L AVPGTGMWECVDF+PV+ GLDTS G +KHV+K SLDD + D+YAIGTY+
Sbjct: 298 LRAVPGTGMWECVDFFPVSKKNGNGLDTSVNGAEVKHVMKVSLDDDRHDYYAIGTYDDNK 357
Query: 360 DKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASV 419
+TPD+ + DVG+GL++DYG +YASK+FYD K RRI+WGWI E+D+E D+ KGWASV
Sbjct: 358 VLFTPDDVKNDVGVGLRYDYGIFYASKTFYDQNKDRRILWGWIGESDSEYADVTKGWASV 417
Query: 420 QTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQV 475
Q+IPRTV D KTGSN++QWPV+E+ESLR S F+ + +PGSVV LDI ATQ+
Sbjct: 418 QSIPRTVRLDTKTGSNLLQWPVDEVESLRLRSDEFKSLKAKPGSVVSLDIETATQL 473
|
Possible role in the continued mobilization of sucrose to sink organs. Vigna radiata var. radiata (taxid: 3916) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q43348|INVA3_ARATH Acid beta-fructofuranosidase 3, vacuolar OS=Arabidopsis thaliana GN=BFRUCT3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 578 bits (1489), Expect = e-164, Method: Compositional matrix adjust.
Identities = 285/461 (61%), Positives = 341/461 (73%), Gaps = 21/461 (4%)
Query: 21 EQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQTQKPLPSQNNIVPTSKPTSFS 80
E SD R+P K A+ + + + V LI+ S+ I S+P
Sbjct: 19 ESRSDQIPETRRRRPIKVHLAVYSGLLLIALYVTLIVTHDG----SKAEIATESRPR--- 71
Query: 81 NPEPRGVAEGVSAKSNSHL-LRNIKG---SYNWTNAMFTWQRTSFHFQPEKNWMNDPNGP 136
GVS KSN + + + G ++ W N + +WQRT+FHFQPEKNWMNDPNGP
Sbjct: 72 -------MAGVSEKSNDGVWISSDDGKVEAFPWNNTILSWQRTAFHFQPEKNWMNDPNGP 124
Query: 137 LFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSAT 196
LFYKGWYH FYQYNP++AVWG+I WGHAVS DLIHWLYLPIAMVPDQWYD NGVWTGSAT
Sbjct: 125 LFYKGWYHFFYQYNPNAAVWGDIVWGHAVSKDLIHWLYLPIAMVPDQWYDANGVWTGSAT 184
Query: 197 ILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRD 256
L DG IVMLYTGSTD+ VQVQNLAYP DPSDPLLL WVK+ GNPVLVPP IG KDFRD
Sbjct: 185 FLDDGSIVMLYTGSTDEFVQVQNLAYPEDPSDPLLLKWVKFSGNPVLVPPPGIGAKDFRD 244
Query: 257 PTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYP 316
PTTAW GKWR+TIGSKI +TGISL+Y TTDFKTYE + LH VP TGMWECVDFYP
Sbjct: 245 PTTAWKTSSGKWRITIGSKINRTGISLIYDTTDFKTYEKHETLLHQVPNTGMWECVDFYP 304
Query: 317 VAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVGI--G 374
V+ GLDTS GP +KHV+KAS+DDT++DHYAIGTY+ +N W PDNP DVGI G
Sbjct: 305 VSKTQLNGLDTSVNGPDVKHVIKASMDDTRIDHYAIGTYDDSNATWVPDNPSIDVGISTG 364
Query: 375 LKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGS 434
L++DYG+YYASK+FYD K RRI+WGWI E+D+E+ D++KGW+SVQ IPRTV+ D +T
Sbjct: 365 LRYDYGKYYASKTFYDQNKGRRILWGWIGESDSEAADVQKGWSSVQGIPRTVVLDTRTHK 424
Query: 435 NVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQV 475
N+VQWPVEEI+SLR +S F ++ + PG+VVP+D+G ATQ+
Sbjct: 425 NLVQWPVEEIKSLRLSSKKF-DMTIGPGTVVPVDVGSATQL 464
|
Possible role in the continued mobilization of sucrose to sink organs. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q43857|INVA_VICFA Acid beta-fructofuranosidase OS=Vicia faba GN=VCINV PE=2 SV=1 | Back alignment and function description |
|---|
Score = 570 bits (1469), Expect = e-162, Method: Compositional matrix adjust.
Identities = 269/406 (66%), Positives = 324/406 (79%), Gaps = 8/406 (1%)
Query: 74 SKPTSFSNPEPRGVAEGVSAKSNSHLLRN----IKGSYNWTNAMFTWQRTSFHFQPEKNW 129
++PT+ S RGV+ GVS KSN+ LL GS+ W N M +WQRT+FHFQPEKNW
Sbjct: 64 TRPTTLS----RGVSSGVSEKSNTFLLSGNLVGEGGSFPWNNTMLSWQRTAFHFQPEKNW 119
Query: 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDING 189
MNDPNGPL+YKGWYH FYQYNP+ AVWG+I WGHAVS DLIHWL+LP+AMV DQWYD NG
Sbjct: 120 MNDPNGPLYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDLIHWLHLPLAMVADQWYDSNG 179
Query: 190 VWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHI 249
VWTGSATILPDGQ++MLYTGST++ VQVQNLAYPAD +DPLL+DW+KYP NPVLVPP I
Sbjct: 180 VWTGSATILPDGQVIMLYTGSTNEFVQVQNLAYPADLNDPLLVDWIKYPSNPVLVPPPGI 239
Query: 250 GPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMW 309
PKDFRDPTTAW +GKWR+TIGSKI KTG++LVY T DFKTYE D L+AVPGTGMW
Sbjct: 240 LPKDFRDPTTAWLTTEGKWRITIGSKINKTGVALVYDTVDFKTYERKDMLLNAVPGTGMW 299
Query: 310 ECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEE 369
ECVDF+PV++ GLDTS TG +KHV+K SLDD + D+YA+GTY+ K+ D+ E
Sbjct: 300 ECVDFFPVSMKSENGLDTSFTGDEVKHVMKVSLDDDRHDYYALGTYDEKKVKFIADDFEN 359
Query: 370 DVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYD 429
DVGIGL++DYG +YASK+FYD K RR++WGWI E+D+E D+ KGWASVQ+IPR V D
Sbjct: 360 DVGIGLRYDYGIFYASKTFYDQKKDRRVLWGWIGESDSEYADVAKGWASVQSIPRIVKLD 419
Query: 430 NKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQV 475
KTGSN++QWPV E+ESLR S F+ + V+PG+VV +DI ATQ+
Sbjct: 420 KKTGSNLLQWPVAEVESLRLRSDEFQNLKVKPGAVVSVDIETATQL 465
|
Vicia faba (taxid: 3906) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|O24509|INVA_PHAVU Acid beta-fructofuranosidase OS=Phaseolus vulgaris PE=2 SV=1 | Back alignment and function description |
|---|
Score = 550 bits (1418), Expect = e-156, Method: Compositional matrix adjust.
Identities = 269/414 (64%), Positives = 328/414 (79%), Gaps = 5/414 (1%)
Query: 67 QNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGS---YNWTNAMFTWQRTSFHF 123
Q + PTS P+S + RGV+ GVS KS+S L G+ + W N+M +WQRTSFHF
Sbjct: 62 QEHQSPTSLPSSKWHAVSRGVSSGVSEKSSSMLFSGEGGASEAFPWDNSMLSWQRTSFHF 121
Query: 124 QPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ 183
QPEKNWMNDPNGP++YKGWYH FYQYNP+ AVWG+I WGHAVS D+IHWL+LP+AMV DQ
Sbjct: 122 QPEKNWMNDPNGPMYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDMIHWLHLPLAMVADQ 181
Query: 184 WYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVL 243
WYD GVWTGSATILP+G+I+MLYTGST++SVQVQNLAYPADPSDPLL+DW+K+PGNPVL
Sbjct: 182 WYDKQGVWTGSATILPNGEIIMLYTGSTNESVQVQNLAYPADPSDPLLVDWIKHPGNPVL 241
Query: 244 VPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAV 303
VPP IG KDFRDPTTAW +GKWR+TIGSK+ KTGI+LVY T DFKTYEL + +L AV
Sbjct: 242 VPPPGIGAKDFRDPTTAWLTSEGKWRITIGSKLNKTGIALVYDTDDFKTYELKNGHLRAV 301
Query: 304 PGTGMWECVDFYPVAINGSVGLDTSAT--GPGIKHVLKASLDDTKVDHYAIGTYNPANDK 361
PGTGMWECVDF+PV+ GLDTS + G +K+V+K SLDD + D+Y IGTY+
Sbjct: 302 PGTGMWECVDFFPVSKKNENGLDTSLSINGAEVKYVMKVSLDDDRHDYYTIGTYDENKVL 361
Query: 362 WTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQT 421
+TPD+ + DVG+GL++DYG +YASK+FYD RRI+WGWI E+D+E D+ KGWASVQ+
Sbjct: 362 FTPDDVKNDVGVGLRYDYGIFYASKTFYDQNMDRRILWGWIGESDSEYADVTKGWASVQS 421
Query: 422 IPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQV 475
IPRTV D KTGSN++QWPV E+ESLR S F+ + +PGSVV LDI ATQ+
Sbjct: 422 IPRTVRLDKKTGSNLLQWPVAEVESLRLRSDEFKSLKAKPGSVVSLDIETATQL 475
|
Phaseolus vulgaris (taxid: 3885) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|P49175|INV1_MAIZE Beta-fructofuranosidase 1 OS=Zea mays GN=IVR1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 543 bits (1399), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/409 (66%), Positives = 319/409 (77%), Gaps = 13/409 (3%)
Query: 85 RGVAEGVSAKSNSHLL-RNIKGSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWY 143
RGVAEGVS KS + LL ++WTNAM WQRT+FHFQP KNWMNDPNGPL++KGWY
Sbjct: 91 RGVAEGVSEKSTAPLLGSGALQDFSWTNAMLAWQRTAFHFQPPKNWMNDPNGPLYHKGWY 150
Query: 144 HLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQI 203
HLFYQ+NPDSAVWGNITWGHAVS DL+HWL+LP+AMVPD YD NGVW+GSAT LPDG+I
Sbjct: 151 HLFYQWNPDSAVWGNITWGHAVSRDLLHWLHLPLAMVPDHPYDANGVWSGSATRLPDGRI 210
Query: 204 VMLYTGST-DKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAW- 261
VMLYTGST + S QVQNLA PAD SDPLL +WVK NPVLVPP IGP DFRDPTTA
Sbjct: 211 VMLYTGSTAESSAQVQNLAEPADASDPLLREWVKSDANPVLVPPPGIGPTDFRDPTTACR 270
Query: 262 --AGPDGKWRLTIGSK-IGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318
AG D WR+ IGSK G++LVY+T DF Y+ +HAVPGTGMWECVDFYPVA
Sbjct: 271 TPAGNDTAWRVAIGSKDRDHAGLALVYRTEDFVRYDPAPALMHAVPGTGMWECVDFYPVA 330
Query: 319 INGSVG------LDTSAT-GPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDV 371
L+TSA GPG+KHVLKASLDD K D+YAIGTY+PA D WTPD+ E+DV
Sbjct: 331 AGSGAAAGSGDGLETSAAPGPGVKHVLKASLDDDKHDYYAIGTYDPATDTWTPDSAEDDV 390
Query: 372 GIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNK 431
GIGL++DYG+YYASK+FYDP +RR++WGW+ ETD+E D+ KGWASVQ+IPRTVL D K
Sbjct: 391 GIGLRYDYGKYYASKTFYDPVLRRRVLWGWVGETDSERADILKGWASVQSIPRTVLLDTK 450
Query: 432 TGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQVILHTI 480
TGSN++QWPV E+E+LR + F+ V ++ GSVVPLD+G ATQ+ + +
Sbjct: 451 TGSNLLQWPVVEVENLRMSGKSFDGVALDRGSVVPLDVGKATQLDIEAV 499
|
Zea mays (taxid: 4577) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q9FSV7|SST_FESAR Sucrose:sucrose 1-fructosyltransferase OS=Festuca arundinacea GN=1-SST PE=1 SV=1 | Back alignment and function description |
|---|
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 229/431 (53%), Positives = 294/431 (68%), Gaps = 12/431 (2%)
Query: 52 LVALIINQTQKPLPSQNNIVPTSKPTS-FSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWT 110
+V L+ P+ ++ + P P RG GVS K++ + G + W+
Sbjct: 57 VVGLLAGGRVDRGPAGGDVASAAVPAVPMEIPRSRGKDFGVSEKASGAY--SADGGFPWS 114
Query: 111 NAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI 170
NAM WQRT FHFQPEK++MNDPNGP++Y GWYHLFYQYNP WGNI W HAVS D++
Sbjct: 115 NAMLQWQRTGFHFQPEKHYMNDPNGPVYYGGWYHLFYQYNPKGDSWGNIAWAHAVSKDMV 174
Query: 171 HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPL 230
+W +LP+AMVPDQWYD NGV TGS T+LPDGQ+++LYTG+TD QVQ LA PADPSDPL
Sbjct: 175 NWRHLPLAMVPDQWYDSNGVLTGSITVLPDGQVILLYTGNTDTLAQVQCLATPADPSDPL 234
Query: 231 LLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAG-PDGKWRLTIGSK--IGKTGISLVYQT 287
L +W+K+P NP+L PP IG KDFRDP TAW D WR IGSK G GI L Y+T
Sbjct: 235 LREWIKHPANPILYPPPGIGLKDFRDPLTAWFDHSDNTWRTVIGSKDDDGHAGIILSYKT 294
Query: 288 TDFKTYELLDEYLHAVP-GTGMWECVDFYPVAINGS--VGLDTSATGPGIKHVLKASLDD 344
DF YEL+ +H P GTGM+EC+D YPV N S +G D S P + VLK S DD
Sbjct: 295 KDFVNYELMPGNMHRGPDGTGMYECIDLYPVGGNSSEMLGGDDS---PDVLFVLKESSDD 351
Query: 345 TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINE 404
+ D+YA+G ++ A + WTP + E D+GIGL++D+G+YYASKSFYD K RRIVW +I E
Sbjct: 352 ERHDYYALGRFDAAANIWTPIDQELDLGIGLRYDWGKYYASKSFYDQKKNRRIVWAYIGE 411
Query: 405 TDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSV 464
TD+E D+ KGWA++ TIPRTV D KT +N++QWPVEE+++LR+NST + V+ GSV
Sbjct: 412 TDSEQADITKGWANLMTIPRTVELDKKTRTNLIQWPVEELDTLRRNSTDLSGITVDAGSV 471
Query: 465 VPLDIGVATQV 475
+ L + Q+
Sbjct: 472 IRLPLHQGAQI 482
|
Transferase involved in fructan biosynthesis that catalyzes the production of 1-kestose (fructose and nystose to a lower extent) from sucrose. Exhibits also some hydrolase activity toward 1-kestose, thus producing fructose and sucrose. A weak fructosyltransferase activity leads to the formation of nystose from 1-kestose. Festuca arundinacea (taxid: 4606) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 9 EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 494 | ||||||
| 115548295 | 642 | beta-fructofuranosidase [Citrus sinensis | 0.961 | 0.739 | 0.993 | 0.0 | |
| 19705584 | 588 | vacuolar invertase [Citrus sinensis] | 0.850 | 0.714 | 0.978 | 0.0 | |
| 399138442 | 643 | soluble acid invertase [Litchi chinensis | 0.941 | 0.723 | 0.770 | 0.0 | |
| 384371334 | 639 | vacuolar invertase [Manihot esculenta] | 0.947 | 0.732 | 0.747 | 0.0 | |
| 255539759 | 639 | Beta-fructofuranosidase, soluble isoenzy | 0.929 | 0.718 | 0.753 | 0.0 | |
| 229597364 | 645 | vacuolar invertase [Gossypium hirsutum] | 0.912 | 0.699 | 0.728 | 0.0 | |
| 310722811 | 648 | vacuolar invertase 1 [Gossypium hirsutum | 0.910 | 0.694 | 0.727 | 0.0 | |
| 268526570 | 618 | vacuolar invertase 2 [Gossypium hirsutum | 0.927 | 0.741 | 0.700 | 0.0 | |
| 116744388 | 645 | Soluble acid invertase [Pyrus pyrifolia | 0.945 | 0.724 | 0.692 | 0.0 | |
| 186397271 | 645 | soluble acid invertase [Pyrus pyrifolia] | 0.945 | 0.724 | 0.694 | 0.0 |
| >gi|115548295|dbj|BAF34363.1| beta-fructofuranosidase [Citrus sinensis] | Back alignment and taxonomy information |
|---|
Score = 977 bits (2526), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/475 (99%), Positives = 473/475 (99%)
Query: 1 MDTPYHHLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQT 60
MDTPYHHLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQT
Sbjct: 1 MDTPYHHLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQT 60
Query: 61 QKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS 120
QKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS
Sbjct: 61 QKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS 120
Query: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV 180
FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHA S DLIHWLYLPIAMV
Sbjct: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAASTDLIHWLYLPIAMV 180
Query: 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN 240
PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN
Sbjct: 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN 240
Query: 241 PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL 300
PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL
Sbjct: 241 PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL 300
Query: 301 HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPAND 360
HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPAND
Sbjct: 301 HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPAND 360
Query: 361 KWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQ 420
KWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQ
Sbjct: 361 KWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQ 420
Query: 421 TIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQV 475
TIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQ+
Sbjct: 421 TIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQL 475
|
Source: Citrus sinensis Species: Citrus sinensis Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|19705584|gb|AAL27709.3|AF433643_1 vacuolar invertase [Citrus sinensis] | Back alignment and taxonomy information |
|---|
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/420 (97%), Positives = 413/420 (98%)
Query: 1 MDTPYHHLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQT 60
MDTPYHHLH+PP YPPLLPEEQPSDAG PASHRKPFKGFAAILAS IFLLSLVALIINQT
Sbjct: 1 MDTPYHHLHSPPQYPPLLPEEQPSDAGPPASHRKPFKGFAAILASVIFLLSLVALIINQT 60
Query: 61 QKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS 120
QKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS
Sbjct: 61 QKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS 120
Query: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV 180
FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV
Sbjct: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV 180
Query: 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN 240
PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN
Sbjct: 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN 240
Query: 241 PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL 300
PVL+PPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL
Sbjct: 241 PVLMPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL 300
Query: 301 HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPAND 360
HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDH GTYNP ND
Sbjct: 301 HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHNKTGTYNPEND 360
Query: 361 KWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQ 420
KWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQ
Sbjct: 361 KWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQ 420
|
Source: Citrus sinensis Species: Citrus sinensis Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|399138442|gb|AFP23357.1| soluble acid invertase [Litchi chinensis] | Back alignment and taxonomy information |
|---|
Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/475 (77%), Positives = 405/475 (85%), Gaps = 10/475 (2%)
Query: 7 HLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALII-NQTQKPLP 65
HLHAP YY PL E PS G PA+ R+P KGFA ILAS IFLLSLV LII NQ+++PL
Sbjct: 8 HLHAP-YYTPL--PEHPSTGGPPATLRRPLKGFALILASVIFLLSLVGLIIINQSRQPLQ 64
Query: 66 SQNNIV-----PTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS 120
+ + V + P SFS PRGV EGVSAKSN + + SYNWTNAMF+WQRTS
Sbjct: 65 NSTSNVNIPSLLSPPPPSFSRRVPRGVEEGVSAKSNPSPF-DQESSYNWTNAMFSWQRTS 123
Query: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV 180
FHFQP +NWMNDP+GPL++ GWYHLFYQYNPDSAVWGNITWGHAVS DLIHWLYLPIAMV
Sbjct: 124 FHFQPTRNWMNDPDGPLYHMGWYHLFYQYNPDSAVWGNITWGHAVSRDLIHWLYLPIAMV 183
Query: 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN 240
PDQ YDINGVWTGSAT+LPDGQIVMLYTG T + VQVQNLAYPA+ SDPLLL WVKY GN
Sbjct: 184 PDQPYDINGVWTGSATLLPDGQIVMLYTGDTAELVQVQNLAYPANLSDPLLLHWVKYSGN 243
Query: 241 PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL 300
PVLVPP HI PKDFRDPTT W GPDGKWR+TIGSKI TG SL+Y TTDFKTYELLD L
Sbjct: 244 PVLVPPTHIAPKDFRDPTTGWIGPDGKWRITIGSKINGTGFSLIYHTTDFKTYELLDHVL 303
Query: 301 HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPAND 360
HAVPGTGMWECVDFYPVAINGS+GLDTSA GPGIKHVLKASLDDTK+DHYA+GTY+P +D
Sbjct: 304 HAVPGTGMWECVDFYPVAINGSMGLDTSAGGPGIKHVLKASLDDTKLDHYALGTYDPDSD 363
Query: 361 KWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQ 420
WTPDNPEEDVGIGL++D GRYYASK+FYD Y+KRRI+WGWINETDTE DDLEKGWASVQ
Sbjct: 364 TWTPDNPEEDVGIGLRYDNGRYYASKTFYDQYRKRRILWGWINETDTEYDDLEKGWASVQ 423
Query: 421 TIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQV 475
TIPRTVL+DNKTG N+VQWPV+E+ESLRQ S FE+V++EPGS+VPLDIG ATQ+
Sbjct: 424 TIPRTVLFDNKTGINIVQWPVQEVESLRQRSIEFEDVLIEPGSIVPLDIGTATQL 478
|
Source: Litchi chinensis Species: Litchi chinensis Genus: Litchi Family: Sapindaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|384371334|gb|AFH77956.1| vacuolar invertase [Manihot esculenta] | Back alignment and taxonomy information |
|---|
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/476 (74%), Positives = 402/476 (84%), Gaps = 8/476 (1%)
Query: 3 TPYHHLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQTQK 62
T ++ HAP Y L QPS AG P R+P K F+ AS IFLLSLV LIINQ+Q+
Sbjct: 5 TSEYNEHAP--YTSL--RGQPSTAGPPIKLRRPLKVFSVTFASFIFLLSLVTLIINQSQE 60
Query: 63 PLPSQN-NIVP-TSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS 120
PLP+ N N P T K TSF+ EPRGVAEGVSAKSN + SYNWTNAMF WQRT+
Sbjct: 61 PLPTPNKNPSPSTPKATSFAKREPRGVAEGVSAKSNPSFFSD-GVSYNWTNAMFYWQRTA 119
Query: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV 180
+HFQPE+NWMN P+GPLF+ GWYHLFYQYNPDSAVWGNITWGHAVS DLIHW +LP AMV
Sbjct: 120 YHFQPERNWMNGPDGPLFHMGWYHLFYQYNPDSAVWGNITWGHAVSRDLIHWFHLPFAMV 179
Query: 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN 240
PDQWYDINGVWTGSAT+LPDGQI+MLYTG T SVQVQNLAYPA+ SDPLL+DW+KYPGN
Sbjct: 180 PDQWYDINGVWTGSATLLPDGQIMMLYTGDTIDSVQVQNLAYPANLSDPLLIDWIKYPGN 239
Query: 241 PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT-GISLVYQTTDFKTYELLDEY 299
PVLVPP I +FRDPTT W GPDGKWR+TIGS++ +T G+SLVYQTT+F TYELL+ +
Sbjct: 240 PVLVPPPGIETDEFRDPTTGWLGPDGKWRITIGSRVNETIGVSLVYQTTNFTTYELLEGF 299
Query: 300 LHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPAN 359
LHAVPGTGMWECVDFYPVAINGS+GLDTSA GP KHVLKASLDDTK+DHYA+GTY+P
Sbjct: 300 LHAVPGTGMWECVDFYPVAINGSLGLDTSANGPDTKHVLKASLDDTKIDHYALGTYDPVT 359
Query: 360 DKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASV 419
D+WTPDNP+EDVGIGL+ DYGRYYASK+FYD KKRRI+WGWINETDTE DDLEKGWASV
Sbjct: 360 DRWTPDNPKEDVGIGLRVDYGRYYASKTFYDQQKKRRILWGWINETDTEEDDLEKGWASV 419
Query: 420 QTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQV 475
QTIPR VL+DNKTG+N++QWPVEEIESLR NST FEE+++ PGSVVPLDIGVATQ+
Sbjct: 420 QTIPRAVLFDNKTGTNLLQWPVEEIESLRLNSTDFEEILIGPGSVVPLDIGVATQL 475
|
Source: Manihot esculenta Species: Manihot esculenta Genus: Manihot Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255539759|ref|XP_002510944.1| Beta-fructofuranosidase, soluble isoenzyme I precursor, putative [Ricinus communis] gi|223550059|gb|EEF51546.1| Beta-fructofuranosidase, soluble isoenzyme I precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/470 (75%), Positives = 395/470 (84%), Gaps = 11/470 (2%)
Query: 9 HAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQTQKPLPS-- 66
HAP PLL EQPS G R+P K F AS IFLLSLV LI+NQ+Q PLP+
Sbjct: 11 HAP--CTPLL--EQPSLLGPSTKLRRPLKVFTVTFASLIFLLSLVTLIMNQSQGPLPTPN 66
Query: 67 QNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTSFHFQPE 126
+N T K TSFS PRGVAEGVSAKSN N SYNWTNAM +WQRT++HFQPE
Sbjct: 67 KNRSPSTPKSTSFSEHVPRGVAEGVSAKSNPSFFSN-GVSYNWTNAMLSWQRTAYHFQPE 125
Query: 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYD 186
KNWMN GPLFY GWYHLFYQYNPDSAVWGNITWGHAVS DLIHWLYLP+AMVPD+WYD
Sbjct: 126 KNWMN---GPLFYMGWYHLFYQYNPDSAVWGNITWGHAVSRDLIHWLYLPMAMVPDKWYD 182
Query: 187 INGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP 246
INGVWTGSAT+LPDGQIVMLYTG T+ SVQVQNLAYPA+ SDPLL+DW+KYPGNPVLVPP
Sbjct: 183 INGVWTGSATLLPDGQIVMLYTGDTNASVQVQNLAYPANLSDPLLIDWIKYPGNPVLVPP 242
Query: 247 RHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT-GISLVYQTTDFKTYELLDEYLHAVPG 305
I +FRDPTTAW GPDG WR+T+GS++ +T GISLVYQTT+F TYELLD LHAVPG
Sbjct: 243 PGIETDEFRDPTTAWMGPDGTWRITLGSRMNETVGISLVYQTTNFTTYELLDGLLHAVPG 302
Query: 306 TGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPD 365
TGMWECVDFYPVAINGS GLDTS GPG+KHVLKASLD+TK+D+YA+GTY+P DKWTPD
Sbjct: 303 TGMWECVDFYPVAINGSKGLDTSVNGPGVKHVLKASLDNTKLDYYALGTYDPVTDKWTPD 362
Query: 366 NPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRT 425
NPEEDVGIGL+ DYGRYYASKSFYD YK+RRI+WGWINETDTE DDL+KGWASVQTIPR
Sbjct: 363 NPEEDVGIGLRVDYGRYYASKSFYDQYKQRRILWGWINETDTEQDDLQKGWASVQTIPRN 422
Query: 426 VLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQV 475
VL+DNKTG+N++QWPVEEIESLR NST F+E+V+ PGSVVPL+IG ATQ+
Sbjct: 423 VLFDNKTGANLLQWPVEEIESLRVNSTDFQEIVIAPGSVVPLEIGTATQL 472
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|229597364|gb|ACQ82802.1| vacuolar invertase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/456 (72%), Positives = 391/456 (85%), Gaps = 5/456 (1%)
Query: 34 KPFKGFAAILASAIFLLSLVALIINQTQKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSA 93
+P KGFA I S +FLLSLV LI+NQ+ +PL S + V + S + +PRG+AEGVSA
Sbjct: 28 RPLKGFAVIFGSVVFLLSLVILIVNQSPEPLASNPSSVTEAGSYSMA-AQPRGIAEGVSA 86
Query: 94 KSNSHLLRNIKGSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDS 153
KSN L + +NWTNAMF WQRT++HFQP+KNWMNDP+GPL++KGWYHLFYQYNPDS
Sbjct: 87 KSNPSLFDKV--GFNWTNAMFYWQRTAYHFQPQKNWMNDPDGPLYHKGWYHLFYQYNPDS 144
Query: 154 AVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK 213
A+WGNITWGHAVS DLIHW YLP+AMVPDQWYDING WTGSAT+LPDG+IVMLYTGST++
Sbjct: 145 AIWGNITWGHAVSKDLIHWFYLPLAMVPDQWYDINGCWTGSATLLPDGRIVMLYTGSTNE 204
Query: 214 SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIG 273
SVQVQNLAYPA+ SDPLLL W+KYPGNPV+VPP I +FRDPTTAW GPDG WR+T+G
Sbjct: 205 SVQVQNLAYPANLSDPLLLQWLKYPGNPVVVPPTGIEDNEFRDPTTAWLGPDGSWRITVG 264
Query: 274 SKIGKT-GISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGP 332
++ T G +LV+QTT+F Y+LLD LHAVPGTGMWECVDFYPVAINGSVGLDT+A GP
Sbjct: 265 TRFNTTIGTALVFQTTNFSDYQLLDGVLHAVPGTGMWECVDFYPVAINGSVGLDTTALGP 324
Query: 333 GIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPY 392
GIKHVLKASLDDTKVDHYAIGTY+ DKWTPDNPEEDVGIGLK DYGRYYASK+F+D
Sbjct: 325 GIKHVLKASLDDTKVDHYAIGTYDMITDKWTPDNPEEDVGIGLKVDYGRYYASKTFFDQS 384
Query: 393 KKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNST 452
K+RRI++GW+NETDTE+DDLEKGWAS+QTIPR+VLYDNKTG++++QWPVEE+ESLR N+T
Sbjct: 385 KQRRILYGWVNETDTEADDLEKGWASIQTIPRSVLYDNKTGTHLLQWPVEEVESLRLNAT 444
Query: 453 VFEEVVVEPGSVVPLDIGVATQV-ILHTISLKLLVT 487
VF++VVVE GSVVPLDIG ATQ+ IL ++ LV+
Sbjct: 445 VFKDVVVEAGSVVPLDIGTATQLDILAEFEIETLVS 480
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|310722811|gb|ADP08983.1| vacuolar invertase 1 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/455 (72%), Positives = 390/455 (85%), Gaps = 5/455 (1%)
Query: 34 KPFKGFAAILASAIFLLSLVALIINQTQKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSA 93
+P KGFA I+ S +FLLSLV LI+NQ+ +PL S + V + S + +PRG+AEGVSA
Sbjct: 31 RPLKGFAVIIGSVVFLLSLVTLIVNQSPEPLASNPSSVTEAGSYSMA-AQPRGIAEGVSA 89
Query: 94 KSNSHLLRNIKGSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDS 153
KSN L + +NWTNAMF WQRT++HFQP+KNWMNDP+GPL++KGWYHLFYQYNPDS
Sbjct: 90 KSNPSLFDKV--GFNWTNAMFYWQRTAYHFQPQKNWMNDPDGPLYHKGWYHLFYQYNPDS 147
Query: 154 AVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK 213
A+WGNITWGHAVS DLIHW YLP+AMVPDQWYDING WTGSAT+LPDG+IVMLYTGST+
Sbjct: 148 AIWGNITWGHAVSTDLIHWFYLPLAMVPDQWYDINGCWTGSATLLPDGRIVMLYTGSTND 207
Query: 214 SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIG 273
SVQVQNLAYPA+ SDPLLL W+KYPGNPV+VPP I ++FRDPTTAW GPDG WR+ +G
Sbjct: 208 SVQVQNLAYPANLSDPLLLQWLKYPGNPVVVPPTGIEDEEFRDPTTAWLGPDGSWRIVVG 267
Query: 274 SKIGKT-GISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGP 332
++ T G +LV+QTT+F YELLD LHAVPGTGMWECVDFYPVAINGSVGLDT+A GP
Sbjct: 268 TRFNTTIGTALVFQTTNFSDYELLDGVLHAVPGTGMWECVDFYPVAINGSVGLDTTALGP 327
Query: 333 GIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPY 392
GIKHVLKASLDDTKVDHYAIGTY+ DKWTPDNPEEDVGIGLK DYGRYYASK+F+D
Sbjct: 328 GIKHVLKASLDDTKVDHYAIGTYDMITDKWTPDNPEEDVGIGLKVDYGRYYASKTFFDQS 387
Query: 393 KKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNST 452
K+RRI++GW+NETD+E+DDLEKGWAS+QTIPR+VLYDNKTG++++QWPVEE+ESLR N+T
Sbjct: 388 KQRRILYGWVNETDSEADDLEKGWASIQTIPRSVLYDNKTGTHLLQWPVEEVESLRLNAT 447
Query: 453 VFEEVVVEPGSVVPLDIGVATQV-ILHTISLKLLV 486
VF++VVVE GSVVPLDIG ATQ+ IL ++ LV
Sbjct: 448 VFKDVVVEAGSVVPLDIGTATQLDILAEFEIETLV 482
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|268526570|gb|ACZ05614.1| vacuolar invertase 2 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/488 (70%), Positives = 395/488 (80%), Gaps = 30/488 (6%)
Query: 1 MDTPYHHLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQT 60
M+ Y PP + PLL D +P + R FAAI A + LL L+ALIINQ
Sbjct: 1 MEASYDPEQNPPLHAPLL------DRSSPRTRR-----FAAIFACLVSLLLLLALIINQA 49
Query: 61 QKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS 120
Q+P F +PRGVAEGVSAKSN LL + +NWTNAMF+WQR++
Sbjct: 50 QQP---------------FEKVQPRGVAEGVSAKSNPSLLNQVP--FNWTNAMFSWQRSA 92
Query: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV 180
+HFQP+KNWMNDPNGPL++KGWYHLFYQYNP SA+WGNITWGHAVS DLIHWLYLP+A+V
Sbjct: 93 YHFQPQKNWMNDPNGPLYHKGWYHLFYQYNPYSAIWGNITWGHAVSRDLIHWLYLPLALV 152
Query: 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN 240
PD WYDI GVWTGSATIL DGQI+MLYTG T++SVQVQNLAYPA+ SDPLLL W+KYPGN
Sbjct: 153 PDHWYDIKGVWTGSATILADGQIIMLYTGETNESVQVQNLAYPANVSDPLLLHWLKYPGN 212
Query: 241 PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT-GISLVYQTTDFKTYELLDEY 299
PV+VPP + P DFRDPTTAW GPDG WRLT+GSK T GISLVY TT+F+ YELLD
Sbjct: 213 PVMVPPPGVKPDDFRDPTTAWLGPDGTWRLTMGSKFDTTIGISLVYHTTNFRDYELLDGV 272
Query: 300 LHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPAN 359
LHAVPGTGMWECVDFYPVAINGSV LDTS+ GPGIKHVLKASLD+TKVDHYAIGTY+P
Sbjct: 273 LHAVPGTGMWECVDFYPVAINGSVALDTSSLGPGIKHVLKASLDNTKVDHYAIGTYDPIT 332
Query: 360 DKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASV 419
DKWTPDNPEEDVGIGLK DYGRYYASK+F+D +K+RR++WGWINETDTE+ DL+KGWAS+
Sbjct: 333 DKWTPDNPEEDVGIGLKVDYGRYYASKTFFDQHKQRRVLWGWINETDTETADLKKGWASL 392
Query: 420 QTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQV-ILH 478
QTIPRTVLYDNKTG+N++QWPVEE+ESLR NST+F+EV+VEPGSVVPLDIG TQ+ IL
Sbjct: 393 QTIPRTVLYDNKTGTNLLQWPVEEVESLRLNSTMFKEVLVEPGSVVPLDIGTTTQLDILA 452
Query: 479 TISLKLLV 486
++ L+
Sbjct: 453 EFEIEPLI 460
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|116744388|dbj|BAF35858.1| Soluble acid invertase [Pyrus pyrifolia var. culta] | Back alignment and taxonomy information |
|---|
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/484 (69%), Positives = 385/484 (79%), Gaps = 17/484 (3%)
Query: 1 MDTPYHHLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQT 60
MDT + +AP LP E PS A P +HR+PFKGFA I +S IFLLSLV L+INQ
Sbjct: 1 MDTTNNTSYAP------LPGEDPSAAVPPPTHRRPFKGFAVIFSSVIFLLSLVTLVINQG 54
Query: 61 Q----KPLPSQNNIVPTSKPTSFSNPE-----PRGVAEGVSAKSNSHLLRNIKGSYNWTN 111
K +P Q + +P S S+ PRG EGVSAKS H + SYNWTN
Sbjct: 55 PGSPPKTVPEQPDHHHQYRPASTSSETRSFSVPRGKLEGVSAKSYPHFSED--ASYNWTN 112
Query: 112 AMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIH 171
AMF+WQRT+FHFQPEKNW+NDPNGPLF+KGWYHLFYQYNPDSAVWGNITWGHAVS D+IH
Sbjct: 113 AMFSWQRTAFHFQPEKNWINDPNGPLFHKGWYHLFYQYNPDSAVWGNITWGHAVSTDMIH 172
Query: 172 WLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLL 231
WLYLP+AMVPD+W+D NGVWTGSAT+LPDGQI+MLYTGST++SVQVQNLAYPA+ SDPLL
Sbjct: 173 WLYLPLAMVPDRWFDANGVWTGSATLLPDGQIIMLYTGSTNESVQVQNLAYPANLSDPLL 232
Query: 232 LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFK 291
LDWVKY GNP+L PP IG DFRDPTTAW GPDGKWR+TIGSK TGIS+VY T DF
Sbjct: 233 LDWVKYEGNPILTPPSGIGSTDFRDPTTAWIGPDGKWRITIGSKFNTTGISMVYTTNDFI 292
Query: 292 TYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYA 351
YEL + LH VPGTGMWECVDFYPVAINGS GLDTS IKHVLKASLDDTK+DHYA
Sbjct: 293 NYELHNGVLHEVPGTGMWECVDFYPVAINGSKGLDTSVNSGRIKHVLKASLDDTKLDHYA 352
Query: 352 IGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDD 411
IGTY N+ W PD+P DVGIGL++DYGRYYASK+FYD K RRI+ GW+NETDTE+DD
Sbjct: 353 IGTYFIENETWVPDDPTIDVGIGLRYDYGRYYASKTFYDQNKDRRILLGWVNETDTETDD 412
Query: 412 LEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGV 471
L+K WAS+ TIP+TVL+D+KTG+N++QWPVEEIE LR NST F +V+VE G++VPLDIG
Sbjct: 413 LKKHWASLHTIPKTVLFDSKTGTNLLQWPVEEIEDLRLNSTEFTDVLVEAGTIVPLDIGT 472
Query: 472 ATQV 475
ATQ+
Sbjct: 473 ATQL 476
|
Source: Pyrus pyrifolia var. culta Species: Pyrus pyrifolia Genus: Pyrus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|186397271|dbj|BAG30919.1| soluble acid invertase [Pyrus pyrifolia] | Back alignment and taxonomy information |
|---|
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/484 (69%), Positives = 384/484 (79%), Gaps = 17/484 (3%)
Query: 1 MDTPYHHLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQT 60
MDT + +AP LP E PS A P +HR+PFKGFA I S IFLLSLV L+INQ
Sbjct: 1 MDTTNNTSYAP------LPGEDPSAAVPPPTHRRPFKGFAVIFPSVIFLLSLVTLVINQG 54
Query: 61 Q----KPLPSQNNIVPTSKPTSFSNPE-----PRGVAEGVSAKSNSHLLRNIKGSYNWTN 111
K +P Q + +P S S+ PRG EGVSAKS H + SYNWTN
Sbjct: 55 PGSPPKTVPEQPDHHHQYRPASTSSETRSFSVPRGKLEGVSAKSYPHFSED--ASYNWTN 112
Query: 112 AMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIH 171
AMF+WQRT+FHFQPEKNW+NDPNGPLF+KGWYHLFYQYNPDSAVWGNITWGHAVS D+IH
Sbjct: 113 AMFSWQRTAFHFQPEKNWINDPNGPLFHKGWYHLFYQYNPDSAVWGNITWGHAVSTDMIH 172
Query: 172 WLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLL 231
WLYLP+AMVPD+W+D NGVWTGSAT+LPDGQI+MLYTGST++SVQVQNLAYPA+ SDPLL
Sbjct: 173 WLYLPLAMVPDRWFDANGVWTGSATLLPDGQIIMLYTGSTNESVQVQNLAYPANLSDPLL 232
Query: 232 LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFK 291
LDWVKY GNP+L PP IG DFRDPTTAW GPDGKWR+TIGSK TGIS+VY T DF
Sbjct: 233 LDWVKYEGNPILTPPSGIGSTDFRDPTTAWIGPDGKWRITIGSKFNTTGISMVYTTNDFI 292
Query: 292 TYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYA 351
YEL + LH VPGTGMWECVDFYPVAINGS GLDTS IKHVLKASLDDTK+DHYA
Sbjct: 293 NYELHNGVLHEVPGTGMWECVDFYPVAINGSKGLDTSVNSGRIKHVLKASLDDTKLDHYA 352
Query: 352 IGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDD 411
IGTY N+ W PD+P DVGIGL++DYGRYYASK+FYD K RRI+ GW+NETDTE+DD
Sbjct: 353 IGTYFIENETWVPDDPTIDVGIGLRYDYGRYYASKTFYDQNKDRRILLGWVNETDTETDD 412
Query: 412 LEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGV 471
L+K WAS+ TIPRTVL+D+KTG+N++QWPVEEIE LR NST F +V+VE G++VPLDIG
Sbjct: 413 LKKHWASLHTIPRTVLFDSKTGTNLLQWPVEEIEDLRLNSTEFTDVLVEAGTIVPLDIGT 472
Query: 472 ATQV 475
ATQ+
Sbjct: 473 ATQL 476
|
Source: Pyrus pyrifolia Species: Pyrus pyrifolia Genus: Pyrus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 494 | ||||||
| TAIR|locus:2026177 | 648 | AT1G62660 [Arabidopsis thalian | 0.793 | 0.604 | 0.671 | 8.5e-152 | |
| TAIR|locus:2201966 | 664 | ATBETAFRUCT4 [Arabidopsis thal | 0.777 | 0.578 | 0.664 | 5.4e-150 | |
| UNIPROTKB|Q9FSV7 | 654 | 1-SST "Sucrose:sucrose 1-fruct | 0.775 | 0.585 | 0.559 | 9.5e-121 | |
| TAIR|locus:2091606 | 584 | ATBFRUCT1 [Arabidopsis thalian | 0.722 | 0.611 | 0.521 | 7.7e-103 | |
| TAIR|locus:2049445 | 591 | cwINV4 "cell wall invertase 4" | 0.672 | 0.561 | 0.517 | 1.2e-97 | |
| TAIR|locus:2079944 | 590 | CWINV2 "cell wall invertase 2" | 0.668 | 0.559 | 0.522 | 4.1e-97 | |
| TAIR|locus:2205677 | 594 | FRUCT5 "beta-fructofuranosidas | 0.668 | 0.555 | 0.517 | 3e-94 | |
| TAIR|locus:2143099 | 550 | cwINV6 "6-&1-fructan exohydrol | 0.670 | 0.601 | 0.486 | 8.3e-90 | |
| UNIPROTKB|Q4KBP1 | 499 | scrB "Sucrose-6-phosphate hydr | 0.615 | 0.609 | 0.302 | 2.2e-34 | |
| UNIPROTKB|Q48BH6 | 497 | scrB "Sucrose-6-phosphate hydr | 0.587 | 0.583 | 0.304 | 4.1e-33 |
| TAIR|locus:2026177 AT1G62660 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1481 (526.4 bits), Expect = 8.5e-152, P = 8.5e-152
Identities = 268/399 (67%), Positives = 312/399 (78%)
Query: 83 EPRGVAEGVSAKSNSHL-LRNIKG---SYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLF 138
E R GVS KSN + + + G ++ W N + +WQRT+FHFQPEKNWMNDPNGPLF
Sbjct: 67 ESRPRMAGVSEKSNDGVWISSDDGKVEAFPWNNTILSWQRTAFHFQPEKNWMNDPNGPLF 126
Query: 139 YKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATIL 198
YKGWYH FYQYNP++AVWG+I WGHAVS DLIHWLYLPIAMVPDQWYD NGVWTGSAT L
Sbjct: 127 YKGWYHFFYQYNPNAAVWGDIVWGHAVSKDLIHWLYLPIAMVPDQWYDANGVWTGSATFL 186
Query: 199 PDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPT 258
DG IVMLYTGSTD+ VQVQNLAYP DPSDPLLL WVK+ GNPVLVPP IG KDFRDPT
Sbjct: 187 DDGSIVMLYTGSTDEFVQVQNLAYPEDPSDPLLLKWVKFSGNPVLVPPPGIGAKDFRDPT 246
Query: 259 TAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318
TAW GKWR+TIGSKI +TGISL+Y TTDFKTYE + LH VP TGMWECVDFYPV+
Sbjct: 247 TAWKTSSGKWRITIGSKINRTGISLIYDTTDFKTYEKHETLLHQVPNTGMWECVDFYPVS 306
Query: 319 INGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVGI--GLK 376
GLDTS GP +KHV+KAS+DDT++DHYAIGTY+ +N W PDNP DVGI GL+
Sbjct: 307 KTQLNGLDTSVNGPDVKHVIKASMDDTRIDHYAIGTYDDSNATWVPDNPSIDVGISTGLR 366
Query: 377 WDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGSNV 436
+DYG+YYASK+FYD K RRI+WGWI E+D+E+ D++KGW+SVQ IPRTV+ D +T N+
Sbjct: 367 YDYGKYYASKTFYDQNKGRRILWGWIGESDSEAADVQKGWSSVQGIPRTVVLDTRTHKNL 426
Query: 437 VQWPVEEIESLRQNSTXXXXXXXXXXXXXPLDIGVATQV 475
VQWPVEEI+SLR +S P+D+G ATQ+
Sbjct: 427 VQWPVEEIKSLRLSSKKFDMTIGPGTVV-PVDVGSATQL 464
|
|
| TAIR|locus:2201966 ATBETAFRUCT4 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1464 (520.4 bits), Expect = 5.4e-150, P = 5.4e-150
Identities = 261/393 (66%), Positives = 308/393 (78%)
Query: 90 GVSAKSNSHLLRNIKGSYN-----WTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYH 144
GVS K N L + + G N W N+M +WQRT+FHFQPE+NWMNDPNGPLFYKGWYH
Sbjct: 89 GVSEKRNDGLWK-LSGDRNTPAFEWNNSMLSWQRTAFHFQPEQNWMNDPNGPLFYKGWYH 147
Query: 145 LFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIV 204
FYQYNP++AVWG+I WGHAVS DLIHW++LPIAMV DQWYD NGVWTGSAT LPDG IV
Sbjct: 148 FFYQYNPNAAVWGDIVWGHAVSRDLIHWVHLPIAMVADQWYDSNGVWTGSATFLPDGSIV 207
Query: 205 MLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGP 264
MLYTGSTDK+VQVQNLAYP DP+DPLLL WVK+PGNPVLVPP I PKDFRDPTTAW
Sbjct: 208 MLYTGSTDKAVQVQNLAYPEDPNDPLLLKWVKFPGNPVLVPPPGILPKDFRDPTTAWKTS 267
Query: 265 DGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVG 324
+GKWR+TIGSK+ KTGISLVY T DFKTYE LD LH VP TGMWECVDFYPV+ G
Sbjct: 268 EGKWRITIGSKLNKTGISLVYDTIDFKTYEKLDTLLHRVPNTGMWECVDFYPVSKTAGNG 327
Query: 325 LDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVGI--GLKWDYGRY 382
LDTS GP +KH++KAS+DDT+ DHYA+GTY +N W PD+P DVG+ L++DYG++
Sbjct: 328 LDTSVNGPDVKHIVKASMDDTRFDHYAVGTYFDSNGTWIPDDPTIDVGMTASLRYDYGKF 387
Query: 383 YASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVE 442
YASKSFYD K RR++W WI E+D+E+ D++KGW+S+Q IPRTV+ D KTG N+VQWPVE
Sbjct: 388 YASKSFYDQNKGRRVLWSWIGESDSEASDVQKGWSSLQGIPRTVVLDTKTGKNLVQWPVE 447
Query: 443 EIESLRQNSTXXXXXXXXXXXXXPLDIGVATQV 475
EI+SLR +S P+D+G A Q+
Sbjct: 448 EIKSLRLSSKQFDLEVGPGSVV-PVDVGSAAQL 479
|
|
| UNIPROTKB|Q9FSV7 1-SST "Sucrose:sucrose 1-fructosyltransferase" [Festuca arundinacea (taxid:4606)] | Back alignment and assigned GO terms |
|---|
Score = 1188 (423.3 bits), Expect = 9.5e-121, P = 9.5e-121
Identities = 221/395 (55%), Positives = 279/395 (70%)
Query: 65 PSQNNIVPTSKPT-SFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTSFHF 123
P+ ++ + P P RG GVS K++ + G + W+NAM WQRT FHF
Sbjct: 70 PAGGDVASAAVPAVPMEIPRSRGKDFGVSEKASGAY--SADGGFPWSNAMLQWQRTGFHF 127
Query: 124 QPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ 183
QPEK++MNDPNGP++Y GWYHLFYQYNP WGNI W HAVS D+++W +LP+AMVPDQ
Sbjct: 128 QPEKHYMNDPNGPVYYGGWYHLFYQYNPKGDSWGNIAWAHAVSKDMVNWRHLPLAMVPDQ 187
Query: 184 WYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVL 243
WYD NGV TGS T+LPDGQ+++LYTG+TD QVQ LA PADPSDPLL +W+K+P NP+L
Sbjct: 188 WYDSNGVLTGSITVLPDGQVILLYTGNTDTLAQVQCLATPADPSDPLLREWIKHPANPIL 247
Query: 244 VPPRHIGPKDFRDPTTAWAG-PDGKWRLTIGSKI--GKTGISLVYQTTDFKTYELLDEYL 300
PP IG KDFRDP TAW D WR IGSK G GI L Y+T DF YEL+ +
Sbjct: 248 YPPPGIGLKDFRDPLTAWFDHSDNTWRTVIGSKDDDGHAGIILSYKTKDFVNYELMPGNM 307
Query: 301 HAVP-GTGMWECVDFYPVAINGS--VGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNP 357
H P GTGM+EC+D YPV N S +G D S P + VLK S DD + D+YA+G ++
Sbjct: 308 HRGPDGTGMYECIDLYPVGGNSSEMLGGDDS---PDVLFVLKESSDDERHDYYALGRFDA 364
Query: 358 ANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWA 417
A + WTP + E D+GIGL++D+G+YYASKSFYD K RRIVW +I ETD+E D+ KGWA
Sbjct: 365 AANIWTPIDQELDLGIGLRYDWGKYYASKSFYDQKKNRRIVWAYIGETDSEQADITKGWA 424
Query: 418 SVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNST 452
++ TIPRTV D KT +N++QWPVEE+++LR+NST
Sbjct: 425 NLMTIPRTVELDKKTRTNLIQWPVEELDTLRRNST 459
|
|
| TAIR|locus:2091606 ATBFRUCT1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1019 (363.8 bits), Expect = 7.7e-103, P = 7.7e-103
Identities = 190/364 (52%), Positives = 248/364 (68%)
Query: 91 VSAKSNSHLLRNIKGSYNWTNAMFTWQ-RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQY 149
V+ +++ H+ + + S N + RT FHFQP KNWMNDPNGP+ YKG YHLFYQ+
Sbjct: 24 VNLEASHHVYKRLTQSTNTKSPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQW 83
Query: 150 NPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTG 209
NP AVWGNI W H+ S DLI+W P A+ P +DING W+GSATILP+G+ V+LYTG
Sbjct: 84 NPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTG 143
Query: 210 STDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP--RHIGPKDFRDPTTAWAGPDGK 267
K+ QVQN+A P + SDP L +W K P NP++ P I FRDPTTAW G D K
Sbjct: 144 IDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKK 203
Query: 268 WRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDT 327
WR+ IGSKI + G+++ Y + DF +E E LH G+GMWEC DF+PV GS G++T
Sbjct: 204 WRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVET 263
Query: 328 SATG-PG--IKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYA 384
S+ G P +KHVLK SLDDTK D+Y IGTY+ DK+ PDN + G ++DYG+YYA
Sbjct: 264 SSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYA 323
Query: 385 SKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEI 444
SK+F+D K RRI+WGW NE+ + DD+EKGW+ +QTIPR + D ++G ++QWPV E+
Sbjct: 324 SKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLD-RSGKQLIQWPVREV 382
Query: 445 ESLR 448
E LR
Sbjct: 383 ERLR 386
|
|
| TAIR|locus:2049445 cwINV4 "cell wall invertase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 970 (346.5 bits), Expect = 1.2e-97, P = 1.2e-97
Identities = 173/334 (51%), Positives = 222/334 (66%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
R SFHFQP K+W+NDPNGP++YKG YHLFYQYN AVWGNI W H+VS DL++W L
Sbjct: 50 RPSFHFQPPKHWINDPNGPVYYKGLYHLFYQYNTKGAVWGNIIWAHSVSKDLVNWEALEP 109
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKY 237
A+ P +W+DI G W+GS TI+P ++LYTG Q+QN A P DPSDP L W+K
Sbjct: 110 ALSPSKWFDIGGTWSGSITIVPGKGPIILYTGVNQNETQLQNYAIPEDPSDPYLRKWIKP 169
Query: 238 PGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLD 297
NP+ +P + FRDPTTAW DG WR +GSK + GI+ +Y++ DFK +
Sbjct: 170 DDNPIAIPDYTMNGSAFRDPTTAWFSKDGHWRTVVGSKRKRRGIAYIYRSRDFKHWVKAK 229
Query: 298 EYLHAVPGTGMWECVDFYPVAING-SVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYN 356
+H+ TGMWEC DF+PV++ GLD GP KHVLK SLD T+ ++Y +G Y+
Sbjct: 230 HPVHSKQSTGMWECPDFFPVSLTDFRNGLDLDYVGPNTKHVLKVSLDITRYEYYTLGKYD 289
Query: 357 PANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGW 416
D++ PD D GL++DYG +YASK+F+D K RRI+WGW NE+DT DD+ KGW
Sbjct: 290 LKKDRYIPDGNTPDGWEGLRFDYGNFYASKTFFDYKKNRRILWGWANESDTVEDDILKGW 349
Query: 417 ASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQN 450
A +Q IPRTVL D+ +V WPVEEIESLR N
Sbjct: 350 AGLQVIPRTVLLDSSK-KQLVFWPVEEIESLRGN 382
|
|
| TAIR|locus:2079944 CWINV2 "cell wall invertase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 965 (344.8 bits), Expect = 4.1e-97, P = 4.1e-97
Identities = 174/333 (52%), Positives = 224/333 (67%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
RT++HFQP ++W+NDPN P+ YKG YHLFYQYNP AVWGNI W H+VS DLI+W L
Sbjct: 48 RTAYHFQPPRHWINDPNAPMLYKGVYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEP 107
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKY 237
A+ P +W+DING W+GSAT +P V+LYTG T+ Q+QN A P D SDP L W+K
Sbjct: 108 AIYPSKWFDINGTWSGSATHVPGKGPVILYTGITENQTQIQNYAIPQDLSDPYLKTWIKP 167
Query: 238 PGNPVLVPPRHIGPKDFRDPTTAWAGP-DGKWRLTIGSKIGKTGISLVYQTTDFKTYELL 296
NP++ P FRDPTTAW DG WR+ +GSK GI+ +Y++ DFK +
Sbjct: 168 DDNPIVKPDNGENGSAFRDPTTAWFNKKDGYWRMLVGSKRKNRGIAYMYKSRDFKKWVKS 227
Query: 297 DEYLHAVPGTGMWECVDFYPVAINGSV-GLDTSATGPGIKHVLKASLDDTKVDHYAIGTY 355
+H+ TGMWEC DF+PV++ GLD S GP KHVLK SLD T+ ++Y +GTY
Sbjct: 228 KRPIHSRKKTGMWECPDFFPVSVTDKKNGLDFSYDGPNAKHVLKVSLDLTRYEYYTLGTY 287
Query: 356 NPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKG 415
+ D++ PD D GL++DYG YYASK+F+D RRI+WGW NE+DT DD KG
Sbjct: 288 DTKKDRYRPDGYTPDGWDGLRFDYGNYYASKTFFDDKTNRRILWGWANESDTVQDDTVKG 347
Query: 416 WASVQTIPRTVLYDNKTGSNVVQWPVEEIESLR 448
WA +Q IPRT+L D+ +G +V WP+EEIESLR
Sbjct: 348 WAGIQLIPRTILLDS-SGKQLVFWPIEEIESLR 379
|
|
| TAIR|locus:2205677 FRUCT5 "beta-fructofuranosidase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 938 (335.3 bits), Expect = 3.0e-94, P = 3.0e-94
Identities = 174/336 (51%), Positives = 228/336 (67%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWG-NITWGHAVSADLIHWLYLP 176
RT +HFQP KNWMNDPNGP+ YKG YHLFYQYNP AVW I WGH+ S DL++W+ P
Sbjct: 39 RTGYHFQPLKNWMNDPNGPMIYKGIYHLFYQYNPYGAVWDVRIVWGHSTSVDLVNWISQP 98
Query: 177 IAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVK 236
A P Q DING W+GS TILP+G+ V+LYTG QVQN+A P + SDP L +W K
Sbjct: 99 PAFNPSQPSDINGCWSGSVTILPNGKPVILYTGIDQNKGQVQNVAVPVNISDPYLREWSK 158
Query: 237 YPGNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG-KTGISLVYQTTDFKTY 293
P NP++ I P FRDPTTAW G DG+WR+ +GS + G++++Y++ DF +
Sbjct: 159 PPQNPLMTTNAVNGINPDRFRDPTTAWLGRDGEWRVIVGSSTDDRRGLAILYKSRDFFNW 218
Query: 294 ELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGP-GIKHVLKASLDDTKVDHYAI 352
+ LH TGMWEC DF+PV+I GS G++TS+ G GIKHVLK SL +T D+Y I
Sbjct: 219 TQSMKPLHYEDLTGMWECPDFFPVSITGSDGVETSSVGENGIKHVLKVSLIETLHDYYTI 278
Query: 353 GTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDL 412
G+Y+ D + PD + DYG+YYASK+FYD KKRRI+WGW+NE+ DD+
Sbjct: 279 GSYDREKDVYVPDLGFVQNESAPRLDYGKYYASKTFYDDVKKRRILWGWVNESSPAKDDI 338
Query: 413 EKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLR 448
EKGW+ +Q+ PR + D ++G ++QWP+EEIE+LR
Sbjct: 339 EKGWSGLQSFPRKIWLD-ESGKELLQWPIEEIETLR 373
|
|
| TAIR|locus:2143099 cwINV6 "6-&1-fructan exohydrolase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 896 (320.5 bits), Expect = 8.3e-90, P = 8.3e-90
Identities = 165/339 (48%), Positives = 227/339 (66%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGN--ITWGHAVSADLIHWLYL 175
RTSFHFQP++NW+NDPN P++YKG+YHLFYQ NP + + I WGH+VS D+++W+ L
Sbjct: 17 RTSFHFQPQRNWLNDPNAPMYYKGFYHLFYQNNPLAPEFSRTRIIWGHSVSQDMVNWIQL 76
Query: 176 PIAMVPDQWYDINGVWTGSATILPDGQIVMLYTG-STDKSVQVQNLAYPADPSDPLLLDW 234
A+VP + +DIN W+GSATILPDG+ V+LYTG + QV +A P D SDPLL +W
Sbjct: 77 EPALVPSESFDINSCWSGSATILPDGRPVILYTGLDVNNKQQVTVVAEPKDVSDPLLREW 136
Query: 235 VKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT--GISLVYQTTDFKT 292
VK NPV+VPP ++ FRDPT AW G DGKWR+ IG+K T G++++Y++ DF
Sbjct: 137 VKPKYNPVMVPPSNVPFNCFRDPTEAWKGQDGKWRVLIGAKEKDTEKGMAILYRSDDFVQ 196
Query: 293 YELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAI 352
+ L GTGMWEC DF+PV+I G G+DTS ++HVLKAS D Y I
Sbjct: 197 WTKYPVPLLESEGTGMWECPDFFPVSITGKEGVDTSVNNASVRHVLKASFGGN--DCYVI 254
Query: 353 GTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDL 412
G Y+ + ++ D + L++D+G +YASK+F+D K RRI WGW+ ETD++ DD
Sbjct: 255 GKYSSETEDFSADYEFTNTSADLRYDHGTFYASKAFFDSVKNRRINWGWVIETDSKEDDF 314
Query: 413 EKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNS 451
+KGWA + T+PR + D +G ++QWP+EEI +LR S
Sbjct: 315 KKGWAGLMTLPREIWMDT-SGKKLMQWPIEEINNLRTKS 352
|
|
| UNIPROTKB|Q4KBP1 scrB "Sucrose-6-phosphate hydrolase" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 105/347 (30%), Positives = 174/347 (50%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
R ++H P WMNDPNG ++++G YH+FYQ++P SA WG + WGHA S DL+HW +LPI
Sbjct: 33 RLAYHLAPPVGWMNDPNGLVYFRGEYHVFYQHHPYSAQWGPMHWGHAKSRDLVHWEHLPI 92
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTGST-------DKSV-QVQNLAYPADPSDP 229
A+ P + YD +G ++GSA ++ D + ++YTG T ++S+ QVQ LA D
Sbjct: 93 ALAPGEAYDRDGCFSGSAVVMDD-VLYLIYTGHTWLGAPGDERSIRQVQCLASSTDG--- 148
Query: 230 LLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTD 289
+ + K+ PV+ G FRDP W + +W + +G++ G L+Y++ D
Sbjct: 149 --VAFSKH--GPVIDRAPEPGIMHFRDPKV-WRRGE-QWWMALGARQGDAPQLLLYRSGD 202
Query: 290 FKTYELLDEYLHAV-PGTG-MWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD-TK 346
+ L L G MWEC D + + G D P + + + D+ K
Sbjct: 203 LHHWTYLRCALQGQRESDGYMWECPDLFELD-----GCDVFLYSP--QGLNPSGYDNWNK 255
Query: 347 VDH-YAIGTYNPANDKWTPDNPEEDVGIGLK-WDYGR-YYASKSFYDPYKKRRIVWGWIN 403
+ Y +G + D G L+ D+G +YA+++ P RR++W W++
Sbjct: 256 FQNSYRMGLLD--------DRGYFSEGGELRELDHGHDFYAAQTLLAP-DGRRLLWAWMD 306
Query: 404 ETDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQN 450
D+ + W ++PR + ++ G + P E+ +LRQ+
Sbjct: 307 MWDSPMPSQAQHWCGALSLPREL---SRNGERLRMRPARELAALRQS 350
|
|
| UNIPROTKB|Q48BH6 scrB "Sucrose-6-phosphate hydrolase" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] | Back alignment and assigned GO terms |
|---|
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 99/325 (30%), Positives = 163/325 (50%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
R +H P WMNDPNG ++++G YH+FYQ++P A WG + WGHA SADL+HW +LPI
Sbjct: 28 RPGYHLAPPAGWMNDPNGVVYFRGEYHVFYQHHPFDAKWGPMYWGHAKSADLVHWQHLPI 87
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTGST------DKSV--QVQNLAYPADPSDP 229
A+ P +D +G ++GSA + D + ++YTG T D+ + QVQ LA D
Sbjct: 88 ALAPGDDFDQDGCFSGSAVVCGD-TLALIYTGHTWLGEVGDELLIRQVQCLATSLDG--- 143
Query: 230 LLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTD 289
+++VK+ G + PP+ FRDP W D W L G+++G + +Y++ D
Sbjct: 144 --INFVKH-GAVIDSPPQDT-IIHFRDPKV-WQ-QDDHWYLIAGARLGDRPLLPLYRSVD 197
Query: 290 FKTYELLDEYLHAVPGTG-MWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVD 348
+E + G G MWEC D + ++G L S G + + + T
Sbjct: 198 LHAWEFVSYVSSGNEGDGYMWECPDLF--RLDGRDVLLYSPQGMPAQGYERLNKFHTG-- 253
Query: 349 HYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWINETDT 407
Y +G + + + G ++ D G +YA+++ RR+VW W++ ++
Sbjct: 254 -YRVGQIDSQR--------QFNGGPFIELDNGHDFYAAQTLVAA-DGRRLVWAWLDMWES 303
Query: 408 ESDDLEKGWASVQTIPRTV-LYDNK 431
+ W + +PR + L D++
Sbjct: 304 PTPTATHLWRGMLGLPRELELRDDR 328
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q39041 | INVA4_ARATH | 3, ., 2, ., 1, ., 2, 6 | 0.6150 | 0.9089 | 0.6762 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 494 | |||
| smart00640 | 437 | smart00640, Glyco_32, Glycosyl hydrolases family 3 | 1e-157 | |
| pfam00251 | 305 | pfam00251, Glyco_hydro_32N, Glycosyl hydrolases fa | 1e-151 | |
| cd08996 | 298 | cd08996, GH32_B_Fructosidase, Glycosyl hydrolase f | 7e-95 | |
| COG1621 | 486 | COG1621, SacC, Beta-fructosidases (levanase/invert | 9e-68 | |
| TIGR01322 | 445 | TIGR01322, scrB_fam, sucrose-6-phosphate hydrolase | 4e-47 | |
| pfam11837 | 106 | pfam11837, DUF3357, Domain of unknown function (DU | 3e-32 | |
| cd08772 | 286 | cd08772, GH43_62_32_68, Glycosyl hydrolase familie | 1e-28 | |
| cd08979 | 276 | cd08979, GH_J, Glycosyl hydrolase families 32 and | 2e-16 | |
| cd08995 | 280 | cd08995, GH32_Aec43_like, Glycosyl hydrolase famil | 1e-15 |
| >gnl|CDD|214757 smart00640, Glyco_32, Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Score = 454 bits (1169), Expect = e-157
Identities = 174/360 (48%), Positives = 226/360 (62%), Gaps = 23/360 (6%)
Query: 122 HFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVP 181
HFQP K WMNDPNG ++YKG YHLFYQYNP AVWGNI WGHAVS DL+HW +LP+A+ P
Sbjct: 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGAVWGNIHWGHAVSKDLVHWTHLPVALAP 60
Query: 182 DQWYDINGVWTGSATILPDGQIVMLYTGST--DKSVQVQNLAYPADPSDPLLLDWVKYPG 239
D+WYD NGV++GSA I P + +LYTG+ D +VQVQ AY SD L W KY G
Sbjct: 61 DEWYDSNGVFSGSAVIDPGN-LSLLYTGNVAIDTNVQVQRQAYQCAASDDLGGTWTKYDG 119
Query: 240 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIG-SKIGKTGISLVYQTTDFKTYELLDE 298
NPVL PP G + FRDP W D KW + IG S K GI+L+Y++TD K + LL E
Sbjct: 120 NPVLTPPPGGGTEHFRDPKVFWYDGD-KWYMVIGASDEDKRGIALLYRSTDLKNWTLLSE 178
Query: 299 YLHAVPG--TGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYN 356
+LH++ G GMWEC D +P+ G KHVLK S ++Y +G ++
Sbjct: 179 FLHSLLGDTGGMWECPDLFPL----------PGEGDTSKHVLKVSPQGGSGNYYFVGYFD 228
Query: 357 PANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWINETDTESDDLE-K 414
+D +TPD+P D G GL+ DYG +YAS++FYDP RRI+ GW+ D+ +DD+ K
Sbjct: 229 G-DDTFTPDDP-VDTGHGLRLDYGFDFYASQTFYDPDGNRRILIGWMGNWDSYADDVPTK 286
Query: 415 GWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQ 474
GWA ++PR + D TG ++QWPVEE+ESLR N + ++ GSV L A+
Sbjct: 287 GWAGALSLPRELTLD-LTGGKLLQWPVEELESLR-NKKELLNLTLKNGSVTELLGLTASG 344
|
Length = 437 |
| >gnl|CDD|215819 pfam00251, Glyco_hydro_32N, Glycosyl hydrolases family 32 N-terminal domain | Back alignment and domain information |
|---|
Score = 432 bits (1113), Expect = e-151
Identities = 164/327 (50%), Positives = 214/327 (65%), Gaps = 30/327 (9%)
Query: 122 HFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVP 181
HFQP K WMNDPNG ++YKG YHLFYQYNP AVWGN WGHAVS DL+HW +LP+A+ P
Sbjct: 1 HFQPPKGWMNDPNGLVYYKGEYHLFYQYNPFGAVWGNKHWGHAVSKDLVHWEHLPVALAP 60
Query: 182 DQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNP 241
D+WYD NG ++GSA +LPD +V+LYTG+TD+S QVQ LAY AD W KYPGNP
Sbjct: 61 DEWYDSNGCFSGSAVVLPD-NLVLLYTGNTDRSTQVQCLAYSADDG----RTWTKYPGNP 115
Query: 242 VLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG-KTGISLVYQTTDFKTYELLDEYL 300
V++ P K FRDP AW PDGKW + +G++ K G +L+Y++ D K +ELL E L
Sbjct: 116 VIINPPPGYTKHFRDPKVAWYEPDGKWYMVLGAQDNDKRGKALLYRSKDLKNWELLGELL 175
Query: 301 HAVP-GTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD---DTKVDHYAIGTYN 356
H+VP G GMWEC D +PV D GP +KHVLK S + D+Y IGT++
Sbjct: 176 HSVPDGGGMWECPDLFPV--------DGKDNGP-VKHVLKFSPQGYQNGYQDYYFIGTFD 226
Query: 357 PANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWINETDTESDDL--E 413
D +TP + + DYG +YAS++FYDP +RRI+ GW+ E D+E+DD+
Sbjct: 227 ADGDTFTPPDEQR-------LDYGFDFYASQTFYDPDGRRRILIGWMGEWDSEADDVPTT 279
Query: 414 KGWASVQTIPRTVLYDNKTGSNVVQWP 440
KGWA +IPR + ++ G ++QWP
Sbjct: 280 KGWAGALSIPRELTLKDE-GGKLLQWP 305
|
This domain corresponds to the N-terminal domain of glycosyl hydrolase family 32 which forms a five bladed beta propeller structure. Length = 305 |
| >gnl|CDD|185737 cd08996, GH32_B_Fructosidase, Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Score = 289 bits (741), Expect = 7e-95
Identities = 122/328 (37%), Positives = 164/328 (50%), Gaps = 42/328 (12%)
Query: 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDI 187
WMNDPNG +++ G YHLFYQYNP VWGN+ WGHA S DL+HW +LP+A+ PD YD
Sbjct: 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDS 60
Query: 188 NGVWTGSATILPDGQIVMLYTGSTD---KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLV 244
G ++GSA + +G++V+ YTG+ Q Q LAY S + KY GNPV+
Sbjct: 61 GGCFSGSAVVDDNGKLVLFYTGNVKLDGGRRQTQCLAY----STDDGRTFTKYEGNPVIP 116
Query: 245 PPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISLVYQTTDFKTYELLDEYL-HA 302
PP FRDP W DGKW + +G+ TG L+Y++ D K +E L E L
Sbjct: 117 PP-DGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRILLYRSDDLKNWEYLGELLTSL 173
Query: 303 VPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDH------YAIGTYN 356
MWEC D +P+ + G K VL S + + Y +G ++
Sbjct: 174 GDFGYMWECPDLFPLDVEG-------------KWVLIFSPQGLEPEGNGSGTGYLVGDFD 220
Query: 357 PANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWINETDTESDDLEKG 415
+ E DYG +YA ++F DP RRI+ GW+ D E E G
Sbjct: 221 GTTFTFDHTEFGE-------LDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDG 272
Query: 416 WASVQTIPRTVLYDNKTGSNVVQWPVEE 443
WA T+PR + K G + Q PV E
Sbjct: 273 WAGCLTLPRELSL--KDGGRLYQRPVRE 298
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. These enzymes are predicted to display a 5-fold beta-propeller fold as found for GH43 and CH68. The breakdown of sucrose is widely used as a carbon or energy source by bacteria, fungi, and plants. Invertase is used commercially in the confectionery industry, since fructose has a sweeter taste than sucrose and a lower tendency to crystallize. A common structural feature of all these enzymes is a 5-bladed beta-propeller domain, similar to GH43, that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. Length = 298 |
| >gnl|CDD|224536 COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 224 bits (574), Expect = 9e-68
Identities = 122/379 (32%), Positives = 185/379 (48%), Gaps = 45/379 (11%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
R +HF P W+NDPNG +++ G YHLFYQYNP A G WGHAVS DL+HW +LPI
Sbjct: 29 RPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDLVHWEHLPI 88
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKS----VQVQNLAYPADPSDPLLLD 233
A+ PD YD +G ++GSA ++ DG + + YTG+ S Q Q +AY D
Sbjct: 89 ALAPDDDYDSHGCYSGSA-VVDDGNLSLFYTGNVRDSNGIRQQTQCIAYSED-----GGT 142
Query: 234 WVKYPGNPVL-VPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK-IGKTGISLVYQTTDFK 291
+ KY GNP++ P + FRDP W GKW + +G++ G L+Y++ D K
Sbjct: 143 FEKYSGNPIIDQPEGYT--PHFRDPKVVW-DEGGKWWMMLGAQGEDLKGTILLYESDDLK 199
Query: 292 TYELLDEYLHAVPGTG-MWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDH- 349
++ E+ G G MWEC D + + +G L G I + +
Sbjct: 200 NWQFTGEFGLEQGGLGYMWECPDLFEL--DGEDVLLFWPQGLSING-----GEYDNIYQS 252
Query: 350 -YAIGTYNPANDKWTPDNPEEDVGIGLKW-DYGR-YYASKSFYDPYKKRRIVWGWIN--- 403
Y +G ++ + D+ + + D+G +YA ++F DP RRI+ GW+
Sbjct: 253 GYFVGDFDGKE--FKLDDGQ------FRELDFGFDFYAPQTFLDPD-GRRILIGWMGNWD 303
Query: 404 -ETDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPG 462
+ + D +GW T+PR + ++ + Q PV E+ESLR+ +
Sbjct: 304 YTNNYPTID--EGWRGAMTLPRELTLEDGK---LYQTPVRELESLRKPEEAAHNTTLSGN 358
Query: 463 SVVPLDIGVATQVILHTIS 481
S + L G A ++ L I
Sbjct: 359 SKLELPSGDAYELDLDLIW 377
|
Length = 486 |
| >gnl|CDD|233357 TIGR01322, scrB_fam, sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Score = 169 bits (429), Expect = 4e-47
Identities = 110/348 (31%), Positives = 166/348 (47%), Gaps = 43/348 (12%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
R +FH QP+ +NDPNG +++KG YHLFYQ+ P V G +WGH S DL+HW +
Sbjct: 14 RPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDEGV 73
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTG----STDKSVQVQNLAYPADPSDPLLLD 233
A+ PD YD +G ++GSA + +GQ+ ++YTG S Q LA D
Sbjct: 74 ALAPDDPYDSHGCYSGSA-VDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGH----- 127
Query: 234 WVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK-IGKTGISLVYQTTDFKT 292
+ G V+ P FRDP W +G W + IG++ + G L+Y++ D K
Sbjct: 128 -FEKFGIVVIELPPAGYTAHFRDPKV-WK-HNGHWYMVIGAQTETEKGSILLYRSKDLKN 184
Query: 293 YELLDEYL-HAVPGTG----MWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTK- 346
+ + E L G MWEC D + ++G L S G L AS D +
Sbjct: 185 WTFVGEILGDGQNGLDDRGYMWECPDLFS--LDGQDVLLFSPQG------LDASGYDYQN 236
Query: 347 --VDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWIN 403
+ Y +G + ++T + + DYG +YA ++F P RRI+ W+
Sbjct: 237 IYQNGYIVGQLDYEAPEFT---HGTEF---HELDYGFDFYAPQTFLAP-DGRRILVAWMG 289
Query: 404 ETDTESDDLEKGWASVQTIPRTV-LYDNKTGSNVVQWPVEEIESLRQN 450
+ + GWA T+PR + L D K +VQ P+ E+++LR
Sbjct: 290 LPEIDYPTDRDGWAHCMTLPRELTLKDGK----LVQTPLRELKALRTE 333
|
[Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 445 |
| >gnl|CDD|221256 pfam11837, DUF3357, Domain of unknown function (DUF3357) | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 3e-32
Identities = 44/108 (40%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 7 HLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQTQKPLPS 66
P Y PL P+ S G P R+P KG A+L+S +FLLSLVAL+I Q P
Sbjct: 1 LETLPYSYTPL-PDGDESAGGPPPRRRRPLKGLLAVLSSLLFLLSLVALLILNGQPPDGD 59
Query: 67 QNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMF 114
+ + P RGV+EGVS KSN L S+ WTNAM
Sbjct: 60 VVLVSSPETSPETAAPVSRGVSEGVSEKSNGALAGA-DASFPWTNAML 106
|
This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is typically between 96 to 119 amino acids in length. Length = 106 |
| >gnl|CDD|185718 cd08772, GH43_62_32_68, Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 1e-28
Identities = 72/311 (23%), Positives = 106/311 (34%), Gaps = 45/311 (14%)
Query: 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPD----QWYD 186
DPN + Y G Y++F+ + + GN HA S DL++W P+A+V D
Sbjct: 1 ADPN-LIKYNGTYYIFFSGDDKN---GNPGIAHATSKDLVNWTDHPVALVWWARRGGPKD 56
Query: 187 INGVWTGSATILPDGQIVMLYTGSTDKSV-QVQNLAYPADPSDPLLLDWVKYPGNPVLVP 245
G+W S + +G+ + YT + Q +A D + P V
Sbjct: 57 SGGIWAPSIVYIENGKFYLYYTDVSFTKNQQTIGVATAEDGNGPWTDYIGG------PVL 110
Query: 246 PRHIGPKD---FRDPTTAWAGPDGKWRLTIGSKIGKT-GISLVYQTTDFKTYELLDEYL- 300
P + D FRDP DGKW L GS G +Y++ D T++ L
Sbjct: 111 PDNPPAADVSNFRDPFVFED-DDGKWYLVFGSGDHHNFGGIFLYESDDDTTWKKGSAELL 169
Query: 301 -HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIG-TYNPA 358
G E NG K+ L S++ T Y +
Sbjct: 170 ISEGEGGKQIEGPGLLK--KNG-------------KYYLFYSINGTGRVDSTYSIGYARS 214
Query: 359 NDKWTPDNPEEDVGIGLKWD-----YGRYYASKSFYDPYKKRRIVWGWINETDTESDDLE 413
P P+ D GL Y + +F D R ++ +D
Sbjct: 215 ESDTGPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAY-NVQYADAPT 272
Query: 414 KGWASVQTIPR 424
GW IPR
Sbjct: 273 YGWGRSLAIPR 283
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 comprises sucrose-6-phosphate hydrolases, invertases, inulinases, levanases, eukaryotic fructosyltransferases, and bacterial fructanotransferases while GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), while GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Members of this clan are retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) that catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. Structures of all families in the two clans manifest a funnel-shaped active site that comprises two subsites with a single route for access by ligands. Length = 286 |
| >gnl|CDD|185720 cd08979, GH_J, Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Score = 79.0 bits (195), Expect = 2e-16
Identities = 68/278 (24%), Positives = 94/278 (33%), Gaps = 36/278 (12%)
Query: 140 KGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPD---QWYDINGVWTGSAT 196
G YHLFY P GN + A S+D W P A +P +D GVWT S
Sbjct: 13 VGKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVV 72
Query: 197 ILPDGQIVMLYTG--STDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLV-----PPRHI 249
PDG M YTG +VQ LA D L+ W K+ NPV P
Sbjct: 73 RDPDGTYRMFYTGYDRPKGAVQRIGLATSKD-----LIHWTKHGPNPVPRWYESGNPGPW 127
Query: 250 GPKDFRDPTTAWAGPDGKWRLTIGSK-IGKTGISLVYQTTDFKTYELLDEYLHAVPGTGM 308
+RDP G WR+ G++ + G + + D + + G
Sbjct: 128 DDHAWRDPAVVRDEEGGGWRMYYGARDADERGAIGLATSPDLIHWTPVPPPPGPRTGYDD 187
Query: 309 WECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPE 368
+ V I+G L S K Y +GT + P P
Sbjct: 188 GQLEVPQVVKIDGRWYLLYSGRNEDAK------------TGYRVGT-----ALFGPGRPL 230
Query: 369 EDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETD 406
D YA++ D ++ G++ D
Sbjct: 231 TLAE---LLDRTDLYAARPVPDGEGGGVVLEGFVQFGD 265
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. A common structural feature of all these enzymes is a 5-bladed beta-propeller domain, similar to GH43, that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. Length = 276 |
| >gnl|CDD|185736 cd08995, GH32_Aec43_like, Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Score = 76.9 bits (190), Expect = 1e-15
Identities = 63/293 (21%), Positives = 109/293 (37%), Gaps = 44/293 (15%)
Query: 136 PLFYKGWYHLFYQYNP--DSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDIN-GVWT 192
P + G +H+FY ++P W + DL+++ A+ D + + T
Sbjct: 5 PFYDDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGT 64
Query: 193 GSATILPDGQIVMLYTG--STDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIG 250
GS I +G YTG K QV A D L+ W K P ++
Sbjct: 65 GSV-IKGEGTYHAFYTGHNLDGKPKQVVMHATSDD-----LITWTKDPEFILIADGEGYE 118
Query: 251 PKDFRDPTTAWAGPDGKWRLTIGS-----KIGKTGISLVYQTTDFKTYELLDEYLHAVPG 305
D+RDP W +G + + + + + G ++ + D K +E +E +A
Sbjct: 119 KNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRGCIALFTSKDLKNWE-YEEPFYAPGL 177
Query: 306 TGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPD 365
M EC D + + +++ + + + HY + +P PD
Sbjct: 178 YFMPECPDLFKM--------------GDWWYLVYSEFSENRKTHYRVSK-SPFGPWRAPD 222
Query: 366 NPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWA 417
+ D GR +YA+K+ D RR ++GW+ DD W
Sbjct: 223 DDTFD---------GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWG 264
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. These enzymes are predicted to display a 5-fold beta-propeller fold as found for GH43 and CH68. The breakdown of sucrose is widely used as a carbon or energy source by bacteria, fungi, and plants. Invertase is used commercially in the confectionery industry, since fructose has a sweeter taste than sucrose and a lower tendency to crystallize. Length = 280 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 494 | |||
| KOG0228 | 571 | consensus Beta-fructofuranosidase (invertase) [Car | 100.0 | |
| COG1621 | 486 | SacC Beta-fructosidases (levanase/invertase) [Carb | 100.0 | |
| PF00251 | 308 | Glyco_hydro_32N: Glycosyl hydrolases family 32 N-t | 100.0 | |
| smart00640 | 437 | Glyco_32 Glycosyl hydrolases family 32. | 100.0 | |
| TIGR01322 | 445 | scrB_fam sucrose-6-phosphate hydrolase. | 100.0 | |
| cd08996 | 298 | GH32_B_Fructosidase Glycosyl hydrolase family 32, | 100.0 | |
| cd08995 | 280 | GH32_Aec43_like Glycosyl hydrolase family 32. This | 100.0 | |
| cd08979 | 276 | GH_J Glycosyl hydrolase families 32 and 68, which | 100.0 | |
| cd08772 | 286 | GH43_62_32_68 Glycosyl hydrolase families: GH43, G | 100.0 | |
| cd08997 | 349 | GH68 Glycosyl hydrolase family 68, includes levans | 99.95 | |
| cd08994 | 291 | GH43_like_2 Glycosyl hydrolase 43-like family cons | 99.9 | |
| cd08984 | 294 | GH43_5 Glycosyl hydrolase family 43. This glycosyl | 99.84 | |
| cd08993 | 268 | GH43_DUF377 Glycosyl hydrolase family 43 containin | 99.84 | |
| cd09004 | 275 | GH43_bXyl Glycosyl hydrolase family 43, includes m | 99.83 | |
| cd08999 | 287 | GH43_ABN_2 Glycosyl hydrolase family 43. This glyc | 99.76 | |
| cd08990 | 274 | GH43_AXH_like Glycosyl hydrolase family 43, includ | 99.72 | |
| cd08978 | 271 | GH_F Glycosyl hydrolase families 43 and 62 form CA | 99.67 | |
| cd08991 | 294 | GH43_bXyl_2 Glycosyl hydrolase family 43. This gly | 99.63 | |
| cd08998 | 288 | GH43_ABN_1 Glycosyl hydrolase family 43. This glyc | 99.57 | |
| cd08992 | 349 | GH43_like_1 Glycosyl hydrolase family 43, uncharac | 99.55 | |
| cd08984 | 294 | GH43_5 Glycosyl hydrolase family 43. This glycosyl | 99.54 | |
| PF11837 | 106 | DUF3357: Domain of unknown function (DUF3357); Int | 99.5 | |
| cd08985 | 265 | GH43_6 Glycosyl hydrolase family 43. This glycosyl | 99.48 | |
| cd08979 | 276 | GH_J Glycosyl hydrolase families 32 and 68, which | 99.4 | |
| PF04616 | 286 | Glyco_hydro_43: Glycosyl hydrolases family 43; Int | 99.39 | |
| cd09000 | 288 | GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xy | 99.37 | |
| cd09003 | 311 | GH43_AXH_1 Glycosyl hydrolase family 43. This glyc | 99.33 | |
| PF04041 | 312 | DUF377: Domain of unknown function (DUF377); Inter | 99.32 | |
| cd08983 | 276 | GH43_4 Glycosyl hydrolase family 43. This glycosyl | 99.31 | |
| cd08992 | 349 | GH43_like_1 Glycosyl hydrolase family 43, uncharac | 99.25 | |
| cd08981 | 291 | GH43_2 Glycosyl hydrolase family 43. This glycosyl | 99.21 | |
| cd08988 | 279 | GH43_ABN Glycosyl hydrolase family 43. This glycos | 99.15 | |
| cd08989 | 269 | GH43_XYL Glycosyl hydrolase family 43, beta-D-xylo | 99.05 | |
| cd08980 | 288 | GH43_1 Glycosyl hydrolase family 43. This glycosyl | 98.99 | |
| cd09001 | 269 | GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xy | 98.98 | |
| cd08986 | 269 | GH43_7 Glycosyl hydrolase family 43. This glycosyl | 98.91 | |
| cd08993 | 268 | GH43_DUF377 Glycosyl hydrolase family 43 containin | 98.89 | |
| PF02435 | 428 | Glyco_hydro_68: Levansucrase/Invertase; InterPro: | 98.84 | |
| cd08982 | 295 | GH43_3 Glycosyl hydrolase family 43. This glycosyl | 98.78 | |
| cd08995 | 280 | GH32_Aec43_like Glycosyl hydrolase family 32. This | 98.77 | |
| cd09002 | 280 | GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xy | 98.77 | |
| cd08994 | 291 | GH43_like_2 Glycosyl hydrolase 43-like family cons | 98.72 | |
| COG2152 | 314 | Predicted glycosylase [Carbohydrate transport and | 98.72 | |
| cd08987 | 303 | GH62 Glycosyl hydrolase family 62, characterized a | 98.71 | |
| cd08978 | 271 | GH_F Glycosyl hydrolase families 43 and 62 form CA | 98.64 | |
| cd08999 | 287 | GH43_ABN_2 Glycosyl hydrolase family 43. This glyc | 98.6 | |
| cd08772 | 286 | GH43_62_32_68 Glycosyl hydrolase families: GH43, G | 98.53 | |
| cd08991 | 294 | GH43_bXyl_2 Glycosyl hydrolase family 43. This gly | 98.47 | |
| cd08990 | 274 | GH43_AXH_like Glycosyl hydrolase family 43, includ | 98.44 | |
| cd08996 | 298 | GH32_B_Fructosidase Glycosyl hydrolase family 32, | 98.41 | |
| cd08998 | 288 | GH43_ABN_1 Glycosyl hydrolase family 43. This glyc | 98.34 | |
| cd08986 | 269 | GH43_7 Glycosyl hydrolase family 43. This glycosyl | 98.32 | |
| PF04041 | 312 | DUF377: Domain of unknown function (DUF377); Inter | 98.32 | |
| cd08983 | 276 | GH43_4 Glycosyl hydrolase family 43. This glycosyl | 98.3 | |
| PF04616 | 286 | Glyco_hydro_43: Glycosyl hydrolases family 43; Int | 98.2 | |
| TIGR01322 | 445 | scrB_fam sucrose-6-phosphate hydrolase. | 98.07 | |
| cd08981 | 291 | GH43_2 Glycosyl hydrolase family 43. This glycosyl | 98.05 | |
| cd08989 | 269 | GH43_XYL Glycosyl hydrolase family 43, beta-D-xylo | 98.01 | |
| cd09002 | 280 | GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xy | 97.93 | |
| cd08997 | 349 | GH68 Glycosyl hydrolase family 68, includes levans | 97.92 | |
| smart00640 | 437 | Glyco_32 Glycosyl hydrolases family 32. | 97.85 | |
| cd08988 | 279 | GH43_ABN Glycosyl hydrolase family 43. This glycos | 97.77 | |
| COG2152 | 314 | Predicted glycosylase [Carbohydrate transport and | 97.69 | |
| cd08980 | 288 | GH43_1 Glycosyl hydrolase family 43. This glycosyl | 97.69 | |
| cd09004 | 275 | GH43_bXyl Glycosyl hydrolase family 43, includes m | 97.68 | |
| cd09001 | 269 | GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xy | 97.54 | |
| cd08985 | 265 | GH43_6 Glycosyl hydrolase family 43. This glycosyl | 97.51 | |
| cd00260 | 351 | Sialidase Sialidases or neuraminidases function to | 97.45 | |
| cd09003 | 311 | GH43_AXH_1 Glycosyl hydrolase family 43. This glyc | 97.43 | |
| cd09000 | 288 | GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xy | 97.39 | |
| PF13088 | 275 | BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A | 97.32 | |
| COG3507 | 549 | XynB Beta-xylosidase [Carbohydrate transport and m | 97.31 | |
| PF03664 | 271 | Glyco_hydro_62: Glycosyl hydrolase family 62 ; Int | 97.26 | |
| cd08982 | 295 | GH43_3 Glycosyl hydrolase family 43. This glycosyl | 96.76 | |
| PF00251 | 308 | Glyco_hydro_32N: Glycosyl hydrolases family 32 N-t | 96.56 | |
| PF13088 | 275 | BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A | 96.47 | |
| cd08987 | 303 | GH62 Glycosyl hydrolase family 62, characterized a | 95.92 | |
| cd00260 | 351 | Sialidase Sialidases or neuraminidases function to | 93.3 | |
| PF13859 | 310 | BNR_3: BNR repeat-like domain; PDB: 3B69_A. | 93.15 | |
| COG3940 | 324 | Predicted beta-xylosidase [General function predic | 92.51 | |
| PF13810 | 316 | DUF4185: Domain of unknown function (DUF4185) | 85.34 | |
| PTZ00334 | 780 | trans-sialidase; Provisional | 84.83 |
| >KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-100 Score=789.72 Aligned_cols=372 Identities=51% Similarity=0.933 Sum_probs=356.0
Q ss_pred CCccccccccceeeeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCC
Q 011094 109 WTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDIN 188 (494)
Q Consensus 109 ~~~~~~~w~Rp~~Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~ 188 (494)
+++...+++||.|||||++|||||| +|++|+|||||||||++++||+++||||||+|||||+.+|+||.|++++|.+
T Consensus 41 ~~~~~n~~~Rp~~HFqP~k~wMN~P---~~ykG~yHLFyQyNP~gavwg~ivWGHavSkDLinW~~lp~Ai~Ps~~~din 117 (571)
T KOG0228|consen 41 PSNTVNQPDRPGFHFQPPKGWMNDP---MYYKGKYHLFYQYNPKGAVWGNIVWGHAVSKDLINWEALPPAIAPSEWFDIN 117 (571)
T ss_pred ccccccccCCceeecCCCcccccCc---cccCcEEEEEEecCCCCceeeeeEeeeecchhhccccccCcccCCCCccccC
Confidence 5677788999999999999999988 8999999999999999999999999999999999999999999999999999
Q ss_pred cEEeeeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCC--CCCCCCCCCCCeeEeecCCC
Q 011094 189 GVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP--RHIGPKDFRDPTTAWAGPDG 266 (494)
Q Consensus 189 Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p--~g~~~~~fRDP~V~w~~~dg 266 (494)
|||||||+++++|+.++||||...+..|+|++|++.|.+||.|+.|+|.++||++.++ .+++...||||+++|.+++|
T Consensus 118 g~wSGSati~~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~k~~gnp~~~p~~V~~in~s~FRDPttaW~~~dg 197 (571)
T KOG0228|consen 118 GCWSGSATIDPNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWSKDGGNPFMKPDKVLGINSSQFRDPTTAWFGQDG 197 (571)
T ss_pred ccccceEEEccCCCeEEEecccCcCceEEEEEeccCCCCchhhheeecCCCceeeccccccCCChhhccCCceeeecCCC
Confidence 9999999999999999999999988899999999999999999999999999999988 78888999999999999999
Q ss_pred eEEEEEeeecCCeeEEEEEEeCCCCCCEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCCc
Q 011094 267 KWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTK 346 (494)
Q Consensus 267 ~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~~ 346 (494)
+|+|++|++.+++|.+++|+|+||++|+....++|....+|||||||||||..++.++++++..|+..|||+++|+++++
T Consensus 198 kWrm~vgsk~~q~g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmwECPdffpVs~tg~~g~d~s~~~~~nkhvlkasl~gt~ 277 (571)
T KOG0228|consen 198 KWRMTVGSKIKQRGKAIIYSSDDFKHWTKSSVPLHSGDLTGMWECPDFFPVSITGTDGLDWSLFGSINKHVLKASLGGTS 277 (571)
T ss_pred cEEEEEEeecCccceEEEEeccchhhhhcccccccccCccceEECCCcEEecccCCCCceEEEeccccccccccccCCce
Confidence 99999999988899999999999999999999999888899999999999999999999999988888999999999999
Q ss_pred eeEEEEEEecCCCCcccCCCCCcccccceeeecCCCcccceeecCCCCcEEEEEEccCCCCCCCCcCCCCccCCcccEEE
Q 011094 347 VDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTV 426 (494)
Q Consensus 347 ~~~Y~iG~~d~~~~~f~p~~~~~d~g~~~rlD~G~fYA~qtf~d~~~~Rril~GW~~~~d~~~~~~~~gWag~lslPR~l 426 (494)
.++|+||+||+++.+|+|++...++..++|+|||+|||+|||+|..++|||+|||++|+++..++.++||+|+|+|||++
T Consensus 278 ~d~Y~IG~yd~~~~~fvpd~~~~~~~~dlr~Dyg~~YASkTFfds~~~rrIlwgWa~es~~~~dd~~kgw~g~qtipRki 357 (571)
T KOG0228|consen 278 NDQYFIGTYDGEKDTFVPDDGFSRVSVDLRYDYGKYYASKTFFDSVKGRRILWGWASESDYTNDDPTKGWRGLQTIPRKI 357 (571)
T ss_pred eEEEEEecccCCcceeeccCCcccccccccccchhhhhhhhhccccCCcEEEEEecccCcccccchhcccccccccceEE
Confidence 99999999999999999999988887789999999999999999999999999999999999999999999999999999
Q ss_pred EEeeCCCceEEEcchHHHHhhhhcCeeeeeEEEcCCceEEeecCceeEEEEEEEEEE
Q 011094 427 LYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQVILHTISLK 483 (494)
Q Consensus 427 ~l~~~~g~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~~~~~qldi~~~~~~ 483 (494)
+|++..|..|.||||+|+|.||.......+..+++|+++++...++.|.|+|++|+-
T Consensus 358 ~Ld~~s~k~l~qwpv~eie~Lr~~~v~~~~~~~~~g~~~~v~~~t~~q~dvev~f~~ 414 (571)
T KOG0228|consen 358 WLDTESGKQLTQWPVEEIEPLRLSNVKMDNKLFKPGSLNEVSGITAAQADVEVTFEV 414 (571)
T ss_pred EeeccCCCcccccchheeecccccccCccccccCCceeEEecccccccccceEEEEe
Confidence 999877889999999999999999888788899999999999999999999998863
|
|
| >COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-83 Score=681.73 Aligned_cols=334 Identities=35% Similarity=0.695 Sum_probs=283.7
Q ss_pred cccceeeeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeE
Q 011094 116 WQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSA 195 (494)
Q Consensus 116 w~Rp~~Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSa 195 (494)
-+||.|||+|+.||||||||++|++|+|||||||||.++.||+++||||+|+|||||+++|+||.|+.+||.+|||||||
T Consensus 27 ~~Rp~yHftP~~G~mNDPNG~iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~piaL~Pd~~~d~~g~ySGSA 106 (486)
T COG1621 27 PYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDLVHWEHLPIALAPDDDYDSHGCYSGSA 106 (486)
T ss_pred CCCceeeecCCcCceECCCceeEECCEEEEEEecCCCCCCCCCceeeeeccCCcccceECCceecCCCccccCCceeeeE
Confidence 34999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCeEEEEEeccCC----CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEE
Q 011094 196 TILPDGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLT 271 (494)
Q Consensus 196 vv~~dG~~~~~YTG~~~----~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~Mv 271 (494)
|+ .+|++.+||||+.. .+.+.||+|+|+|+ .+|+|+.+|||+..|.++ +.+||||+|+|+ ++|+|||+
T Consensus 107 V~-~~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg-----~~f~K~~~~~i~~~p~~~-t~hFRDPKv~w~-~~~~~~~m 178 (486)
T COG1621 107 VV-DDGNLSLFYTGNVRDSNGIRQQTQCIAYSEDG-----GTFEKYSGNPIIDQPEGY-TPHFRDPKVVWD-EGGKWWMM 178 (486)
T ss_pred EE-eCCcEEEEEccceeccCCcceeEEEEEEEcCC-----CceEeccCCceecCCCcc-cccCCCCccccc-CCCcEEEE
Confidence 86 68999999999974 25689999999995 789998789999988886 789999998796 78999999
Q ss_pred Eeee-cCCeeEEEEEEeCCCCCCEEcCcccccCCCC-CceEeccEEEecccCccccccccCCCCeEEEEEeeeCC-----
Q 011094 272 IGSK-IGKTGISLVYQTTDFKTYELLDEYLHAVPGT-GMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD----- 344 (494)
Q Consensus 272 iGa~-~~~~G~v~lY~S~Dl~~W~~~~~ll~~~~~~-gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~----- 344 (494)
+||+ .+..|.|++|+|.||++|++.+++..+..+. +||||||||+|++. ..+.+|+ +..+.++
T Consensus 179 lgAq~~~~~g~i~lY~S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~~~--~~~~~~p--------qg~~~~~~~~~n 248 (486)
T COG1621 179 LGAQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELDGE--DVLLFWP--------QGLSINGGEYDN 248 (486)
T ss_pred EEEecCCCCceEEEEeCCCccCcEEEEeeccCCCceeeEEECCCeEEecCc--CceEEcc--------eeeecCCCcCCC
Confidence 9998 4668999999999999999999998763333 49999999999854 3444444 4344332
Q ss_pred CceeEEEEEEecCCCCcccCCCCCcccccceeeecC-CCcccceeecCCCCcEEEEEEccCCCCC--CCCcCCCCccCCc
Q 011094 345 TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTE--SDDLEKGWASVQT 421 (494)
Q Consensus 345 ~~~~~Y~iG~~d~~~~~f~p~~~~~d~g~~~rlD~G-~fYA~qtf~d~~~~Rril~GW~~~~d~~--~~~~~~gWag~ls 421 (494)
.....|++|.||++ +|..... -..++|+| +|||+|||.++ ++|||++|||++|+.. .++...||+||||
T Consensus 249 ~~~~~Y~vG~~dg~--~f~~~~~-----~~~~LD~G~DfYApQtf~~~-dgrri~igWmg~w~~~~~~PT~~~~w~~~mT 320 (486)
T COG1621 249 IYQSGYFVGDFDGK--EFKLDDG-----QFRELDFGFDFYAPQTFLDP-DGRRILIGWMGNWDYTNNYPTIDEGWRGAMT 320 (486)
T ss_pred cceeEEEEEeeccc--eeEecCC-----CceecccCccccceeeccCC-CCCEEEEEeccCccccCCCCccccCcCccce
Confidence 22467999999987 4544332 13579999 89999999996 7999999999999986 6777789999999
Q ss_pred ccEEEEEeeCCCceEEEcchHHHHhhhhcCeeeeeEEEcCCceEEeecCceeEEEEE
Q 011094 422 IPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQVILH 478 (494)
Q Consensus 422 lPR~l~l~~~~g~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~~~~~qldi~ 478 (494)
|||||+|. +| +|+|+||+||++||..+..+.++.++..+.+++..+.+.++++.
T Consensus 321 lpRel~l~--~~-~L~Q~Pi~~l~~lr~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~ 374 (486)
T COG1621 321 LPRELTLE--DG-KLYQTPVRELESLRKPEEAAHNTTLSGNSKLELPSGDAYELDLD 374 (486)
T ss_pred eeEEEEEc--CC-eEEecchHHHHhhhcccccccccccccceeeeccCCccEEEEEE
Confidence 99999995 34 89999999999999997778888887765455555555555444
|
|
| >PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-78 Score=617.31 Aligned_cols=299 Identities=42% Similarity=0.850 Sum_probs=249.7
Q ss_pred eeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCC
Q 011094 122 HFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDG 201 (494)
Q Consensus 122 Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG 201 (494)
||+|++||||||||++|++|+|||||||||.++.||+++||||+|+|||||+++|+||.|+.++|++|||||||+++ ++
T Consensus 1 H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~d~~g~~SGs~~~~-~~ 79 (308)
T PF00251_consen 1 HFTPPKGWMNDPNGLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKDLVHWEHLPVALPPDEEYDADGCFSGSAVVD-DD 79 (308)
T ss_dssp SBB-SSEEEEEEEEEEEETTEEEEEEEEETTSSSS-SBEEEEEEESSSSSEEEEEEEE-SSSGGGTTEEEEEEEEEE-TT
T ss_pred CCCCCCCCeECCccCeEeCCEEEEEeccCCCCcccceeEEEEEECCCCCCceeCCceEcccccCCcCccCcceEEEE-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999875 55
Q ss_pred eEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcC-CCceecC-CCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCe
Q 011094 202 QIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYP-GNPVLVP-PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT 279 (494)
Q Consensus 202 ~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~-~nPVi~~-p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~ 279 (494)
+++|||||+..+..|.|++|+|.|.+ ++|+|++ +||||.. |++ ...+||||+|+|. ++|+|+|++|++....
T Consensus 80 ~~~~~YTg~~~~~~~~q~~A~s~d~~----~~w~k~~~~~pvi~~~p~~-~~~~~RDP~v~~~-~~~~~~m~~g~~~~~~ 153 (308)
T PF00251_consen 80 NLVLFYTGNNRDGKQVQCLAYSTDDG----ITWTKYPQGNPVIPEPPPG-DTTDFRDPKVFWR-EDGRWYMLLGAGRDGR 153 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEESSTT----SSEEE-TTTCESBESSSTT-SCTSEEEEEEEEE-CTTEEEEEEEEEETTE
T ss_pred EEEEEEeccCCCCCeEEEEEEECCCC----CceEEcCCCCcEEEecccC-CCCccccCeEEEe-cCCEEEEEEeccccCc
Confidence 89999999987668999999996653 8999998 4999996 444 7789999999887 4699999999987788
Q ss_pred eEEEEEEeCCCCCCEEcCcccccCC-CCCceEeccEEEecccCccccccccCCCCeEEEEEeee----CCCceeEEEEEE
Q 011094 280 GISLVYQTTDFKTYELLDEYLHAVP-GTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASL----DDTKVDHYAIGT 354 (494)
Q Consensus 280 G~v~lY~S~Dl~~W~~~~~ll~~~~-~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~----~~~~~~~Y~iG~ 354 (494)
|++++|+|+||++|++.+.+..... ..+||||||||+|++.+. .+...+|||.+|. .....++|+||+
T Consensus 154 g~i~~y~S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~-------~~~~~~~vl~~s~~g~~~~~~~~~Y~vG~ 226 (308)
T PF00251_consen 154 GCILLYTSDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGD-------GTGKWVWVLIFSPQGIEDNGHGTYYMVGD 226 (308)
T ss_dssp EEEEEEEESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTS-------SSEEEEEEEEEEEESTTTTTTEEEEEEEE
T ss_pred ceEEEEEcCCcccCceeCcccccccccccccccceEEEECCccc-------ccceEEEEEEecccccccccccceEEeEE
Confidence 9999999999999999999876433 356999999999987511 0123568999998 455678999999
Q ss_pred ecCCCCcccCCCCCcccccceeeecC-CCcccceeecCCCCcEEEEEEccCCCCCCC-CcCCCCccCCcccEEEEEeeCC
Q 011094 355 YNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESD-DLEKGWASVQTIPRTVLYDNKT 432 (494)
Q Consensus 355 ~d~~~~~f~p~~~~~d~g~~~rlD~G-~fYA~qtf~d~~~~Rril~GW~~~~d~~~~-~~~~gWag~lslPR~l~l~~~~ 432 (494)
||..+++|+++.. ...++|+| +|||+|+|.++.++||||||||++++.... ....||+|+|||||+|.|++ +
T Consensus 227 ~d~~~~~f~~~~~-----~~~~lD~G~dfYA~qtf~~~~~~r~i~~gW~~~~~~~~~~~~~~gW~g~lslPR~l~l~~-~ 300 (308)
T PF00251_consen 227 FDFDGGTFTPDDS-----SFQRLDYGFDFYAPQTFYDPDGGRRILIGWMGEWDYNADDYPTYGWAGCLSLPRELTLKD-E 300 (308)
T ss_dssp EETTTTEEEESST-----TSEESBSSSS-EEEEEEEETTTTEEEEEEEES-TTTHHHHCHGHTEE-EE---EEEEEET-T
T ss_pred ecCCCCeeeeecc-----ccceeccCccccCCchhcCCCcCcEEEEEEecCCCcccccCCCCCCccEEEeCEEEEEEE-C
Confidence 9877889987621 25789999 599999999986569999999999886532 23699999999999999975 4
Q ss_pred CceEEEcc
Q 011094 433 GSNVVQWP 440 (494)
Q Consensus 433 g~~L~q~P 440 (494)
+.+|+|+|
T Consensus 301 ~~~L~q~P 308 (308)
T PF00251_consen 301 GGRLYQKP 308 (308)
T ss_dssp SSSEEEEE
T ss_pred CCeEEEcC
Confidence 55899998
|
; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A .... |
| >smart00640 Glyco_32 Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-77 Score=631.80 Aligned_cols=339 Identities=50% Similarity=0.946 Sum_probs=272.8
Q ss_pred eeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCC
Q 011094 122 HFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDG 201 (494)
Q Consensus 122 Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG 201 (494)
||+|+.||||||||++|++|+|||||||+|.++.||+++||||+|+|||||+++|+||.|+.+||.+|||||||++ .+|
T Consensus 1 H~~p~~gw~NDPnGl~~~~G~yHlFyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~aL~P~~~~d~~g~~sGsav~-~~~ 79 (437)
T smart00640 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGPVWGNIHWGHAVSKDLVHWTHLPVALAPDEWYDSNGVFSGSAVI-DPG 79 (437)
T ss_pred CCCCCcCccCCCCeeeEECCEEEEEEecCCCCCCCCCeEEEEEEcCCcceeeecCcccCCCCcCCCCcEEEEEEEE-CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999986 567
Q ss_pred eEEEEEeccCCC------ccceE-EEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEee
Q 011094 202 QIVMLYTGSTDK------SVQVQ-NLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (494)
Q Consensus 202 ~~~~~YTG~~~~------~~q~q-~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa 274 (494)
+++|||||+... ..+.| +.|.++| +++|+|+++|||+.++++....+||||+|+|. ++|+|||++|+
T Consensus 80 ~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d-----~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~-~~~~~~m~~g~ 153 (437)
T smart00640 80 NLSLLYTGNVAIDTNVQVQRQAQQLAASDDL-----GGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWY-DGDKWYMVIGA 153 (437)
T ss_pred ceEEEEcCCcccccccCcccEEEEEEEECCC-----CCeeEECCCCcEEeCCCCCCCCCcCCCCccEE-CCCEEEEEEEE
Confidence 799999998421 12333 4555555 38999998899999877666789999999775 44799999998
Q ss_pred e-cCCeeEEEEEEeCCCCCCEEcCccccc-CCCC-CceEeccEEEecccCccccccccCCCCeEEEEEeeeCCCceeEEE
Q 011094 275 K-IGKTGISLVYQTTDFKTYELLDEYLHA-VPGT-GMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYA 351 (494)
Q Consensus 275 ~-~~~~G~v~lY~S~Dl~~W~~~~~ll~~-~~~~-gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~~~~~Y~ 351 (494)
+ .++.|++++|+|+||++|++.+.++.. .... +||||||||+|++++ ...||||.+|..+....+|.
T Consensus 154 ~~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~----------~~~~~vLi~s~~g~~~~~y~ 223 (437)
T smart00640 154 SDEDKTGIALLYRSTDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDG----------DTSKHVLKVSPQGGSGNYYF 223 (437)
T ss_pred EecCCCeEEEEEECCCcccCeECCcccccCCCCccceEECCcEEEeCCCC----------CceeEEEEECcCCCCccEEE
Confidence 6 456799999999999999999998754 1223 699999999997543 23699999998876678999
Q ss_pred EEEecCCCCcccCCCCCcccccceeeecC-CCcccceeecCCCCcEEEEEEccCCCCCC-CCcCCCCccCCcccEEEEEe
Q 011094 352 IGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTES-DDLEKGWASVQTIPRTVLYD 429 (494)
Q Consensus 352 iG~~d~~~~~f~p~~~~~d~g~~~rlD~G-~fYA~qtf~d~~~~Rril~GW~~~~d~~~-~~~~~gWag~lslPR~l~l~ 429 (494)
+|.|+++ .+|+|+... +...+.++|+| +|||+|||.+++.+||||||||++++... .....||+|+|||||+|.|+
T Consensus 224 ~G~~~g~-~~f~~~~~~-~~~~~~~lD~G~dfYA~qt~~~~~~~r~i~~gW~~~~~~~~~~~p~~~W~g~~tlPRel~l~ 301 (437)
T smart00640 224 VGYFDGS-DQFTPDDPE-DVGIGLRLDYGFDFYASQTFYDPDGNRRILIGWMGEWDSYADDVPTKGWAGALSLPRELTLD 301 (437)
T ss_pred EEEEcCc-eeEeECCcc-ccCccceEecCCCceeeeeeecCCCCcEEEEEecCCCccccccCCCCCccccceeCeEEEEE
Confidence 9999863 479887653 22334589999 89999999997556999999999987422 22238999999999999997
Q ss_pred eCCCceEEEcchHHHHhhhhcCeeeeeEEEcCCceEEeec--CceeEEEEEEEE
Q 011094 430 NKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDI--GVATQVILHTIS 481 (494)
Q Consensus 430 ~~~g~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~--~~~~qldi~~~~ 481 (494)
.++| +|+|+||+||++||.. .....+++.++....+.. ..+.+++|+|++
T Consensus 302 ~~~g-~L~~~Pv~el~~lr~~-~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~ 353 (437)
T smart00640 302 KTGG-KLLQWPVEELESLRNV-KELSNLTLKPGSVNELLGLTASGDAYEIELSF 353 (437)
T ss_pred ecCC-EEEEeecHHHHhhhCc-ccccceeecCCceeeeecccCCccEEEEEEEE
Confidence 5455 7999999999999954 334445555443322221 234456666654
|
|
| >TIGR01322 scrB_fam sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-77 Score=634.38 Aligned_cols=302 Identities=33% Similarity=0.643 Sum_probs=259.4
Q ss_pred ccceeeeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEE
Q 011094 117 QRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSAT 196 (494)
Q Consensus 117 ~Rp~~Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSav 196 (494)
+||+|||+|+.||||||||++|++|+||||||++|.++.||+++||||+|+|||||+++|+||.|+..||..|||||||+
T Consensus 13 ~rp~~H~~p~~gw~nDPng~~~~~G~yHlfyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G~~sGsav 92 (445)
T TIGR01322 13 WRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDEGVALAPDDPYDSHGCYSGSAV 92 (445)
T ss_pred cCccCccCCCcCCccCCCcceEECCEEEEEEccCCCCCccCceEEEEEECCCccccEECCccCcCCCcccCCceEECeEE
Confidence 49999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EccCCeEEEEEeccCC----CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEE
Q 011094 197 ILPDGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTI 272 (494)
Q Consensus 197 v~~dG~~~~~YTG~~~----~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~Mvi 272 (494)
+ .+|+++|||||+.. ...+.||+|+|.|+ .+|+|+. +|||.++++....+||||+| |. .+|+|+|++
T Consensus 93 ~-~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg-----~~~~k~~-~pvi~~~~~~~~~~fRDP~V-~~-~~g~~~M~~ 163 (445)
T TIGR01322 93 D-NNGQLTLMYTGNVRDSDWNRESYQCLATMDDD-----GHFEKFG-IVVIELPPAGYTAHFRDPKV-WK-HNGHWYMVI 163 (445)
T ss_pred e-eCCEEEEEEeccccCCCCCeeEEEEEEEcCCC-----CeEEECC-CceEeCCCCCCcCcCCCCcE-Ee-ECCEEEEEE
Confidence 6 78999999999752 23578999999985 6999984 59998755544678999999 54 478999999
Q ss_pred eeec-CCeeEEEEEEeCCCCCCEEcCcccccC----CCC-CceEeccEEEecccCccccccccCCCCeEEEEEeeeCCC-
Q 011094 273 GSKI-GKTGISLVYQTTDFKTYELLDEYLHAV----PGT-GMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT- 345 (494)
Q Consensus 273 Ga~~-~~~G~v~lY~S~Dl~~W~~~~~ll~~~----~~~-gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~- 345 (494)
|++. +..|++++|+|+||++|++.+.+.... ... .||||||||+|++ ||||.+|..+.
T Consensus 164 g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~~---------------k~vL~~s~~g~~ 228 (445)
T TIGR01322 164 GAQTETEKGSILLYRSKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLDG---------------QDVLLFSPQGLD 228 (445)
T ss_pred EEecCCCceEEEEEECCCcccCeEecccccccccccCCccceEECCeEEEECC---------------cEEEEEeccccC
Confidence 9874 456899999999999999999887542 222 4999999999962 45555553321
Q ss_pred ---------ceeEEEEEEecCCCCcccCCCCCcccccceeeecC-CCcccceeecCCCCcEEEEEEccCCCCCCCCcCCC
Q 011094 346 ---------KVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKG 415 (494)
Q Consensus 346 ---------~~~~Y~iG~~d~~~~~f~p~~~~~d~g~~~rlD~G-~fYA~qtf~d~~~~Rril~GW~~~~d~~~~~~~~g 415 (494)
....|++|+||..+.+|++++. ...+|+| +|||+|||.++ ++||||||||++++...++.+.|
T Consensus 229 ~~~~~~~~~~~~~Y~vG~~d~~~~~f~~~~~------~~~lD~G~dfYA~qtf~~~-~gr~i~~gW~~~~~~~~~~~~~~ 301 (445)
T TIGR01322 229 ASGYDYQNIYQNGYIVGQLDYEAPEFTHGTE------FHELDYGFDFYAPQTFLAP-DGRRILVAWMGLPEIDYPTDRDG 301 (445)
T ss_pred cccccccccccceeEEEEEECCCCEEecCCC------CceeccCcCceeeeeEECC-CCCEEEEEeCCCCccCCCCccCC
Confidence 1356999999988889987643 2479999 89999999986 69999999999998777777899
Q ss_pred CccCCcccEEEEEeeCCCceEEEcchHHHHhhhhcCe
Q 011094 416 WASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNST 452 (494)
Q Consensus 416 Wag~lslPR~l~l~~~~g~~L~q~Pv~Ele~LR~~~~ 452 (494)
|+|+|||||+|.|+ +| +|+|+||+||++||.+..
T Consensus 302 W~g~lslpR~l~l~--~g-~L~~~Pv~el~~lr~~~~ 335 (445)
T TIGR01322 302 WAHCMTLPRELTLK--DG-KLVQTPLRELKALRTEEH 335 (445)
T ss_pred cccccccCEEEEEe--CC-eEEEEEhHHHHHHhcCcc
Confidence 99999999999996 45 899999999999998654
|
|
| >cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-68 Score=536.77 Aligned_cols=286 Identities=42% Similarity=0.797 Sum_probs=243.2
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEE
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLY 207 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~Y 207 (494)
||||||||++|++|+||||||++|.++.|++++||||+|+|||||+++++||.|+..+|..|||||||+++.+|+++|||
T Consensus 1 gw~nDPng~~~~~G~yhlfyq~~p~~~~~~~~~wgha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGsav~~~~g~~~~~Y 80 (298)
T cd08996 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDSGGCFSGSAVVDDNGKLVLFY 80 (298)
T ss_pred CCcccCCeeeEECCEEEEEEcCCCCCCCCCCcEEEEEEecCccceeECCcccCCCCcccCCeEEeCeEEEcCCCcEEEEE
Confidence 89999999999999999999999999999999999999999999999999999988899999999999876559999999
Q ss_pred eccCC---CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-CCeeEEE
Q 011094 208 TGSTD---KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISL 283 (494)
Q Consensus 208 TG~~~---~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-~~~G~v~ 283 (494)
||... ...+.|++|+|+|. +++|+|...+|++.+ +.....+||||+|+|. +|+|+|++|++. +..|++.
T Consensus 81 Tg~~~~~~~~~~~~~lA~S~dd----g~~w~k~~~~~~~~~-~~~~~~~~RDP~V~~~--~g~~~m~~g~~~~~~~~~i~ 153 (298)
T cd08996 81 TGNVKLDGGRRQTQCLAYSTDD----GRTFTKYEGNPVIPP-PDGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRIL 153 (298)
T ss_pred eceeCCCCCceEEEEEEEEcCC----CCEEEECCCCceEcC-CCCCCCcccCCeEEeE--CCEEEEEEEEEecCCCcEEE
Confidence 99864 45789999999853 389999988998863 3345679999999653 499999999874 4568999
Q ss_pred EEEeCCCCCCEEcCccc-ccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCC------ceeEEEEEEec
Q 011094 284 VYQTTDFKTYELLDEYL-HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT------KVDHYAIGTYN 356 (494)
Q Consensus 284 lY~S~Dl~~W~~~~~ll-~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~------~~~~Y~iG~~d 356 (494)
+|+|+||++|++.+.+. ......+|||||+||+++. ..||||.+|.... ...+|++|+||
T Consensus 154 ly~S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~-------------~~k~vL~~s~~~~~~~~~~~~~~y~~G~~~ 220 (298)
T cd08996 154 LYRSDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDV-------------EGKWVLIFSPQGLEPEGNGSGTGYLVGDFD 220 (298)
T ss_pred EEECCCCCCCEEcceecccCCCccceEeCCcEEEECC-------------CCeEEEEECCCCCCCCCCccceEEEEEEEE
Confidence 99999999999998874 2222345999999999973 1378888887643 35689999999
Q ss_pred CCCCcccCCCCCcccccceeeecC-CCcccceeecCCCCcEEEEEEccCCCCCCCCcCCCCccCCcccEEEEEeeCCCce
Q 011094 357 PANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGSN 435 (494)
Q Consensus 357 ~~~~~f~p~~~~~d~g~~~rlD~G-~fYA~qtf~d~~~~Rril~GW~~~~d~~~~~~~~gWag~lslPR~l~l~~~~g~~ 435 (494)
.. +|+++. ....++|+| +|||+|+|.++ ++||||||||++++...+....||+|+|||||+|.|++ ++ +
T Consensus 221 ~~--~~~~~~-----~~~~~lD~G~dfYA~q~~~~~-~~r~i~~gW~~~~~~~~~~~~~~w~g~ls~pr~l~l~~-~~-~ 290 (298)
T cd08996 221 GT--TFTFDH-----TEFGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGWAGCLTLPRELSLKD-GG-R 290 (298)
T ss_pred CC--CCeEec-----CCceEecCCCCeEeCceeeCC-CCCEEEEEEecCCCcCCCCCCCCceeeeEeCEEEEEcc-CC-E
Confidence 76 455431 124689999 89999999997 79999999999998877788999999999999999985 33 8
Q ss_pred EEEcchHH
Q 011094 436 VVQWPVEE 443 (494)
Q Consensus 436 L~q~Pv~E 443 (494)
|.|+||+|
T Consensus 291 l~~~P~~e 298 (298)
T cd08996 291 LYQRPVRE 298 (298)
T ss_pred EEEEeCCC
Confidence 99999986
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal |
| >cd08995 GH32_Aec43_like Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-55 Score=439.13 Aligned_cols=266 Identities=23% Similarity=0.419 Sum_probs=219.5
Q ss_pred cCCccceEECCEEEEEEeeCCCCCCC--CCcEEEEEEecCccCeeecceeccC-CCCcCCCcEEeeeEEEccCCeEEEEE
Q 011094 131 NDPNGPLFYKGWYHLFYQYNPDSAVW--GNITWGHAVSADLIHWLYLPIAMVP-DQWYDINGVWTGSATILPDGQIVMLY 207 (494)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~w--g~~~WGHA~S~DLvhW~~~p~AL~P-d~~~D~~Gv~SGSavv~~dG~~~~~Y 207 (494)
.||. ++|++|+||||||++|.+..| ++++||||+|+||+||+++++||.| +..+|..|||+|||++ .+|+++|||
T Consensus 1 ~d~~-~~~~~G~yhlfyq~~p~~~~~~~~~~~wgha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs~~~-~~g~~~l~Y 78 (280)
T cd08995 1 GDPM-PFYDDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSVIK-GEGTYHAFY 78 (280)
T ss_pred CCcc-ceEECCEEEEEEEcCCCCCCcccCCceEEEEEccCcCccEECcceecCCCCcccccCceEeEEEe-eCCEEEEEE
Confidence 4886 999999999999999999888 8999999999999999999999988 4567889999999986 679999999
Q ss_pred eccCCC--ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-----CCee
Q 011094 208 TGSTDK--SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----GKTG 280 (494)
Q Consensus 208 TG~~~~--~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-----~~~G 280 (494)
||+... ..+.|++|+|+|+ ++|+|.+.+||+.+++++...+||||+|+|.+.+|+|+|++|++. +..|
T Consensus 79 Tg~~~~~~~~~~i~~A~S~D~-----~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~g 153 (280)
T cd08995 79 TGHNLDGKPKQVVMHATSDDL-----ITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRG 153 (280)
T ss_pred EEECCCCCCcEEEEEEECCCC-----CccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCCe
Confidence 998642 4678999999885 899999888998755566667899999966544799999999874 4578
Q ss_pred EEEEEEeCCCCCCEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCC-CceeEEEEEEecCCC
Q 011094 281 ISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD-TKVDHYAIGTYNPAN 359 (494)
Q Consensus 281 ~v~lY~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~-~~~~~Y~iG~~d~~~ 359 (494)
++.+|+|+||++|++.+.+... ....|||||++|+++ .||||..|... .....|++|+. . .
T Consensus 154 ~i~~~~S~Dl~~W~~~~~~~~~-~~~~~~E~P~l~~~~---------------g~~~L~~s~~~~~~~~~Y~~~~~-~-~ 215 (280)
T cd08995 154 CIALFTSKDLKNWEYEEPFYAP-GLYFMPECPDLFKMG---------------DWWYLVYSEFSENRKTHYRVSKS-P-F 215 (280)
T ss_pred EEEEEEeCCcCcceecCceecC-CCcceeecceEEEEC---------------CEEEEEEEeccCCCcEEEEEeCC-C-C
Confidence 9999999999999999876543 234599999999996 27888888753 34567999962 2 3
Q ss_pred CcccCCCCCcccccceeeecC-CCcccceeecCCCCcEEEEEEccCCCCCCCCcCCCCccCCcccEEEEEeeCCC
Q 011094 360 DKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTG 433 (494)
Q Consensus 360 ~~f~p~~~~~d~g~~~rlD~G-~fYA~qtf~d~~~~Rril~GW~~~~d~~~~~~~~gWag~lslPR~l~l~~~~g 433 (494)
+.|..... ..+| | +|||+|||.|+ +||||||||++++.+.++.++||+|+|| ||+|.+.+ +|
T Consensus 216 g~~~~~~~-------~~~d-g~dfYA~~~~~~~--~r~i~~gw~~~~~~~~~~~~~~w~~~l~-~~~~~~~~-~g 278 (280)
T cd08995 216 GPWRAPDD-------DTFD-GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGGNLV-VHELIQNE-DG 278 (280)
T ss_pred CCeEcCCc-------CccC-cccccceeEEEeC--CeEEEEEEecCCCCcccccCCccceEEE-eeEEEECC-CC
Confidence 45642211 1378 6 89999999996 8999999999999888888999999999 67777763 56
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a |
| >cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=314.63 Aligned_cols=242 Identities=26% Similarity=0.322 Sum_probs=189.6
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCC-cEEEEEEecCccCeeecceec--cCCCCcCCCcEEeeeEEEccCCeEEEEEe
Q 011094 132 DPNGPLFYKGWYHLFYQYNPDSAVWGN-ITWGHAVSADLIHWLYLPIAM--VPDQWYDINGVWTGSATILPDGQIVMLYT 208 (494)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wg~-~~WGHA~S~DLvhW~~~p~AL--~Pd~~~D~~Gv~SGSavv~~dG~~~~~YT 208 (494)
||+++. |+||||||++|.+..++. ..||||+|+||+||++.+.+| .+...+|..+||+|+++...||+++||||
T Consensus 8 ~~~~~~---g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~v~~~~dg~~~~~Yt 84 (276)
T cd08979 8 NPAVVV---GKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFYT 84 (276)
T ss_pred CCceEe---eeEEEEEEccCcCcCCCCcceeEEEEcCCCCccEECCcCccCCCCCchhcCCeEcceEEEcCCCeEEEEEe
Confidence 565444 889999999999876554 568999999999999999887 56667899999999998765599999999
Q ss_pred ccCC--CccceEEEEEEcCCCCCCcceEEEcCCCcee-----cCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-CCee
Q 011094 209 GSTD--KSVQVQNLAYPADPSDPLLLDWVKYPGNPVL-----VPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTG 280 (494)
Q Consensus 209 G~~~--~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi-----~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-~~~G 280 (494)
|... ...+.|++|+|+|+ ++|+|.+.+|++ ..+......++|||+|++.+.+|+|+|++++.. +..+
T Consensus 85 ~~~~~~~~~~~i~~A~S~D~-----~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~~ 159 (276)
T cd08979 85 GYDRPKGAVQRIGLATSKDL-----IHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADERG 159 (276)
T ss_pred cccCCCCCcceEEEEECCCC-----CceEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCCc
Confidence 9863 45688999999985 899998777754 222233456899999965433499999999864 3457
Q ss_pred EEEEEEeCCCCCCEEcCccc--ccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCC-CceeEEEEEEecC
Q 011094 281 ISLVYQTTDFKTYELLDEYL--HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD-TKVDHYAIGTYNP 357 (494)
Q Consensus 281 ~v~lY~S~Dl~~W~~~~~ll--~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~-~~~~~Y~iG~~d~ 357 (494)
++.+|+|+|+++|++.+.+. .......++|||++|+++ .+|+|..+... .....|.+|.++.
T Consensus 160 ~i~~a~S~D~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~---------------g~~~l~~~~~~~~~~~~y~vg~~~~ 224 (276)
T cd08979 160 AIGLATSPDLIHWTPVPPPPGPRTGYDDGQLEVPQVVKID---------------GRWYLLYSGRNEDAKTGYRVGTALF 224 (276)
T ss_pred EEEEEECCCCCcceECCCCCCCCCcccCCcCccceEEEEC---------------CEEEEEEEecCccCCccEEEEeccc
Confidence 88999999999999988763 222234699999999995 27888888653 4467899998765
Q ss_pred CCCcccCCCCCcccccceeeecC-CCcccceeecCCCCcEEEEEEccCC
Q 011094 358 ANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINET 405 (494)
Q Consensus 358 ~~~~f~p~~~~~d~g~~~rlD~G-~fYA~qtf~d~~~~Rril~GW~~~~ 405 (494)
. .|+|.. ...+|+| +|||+|++.+..++||+++|||+++
T Consensus 225 ~--~~~~~~-------~~~~~~g~~~ya~~~~~~~~~~~~~~~gw~~~~ 264 (276)
T cd08979 225 G--PGRPLT-------LAELLDRTDLYAARPVPDGEGGGVVLEGFVQFG 264 (276)
T ss_pred C--Cccccc-------cccccCCCCceeEEeccccCCCcEEEEEEeecc
Confidence 4 455431 1358888 8999999998656999999999976
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta |
| >cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=296.71 Aligned_cols=268 Identities=26% Similarity=0.396 Sum_probs=202.6
Q ss_pred cCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceecc----CCCCcCCCcEEeeeEEEccCCeEEEE
Q 011094 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV----PDQWYDINGVWTGSATILPDGQIVML 206 (494)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~----Pd~~~D~~Gv~SGSavv~~dG~~~~~ 206 (494)
|||+ +++++|+||||||++|.+ ++++|+||+|+||+||++++.++. |..+++..+||+|+++...+|+++|+
T Consensus 1 ~DP~-i~~~~g~yyl~~~~~~~~---~~~~~~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~wap~v~~~~~g~~~l~ 76 (286)
T cd08772 1 ADPN-LIKYNGTYYIFFSGDDKN---GNPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGGIWAPSIVYIENGKFYLY 76 (286)
T ss_pred CCCe-EEEECCEEEEEEEccCCC---CCceEEEEECCCcCcceECCccchhhcccCCCCCCCcEecceEEEcCCCCEEEE
Confidence 7999 999999999999999875 678999999999999999998874 67777889999999987655999999
Q ss_pred EeccCC-CccceEEEEEEcCCCCCCcceEEEcCCCceecC-CCCCCCCCCCCCeeEeecCCCeEEEEEeeec-CCeeEEE
Q 011094 207 YTGSTD-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVP-PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISL 283 (494)
Q Consensus 207 YTG~~~-~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~-p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-~~~G~v~ 283 (494)
||+... ...+.|++|+|+|+. ..|++...+||+.. +......++|||+|+ .+++|+|||++++.. ...+.+.
T Consensus 77 yt~~~~~~~~~~i~~a~s~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~-~d~dG~~y~~~~~~~~~~~~~i~ 151 (286)
T cd08772 77 YTDVSFTKNQQTIGVATAEDGN----GPWTDYIGGPVLPDNPPAADVSNFRDPFVF-EDDDGKWYLVFGSGDHHNFGGIF 151 (286)
T ss_pred EEeecCCCCceeEEEEEcCCCC----CCCccccccccccCCCCccccccccCCeEE-EcCCCCEEEEEccccCCCCCeEE
Confidence 999753 346889999998863 45776655566543 223344679999995 456699999999763 2356788
Q ss_pred EEEeCCCCCCEEcCcc--cccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCC------CceeEEEEEEe
Q 011094 284 VYQTTDFKTYELLDEY--LHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD------TKVDHYAIGTY 355 (494)
Q Consensus 284 lY~S~Dl~~W~~~~~l--l~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~------~~~~~Y~iG~~ 355 (494)
+++|+|+.+|+..+.. .......+++|||++|+++ .+++|..|... .....|++++.
T Consensus 152 ~~~s~d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~---------------g~~yL~~s~~~~~~~~~~y~~~~~~~~~ 216 (286)
T cd08772 152 LYESDDDTTWKKGSAELLISEGEGGKQIEGPGLLKKN---------------GKYYLFYSINGTGRVDSTYSIGYARSES 216 (286)
T ss_pred EEEcCCCCCcccccceeeEeeccCCCceeccEEEEEC---------------CEEEEEEEcCCCcCCCCCcceEEEEccC
Confidence 9999999999987764 2222345699999999985 26777777654 23456777764
Q ss_pred cCCCCcccCCCCCc-ccccceeeecC-CCcccceeecCCCCcEEEEEEccCCCCCCCCcCCCCccCCcccEEE
Q 011094 356 NPANDKWTPDNPEE-DVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTV 426 (494)
Q Consensus 356 d~~~~~f~p~~~~~-d~g~~~rlD~G-~fYA~qtf~d~~~~Rril~GW~~~~d~~~~~~~~gWag~lslPR~l 426 (494)
+ .+.|++..... -.-.....|.+ .+||+++|.++ ++|++|++|+.+.+.... ...+|+++|+|||++
T Consensus 217 ~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~ 285 (286)
T cd08772 217 D--TGPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYADA-PTYGWGRSLAIPRLL 285 (286)
T ss_pred C--CCCcccCCCCCCccccccccCCCCCCCccEEEECC-CCCEEEEEEeccCCcccc-ccCCCcccccccccc
Confidence 3 45676543210 00011234556 79999999987 799999999998765333 567999999999986
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 |
| >cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-26 Score=235.07 Aligned_cols=183 Identities=21% Similarity=0.224 Sum_probs=132.1
Q ss_pred CCccce-EECCEEEEEEeeCCCC----CCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEE
Q 011094 132 DPNGPL-FYKGWYHLFYQYNPDS----AVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML 206 (494)
Q Consensus 132 DPNG~~-y~~G~YHLFYQ~nP~~----~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~ 206 (494)
|..|-+ -++|+.-+|+...|.. +.|+.++|||++|+||+||++.+. |.|+.++|..|||||||++..||+++||
T Consensus 9 d~~g~~~~~~G~~~vfaL~a~~~~~~~~rh~~~~wgh~~S~dlv~W~~~~~-l~p~~~~d~~g~wSGsa~~~~dg~~~lf 87 (349)
T cd08997 9 DRDGEVASYNGYEVIFALTADRNLDPDDRHGDARIGYFYSRAGGNWIDGGK-VFPDGLSPGSREWSGSATLDDDGTVQLF 87 (349)
T ss_pred CCCCCEEEECCEEEEEEEecCCCCCCCCCcCceEEEEEEeCCCCcccCCCc-cCCCCcccCCCeEcceEEEeCCCeEEEE
Confidence 556633 4688754999877664 467899999999999999999554 6788999999999999987667999999
Q ss_pred EeccCC----CccceEEEEEEcCCCCCCcceEEEcC--CCceecCC--------------CCCCCCCCCCCeeEeecCCC
Q 011094 207 YTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYP--GNPVLVPP--------------RHIGPKDFRDPTTAWAGPDG 266 (494)
Q Consensus 207 YTG~~~----~~~q~q~lA~S~D~~d~lL~~W~K~~--~nPVi~~p--------------~g~~~~~fRDP~V~w~~~dg 266 (494)
|||+.. .....|++|.+.+.. +..|.+.. ..+++.+. ++-...+||||+|+..+++|
T Consensus 88 YTg~~~~~~~~~~~~Q~ia~a~~~~---~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~G 164 (349)
T cd08997 88 YTAVGRKGEPQPTFTQRLALARGTL---SVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPETG 164 (349)
T ss_pred EeccccCCCCCCCceEEEEEEECCC---cceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEecCCCC
Confidence 999853 235678887765531 22333321 12343321 11125689999994333379
Q ss_pred eEEEEEeeecC-C---------------------------eeEEEEE--EeCCCCCCEEcCcccccCCCCCceEeccEEE
Q 011094 267 KWRLTIGSKIG-K---------------------------TGISLVY--QTTDFKTYELLDEYLHAVPGTGMWECVDFYP 316 (494)
Q Consensus 267 ~w~MviGa~~~-~---------------------------~G~v~lY--~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~ 316 (494)
+|||+++++.. . .|+|.++ +|+|+.+|++.++|+.+......||||++|+
T Consensus 165 ~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~PL~~a~~v~d~~E~P~v~~ 244 (349)
T cd08997 165 KTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLPPLLEANGVNDELERPHVVF 244 (349)
T ss_pred cEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCCCCCCcEEcCccccCCCcCCceEcceEEE
Confidence 99999998632 2 3555555 6779999999999986543355799999999
Q ss_pred ec
Q 011094 317 VA 318 (494)
Q Consensus 317 l~ 318 (494)
++
T Consensus 245 ~~ 246 (349)
T cd08997 245 HN 246 (349)
T ss_pred EC
Confidence 96
|
Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n |
| >cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-22 Score=202.47 Aligned_cols=189 Identities=19% Similarity=0.263 Sum_probs=140.9
Q ss_pred eeeecCCCcccCCccceEE-CCEEEEEEeeCCCCCC---C-CCcEEEEEEecCcc-CeeecceeccCC--CCcCCCcEEe
Q 011094 121 FHFQPEKNWMNDPNGPLFY-KGWYHLFYQYNPDSAV---W-GNITWGHAVSADLI-HWLYLPIAMVPD--QWYDINGVWT 192 (494)
Q Consensus 121 ~Hf~P~~gwmNDPNG~~y~-~G~YHLFYQ~nP~~~~---w-g~~~WGHA~S~DLv-hW~~~p~AL~Pd--~~~D~~Gv~S 192 (494)
.+|..+..++-+|. ++.. +|+||||||..|.+.. | ....||||+|+|+. +|+..+++|.|+ ..||..++++
T Consensus 4 ~~~~~~~~~~w~~~-vi~~~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~~wd~~~~~~ 82 (291)
T cd08994 4 SGLEDEDYSVWGGS-IIKGPDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQEVVLPGRGGGYWDARTTHN 82 (291)
T ss_pred ceeeeCCeEEEecc-eEECCCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEeeeEcCCCCCCcccCCCccC
Confidence 46778888899998 6665 4899999999887643 2 23569999999987 899999999887 4689999999
Q ss_pred eeEEEccCCeEEEEEeccCC-------CccceEEEEEEcCCCCCCcceEEEcCCCceecCC------------------C
Q 011094 193 GSATILPDGQIVMLYTGSTD-------KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP------------------R 247 (494)
Q Consensus 193 GSavv~~dG~~~~~YTG~~~-------~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p------------------~ 247 (494)
++++. .+|+++|+|||... ...+.+++|+|++. +..|++. .+||+.+. .
T Consensus 83 P~vi~-~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~----~g~w~~~-~~pvl~~~~~~~~~~~~~~p~v~~~~~ 156 (291)
T cd08994 83 PTIKR-FDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSL----DGPWKRS-DQPILEPRPGGWDNLITSNPAVTRRPD 156 (291)
T ss_pred CeEEE-ECCEEEEEEEcccCCcccccCCCCceEEEEEeCCC----CCCcEEC-CCceecCCCCccccccccCCCeEEeCC
Confidence 99975 68999999999753 23467788888763 2456664 34444220 0
Q ss_pred -------------------------------------------CCCCCCCCCCeeEeecCCCeEEEEEeeec----CCee
Q 011094 248 -------------------------------------------HIGPKDFRDPTTAWAGPDGKWRLTIGSKI----GKTG 280 (494)
Q Consensus 248 -------------------------------------------g~~~~~fRDP~V~w~~~dg~w~MviGa~~----~~~G 280 (494)
.....++|||+| |+ .+|+|+|++++.. +..+
T Consensus 157 g~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~~~~~~~~dP~V-~~-~~g~yym~~~~~~~~~~~~~~ 234 (291)
T cd08994 157 GSYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEPGDNGNTEDPFV-WY-DKGQFHMIVKDMLGYVTGEKG 234 (291)
T ss_pred CCEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccccCCCCCceeCceE-EE-eCCEEEEEEeecccCcCCCCc
Confidence 001235799999 65 4699999999874 2467
Q ss_pred EEEEEEeCCCCCCEEcCcccc----c-CC----CCCceEeccEE-Eec
Q 011094 281 ISLVYQTTDFKTYELLDEYLH----A-VP----GTGMWECVDFY-PVA 318 (494)
Q Consensus 281 ~v~lY~S~Dl~~W~~~~~ll~----~-~~----~~gmwECPdlf-~l~ 318 (494)
.+.+|+|+|+++|++.+.+.. . .. ...|||||++| ..+
T Consensus 235 ~i~~a~S~Dg~~W~~~~~~~~~~~~~~~~~~~~~~~~~erP~v~~~~~ 282 (291)
T cd08994 235 GGAYFRSKDGIHWKLAPGLAYSTTVEWTDGTTEDWGRLERPQVLLDED 282 (291)
T ss_pred eEEEEECCCCCCceecCcceeeeeEEcCCCcccccccccCCEEEEcCC
Confidence 899999999999999987741 1 11 23599999999 664
|
This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f |
| >cd08984 GH43_5 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-19 Score=183.89 Aligned_cols=184 Identities=21% Similarity=0.263 Sum_probs=134.6
Q ss_pred cCCcc-ccccccceeeeecCC----CcccCCccceEECCEEEEEEeeCCCCC--CCCCcEEEEEEecCccCeeecceecc
Q 011094 108 NWTNA-MFTWQRTSFHFQPEK----NWMNDPNGPLFYKGWYHLFYQYNPDSA--VWGNITWGHAVSADLIHWLYLPIAMV 180 (494)
Q Consensus 108 ~~~~~-~~~w~Rp~~Hf~P~~----gwmNDPNG~~y~~G~YHLFYQ~nP~~~--~wg~~~WGHA~S~DLvhW~~~p~AL~ 180 (494)
..+.. +..|+|...-+.+.. .-+.+|. +++++|+||||||++|..+ .++.++||||+|+||++|++.+++..
T Consensus 52 a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~-v~~~~G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl~~w~~~~~~~~ 130 (294)
T cd08984 52 ASSKDGGATWTYRGTADGLEFECGRNTFWAPE-VVWHGGVYHMYVTYIPGVPPDWGGPRRIVHYTSPNLWDWTFVGRVDL 130 (294)
T ss_pred EEeCCCCCCCEEeeeeccCCCCCcccceeCce-EEEECCEEEEEEEecCCCCcccCCCcEEEEEECCCcCcceECCcccc
Confidence 34455 667766654333222 2235687 7899999999999998753 33578999999999999999887532
Q ss_pred CCCCcCCCcEEeeeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeE
Q 011094 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA 260 (494)
Q Consensus 181 Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~ 260 (494)
+..++++++++.+.||+++|+||+... .+.+++|.|.|+ .+|++. .+++.. ...++|+|
T Consensus 131 -----~~~~~iD~~vf~~~dg~~yl~y~~~~~--~~~~~~a~s~D~-----~~w~~~--~~~i~~------~~~EgP~v- 189 (294)
T cd08984 131 -----DSDRVIDACVFKLPDGRWRMWYKDERR--GSTTYAADSEDL-----YHWTVE--GPVLGD------RPHEGPNV- 189 (294)
T ss_pred -----CCCCcEEeEEEEeCCCEEEEEEECCCC--CeEEEEEECCCC-----CEEEeC--CccccC------CCCCCCCe-
Confidence 246789999987667999999998643 345689999885 899985 355542 13479999
Q ss_pred eecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcCcccccCC----CCCceEeccEEEec
Q 011094 261 WAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVP----GTGMWECVDFYPVA 318 (494)
Q Consensus 261 w~~~dg~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~~~~----~~gmwECPdlf~l~ 318 (494)
|+ .+|+|||+++. ..| +.+|+|+|+.+|++.+.++.... ...+++||+++..+
T Consensus 190 ~k-~~g~yym~~~~---~~g-~~~~~S~D~~~W~~~~~~l~~~~~~~~~~~~~~H~~i~~~~ 246 (294)
T cd08984 190 FR-WKGYYWMIIDE---WKG-LGVYRSKDAENWERQGGILLKPGTRPDDGAKGRHADVVVTG 246 (294)
T ss_pred eE-ECCEEEEEEcC---Cce-EEEEECCChhhcEECCeeeccCCCCccccccccCCcEEEeC
Confidence 54 57999999754 235 56999999999999998775321 12378999999764
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.9e-19 Score=179.43 Aligned_cols=160 Identities=19% Similarity=0.256 Sum_probs=122.6
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecc-eeccC--CCCcCCCcEEeeeEEEccCCeEEEEEe
Q 011094 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP-IAMVP--DQWYDINGVWTGSATILPDGQIVMLYT 208 (494)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p-~AL~P--d~~~D~~Gv~SGSavv~~dG~~~~~YT 208 (494)
|| |+++++|+||||||.++.. +.++||||+|+|++||++.+ +.|.| +..++..+|++++++. .+|+++|+||
T Consensus 2 nP-~v~~~~G~y~l~y~~~~~~---~~~~ig~A~S~Dg~~~~~~~~~~i~p~~~~~~~~~gv~dP~v~~-~~g~y~m~Yt 76 (268)
T cd08993 2 NP-AVVYDNGEFYLLYRAAGND---GVIRLGLARSRDGLHFEIDPDPPVWPPPEDGFEEGGVEDPRIVK-IDDTYYITYA 76 (268)
T ss_pred cC-eEEEECCEEEEEEEEECCC---CceEEEEEEECCCceEEECCcceEcCCCCCcccccCccCcEEEE-ECCEEEEEEE
Confidence 67 5899999999999987643 56899999999999999876 44566 5567889999999975 7999999999
Q ss_pred ccCC-CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEee-cCCCeEEEEEeeec---CCeeEEE
Q 011094 209 GSTD-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWA-GPDGKWRLTIGSKI---GKTGISL 283 (494)
Q Consensus 209 G~~~-~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~-~~dg~w~MviGa~~---~~~G~v~ 283 (494)
+... ...+.+++|.|+|+ ++|+|.. .+ +. + ..||+.+ |. ..+|+|+|++.... +..+.+.
T Consensus 77 a~~~~~~~~~i~lA~S~D~-----~~W~~~~-~~-~~-~------~~~d~~~-~p~~~~g~y~m~~r~~~~~~~~~~~I~ 141 (268)
T cd08993 77 ARPNAPNGTRIGLATTKDF-----ITFERLG-TS-LV-P------NNRDGIL-FPEKINGKYVMLHRPFEYGGTSPPDMW 141 (268)
T ss_pred ccCCCCCCcEEEEEEeCCc-----ceEEEec-cc-CC-C------CCCCEEE-eeEEECCEEEEEEccccCCCCCCCcEE
Confidence 9863 34578999999985 8999973 21 11 1 2478888 43 35899999996432 3457889
Q ss_pred EEEeCCCCCCEEcCcccccCCCCCceEecc
Q 011094 284 VYQTTDFKTYELLDEYLHAVPGTGMWECVD 313 (494)
Q Consensus 284 lY~S~Dl~~W~~~~~ll~~~~~~gmwECPd 313 (494)
+++|+|+.+|+..+.++... .+.||+-.
T Consensus 142 lA~S~Dl~~W~~~~~~~~~~--~~~wd~~~ 169 (268)
T cd08993 142 LSFSPDLVHWGNHRFVLSPR--PNHWEQLK 169 (268)
T ss_pred EEECCCcCccCCCeEEecCC--CCceeece
Confidence 99999999999877766432 23476543
|
This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.5e-19 Score=178.89 Aligned_cols=192 Identities=15% Similarity=0.171 Sum_probs=138.1
Q ss_pred CCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCC-CCcCCCcEEeeeEEEccCCeEEE
Q 011094 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPD-QWYDINGVWTGSATILPDGQIVM 205 (494)
Q Consensus 127 ~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd-~~~D~~Gv~SGSavv~~dG~~~~ 205 (494)
.||++||+ +++++|+||||++....+. ....|.+++|+||+||++++.+|.+. ..++..++|+++++. .+|+++|
T Consensus 5 ~g~~~DP~-i~~~~g~yY~~~t~~~~~~--~~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~wAP~v~~-~~g~yy~ 80 (275)
T cd09004 5 PGWYADPE-IRIFGGTYYIYPTSDGAGG--EQTPFDVFSSKDLVNWTKEGIILDMADVSWANRAAWAPSVIE-RNGKYYF 80 (275)
T ss_pred CCCCCCCC-eEEECCEEEEEEeccCCCC--CeeEEEEEECCCCCCceECcccccccCCcccCCCcCCCeEEE-ECCEEEE
Confidence 56899998 5788999999998765322 24679999999999999999998764 356778999999975 6899999
Q ss_pred EEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEE
Q 011094 206 LYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVY 285 (494)
Q Consensus 206 ~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY 285 (494)
+||+. +.+++|+|+++. ..|++..++|++.... .....+||.|+ .+++|+|||++++. .++.++-
T Consensus 81 yys~~-----~~i~va~s~~p~----gp~~~~~~~p~~~~~~--~~~~~iDp~vf-~d~dG~~yl~~~~~---~~~~i~~ 145 (275)
T cd09004 81 YFSAN-----GGIGVAVADSPL----GPFKDALGKPLIDKFT--FGAQPIDPDVF-IDDDGQAYLYWGGW---GHCNVAK 145 (275)
T ss_pred EEEcC-----CcEEEEEeCCCC----CCCCCCCCCccccCCc--CCCCccCCCeE-ECCCCCEEEEEcCc---CCEEEEE
Confidence 99986 457899998763 5788755678876432 23568999994 55789999999863 1222234
Q ss_pred EeCCCCCCEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCCceeEEEEE
Q 011094 286 QTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIG 353 (494)
Q Consensus 286 ~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~~~~~Y~iG 353 (494)
-|.|+.+|+.....+. .....+.|||.+|+.++ +++|..|........|.+|
T Consensus 146 l~~d~~~~~~~~~~~~-~~~~~~~EgP~i~k~~G---------------~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 146 LNEDMISFDGERDGSE-ITPKNYFEGPFMFKRNG---------------IYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred ECCCcccccCcceeee-ccCCCceecceEEEECC---------------EEEEEEECCCCCCCCceEE
Confidence 5788988875443321 11234899999999852 6677777543322234444
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08999 GH43_ABN_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.7e-17 Score=162.69 Aligned_cols=206 Identities=19% Similarity=0.161 Sum_probs=138.5
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC-cCCCcEEeeeEEEccCCeEEEE
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW-YDINGVWTGSATILPDGQIVML 206 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~-~D~~Gv~SGSavv~~dG~~~~~ 206 (494)
+.+-||. +++++|+|+||+..... ..|++++|+||+||+..+.+|.+... .+..++|.++++. .+|+++|+
T Consensus 6 ~~~~DP~-i~~~~g~yy~~~t~~~~------~~i~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~waP~v~~-~~g~y~~~ 77 (287)
T cd08999 6 GDFPDPS-VIRVDGTYYAYATNGNG------PNVPIATSTDLVNWTYLGDAFPKLPRWWTGGDFWAPDVSY-VNGKYVLY 77 (287)
T ss_pred CCCCCCe-EEEECCEEEEEEeCCCC------CcEEEEECCCCCCcEECCcccCCCCCcccCCCccCceEEE-ECCEEEEE
Confidence 4567997 88889999999985432 57999999999999999988877654 4567889888865 68999999
Q ss_pred EeccCCC-ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCee---EE
Q 011094 207 YTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTG---IS 282 (494)
Q Consensus 207 YTG~~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G---~v 282 (494)
||+.... ..+.+++|+|+|.. ..|++....++. .+. .....+||.|+ .+++|+|||++++.....| .+
T Consensus 78 y~~~~~~~~~~~i~~a~s~~p~----g~~~~~~~~~~~-~~~--~~~~~~Dp~v~-~d~dG~~Yl~~~~~~~~~~~~~~i 149 (287)
T cd08999 78 YSARDKGSGGQCIGVATADSPL----GPFTDHGKPPLC-CPE--GEGGAIDPSFF-TDTDGKRYLVWKSDGNSIGKPTPI 149 (287)
T ss_pred EEeecCCCCCEEEEEEECCCCC----CCCccCCcceEe-cCC--CCCCccCCCeE-ECCCCCEEEEEeccCCCCCCCceE
Confidence 9998652 34667889887752 579886433333 222 22467999995 4568999999986532211 12
Q ss_pred EEE-EeCCCCCCEEcCc-ccccC--CCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCCcee--EEEEEEe-
Q 011094 283 LVY-QTTDFKTYELLDE-YLHAV--PGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVD--HYAIGTY- 355 (494)
Q Consensus 283 ~lY-~S~Dl~~W~~~~~-ll~~~--~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~~~~--~Y~iG~~- 355 (494)
.+. .|+|+.+|..... ++... ....++|||.+|+.+ .+++|..|....... .|.+|-.
T Consensus 150 ~~~~ls~d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~---------------g~yyl~~S~~~~~~~~~~y~i~~~~ 214 (287)
T cd08999 150 YLQELSADGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRG---------------GYYYLFYSAGGCCSGASTYAVGVAR 214 (287)
T ss_pred EEEEeCCCCccccCCcEeeecccccccCCceEeeEEEEEC---------------CEEEEEEEcCCccCCCCCEEEEEEE
Confidence 232 3789988864332 22211 123489999999985 267777776432221 4555432
Q ss_pred -cCCCCcccC
Q 011094 356 -NPANDKWTP 364 (494)
Q Consensus 356 -d~~~~~f~p 364 (494)
+...+.|+.
T Consensus 215 s~~~~Gpw~~ 224 (287)
T cd08999 215 SKSLLGPYVK 224 (287)
T ss_pred eCCCcCCcCC
Confidence 233456764
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase | Back alignment and domain information |
|---|
Probab=99.72 E-value=4e-16 Score=155.93 Aligned_cols=195 Identities=14% Similarity=0.157 Sum_probs=138.7
Q ss_pred CCccceEECCEEEEEEeeCCCCCC---CCCcEEEEEEecCccCeeecceeccCCC--CcCCCcEEeeeEEEccCCeEEEE
Q 011094 132 DPNGPLFYKGWYHLFYQYNPDSAV---WGNITWGHAVSADLIHWLYLPIAMVPDQ--WYDINGVWTGSATILPDGQIVML 206 (494)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~---wg~~~WGHA~S~DLvhW~~~p~AL~Pd~--~~D~~Gv~SGSavv~~dG~~~~~ 206 (494)
||. +++++|+|+||......... .....|..++|+||+||+..+.+|.+.. .++..++|.++++. .+|+++||
T Consensus 2 DP~-~~~~~~~yy~~~t~~~~~~~~~~~~~~~~~v~~S~Dl~~W~~~g~~l~~~~~~~~~~~~~wAP~i~~-~~g~yy~y 79 (274)
T cd08990 2 DPA-AHVFNGRVYIYTSHDEAGGGGDDFCMNDYHVFSSPDLVNWTDHGVILSVTDFPAWAKGQAWAPDVVE-KNGKYYLY 79 (274)
T ss_pred CCC-cEEECCEEEEEeCCCCCCCCCCccccceEEEEECCCCCCcEECcccccCCCCCccccCCcCcCeEEE-ECCEEEEE
Confidence 897 78889999999987644332 2234589999999999999999887543 36788999999875 79999999
Q ss_pred EeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEE
Q 011094 207 YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQ 286 (494)
Q Consensus 207 YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~ 286 (494)
||+......+.+++|+|+|+. ..|++....|++...+ ......||.++ .+++|++||++++. .++.+.-.
T Consensus 80 y~~~~~~~~~~igva~s~~p~----Gpw~~~~~~~~~~~~~--~~~~~iDp~vf-~d~dG~~yl~~~~~---~~~~~~~l 149 (274)
T cd08990 80 FPARDKDGGFAIGVAVSDSPA----GPFKDAGGPILITTPS--GGWYSIDPAVF-IDDDGQAYLYWGGG---LGLRVAKL 149 (274)
T ss_pred EEeecCCCceEEEEEEeCCCC----CCCCCCCCccccccCC--CCCCccCCcEE-ECCCCCEEEEECCc---CCEEEEEe
Confidence 999754345678899997752 5798865555554211 23467899994 55789999999864 34444556
Q ss_pred eCCCCCCEEcCccccc-----CCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCCceeEEEEE
Q 011094 287 TTDFKTYELLDEYLHA-----VPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIG 353 (494)
Q Consensus 287 S~Dl~~W~~~~~ll~~-----~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~~~~~Y~iG 353 (494)
|+|+.+|+.....+.. ....+..|+|.+|+.+ .+++|..|.+......|++.
T Consensus 150 ~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~---------------G~YYl~yS~~~~~~~~~a~s 206 (274)
T cd08990 150 KPDMLSLKGEPVEIVITDGAGDELRRFFEAPWVHKRN---------------GTYYLSYSTGDPEEIAYATS 206 (274)
T ss_pred CccccccCCCcEEEEeccccCCCCCCcccceeEEEEC---------------CEEEEEEECCCCcEEEEEEc
Confidence 8899999765444321 1123478999999885 26777777654334445554
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of |
| >cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F | Back alignment and domain information |
|---|
Probab=99.67 E-value=6.2e-15 Score=144.85 Aligned_cols=202 Identities=22% Similarity=0.191 Sum_probs=133.4
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceecc----CCCCcCCCcEEeeeEEEccCCeEEEEE
Q 011094 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV----PDQWYDINGVWTGSATILPDGQIVMLY 207 (494)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~----Pd~~~D~~Gv~SGSavv~~dG~~~~~Y 207 (494)
||. ++.++|+|+||+..... ....++.++|+||++|+..+.++. +....+..++|.++++. .+|+++|+|
T Consensus 2 DP~-v~~~~~~yyl~~t~~~~----~~~~i~i~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~y 75 (271)
T cd08978 2 DPY-ILRYNGKYYLYGSTDDA----AGPGVQVWSSKDLVNWRYEGAVFVAWRGRGEAKDSGGLWAPEVIY-YEGKYYLYY 75 (271)
T ss_pred CCc-EEEECCEEEEEEecCCc----CCCcEEEEECCccCCcEECCcccccccccCCcccCCceeCCeEEE-ECCEEEEEE
Confidence 897 88899999999987542 234689999999999999998875 44455678899999975 679999999
Q ss_pred eccCC-CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecC--CeeEEEE
Q 011094 208 TGSTD-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG--KTGISLV 284 (494)
Q Consensus 208 TG~~~-~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~--~~G~v~l 284 (494)
|+... ...+.+++|+|+|+ ..|.+....+ .+. ......+||.++ .+++|++||+.++... ..+.+.+
T Consensus 76 ~~~~~~~~~~~i~~a~s~d~-----~g~~~~~~~~---~~~-~~~~~~iDp~vf-~d~dg~~yl~~~~~~~~~~~~~i~~ 145 (271)
T cd08978 76 SVSDFDYNGSGIGVATSEDP-----TGPFEDKVIR---PPT-SNNGNSIDPTVF-KDDDGKYYLYYGSGDPGAGFGGIYI 145 (271)
T ss_pred EcccCCCCcccEEEEECCCC-----CCCccccccC---cCc-cCCCCccCcceE-EcCCCCEEEEEecccCCCCCCcEEE
Confidence 99753 23467889999886 4555532211 111 123467899995 4567999999987532 2456777
Q ss_pred EEeCCCCCCEEcCcc-c-ccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCCceeEEEEEE--ecCCCC
Q 011094 285 YQTTDFKTYELLDEY-L-HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGT--YNPAND 360 (494)
Q Consensus 285 Y~S~Dl~~W~~~~~l-l-~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~~~~~Y~iG~--~d~~~~ 360 (494)
+++++...|...... . .......+.|||.+|+.+ .+++|..|........|.++- -+...+
T Consensus 146 ~~l~~~~~~~~~~~~~~~~~~~~~~~~EgP~~~k~~---------------g~yyl~ys~~~~~~~~y~~~~~~s~~~~G 210 (271)
T cd08978 146 SELTDDLTKPTGPPVLSASSGNNNAVTEGPTIFKKN---------------GYYYLTYSANGTGDYGYNIGYATSDSIDG 210 (271)
T ss_pred EEECcccccccCCceeeeeeccCCCceEccEEEEEC---------------CEEEEEEEeCCCCCCCceEEEEECCCCCC
Confidence 777665444322221 1 111233589999999975 267777776543223355543 333345
Q ss_pred cccC
Q 011094 361 KWTP 364 (494)
Q Consensus 361 ~f~p 364 (494)
.|+.
T Consensus 211 p~~~ 214 (271)
T cd08978 211 PYVK 214 (271)
T ss_pred CcCc
Confidence 5653
|
This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma |
| >cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.3e-14 Score=144.20 Aligned_cols=199 Identities=18% Similarity=0.148 Sum_probs=132.3
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC-CcCCCcEEeeeEEEccCCeEEEEEecc
Q 011094 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ-WYDINGVWTGSATILPDGQIVMLYTGS 210 (494)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~-~~D~~Gv~SGSavv~~dG~~~~~YTG~ 210 (494)
||. +++++|+|+||+..... ...+..++|+||+||+.++.++.+.. .+...++|.++++. .+|+++|+||+.
T Consensus 2 DP~-v~~~~g~yyl~~t~~~~-----~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ys~~ 74 (294)
T cd08991 2 DPF-VLRYNGKYYAYGTGGAD-----GRGFAVYSSPDLVDWKLHGGALLALDDDWGRRGFWAPEVYY-YNGKFYMYYSAN 74 (294)
T ss_pred CCe-EEEECCEEEEEEeCCCC-----CCeeEEEECCCCCCceECCccccCCCCCccCCcEEccEEEE-ECCEEEEEEEec
Confidence 897 88899999999876532 23578999999999999998887655 36778999999875 689999999997
Q ss_pred CCC-ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCC---eeEEEEEE
Q 011094 211 TDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK---TGISLVYQ 286 (494)
Q Consensus 211 ~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~---~G~v~lY~ 286 (494)
... ..+.+++|+|+|+. ..|++....++ .. + ...+||.++ .++||+|||+.+..... .++.+.--
T Consensus 75 ~~~~~~~~i~~a~s~~p~----gp~~~~~~~~~-~~--~---~~~iD~~vf-~d~dG~~yl~~~~~~~~~~~~~i~~~~l 143 (294)
T cd08991 75 DRDEKTEHIGVAVSDSPL----GPFRDIKKPPI-DF--E---PKSIDAHPF-IDDDGKPYLYYSRNNYGNRVSDIYGTEL 143 (294)
T ss_pred cCCCCcceEEEEEeCCCC----CCCCcCCCCcc-cC--C---CcccCCceE-ECCCCCEEEEEEecCCCCcccceEEEEE
Confidence 543 45778999998752 56877532222 21 1 346799995 45679999999864321 34544556
Q ss_pred eCCCCCCEEcCcc----ccc--------------CCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCCcee
Q 011094 287 TTDFKTYELLDEY----LHA--------------VPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVD 348 (494)
Q Consensus 287 S~Dl~~W~~~~~l----l~~--------------~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~~~~ 348 (494)
+.|+.+|.-.... ... .....+.|+|.+++.+ .+++|..|.......
T Consensus 144 ~~d~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~---------------g~yyl~ys~~~~~~~ 208 (294)
T cd08991 144 VDDKLSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHN---------------GRYYLTYSANHYENE 208 (294)
T ss_pred ccceeeeccceeeccccccccccccccccccccccccCceeeCcEEEEEC---------------CEEEEEEECCCCCCC
Confidence 7888777521110 000 0112479999999985 267777775433222
Q ss_pred EEEEEE--ecCCCCccc
Q 011094 349 HYAIGT--YNPANDKWT 363 (494)
Q Consensus 349 ~Y~iG~--~d~~~~~f~ 363 (494)
.|.+|- -+...+.|+
T Consensus 209 ~y~~~~a~s~~~~gp~~ 225 (294)
T cd08991 209 DYGVGYATADSPLGPWT 225 (294)
T ss_pred CceEEEEEcCCCCCCcE
Confidence 344332 232235665
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08998 GH43_ABN_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.57 E-value=2e-13 Score=137.49 Aligned_cols=169 Identities=20% Similarity=0.155 Sum_probs=115.1
Q ss_pred ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC-------CcCCCcEEeeeEEEccCCe
Q 011094 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ-------WYDINGVWTGSATILPDGQ 202 (494)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~-------~~D~~Gv~SGSavv~~dG~ 202 (494)
+.||. +++++|+|+||+... .+++++|+||+||++.+.+|.+.. ..+..++|.++++. .+|+
T Consensus 1 ~~DP~-v~~~~~~yyl~~t~~---------~i~i~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~wAP~v~~-~~g~ 69 (288)
T cd08998 1 VHDPS-IIKEGDTYYLFSTGN---------GIAIAKSKDLGNWTYVGSVFPTGPPWWSSIDPGGSGNLWAPDVIY-LNGK 69 (288)
T ss_pred CCCCe-EEEECCEEEEEEcCC---------CeEEEECCCCCCcEECCccccCCCccccccccCCCCCccCCeEEE-ECCE
Confidence 46997 889999999999864 589999999999999998876543 23467899999875 6999
Q ss_pred EEEEEeccCCC-ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeE
Q 011094 203 IVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGI 281 (494)
Q Consensus 203 ~~~~YTG~~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~ 281 (494)
++||||+.... ..+.+++|+|+|.. ...|++. +||+...++......+||.++ .+++|++||+.++.. .|+
T Consensus 70 yyl~ys~~~~~~~~~~i~va~s~~~~---~gpw~~~--~~v~~~~~~~~~~~~iDp~vf-~d~dG~~Yl~~~~~~--~~i 141 (288)
T cd08998 70 YYLYYSVSTFGSNRSAIGLATSDTLP---DGPWTDH--GIVIESGPGRDDPNAIDPNVF-YDEDGKLWLSFGSFW--GGI 141 (288)
T ss_pred EEEEEEEEeCCCCceEEEEEEeCCCC---CCCCEEc--ceeeecCCCCCCcccccCCEE-EcCCCCEEEEeeecc--CCE
Confidence 99999987543 34667899998751 2689875 588765433233467899995 456899999998642 232
Q ss_pred EEEEE-eCC---CCCCEEcCc-ccccCCCCCceEeccEEEec
Q 011094 282 SLVYQ-TTD---FKTYELLDE-YLHAVPGTGMWECVDFYPVA 318 (494)
Q Consensus 282 v~lY~-S~D---l~~W~~~~~-ll~~~~~~gmwECPdlf~l~ 318 (494)
. +.+ +.| ...|..... +.......+..|-|.+|+-+
T Consensus 142 ~-~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~Egp~~~k~~ 182 (288)
T cd08998 142 F-LVELDPKTGKPLYPGGYGYNIAGRPRGHGAIEAPYIIYRG 182 (288)
T ss_pred E-EEEeCcccCCccCCCCcceEEeccCCCCCceeeeEEEEeC
Confidence 1 222 222 223321111 11111123468999999875
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.3e-13 Score=142.86 Aligned_cols=170 Identities=21% Similarity=0.275 Sum_probs=121.0
Q ss_pred ceeeeecCCC-cccCCccceEECCEEEEEEeeCCC-----------CC--CCCCcEEEEEEecCccCeeecceeccCCC-
Q 011094 119 TSFHFQPEKN-WMNDPNGPLFYKGWYHLFYQYNPD-----------SA--VWGNITWGHAVSADLIHWLYLPIAMVPDQ- 183 (494)
Q Consensus 119 p~~Hf~P~~g-wmNDPNG~~y~~G~YHLFYQ~nP~-----------~~--~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~- 183 (494)
|..=+.+..+ ...||..+++.+|+|||||++... .+ .|.....+||+|+||+||++.+.+|.+..
T Consensus 25 p~~~~~~e~~i~r~dP~~Vi~~~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~~y~I~~A~S~Dgv~W~~~g~~L~~~~~ 104 (349)
T cd08992 25 PKGGLGYEEGVHRRDPSSVIKVDGLYHVWYTKSEGETDGFGTGDPEAKVFPWDKCEIWHATSKDGWTWKEEGPAIGRGEK 104 (349)
T ss_pred cccccccccCeecCCCceEEEECCEEEEEEEecCCcccccccCCccccccCCCceEEEEEECCCCCCceECCccccCCCC
Confidence 4344444444 346998899999999999986431 11 24466789999999999999998886533
Q ss_pred -CcCCCcEEeeeEEEccCCeEEEEEeccCCC----ccceEEEEEEcCCCCCCcceEEEcCCCceecCCC-----------
Q 011094 184 -WYDINGVWTGSATILPDGQIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR----------- 247 (494)
Q Consensus 184 -~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~----~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~----------- 247 (494)
.||..++|..+++ ..+|+++|+|++.... ..+.+++|+|+++. ..|++. .+||+.+..
T Consensus 105 g~Wd~~~vwaP~Vi-~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~----GpWtr~-d~Pil~p~~dg~w~~d~~~~ 178 (349)
T cd08992 105 GAYDDRSVFTPEVL-EHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPY----GPWTKS-DEPILSPSNDGIWKGDEDNR 178 (349)
T ss_pred CCccccceECcEEE-EECCEEEEEEEecccccCCCCcceEEEEEECCcc----cccccC-CCcEecCCcCCceeeccCce
Confidence 5899999999986 5799999999975421 23568999998763 459985 689886521
Q ss_pred -------CCCCCCCCCCeeEeecCCCeEEEEEeeecC--------CeeEEEEEEeCCCC-CCEEc
Q 011094 248 -------HIGPKDFRDPTTAWAGPDGKWRLTIGSKIG--------KTGISLVYQTTDFK-TYELL 296 (494)
Q Consensus 248 -------g~~~~~fRDP~V~w~~~dg~w~MviGa~~~--------~~G~v~lY~S~Dl~-~W~~~ 296 (494)
.++.....||.|+ . .+|+|||++.+... ..-++.|..|+++. -|+..
T Consensus 179 ~~~~~~g~wD~~~v~~P~v~-~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r~ 241 (349)
T cd08992 179 FLVKKKGSFDSHKVHDPCLF-P-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVKS 241 (349)
T ss_pred eEeccCCCcccCceECCEEE-E-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEeC
Confidence 1334456899995 3 58999999965321 11257788898864 46654
|
This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08984 GH43_5 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.6e-13 Score=136.46 Aligned_cols=169 Identities=18% Similarity=0.223 Sum_probs=120.5
Q ss_pred ccCCccceEE--CCEEEEEEee-C---CCC-CCCC-CcEEEEEEecC-ccCeeecceeccCCCCcCCCcEEeeeEEEccC
Q 011094 130 MNDPNGPLFY--KGWYHLFYQY-N---PDS-AVWG-NITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGVWTGSATILPD 200 (494)
Q Consensus 130 mNDPNG~~y~--~G~YHLFYQ~-n---P~~-~~wg-~~~WGHA~S~D-LvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~d 200 (494)
.-||. ++++ +|+|||||.. . |.. ..|. ...+|+|+|+| |+||++++.++.++..+....+|.+.++. .+
T Consensus 11 ~~DP~-i~~~~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~v~~-~~ 88 (294)
T cd08984 11 AADPT-IIYNRETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGGATWTYRGTADGLEFECGRNTFWAPEVVW-HG 88 (294)
T ss_pred CCCCE-EEEeCCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCCCCCEEeeeeccCCCCCcccceeCceEEE-EC
Confidence 78998 8887 7899999942 1 111 2343 25799999999 99999999877665555667799999975 68
Q ss_pred CeEEEEEeccCC-----CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeee
Q 011094 201 GQIVMLYTGSTD-----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (494)
Q Consensus 201 G~~~~~YTG~~~-----~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~ 275 (494)
|+++|||+.... .....+++|+|+|. .+|++.+ ++... .....||.|+ ...+|+|+|++...
T Consensus 89 G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl-----~~w~~~~--~~~~~-----~~~~iD~~vf-~~~dg~~yl~y~~~ 155 (294)
T cd08984 89 GVYHMYVTYIPGVPPDWGGPRRIVHYTSPNL-----WDWTFVG--RVDLD-----SDRVIDACVF-KLPDGRWRMWYKDE 155 (294)
T ss_pred CEEEEEEEecCCCCcccCCCcEEEEEECCCc-----CcceECC--ccccC-----CCCcEEeEEE-EeCCCEEEEEEECC
Confidence 999999997532 12356788999884 7899863 33211 1245799994 44679999999643
Q ss_pred cCCeeEEEEEEeCCCCCCEEcCcccccCCCCCceEeccEEEec
Q 011094 276 IGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318 (494)
Q Consensus 276 ~~~~G~v~lY~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~ 318 (494)
.. ...+.+..|+|+.+|+..+.++.. ..-|+|.+|+.+
T Consensus 156 ~~-~~~~~~a~s~D~~~w~~~~~~i~~----~~~EgP~v~k~~ 193 (294)
T cd08984 156 RR-GSTTYAADSEDLYHWTVEGPVLGD----RPHEGPNVFRWK 193 (294)
T ss_pred CC-CeEEEEEECCCCCEEEeCCccccC----CCCCCCCeeEEC
Confidence 22 224567789999999987655431 134999999874
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >PF11837 DUF3357: Domain of unknown function (DUF3357); InterPro: IPR021792 This entry represents the N-terminal domain of beta-fructofuranosidase, whcih is involved in the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.7e-15 Score=132.05 Aligned_cols=97 Identities=41% Similarity=0.621 Sum_probs=3.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHH-HhhcCCCCCCCCC--CCCCCCCCCCCCCCCCCCccc
Q 011094 14 YPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALI-INQTQKPLPSQNN--IVPTSKPTSFSNPEPRGVAEG 90 (494)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 90 (494)
|+|||+.+.+... ++.++||++|++++|++++++|++||+++ ++.++. +.... .......++...+.|||+++|
T Consensus 7 Y~PLP~~~~~~~~-~~~~~rR~~k~~~~i~~s~~~ll~lval~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~SRGv~~G 83 (106)
T PF11837_consen 7 YTPLPDSSESAPG-PGGRRRRPLKCLAAIFSSLLFLLSLVALIVINNGQS--PDGSSVSSSSPPPSPETATPVSRGVSEG 83 (106)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCCCCcccCC-CCcCcCCcchhHHHHHHHHHHHHHHHHHHHhhccCC--CCccccccCCCCCCCccccCCCCCcccC
Confidence 9999875554332 23456788899999999999999999998 222211 11111 122334445555689999999
Q ss_pred ccccccccccccccCCCcCCcccc
Q 011094 91 VSAKSNSHLLRNIKGSYNWTNAMF 114 (494)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~ 114 (494)
||||++....+. ..+|||+|+||
T Consensus 84 VSEKS~~~~~~~-~~~FpWtNaML 106 (106)
T PF11837_consen 84 VSEKSNGAGSGA-GNSFPWTNAML 106 (106)
T ss_dssp --------------------HHHH
T ss_pred cccccccCccCC-CCCCCCccccC
Confidence 999998874444 67899999996
|
; GO: 0004564 beta-fructofuranosidase activity, 0004575 sucrose alpha-glucosidase activity; PDB: 3UGG_A 3UGH_B 3UGF_B. |
| >cd08985 GH43_6 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.1e-11 Score=124.02 Aligned_cols=197 Identities=18% Similarity=0.110 Sum_probs=131.6
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC----CcCCCcEEeeeEEEcc-CCeEEEE
Q 011094 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ----WYDINGVWTGSATILP-DGQIVML 206 (494)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~----~~D~~Gv~SGSavv~~-dG~~~~~ 206 (494)
|+ ++++++|+|++|--....+.. ....|-..+|+||+||+.++.+|.+.. .....++|.++++..+ +|+++|+
T Consensus 5 ~~-~i~~~~~~yY~ygs~~~~~~~-~~~gi~~~sS~DLvnW~~~g~vl~~~~~~~~~~~~~~~waP~v~y~~~~g~Y~m~ 82 (265)
T cd08985 5 GG-GILKVGGTYYWYGENKGGGDT-AFGGVSCYSSTDLVNWTFEGLALTPEEDSADLGPGRIIERPKVIYNAKTGKYVMW 82 (265)
T ss_pred cC-ceEEECCEEEEEEEecCCCCc-ccccEEEEECCCCccceECceeccccccccccccCcEEECCeEEEeCCCCEEEEE
Confidence 45 488899999999876543211 124578889999999999999997754 3456689999998653 6999999
Q ss_pred EeccCCC-ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEE
Q 011094 207 YTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVY 285 (494)
Q Consensus 207 YTG~~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY 285 (494)
|++...+ ....+++|+|++.. ..|+... .+. +.+ ...|||.++ .++||++||++++..+. + +.+.
T Consensus 83 ~~~~~~~~~~~~igvA~Sd~p~----Gpf~~~~-~~~---~~~---~~~~Dp~vf-~DdDG~~Yl~~~~~~~~-~-i~i~ 148 (265)
T cd08985 83 MHIDSSDYSDARVGVATSDTPT----GPYTYLG-SFR---PLG---YQSRDFGLF-VDDDGTAYLLYSDRDNS-D-LYIY 148 (265)
T ss_pred EEeCCCCCcceeEEEEEeCCCC----CCCEECC-ccC---CCC---CCccCCceE-EcCCCCEEEEEecCCCC-c-eEEE
Confidence 9986432 34678899998753 5677642 221 222 357999995 46789999999975322 2 3344
Q ss_pred E-eCCCCCCEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCC---CceeEEEEEEecCCCCc
Q 011094 286 Q-TTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD---TKVDHYAIGTYNPANDK 361 (494)
Q Consensus 286 ~-S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~---~~~~~Y~iG~~d~~~~~ 361 (494)
+ ++|+..+.-. ... .......|||.+|+.+ .+++|..|... .....|++.+ ...+.
T Consensus 149 ~L~~d~~~~~~~--~~~-~~~~~~~EaP~i~K~~---------------g~YYL~~S~~t~~~~~~~~y~~s~--s~~GP 208 (265)
T cd08985 149 RLTDDYLSVTGE--VTT-VFVGAGREAPAIFKRN---------------GKYYLLTSGLTGWNPNDARYATAT--SILGP 208 (265)
T ss_pred EeCCCcccccce--EEE-ccCCCccccceEEEEC---------------CEEEEEEccCCCccCCceEEEEec--CCCCC
Confidence 4 4687777532 221 1123478999999985 26777777532 2345677665 22456
Q ss_pred ccC
Q 011094 362 WTP 364 (494)
Q Consensus 362 f~p 364 (494)
|+.
T Consensus 209 ~~~ 211 (265)
T cd08985 209 WTD 211 (265)
T ss_pred ccc
Confidence 663
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Probab=99.40 E-value=8.3e-12 Score=123.17 Aligned_cols=158 Identities=21% Similarity=0.267 Sum_probs=109.2
Q ss_pred CcCCccccccccceeee--ecC----CCcccCCccceEEC-CEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceec
Q 011094 107 YNWTNAMFTWQRTSFHF--QPE----KNWMNDPNGPLFYK-GWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM 179 (494)
Q Consensus 107 ~~~~~~~~~w~Rp~~Hf--~P~----~gwmNDPNG~~y~~-G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL 179 (494)
+..++....|.|..--+ .|. .+.+-||. +++.+ |+|||||..+... ......+++|+|+|++||+..+..+
T Consensus 37 ~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~-v~~~~dg~~~~~Yt~~~~~-~~~~~~i~~A~S~D~~~w~~~~~~~ 114 (276)
T cd08979 37 AASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPS-VVRDPDGTYRMFYTGYDRP-KGAVQRIGLATSKDLIHWTKHGPNP 114 (276)
T ss_pred EEEcCCCCccEECCcCccCCCCCchhcCCeEcce-EEEcCCCeEEEEEecccCC-CCCcceEEEEECCCCCceEECCCCc
Confidence 34455566676655433 222 24466887 66777 9999999976432 2335789999999999999987554
Q ss_pred c-------CCCCcCCCcEEeeeEEEccC-CeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCC
Q 011094 180 V-------PDQWYDINGVWTGSATILPD-GQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGP 251 (494)
Q Consensus 180 ~-------Pd~~~D~~Gv~SGSavv~~d-G~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~ 251 (494)
. +...++...+.+++++.+++ |+++|+|++........+.+|.|.|+ ++|++....+ ....+...
T Consensus 115 ~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~~~i~~a~S~D~-----~~W~~~~~~~--~~~~~~~~ 187 (276)
T cd08979 115 VPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADERGAIGLATSPDL-----IHWTPVPPPP--GPRTGYDD 187 (276)
T ss_pred ceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCCcEEEEEECCCC-----CcceECCCCC--CCCCcccC
Confidence 2 22334556788999876544 89999999976545577889999885 8999874332 11222334
Q ss_pred CCCCCCeeEeecCCCeEEEEEeee
Q 011094 252 KDFRDPTTAWAGPDGKWRLTIGSK 275 (494)
Q Consensus 252 ~~fRDP~V~w~~~dg~w~MviGa~ 275 (494)
..+.+|.++ + .+|+|+|++++.
T Consensus 188 ~~~e~P~~~-~-~~g~~~l~~~~~ 209 (276)
T cd08979 188 GQLEVPQVV-K-IDGRWYLLYSGR 209 (276)
T ss_pred CcCccceEE-E-ECCEEEEEEEec
Confidence 577899994 4 569999999875
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta |
| >PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.8e-11 Score=119.62 Aligned_cols=183 Identities=20% Similarity=0.178 Sum_probs=125.9
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcC--CCcE-EeeeEEEccCCeEE
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYD--INGV-WTGSATILPDGQIV 204 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D--~~Gv-~SGSavv~~dG~~~ 204 (494)
+..-||. ++..+|.|+||+...... ..+..++|+||+||+..+.++.+....+ ..+. |.++++ ..+|+++
T Consensus 8 ~~~~DP~-i~~~~~~yY~~~t~~~~~-----~~i~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~-~~~g~yy 80 (286)
T PF04616_consen 8 GDYADPS-IVRFGDGYYLYGTTDPEG-----PGIPVWSSKDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIH-YINGKYY 80 (286)
T ss_dssp SSECSEE-EEEETTEEEEEEEEBTCE-----SBEEEEEESSSSSEEEEEECESSTTTTSTTTSETTEEEEEE-EETTEEE
T ss_pred CCCCCCE-EEEECCEEEEEEEcCCCC-----CeEEEEECCCCcccccceeeecccccccccccccccCCeEE-EcCCeEE
Confidence 5678998 888999999999876543 4578999999999999998876654322 3333 999987 4799999
Q ss_pred EEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCC--eeEE
Q 011094 205 MLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK--TGIS 282 (494)
Q Consensus 205 ~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~--~G~v 282 (494)
|+|+.........+.+|+|++.. ..|+... ...+. .....||.++ .+++|++||+.+..... .+.+
T Consensus 81 ~y~~~~~~~~~~~~~va~a~~~~----Gp~~~~~-~~~~~------~~~~iD~~vf-~d~dG~~Yl~~~~~~~~~~~~~i 148 (286)
T PF04616_consen 81 MYYSDSGGDAGSGIGVATADSPD----GPWTDPG-KIPIP------GGNSIDPSVF-VDDDGKYYLYYGSWDNGDPGGGI 148 (286)
T ss_dssp EEEEEESTSTTEEEEEEEESSTT----S-EEEEE-EEEEE------SSSSSSEEEE-EETTSEEEEEEEESTTTSSEEEE
T ss_pred EEEEccCCCCCcceeEEEeCCcc----ccccccc-ceeec------cccccCceEE-EecCCCcEEeCcccCCCccceeE
Confidence 99993333345668899998763 6888753 22222 2355799995 45679999999986432 3344
Q ss_pred EEEE-eCCCCCCEEcC-ccc-ccC--CCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCC
Q 011094 283 LVYQ-TTDFKTYELLD-EYL-HAV--PGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (494)
Q Consensus 283 ~lY~-S~Dl~~W~~~~-~ll-~~~--~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~ 344 (494)
.+.+ +.|...+.... ... ... ......|+|.+|+.++ +++|..|...
T Consensus 149 ~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~g---------------~yYl~~s~~~ 200 (286)
T PF04616_consen 149 YIAELDPDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHGG---------------KYYLFYSAGG 200 (286)
T ss_dssp EEEEEETTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEETT---------------EEEEEEEESG
T ss_pred EeecccCccccccCcccccccccccccCCccccceEEEEcCC---------------CEEEEEeccC
Confidence 4444 56777776554 222 211 2345899999999852 6777777543
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B .... |
| >cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.5e-11 Score=119.91 Aligned_cols=168 Identities=21% Similarity=0.206 Sum_probs=109.3
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC--c----CCCcEEeeeEEEccCC
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW--Y----DINGVWTGSATILPDG 201 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~--~----D~~Gv~SGSavv~~dG 201 (494)
+.+-||. ++.++|+|+||...... ...+..++|+||+||++++.+|.+... + ...++|.+.++. .+|
T Consensus 6 ~~~~DP~-i~~~~~~yy~~~t~~~~-----~~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g 78 (288)
T cd09000 6 GFYPDPS-ICRVGDDYYLVTSSFEY-----FPGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAPTIRY-HDG 78 (288)
T ss_pred CCCCCCC-EEEECCEEEEEECCccc-----CCCceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcceEEE-ECC
Confidence 4678998 88899999998532211 234789999999999999988754321 1 346799999975 699
Q ss_pred eEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecC----
Q 011094 202 QIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG---- 277 (494)
Q Consensus 202 ~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~---- 277 (494)
+++|+|++........+.+|++++.. ..|+. |++.. ...+||.+++ +++|++||+.++...
T Consensus 79 ~yy~yy~~~~~~~~~~~~v~~s~~p~----gpw~~----~~~~~------~~~iDp~vf~-d~dG~~Y~~~~~~~~~~~~ 143 (288)
T cd09000 79 TFYLITTNVDGMKDGGNFIVTADDPA----GPWSD----PVWLD------SGGIDPSLFF-DDDGKVYLVGNGWDERRGY 143 (288)
T ss_pred EEEEEEEecCCCCCCceEEEEeCCCC----CCCcC----CEecC------CCccCCceeE-cCCCCEEEEecccCCcccc
Confidence 99999998754333456788887753 45652 33221 1568999954 578999999886421
Q ss_pred -CeeEEEEEEeCCCCCCEEcCcc--cccCCCCCceEeccEEEec
Q 011094 278 -KTGISLVYQTTDFKTYELLDEY--LHAVPGTGMWECVDFYPVA 318 (494)
Q Consensus 278 -~~G~v~lY~S~Dl~~W~~~~~l--l~~~~~~gmwECPdlf~l~ 318 (494)
..+.+.+.+. |...|+..+.. +.........|+|.+|+.+
T Consensus 144 ~~~~~i~~~~l-~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~ 186 (288)
T cd09000 144 NGHGGIWLQEI-DLETGKLLGEPKVIWNGTGGRWPEGPHLYKRD 186 (288)
T ss_pred CCCCcEEEEEE-ccccCCCCCCcEEEEeCCCCCCcccCeEEEEC
Confidence 1233434433 33444443322 1111112468999999875
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd09003 GH43_AXH_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.4e-10 Score=118.93 Aligned_cols=186 Identities=13% Similarity=0.220 Sum_probs=121.6
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCC---------CCCCcEEEEEEecCccCeeecceeccC--CCCcCCCcEEeeeEE
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSA---------VWGNITWGHAVSADLIHWLYLPIAMVP--DQWYDINGVWTGSAT 196 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~---------~wg~~~WGHA~S~DLvhW~~~p~AL~P--d~~~D~~Gv~SGSav 196 (494)
.+.-||. ++.++|+|+||....-... .+....+--.+|+||+||+.++.++.| ...| ..++|.++++
T Consensus 7 ~~~aDP~-~~~~~g~yY~~~t~~~~~~~~~~~~~~~~~~~~~i~v~~S~DL~~W~~~g~v~~~~~~~~w-~~~~WAP~v~ 84 (311)
T cd09003 7 RYGADPT-AVVYNGRVYVYTTNDDYEYDSNTIKDNNYYNINDITVISSDDMVNWTDHGEIFVPNGIAKW-AGNSWAPSIA 84 (311)
T ss_pred CccCCCC-eEEECCEEEEEeCCCCccccccccccCCccccCcEEEEECCCCCCcEEcccccCcCCCCCc-ccccCCCceE
Confidence 4668998 6788999999987643221 122245778899999999999988863 2234 3478999997
Q ss_pred EccC----CeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCC-CCCCCCC-CCCCeeEeecCCCeEEE
Q 011094 197 ILPD----GQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP-RHIGPKD-FRDPTTAWAGPDGKWRL 270 (494)
Q Consensus 197 v~~d----G~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p-~g~~~~~-fRDP~V~w~~~dg~w~M 270 (494)
. .+ |+++|+|+.. ...+++|+|+++. ..|+...+.|++... ++..... -.||.+++ ++||++||
T Consensus 85 ~-~~~~~~gkyylyy~~~----~~~igva~SdsP~----GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~-DdDG~~Yl 154 (311)
T cd09003 85 V-KKINGKGKFYLYFANG----GGGIGVLTADSPV----GPWTDPLGKPLITGSTPGCAGVVWLFDPAVFV-DDDGQGYL 154 (311)
T ss_pred E-eccCCCCEEEEEEecC----CCeEEEEEcCCCC----CCcccCCCCeeecCCCCCccCCccccCCCeEE-CCCCCEEE
Confidence 5 56 9999999864 2347899987753 679875456776532 2322122 36999954 57899999
Q ss_pred EEeeecC-----CeeEEEEEE-eCCCCCCEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeC
Q 011094 271 TIGSKIG-----KTGISLVYQ-TTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (494)
Q Consensus 271 viGa~~~-----~~G~v~lY~-S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~ 343 (494)
+.|+... ..+.+.+.+ ++|+..-. ++... ......+|.|.+++.+ .+++|..|..
T Consensus 155 ~~g~~~~~~~~~~~~~i~i~~l~~D~~~~~--g~~~~-i~~~~~~Egp~~~K~~---------------G~YYL~ys~~ 215 (311)
T cd09003 155 YFGGGVPGGRWANPNTARVIKLGDDMISVD--GSAVT-IDAPYFFEASGLHKIN---------------GTYYYSYCTN 215 (311)
T ss_pred EECCccCCCccccCCCEEEEEeCCCceecc--CCceE-ccCCCceEeeeEEEEC---------------CEEEEEEeCC
Confidence 9986321 112334444 45665432 22211 1112479999999875 2677777653
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose |
| >PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety | Back alignment and domain information |
|---|
Probab=99.32 E-value=9.3e-12 Score=127.83 Aligned_cols=159 Identities=23% Similarity=0.247 Sum_probs=109.5
Q ss_pred cceEECCE--EEEEEeeCCCCCCCCCcEEEEEEecCccCeeecc-eeccCCCCcCCCcEEeeeEEEccCCeEEEEEeccC
Q 011094 135 GPLFYKGW--YHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP-IAMVPDQWYDINGVWTGSATILPDGQIVMLYTGST 211 (494)
Q Consensus 135 G~~y~~G~--YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p-~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~ 211 (494)
|++.++|. |||+|...-.. .+..+.|.|.|+|.+||+..+ +.|.|+..|+..||....++. .+|+++|+||+..
T Consensus 36 gai~~~~~~R~~l~yr~~~~~--~~~~~iglA~S~DGi~f~~~~~pil~P~~~~e~~GvEDPRVt~-i~d~yymtYta~~ 112 (312)
T PF04041_consen 36 GAIVFDGGLRVYLLYRAYGSD--IGSSRIGLARSDDGIHFERDPEPILYPDTDYEEWGVEDPRVTK-IDDTYYMTYTAYS 112 (312)
T ss_dssp EEEEETTE--EEEEEEEEESS--SSEEEEEEEEESSSSS-EE-SS-SBEE-SSTTHTEEEEEEEEE-ETTEEEEEEEEEE
T ss_pred cEEEECCeeEEEEEEEeECCC--CceeEEEEEEccCCcCceECCCCEEccCCCCcccCccceeEEE-ECCEEEEEEEEec
Confidence 45655665 89988654321 223479999999999999887 789999999999999999985 6899999999987
Q ss_pred CCccceEEEEEEcCCCCCCcceEEEcCCCceecCCC---CCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEEeC
Q 011094 212 DKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR---HIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTT 288 (494)
Q Consensus 212 ~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~---g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~ 288 (494)
..+ ..+++|.|+|. .+|+|.. +++.... ......-+|-..|-...+|+|+|+.+ .+.+.+..|+
T Consensus 113 ~~~-~~~~la~s~D~-----~~~~r~g--~~~~~~~~~~~~~~~~~kd~~lfp~ki~Gky~m~~r-----~~~i~la~S~ 179 (312)
T PF04041_consen 113 GKG-PRIGLATSKDF-----KHWERHG--KIFPPFNGNEDYRDFWSKDGALFPEKINGKYAMLHR-----DPSIWLAYSP 179 (312)
T ss_dssp SSS-EEEEEEEESSS-----SSEEEEE--CTTTTTCTS-EEEEEEEECCEEEESEETTEEEEEEE-----SSSBEEEEES
T ss_pred CCC-cccceEEccch-----HhhEEec--cccCcccccccccccccCceEEEEEEECCEEEEEEC-----CCCEEEEecC
Confidence 644 56899999995 9999984 2222111 00011125555532246899999988 3457788999
Q ss_pred CCCCCEEcCc-ccccCCCCCceEe
Q 011094 289 DFKTYELLDE-YLHAVPGTGMWEC 311 (494)
Q Consensus 289 Dl~~W~~~~~-ll~~~~~~gmwEC 311 (494)
|+++|+.... ++.. ..++||+
T Consensus 180 Dl~~W~~~~~~~~~~--~~~~~d~ 201 (312)
T PF04041_consen 180 DLIHWGNHREPLLSP--RPGWWDS 201 (312)
T ss_dssp SSSSEEEEBETSB----STTSSCS
T ss_pred CcccccccccccccC--CCCcChh
Confidence 9999987665 4332 2356777
|
On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B. |
| >cd08983 GH43_4 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.4e-10 Score=114.23 Aligned_cols=182 Identities=13% Similarity=0.072 Sum_probs=120.4
Q ss_pred CCcccCCccceEE--CCEEEEEEeeCCCCCCC-CCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEcc-CCe
Q 011094 127 KNWMNDPNGPLFY--KGWYHLFYQYNPDSAVW-GNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILP-DGQ 202 (494)
Q Consensus 127 ~gwmNDPNG~~y~--~G~YHLFYQ~nP~~~~w-g~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~-dG~ 202 (494)
.+-+.||. ++.. +|+||||+...-....+ +.....+++|+||+||+..+.++.... ...++|...++.++ +|+
T Consensus 15 ~~~~rDP~-I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~--~~~~~WAPev~~d~~~g~ 91 (276)
T cd08983 15 TKGLRDPF-ILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPP--NAGNTWAPEAFWDAERGQ 91 (276)
T ss_pred CCCccCCe-EEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCC--CcCcEeCccceEcCCCCe
Confidence 35567998 7776 89999999754321112 346789999999999999887653221 24578999998765 799
Q ss_pred EEEEEeccCCC-----ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecC
Q 011094 203 IVMLYTGSTDK-----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG 277 (494)
Q Consensus 203 ~~~~YTG~~~~-----~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~ 277 (494)
++|+|+..... ....+..|.+.| +.+|+.. .+++. ++ ....|+.++ . .+|+|||++....+
T Consensus 92 y~~~~s~~~~~~~~~~~~~~i~~~tt~D-----f~tft~p--~~~~~--~~---~~~ID~~v~-~-~~g~~Yl~~k~~~~ 157 (276)
T cd08983 92 YVVYWSSRLYDNTGGFYNYRLYATTTSD-----FVTFTEP--KVWID--LG---ANVIDTTVV-K-VGGTYYRFYKNEGS 157 (276)
T ss_pred EEEEEecccCCCCCCCccEEEEEEecCc-----ccccCCC--eEeec--CC---CCeEeeEEE-E-eCCEEEEEEecCCC
Confidence 99999987542 122233344335 3788752 45554 22 356799985 4 35999999865322
Q ss_pred CeeEEEEEEeCCCC-CCEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeee
Q 011094 278 KTGISLVYQTTDFK-TYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASL 342 (494)
Q Consensus 278 ~~G~v~lY~S~Dl~-~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~ 342 (494)
+.+.+.+|+++. .|+...... .......|-|.+|+..+. .+|+|..+.
T Consensus 158 --~~i~~~~s~~l~g~~~~~~~~~--~~~~~~~EgP~v~k~~~~-------------~~y~L~~d~ 206 (276)
T cd08983 158 --KDIELARSKSLTGPWTIVGTGD--AGWGGAVEGPTVFKLNNG-------------GGWYLYGDN 206 (276)
T ss_pred --CcEEEEEeCCCCCCceEecccc--cCCCCceeCCeEEEECCC-------------CEEEEEEEE
Confidence 446677899876 676654321 112236899999999631 367777654
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins | Back alignment and domain information |
|---|
Probab=99.25 E-value=5.7e-10 Score=115.96 Aligned_cols=190 Identities=18% Similarity=0.214 Sum_probs=122.3
Q ss_pred cCCccccccccceeeeecC-CC-c----ccCCccceEECCEEEEEEeeCCC-CCCCCCcEEEEEEecCcc-Ceeecc-ee
Q 011094 108 NWTNAMFTWQRTSFHFQPE-KN-W----MNDPNGPLFYKGWYHLFYQYNPD-SAVWGNITWGHAVSADLI-HWLYLP-IA 178 (494)
Q Consensus 108 ~~~~~~~~w~Rp~~Hf~P~-~g-w----mNDPNG~~y~~G~YHLFYQ~nP~-~~~wg~~~WGHA~S~DLv-hW~~~p-~A 178 (494)
..+.....|+|-..=|.+. .+ | +.-|. +++++|+|||||+..-. ...-.+...|.|+|+|.. .|+++. +.
T Consensus 84 A~S~Dgv~W~~~g~~L~~~~~g~Wd~~~vwaP~-Vi~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~Pi 162 (349)
T cd08992 84 ATSKDGWTWKEEGPAIGRGEKGAYDDRSVFTPE-VLEHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDEPI 162 (349)
T ss_pred EECCCCCCceECCccccCCCCCCccccceECcE-EEEECCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCCcE
Confidence 3344556787766333221 21 2 34575 77889999999985321 111123567888888876 698765 45
Q ss_pred ccCCC------------------CcCCCcEEeeeEEEccCCeEEEEEeccCC-------CccceEEEEEEcCCCCCCcce
Q 011094 179 MVPDQ------------------WYDINGVWTGSATILPDGQIVMLYTGSTD-------KSVQVQNLAYPADPSDPLLLD 233 (494)
Q Consensus 179 L~Pd~------------------~~D~~Gv~SGSavv~~dG~~~~~YTG~~~-------~~~q~q~lA~S~D~~d~lL~~ 233 (494)
|.|+. .||..+|...+++ ..+|+++|||+|+.. ...+.+++|+|+++. .-
T Consensus 163 l~p~~dg~w~~d~~~~~~~~~~g~wD~~~v~~P~v~-~~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~----GP 237 (349)
T cd08992 163 LSPSNDGIWKGDEDNRFLVKKKGSFDSHKVHDPCLF-PFNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPE----GP 237 (349)
T ss_pred ecCCcCCceeeccCceeEeccCCCcccCceECCEEE-EECCEEEEEEEccccCcccccCCCCceEEEEEECCCC----CC
Confidence 65642 2566777777765 579999999999752 134678999998874 67
Q ss_pred EEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeE-EEEEeeecCCeeEEEEEEeCCCCCCEEcCcccccCCCCCceEec
Q 011094 234 WVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKW-RLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECV 312 (494)
Q Consensus 234 W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w-~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~~~~~~gmwECP 312 (494)
|+|.+.|||+..- + ..+| |.. .+.+ .|+..-. .+.|. +..|+|.++|+....+-......|..+||
T Consensus 238 f~r~~~nPi~~~~------~--~~~~-~~~-~~~~~~~~~~d~-~~~~~--~~~~~dg~~~~~~~~~~~~~~~~~~~~~~ 304 (349)
T cd08992 238 YVKSPYNPITNSG------H--ETCV-WQY-KGGIAAMLTTDG-PEKNT--IQFAPDGINFEIMAHIKGAPEAIGPYRRP 304 (349)
T ss_pred CEeCCCCcccCCC------C--ceEE-Eec-CCceEEEEeccC-CCCce--EEeCCCCccEEEeeeccCCCccccCccCc
Confidence 9999899997531 2 2477 974 4556 5554432 23354 56799999999876554322234556677
Q ss_pred cEEE
Q 011094 313 DFYP 316 (494)
Q Consensus 313 dlf~ 316 (494)
|-+.
T Consensus 305 ~~~~ 308 (349)
T cd08992 305 DADE 308 (349)
T ss_pred cccc
Confidence 6544
|
This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08981 GH43_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.2e-09 Score=111.04 Aligned_cols=135 Identities=19% Similarity=0.169 Sum_probs=94.3
Q ss_pred CcccCCccceEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC-CcCCCcEEeeeEEEccCCeEE
Q 011094 128 NWMNDPNGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ-WYDINGVWTGSATILPDGQIV 204 (494)
Q Consensus 128 gwmNDPNG~~y~--~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~-~~D~~Gv~SGSavv~~dG~~~ 204 (494)
.++-||. ++++ +|+||||..............+.+.+|+||+||+..+.++.+.. .+...++|...++ ..+|+++
T Consensus 4 ~~~~DP~-v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~-~~~G~yy 81 (291)
T cd08981 4 IRIRDPF-ILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVH-EYKGRYY 81 (291)
T ss_pred ccccCCE-EEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeee-eeCCEEE
Confidence 4578997 7787 99999999754322101123579999999999999998886543 3445689999986 5799999
Q ss_pred EEEeccCCC-ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEee
Q 011094 205 MLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (494)
Q Consensus 205 ~~YTG~~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa 274 (494)
|+|+..... ....+.+|++++.. ..|+.....|+... + ....||.+ |.++||++||+.+.
T Consensus 82 ly~s~~~~~~~~~~~~va~s~~p~----GP~~~~~~~~~~~~--~---~~~iDp~~-f~DdDG~~Yl~~~~ 142 (291)
T cd08981 82 MFATFHNPGGERRGTAILVSDSPE----GPFVPHSDGPVTPE--D---WMCLDGTL-YVDEDGKPWMVFCH 142 (291)
T ss_pred EEEEeccCCCceeeEEEEECCCCC----CCCEeCCCCccCCC--C---CceEcCce-EEcCCCCEEEEEEe
Confidence 999876433 22346788887652 56887543444221 1 23479998 45678999999874
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08988 GH43_ABN Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.15 E-value=3e-09 Score=107.12 Aligned_cols=169 Identities=18% Similarity=0.194 Sum_probs=105.7
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCc-------CCCcEEeeeEEEccCCeEE
Q 011094 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWY-------DINGVWTGSATILPDGQIV 204 (494)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~-------D~~Gv~SGSavv~~dG~~~ 204 (494)
||. ++.++|+|+||.... .+..++|+||+||+..+.+|.+...+ ...++|...++. .+|+++
T Consensus 2 DP~-vi~~~~~YY~~~T~~---------g~~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~yy 70 (279)
T cd08988 2 DPV-IIKEGDTWYVFGTGP---------GITILSSKDLVNWTYSGSAFATEPTWKKRVPPSFDGHLWAPDIYQ-HNGKFY 70 (279)
T ss_pred CCE-EEEECCEEEEEEecC---------CEEEEECCCcCCccccCccccCCCccccccCCCCCCCEecceEEE-ECCEEE
Confidence 897 788899999987531 36789999999999999888543322 246899999864 689999
Q ss_pred EEEeccCCC-ccceEEEEEEcCCCCCC-cceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEE
Q 011094 205 MLYTGSTDK-SVQVQNLAYPADPSDPL-LLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGIS 282 (494)
Q Consensus 205 ~~YTG~~~~-~~q~q~lA~S~D~~d~l-L~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v 282 (494)
|||++.... ..+.+++|+|++...|- -..|++ ..+++..... ....-.||.+++ ++||++||+.|+.. .|+
T Consensus 71 lyys~~~~~~~~~~igva~s~~p~Gp~~~~~w~~--~~~i~~~~~~-~~~~~iDp~~f~-DdDG~~Yl~~g~~~--~gi- 143 (279)
T cd08988 71 LYYSVSAFGSNTSAIGLAVNKTIDGPSPDYGWEK--GGVVISSDAS-DNYNAIDPAIIF-DQHGQPWLSFGSFW--GGI- 143 (279)
T ss_pred EEEEeccCCCCCceEEEEEcCCCCCCCcCcCccc--cCceEecCCC-CCCCccCCceEE-cCCCCEEEEecccC--CCE-
Confidence 999986532 24677899998764220 012443 2455543211 112347999955 57899999998632 232
Q ss_pred EEEE-eCCCCCCEEcCc---ccccCCCCCceEeccEEEec
Q 011094 283 LVYQ-TTDFKTYELLDE---YLHAVPGTGMWECVDFYPVA 318 (494)
Q Consensus 283 ~lY~-S~Dl~~W~~~~~---ll~~~~~~gmwECPdlf~l~ 318 (494)
.+.+ +.|...-...+. +..........|-|-+++-+
T Consensus 144 ~~~eL~~d~~~~~~~~~~~~i~~~~~~~~~~Egp~i~k~~ 183 (279)
T cd08988 144 KLFELDKDTMKPAEPGELHSIAGRERSSAAIEAPFILYRG 183 (279)
T ss_pred EEEEECcccCCccCCCcceEEeccCCCCCceEeeEEEEcC
Confidence 2222 445443211111 11111112367999998874
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla |
| >cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.4e-08 Score=101.78 Aligned_cols=125 Identities=18% Similarity=0.141 Sum_probs=88.3
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCc------CCCcEEeeeEEEccCC
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWY------DINGVWTGSATILPDG 201 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~------D~~Gv~SGSavv~~dG 201 (494)
+..-||. ++.++|.|+||+..... .......+|+||+||+..+.++...... ...++|...++. .+|
T Consensus 6 ~~~~DP~-ii~~~~~yY~~~t~~~~-----~~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G 78 (269)
T cd08989 6 GDNPDPS-IIRAGDDYYMASSTFEW-----FPGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIWAPCLSY-YDG 78 (269)
T ss_pred CCCCCCc-EEEECCeEEEEECcccc-----CCCcEEEECCccCCCEEccccccCccccccccCCCCCcEEcceEEE-ECC
Confidence 5567998 88899999999853211 1235678999999999988776542211 245799999864 799
Q ss_pred eEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEee
Q 011094 202 QIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (494)
Q Consensus 202 ~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa 274 (494)
+++|+|+.........+.+|++++.. ..|+. |+... ..-.||.++ .++||+.||+.|+
T Consensus 79 ~yy~yy~~~~~~~~~~i~va~sd~~~----Gpw~~----~~~~~------~~~IDp~~f-~D~dG~~Yl~~~~ 136 (269)
T cd08989 79 KFWLIYTAVKVWKDCHNYLFTAEDIT----GPWSR----PIFLN------YGGFDPSLF-HDDDGKKYLINMG 136 (269)
T ss_pred EEEEEEeccccCCCceEEEEEECCCC----CCCcC----CEECC------CCcccCceE-EcCCCCEEEEecC
Confidence 99999998754334567889887653 34653 33321 134799995 4579999999875
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended |
| >cd08980 GH43_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.99 E-value=3.1e-08 Score=99.88 Aligned_cols=190 Identities=14% Similarity=0.091 Sum_probs=115.9
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceec--cCCCC-cCCCcEEeeeEEEccCCeEEEEEe
Q 011094 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM--VPDQW-YDINGVWTGSATILPDGQIVMLYT 208 (494)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL--~Pd~~-~D~~Gv~SGSavv~~dG~~~~~YT 208 (494)
||. ++.+++.|+||+.-.. .....++|+||+||+.....+ .+... ....++|...+.. .+|+++|+|+
T Consensus 2 DP~-v~~~~d~yY~~~T~~~-------~~~~i~~S~dl~~w~~~~~~~~~~~~~~~~~~~~~WAP~i~~-~~g~yylyys 72 (288)
T cd08980 2 DPW-VIRHDGYYYFTATTGE-------DRIELRRSDTLAGLATAESKVVWTPPDSGPYSGNLWAPELHY-IDGKWYIYFA 72 (288)
T ss_pred CCe-EEEECCEEEEEEEeCC-------CcEEEEecCChhHhhcCCcEEEecCCCCCCccccEECceEEE-ECCEEEEEEE
Confidence 897 7888899999986331 347889999999999875332 23221 3456899999864 7999999999
Q ss_pred ccCC--CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecC---CeeEEE
Q 011094 209 GSTD--KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG---KTGISL 283 (494)
Q Consensus 209 G~~~--~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~---~~G~v~ 283 (494)
.... ...+.+++|.+++..++ +..|+.. .+++... + ..-.||.++ .+ +|++||+++.... ....+.
T Consensus 73 ~~~~~~~~~~~~~v~~a~~~~~~-~Gpw~~~--~~~~~~~-~---~~~iDp~~~-~d-dG~~Yl~~~~~~~~~~~~~~i~ 143 (288)
T cd08980 73 AGDGGGNANHRMYVLENAGADPP-TGPWTFK--GRLADPT-D---RWAIDGTVF-EH-NGQLYFVWSGWEGRTNGNQNLY 143 (288)
T ss_pred ccCCCCCcceeEEEEEeCCCCCC-CCCceEe--eEeccCC-C---CeeeeeEEE-EE-CCEEEEEEEccCCCCCCCccEE
Confidence 8754 23456678887753223 3689874 3443211 1 123699995 43 5999999875421 122344
Q ss_pred EEEeCCCCCCEEcCcccccCC------CCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCCceeEEEEEE
Q 011094 284 VYQTTDFKTYELLDEYLHAVP------GTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGT 354 (494)
Q Consensus 284 lY~S~Dl~~W~~~~~ll~~~~------~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~~~~~Y~iG~ 354 (494)
+.+.++...+.-....+.... +....|-|.+++.+ .+++|..|........|.+|-
T Consensus 144 ~~~l~~~~~~~g~~~~i~~p~~~we~~~~~~~EgP~~~k~~---------------G~yYl~yS~~~~~~~~Y~v~~ 205 (288)
T cd08980 144 IAKMSNPWTLTGPRVLISRPEYDWERQGPGVNEGPAALKRN---------------GKVFLTYSASGSWTPDYCLGL 205 (288)
T ss_pred EEECCCCCccCCcceEecCCCCCceecCceeeECcEEEEEC---------------CEEEEEEECCCCCCCCCEEEE
Confidence 455444333321111111110 11356888888875 267777776544344566654
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.4e-08 Score=98.26 Aligned_cols=159 Identities=17% Similarity=0.140 Sum_probs=102.8
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC-----------cCCCcEEeeeEE
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW-----------YDINGVWTGSAT 196 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~-----------~D~~Gv~SGSav 196 (494)
+..-||. +++++|+|++|....-. ...+...+|+||+||+..+.++..... .-..++|...++
T Consensus 9 ~~~~DP~-v~~~~~~yY~~~t~~~~-----~~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v~ 82 (269)
T cd09001 9 ADYPDPD-VIRVGDDYYMVSTTMHY-----SPGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAYGKGQWAPSLR 82 (269)
T ss_pred CCCCCCe-EEEECCEEEEEECCccc-----CCCCEEEEcccccCCeEcccccccccccccccccccCCCCCCCEECCceE
Confidence 4557998 88889999999864211 123567899999999999877643211 013579999986
Q ss_pred EccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec
Q 011094 197 ILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI 276 (494)
Q Consensus 197 v~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~ 276 (494)
. .+|+++|+|+... ..+.+|++++.. ..|+.. .++ ....||.+++ ++||+.||+.++.
T Consensus 83 ~-~~gkyy~yys~~~----~~~~v~~a~~p~----Gpw~~~--~~~---------~~~iDp~~f~-D~dG~~Yl~~~~~- 140 (269)
T cd09001 83 Y-HNGTFYVFFCTNT----GGTYIYTADDPE----GPWTKT--ALD---------GGYHDPSLLF-DDDGTAYLVYGGG- 140 (269)
T ss_pred E-ECCEEEEEEEecC----CCeEEEEcCCCC----CCCcCC--CcC---------CCcccCceEE-cCCCCEEEEeCCC-
Confidence 5 6999999999862 346788887642 456543 111 1457999954 5789999998753
Q ss_pred CCeeEEEEEE-eCCCCCCEEcC-cccccCC-CCCceEeccEEEec
Q 011094 277 GKTGISLVYQ-TTDFKTYELLD-EYLHAVP-GTGMWECVDFYPVA 318 (494)
Q Consensus 277 ~~~G~v~lY~-S~Dl~~W~~~~-~ll~~~~-~~gmwECPdlf~l~ 318 (494)
+ +.+.+ +.|+....-.. .++.... .....|-|.+++-+
T Consensus 141 ---~-i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~ 181 (269)
T cd09001 141 ---T-IRLVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKIN 181 (269)
T ss_pred ---c-EEEEEECcccCCcCCCceEEEeCCCccccccccCeEEEEC
Confidence 2 22333 56766652111 1222111 12467999999764
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd08986 GH43_7 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.91 E-value=5.7e-08 Score=97.54 Aligned_cols=168 Identities=17% Similarity=0.123 Sum_probs=103.0
Q ss_pred cccCCccceEE-CCEEEEEEeeCCCCC----CC-CCcEEEEEEecCccCeeecceeccCCCC------------cCCCcE
Q 011094 129 WMNDPNGPLFY-KGWYHLFYQYNPDSA----VW-GNITWGHAVSADLIHWLYLPIAMVPDQW------------YDINGV 190 (494)
Q Consensus 129 wmNDPNG~~y~-~G~YHLFYQ~nP~~~----~w-g~~~WGHA~S~DLvhW~~~p~AL~Pd~~------------~D~~Gv 190 (494)
||-||. ++.. +|+|+|+......+. .| .....-.++|+||+||+..+.++..... ....++
T Consensus 1 ~~rDP~-v~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 79 (269)
T cd08986 1 WIRDTY-VTLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAV 79 (269)
T ss_pred CCcCCe-EEecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCc
Confidence 688998 5655 679999987442211 01 1234668999999999999877754321 235679
Q ss_pred EeeeEEEccCCeEEEEEeccCCC-ccceEEEEEEcCCCCCCcceEEEcCCC-ceecCCCCCCCCCCCCCeeEeecCCCeE
Q 011094 191 WTGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGN-PVLVPPRHIGPKDFRDPTTAWAGPDGKW 268 (494)
Q Consensus 191 ~SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~n-PVi~~p~g~~~~~fRDP~V~w~~~dg~w 268 (494)
|...+.. .+|+++|+|+..... ....+.+|++++.. ..|+..... ++ ..-.||.+ |.++||++
T Consensus 80 WAP~v~~-~~g~yyl~~s~~~~~~~~~~i~va~a~~p~----Gp~~~~~~~~~~---------~~~iD~~~-f~D~DG~~ 144 (269)
T cd08986 80 WAPELHY-IKGRWYLVACMNNPGYGGSSILLSTSGKIE----GPYKHITGNKPL---------FPGIDPSL-FEDDDGKV 144 (269)
T ss_pred CCceEEE-ECCEEEEEEEccCCCCCceEEEEEeCCCCC----CCcEeccCCCCC---------CCccCCce-EEcCCCCE
Confidence 9999864 689999999976432 23456778776542 467764322 11 12469999 45678999
Q ss_pred EEEEeeecCCeeEEEEEEeCCCCCCEEcCcccccC----CCCCceEeccEEEec
Q 011094 269 RLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAV----PGTGMWECVDFYPVA 318 (494)
Q Consensus 269 ~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~~~----~~~gmwECPdlf~l~ 318 (494)
||+.++. .+ .--+.|+....-....+... ......|-|-+++.+
T Consensus 145 Yl~~~~~----~i--~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~ 192 (269)
T cd08986 145 YLVWHNT----LI--ARLKDDLSGLAGDPVRIDPSPTFYKDEIGHEGAFVFKYG 192 (269)
T ss_pred EEEeeCC----ce--EeccCccccccCCcEEEecccccccCCccccccEEEEEC
Confidence 9998753 11 11245655432111111111 011246888888864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.2e-08 Score=101.82 Aligned_cols=99 Identities=23% Similarity=0.335 Sum_probs=75.9
Q ss_pred eeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCC--CCCCCCCCCCCeeEeecCCCeEEE
Q 011094 193 GSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRL 270 (494)
Q Consensus 193 GSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p--~g~~~~~fRDP~V~w~~~dg~w~M 270 (494)
..++ ..||+++|+|++........+++|+|.|+ ++|++.+ +|++.++ ...+...++||.|+ + .+|+|+|
T Consensus 3 P~v~-~~~G~y~l~y~~~~~~~~~~ig~A~S~Dg-----~~~~~~~-~~~i~p~~~~~~~~~gv~dP~v~-~-~~g~y~m 73 (268)
T cd08993 3 PAVV-YDNGEFYLLYRAAGNDGVIRLGLARSRDG-----LHFEIDP-DPPVWPPPEDGFEEGGVEDPRIV-K-IDDTYYI 73 (268)
T ss_pred CeEE-EECCEEEEEEEEECCCCceEEEEEEECCC-----ceEEECC-cceEcCCCCCcccccCccCcEEE-E-ECCEEEE
Confidence 3454 47999999999876555678999999995 8999975 5555442 23445678999995 3 5889999
Q ss_pred EEeeec--CCeeEEEEEEeCCCCCCEEcCccc
Q 011094 271 TIGSKI--GKTGISLVYQTTDFKTYELLDEYL 300 (494)
Q Consensus 271 viGa~~--~~~G~v~lY~S~Dl~~W~~~~~ll 300 (494)
++++.. .....+.+++|+|+.+|+..+..+
T Consensus 74 ~Yta~~~~~~~~~i~lA~S~D~~~W~~~~~~~ 105 (268)
T cd08993 74 TYAARPNAPNGTRIGLATTKDFITFERLGTSL 105 (268)
T ss_pred EEEccCCCCCCcEEEEEEeCCcceEEEecccC
Confidence 998864 344578899999999999987543
|
This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.6e-07 Score=99.39 Aligned_cols=183 Identities=20% Similarity=0.200 Sum_probs=115.2
Q ss_pred cCCccceE-ECCEEEEEEeeCCCC----CCCCCcEEEEEEecCcc----CeeecceeccCCCCc-CCCcEEeeeEEEcc-
Q 011094 131 NDPNGPLF-YKGWYHLFYQYNPDS----AVWGNITWGHAVSADLI----HWLYLPIAMVPDQWY-DINGVWTGSATILP- 199 (494)
Q Consensus 131 NDPNG~~y-~~G~YHLFYQ~nP~~----~~wg~~~WGHA~S~DLv----hW~~~p~AL~Pd~~~-D~~Gv~SGSavv~~- 199 (494)
-|+.|-+. ++|+.-+|-.-.+.. ..|+..++++.-|++.. +|++.+.++...... ....-|||||+++.
T Consensus 63 qd~~G~~~~~~Gy~vvfaL~a~r~~~~~~Rh~~A~I~~fY~k~G~~~~~~W~~~G~vf~~g~~~~~~s~EWSGSA~l~~~ 142 (428)
T PF02435_consen 63 QDADGNVVNYNGYQVVFALTADRHEDPDDRHDDARIYLFYSKDGDNANDGWKNGGPVFPEGASFVPGSREWSGSATLNND 142 (428)
T ss_dssp E-TTSSBEEBTTEEEEEEEEE-TT--GGGCSCGEEEEEEEEETT--SGGG-EEEEESS-TTCCCCGCEEEEEEEEEESTT
T ss_pred ecccccEEEECCEEEEEEEecCCccCCccccCCcEEEEEEecCCCCccCCceECcccCCCCCCCCccCcEecCceEEcCC
Confidence 35556444 699777777766654 24567899999999999 999999877554431 23457999999987
Q ss_pred CCeEEEEEeccCC----CccceE-----EEEEEcCCCCCCcceEEEcCCCceecCCCCCC--------CCCCCCCeeEee
Q 011094 200 DGQIVMLYTGSTD----KSVQVQ-----NLAYPADPSDPLLLDWVKYPGNPVLVPPRHIG--------PKDFRDPTTAWA 262 (494)
Q Consensus 200 dG~~~~~YTG~~~----~~~q~q-----~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~--------~~~fRDP~V~w~ 262 (494)
||++.+|||.... ...|.. +++...+. ..-+..|+++ ..++. +.|.. ...||||++ |.
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~-~v~i~g~~~~--~~lfe-~DG~~Yqt~~Q~~~~afRDP~~-f~ 217 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDD-GVWITGFSNH--HELFE-GDGKHYQTYEQNPGYAFRDPHV-FE 217 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECST-EEEEEEEEEE--EEEES---SSSB--HHHHHH---EEEEE-EE
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCC-ceeEccccce--eEeec-cchhhhhChhhcCCccccCCee-EE
Confidence 8999999999542 222222 23333332 1223455554 34554 33321 257999999 55
Q ss_pred c-CCCeEEEEEeeec-------------------------C--------CeeEEEEEEeCC--CCCCEEcCcccccCCCC
Q 011094 263 G-PDGKWRLTIGSKI-------------------------G--------KTGISLVYQTTD--FKTYELLDEYLHAVPGT 306 (494)
Q Consensus 263 ~-~dg~w~MviGa~~-------------------------~--------~~G~v~lY~S~D--l~~W~~~~~ll~~~~~~ 306 (494)
+ .+|+-||+.-+.. . ..|+|.+.+.+| +..|++.++|+++..-.
T Consensus 218 DP~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~~~~w~~~~PL~~a~~v~ 297 (428)
T PF02435_consen 218 DPEDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDDGTVWELLPPLLSANGVN 297 (428)
T ss_dssp ETTTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTTTSEEEEEEEEEEETTTB
T ss_pred CCCCCcEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCCCCccEEeCcceeccccc
Confidence 4 5888888874320 0 267888887654 57899999999875555
Q ss_pred CceEeccEEEec
Q 011094 307 GMWECVDFYPVA 318 (494)
Q Consensus 307 gmwECPdlf~l~ 318 (494)
.+.|-|+++.++
T Consensus 298 de~ERP~iv~~~ 309 (428)
T PF02435_consen 298 DELERPHIVFMN 309 (428)
T ss_dssp S-EEEEEEEEET
T ss_pred ccccCCcEEEEC
Confidence 689999999996
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A .... |
| >cd08982 GH43_3 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.78 E-value=3.7e-07 Score=93.11 Aligned_cols=109 Identities=26% Similarity=0.423 Sum_probs=74.5
Q ss_pred ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEec
Q 011094 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTG 209 (494)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG 209 (494)
.-||. ++.++|+|+||-... + +..+|+||+||+..+.++. ..++|..++.. .+|++|++|+.
T Consensus 3 ~~DP~-i~~~~g~YY~~~T~~------~----~i~~S~DL~~W~~~g~~~~------~~~~WAP~i~~-~~g~~Y~~~~~ 64 (295)
T cd08982 3 AADPV-VILFKGEYYLFASMS------G----GYWHSSDLIDWDFIPTNSL------PDEGYAPAVFV-YDGTLYYTAST 64 (295)
T ss_pred CCCCe-EEEECCEEEEEEeCC------C----CeEECCCcCCceECCcccC------CCCcCcCEEEE-ECCEEEEEEeC
Confidence 36997 788899999886542 1 3688999999999987653 46799999864 78987766654
Q ss_pred cCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeee
Q 011094 210 STDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (494)
Q Consensus 210 ~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~ 275 (494)
. .+.+|+|+|.. .-.|+.. .+ . ......||.++ .++||++||+.|+.
T Consensus 65 ~------~~~v~~s~~p~---gp~w~~~--~~----~---~~~~~IDp~vf-~DdDGk~Yl~~g~~ 111 (295)
T cd08982 65 Y------NSRIYKTADPL---SGPWEEV--DK----S---FPPGLADPALF-IDDDGRLYLYYGCS 111 (295)
T ss_pred C------CceEEEeCCCC---CCCcccc--cc----c---cCCCccCCceE-ECCCCCEEEEEecC
Confidence 2 13467777652 1235442 01 0 11235799995 45789999998753
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08995 GH32_Aec43_like Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.7e-07 Score=92.51 Aligned_cols=154 Identities=18% Similarity=0.136 Sum_probs=99.8
Q ss_pred cCCccccccccceeeeecCCCc-----ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecc--eecc
Q 011094 108 NWTNAMFTWQRTSFHFQPEKNW-----MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP--IAMV 180 (494)
Q Consensus 108 ~~~~~~~~w~Rp~~Hf~P~~gw-----mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p--~AL~ 180 (494)
..+..+..|++-..-+.|+.++ +-.|+ +++.+|+|||||..+... .......++|+|+|+++|+..+ +.+.
T Consensus 35 a~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs-~~~~~g~~~l~YTg~~~~-~~~~~~i~~A~S~D~~~w~k~~~~pv~~ 112 (280)
T cd08995 35 LTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGS-VIKGEGTYHAFYTGHNLD-GKPKQVVMHATSDDLITWTKDPEFILIA 112 (280)
T ss_pred EEccCcCccEECcceecCCCCcccccCceEeE-EEeeCCEEEEEEEEECCC-CCCcEEEEEEECCCCCccEECCCCeecC
Confidence 3355567787666666663322 33454 566789999999865322 1124568999999999999875 3343
Q ss_pred CCCCcCCCcEEeeeEEEcc-CCeEEEEEeccCC----CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCC
Q 011094 181 PDQWYDINGVWTGSATILP-DGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFR 255 (494)
Q Consensus 181 Pd~~~D~~Gv~SGSavv~~-dG~~~~~YTG~~~----~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fR 255 (494)
+...++...+-...++.+. +|+++|+|.+... .....+.++.|+|. ++|+.. .+++.+.. ...+-
T Consensus 113 ~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~g~i~~~~S~Dl-----~~W~~~--~~~~~~~~---~~~~E 182 (280)
T cd08995 113 DGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRGCIALFTSKDL-----KNWEYE--EPFYAPGL---YFMPE 182 (280)
T ss_pred CccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCCeEEEEEEeCCc-----Ccceec--CceecCCC---cceee
Confidence 2333444445567776543 5999999987643 23345677888874 899876 45553321 12456
Q ss_pred CCeeEeecCCCeEEEEEeee
Q 011094 256 DPTTAWAGPDGKWRLTIGSK 275 (494)
Q Consensus 256 DP~V~w~~~dg~w~MviGa~ 275 (494)
-|.+ ++ .+|+|+|+++..
T Consensus 183 ~P~l-~~-~~g~~~L~~s~~ 200 (280)
T cd08995 183 CPDL-FK-MGDWWYLVYSEF 200 (280)
T ss_pred cceE-EE-ECCEEEEEEEec
Confidence 7888 44 679999999865
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a |
| >cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=98.77 E-value=1e-07 Score=96.29 Aligned_cols=122 Identities=18% Similarity=0.205 Sum_probs=86.1
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEE
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLY 207 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~Y 207 (494)
+..-||. +++.+|+|+|+..-.. + .......+|+||+||+..+.++.+. ..++|...++ ..+|+++|+|
T Consensus 13 ~~~~DP~-i~~~~~~yY~~~t~~~----~-~~gi~i~~S~DL~~W~~~g~~~~~~----~~~~WAP~i~-~~~gkyy~yy 81 (280)
T cd09002 13 GDYPDPS-ILRDGEDYYMTHSSFK----Y-TPGLVIWHSRDLVNWTPVGPALPEY----EGDVWAPDLC-KYDGRYYIYF 81 (280)
T ss_pred CCCCCCE-EEEECCEEEEEEcchh----c-CCCEEEEECCCcCCceEccccccCC----CCCEEcCeeE-EECCEEEEEE
Confidence 3445996 8888999999765211 1 1246788999999999988877542 4579999886 4899999999
Q ss_pred eccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEee
Q 011094 208 TGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (494)
Q Consensus 208 TG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa 274 (494)
+.......+.+.+|++++.. ..|++ |+... .....||.+++ ++||++||+.+.
T Consensus 82 s~~~~~~~~~~~va~ad~p~----Gpw~~----~~~~~-----~~~~IDp~vf~-DddG~~Yl~~~~ 134 (280)
T cd09002 82 PAIPEGGNWTNMVIWADSPE----GPWSK----PIDLK-----IGGCIDPGHVV-DEDGNRYLFLSG 134 (280)
T ss_pred EeecCCCCceEEEEEECCCC----CCCcC----CEecC-----CCCccCCceEE-cCCCCEEEEECC
Confidence 98764445667889887653 45754 22111 11236999965 578999999864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs |
| >cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.3e-07 Score=95.23 Aligned_cols=108 Identities=25% Similarity=0.334 Sum_probs=81.5
Q ss_pred cCCccceEECCEEEEEEeeCCCC----CCCCCcEEEEEEecC-ccCeeec-ceeccCCC-CcCCCcEEeeeEEEccCCeE
Q 011094 131 NDPNGPLFYKGWYHLFYQYNPDS----AVWGNITWGHAVSAD-LIHWLYL-PIAMVPDQ-WYDINGVWTGSATILPDGQI 203 (494)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~----~~wg~~~WGHA~S~D-LvhW~~~-p~AL~Pd~-~~D~~Gv~SGSavv~~dG~~ 203 (494)
-+|. +++++|+|+|||..+... ...++...|.|+|+| +-+|+.+ .++|.|.. .||..+++.++++..++|++
T Consensus 81 ~~P~-vi~~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~~ 159 (291)
T cd08994 81 HNPT-IKRFDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGSY 159 (291)
T ss_pred cCCe-EEEECCEEEEEEEcccCCcccccCCCCceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCCE
Confidence 3676 677899999999876431 112356799999999 4699984 46676654 36788899999987558999
Q ss_pred EEEEeccCCC---ccceEEEEEEcCCCCCCcceEEEcCCCcee
Q 011094 204 VMLYTGSTDK---SVQVQNLAYPADPSDPLLLDWVKYPGNPVL 243 (494)
Q Consensus 204 ~~~YTG~~~~---~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi 243 (494)
+|+|+|+... ..+.|++|+|+|.. ..|+|...+||+
T Consensus 160 ~m~y~g~~~~~~~~~~~~gla~s~d~~----g~~~~~~~~~v~ 198 (291)
T cd08994 160 LLVYKGGTYNPTKGNRKYGVAIADSPT----GPYTKVSGPPFI 198 (291)
T ss_pred EEEEeccccCCCCCcEEEEEEEeCCCC----CCCEECCCCccc
Confidence 9999998632 35778999998863 579998666664
|
This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f |
| >COG2152 Predicted glycosylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.4e-07 Score=95.46 Aligned_cols=147 Identities=22% Similarity=0.269 Sum_probs=110.8
Q ss_pred cceEECCEEEEEEee------CCCCCCCCCcEEEEEEecCccC-eeecc-eeccC-CCCcCCCcEEeeeEEEccCCeEEE
Q 011094 135 GPLFYKGWYHLFYQY------NPDSAVWGNITWGHAVSADLIH-WLYLP-IAMVP-DQWYDINGVWTGSATILPDGQIVM 205 (494)
Q Consensus 135 G~~y~~G~YHLFYQ~------nP~~~~wg~~~WGHA~S~DLvh-W~~~p-~AL~P-d~~~D~~Gv~SGSavv~~dG~~~~ 205 (494)
|+++.+|++||+|+- .+. .-.+.+-|.|+|.++ |+..+ +.+.| ..+++.-||.+..++. .||+++|
T Consensus 35 av~~~~~~~~~l~Rv~~~yye~~~----~~s~l~ia~s~dgi~~~~~e~ep~~~P~~~~~e~~G~EDPRvt~-I~~~y~m 109 (314)
T COG2152 35 AVVLVGGELLLLYRVVEGYYEDHS----SISHLRIARSDDGIGEFEIEPEPTLWPANYPYEIYGIEDPRVTK-IGGRYYM 109 (314)
T ss_pred eeEEECCEEEEEEEEeccccccCc----cceEEEEEecccCCCceecCCcceEecCCCchhhhcccCceEEE-ECCEEEE
Confidence 578889999999986 222 346788999999999 99777 77889 5578889999999975 7999999
Q ss_pred EEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-CC--eeEE
Q 011094 206 LYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GK--TGIS 282 (494)
Q Consensus 206 ~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-~~--~G~v 282 (494)
.|||.+.. .+..++|+++|. .+|+|.+ +++. | ++||-.++=...+|+|.|+---.. +. .+-+
T Consensus 110 tYTa~s~~-g~~~~la~t~~f-----~n~~rig--~i~~-p------dn~~~~lfP~~~ngk~~~lhr~~~~~~~~~~ni 174 (314)
T COG2152 110 TYTAYSDK-GPRLALAVTKDF-----LNWERIG--AIFP-P------DNKDAALFPKKINGKYALLHRPVLGEYGMKGNI 174 (314)
T ss_pred EEEecCCC-Ccccchhhhhhh-----hhhhhcc--cccC-C------CCCCceEeeEEecCcEEEEEeecccccCccCce
Confidence 99998654 477899999985 7899972 3332 2 446655521134789998865332 11 4678
Q ss_pred EEEEeCCCCCCEEcCcccc
Q 011094 283 LVYQTTDFKTYELLDEYLH 301 (494)
Q Consensus 283 ~lY~S~Dl~~W~~~~~ll~ 301 (494)
.+..|.|+.+|.....++.
T Consensus 175 wia~S~dl~~w~~~~~~l~ 193 (314)
T COG2152 175 WIAFSPDLEHWGIHRKLLG 193 (314)
T ss_pred EEEEcCCccCCCccceeec
Confidence 8999999999998755553
|
|
| >cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases | Back alignment and domain information |
|---|
Probab=98.71 E-value=7.4e-07 Score=90.24 Aligned_cols=208 Identities=17% Similarity=0.326 Sum_probs=131.1
Q ss_pred ccccceeeeecCCCc---ccCCccceEECCEEEEEEeeCCCCCCCCCcEEE-EEEecCccCeeecceecc----CCCCcC
Q 011094 115 TWQRTSFHFQPEKNW---MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWG-HAVSADLIHWLYLPIAMV----PDQWYD 186 (494)
Q Consensus 115 ~w~Rp~~Hf~P~~gw---mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WG-HA~S~DLvhW~~~p~AL~----Pd~~~D 186 (494)
+|.-..--.+|..|| +.||- +++++|+||+|-..... . .|+ ...| |+||+.++-|+. +.. .
T Consensus 6 ~w~stg~l~~pk~~~~~~lkDPt-iv~~nGkYyvYgT~~~~-~-----~~~s~~~S--f~~Ws~~g~A~q~~l~~~~--~ 74 (303)
T cd08987 6 RWTSTGPLISPKSDWIVAIKDPT-VVYYNGRYHVYATTADA-G-----NYGSMYFN--FTDWSQAASATQYYLQNGN--M 74 (303)
T ss_pred eeccCCccccCCCCCeeeecCCe-EEEECCEEEEEEccCCC-C-----Cceeeeec--ccCHhHhccchhhcccCCC--C
Confidence 343344456788899 88997 77888999999775431 1 243 3445 999998887652 221 2
Q ss_pred CCcEEeeeEEE-ccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCC
Q 011094 187 INGVWTGSATI-LPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPD 265 (494)
Q Consensus 187 ~~Gv~SGSavv-~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~d 265 (494)
..+.|...+.. .+++++||+|+-. ..+.|+|.|..+| -.|... .|++...........-|++|+ .++
T Consensus 75 ~~~fwAPqVfyf~pk~kwYL~Yq~~------~~~yaTs~dp~~P--~~ws~~--qpl~~~~~~~~~~~~ID~~vI--~Dd 142 (303)
T cd08987 75 TGYRVAPQVFYFAPQNKWYLIYQWW------PAAYSTNSDISNP--NGWSAP--QPLFSGTPNGSPGGWIDFWVI--CDD 142 (303)
T ss_pred CcccccCEEeeeccCCEEEEEEecC------ceEEEeCCCCCCC--CccCCC--cccccCcccCCCCCccceeEE--eCC
Confidence 44678888752 5789999999951 2568899888776 467654 566653222233456899995 467
Q ss_pred CeEEEEEeeecCCeeEEEEEEeC----CCCC--CEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEE
Q 011094 266 GKWRLTIGSKIGKTGISLVYQTT----DFKT--YELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLK 339 (494)
Q Consensus 266 g~w~MviGa~~~~~G~v~lY~S~----Dl~~--W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~ 339 (494)
++.||+... ..| .+|+|+ ||-. .+.. .+..........|-|+++++.+ +.+++|.
T Consensus 143 ~~~YLff~~---dnG--~iyra~~~~~nFp~~~~~~~-~~~~~~~~~~lfEa~~Vykv~G-------------~~~Ylmi 203 (303)
T cd08987 143 TNCYLFFSD---DNG--KLYRSSTTLGNFPNGGTETV-IIMSDSNKNNLFEASNVYKVKG-------------QNQYLLI 203 (303)
T ss_pred CCEEEEEec---CCC--eEEEEecchhhCCCCCCccE-EEecCCCccccceeeEEEEECC-------------CeEEEEE
Confidence 888888743 234 367763 2322 1111 1121111224799999999963 2378888
Q ss_pred eeeCCCceeEEEEEEe--cCCCCcccCC
Q 011094 340 ASLDDTKVDHYAIGTY--NPANDKWTPD 365 (494)
Q Consensus 340 ~s~~~~~~~~Y~iG~~--d~~~~~f~p~ 365 (494)
++..+..+..|+++ + +--.|.|+|.
T Consensus 204 veA~g~~~~rYfrs-~Ts~Sl~GpWt~~ 230 (303)
T cd08987 204 VEAIGSDGGRYFRS-WTATSLDGPWTPL 230 (303)
T ss_pred EEecCCCCCCeEEE-EEcCCCCCCceec
Confidence 88776544457777 3 3335688864
|
The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr |
| >cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F | Back alignment and domain information |
|---|
Probab=98.64 E-value=9.3e-07 Score=86.87 Aligned_cols=156 Identities=17% Similarity=0.140 Sum_probs=97.4
Q ss_pred CCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEE
Q 011094 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML 206 (494)
Q Consensus 127 ~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~ 206 (494)
.+-+.+|. +++++|+|+|||.....+ ......+.|+|+|+.+|........+ .....++..++++.++||+++|+
T Consensus 56 ~~~~waP~-v~~~~g~yyl~y~~~~~~--~~~~~i~~a~s~d~~g~~~~~~~~~~--~~~~~~~iDp~vf~d~dg~~yl~ 130 (271)
T cd08978 56 SGGLWAPE-VIYYEGKYYLYYSVSDFD--YNGSGIGVATSEDPTGPFEDKVIRPP--TSNNGNSIDPTVFKDDDGKYYLY 130 (271)
T ss_pred CCceeCCe-EEEECCEEEEEEEcccCC--CCcccEEEEECCCCCCCccccccCcC--ccCCCCccCcceEEcCCCCEEEE
Confidence 45677897 889999999999987542 23456899999999999765421111 11245678899988777999999
Q ss_pred EeccCCC-ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec--CCeeEEE
Q 011094 207 YTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI--GKTGISL 283 (494)
Q Consensus 207 YTG~~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~--~~~G~v~ 283 (494)
|.+.... ....+.++.+.+. ..|.. ..+++..........+-.|.+ ++ .+|+|+|++.+.. ...-.+.
T Consensus 131 ~~~~~~~~~~~~i~~~~l~~~-----~~~~~--~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl~ys~~~~~~~~y~~~ 201 (271)
T cd08978 131 YGSGDPGAGFGGIYISELTDD-----LTKPT--GPPVLSASSGNNNAVTEGPTI-FK-KNGYYYLTYSANGTGDYGYNIG 201 (271)
T ss_pred EecccCCCCCCcEEEEEECcc-----ccccc--CCceeeeeeccCCCceEccEE-EE-ECCEEEEEEEeCCCCCCCceEE
Confidence 9876421 1234566666553 22222 123321111111224568998 44 5799999987642 2233566
Q ss_pred EEEeCCCC-CCEEc
Q 011094 284 VYQTTDFK-TYELL 296 (494)
Q Consensus 284 lY~S~Dl~-~W~~~ 296 (494)
+++|++.. -|+..
T Consensus 202 ~~~s~~~~Gp~~~~ 215 (271)
T cd08978 202 YATSDSIDGPYVKK 215 (271)
T ss_pred EEECCCCCCCcCcC
Confidence 77888763 35544
|
This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma |
| >cd08999 GH43_ABN_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.3e-06 Score=87.33 Aligned_cols=172 Identities=16% Similarity=0.149 Sum_probs=103.0
Q ss_pred cccccccceeeeecCCC-----cccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-Ceeeccee-cc-CCC
Q 011094 112 AMFTWQRTSFHFQPEKN-----WMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIA-MV-PDQ 183 (494)
Q Consensus 112 ~~~~w~Rp~~Hf~P~~g-----wmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv-hW~~~p~A-L~-Pd~ 183 (494)
++..|.+...-+.+... -+..|. +++++|+|||||.-+-.+ ..+...|+|+|+|.. .|+..+.. +. +.
T Consensus 39 Dl~~W~~~g~~l~~~~~~~~~~~~waP~-v~~~~g~y~~~y~~~~~~--~~~~~i~~a~s~~p~g~~~~~~~~~~~~~~- 114 (287)
T cd08999 39 DLVNWTYLGDAFPKLPRWWTGGDFWAPD-VSYVNGKYVLYYSARDKG--SGGQCIGVATADSPLGPFTDHGKPPLCCPE- 114 (287)
T ss_pred CCCCcEECCcccCCCCCcccCCCccCce-EEEECCEEEEEEEeecCC--CCCEEEEEEECCCCCCCCccCCcceEecCC-
Confidence 35566554433333332 234564 788899999999866433 235678999999965 89877532 22 22
Q ss_pred CcCCCcEEeeeEEEccCCeEEEEEeccCCC--ccceEEEE-EEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeE
Q 011094 184 WYDINGVWTGSATILPDGQIVMLYTGSTDK--SVQVQNLA-YPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA 260 (494)
Q Consensus 184 ~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~--~~q~q~lA-~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~ 260 (494)
+..+....++++++||+++|+|.+.... ..+.+.++ .+.|+ .+|+... ..++.+........+--|.++
T Consensus 115 --~~~~~~Dp~v~~d~dG~~Yl~~~~~~~~~~~~~~i~~~~ls~d~-----~~~~~~~-~~i~~~~~~~~~~~~EgP~i~ 186 (287)
T cd08999 115 --GEGGAIDPSFFTDTDGKRYLVWKSDGNSIGKPTPIYLQELSADG-----LTLTGEP-VRLLRNDEDWEGPLVEAPYLV 186 (287)
T ss_pred --CCCCccCCCeEECCCCCEEEEEeccCCCCCCCceEEEEEeCCCC-----ccccCCc-EeeecccccccCCceEeeEEE
Confidence 2345677888877799999999764322 11224444 44443 5665321 223332222222345578884
Q ss_pred eecCCCeEEEEEeeec--CC--eeEEEEEEeCCCC-CCEEcC
Q 011094 261 WAGPDGKWRLTIGSKI--GK--TGISLVYQTTDFK-TYELLD 297 (494)
Q Consensus 261 w~~~dg~w~MviGa~~--~~--~G~v~lY~S~Dl~-~W~~~~ 297 (494)
+ .+|+|||++.+.. .. .=.+.+++|+|+. .|+..+
T Consensus 187 -k-~~g~yyl~~S~~~~~~~~~~y~i~~~~s~~~~Gpw~~~~ 226 (287)
T cd08999 187 -K-RGGYYYLFYSAGGCCSGASTYAVGVARSKSLLGPYVKAP 226 (287)
T ss_pred -E-ECCEEEEEEEcCCccCCCCCEEEEEEEeCCCcCCcCCCC
Confidence 4 5899999997642 11 2246678999976 787654
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.7e-06 Score=83.82 Aligned_cols=157 Identities=17% Similarity=0.151 Sum_probs=99.7
Q ss_pred CcccCCccceEEC-CEEEEEEeeCCCCCCCCCcEEEEEEecCccC-eeecc-eeccCCC--CcCCCcEEeeeEEEccCCe
Q 011094 128 NWMNDPNGPLFYK-GWYHLFYQYNPDSAVWGNITWGHAVSADLIH-WLYLP-IAMVPDQ--WYDINGVWTGSATILPDGQ 202 (494)
Q Consensus 128 gwmNDPNG~~y~~-G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvh-W~~~p-~AL~Pd~--~~D~~Gv~SGSavv~~dG~ 202 (494)
+-+-.|. +++++ |+|+|||..... ..+....+.|+|+|+.. |+... ..+.+.. ..+...+..++++.++||+
T Consensus 58 ~~~wap~-v~~~~~g~~~l~yt~~~~--~~~~~~i~~a~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d~dG~ 134 (286)
T cd08772 58 GGIWAPS-IVYIENGKFYLYYTDVSF--TKNQQTIGVATAEDGNGPWTDYIGGPVLPDNPPAADVSNFRDPFVFEDDDGK 134 (286)
T ss_pred CcEecce-EEEcCCCCEEEEEEeecC--CCCceeEEEEEcCCCCCCCccccccccccCCCCccccccccCCeEEEcCCCC
Confidence 3455776 67777 999999986543 22356789999999976 55432 1122221 2234467889998776799
Q ss_pred EEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec----CC
Q 011094 203 IVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI----GK 278 (494)
Q Consensus 203 ~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~----~~ 278 (494)
++|+|.+........+.+|.|+|. .+|++.+..+++.... ....+--|.++ + .+|+|+|++.+.. +.
T Consensus 135 ~y~~~~~~~~~~~~~i~~~~s~d~-----~~w~~~~~~~~~~~~~--~~~~~E~P~~~-~-~~g~~yL~~s~~~~~~~~~ 205 (286)
T cd08772 135 WYLVFGSGDHHNFGGIFLYESDDD-----TTWKKGSAELLISEGE--GGKQIEGPGLL-K-KNGKYYLFYSINGTGRVDS 205 (286)
T ss_pred EEEEEccccCCCCCeEEEEEcCCC-----CCcccccceeeEeecc--CCCceeccEEE-E-ECCEEEEEEEcCCCcCCCC
Confidence 999998865433456889999885 7888753222222211 22356789994 3 5799999998653 22
Q ss_pred eeEEEEEEeCC-CCCCEEc
Q 011094 279 TGISLVYQTTD-FKTYELL 296 (494)
Q Consensus 279 ~G~v~lY~S~D-l~~W~~~ 296 (494)
.-.+.+++|++ .-.|+..
T Consensus 206 ~y~~~~~~~~~~~g~~~~~ 224 (286)
T cd08772 206 TYSIGYARSESDTGPYVPK 224 (286)
T ss_pred CcceEEEEccCCCCCcccC
Confidence 22455667765 3445543
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 |
| >cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.47 E-value=6e-06 Score=83.23 Aligned_cols=154 Identities=15% Similarity=0.144 Sum_probs=90.9
Q ss_pred cccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEE
Q 011094 129 WMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLY 207 (494)
Q Consensus 129 wmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv-hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~Y 207 (494)
.+-.|. +++.+|+|||||...... ......++|+|+|.. .|+..+..+.+.. .....++++.++||+++|+|
T Consensus 54 ~~waP~-v~~~~g~yyl~ys~~~~~--~~~~~i~~a~s~~p~gp~~~~~~~~~~~~----~~~iD~~vf~d~dG~~yl~~ 126 (294)
T cd08991 54 GFWAPE-VYYYNGKFYMYYSANDRD--EKTEHIGVAVSDSPLGPFRDIKKPPIDFE----PKSIDAHPFIDDDGKPYLYY 126 (294)
T ss_pred cEEccE-EEEECCEEEEEEEeccCC--CCcceEEEEEeCCCCCCCCcCCCCcccCC----CcccCCceEECCCCCEEEEE
Confidence 344786 888999999999866432 134678999999977 6887654333321 34567888888789999999
Q ss_pred eccCCCc--cceEEEEEEcCCCCCCcceEEEcCC---CceecC-------CCC----CCCCCCCCCeeEeecCCCeEEEE
Q 011094 208 TGSTDKS--VQVQNLAYPADPSDPLLLDWVKYPG---NPVLVP-------PRH----IGPKDFRDPTTAWAGPDGKWRLT 271 (494)
Q Consensus 208 TG~~~~~--~q~q~lA~S~D~~d~lL~~W~K~~~---nPVi~~-------p~g----~~~~~fRDP~V~w~~~dg~w~Mv 271 (494)
+...... ...+..+.+.|. .+|..... .++..+ +.. .+..-.--|.++ + .+|+|||+
T Consensus 127 ~~~~~~~~~~~i~~~~l~~d~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~-k-~~g~yyl~ 199 (294)
T cd08991 127 SRNNYGNRVSDIYGTELVDDK-----LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVL-K-HNGRYYLT 199 (294)
T ss_pred EecCCCCcccceEEEEEccce-----eeeccceeeccccccccccccccccccccccccCceeeCcEEE-E-ECCEEEEE
Confidence 8754321 223344556553 45542111 122111 000 011123457773 3 57999999
Q ss_pred Eeeec-CCee-EEEEEEeCC-CCCCEEc
Q 011094 272 IGSKI-GKTG-ISLVYQTTD-FKTYELL 296 (494)
Q Consensus 272 iGa~~-~~~G-~v~lY~S~D-l~~W~~~ 296 (494)
..+.. .... .+.+.+|++ +-.|+..
T Consensus 200 ys~~~~~~~~y~~~~a~s~~~~gp~~~~ 227 (294)
T cd08991 200 YSANHYENEDYGVGYATADSPLGPWTKY 227 (294)
T ss_pred EECCCCCCCCceEEEEEcCCCCCCcEec
Confidence 86532 1111 355667876 4678764
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase | Back alignment and domain information |
|---|
Probab=98.44 E-value=5.9e-06 Score=82.75 Aligned_cols=152 Identities=15% Similarity=0.070 Sum_probs=94.2
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-Ceeecce-eccCCCCcCCCcEEeeeEEEccCCeEEE
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPI-AMVPDQWYDINGVWTGSATILPDGQIVM 205 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv-hW~~~p~-AL~Pd~~~D~~Gv~SGSavv~~dG~~~~ 205 (494)
+-+--|. +++++|+|||||..... .+....|+|+|+|.. .|+.... .+.+ ...+......++++++.||+++|
T Consensus 62 ~~~wAP~-i~~~~g~yy~yy~~~~~---~~~~~igva~s~~p~Gpw~~~~~~~~~~-~~~~~~~~iDp~vf~d~dG~~yl 136 (274)
T cd08990 62 GQAWAPD-VVEKNGKYYLYFPARDK---DGGFAIGVAVSDSPAGPFKDAGGPILIT-TPSGGWYSIDPAVFIDDDGQAYL 136 (274)
T ss_pred CCcCcCe-EEEECCEEEEEEEeecC---CCceEEEEEEeCCCCCCCCCCCCccccc-cCCCCCCccCCcEEECCCCCEEE
Confidence 4455687 88899999999987543 234678999999976 7998763 3332 22234456788888877899999
Q ss_pred EEeccCCCccceEEEE-EEcCCCCCCcceEEEcCCCceecCCC---CCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeE
Q 011094 206 LYTGSTDKSVQVQNLA-YPADPSDPLLLDWVKYPGNPVLVPPR---HIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGI 281 (494)
Q Consensus 206 ~YTG~~~~~~q~q~lA-~S~D~~d~lL~~W~K~~~nPVi~~p~---g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~ 281 (494)
+|.+. +.+.++ .+.| +.+|+.. ..++..+. .....-+--|.+ ++ .+|+|||++.+.. ...
T Consensus 137 ~~~~~-----~~~~~~~l~~d-----~~~~~~~--~~~i~~~~~~~~~~~~~~EgP~i-~k-~~G~YYl~yS~~~--~~~ 200 (274)
T cd08990 137 YWGGG-----LGLRVAKLKPD-----MLSLKGE--PVEIVITDGAGDELRRFFEAPWV-HK-RNGTYYLSYSTGD--PEE 200 (274)
T ss_pred EECCc-----CCEEEEEeCcc-----ccccCCC--cEEEEeccccCCCCCCcccceeE-EE-ECCEEEEEEECCC--CcE
Confidence 99864 223444 3334 3666532 22332111 001112346888 44 6899999987642 345
Q ss_pred EEEEEeCCCC-CCEEcCccc
Q 011094 282 SLVYQTTDFK-TYELLDEYL 300 (494)
Q Consensus 282 v~lY~S~Dl~-~W~~~~~ll 300 (494)
+.+.+|+++. -|+..+.++
T Consensus 201 ~~~a~s~~p~GP~~~~g~~~ 220 (274)
T cd08990 201 IAYATSDSPLGPFTYRGVIL 220 (274)
T ss_pred EEEEEcCCCCCCcccCcEEe
Confidence 5566787764 465544443
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of |
| >cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.6e-06 Score=84.98 Aligned_cols=157 Identities=17% Similarity=0.149 Sum_probs=99.5
Q ss_pred CcCCccccccccceeeeecCCCc----ccCCccceEEC-CEEEEEEeeCCCCCCCCCcEEEEEEec-CccCeeeccee-c
Q 011094 107 YNWTNAMFTWQRTSFHFQPEKNW----MNDPNGPLFYK-GWYHLFYQYNPDSAVWGNITWGHAVSA-DLIHWLYLPIA-M 179 (494)
Q Consensus 107 ~~~~~~~~~w~Rp~~Hf~P~~gw----mNDPNG~~y~~-G~YHLFYQ~nP~~~~wg~~~WGHA~S~-DLvhW~~~p~A-L 179 (494)
+.-+..++.|++..-=+.|...+ +-.++ ++.++ |+|+|||.-+......+...-++|+|+ |+++|+..+.. +
T Consensus 36 ha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGs-av~~~~g~~~~~YTg~~~~~~~~~~~~~lA~S~ddg~~w~k~~~~~~ 114 (298)
T cd08996 36 HATSKDLVHWEHLPVALAPDDPYDSGGCFSGS-AVVDDNGKLVLFYTGNVKLDGGRRQTQCLAYSTDDGRTFTKYEGNPV 114 (298)
T ss_pred EEEecCccceeECCcccCCCCcccCCeEEeCe-EEEcCCCcEEEEEeceeCCCCCceEEEEEEEEcCCCCEEEECCCCce
Confidence 34455677786655445552222 12233 34456 999999986532211234667999999 89999987622 2
Q ss_pred cCCCCcCCCcEEeeeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCee
Q 011094 180 VPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTT 259 (494)
Q Consensus 180 ~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V 259 (494)
.+....+..++-...++. .+|+++|+|++...+....+.++.|+|+ ++|++. .++.... +.....+-.|.+
T Consensus 115 ~~~~~~~~~~~RDP~V~~-~~g~~~m~~g~~~~~~~~~i~ly~S~Dl-----~~W~~~--~~~~~~~-~~~~~~~EcP~l 185 (298)
T cd08996 115 IPPPDGYTTHFRDPKVFW-HDGKWYMVLGAGTEDGTGRILLYRSDDL-----KNWEYL--GELLTSL-GDFGYMWECPDL 185 (298)
T ss_pred EcCCCCCCCcccCCeEEe-ECCEEEEEEEEEecCCCcEEEEEECCCC-----CCCEEc--ceecccC-CCccceEeCCcE
Confidence 211222345667888865 5699999999876544566788999885 899986 3442211 112245678998
Q ss_pred EeecCC--CeEEEEEeee
Q 011094 260 AWAGPD--GKWRLTIGSK 275 (494)
Q Consensus 260 ~w~~~d--g~w~MviGa~ 275 (494)
++ -+ ++|+|+++..
T Consensus 186 -~~-l~~~~k~vL~~s~~ 201 (298)
T cd08996 186 -FP-LDVEGKWVLIFSPQ 201 (298)
T ss_pred -EE-ECCCCeEEEEECCC
Confidence 44 46 9999999865
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal |
| >cd08998 GH43_ABN_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.34 E-value=2e-05 Score=79.41 Aligned_cols=153 Identities=17% Similarity=0.159 Sum_probs=91.1
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCc--cCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEE
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADL--IHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVM 205 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DL--vhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~ 205 (494)
+-+..|. +++.+|+|||||..+..+. ++...++|+|+|+ -.|+..++.+.++.......+..+++++++||+++|
T Consensus 56 ~~~wAP~-v~~~~g~yyl~ys~~~~~~--~~~~i~va~s~~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~dG~~Yl 132 (288)
T cd08998 56 GNLWAPD-VIYLNGKYYLYYSVSTFGS--NRSAIGLATSDTLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDEDGKLWL 132 (288)
T ss_pred CCccCCe-EEEECCEEEEEEEEEeCCC--CceEEEEEEeCCCCCCCCEEcceeeecCCCCCCcccccCCEEEcCCCCEEE
Confidence 3455676 7788999999998764321 2456899999998 799988766655433233457788998877999999
Q ss_pred EEeccCCCccceEEEEE-EcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeee-cC---Cee
Q 011094 206 LYTGSTDKSVQVQNLAY-PADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK-IG---KTG 280 (494)
Q Consensus 206 ~YTG~~~~~~q~q~lA~-S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~-~~---~~G 280 (494)
+|.+... .+.++. +.|.+.+ ..+... ...++..+.+ ....-.|++ ++ .+|.|||++.+. .. ..+
T Consensus 133 ~~~~~~~----~i~~~~l~~~~~~~--~~~~~~-~~~i~~~~~~--~~~~Egp~~-~k-~~g~YYl~~S~~~~~~~~~~~ 201 (288)
T cd08998 133 SFGSFWG----GIFLVELDPKTGKP--LYPGGY-GYNIAGRPRG--HGAIEAPYI-IY-RGGYYYLFVSYGGCCAGEDST 201 (288)
T ss_pred EeeeccC----CEEEEEeCcccCCc--cCCCCc-ceEEeccCCC--CCceeeeEE-EE-eCCEEEEEEEcchhcCCCCCc
Confidence 9975422 123332 2232211 222110 0112221111 112357888 44 689999998643 11 122
Q ss_pred -EEEEEEeCCCC-CCE
Q 011094 281 -ISLVYQTTDFK-TYE 294 (494)
Q Consensus 281 -~v~lY~S~Dl~-~W~ 294 (494)
++.+++|+++. -|+
T Consensus 202 y~v~~~~s~~~~GP~~ 217 (288)
T cd08998 202 YNIRVGRSKSITGPYV 217 (288)
T ss_pred eEEEEEEcCCCCCCcC
Confidence 56788998853 344
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08986 GH43_7 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.32 E-value=6.2e-06 Score=82.88 Aligned_cols=121 Identities=14% Similarity=0.090 Sum_probs=70.9
Q ss_pred CCCCeeEeecCCCeEEEEEeeecC---------CeeEEEEEEeCCCCCCEEcCcccccCC--------------CCCceE
Q 011094 254 FRDPTTAWAGPDGKWRLTIGSKIG---------KTGISLVYQTTDFKTYELLDEYLHAVP--------------GTGMWE 310 (494)
Q Consensus 254 fRDP~V~w~~~dg~w~MviGa~~~---------~~G~v~lY~S~Dl~~W~~~~~ll~~~~--------------~~gmwE 310 (494)
+|||+|+ +..+|.|||+..+... ..+.+.+|+|+||++|+..+.++...+ ..+..+
T Consensus 2 ~rDP~v~-~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~W 80 (269)
T cd08986 2 IRDTYVT-LGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVW 80 (269)
T ss_pred CcCCeEE-ecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcC
Confidence 7999995 5567889988665421 123577999999999999887764321 123455
Q ss_pred eccEEEecccCccccccccCCCCeEEEEEeeeCCC--ceeEEEEEEecCCCCcccCCCCCcccccceeeecCCCccccee
Q 011094 311 CVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT--KVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSF 388 (494)
Q Consensus 311 CPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~--~~~~Y~iG~~d~~~~~f~p~~~~~d~g~~~rlD~G~fYA~qtf 388 (494)
||+++.++ .|++|..+.... ......+..=|...+.|+..... + .+. .-.-+..|
T Consensus 81 AP~v~~~~---------------g~yyl~~s~~~~~~~~~~i~va~a~~p~Gp~~~~~~~-~-----~~~--~~iD~~~f 137 (269)
T cd08986 81 APELHYIK---------------GRWYLVACMNNPGYGGSSILLSTSGKIEGPYKHITGN-K-----PLF--PGIDPSLF 137 (269)
T ss_pred CceEEEEC---------------CEEEEEEEccCCCCCceEEEEEeCCCCCCCcEeccCC-C-----CCC--CccCCceE
Confidence 99999985 267776665421 11223333333334566532110 0 000 12336778
Q ss_pred ecCCCCcEEEE
Q 011094 389 YDPYKKRRIVW 399 (494)
Q Consensus 389 ~d~~~~Rril~ 399 (494)
.|. +|+..|+
T Consensus 138 ~D~-DG~~Yl~ 147 (269)
T cd08986 138 EDD-DGKVYLV 147 (269)
T ss_pred EcC-CCCEEEE
Confidence 875 5676654
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.8e-06 Score=89.03 Aligned_cols=107 Identities=21% Similarity=0.283 Sum_probs=80.9
Q ss_pred CCCcEEeeeEEEccCCe--EEEEEeccCCCccc-eEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEee
Q 011094 186 DINGVWTGSATILPDGQ--IVMLYTGSTDKSVQ-VQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWA 262 (494)
Q Consensus 186 D~~Gv~SGSavv~~dG~--~~~~YTG~~~~~~q-~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~ 262 (494)
....||-..|++ .+|. ++|+|.+....... .+++|.|.|+ ++|++. .+||+.|...++....-||.|..
T Consensus 28 ~~~~vfNpgai~-~~~~~R~~l~yr~~~~~~~~~~iglA~S~DG-----i~f~~~-~~pil~P~~~~e~~GvEDPRVt~- 99 (312)
T PF04041_consen 28 EPNAVFNPGAIV-FDGGLRVYLLYRAYGSDIGSSRIGLARSDDG-----IHFERD-PEPILYPDTDYEEWGVEDPRVTK- 99 (312)
T ss_dssp TSSEEEEEEEEE-ETTE--EEEEEEEEESSSSEEEEEEEEESSS-----SS-EE--SS-SBEE-SSTTHTEEEEEEEEE-
T ss_pred CcceEEcCcEEE-ECCeeEEEEEEEeECCCCceeEEEEEEccCC-----cCceEC-CCCEEccCCCCcccCccceeEEE-
Confidence 356799999976 4555 89999887655444 7999999997 899986 57999876555555678999964
Q ss_pred cCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcCcccc
Q 011094 263 GPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLH 301 (494)
Q Consensus 263 ~~dg~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~ 301 (494)
.+|+|+|++.+.......+.+.+|+||.+|+..+..+.
T Consensus 100 -i~d~yymtYta~~~~~~~~~la~s~D~~~~~r~g~~~~ 137 (312)
T PF04041_consen 100 -IDDTYYMTYTAYSGKGPRIGLATSKDFKHWERHGKIFP 137 (312)
T ss_dssp -ETTEEEEEEEEEESSSEEEEEEEESSSSSEEEEECTTT
T ss_pred -ECCEEEEEEEEecCCCcccceEEccchHhhEEeccccC
Confidence 46899999988755555778899999999999987654
|
On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B. |
| >cd08983 GH43_4 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.30 E-value=6.4e-06 Score=83.25 Aligned_cols=79 Identities=24% Similarity=0.391 Sum_probs=56.4
Q ss_pred CCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-----CCeeEEEEEEeCCCCCCEEcCcccccCCCCC-ceEe
Q 011094 238 PGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----GKTGISLVYQTTDFKTYELLDEYLHAVPGTG-MWEC 311 (494)
Q Consensus 238 ~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-----~~~G~v~lY~S~Dl~~W~~~~~ll~~~~~~g-mwEC 311 (494)
.++|||.+.. +...+|||+|++..++|+|+|+..... .....+.+|+|+||++|+..+.++...+..+ +| |
T Consensus 4 ~~~pvl~~~~--g~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~~~~~~W-A 80 (276)
T cd08983 4 NGNPVLTSTA--GTKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPPNAGNTW-A 80 (276)
T ss_pred CCceEEeCCc--CCCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCCCcCcEe-C
Confidence 4689998643 457899999975436899999876532 1122577999999999999877653223334 56 9
Q ss_pred ccEEEecc
Q 011094 312 VDFYPVAI 319 (494)
Q Consensus 312 Pdlf~l~~ 319 (494)
|+++....
T Consensus 81 Pev~~d~~ 88 (276)
T cd08983 81 PEAFWDAE 88 (276)
T ss_pred ccceEcCC
Confidence 99998853
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.20 E-value=3e-05 Score=77.27 Aligned_cols=172 Identities=13% Similarity=0.126 Sum_probs=102.6
Q ss_pred CccccccccceeeeecCCCcccC-------CccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CeeecceeccC
Q 011094 110 TNAMFTWQRTSFHFQPEKNWMND-------PNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVP 181 (494)
Q Consensus 110 ~~~~~~w~Rp~~Hf~P~~gwmND-------PNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv-hW~~~p~AL~P 181 (494)
+..+..|......+.+...+... |. +++.+|+|||||...... .....+.|+|++.. .|+.......+
T Consensus 40 S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~-i~~~~g~yy~y~~~~~~~---~~~~~~va~a~~~~Gp~~~~~~~~~~ 115 (286)
T PF04616_consen 40 SKDLVNWTDAGNVLPPPPDWDWANNGNIWAPE-IHYINGKYYMYYSDSGGD---AGSGIGVATADSPDGPWTDPGKIPIP 115 (286)
T ss_dssp ESSSSSEEEEEECESSTTTTSTTTSETTEEEE-EEEETTEEEEEEEEESTS---TTEEEEEEEESSTTS-EEEEEEEEEE
T ss_pred CCCCcccccceeeecccccccccccccccCCe-EEEcCCeEEEEEEccCCC---CCcceeEEEeCCcccccccccceeec
Confidence 34566787777777665444322 43 677899999999922211 23458899999986 89987654433
Q ss_pred CCCcCCCcEEeeeEEEccCCeEEEEEeccCCC-ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeE
Q 011094 182 DQWYDINGVWTGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA 260 (494)
Q Consensus 182 d~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~ 260 (494)
...+..+++++++||+.+|+|.+.... ..+.+.+|...+. ..++.......+..........-.--|++
T Consensus 116 -----~~~~iD~~vf~d~dG~~Yl~~~~~~~~~~~~~i~~~~l~~d----~~~~~~~~~~~~~~~~~~~~~~~~Egp~~- 185 (286)
T PF04616_consen 116 -----GGNSIDPSVFVDDDGKYYLYYGSWDNGDPGGGIYIAELDPD----GTSLTGEPVVVIFPGDEGWDGGVVEGPFV- 185 (286)
T ss_dssp -----SSSSSSEEEEEETTSEEEEEEEESTTTSSEEEEEEEEEETT----TSSEEEEECEEEEEESGSSTTTBEEEEEE-
T ss_pred -----cccccCceEEEecCCCcEEeCcccCCCccceeEEeecccCc----cccccCcccccccccccccCCccccceEE-
Confidence 234567888887779999999987543 2344455544332 13444332122222211111122335887
Q ss_pred eecCCCeEEEEEeeec-CCeeEEEEEEeCCCCC-CEEc
Q 011094 261 WAGPDGKWRLTIGSKI-GKTGISLVYQTTDFKT-YELL 296 (494)
Q Consensus 261 w~~~dg~w~MviGa~~-~~~G~v~lY~S~Dl~~-W~~~ 296 (494)
++ .+|.|||++.+.. ...=.+.+++|+|+.. |+..
T Consensus 186 ~k-~~g~yYl~~s~~~~~~~y~v~~~~s~~~~gp~~~~ 222 (286)
T PF04616_consen 186 FK-HGGKYYLFYSAGGTGSPYQVGYARSDSPLGPWEWK 222 (286)
T ss_dssp EE-ETTEEEEEEEESGSSTTTEEEEEEESSTTSGGEET
T ss_pred EE-cCCCEEEEEeccCCCCCceEEEeeccCCCCceeec
Confidence 44 6899999988642 2112456789999865 4543
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B .... |
| >TIGR01322 scrB_fam sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Probab=98.07 E-value=5.4e-05 Score=81.57 Aligned_cols=156 Identities=14% Similarity=0.143 Sum_probs=94.2
Q ss_pred CCccccccccceeeeecCCCc----ccCCccceEECCEEEEEEeeCCCCCCCC-CcEEEEEEecCccCeeecc-eeccCC
Q 011094 109 WTNAMFTWQRTSFHFQPEKNW----MNDPNGPLFYKGWYHLFYQYNPDSAVWG-NITWGHAVSADLIHWLYLP-IAMVPD 182 (494)
Q Consensus 109 ~~~~~~~w~Rp~~Hf~P~~gw----mNDPNG~~y~~G~YHLFYQ~nP~~~~wg-~~~WGHA~S~DLvhW~~~p-~AL~Pd 182 (494)
-+..+..|++-.-=+.|..-| +-.++ .+..+|++||||..+.....+. ...-++|+|+|+.+|+..+ +.|.+.
T Consensus 61 ~S~Dlv~W~~~~~al~P~~~~d~~G~~sGs-av~~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi~~~ 139 (445)
T TIGR01322 61 TSKDLVHWEDEGVALAPDDPYDSHGCYSGS-AVDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGHFEKFGIVVIELP 139 (445)
T ss_pred ECCCccccEECCccCcCCCcccCCceEECe-EEeeCCEEEEEEeccccCCCCCeeEEEEEEEcCCCCeEEECCCceEeCC
Confidence 355577786644444454322 12343 3457999999998764322222 2334689999999999876 455543
Q ss_pred CCcCCCcEEeeeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCC---CCCCCCCCCCee
Q 011094 183 QWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR---HIGPKDFRDPTT 259 (494)
Q Consensus 183 ~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~---g~~~~~fRDP~V 259 (494)
......+.-...|+ ..+|+++|+|.+..........+..|+| |++|+.. .++..+.. +.....|-.|-+
T Consensus 140 ~~~~~~~fRDP~V~-~~~g~~~M~~g~~~~~~~g~i~ly~S~D-----l~~W~~~--g~~~~~~~~~~~~~g~~~ECPdl 211 (445)
T TIGR01322 140 PAGYTAHFRDPKVW-KHNGHWYMVIGAQTETEKGSILLYRSKD-----LKNWTFV--GEILGDGQNGLDDRGYMWECPDL 211 (445)
T ss_pred CCCCcCcCCCCcEE-eECCEEEEEEEEecCCCceEEEEEECCC-----cccCeEe--cccccccccccCCccceEECCeE
Confidence 22112234456664 4689999999876543323456777777 4899986 34443321 111124668887
Q ss_pred EeecCCCeEEEEEeee
Q 011094 260 AWAGPDGKWRLTIGSK 275 (494)
Q Consensus 260 ~w~~~dg~w~MviGa~ 275 (494)
++ -+|+|+|+++..
T Consensus 212 -f~-l~~k~vL~~s~~ 225 (445)
T TIGR01322 212 -FS-LDGQDVLLFSPQ 225 (445)
T ss_pred -EE-ECCcEEEEEecc
Confidence 43 578999998753
|
|
| >cd08981 GH43_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.05 E-value=6.2e-05 Score=76.66 Aligned_cols=66 Identities=18% Similarity=0.145 Sum_probs=47.9
Q ss_pred CCCCCCeeEeecCCCeEEEEEeeecC-----CeeEEEEEEeCCCCCCEEcCcccccCC---CCCceEeccEEEec
Q 011094 252 KDFRDPTTAWAGPDGKWRLTIGSKIG-----KTGISLVYQTTDFKTYELLDEYLHAVP---GTGMWECVDFYPVA 318 (494)
Q Consensus 252 ~~fRDP~V~w~~~dg~w~MviGa~~~-----~~G~v~lY~S~Dl~~W~~~~~ll~~~~---~~gmwECPdlf~l~ 318 (494)
..+|||+|++...+|+|||+..+... ..| +.+|+|+||++|+..+.++.... .....++|+++..+
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~~~~~~~g-i~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~~ 77 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNIWGGEGTG-FDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEYK 77 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccccccCCCc-EEEEECCChhcccccceeeccCCCcCccccccCCeeeeeC
Confidence 35899999765558999999765421 123 67999999999999888774322 12356789998774
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=98.01 E-value=9.2e-05 Score=74.35 Aligned_cols=68 Identities=19% Similarity=0.307 Sum_probs=48.6
Q ss_pred CceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcCcccccC---------CCCCceE
Q 011094 240 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAV---------PGTGMWE 310 (494)
Q Consensus 240 nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~~~---------~~~gmwE 310 (494)
||||. .++.||.|+ + .++.|||+.++.....| +.+|+|+||.+|+..+..+... ...++|
T Consensus 1 NPvi~-------~~~~DP~ii-~-~~~~yY~~~t~~~~~~g-~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~W- 69 (269)
T cd08989 1 NPILK-------GDNPDPSII-R-AGDDYYMASSTFEWFPG-VQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIW- 69 (269)
T ss_pred CCcCC-------CCCCCCcEE-E-ECCeEEEEECccccCCC-cEEEECCccCCCEEccccccCccccccccCCCCCcEE-
Confidence 67764 357899995 3 57899999765322234 6689999999999988776431 122467
Q ss_pred eccEEEec
Q 011094 311 CVDFYPVA 318 (494)
Q Consensus 311 CPdlf~l~ 318 (494)
||+++..+
T Consensus 70 AP~v~~~~ 77 (269)
T cd08989 70 APCLSYYD 77 (269)
T ss_pred cceEEEEC
Confidence 99999884
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended |
| >cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00017 Score=72.90 Aligned_cols=68 Identities=19% Similarity=0.331 Sum_probs=48.7
Q ss_pred CCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcCcccccCCCCCceEeccEEEec
Q 011094 239 GNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318 (494)
Q Consensus 239 ~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~ 318 (494)
.||||. .++.||.|+ + .+++|||+.++.. ..+.+.+|+|+||.+|+..+..+... ..++| +|+++..+
T Consensus 7 ~nPv~~-------~~~~DP~i~-~-~~~~yY~~~t~~~-~~~gi~i~~S~DL~~W~~~g~~~~~~-~~~~W-AP~i~~~~ 74 (280)
T cd09002 7 RNPILA-------GDYPDPSIL-R-DGEDYYMTHSSFK-YTPGLVIWHSRDLVNWTPVGPALPEY-EGDVW-APDLCKYD 74 (280)
T ss_pred eCCccC-------CCCCCCEEE-E-ECCEEEEEEcchh-cCCCEEEEECCCcCCceEccccccCC-CCCEE-cCeeEEEC
Confidence 488875 246799995 3 4789999765322 22346799999999999988766432 23578 89998874
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs |
| >cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00025 Score=74.24 Aligned_cols=178 Identities=16% Similarity=0.172 Sum_probs=104.5
Q ss_pred CcCCccccccccceeeeecCCCcc-----cCCccceEECCEEEEEEeeCCCCC---CCCCcEEEEEEecCccC----eee
Q 011094 107 YNWTNAMFTWQRTSFHFQPEKNWM-----NDPNGPLFYKGWYHLFYQYNPDSA---VWGNITWGHAVSADLIH----WLY 174 (494)
Q Consensus 107 ~~~~~~~~~w~Rp~~Hf~P~~gwm-----NDPNG~~y~~G~YHLFYQ~nP~~~---~wg~~~WGHA~S~DLvh----W~~ 174 (494)
+-.+..+..|.+ .-++.|+ ++. --+..++..+|+|||||.-+-... ..-....++|+++|+.. |+.
T Consensus 45 h~~S~dlv~W~~-~~~l~p~-~~~d~~g~wSGsa~~~~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~ 122 (349)
T cd08997 45 YFYSRAGGNWID-GGKVFPD-GLSPGSREWSGSATLDDDGTVQLFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFED 122 (349)
T ss_pred EEEeCCCCcccC-CCccCCC-CcccCCCeEcceEEEeCCCeEEEEEeccccCCCCCCCceEEEEEEECCCcceEecccCc
Confidence 334455556655 3444453 221 112222233599999998763211 11235689999999844 444
Q ss_pred cceeccCCC-CcCC-------------CcEEeeeEEEcc-CCeEEEEEeccCCCc-------------------------
Q 011094 175 LPIAMVPDQ-WYDI-------------NGVWTGSATILP-DGQIVMLYTGSTDKS------------------------- 214 (494)
Q Consensus 175 ~p~AL~Pd~-~~D~-------------~Gv~SGSavv~~-dG~~~~~YTG~~~~~------------------------- 214 (494)
+...+.++. .|+. ...-...++.++ +|+++|++++++...
T Consensus 123 ~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~ 202 (349)
T cd08997 123 HHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGAS 202 (349)
T ss_pred cceeeeCCCceEEeccccccccccCccCcccCCEEEecCCCCcEEEEEEeccCCCCCccccccccccccccccccccccc
Confidence 445566655 3321 123356666655 699999999987422
Q ss_pred --cceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecC-------CeeEEEEE
Q 011094 215 --VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG-------KTGISLVY 285 (494)
Q Consensus 215 --~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~-------~~G~v~lY 285 (494)
.-++++|.+.+. .|.+|+-+ .|++.+. +. ...+-+|.++ + .+|+|||+..++.. +...+..|
T Consensus 203 ~~~G~IGia~~~s~---dl~~W~~~--~PL~~a~-~v-~d~~E~P~v~-~-~~gk~yL~~s~~~~~~~~~~~~~~~~~g~ 273 (349)
T cd08997 203 YQNGNVGIAVAKND---DLTEWKLL--PPLLEAN-GV-NDELERPHVV-F-HNGKYYLFTISHRSTFAPGLSGPDGLYGF 273 (349)
T ss_pred cccceEEEEEecCC---CCCCcEEc--CccccCC-Cc-CCceEcceEE-E-ECCEEEEEEeCCcCccccccCCCCcEEEE
Confidence 235667876643 25789976 5777643 21 2347799994 4 69999999775421 11235567
Q ss_pred EeCCCC-CCEE
Q 011094 286 QTTDFK-TYEL 295 (494)
Q Consensus 286 ~S~Dl~-~W~~ 295 (494)
.|+++. -|+.
T Consensus 274 vsdsl~GP~~~ 284 (349)
T cd08997 274 VSDSLRGPYKP 284 (349)
T ss_pred EeCCCCCCCcc
Confidence 888864 3443
|
Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n |
| >smart00640 Glyco_32 Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00013 Score=78.35 Aligned_cols=158 Identities=15% Similarity=0.158 Sum_probs=95.1
Q ss_pred CcCCccccccccceeeeecCCCcccCCcc-----ceEECCEEEEEEeeCC-CCC--CCCCc-EEEEEEecCccCeeecc-
Q 011094 107 YNWTNAMFTWQRTSFHFQPEKNWMNDPNG-----PLFYKGWYHLFYQYNP-DSA--VWGNI-TWGHAVSADLIHWLYLP- 176 (494)
Q Consensus 107 ~~~~~~~~~w~Rp~~Hf~P~~gwmNDPNG-----~~y~~G~YHLFYQ~nP-~~~--~wg~~-~WGHA~S~DLvhW~~~p- 176 (494)
+..+..+..|++..-=+.|... .|.+| ++.++|.|||||.-+- ... ...+. .-.+|+|+|++||+..+
T Consensus 42 ha~S~Dlv~W~~~~~aL~P~~~--~d~~g~~sGsav~~~~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~~~w~k~~~ 119 (437)
T smart00640 42 HAVSKDLVHWTHLPVALAPDEW--YDSNGVFSGSAVIDPGNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLGGTWTKYPG 119 (437)
T ss_pred EEEcCCcceeeecCcccCCCCc--CCCCcEEEEEEEECCCceEEEEcCCcccccccCcccEEEEEEEECCCCCeeEECCC
Confidence 4445667788654433556542 35554 3445788999998652 111 12222 23678899999999973
Q ss_pred -eeccCCCCcCCCcEEeeeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCC
Q 011094 177 -IAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFR 255 (494)
Q Consensus 177 -~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fR 255 (494)
+.|.+...+.....-+..++..++|+++|++.+...+..-.+.++.|+|+ ++|+.. .++..+..+.....|-
T Consensus 120 ~Pvi~~~p~~~~~~fRDP~Vf~~~~~~~~m~~g~~~~~~~G~i~ly~S~Dl-----~~W~~~--~~~~~~~~~~~g~~wE 192 (437)
T smart00640 120 NPVLVPPPGIGTEHFRDPKVFWYDGDKWYMVIGASDEDKTGIALLYRSTDL-----KNWTLL--GELLHSGVGDTGGMWE 192 (437)
T ss_pred CcEEeCCCCCCCCCcCCCCccEECCCEEEEEEEEEecCCCeEEEEEECCCc-----ccCeEC--CcccccCCCCccceEE
Confidence 55555433223334456665444469999998765444455778888874 899886 3454431121113567
Q ss_pred CCeeEeecCCC-----eEEEEEeee
Q 011094 256 DPTTAWAGPDG-----KWRLTIGSK 275 (494)
Q Consensus 256 DP~V~w~~~dg-----~w~MviGa~ 275 (494)
.|-. ++ -++ +|+|+++..
T Consensus 193 CPdl-f~-l~~~~~~~~~vLi~s~~ 215 (437)
T smart00640 193 CPDL-FP-LPGDGDTSKHVLKVSPQ 215 (437)
T ss_pred CCcE-EE-eCCCCCceeEEEEECcC
Confidence 7877 33 344 899988765
|
|
| >cd08988 GH43_ABN Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.0011 Score=66.79 Aligned_cols=145 Identities=14% Similarity=0.137 Sum_probs=81.8
Q ss_pred ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc------CeeecceeccCCCCcCCCcEEeeeEEEccCCeE
Q 011094 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI------HWLYLPIAMVPDQWYDINGVWTGSATILPDGQI 203 (494)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv------hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~ 203 (494)
+.-|. +.+++|+|||||.....+. .....|.|+|++.. .|+...+.+.++.. +......++++++.||+.
T Consensus 57 ~WAP~-v~~~~G~yylyys~~~~~~--~~~~igva~s~~p~Gp~~~~~w~~~~~i~~~~~~-~~~~~iDp~~f~DdDG~~ 132 (279)
T cd08988 57 LWAPD-IYQHNGKFYLYYSVSAFGS--NTSAIGLAVNKTIDGPSPDYGWEKGGVVISSDAS-DNYNAIDPAIIFDQHGQP 132 (279)
T ss_pred Eecce-EEEECCEEEEEEEeccCCC--CCceEEEEEcCCCCCCCcCcCccccCceEecCCC-CCCCccCCceEEcCCCCE
Confidence 44565 7889999999998765432 23568999999853 25543444444332 223457888988889999
Q ss_pred EEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCC--ceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-----
Q 011094 204 VMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN--PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI----- 276 (494)
Q Consensus 204 ~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~n--PVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~----- 276 (494)
+|+|..... + ....-.+.|... .. ..+. .++..+. .....--|++ ++ .+|.|||+..+..
T Consensus 133 Yl~~g~~~~-g--i~~~eL~~d~~~-----~~-~~~~~~~i~~~~~--~~~~~Egp~i-~k-~~g~YYl~~S~g~~~~~~ 199 (279)
T cd08988 133 WLSFGSFWG-G--IKLFELDKDTMK-----PA-EPGELHSIAGRER--SSAAIEAPFI-LY-RGDYYYLFVSFGLCCRGG 199 (279)
T ss_pred EEEecccCC-C--EEEEEECcccCC-----cc-CCCcceEEeccCC--CCCceEeeEE-EE-cCCeEEEEEEcCcccCCC
Confidence 999964321 1 112223333221 10 0111 1221111 1112346888 54 6899999876431
Q ss_pred CCeeEEEEEEeCCCC
Q 011094 277 GKTGISLVYQTTDFK 291 (494)
Q Consensus 277 ~~~G~v~lY~S~Dl~ 291 (494)
+..-.+.+++|+++.
T Consensus 200 ~~~y~v~~arS~~~~ 214 (279)
T cd08988 200 DSTYKIAVGRSKNIT 214 (279)
T ss_pred CCCeEEEEEEeCCCC
Confidence 122357788998763
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla |
| >COG2152 Predicted glycosylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00014 Score=74.02 Aligned_cols=105 Identities=18% Similarity=0.268 Sum_probs=81.3
Q ss_pred cEEeeeEEEccCCeEEEEEeccC-----CCccceEEEEEEcCCCCCCcce-EEEcCCCceecC-CCCCCCCCCCCCeeEe
Q 011094 189 GVWTGSATILPDGQIVMLYTGST-----DKSVQVQNLAYPADPSDPLLLD-WVKYPGNPVLVP-PRHIGPKDFRDPTTAW 261 (494)
Q Consensus 189 Gv~SGSavv~~dG~~~~~YTG~~-----~~~~q~q~lA~S~D~~d~lL~~-W~K~~~nPVi~~-p~g~~~~~fRDP~V~w 261 (494)
.+|-++++. .++++.|+|.... ........+|.|+|+ .+ |++. .+|++.| -..++....-||.|.
T Consensus 30 ~vFNpav~~-~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dg-----i~~~~~e-~ep~~~P~~~~~e~~G~EDPRvt- 101 (314)
T COG2152 30 SVFNPAVVL-VGGELLLLYRVVEGYYEDHSSISHLRIARSDDG-----IGEFEIE-PEPTLWPANYPYEIYGIEDPRVT- 101 (314)
T ss_pred EEecceeEE-ECCEEEEEEEEeccccccCccceEEEEEecccC-----CCceecC-CcceEecCCCchhhhcccCceEE-
Confidence 789998875 6899999998732 234567889999997 55 9986 4788887 323445567899995
Q ss_pred ecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcCccccc
Q 011094 262 AGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHA 302 (494)
Q Consensus 262 ~~~dg~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~~ 302 (494)
..+|+|+|.+.+..+..-...+..++|+.+|++.+.++.+
T Consensus 102 -~I~~~y~mtYTa~s~~g~~~~la~t~~f~n~~rig~i~~p 141 (314)
T COG2152 102 -KIGGRYYMTYTAYSDKGPRLALAVTKDFLNWERIGAIFPP 141 (314)
T ss_pred -EECCEEEEEEEecCCCCcccchhhhhhhhhhhhcccccCC
Confidence 3689999999998655556778899999999999888753
|
|
| >cd08980 GH43_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0012 Score=66.65 Aligned_cols=146 Identities=16% Similarity=0.177 Sum_probs=84.0
Q ss_pred cCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeeccee-ccCCCCcCCC--cEEeeeEEEccCC
Q 011094 125 PEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIA-MVPDQWYDIN--GVWTGSATILPDG 201 (494)
Q Consensus 125 P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~A-L~Pd~~~D~~--Gv~SGSavv~~dG 201 (494)
+..++..||+ ++.++|+++|||-..-.....+...|....+ |...+...+.. ..|...|+.. ++.-|..++..+|
T Consensus 108 ~~~~~~iDp~-~~~ddG~~Yl~~~~~~~~~~~~~~i~~~~l~-~~~~~~g~~~~i~~p~~~we~~~~~~~EgP~~~k~~G 185 (288)
T cd08980 108 PTDRWAIDGT-VFEHNGQLYFVWSGWEGRTNGNQNLYIAKMS-NPWTLTGPRVLISRPEYDWERQGPGVNEGPAALKRNG 185 (288)
T ss_pred CCCCeeeeeE-EEEECCEEEEEEEccCCCCCCCccEEEEECC-CCCccCCcceEecCCCCCceecCceeeECcEEEEECC
Confidence 4456778997 6777899999985322111111223443333 33445433433 3444445443 5677888888899
Q ss_pred eEEEEEeccCC-CccceEEEEEEcCCCCCCc-ceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCe-EEEEEee
Q 011094 202 QIVMLYTGSTD-KSVQVQNLAYPADPSDPLL-LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGK-WRLTIGS 274 (494)
Q Consensus 202 ~~~~~YTG~~~-~~~q~q~lA~S~D~~d~lL-~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~-w~MviGa 274 (494)
.++|+|++... .....+++|+++...+++. ..|+|. .+||+.....-....--...+ +..++|+ |+|++=+
T Consensus 186 ~yYl~yS~~~~~~~~Y~v~~a~~~~~~~~~~~~~~~~~-~~pil~~~~~~~~~g~GH~~i-v~~~~G~~~~~~yH~ 259 (288)
T cd08980 186 KVFLTYSASGSWTPDYCLGLLTADGGADLLDPASWTKS-PTPVFQSSPENGVYGPGHNSF-TKSPDGTEDWIVYHA 259 (288)
T ss_pred EEEEEEECCCCCCCCCEEEEEEEcCCCCCCChhhCcCC-CCCceecCCCCccCcCCccce-EECCCCCEEEEEEcc
Confidence 99999997654 3345667888765433321 358886 478887543100011123444 3456776 8888644
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0011 Score=66.38 Aligned_cols=138 Identities=15% Similarity=0.086 Sum_probs=83.0
Q ss_pred cCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-Ceee-cc-eeccCCCCcCCCcEEeeeEEEccCCeEEEEE
Q 011094 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLY-LP-IAMVPDQWYDINGVWTGSATILPDGQIVMLY 207 (494)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv-hW~~-~p-~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~Y 207 (494)
--|. +++++|+|+|||..+ ...|+|+|+|.. .|+. .+ +.+.+.. ......+++++.+.||+++|+|
T Consensus 67 wAP~-v~~~~g~yy~yys~~--------~~i~va~s~~p~gp~~~~~~~p~~~~~~--~~~~~iDp~vf~d~dG~~yl~~ 135 (275)
T cd09004 67 WAPS-VIERNGKYYFYFSAN--------GGIGVAVADSPLGPFKDALGKPLIDKFT--FGAQPIDPDVFIDDDGQAYLYW 135 (275)
T ss_pred CCCe-EEEECCEEEEEEEcC--------CcEEEEEeCCCCCCCCCCCCCccccCCc--CCCCccCCCeEECCCCCEEEEE
Confidence 3465 788899999999854 357999999965 6887 33 3333321 2234567888877899999999
Q ss_pred eccCCCccceEEE-EEEcCCCCCCcceEEEcCCCcee-cCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-C-CeeEEE
Q 011094 208 TGSTDKSVQVQNL-AYPADPSDPLLLDWVKYPGNPVL-VPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-G-KTGISL 283 (494)
Q Consensus 208 TG~~~~~~q~q~l-A~S~D~~d~lL~~W~K~~~nPVi-~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-~-~~G~v~ 283 (494)
.+.. ...+ ..+.|. .+|+.. ..++ ..+. .-+--|.+ ++ .+|+|||++.+.. . ..-.+.
T Consensus 136 ~~~~-----~~~i~~l~~d~-----~~~~~~--~~~~~~~~~----~~~EgP~i-~k-~~G~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 136 GGWG-----HCNVAKLNEDM-----ISFDGE--RDGSEITPK----NYFEGPFM-FK-RNGIYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred cCcC-----CEEEEEECCCc-----ccccCc--ceeeeccCC----CceecceE-EE-ECCEEEEEEECCCCCCCCceEE
Confidence 7531 1223 234443 556432 1121 1111 12457888 44 6899999987642 1 122455
Q ss_pred EEEeCCCC-CCEEcC
Q 011094 284 VYQTTDFK-TYELLD 297 (494)
Q Consensus 284 lY~S~Dl~-~W~~~~ 297 (494)
+.+|++.. -|+..+
T Consensus 198 ya~s~~~~GP~~~~~ 212 (275)
T cd09004 198 YAMADSPLGPFERPG 212 (275)
T ss_pred EEEcCCCCCCcccCC
Confidence 66887753 366544
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0023 Score=64.33 Aligned_cols=133 Identities=14% Similarity=0.097 Sum_probs=78.1
Q ss_pred ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEe
Q 011094 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYT 208 (494)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv-hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YT 208 (494)
+--|. ++|.+|+|||||-.+. ...+.|+|++.. .|+..+... ...+++++++.||+.+|+|.
T Consensus 76 ~WAP~-v~~~~gkyy~yys~~~-------~~~~v~~a~~p~Gpw~~~~~~~---------~~iDp~~f~D~dG~~Yl~~~ 138 (269)
T cd09001 76 QWAPS-LRYHNGTFYVFFCTNT-------GGTYIYTADDPEGPWTKTALDG---------GYHDPSLLFDDDGTAYLVYG 138 (269)
T ss_pred EECCc-eEEECCEEEEEEEecC-------CCeEEEEcCCCCCCCcCCCcCC---------CcccCceEEcCCCCEEEEeC
Confidence 34565 7888999999998751 124677777743 576654321 34577888888999999996
Q ss_pred ccCCCccceEEEE-EEcCCCCCCcceEEEcCCCc-eecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEE
Q 011094 209 GSTDKSVQVQNLA-YPADPSDPLLLDWVKYPGNP-VLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQ 286 (494)
Q Consensus 209 G~~~~~~q~q~lA-~S~D~~d~lL~~W~K~~~nP-Vi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~ 286 (494)
+. .+.++ .+.|. .... ...+ ++..+. ......--|++ ++ .+|.|||++.+..+....+.+++
T Consensus 139 ~~------~i~~~~l~~d~-----~~~~--~~~~~~~~~~~-~~~~~~Egp~i-~k-~~G~YYl~~S~~~~~~~~~~~~~ 202 (269)
T cd09001 139 GG------TIRLVELSPDL-----TGVG--GKDQVIIDAGE-EIGLGAEGSHL-YK-INGYYYIFNIAWGGGGRTQTCLR 202 (269)
T ss_pred CC------cEEEEEECccc-----CCcC--CCceEEEeCCC-ccccccccCeE-EE-ECCEEEEEEecCCCCCceEEEEE
Confidence 53 23343 33332 2221 1222 333221 11123457888 44 68999999876422223556789
Q ss_pred eCCCCC-CEE
Q 011094 287 TTDFKT-YEL 295 (494)
Q Consensus 287 S~Dl~~-W~~ 295 (494)
|+++.. |+.
T Consensus 203 s~~~~GP~~~ 212 (269)
T cd09001 203 SKSLTGPYES 212 (269)
T ss_pred eCCCCCCcCC
Confidence 988543 544
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd08985 GH43_6 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0043 Score=62.27 Aligned_cols=146 Identities=16% Similarity=0.198 Sum_probs=86.8
Q ss_pred ccCCccceEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEE
Q 011094 130 MNDPNGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML 206 (494)
Q Consensus 130 mNDPNG~~y~--~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv-hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~ 206 (494)
+--|. ++|+ +|+|||||..+... .+....|+|+|++.. -|+.++..+ |. .......++++++||+.+|+
T Consensus 65 ~waP~-v~y~~~~g~Y~m~~~~~~~~--~~~~~igvA~Sd~p~Gpf~~~~~~~-~~----~~~~~Dp~vf~DdDG~~Yl~ 136 (265)
T cd08985 65 IERPK-VIYNAKTGKYVMWMHIDSSD--YSDARVGVATSDTPTGPYTYLGSFR-PL----GYQSRDFGLFVDDDGTAYLL 136 (265)
T ss_pred EECCe-EEEeCCCCEEEEEEEeCCCC--CcceeEEEEEeCCCCCCCEECCccC-CC----CCCccCCceEEcCCCCEEEE
Confidence 44454 5664 59999999976422 245689999998764 477765432 21 23456788888889999999
Q ss_pred EeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecC-CeeEEEEE
Q 011094 207 YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG-KTGISLVY 285 (494)
Q Consensus 207 YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~-~~G~v~lY 285 (494)
|....+ +.+.++.-.+. +..+ .+.+..... ....-.|.+ ++ .+|.|||+...... ....+..+
T Consensus 137 ~~~~~~---~~i~i~~L~~d----~~~~---~~~~~~~~~----~~~~EaP~i-~K-~~g~YYL~~S~~t~~~~~~~~y~ 200 (265)
T cd08985 137 YSDRDN---SDLYIYRLTDD----YLSV---TGEVTTVFV----GAGREAPAI-FK-RNGKYYLLTSGLTGWNPNDARYA 200 (265)
T ss_pred EecCCC---CceEEEEeCCC----cccc---cceEEEccC----CCccccceE-EE-ECCEEEEEEccCCCccCCceEEE
Confidence 986532 23444432221 1333 223332111 124568988 54 68999999865321 11234567
Q ss_pred EeCCCC-CCEEcCcc
Q 011094 286 QTTDFK-TYELLDEY 299 (494)
Q Consensus 286 ~S~Dl~-~W~~~~~l 299 (494)
+|+++. -|+..+.+
T Consensus 201 ~s~s~~GP~~~~~~~ 215 (265)
T cd08985 201 TATSILGPWTDLGNP 215 (265)
T ss_pred EecCCCCCccccCcC
Confidence 888763 56665544
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0044 Score=63.90 Aligned_cols=167 Identities=19% Similarity=0.243 Sum_probs=100.1
Q ss_pred ccccceeeeecC--CCcccCCccceEEC-CEEEEEEeeCCCCC-------CCCCcEEEEEEecCc-cCeeecceeccCCC
Q 011094 115 TWQRTSFHFQPE--KNWMNDPNGPLFYK-GWYHLFYQYNPDSA-------VWGNITWGHAVSADL-IHWLYLPIAMVPDQ 183 (494)
Q Consensus 115 ~w~Rp~~Hf~P~--~gwmNDPNG~~y~~-G~YHLFYQ~nP~~~-------~wg~~~WGHA~S~DL-vhW~~~p~AL~Pd~ 183 (494)
.|..++.-.... ...+.||. ++... |+-+|||...+... .+......+..|+|- ..|.. |..|.+..
T Consensus 59 tW~~~~~i~~~~~~~~~~~~p~-~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~-p~~l~~~~ 136 (351)
T cd00260 59 TWSPSTVISDGDGKSSRVKDPT-VVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDDGITWSS-PRDLTPSV 136 (351)
T ss_pred cccccEEehhcCCCCCcEEcce-EEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcCCceecC-CccCCccc
Confidence 465554433332 24567897 77776 99999998877542 123455667888775 89975 33333332
Q ss_pred C-cCCCcEE--eeeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeE
Q 011094 184 W-YDINGVW--TGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA 260 (494)
Q Consensus 184 ~-~D~~Gv~--SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~ 260 (494)
. .+....+ .|+.++..+|++++.+.+....+.....+.+|+|.+ .+|+... ++ .+ ......|.++
T Consensus 137 ~~~~~~~~~~~~g~gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~~--~~----~~~~~e~~i~ 204 (351)
T cd00260 137 KGDNWAALFTGPGSGIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSG----KTWKLGE--GV--ND----AGGCSECSVV 204 (351)
T ss_pred cCcceeEEEecCcCeEEecCCcEEEEEEEEcCCCCEEEEEEEECCCC----CCcEECC--CC--CC----CCCCcCCEEE
Confidence 1 1112223 234455678998876554433334556778899875 8997632 11 11 1233568874
Q ss_pred eecCCCeEEEEEeeecCCeeEEEEEEeCC-CCCCEEcCc
Q 011094 261 WAGPDGKWRLTIGSKIGKTGISLVYQTTD-FKTYELLDE 298 (494)
Q Consensus 261 w~~~dg~w~MviGa~~~~~G~v~lY~S~D-l~~W~~~~~ 298 (494)
.-++|+.+|+..... .|...+|.|.| ..+|+....
T Consensus 205 -el~dG~l~~~~R~~~--~~~~~~~~S~D~G~tWs~~~~ 240 (351)
T cd00260 205 -ELSDGKLYMYTRDNS--GGRRPVYESRDMGTTWTEALG 240 (351)
T ss_pred -EecCCEEEEEEeeCC--CCcEEEEEEcCCCcCcccCcC
Confidence 335898888766532 46667888887 589997544
|
They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. |
| >cd09003 GH43_AXH_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0056 Score=62.98 Aligned_cols=167 Identities=13% Similarity=0.193 Sum_probs=93.0
Q ss_pred cccccccceeeeec--CCCc---ccCCccceEEC----CEEEEEEeeCCCCCCCCCcEEEEEEecCcc-Ceeec-ceec-
Q 011094 112 AMFTWQRTSFHFQP--EKNW---MNDPNGPLFYK----GWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYL-PIAM- 179 (494)
Q Consensus 112 ~~~~w~Rp~~Hf~P--~~gw---mNDPNG~~y~~----G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv-hW~~~-p~AL- 179 (494)
.+..|+....-|.| ...| +--|. +++++ |+|+|||... ....|.|+|+|.. .|+.+ +..|
T Consensus 55 DL~~W~~~g~v~~~~~~~~w~~~~WAP~-v~~~~~~~~gkyylyy~~~-------~~~igva~SdsP~GP~~~~~g~~l~ 126 (311)
T cd09003 55 DMVNWTDHGEIFVPNGIAKWAGNSWAPS-IAVKKINGKGKFYLYFANG-------GGGIGVLTADSPVGPWTDPLGKPLI 126 (311)
T ss_pred CCCCcEEcccccCcCCCCCcccccCCCc-eEEeccCCCCEEEEEEecC-------CCeEEEEEcCCCCCCcccCCCCeee
Confidence 35566554444432 2223 23465 67787 9999999632 2357999999954 79875 3222
Q ss_pred cCCC-CcC-CCcEEeeeEEEccCCeEEEEEeccCC----CccceEEEEEEc-CCCCCCcceEEEcCCCceecCCCCCCCC
Q 011094 180 VPDQ-WYD-INGVWTGSATILPDGQIVMLYTGSTD----KSVQVQNLAYPA-DPSDPLLLDWVKYPGNPVLVPPRHIGPK 252 (494)
Q Consensus 180 ~Pd~-~~D-~~Gv~SGSavv~~dG~~~~~YTG~~~----~~~q~q~lA~S~-D~~d~lL~~W~K~~~nPVi~~p~g~~~~ 252 (494)
.+.. ..+ ......+++++++||+.+|+|.+... ...+.+.+|.-. |. .+ ..+.++....+ .
T Consensus 127 ~~~~~~~~~~~~~iDp~~f~DdDG~~Yl~~g~~~~~~~~~~~~~i~i~~l~~D~-----~~---~~g~~~~i~~~----~ 194 (311)
T cd09003 127 TGSTPGCAGVVWLFDPAVFVDDDGQGYLYFGGGVPGGRWANPNTARVIKLGDDM-----IS---VDGSAVTIDAP----Y 194 (311)
T ss_pred cCCCCCccCCccccCCCeEECCCCCEEEEECCccCCCccccCCCEEEEEeCCCc-----ee---ccCCceEccCC----C
Confidence 2211 111 12246888888889999999975332 111334444332 32 22 22233322211 2
Q ss_pred CCCCCeeEeecCCCeEEEEEeeec-------CCeeEEEEEEeCCC-CCCEEcCccc
Q 011094 253 DFRDPTTAWAGPDGKWRLTIGSKI-------GKTGISLVYQTTDF-KTYELLDEYL 300 (494)
Q Consensus 253 ~fRDP~V~w~~~dg~w~MviGa~~-------~~~G~v~lY~S~Dl-~~W~~~~~ll 300 (494)
.+--|++ ++ .+|.|||+..+.. .....+.+.+|++. --|+..+.++
T Consensus 195 ~~Egp~~-~K-~~G~YYL~ys~~~~~~~~~~~~~y~v~y~~s~~~~GP~~~~g~il 248 (311)
T cd09003 195 FFEASGL-HK-INGTYYYSYCTNFGGRDPGKPPPGRIAYMTSKNPMGPFTYKGIIL 248 (311)
T ss_pred ceEeeeE-EE-ECCEEEEEEeCCCCccCCCCCCceeEEEEEcCCCCCCcccCCEec
Confidence 3457887 44 6899999886531 22345556678764 3477655554
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose |
| >cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0064 Score=61.40 Aligned_cols=144 Identities=17% Similarity=0.113 Sum_probs=82.4
Q ss_pred ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEe
Q 011094 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYT 208 (494)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv-hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YT 208 (494)
+.-|. +++++|+|||||...... +....+.|+|+|.. -|++ +..+ +. .+..++++.++||+.+|+|.
T Consensus 68 ~WAP~-v~~~~g~yy~yy~~~~~~---~~~~~~v~~s~~p~gpw~~-~~~~-~~------~~iDp~vf~d~dG~~Y~~~~ 135 (288)
T cd09000 68 IWAPT-IRYHDGTFYLITTNVDGM---KDGGNFIVTADDPAGPWSD-PVWL-DS------GGIDPSLFFDDDGKVYLVGN 135 (288)
T ss_pred eEcce-EEEECCEEEEEEEecCCC---CCCceEEEEeCCCCCCCcC-CEec-CC------CccCCceeEcCCCCEEEEec
Confidence 34576 788999999999866432 22345678898873 6774 2222 21 45678888877999999886
Q ss_pred ccCCC----ccceEEEEEEcCCCCCCcceEEEcCCCce-ecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-CCeeEE
Q 011094 209 GSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPV-LVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGIS 282 (494)
Q Consensus 209 G~~~~----~~q~q~lA~S~D~~d~lL~~W~K~~~nPV-i~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-~~~G~v 282 (494)
..... ....+.++..+. ..++-. +.+. +.... .....--|.+ ++ .+|+|||++.+.. ...-.+
T Consensus 136 ~~~~~~~~~~~~~i~~~~l~~------~~~~~~-~~~~~~~~~~--~~~~~Egp~v-~k-~~g~YYl~ys~~~~~~~~~v 204 (288)
T cd09000 136 GWDERRGYNGHGGIWLQEIDL------ETGKLL-GEPKVIWNGT--GGRWPEGPHL-YK-RDGWYYLLIAEGGTGYGHSV 204 (288)
T ss_pred ccCCccccCCCCcEEEEEEcc------ccCCCC-CCcEEEEeCC--CCCCcccCeE-EE-ECCEEEEEEecCCCCCCeEE
Confidence 54221 123344543322 112111 1221 11110 0112346888 44 6899999986432 222356
Q ss_pred EEEEeCCCC-CCEEc
Q 011094 283 LVYQTTDFK-TYELL 296 (494)
Q Consensus 283 ~lY~S~Dl~-~W~~~ 296 (494)
.+++|+++. -|+..
T Consensus 205 ~~~~s~~~~Gp~~~~ 219 (288)
T cd09000 205 TVARSRSITGPYEPA 219 (288)
T ss_pred EEEEeCCCCCCCccC
Confidence 788999876 56653
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.012 Score=58.15 Aligned_cols=164 Identities=19% Similarity=0.300 Sum_probs=97.3
Q ss_pred ccccceeeeecC--CCcccCCccceE-ECCEEEEEEeeCCCCCCCCCcEEEEEEecC-ccCeeecceeccCCCCcCCCcE
Q 011094 115 TWQRTSFHFQPE--KNWMNDPNGPLF-YKGWYHLFYQYNPDSAVWGNITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGV 190 (494)
Q Consensus 115 ~w~Rp~~Hf~P~--~gwmNDPNG~~y-~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~D-LvhW~~~p~AL~Pd~~~D~~Gv 190 (494)
.|..|+-=+.++ ..-..||. +++ .+|+.||||........|......+.+|+| ..+|.... .|.++......+.
T Consensus 31 tWs~~~~v~~~~~~~~~~~~p~-~~~~~~g~l~l~~~~~~~~~~~~~~~~~~~~S~D~G~TWs~~~-~l~~~~~~~~~~~ 108 (275)
T PF13088_consen 31 TWSEPRIVADGPKPGRRYGNPS-LVVDPDGRLWLFYSAGSSGGGWSGSRIYYSRSTDGGKTWSEPT-DLPPGWFGNFSGP 108 (275)
T ss_dssp EEEEEEEEETSTBTTCEEEEEE-EEEETTSEEEEEEEEEETTESCCTCEEEEEEESSTTSS-EEEE-EEHHHCCCSCEEC
T ss_pred eeCCCEEEeeccccCCcccCcE-EEEeCCCCEEEEEEEccCCCCCCceeEEEEEECCCCCCCCCcc-ccccccccceecc
Confidence 465565555555 33345786 555 499999999665554444444444599999 99999754 2333221223344
Q ss_pred EeeeEEEccCCeEEEE-EeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEE
Q 011094 191 WTGSATILPDGQIVML-YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWR 269 (494)
Q Consensus 191 ~SGSavv~~dG~~~~~-YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~ 269 (494)
..+.++...+|++++- |.. ........+.+|.|.+ ++|+... ++.. ....--|.+ ....+|+.+
T Consensus 109 ~~~~~i~~~~G~l~~~~~~~--~~~~~~~~~~~S~D~G----~tW~~~~--~~~~------~~~~~e~~~-~~~~dG~l~ 173 (275)
T PF13088_consen 109 GRGPPIQLPDGRLIAPYYHE--SGGSFSAFVYYSDDGG----KTWSSGS--PIPD------GQGECEPSI-VELPDGRLL 173 (275)
T ss_dssp SEEEEEEECTTEEEEEEEEE--SSCEEEEEEEEESSTT----SSEEEEE--ECEC------SEEEEEEEE-EEETTSEEE
T ss_pred ceeeeeEecCCCEEEEEeec--cccCcceEEEEeCCCC----ceeeccc--cccc------cCCcceeEE-EECCCCcEE
Confidence 5555566679987775 443 1223566788999986 8998752 2210 012224555 334788888
Q ss_pred EEEeeecCCeeEEEEEEeCC-CCCCEEcC
Q 011094 270 LTIGSKIGKTGISLVYQTTD-FKTYELLD 297 (494)
Q Consensus 270 MviGa~~~~~G~v~lY~S~D-l~~W~~~~ 297 (494)
|++... . .+.+.+++|.| ..+|+...
T Consensus 174 ~~~R~~-~-~~~~~~~~S~D~G~TWs~~~ 200 (275)
T PF13088_consen 174 AVFRTE-G-NDDIYISRSTDGGRTWSPPQ 200 (275)
T ss_dssp EEEEEC-S-STEEEEEEESSTTSS-EEEE
T ss_pred EEEEcc-C-CCcEEEEEECCCCCcCCCce
Confidence 887653 2 22667788877 79999743
|
... |
| >COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00093 Score=72.84 Aligned_cols=140 Identities=24% Similarity=0.385 Sum_probs=81.3
Q ss_pred EEEEecCccCeeecceeccCCCCc-------CCCcEEeeeEEEccCCeEEEEEeccCCCc---cceEEEEEEcCCCCCCc
Q 011094 162 GHAVSADLIHWLYLPIAMVPDQWY-------DINGVWTGSATILPDGQIVMLYTGSTDKS---VQVQNLAYPADPSDPLL 231 (494)
Q Consensus 162 GHA~S~DLvhW~~~p~AL~Pd~~~-------D~~Gv~SGSavv~~dG~~~~~YTG~~~~~---~q~q~lA~S~D~~d~lL 231 (494)
.-+.|+||+||+...-.|.+...+ +..|||..++. .+||+++|+||-..... ....+..++.+..+
T Consensus 56 ~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~~S~giWAPdl~-y~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~--- 131 (549)
T COG3507 56 AIHHSRDLVNWTLVSTPLIRTSQLDLKGNFPYSGGIWAPDLS-YHDGKFWLYYTDVKRSGGPYKNAGNYLVTAESID--- 131 (549)
T ss_pred eeeccccccCcEEecccccCcchhhhhcccCCCCceecccee-cCCCcEEEEEecccccCCcccccccEEEEecCCC---
Confidence 347799999999887655554321 46789999986 79999999998764321 22223334433211
Q ss_pred ceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCC------eeEEEEEEeCCCCCCEEcCc----ccc
Q 011094 232 LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK------TGISLVYQTTDFKTYELLDE----YLH 301 (494)
Q Consensus 232 ~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~------~G~v~lY~S~Dl~~W~~~~~----ll~ 301 (494)
..|.. |+..+-. .--||.+++ ++||+-||+.|+.... .|+++ .-.|-+.-.+.+. ++.
T Consensus 132 G~WsD----pi~l~~~-----~~iDPslf~-D~dGr~wlv~~~w~~~~~~~~~~~i~l--~~~~~~~~~l~g~~~~~~~~ 199 (549)
T COG3507 132 GPWSD----PIKLNGS-----NAIDPSLFF-DKDGRKWLVNGSWDGGIFMHSFAGIIL--QEYDKTTQKLVGQGYKIIFD 199 (549)
T ss_pred CCccc----ceecCCc-----CccCCceee-cCCCCEEEEecccCCCcccccccceee--eeccccccccCCccceeEec
Confidence 35643 3333221 134999954 6889999999875321 23433 3333333333333 222
Q ss_pred cCCCCCceEeccEEEec
Q 011094 302 AVPGTGMWECVDFYPVA 318 (494)
Q Consensus 302 ~~~~~gmwECPdlf~l~ 318 (494)
. ...+..|-|-+++.+
T Consensus 200 G-~~~~~~EGPhl~k~~ 215 (549)
T COG3507 200 G-GNGGLTEGPHLYKKT 215 (549)
T ss_pred c-CCCccccCceeeccC
Confidence 1 112367888777664
|
|
| >PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.027 Score=56.04 Aligned_cols=208 Identities=15% Similarity=0.231 Sum_probs=105.7
Q ss_pred eeeeecCCCcc--cCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEE-
Q 011094 120 SFHFQPEKNWM--NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSAT- 196 (494)
Q Consensus 120 ~~Hf~P~~gwm--NDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSav- 196 (494)
.--.+|+.||. .||- .++++|+||+|....-.+..||-|. =.-+-+|....-|= +-|-..+.-...+.
T Consensus 13 g~L~~Pk~g~~slKD~T-~V~ynGk~~VyAtt~d~~~~y~sm~-----f~~Ftdws~~~sA~---q~~m~~~~vAP~vFY 83 (271)
T PF03664_consen 13 GPLAQPKSGWVSLKDFT-IVPYNGKHHVYATTADTGGGYGSMN-----FGPFTDWSQMASAS---QNYMDQSAVAPQVFY 83 (271)
T ss_pred CccccCCCCceeccCce-EEeECCEEEEEEEeccCCCccceEe-----eeccCCHHHhhccc---cccCCcccccceEEE
Confidence 34456888884 6997 8999999999998764444444333 33455677655331 11111111122222
Q ss_pred EccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCC-CCCCCCCCCCCeeEeecCCCeEEEEEeee
Q 011094 197 ILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP-RHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (494)
Q Consensus 197 v~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p-~g~~~~~fRDP~V~w~~~dg~w~MviGa~ 275 (494)
..+...+||.|--... .-...++.|.++| ..|... .|+.... .+ .....-|..|+- ++..-||+...
T Consensus 84 FaPk~~W~L~yQwg~~----~fsY~Ts~Dptnp--ngWSap--q~lf~g~i~~-~~~g~iD~~vI~--D~~n~yLFfa~- 151 (271)
T PF03664_consen 84 FAPKNIWYLAYQWGPA----AFSYSTSSDPTNP--NGWSAP--QPLFSGSISG-SGTGPIDQWVIC--DDTNMYLFFAG- 151 (271)
T ss_pred ecCCcEEEEEEecCCC----cceeecCCCCCCC--ccCCCC--cccccccccC-CCCCceeeEEEe--cCCceEEEEcC-
Confidence 2467888888863211 1123345666665 468763 3453321 11 123457998874 23334444432
Q ss_pred cCCeeEEEEEEeCC-CCC----CEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCCceeEE
Q 011094 276 IGKTGISLVYQTTD-FKT----YELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHY 350 (494)
Q Consensus 276 ~~~~G~v~lY~S~D-l~~----W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~~~~~Y 350 (494)
+ .|. ||||.= +-+ +.-...+.........+|.++.|+|.+. .+++|.+..-+..+.||
T Consensus 152 D--nGk--iYRs~~~i~nFP~~fgs~~~vvmsd~~~nLFEA~~VYkv~G~-------------~~YLmiVEaiGs~gRyF 214 (271)
T PF03664_consen 152 D--NGK--IYRSSMPIGNFPGGFGSSYTVVMSDTRNNLFEAVQVYKVKGQ-------------NQYLMIVEAIGSDGRYF 214 (271)
T ss_pred C--CCc--EEEeccchhhCCCCCCCceEEEEecCccceeeeeEEEEEcCC-------------ceEEEEEEEecCCCcEE
Confidence 2 254 688742 122 1100111111223348999999999632 25555554433333443
Q ss_pred EEEEecCCCCcccCC
Q 011094 351 AIGTYNPANDKWTPD 365 (494)
Q Consensus 351 ~iG~~d~~~~~f~p~ 365 (494)
.-=+=..-+|.|+|-
T Consensus 215 RSfTa~sL~G~Wtp~ 229 (271)
T PF03664_consen 215 RSFTATSLDGPWTPQ 229 (271)
T ss_pred EeeecCCCCCcceec
Confidence 322222234578764
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process |
| >cd08982 GH43_3 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.019 Score=58.73 Aligned_cols=134 Identities=15% Similarity=0.192 Sum_probs=74.5
Q ss_pred CCcccCCccceEE-CCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceecc----CCCCcC----------CCcEE
Q 011094 127 KNWMNDPNGPLFY-KGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV----PDQWYD----------INGVW 191 (494)
Q Consensus 127 ~gwmNDPNG~~y~-~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~----Pd~~~D----------~~Gv~ 191 (494)
..+.-||+ ++.+ +|+.+|+|-..- ++ ..++---+.|+..=.-.+..|. |+..|. ..++.
T Consensus 88 ~~~~IDp~-vf~DdDGk~Yl~~g~~~----~~-~i~~~eL~~d~~~~~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~~ 161 (295)
T cd08982 88 PPGLADPA-LFIDDDGRLYLYYGCSN----NY-PLRGVEVDPDTFRPIGEPVELIPGNPDKHGWERFGENNDNPDKTPWM 161 (295)
T ss_pred CCCccCCc-eEECCCCCEEEEEecCC----CC-CeEEEEECcccCCccCcceEEEeCCCCCcCeEecCcccccccCCccc
Confidence 45677997 6665 499999984211 11 1233333445442222222221 111111 23466
Q ss_pred eeeEEEccCCeEEEEEeccCCC-ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEE
Q 011094 192 TGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRL 270 (494)
Q Consensus 192 SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~M 270 (494)
-|..+...+|+++|+|++.... ....+.+|+|++. +.-|++...|||+..+.+. ...--...+ +...+|+|++
T Consensus 162 EGP~i~k~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p----~GP~~~~~~~pil~~~~~~-~~g~GH~s~-v~~~~G~~~~ 235 (295)
T cd08982 162 EGAWMTKHNGKYYLQYAAPGTEFNTYADGVYVSDSP----LGPFTYQPHNPFSYKPGGF-ITGAGHGST-FQDKYGNYWH 235 (295)
T ss_pred cccEEEEECCEEEEEEeCCCcccCcEeEEEEEeCCC----CCCCCcCCCCccccCCCCe-EecCCcccE-EECCCCCEEE
Confidence 7888877899999999865322 2235678888764 4678777678887644321 001112234 3456788887
Q ss_pred EE
Q 011094 271 TI 272 (494)
Q Consensus 271 vi 272 (494)
+.
T Consensus 236 ~y 237 (295)
T cd08982 236 VG 237 (295)
T ss_pred EE
Confidence 75
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure [] | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.038 Score=56.68 Aligned_cols=139 Identities=20% Similarity=0.282 Sum_probs=90.0
Q ss_pred cCCccccccccceeeeecCCCcccCCccc-----eEECCEEEEEEeeCCCCCCCCCcEEEEEEe-cCccCeeecc---ee
Q 011094 108 NWTNAMFTWQRTSFHFQPEKNWMNDPNGP-----LFYKGWYHLFYQYNPDSAVWGNITWGHAVS-ADLIHWLYLP---IA 178 (494)
Q Consensus 108 ~~~~~~~~w~Rp~~Hf~P~~gwmNDPNG~-----~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S-~DLvhW~~~p---~A 178 (494)
.-+..++.|++...=+.|... .|.+|+ +.+++.+++||.-+-.. +...-..|+| +|.+||+..+ ++
T Consensus 43 a~S~Dlv~W~~~~~aL~P~~~--~d~~g~~SGs~~~~~~~~~~~YTg~~~~---~~~~q~~A~s~d~~~~w~k~~~~~pv 117 (308)
T PF00251_consen 43 ATSKDLVHWEHLPVALPPDEE--YDADGCFSGSAVVDDDNLVLFYTGNNRD---GKQVQCLAYSTDDGITWTKYPQGNPV 117 (308)
T ss_dssp EEESSSSSEEEEEEEE-SSSG--GGTTEEEEEEEEEETTCEEEEEEEEETT---TEEEEEEEEESSTTSSEEE-TTTCES
T ss_pred EECCCCCCceeCCceEccccc--CCcCccCcceEEEECCEEEEEEeccCCC---CCeEEEEEEECCCCCceEEcCCCCcE
Confidence 345667889777766667643 477773 33578999999866442 1345678999 8899999843 44
Q ss_pred ccCCCCcCCCcEEeeeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCe
Q 011094 179 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPT 258 (494)
Q Consensus 179 L~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~ 258 (494)
|......+..+.-+..++...+|+++|+..+... ....+.+..|+|+ ++|+.. .++...... ....|-.|-
T Consensus 118 i~~~p~~~~~~~RDP~v~~~~~~~~~m~~g~~~~-~~g~i~~y~S~Dl-----~~W~~~--~~l~~~~~~-~g~~~ECPd 188 (308)
T PF00251_consen 118 IPEPPPGDTTDFRDPKVFWREDGRWYMLLGAGRD-GRGCILLYTSDDL-----IHWEYL--GPLFIPGDN-GGGMWECPD 188 (308)
T ss_dssp BESSSTTSCTSEEEEEEEEECTTEEEEEEEEEET-TEEEEEEEEESSS-----SSEEEE--EEESEEETT-TSSEEEEEE
T ss_pred EEecccCCCCccccCeEEEecCCEEEEEEecccc-CcceEEEEEcCCc-----ccCcee--Ccccccccc-cccccccce
Confidence 4422222567788888866778999999877654 3445667788774 899986 344333221 123556777
Q ss_pred eE
Q 011094 259 TA 260 (494)
Q Consensus 259 V~ 260 (494)
++
T Consensus 189 lf 190 (308)
T PF00251_consen 189 LF 190 (308)
T ss_dssp EE
T ss_pred EE
Confidence 74
|
; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A .... |
| >PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.1 Score=51.57 Aligned_cols=146 Identities=18% Similarity=0.093 Sum_probs=79.6
Q ss_pred CEEEEEEeeCCCCCCCCCcEEEEEEe--cCc-cCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEeccCCC---c
Q 011094 141 GWYHLFYQYNPDSAVWGNITWGHAVS--ADL-IHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK---S 214 (494)
Q Consensus 141 G~YHLFYQ~nP~~~~wg~~~WGHA~S--~DL-vhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~---~ 214 (494)
|+...|+.- +...+.....-.+| +|. .+|...-....+. .....+..++++.+++|++++||+..... .
T Consensus 1 G~l~a~~~~---~~~~~~~d~~i~~S~s~D~G~tWs~~~~v~~~~--~~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~~ 75 (275)
T PF13088_consen 1 GRLLAVWEG---GSDEGAIDIVIRRSRSTDGGKTWSEPRIVADGP--KPGRRYGNPSLVVDPDGRLWLFYSAGSSGGGWS 75 (275)
T ss_dssp SEEEEEEEE---SSCSCCEEEEEEEECCCCCTTEEEEEEEEETST--BTTCEEEEEEEEEETTSEEEEEEEEEETTESCC
T ss_pred CeEEEEEEC---CcccCCCCEEEEEEEeeCCCCeeCCCEEEeecc--ccCCcccCcEEEEeCCCCEEEEEEEccCCCCCC
Confidence 556666665 23334444444445 886 7898755444333 12355777877777899999999544322 1
Q ss_pred cceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEEeCC-CCCC
Q 011094 215 VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTD-FKTY 293 (494)
Q Consensus 215 ~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~D-l~~W 293 (494)
.......+|.|.+ ++|.... .|...+........+.+-+. -.+|++++..-........+.++.|+| .+.|
T Consensus 76 ~~~~~~~~S~D~G----~TWs~~~--~l~~~~~~~~~~~~~~~~i~--~~~G~l~~~~~~~~~~~~~~~~~~S~D~G~tW 147 (275)
T PF13088_consen 76 GSRIYYSRSTDGG----KTWSEPT--DLPPGWFGNFSGPGRGPPIQ--LPDGRLIAPYYHESGGSFSAFVYYSDDGGKTW 147 (275)
T ss_dssp TCEEEEEEESSTT----SS-EEEE--EEHHHCCCSCEECSEEEEEE--ECTTEEEEEEEEESSCEEEEEEEEESSTTSSE
T ss_pred ceeEEEEEECCCC----CCCCCcc--ccccccccceeccceeeeeE--ecCCCEEEEEeeccccCcceEEEEeCCCCcee
Confidence 1222238999975 8999863 23222111111112333232 258887776322222334455556655 7999
Q ss_pred EEcCcc
Q 011094 294 ELLDEY 299 (494)
Q Consensus 294 ~~~~~l 299 (494)
+....+
T Consensus 148 ~~~~~~ 153 (275)
T PF13088_consen 148 SSGSPI 153 (275)
T ss_dssp EEEEEC
T ss_pred eccccc
Confidence 987554
|
... |
| >cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.19 Score=51.51 Aligned_cols=143 Identities=12% Similarity=0.154 Sum_probs=78.3
Q ss_pred cCCccceEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCccC---eeecceeccCCCCcCCCcEEeeeEEEccCCeEEE
Q 011094 131 NDPNGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLIH---WLYLPIAMVPDQWYDINGVWTGSATILPDGQIVM 205 (494)
Q Consensus 131 NDPNG~~y~--~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvh---W~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~ 205 (494)
--|. ++|+ +++|+||||+.+ ...++|+|..+ |....+.......-...|..+-.+ +..|++.||
T Consensus 79 wAPq-Vfyf~pk~kwYL~Yq~~~---------~~yaTs~dp~~P~~ws~~qpl~~~~~~~~~~~~ID~~v-I~Dd~~~YL 147 (303)
T cd08987 79 VAPQ-VFYFAPQNKWYLIYQWWP---------AAYSTNSDISNPNGWSAPQPLFSGTPNGSPGGWIDFWV-ICDDTNCYL 147 (303)
T ss_pred ccCE-EeeeccCCEEEEEEecCc---------eEEEeCCCCCCCCccCCCcccccCcccCCCCCccceeE-EeCCCCEEE
Confidence 3676 6655 599999999632 46899999765 664433222211112234455566 567999999
Q ss_pred EEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCC--eEEEEEeeecCCee-EE
Q 011094 206 LYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDG--KWRLTIGSKIGKTG-IS 282 (494)
Q Consensus 206 ~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg--~w~MviGa~~~~~G-~v 282 (494)
|+.+... .+..|-... .+|-....+.+....++....-|--|.| ++ .+| +|+|++-+.....+ -.
T Consensus 148 ff~~dnG----~iyra~~~~------~nFp~~~~~~~~~~~~~~~~~lfEa~~V-yk-v~G~~~YlmiveA~g~~~~rYf 215 (303)
T cd08987 148 FFSDDNG----KLYRSSTTL------GNFPNGGTETVIIMSDSNKNNLFEASNV-YK-VKGQNQYLLIVEAIGSDGGRYF 215 (303)
T ss_pred EEecCCC----eEEEEecch------hhCCCCCCccEEEecCCCccccceeeEE-EE-ECCCeEEEEEEEecCCCCCCeE
Confidence 9988532 333442221 1222211122222111111234678888 55 445 99999977532122 12
Q ss_pred EEEEeCCC-CCCEEc
Q 011094 283 LVYQTTDF-KTYELL 296 (494)
Q Consensus 283 ~lY~S~Dl-~~W~~~ 296 (494)
.-++|+.+ -.|+..
T Consensus 216 rs~Ts~Sl~GpWt~~ 230 (303)
T cd08987 216 RSWTATSLDGPWTPL 230 (303)
T ss_pred EEEEcCCCCCCceec
Confidence 23667776 468865
|
The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr |
| >cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions | Back alignment and domain information |
|---|
Probab=93.30 E-value=11 Score=38.74 Aligned_cols=146 Identities=15% Similarity=0.166 Sum_probs=82.1
Q ss_pred CcEEEEEEecC-ccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEeccCCC----------ccceEEEEEEcCC
Q 011094 158 NITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK----------SVQVQNLAYPADP 226 (494)
Q Consensus 158 ~~~WGHA~S~D-LvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~----------~~q~q~lA~S~D~ 226 (494)
.+....+.|.| ..+|...- ++..... ....++.++++.+.+|+++|||...... ....+.+.+|.|.
T Consensus 45 ~~~iv~~~S~D~G~tW~~~~-~i~~~~~-~~~~~~~p~~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~ 122 (351)
T cd00260 45 AIDIVARRSTDGGKTWSPST-VISDGDG-KSSRVKDPTVVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDD 122 (351)
T ss_pred ccceeEEEeccCCCcccccE-EehhcCC-CCCcEEcceEEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcC
Confidence 46677788887 68998853 4444322 2356788888775559999999865431 2345778889887
Q ss_pred CCCCcceEEEcCCCceecCC--CCCCCCCCCCC--eeEeecCCCeEEEEEeeecC--CeeEEEEEEeCCCCCCEEcCccc
Q 011094 227 SDPLLLDWVKYPGNPVLVPP--RHIGPKDFRDP--TTAWAGPDGKWRLTIGSKIG--KTGISLVYQTTDFKTYELLDEYL 300 (494)
Q Consensus 227 ~d~lL~~W~K~~~nPVi~~p--~g~~~~~fRDP--~V~w~~~dg~w~MviGa~~~--~~G~v~lY~S~Dl~~W~~~~~ll 300 (494)
+ .+|.+.. .+.... ..+ ..-++-| -+. -.+|++++.+-.... ..-..++|..++.++|+.....
T Consensus 123 G----~tW~~p~--~l~~~~~~~~~-~~~~~~~g~gi~--l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G~tW~~~~~~- 192 (351)
T cd00260 123 G----ITWSSPR--DLTPSVKGDNW-AALFTGPGSGIQ--MKDGRLVFPVYGGNAGGRVSSAIIYSDDSGKTWKLGEGV- 192 (351)
T ss_pred C----ceecCCc--cCCccccCcce-eEEEecCcCeEE--ecCCcEEEEEEEEcCCCCEEEEEEEECCCCCCcEECCCC-
Confidence 5 8997631 222111 111 1112233 221 247888776644322 1223445555557999864322
Q ss_pred ccCCCCCceEeccEEEec
Q 011094 301 HAVPGTGMWECVDFYPVA 318 (494)
Q Consensus 301 ~~~~~~gmwECPdlf~l~ 318 (494)
.. ..++.| |.++++.
T Consensus 193 ~~--~~~~~e-~~i~el~ 207 (351)
T cd00260 193 ND--AGGCSE-CSVVELS 207 (351)
T ss_pred CC--CCCCcC-CEEEEec
Confidence 11 123456 5577775
|
They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. |
| >PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A | Back alignment and domain information |
|---|
Probab=93.15 E-value=0.42 Score=49.57 Aligned_cols=91 Identities=25% Similarity=0.466 Sum_probs=51.7
Q ss_pred eeEEEccCCeEEEEEeccCCCcc-ceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeE-eecCCCeEEE
Q 011094 193 GSATILPDGQIVMLYTGSTDKSV-QVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA-WAGPDGKWRL 270 (494)
Q Consensus 193 GSavv~~dG~~~~~YTG~~~~~~-q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~-w~~~dg~w~M 270 (494)
||.|+.+||.+++=-.+...+.. .+-.|-||.|.+ .+|+-..+. .....+||.|+ | ++|+-.|
T Consensus 124 GSGV~m~dGTLVFPv~a~~~~~~~~~SlIiYS~d~g----~~W~lskg~---------s~~gC~~psv~EW--e~gkLlM 188 (310)
T PF13859_consen 124 GSGVVMEDGTLVFPVQATKKNGDGTVSLIIYSTDDG----KTWKLSKGM---------SPAGCSDPSVVEW--EDGKLLM 188 (310)
T ss_dssp EE-EE-TTS-EEEEEEEEETT---EEEEEEEESSTT----SS-EE-S-------------TT-EEEEEEEE---TTEEEE
T ss_pred CCceEEcCCCEEEEEeeeccCccceEEEEEEECCCc----cceEecccc---------CCCCcceEEEEec--cCCeeEE
Confidence 44556689998877676655555 377888999865 899875321 12356899997 5 4788888
Q ss_pred EEeeecCCeeEEEEEEeCCC-CCCEEcCcccc
Q 011094 271 TIGSKIGKTGISLVYQTTDF-KTYELLDEYLH 301 (494)
Q Consensus 271 viGa~~~~~G~v~lY~S~Dl-~~W~~~~~ll~ 301 (494)
+.... .|.--+|+|.|. ..|+..-.-+.
T Consensus 189 ~~~c~---~g~rrVYeS~DmG~tWtea~gtls 217 (310)
T PF13859_consen 189 MTACD---DGRRRVYESGDMGTTWTEALGTLS 217 (310)
T ss_dssp EEE-T---TS---EEEESSTTSS-EE-TTTTT
T ss_pred EEecc---cceEEEEEEcccceehhhccCccc
Confidence 75532 255568999985 88997444443
|
|
| >COG3940 Predicted beta-xylosidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.51 E-value=0.93 Score=44.63 Aligned_cols=111 Identities=26% Similarity=0.504 Sum_probs=68.9
Q ss_pred cccCCccceEECC-EEEEEEeeCCCCCCCCCcEEEEEEecCccCeeec--ceecc-CCCCcCCCcEE--eeeEEEccCCe
Q 011094 129 WMNDPNGPLFYKG-WYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYL--PIAMV-PDQWYDINGVW--TGSATILPDGQ 202 (494)
Q Consensus 129 wmNDPNG~~y~~G-~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~--p~AL~-Pd~~~D~~Gv~--SGSavv~~dG~ 202 (494)
+.=|-. .++++| .|+++-|..|+-. |+...-.|.-.+ -|+-. |+.|. |.-.|+..|.| .|-||+.++|+
T Consensus 131 fsldat-tfeh~gk~yyvwaqkdp~i~--gnsniyiaemen--pwtikgepvmlskpe~dwe~~gfwvnegpav~k~ngk 205 (324)
T COG3940 131 FSLDAT-TFEHNGKLYYVWAQKDPNIK--GNSNIYIAEMEN--PWTIKGEPVMLSKPELDWEIKGFWVNEGPAVLKKNGK 205 (324)
T ss_pred ceeeee-eeeeCCEEEEEEeccCCCcc--CCcceEEEeccC--CceecCceEEecCCCcccEEEEEEecCCceEEEECCE
Confidence 333543 567777 6888889888654 444444454444 36544 44443 33356667765 68888889999
Q ss_pred EEEEEeccCCCccceEEEEEEcCCCCCC-cceEEEcCCCceecC
Q 011094 203 IVMLYTGSTDKSVQVQNLAYPADPSDPL-LLDWVKYPGNPVLVP 245 (494)
Q Consensus 203 ~~~~YTG~~~~~~q~q~lA~S~D~~d~l-L~~W~K~~~nPVi~~ 245 (494)
+.+-|.....+-.-+.++-+....+|.+ -.+|+|.+ .||+..
T Consensus 206 ifi~ysasatd~nycmgllwanen~dlldpaswtksp-tpvf~t 248 (324)
T COG3940 206 IFITYSASATDVNYCMGLLWANENSDLLDPASWTKSP-TPVFKT 248 (324)
T ss_pred EEEEEeccccccceeeeeeeecccCCcCCchhcccCC-Ccceee
Confidence 9999998765544455555543333221 15899964 788764
|
|
| >PF13810 DUF4185: Domain of unknown function (DUF4185) | Back alignment and domain information |
|---|
Probab=85.34 E-value=21 Score=37.22 Aligned_cols=157 Identities=20% Similarity=0.202 Sum_probs=87.4
Q ss_pred CCccceEECCEEEEEEeeCCC----CCCCCCcEEEEEEecC-ccCeeecceeccCCCCcCCCcE------EeeeEEEccC
Q 011094 132 DPNGPLFYKGWYHLFYQYNPD----SAVWGNITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGV------WTGSATILPD 200 (494)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~----~~~wg~~~WGHA~S~D-LvhW~~~p~AL~Pd~~~D~~Gv------~SGSavv~~d 200 (494)
=|.+.|-.+|+-+|.|...-. ...|.-..=+.|.|+| ..+|+..+..+.+.... ..|+ |--++....|
T Consensus 96 iPt~~I~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G~tW~~~~~~~~~~~~~-~~g~~~~~~~fq~~a~~~~d 174 (316)
T PF13810_consen 96 IPTDGISVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNGETWTVVPGTIRPNSPF-HPGFNQGNWNFQMAAFVKDD 174 (316)
T ss_pred cccceEEECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCCCCceeCCCcccccccc-cCCccccccccccccccCCC
Confidence 488888889999999975421 1123222347899999 88999998666555311 1111 2222333457
Q ss_pred CeEEEEEeccCCCccceEEEEEEc--CCCCCC------cce--EEEcCC--CceecCCCCCCCCCCCCCeeEeecCCCeE
Q 011094 201 GQIVMLYTGSTDKSVQVQNLAYPA--DPSDPL------LLD--WVKYPG--NPVLVPPRHIGPKDFRDPTTAWAGPDGKW 268 (494)
Q Consensus 201 G~~~~~YTG~~~~~~q~q~lA~S~--D~~d~l------L~~--W~K~~~--nPVi~~p~g~~~~~fRDP~V~w~~~dg~w 268 (494)
|-+|+|=|...+. ....||.-. +..|+. ... |.+... .||+..+ .---.|.|.+..|+|
T Consensus 175 gyVYv~gt~~~R~--g~~~LaRV~~~~i~d~~ayeyw~g~~~~W~~~~~~atpv~~~~-------vgElSv~~~~~~gk~ 245 (316)
T PF13810_consen 175 GYVYVYGTPFGRN--GGVYLARVPPDDILDRSAYEYWDGSGGGWSWGNPPATPVLPGP-------VGELSVRYNEYLGKW 245 (316)
T ss_pred CEEEEEeCCCCCC--CcEEEEEeCHHHCCChhhccccCCCCcccccCCCCccccccCC-------ccceEEEEeCCCCEE
Confidence 7677776654432 223444322 111110 112 654321 3555433 123356677778999
Q ss_pred EEEEeeecCCeeEEEEEEeCCCC-CCEEcCccc
Q 011094 269 RLTIGSKIGKTGISLVYQTTDFK-TYELLDEYL 300 (494)
Q Consensus 269 ~MviGa~~~~~G~v~lY~S~Dl~-~W~~~~~ll 300 (494)
+|+.... ..+.|.+.++++.. .|.....+.
T Consensus 246 Vl~~~~~--~~~~I~~RtA~~P~GpWs~~~~l~ 276 (316)
T PF13810_consen 246 VLSYFDA--GTGGIVLRTAPSPTGPWSEPKPLV 276 (316)
T ss_pred EEEEecc--cCCcEEEEecCCCCCCCCCCeeEE
Confidence 9997642 23567677788776 587544443
|
|
| >PTZ00334 trans-sialidase; Provisional | Back alignment and domain information |
|---|
Probab=84.83 E-value=6.3 Score=45.70 Aligned_cols=89 Identities=21% Similarity=0.365 Sum_probs=57.1
Q ss_pred eeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeE-eecCCCeEEEE
Q 011094 193 GSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA-WAGPDGKWRLT 271 (494)
Q Consensus 193 GSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~-w~~~dg~w~Mv 271 (494)
||.|+.+||.+++=-.+...++..+-.|-||.|. .+|+-..+ ....+.+||.|+ | ++|+-.|+
T Consensus 263 GSGI~medGTLVFPv~a~~~~g~~vslIiYS~d~-----g~W~ls~g---------~s~~gC~~P~I~EW--e~gkLlM~ 326 (780)
T PTZ00334 263 GSGVQMKDGTLVFPVEGTKKDGKAVSLIIYSSAT-----ESGNLSKG---------MSADGCSDPSVVEW--KEGKLMMM 326 (780)
T ss_pred cCeEEecCCeEEEEEEEEcCCCCEEEEEEEecCC-----CCeEEcCC---------CCCCCCCCCEEEEE--cCCeEEEE
Confidence 4445568999876555654445556678899885 35854322 222357899987 5 35787777
Q ss_pred EeeecCCeeEEEEEEeCCC-CCCEEcCccc
Q 011094 272 IGSKIGKTGISLVYQTTDF-KTYELLDEYL 300 (494)
Q Consensus 272 iGa~~~~~G~v~lY~S~Dl-~~W~~~~~ll 300 (494)
.... .|.--+|+|.|. ..|+..-.-+
T Consensus 327 t~C~---dG~RrVYES~DmG~tWtEAlGTL 353 (780)
T PTZ00334 327 TACD---DGRRRVYESGDKGDSWTEALGTL 353 (780)
T ss_pred EEeC---CCCEEEEEECCCCCChhhCCCcc
Confidence 6543 255568999995 7898654444
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 494 | ||||
| 3ugf_A | 546 | Crystal Structure Of A 6-Sst6-Sft From Pachysandra | 1e-147 | ||
| 2ac1_A | 541 | Crystal Structure Of A Cell-Wall Invertase From Ara | 1e-104 | ||
| 2xqr_A | 537 | Crystal Structure Of Plant Cell Wall Invertase In C | 1e-104 | ||
| 2oxb_A | 537 | Crystal Structure Of A Cell-Wall Invertase (E203q) | 1e-104 | ||
| 2qqv_A | 537 | Crystal Structure Of A Cell-Wall Invertase (E203a) | 1e-103 | ||
| 2qqu_A | 535 | Crystal Structure Of A Cell-Wall Invertase (D239a) | 1e-103 | ||
| 2qqw_A | 537 | Crystal Structure Of A Cell-Wall Invertase (D23a) F | 1e-103 | ||
| 1st8_A | 543 | Crystal Structure Of Fructan 1-Exohydrolase Iia Fro | 1e-100 | ||
| 2aez_A | 543 | Crystal Structure Of Fructan 1-Exohydrolase Iia (E2 | 1e-100 | ||
| 1uyp_A | 432 | The Three-Dimensional Structure Of Beta-Fructosidas | 7e-36 | ||
| 1w2t_A | 432 | Beta-Fructosidase From Thermotoga Maritima In Compl | 2e-35 | ||
| 1y9m_A | 518 | Crystal Structure Of Exo-Inulinase From Aspergillus | 1e-27 | ||
| 3pig_A | 526 | Beta-Fructofuranosidase From Bifidobacterium Longum | 3e-27 | ||
| 3kf5_A | 512 | Structure Of Invertase From Schwanniomyces Occident | 4e-21 | ||
| 3kf3_A | 509 | Structure Of Fructofuranosidase From Schwanniomyces | 4e-21 | ||
| 3sc7_X | 516 | First Crystal Structure Of An Endo-Inulinase, From | 1e-20 | ||
| 3u75_A | 535 | Structure Of E230a-Fructofuranosidase From Schwanni | 1e-20 | ||
| 3u14_A | 535 | Structure Of D50a-Fructofuranosidase From Schwannio | 4e-20 | ||
| 4ffg_A | 492 | Crystal Structure Of Levan Fructotransferase From A | 7e-07 | ||
| 4fff_A | 490 | Crystal Structure Of Levan Fructotransferase From A | 7e-07 | ||
| 4ffh_A | 492 | Crystal Structure Of Levan Fructotransferase D54n M | 2e-06 |
| >pdb|3UGF|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis Length = 546 | Back alignment and structure |
|
| >pdb|2AC1|A Chain A, Crystal Structure Of A Cell-Wall Invertase From Arabidopsis Thaliana Length = 541 | Back alignment and structure |
|
| >pdb|2XQR|A Chain A, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor Length = 537 | Back alignment and structure |
|
| >pdb|2OXB|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203q) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2QQV|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203a) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2QQU|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D239a) From Arabidopsis Thaliana In Complex With Sucrose Length = 535 | Back alignment and structure |
|
| >pdb|2QQW|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D23a) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|1ST8|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From Cichorium Intybus Length = 543 | Back alignment and structure |
|
| >pdb|2AEZ|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia (E201q) From Cichorium Intybus In Complex With 1-Kestose Length = 543 | Back alignment and structure |
|
| >pdb|1UYP|A Chain A, The Three-Dimensional Structure Of Beta-Fructosidase (Invertase) From Thermotoga Maritima Length = 432 | Back alignment and structure |
|
| >pdb|1W2T|A Chain A, Beta-Fructosidase From Thermotoga Maritima In Complex With Raffinose Length = 432 | Back alignment and structure |
|
| >pdb|1Y9M|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus Awamori In Spacegroup P212121 Length = 518 | Back alignment and structure |
|
| >pdb|3PIG|A Chain A, Beta-Fructofuranosidase From Bifidobacterium Longum Length = 526 | Back alignment and structure |
|
| >pdb|3KF5|A Chain A, Structure Of Invertase From Schwanniomyces Occidentalis Length = 512 | Back alignment and structure |
|
| >pdb|3KF3|A Chain A, Structure Of Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Fructose Length = 509 | Back alignment and structure |
|
| >pdb|3SC7|X Chain X, First Crystal Structure Of An Endo-Inulinase, From Aspergillus Ficuum: Structural Analysis And Comparison With Other Gh32 Enzymes. Length = 516 | Back alignment and structure |
|
| >pdb|3U75|A Chain A, Structure Of E230a-Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Fructosylnystose Length = 535 | Back alignment and structure |
|
| >pdb|3U14|A Chain A, Structure Of D50a-Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Inulin Length = 535 | Back alignment and structure |
|
| >pdb|4FFG|A Chain A, Crystal Structure Of Levan Fructotransferase From Arthrobacter Ureafaciens In Complex With Dfa-Iv Length = 492 | Back alignment and structure |
|
| >pdb|4FFF|A Chain A, Crystal Structure Of Levan Fructotransferase From Arthrobacter Ureafaciens Length = 490 | Back alignment and structure |
|
| >pdb|4FFH|A Chain A, Crystal Structure Of Levan Fructotransferase D54n Mutant From Arthrobacter Ureafaciens In Complex With Sucrose Length = 492 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 494 | |||
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 0.0 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 0.0 | |
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 0.0 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 1e-151 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 1e-145 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 1e-144 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 1e-135 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 1e-131 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 1e-126 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 2e-93 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 7e-15 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 4e-11 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 4e-10 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 6e-10 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 2e-09 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 6e-08 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 7e-07 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 3e-04 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 7e-04 |
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* Length = 546 | Back alignment and structure |
|---|
Score = 551 bits (1421), Expect = 0.0
Identities = 238/369 (64%), Positives = 299/369 (81%)
Query: 106 SYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAV 165
Y W+NA +WQRT+FHFQPE++WM+DP+GP+FYKGWYH FYQYNPD+ VWGN TWGH V
Sbjct: 7 PYPWSNAQLSWQRTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTV 66
Query: 166 SADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPAD 225
S DLIHWLYLP+A+ DQWYD+ GV++GSAT LPDG+I+MLYTG T + V++ +LAYPAD
Sbjct: 67 SRDLIHWLYLPLALAADQWYDMQGVFSGSATCLPDGRIMMLYTGVTKEMVEMLSLAYPAD 126
Query: 226 PSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVY 285
SDPLL++WVKYPGNP+L P + P +FRD +T W +G WR+ IG+K TGI++VY
Sbjct: 127 LSDPLLVEWVKYPGNPILSAPPGVSPTEFRDASTGWYVSNGTWRIAIGAKYNTTGIAMVY 186
Query: 286 QTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT 345
+T DFK+++LL+E LHAVP TG+WECVD YPV+ G GL+TS GP +KHVLKAS+D+
Sbjct: 187 ETKDFKSFKLLEELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDEQ 246
Query: 346 KVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINET 405
+ D+YAIGTY+ +KWTPDNPEEDVGIGL++D+G+YYASK+FYDP K+RR+VW W E
Sbjct: 247 QRDYYAIGTYDLGTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKEL 306
Query: 406 DTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVV 465
D+E D EKGWA+VQTIPRTVL D KTG+NV+ WPVEE+ESLR +S F +V GSVV
Sbjct: 307 DSEVADREKGWANVQTIPRTVLLDQKTGTNVLLWPVEEVESLRLSSKEFSKVKAGAGSVV 366
Query: 466 PLDIGVATQ 474
PLD+G ATQ
Sbjct: 367 PLDVGTATQ 375
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* Length = 541 | Back alignment and structure |
|---|
Score = 522 bits (1345), Expect = 0.0
Identities = 190/371 (51%), Positives = 247/371 (66%), Gaps = 7/371 (1%)
Query: 110 TNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADL 169
+ ++ RT FHFQP KNWMNDPNGP+ YKG YHLFYQ+NP AVWGNI W H+ S DL
Sbjct: 1 SPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDL 60
Query: 170 IHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDP 229
I+W P A+ P +DING W+GSATILP+G+ V+LYTG K+ QVQN+A P + SDP
Sbjct: 61 INWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDP 120
Query: 230 LLLDWVKYPGNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQT 287
L +W K P NP++ P I FRDPTTAW G D KWR+ IGSKI + G+++ Y +
Sbjct: 121 YLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTS 180
Query: 288 TDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGP---GIKHVLKASLDD 344
DF +E E LH G+GMWEC DF+PV GS G++TS+ G +KHVLK SLDD
Sbjct: 181 KDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDD 240
Query: 345 TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINE 404
TK D+Y IGTY+ DK+ PDN + G ++DYG+YYASK+F+D K RRI+WGW NE
Sbjct: 241 TKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNE 300
Query: 405 TDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTV-FEEVVVEPGS 463
+ + DD+EKGW+ +QTIPR + D ++G ++QWPV E+E LR V++ GS
Sbjct: 301 SSSVEDDVEKGWSGIQTIPRKIWLD-RSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGS 359
Query: 464 VVPLDIGVATQ 474
+ + A Q
Sbjct: 360 RLEVYGVTAAQ 370
|
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* Length = 543 | Back alignment and structure |
|---|
Score = 521 bits (1343), Expect = 0.0
Identities = 178/366 (48%), Positives = 244/366 (66%), Gaps = 6/366 (1%)
Query: 112 AMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGN-ITWGHAVSADLI 170
+ RT +HFQP NWMNDPNGP+ Y+G YH FYQYNP +A +G+ I WGHAVS DL+
Sbjct: 2 QIEQPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLV 61
Query: 171 HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPL 230
+W++L A+ P Q D W+GSATILP MLYTGS KS QVQ+LA+P + SDP
Sbjct: 62 NWIHLDPAIYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPF 121
Query: 231 LLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDF 290
L +WVK+P NP++ PP + FRDP+TAW GPDG WR+ +G G++ +YQ+TDF
Sbjct: 122 LREWVKHPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDF 181
Query: 291 KTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHY 350
++ D+ L + TG WEC DFYPV +N + GLDTS G ++HV+KA + D Y
Sbjct: 182 VNWKRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGFEGH--DWY 239
Query: 351 AIGTYNPANDKWTPDNPEEDVG--IGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTE 408
IGTY+P + + P N G + L++DYG++YASKSF+D K RR++W W+ ETD++
Sbjct: 240 TIGTYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQ 299
Query: 409 SDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLD 468
+DD+EKGWA +Q+ PR + D + G ++QWPVEEIE LRQN + ++PGSV+ +
Sbjct: 300 ADDIEKGWAGLQSFPRALWID-RNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIH 358
Query: 469 IGVATQ 474
A+Q
Sbjct: 359 GIAASQ 364
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* Length = 518 | Back alignment and structure |
|---|
Score = 440 bits (1134), Expect = e-151
Identities = 97/396 (24%), Positives = 154/396 (38%), Gaps = 52/396 (13%)
Query: 116 WQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYL 175
R +HF P+KNWMNDPNG L++ G YHLF+QYNP WGNI+WGHA+S DL HW
Sbjct: 6 PYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEK 65
Query: 176 PIAMVPDQWYD--INGVWTGSATILPDG----------QIVMLYTG------------ST 211
P+A++ + ++GSA + +V +YT +
Sbjct: 66 PVALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTV 125
Query: 212 DKSVQVQNLAYPADPSDPLLLDWVKYP-GNPVLVPPRH---IGPKDFRDPTTAWAGPDGK 267
+ Q Q++AY D L W Y NPV+ P ++FRDP W K
Sbjct: 126 QEDQQSQSIAYSLDD----GLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQK 181
Query: 268 WRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDT 327
W + I + +Y + + K ++L+ E+ G+WEC + ++
Sbjct: 182 WVVVTS--IAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDS------ 233
Query: 328 SATGPGIKHVLKASLDDTKV-------DHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG 380
G K V+ + L+ Y +G ++ D D+G
Sbjct: 234 ---GNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGTTFTPDADTVYPGNSTANWMDWG 290
Query: 381 R-YYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTV-LYDNKTGSNVVQ 438
+YA+ + + GW+N ++ W S IPR + L + + +VQ
Sbjct: 291 PDFYAAAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQ 350
Query: 439 WPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQ 474
P E S+ ++
Sbjct: 351 QPQEAWSSISNKRPIYSRTFKTLSEGSTNTTTTGET 386
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* Length = 526 | Back alignment and structure |
|---|
Score = 424 bits (1093), Expect = e-145
Identities = 102/380 (26%), Positives = 154/380 (40%), Gaps = 35/380 (9%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
+H W+NDPNG FYKG +H+FYQ +P WG + WGH S D+++W PI
Sbjct: 40 YPKYHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWGPMHWGHVSSTDMLNWKREPI 99
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTG--------STDKSVQVQNLAYPADPSDP 229
P + +GV++GSA I +G + YTG +T QVQ A P +
Sbjct: 100 MFAPSLEQEKDGVFSGSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQMTALPDNDE-- 157
Query: 230 LLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG-KTGISLVYQTT 288
++ P +RDP W +T G K G ++ +
Sbjct: 158 ---LTSATKQGMIIDCPTDKVDHHYRDPKVWK--TGDTWYMTFGVSSADKRGQMWLFSSK 212
Query: 289 DFKTYELLDEYL-HAVPGTGMWECVDFYPVAINGSVG---LDTSATGPGIKHVLKASLDD 344
D +E H P M EC DF P+ + SA G + ++ +
Sbjct: 213 DMVRWEYERVLFQHPDPDVFMLECPDFSPIKDKDGNEKWVIGFSAMGSKPSGFMNRNVSN 272
Query: 345 TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWIN 403
Y IGT+ P ++ P+ WD G YYA +SF R+IV+GW++
Sbjct: 273 A---GYMIGTWEP-GGEFKPETE------FRLWDCGHNYYAPQSFNV--DGRQIVYGWMS 320
Query: 404 ETDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGS 463
+ GW T+PR + + +VV PV E+E LR+++ V ++
Sbjct: 321 PFVQPIPMEDDGWCGQLTLPREITLGDDG--DVVTAPVAEMEGLREDTLDHGSVTLDMDG 378
Query: 464 VVPLDIGVATQVILHTISLK 483
+ I TI L
Sbjct: 379 EQIIADDAEAVEIEMTIDLA 398
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} Length = 516 | Back alignment and structure |
|---|
Score = 422 bits (1086), Expect = e-144
Identities = 89/415 (21%), Positives = 156/415 (37%), Gaps = 55/415 (13%)
Query: 98 HLLRNIKGSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWG 157
+ G + A R S+HF P++ WMN+PNG + +HLF+Q+NP + VWG
Sbjct: 9 MVWMTCLGLTLPSQAQSNDYRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWG 68
Query: 158 NITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDG----------QIVMLY 207
NI WGHA S DL+HW + P A+ + + +TG+A P+ + +
Sbjct: 69 NICWGHATSTDLMHWAHKPTAIADENGVEA---FTGTAYYDPNNTSGLGDSANPPYLAWF 125
Query: 208 TGSTDKS-VQVQNLAYPADPSDPLLLDWVKYPGNPVL-----VPPRHIGPKDFRDPTTAW 261
TG T S Q Q LA+ D W K+ GNP++ P G + RDP +
Sbjct: 126 TGYTTSSQTQDQRLAFSVDNG----ATWTKFQGNPIISTSQEAPHDITGGLESRDPKVFF 181
Query: 262 AGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPG-----TGMWECVDFYP 316
G W + + G + + D + + WE D +
Sbjct: 182 HRQSGNWIMVLAH--GGQDKLSFWTSADTINWTWQSDLKSTSINGLSSDITGWEVPDMFE 239
Query: 317 VAINGSVGLDTSATGPGIKHVLKASLDDTKVD-----HYAIGTYNPANDKWTPDNPEEDV 371
+ + G+ V+ + + G+++ + P +
Sbjct: 240 LPVEGT---------EETTWVVMMTPAEGSPAGGNGVLAITGSFDGKSFTADPVDAS--- 287
Query: 372 GIGLKWDYG-RYYASKSFYD--PYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTV-L 427
+ D G + + S+ + RRI+ +N + W + + PRT+ L
Sbjct: 288 --TMWLDNGRDFDGALSWVNVPASDGRRIIAAVMNSYGSNPPT--TTWKGMLSFPRTLSL 343
Query: 428 YDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQVILHTISL 482
T + VQ P+ E++++ + + + PG + I +
Sbjct: 344 KKVGTQQHFVQQPITELDTISTSLQILANQTITPGQTLLSSIRGTALDVRVAFYP 398
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* Length = 432 | Back alignment and structure |
|---|
Score = 395 bits (1017), Expect = e-135
Identities = 110/380 (28%), Positives = 178/380 (46%), Gaps = 53/380 (13%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
+ ++HF P WMNDPNG +F+KG YH+FYQYNP WGNI WGHAVS DL+HW +LP+
Sbjct: 3 KPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPV 62
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKS-----VQVQNLAYPADPSDPLLL 232
A+ PD + +GV++GSA + DG++ ++YT D + + Q + + L
Sbjct: 63 ALYPDD--ETHGVFSGSA-VEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSEN-----GL 114
Query: 233 DWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISLVYQTTDFK 291
D+VKY GNPV+ P G FRDP +G+WR+ +GS K G L+Y + D
Sbjct: 115 DFVKYDGNPVISKPPEEGTHAFRDPKVNR--SNGEWRMVLGSGKDEKIGRVLLYTSDDLF 172
Query: 292 TYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYA 351
++ + T +C D + G K +L S+ T ++
Sbjct: 173 HWKYEGA-IFEDETTKEIDCPDLVRI---------------GEKDILIYSITSTNSVLFS 216
Query: 352 IGTYNPANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWINETDTES- 409
+G K + D+G +YA+++F+ R +V GW+
Sbjct: 217 MGELKE--GKLNVEKRGL-------LDHGTDFYAAQTFFGT--DRVVVIGWLQSWLRTGL 265
Query: 410 -DDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLD 468
+GW V ++PR + +N + PV+E+ +LR+ + LD
Sbjct: 266 YPTKREGWNGVMSLPRELYVENN---ELKVKPVDELLALRKR----KVFETAKSGTFLLD 318
Query: 469 IGVATQVILHTISLKLLVTL 488
+ + I+ S ++ + +
Sbjct: 319 VKENSYEIVCEFSGEIELRM 338
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A Length = 492 | Back alignment and structure |
|---|
Score = 389 bits (1000), Expect = e-131
Identities = 78/382 (20%), Positives = 143/382 (37%), Gaps = 50/382 (13%)
Query: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV 180
+H P W+ +P P+ G Y L+Y ++ + G W HA + D + + + M
Sbjct: 4 YHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQN--NGPGGWDHASTTDGVAFTHHGTVMP 61
Query: 181 PDQWYDINGVWTGSATI-------LPDGQIVMLYTGSTD--KSVQVQNLAYPADP----- 226
+ + W+GSA + G +V L T TD + Q Q L + D
Sbjct: 62 LRPDFPV---WSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGGFTFT 118
Query: 227 --SDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLV 284
DP++++ G P + FRDP W G+W IG +
Sbjct: 119 ALPDPVIVNT---DGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVIGRL----RYAAF 171
Query: 285 YQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344
Y + + + + L + + G EC D + + + VL AS+D
Sbjct: 172 YTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITAD----------DGTRHWVLAASMDA 221
Query: 345 TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGR-YYASKSF--YDPYKKRRIVWGW 401
+ Y W + D D+G +YA+ ++ D + +R+ W
Sbjct: 222 YGIGLPMTYAY--WTGTWDGEQFHADDLTPQWLDWGWDWYAAVTWPSIDAPETKRLAIAW 279
Query: 402 INETDTESDDL----EKGWASVQTIPRTVLYDNKTGS--NVVQWPVEEIESLRQNSTVFE 455
+N + D+ G+ +I R + + G ++ PV + + +T
Sbjct: 280 MNNWKYAARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYVTATTTLP 339
Query: 456 EVVVEPGSVVPLDIGVATQVIL 477
+ V+ +V+P + G A ++ L
Sbjct: 340 DRTVDGSAVLPWN-GRAYEIEL 360
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* Length = 509 | Back alignment and structure |
|---|
Score = 377 bits (970), Expect = e-126
Identities = 87/398 (21%), Positives = 157/398 (39%), Gaps = 59/398 (14%)
Query: 116 WQRTSFHFQPEKNWMNDPNGPLFYK--GWYHLFYQYNPDSAVWGN-ITWGHAVSADLIHW 172
+ R HF PEK WMNDPNG + K +HL++QYNP++ WG + WGHA S DL+HW
Sbjct: 8 YNRPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDLVHW 67
Query: 173 LYLPIAMVPDQWYDINGVWTGSATILPDG-------------QIVMLYTGSTDKSVQVQN 219
IA+ P+ +D G+++GS + + +IV +YT + + Q Q+
Sbjct: 68 DEHEIAIGPE--HDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPDN-QTQD 124
Query: 220 LAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT 279
+A+ D + KY NPV+ FRDP W +W + + +
Sbjct: 125 IAFSLDGG----YTFTKYENNPVIDVS----SNQFRDPKVFWHEDSNQWIMVVSK--SQE 174
Query: 280 GISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLK 339
++ + + K + L + G +EC V I K V+
Sbjct: 175 YKIQIFGSANLKNWVLNSNFSSGYYG-NQYECPGLIEVPIEN---------SDKSKWVMF 224
Query: 340 ASL-----DDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYK 393
++ ++ Y +G ++ ++ PD+ + D G+ +YA ++F + +
Sbjct: 225 LAINPGSPLGGSINQYFVGDFD--GFQFVPDDSQ-----TRFVDIGKDFYAFQTFSEV-E 276
Query: 394 KRRIVWGWINETDTESDDLEKGWASVQTIPRTV------LYDNKTGSNVVQWPVEEIESL 447
+ W + W S ++ R ++Q PV
Sbjct: 277 HGVLGLAWASNWQYADQVPTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNPVLPDSIN 336
Query: 448 RQNSTVFEEVVVEPGSVVPLDIGVATQVILHTISLKLL 485
+ + V + + + +T + I+ K+L
Sbjct: 337 VVDKLKKKNVKLTNKKPIKTNFKGSTGLFDFNITFKVL 374
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* Length = 634 | Back alignment and structure |
|---|
Score = 295 bits (757), Expect = 2e-93
Identities = 61/462 (13%), Positives = 123/462 (26%), Gaps = 95/462 (20%)
Query: 111 NAMFTWQRTSFHFQPEKNWMNDPNGPLF--YKGWYHLFYQYNPDSAVWGNITWGHAVSAD 168
N +F R H P + + DP G +H+ + ++ D A +A+
Sbjct: 20 NTLFHLWRPRAHILPAEGQIGDPCAHYTDPSTGLFHVGFLHDGDG-------IAGATTAN 72
Query: 169 LIHWLYL----PIAMVPDQWYDINGVWTGSAT-ILPDGQIVMLYTGSTD----------K 213
L + + P D V+ G+ + + +LYT + +
Sbjct: 73 LATYTDTSDNGSFLIQPGGKNDPVAVFDGAVIPVGVNNTPTLLYTSVSFLPIHWSIPYTR 132
Query: 214 SVQVQNLAYPADPSDPLLLDWVKYPGNPVLV-PPRHIGPKDFRDP--------------- 257
+ Q+LA + + K PV+ P + FR P
Sbjct: 133 GSETQSLAV----ARDGGRRFDKLDQGPVIADHPFAVDVTAFRAPFVFRSARLDVLLSLD 188
Query: 258 -------------TTAWAGPDGKWRLTIGSKIGKTGISLV------YQTTDFKTYELLDE 298
W + W + + + G + ++F+ +E L E
Sbjct: 189 EEVARNETAVQQAVDGWTEKNAPWYVAVSGGVHGVGPAQFLYRQNGGNASEFQYWEYLGE 248
Query: 299 YLHAVPGTG-------------MWECVDFYPVAINGSVGLDTS---ATGPGIKHVLKASL 342
+ + +E + + G G +
Sbjct: 249 WWQEATNSSWGDEGTWAGRWGFNFETGNVLFLTEEGHDPQTGEVFVTLGTEGSGLPIVPQ 308
Query: 343 DDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPY--------- 392
+ D + E + D+G YA+ P
Sbjct: 309 VSSIHDMLWAAGEVGVGSEQEGAKVEFSPSMAGFLDWGFSAYAAAGKVLPASSAVSKTSG 368
Query: 393 --KKRRIVWGWINETDTESDDL----EKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIES 446
R + + W+ E D ++GW +PR + + EE S
Sbjct: 369 VEVDRYVSFVWLTGDQYEQADGFPTAQQGWTGSLLLPRELKVQTVENVVDNELVREEGVS 428
Query: 447 LRQNSTVFEEVVVEPGSVVPLDIGVATQVILHTISLKLLVTL 488
+ + + + A + +++ + TL
Sbjct: 429 WVVGESDNQTATLRTLGITIARETKAALLANGSVTAEEDRTL 470
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} Length = 408 | Back alignment and structure |
|---|
Score = 75.3 bits (184), Expect = 7e-15
Identities = 51/382 (13%), Positives = 98/382 (25%), Gaps = 38/382 (9%)
Query: 45 SAIFLLSLVALIINQTQKPLPSQNNIVPTSKPTSFSNPEPRGVA--EGVSAKSNSHLLRN 102
IF LV+ + + P + + G+ +SA S L
Sbjct: 7 FLIFAAVLVSACNSPKTTKEMKSTDDCPEKVTFTPEQIDHLGITDTNHLSAASKRALKWP 66
Query: 103 IKGSYNWTNAMFTWQRTSFHFQPEKN-WMNDPNGPLFYKGWYHLFYQYNPDSAV------ 155
W Q E+ DP+ + G Y+++Y +
Sbjct: 67 TDLGNEWFIQFGPLQPLKGDLAYEEGVVRRDPSAIIKENGKYYVWYSKSTGPTQGFGGDI 126
Query: 156 -------WGNITWGHAVSADLIHWLYLPIAMV--PDQWYDINGVWTGSATILPDGQIVML 206
W +A S D W A+ YD V+T + + + +
Sbjct: 127 EKDKVFPWDRCDIWYATSEDGWTWKEEGPAVTRGEKGAYDDRSVFTVEI-MKWEDKYYLC 185
Query: 207 YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDG 266
Y +D W K + + + +D D
Sbjct: 186 YQTVKSPYNVRVKNQVGLAWADSPDGPWTKSEEPILSPADNGVWKGEEQDRFAVIKKGDF 245
Query: 267 KWRLTIGSKI----GKT----GISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318
I GK + + F ++ A G + + P++
Sbjct: 246 DSHKVHDPCIIPYKGKFYLYYKGEQMGEAITFGGRQIRHGVAIADNPKGPYVKSPYNPIS 305
Query: 319 INGS----------VGLDTSATGPGIKHVLKAS-LDDTKVDHYAIGTYNPANDKWTPDNP 367
+G + + GP + A + ++ G A +
Sbjct: 306 NSGHEICVWPYNGGIASLITTDGPEKNTIQWAPDGINFEIKSVIPGVNAHAIGLNRTADV 365
Query: 368 EEDVGIGLKWDYGRYYASKSFY 389
E++ L+W Y + +
Sbjct: 366 EKEPTEILRWGLTHIYNNGDYQ 387
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A Length = 404 | Back alignment and structure |
|---|
Score = 63.7 bits (154), Expect = 4e-11
Identities = 38/233 (16%), Positives = 64/233 (27%), Gaps = 35/233 (15%)
Query: 63 PLPSQNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTSFH 122
P S + + A+ + + L +K + W N W +
Sbjct: 16 PRGSHMASNTQTIAVDDTQNYDERKADSLGIPKGNKLSAAMKRAMKWENHDNKW-FFEYK 74
Query: 123 FQPEKNWMN--------DPNGPLFYKGWYHLFYQY-------------NPDSAVWGNITW 161
+P K + DP+ L Y+++Y W
Sbjct: 75 MEPLKGDLAYEEGVVRRDPSAMLKIGDTYYVWYSKSYGPTQGFAGDIEKDKVFPWDRCDI 134
Query: 162 GHAVSADLIHWLYLPIAMV--PDQWYDINGVWTGSATILPDGQIVMLYTG----STDKSV 215
+A S D + W IA+ YD V+T + G+ + Y T +
Sbjct: 135 WYATSKDGLTWKEQGIAVKRGEKGAYDDRSVFTPEV-MEWKGKYYLCYQAVKSPYTVRVK 193
Query: 216 QVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKW 268
+A P W PVL P G + + G +
Sbjct: 194 NTIGMACADSPEGL----W-TKTDKPVL-EPSDTGEWEGDEDNRFKVVSKGDF 240
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* Length = 447 | Back alignment and structure |
|---|
Score = 60.6 bits (146), Expect = 4e-10
Identities = 50/299 (16%), Positives = 80/299 (26%), Gaps = 38/299 (12%)
Query: 132 DPNG-PLFYKGWYHLFYQYNPDSAVWGN---ITWGHAVSADLIHWLYLPIAMVPDQWYDI 187
+ +G Y G++ +F + + + W +D
Sbjct: 66 NADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDA 125
Query: 188 NGV--------WTGSATILPDGQIVMLYTGSTDKSVQVQNLAY----------------P 223
N W+GSAT DG+I + YT + K Q L
Sbjct: 126 NDSILKDQTQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGV 185
Query: 224 ADPSDPLLLDWVKYPGNPVLVPPRHIGPKD---FRDPTTAWAGPDGKWRLTIGSKIGKTG 280
D D Y + + D RDP K+ + + + G
Sbjct: 186 EDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHY-VEDKGHKYLVFEANTGTEDG 244
Query: 281 ISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKA 340
+ Y + + NG++G+ +K V+K
Sbjct: 245 YQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKVMKP 304
Query: 341 SLDDTKV-DHYAIGTYNPANDKW-----TPDNPEEDVGIGLKWDYGRYYASKSFYDPYK 393
+ V D N KW + + GI Y Y S S PYK
Sbjct: 305 LIASNTVTDEIERANVFKMNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYK 363
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* Length = 571 | Back alignment and structure |
|---|
Score = 60.7 bits (146), Expect = 6e-10
Identities = 37/296 (12%), Positives = 66/296 (22%), Gaps = 43/296 (14%)
Query: 138 FYKGWYHLFYQYNPDSAVW--GNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSA 195
+ G+ + + + + D HW + W+GSA
Sbjct: 143 NWNGYQLVIGMMGVPNVNDNHIYLLYNKYGDNDFNHWKNAGPIFGLGT--PVIQQWSGSA 200
Query: 196 TILPDGQIVMLYTGST--DKSVQVQNLA-----YPADPSDPLLLDWVKYPGNPVLVP--- 245
T+ DG I + YT D + Q LA + + + V
Sbjct: 201 TLNKDGSIQLYYTKVDTSDNNTNHQKLASATVYLNLEKDQDKISIAHVDNDHIVFEGDGY 260
Query: 246 -----------PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYE 294
+ RD +G L + G Q + Y
Sbjct: 261 HYQTYDQWKETNKGADNIAMRDAHV-IDDDNGNRYLVFEASTGTENYQGDDQIYQWLNYG 319
Query: 295 LLDEYLHAVPGTGMWECVDFYPVAI-NGSVGLDTS---ATGPGIKHVLKASLDDTKV--- 347
++ + N ++G+ P + V + V
Sbjct: 320 GTNKDNLGDFFQILSNSDIKDRAKWSNAAIGIIKLNDDVKNPSVAKVYSPLISAPMVSDE 379
Query: 348 ----------DHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYK 393
+ Y + N D Y S + Y
Sbjct: 380 IERPDVVKLGNKYYLFAATRLNRGSNDDAWMATNKAVGDNVAMIGYVSDNLTHGYV 435
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* Length = 374 | Back alignment and structure |
|---|
Score = 58.7 bits (141), Expect = 2e-09
Identities = 56/366 (15%), Positives = 99/366 (27%), Gaps = 87/366 (23%)
Query: 100 LRNIKGSY-NWTNAMFTWQRTSFHFQPEKNWM--------NDPNGPLFYKGWYHLFYQY- 149
LR I+ Y F P K + DP+ L YH++Y
Sbjct: 15 LRAIERGYDEKGPEWLF----EFDITPLKGDLAYEEGVIRRDPSAVLKVDDEYHVWYTKG 70
Query: 150 ------------NPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ--WYDINGVWTGSA 195
W HA S D I W + A+ YD V+T
Sbjct: 71 EGETVGFGSDNPEDKVFPWDKTEVWHATSKDKITWKEIGPAIQRGAAGAYDDRAVFTPEV 130
Query: 196 TILPDGQIVMLYTG----STDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGP 251
+G ++Y ++S++ +AY P P W P+L P + G
Sbjct: 131 LRH-NGTYYLVYQTVKAPYLNRSLEHIAIAYSDSPFGP----W-TKSDAPIL-SPENDGV 183
Query: 252 KDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWEC 311
D + G + ++ D + + G M E
Sbjct: 184 WDTDEDNRFLVKEKGSF--------------DSHKVHDPCLMFFNNRFYLYYKGETMGES 229
Query: 312 VDFYPVAINGSVGLDTSATGPGIKH----VLKASLDDTKVDH------------------ 349
++ I V + S GP K + + + +
Sbjct: 230 MNMGGREIKHGVAIADSPLGPYTKSEYNPITNSGHEVAVWPYKGGMATMLTTDGPEKNTC 289
Query: 350 ------------YAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRI 397
I A + P++ +D G++W Y + ++ +
Sbjct: 290 QWAEDGINFDIMSHIKGAPEAVGFFRPESDSDDPISGIEWGLSHKYDASWNWNYLCFFKT 349
Query: 398 VWGWIN 403
++
Sbjct: 350 RRQVLD 355
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* Length = 356 | Back alignment and structure |
|---|
Score = 53.6 bits (128), Expect = 6e-08
Identities = 37/215 (17%), Positives = 62/215 (28%), Gaps = 27/215 (12%)
Query: 125 PEKNWMNDPNGPLFYKGWYHLFY---QYNPDSAVWGNITWGHAVSADLIHW------LYL 175
E++ +P Y G + Y + G+A S D IH+ +
Sbjct: 45 WEESDTFNP-AATIYDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDGIHFERDTKPAFY 103
Query: 176 PIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWV 235
P + G + DG V+LYT K ++ +A D L W
Sbjct: 104 PAKDNQAENECPGGTEDPRIAMTEDGTYVLLYTQWNRKVPRLA-VATSKD-----LKHWT 157
Query: 236 KYPGNPVLVPPRHIGPKDFRDP---------TTAWAGPDGKWRLTIGSKIG--KTGISLV 284
K+ + + A +GK+ + G K T +L+
Sbjct: 158 KFGPAFEKAYNGKFKDEATKSASLVTTLKGDKQVIAKVNGKYFMYWGEKNVYAATSDNLI 217
Query: 285 YQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAI 319
L + G + + P AI
Sbjct: 218 DWDPLLDENGELLKLFSPRSGYFDSQLTECGPPAI 252
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} Length = 364 | Back alignment and structure |
|---|
Score = 50.1 bits (119), Expect = 7e-07
Identities = 28/153 (18%), Positives = 43/153 (28%), Gaps = 17/153 (11%)
Query: 135 GPLFYKGWYHLFY---QYNPDSAVWGNITWGHAVSADLIHWLYLP-IAMVPDQWYDINGV 190
Y G + Y + G+A S D H+ PD
Sbjct: 57 AATLYNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDGTHFQREKTPVFYPDNDSQKELE 116
Query: 191 WTGSA-----TILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVP 245
W G + DG VM+YT ++ +A + L DW K+ P
Sbjct: 117 WPGGCEDPRIAVTDDGLYVMMYTQWNRHVPRLA-VATSRN-----LKDWTKHG--PAFAK 168
Query: 246 PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK 278
+ + + K + I GK
Sbjct: 169 AFDGKFFNLGCKSGSILTEVVKGKQVIKKVNGK 201
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} Length = 364 | Back alignment and structure |
|---|
Score = 42.0 bits (98), Expect = 3e-04
Identities = 22/158 (13%), Positives = 38/158 (24%), Gaps = 20/158 (12%)
Query: 171 HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTG------STDKSVQVQNLAYPA 224
Y P+ ++ N + +A L +G+IV+LY A
Sbjct: 35 TKFYCPLTK-DSIAWESNDTFNPAA-TLYNGEIVVLYRAEDKSGVGIGHRTSRLGYATST 92
Query: 225 DPSDPLLLDWVKYPGNPVLVP-----PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT 279
D + + PV P P DP DG + +
Sbjct: 93 D-----GTHFQREK-TPVFYPDNDSQKELEWPGGCEDPR-IAVTDDGLYVMMYTQWNRHV 145
Query: 280 GISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPV 317
V + + K + +
Sbjct: 146 PRLAVATSRNLKDWTKHGPAFAKAFDGKFFNLGCKSGS 183
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 Length = 338 | Back alignment and structure |
|---|
Score = 40.8 bits (95), Expect = 7e-04
Identities = 26/175 (14%), Positives = 51/175 (29%), Gaps = 21/175 (12%)
Query: 140 KGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLY--LPIAMVPDQWYDINGVWTGSATI 197
+F + P+ W G+ W Y PI + + V+ + +
Sbjct: 10 HHHMKVFTEKIPNIP-WEERPEGYT----GPVWRYSKNPI-IGRNPVPKGARVFNSAV-V 62
Query: 198 LPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP---RHIGPKDF 254
+G+ V ++ + + D ++W P + P
Sbjct: 63 PYNGEFVGVFRIDHKNTRPFLHFGRSKD-----GINWEIEP-EEIQWVDVNGEPFQPSYA 116
Query: 255 RDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMW 309
DP + + +T + I + T DFKT+ L G+
Sbjct: 117 YDPRVVKI--EDTYYITFCTDDHGPTIGVGM-TKDFKTFVRLPNAYVPFNRNGVL 168
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 494 | |||
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 100.0 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 100.0 | |
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 100.0 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 100.0 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 100.0 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 100.0 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 100.0 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 100.0 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 100.0 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 100.0 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 99.97 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 99.97 | |
| 1w18_A | 493 | Levansucrase; transferase, fructosyl transferase, | 99.93 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 99.93 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 99.92 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 99.92 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 99.91 | |
| 3qz4_A | 311 | Endo-1,4-beta-xylanase D; 5-bladed beta-propeller | 99.89 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 99.87 | |
| 3qee_A | 307 | Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; | 99.86 | |
| 3vss_A | 496 | Beta-fructofuranosidase; glycoside hydrolase famil | 99.85 | |
| 1gyh_A | 318 | Arabinan endo-1,5-alpha-L-arabinosidase A; arabina | 99.83 | |
| 1uv4_A | 293 | Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hy | 99.82 | |
| 3kst_A | 306 | Endo-1,4-beta-xylanase; structural genomics, joint | 99.82 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 99.81 | |
| 3cu9_A | 314 | Intracellular arabinanase; glycosyl hydrolase, hig | 99.78 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 99.73 | |
| 1yrz_A | 528 | Xylan beta-1,4-xylosidase; structural genomics, ny | 99.67 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 99.62 | |
| 3c7f_A | 487 | Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta- | 99.6 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 99.56 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 99.56 | |
| 2exh_A | 535 | Beta-D-xylosidase; glykosidase, hydrolsase, family | 99.55 | |
| 1yif_A | 533 | Beta-1,4-xylosidase; glycosidase, xylan, structura | 99.54 | |
| 3nqh_A | 441 | Glycosyl hydrolase; structural genomics, joint cen | 99.52 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 99.51 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 99.51 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 99.37 | |
| 3c2u_A | 538 | Xylosidase/arabinosidase; tetramer, glycoside hydr | 99.26 | |
| 2x8s_A | 470 | Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; | 99.07 | |
| 3cpn_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 98.9 | |
| 3akh_A | 468 | Putative secreted alpha L-arabinofuranosidase II; | 98.81 | |
| 3zxk_A | 542 | Hiaxhd3; hydrolase, sugar binding protein; HET: XY | 98.74 | |
| 3k1u_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 98.66 | |
| 3qz4_A | 311 | Endo-1,4-beta-xylanase D; 5-bladed beta-propeller | 98.54 | |
| 1uv4_A | 293 | Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hy | 98.42 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 98.28 | |
| 1gyh_A | 318 | Arabinan endo-1,5-alpha-L-arabinosidase A; arabina | 98.27 | |
| 3kst_A | 306 | Endo-1,4-beta-xylanase; structural genomics, joint | 98.21 | |
| 3cu9_A | 314 | Intracellular arabinanase; glycosyl hydrolase, hig | 97.97 | |
| 3qee_A | 307 | Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; | 97.93 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 97.84 | |
| 3c2u_A | 538 | Xylosidase/arabinosidase; tetramer, glycoside hydr | 97.83 | |
| 1yrz_A | 528 | Xylan beta-1,4-xylosidase; structural genomics, ny | 97.8 | |
| 1yif_A | 533 | Beta-1,4-xylosidase; glycosidase, xylan, structura | 97.79 | |
| 3cpn_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 97.7 | |
| 3nqh_A | 441 | Glycosyl hydrolase; structural genomics, joint cen | 97.7 | |
| 1w18_A | 493 | Levansucrase; transferase, fructosyl transferase, | 97.69 | |
| 3c7f_A | 487 | Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta- | 97.65 | |
| 3akh_A | 468 | Putative secreted alpha L-arabinofuranosidase II; | 97.62 | |
| 2exh_A | 535 | Beta-D-xylosidase; glykosidase, hydrolsase, family | 97.61 | |
| 2x8s_A | 470 | Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; | 97.56 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 97.13 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 97.05 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 97.03 | |
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 96.89 | |
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 96.82 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 96.63 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 96.52 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 96.39 | |
| 2ydt_A | 367 | EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; | 96.37 | |
| 3a72_A | 355 | EXO-arabinanase; arabinase, glycosyl hydrolase, hy | 96.27 | |
| 3zxk_A | 542 | Hiaxhd3; hydrolase, sugar binding protein; HET: XY | 96.19 | |
| 3k1u_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 96.14 | |
| 4fj6_A | 523 | Glycoside hydrolase family 33, candidate sialidas; | 95.77 | |
| 3a72_A | 355 | EXO-arabinanase; arabinase, glycosyl hydrolase, hy | 95.69 | |
| 2ydt_A | 367 | EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; | 95.49 | |
| 3vss_A | 496 | Beta-fructofuranosidase; glycoside hydrolase famil | 95.09 | |
| 2xzi_A | 386 | KDNAse, extracellular sialidase/neuraminidase, put | 94.54 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 94.41 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 94.14 | |
| 2bf6_A | 449 | Sialidase, EXO-alpha-sialidase; sialic acid, hydro | 94.05 | |
| 1w8o_A | 601 | Bacterial sialidase; 3D-structure, glycosidase, hy | 93.87 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 93.22 | |
| 2w20_A | 471 | Sialidase A; secreted, cell WALL, hydrolase, glyco | 92.92 | |
| 4fj6_A | 523 | Glycoside hydrolase family 33, candidate sialidas; | 92.26 | |
| 1ms9_A | 648 | Trans-sialidase; trans-glycosylation, protein-acrb | 91.22 | |
| 2sli_A | 679 | Intramolecular trans-sialidase; hydrolase, neurami | 91.08 | |
| 1so7_A | 382 | Sialidase 2; neuraminidase, ganglioside, sugar-ind | 90.79 | |
| 1w8o_A | 601 | Bacterial sialidase; 3D-structure, glycosidase, hy | 89.2 | |
| 2jkb_A | 686 | Sialidase B; intramolecular trans-sialidase, lyase | 89.11 | |
| 2xzi_A | 386 | KDNAse, extracellular sialidase/neuraminidase, put | 83.09 | |
| 1so7_A | 382 | Sialidase 2; neuraminidase, ganglioside, sugar-ind | 82.42 | |
| 3sil_A | 379 | Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1 | 80.42 |
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-108 Score=886.68 Aligned_cols=379 Identities=63% Similarity=1.216 Sum_probs=357.7
Q ss_pred CCCcCCccccccccceeeeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC
Q 011094 105 GSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW 184 (494)
Q Consensus 105 ~~~~~~~~~~~w~Rp~~Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~ 184 (494)
.+|||+|+|++||||+|||+|++||||||||++|++|+|||||||||.++.||+|+||||+|+|||||+++|+||.|+.+
T Consensus 6 ~~~~~~~~~~~~~Rp~yH~~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHa~S~DLvhW~~~p~AL~P~~~ 85 (546)
T 3ugf_A 6 VPYPWSNAQLSWQRTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRDLIHWLYLPLALAADQW 85 (546)
T ss_dssp -CCCCCHHHHHHTSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSCSSSCSCEEEEEEESSSSSCEECCCCBCSCSG
T ss_pred cCcCcchhhhhhcCCeEEEeCCCCCccCCceeEEECCEEEEEEecCCCCCCCCCcEEEEEEcCCcCccccCCCCCCCCcc
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEeeeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecC
Q 011094 185 YDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGP 264 (494)
Q Consensus 185 ~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~ 264 (494)
||.+|||||||++++||+++|||||+..+..|+||+|+|+|++|++|++|+|+++||||.+|++++..+||||+|+|.++
T Consensus 86 ~D~~G~~SGSavv~~dg~~~l~YTg~~~~~~q~q~lA~S~D~~d~~l~~w~K~~~nPVi~~p~g~~~~~fRDPkVvw~~~ 165 (546)
T 3ugf_A 86 YDMQGVFSGSATCLPDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKYPGNPILSAPPGVSPTEFRDASTGWYVS 165 (546)
T ss_dssp GGTTCEEEEEEEECTTSCEEEEEEEECTTCCEEEEEEEESCTTCTTCCCEEECTTCCCBCCCTTSCTTSCCCBCCCEECS
T ss_pred cccCCcCcceEEEeeCCeEEEEEEeccCCCcEEEEEEEECCCCCCccceeEEcCCCceEeCCCCCCcceeeccceEeECC
Confidence 99999999999888899999999999877789999999999999999999999889999988888788999999779878
Q ss_pred CCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCC
Q 011094 265 DGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (494)
Q Consensus 265 dg~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~ 344 (494)
+|+|+|++|++.++.|++++|+|+||++|++.+.+++..++.|||||||||+|++++.++|++|++|+++||||+.|.++
T Consensus 166 ~g~w~MviGa~~~~~G~vllY~S~DL~~W~~~~~~~~~~~~~gmwECPDlf~l~~~~~~gl~~s~~g~~~k~Vl~~s~~~ 245 (546)
T 3ugf_A 166 NGTWRIAIGAKYNTTGIAMVYETKDFKSFKLLEELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDE 245 (546)
T ss_dssp TTCEEEEEEEEETTEEEEEEEEESSSSSCEECSSCSEEETTCCCEEEEEEEEEESSCSSCCCTTCCSTTEEEEEEEEETT
T ss_pred CCEEEEEEEEccCCcceEEEEECCCCCCceEcccccccCCCCCeEECCeEEEECCcCccceeecccCCceeEEEEecccC
Confidence 99999999998778899999999999999999999876556789999999999988878999999999999999999998
Q ss_pred CceeEEEEEEecCCCCcccCCCCCcccccceeeecCCCcccceeecCCCCcEEEEEEccCCCCCCCCcCCCCccCCcccE
Q 011094 345 TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPR 424 (494)
Q Consensus 345 ~~~~~Y~iG~~d~~~~~f~p~~~~~d~g~~~rlD~G~fYA~qtf~d~~~~Rril~GW~~~~d~~~~~~~~gWag~lslPR 424 (494)
.++++|+||+||.++.+|+|++.++|+|+++++|||+|||+|||.|+.++||||||||+++++++++.++||+|+|||||
T Consensus 246 ~~~~~Y~iG~~d~~~~~f~~~~~~~d~g~~~~lD~GdfYA~qtf~d~~~gRril~gWm~~~d~~~~~~~~gW~g~ltlPR 325 (546)
T 3ugf_A 246 QQRDYYAIGTYDLGTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKELDSEVADREKGWANVQTIPR 325 (546)
T ss_dssp TTEEEEEEEEEETTTTEEEESCGGGCTTTSCBSCSSSCEEEEEEEETTTTEEEEEEEECCCSCHHHHHHHTEECEECCCE
T ss_pred CCceEEEEeeecCCCCeeecCCcccccCccccccCCCccCcceeecCCCCCEEEEEeCCCCCcCCCCcccCccCcceeCE
Confidence 88999999999999899999998899999999999999999999998679999999999999887778899999999999
Q ss_pred EEEEeeCCCceEEEcchHHHHhhhhcCeeeeeEEEcCCceEEeecCceeEEEEEEEEEE
Q 011094 425 TVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQVILHTISLK 483 (494)
Q Consensus 425 ~l~l~~~~g~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~~~~~qldi~~~~~~ 483 (494)
||.|++++|.+|+|+||+||++||.+...++++++++|++++|+..++.|+||+++|+-
T Consensus 326 el~l~~~~g~~L~q~Pv~El~~LR~~~~~~~~~~~~~g~~~~l~~~~~~q~di~~~f~~ 384 (546)
T 3ugf_A 326 TVLLDQKTGTNVLLWPVEEVESLRLSSKEFSKVKAGAGSVVPLDVGTATQLDIIAEFEI 384 (546)
T ss_dssp EEEECTTTSSSEEEEECGGGGGGEEEEEEEEEEEECTTEEEECCCSCCSEEEEEEEEEE
T ss_pred EEEEEeCCCCEEEEEehHHHHHHhcCcceecceEecCCCeEEecCCCccEEEEEEEEEe
Confidence 99998666668999999999999999999999999999999999988999999999964
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-94 Score=783.95 Aligned_cols=366 Identities=52% Similarity=0.955 Sum_probs=335.2
Q ss_pred ccceeeeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEE
Q 011094 117 QRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSAT 196 (494)
Q Consensus 117 ~Rp~~Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSav 196 (494)
+||+|||+|++||||||||++|++|+|||||||||.++.||+++||||+|+|||||+++|+||.|+.+||.+|||||||+
T Consensus 8 ~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~G~~SGsav 87 (541)
T 2ac1_A 8 YRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSAT 87 (541)
T ss_dssp TSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSSSSBEEEEEEECCCSGGGTTCEEEEEEE
T ss_pred cccceeecCccCCeeCCCccEEECCEEEEEEeeCCCCCCCCCcEEEEEECCCccceEECceeecCCCccccCCEEcceEE
Confidence 39999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCC--CCCCCCCCCCCeeEeecCCCeEEEEEee
Q 011094 197 ILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (494)
Q Consensus 197 v~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p--~g~~~~~fRDP~V~w~~~dg~w~MviGa 274 (494)
+++||+++|||||......|.||+|+|.|++|++|++|+|+++||||.+| +++...+||||+|+|++++|+|+|++|+
T Consensus 88 ~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga 167 (541)
T 2ac1_A 88 ILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGS 167 (541)
T ss_dssp ECTTSCEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTTCCCTTSEECCCCCEECTTSCEEEEEEE
T ss_pred EeeCCEEEEEEEEeCCCCcEEEEEEEECCCCCCCceeEEecCCCcEEcCCCCCCCCCCceECCeEEeEeCCCeEEEEEEE
Confidence 87799999999996544579999999999999999999999889999887 7777789999997798668999999999
Q ss_pred ecCCeeEEEEEEeCCCCCCEEcCcccccCCCCCceEeccEEEecccCccccccccCCCC---eEEEEEeeeCCCceeEEE
Q 011094 275 KIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPG---IKHVLKASLDDTKVDHYA 351 (494)
Q Consensus 275 ~~~~~G~v~lY~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~---~k~vl~~s~~~~~~~~Y~ 351 (494)
+.+..|++++|+|+||++|++.+.+++.....+||||||||+|+.++.++|++|++|.. +||||+.|.++...++|+
T Consensus 168 ~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~mwECPdlf~l~~~g~~~l~~s~~g~~~~~~~~vl~~s~~~~~~~~Y~ 247 (541)
T 2ac1_A 168 KIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYT 247 (541)
T ss_dssp EETTEEEEEEEEESSSSSCEECSSCSEEEETSCCEEEEEEEEEESSCSCCCCTTCCCBTTBCEEEEEEEEETTTTEEEEE
T ss_pred ecCCceEEEEEECCCCCCcEEcccccccCCCCCcccCCcEEEECCCCcceeEecCCCCCcccceeEEEeeecCCcceEEE
Confidence 87778999999999999999998887654456899999999999878889999999965 799999999888889999
Q ss_pred EEEecCCCCcccCCCCCcccccceeeecCCCcccceeecCCCCcEEEEEEccCCCCCCCCcCCCCccCCcccEEEEEeeC
Q 011094 352 IGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNK 431 (494)
Q Consensus 352 iG~~d~~~~~f~p~~~~~d~g~~~rlD~G~fYA~qtf~d~~~~Rril~GW~~~~d~~~~~~~~gWag~lslPR~l~l~~~ 431 (494)
+|+||.++.+|+|++...|.+++.++|||+|||+|||.|++++||||||||+++++..++.++||+|+|||||+|.|++
T Consensus 248 ~G~~d~~~~~f~~~~~~~~~~~~~~lD~GdfYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPRel~l~~- 326 (541)
T 2ac1_A 248 IGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDR- 326 (541)
T ss_dssp EEEEETTTTEEEECTTCCSSTTSCBSCSSSCEEEEEEEETTTTEEEEEEEECCSSCHHHHHHHTEECEECCCEEEEECT-
T ss_pred EEEEecCCCeEeeCCccccccceeeecCCCcccccEEecCCCCCEEEEEEeCCCCcCCCCCCCCcccccccCEEEEEEc-
Confidence 9999998889999988888888889999999999999998679999999999998776777899999999999999973
Q ss_pred CCceEEEcchHHHHhhhhcCe-eeeeEEEcCCceEEeecCceeEEEEEEEEEE
Q 011094 432 TGSNVVQWPVEEIESLRQNST-VFEEVVVEPGSVVPLDIGVATQVILHTISLK 483 (494)
Q Consensus 432 ~g~~L~q~Pv~Ele~LR~~~~-~~~~~~~~~gs~~~l~~~~~~qldi~~~~~~ 483 (494)
+|.+|+|+||+||++||.+.. .+.++.+++++.+++....+.|+||+++|+-
T Consensus 327 ~g~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 379 (541)
T 2ac1_A 327 SGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKV 379 (541)
T ss_dssp TSSSEEEEECGGGGGGBCSSCEEEEEEEECTTEEEECCSSCTTEEEEEEEEEC
T ss_pred CCCEEEEeeHHHHHHhhccccccccceEecCCceeEecCCccceeeeEEEEec
Confidence 676799999999999999887 8888999989888887777889999999853
|
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-94 Score=783.16 Aligned_cols=364 Identities=49% Similarity=0.947 Sum_probs=333.4
Q ss_pred ccceeeeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCC-cEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeE
Q 011094 117 QRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGN-ITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSA 195 (494)
Q Consensus 117 ~Rp~~Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~-~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSa 195 (494)
+||+|||+|++||||||||++|++|+|||||||||.++.||+ ++||||+|+|||||+++|+||.|+.+||.+|||||||
T Consensus 7 ~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlFYQ~~P~~~~~g~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~Gv~SGsa 86 (543)
T 1st8_A 7 YRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNWIHLDPAIYPTQEADSKSCWSGSA 86 (543)
T ss_dssp TSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSCSSCCSCCEEEEEEESSSSSEEECCCSBCCCSGGGTTEEEEEEE
T ss_pred ccccccccCCcCCeECCcccEEECCEEEEEEeeCCCCCCCCCccEEEEEECCCccceEECCeeccCCCccccCCEEcceE
Confidence 499999999999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred EEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeee
Q 011094 196 TILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (494)
Q Consensus 196 vv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~ 275 (494)
++++||+++|||||......|.||+|+|.|++||+|++|+|++.||||.+|+++...+||||+|+|++++|+|+|++|++
T Consensus 87 v~~~dg~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~g~~~~~fRDP~vvw~~~~g~w~mv~ga~ 166 (543)
T 1st8_A 87 TILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLREWVKHPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGD 166 (543)
T ss_dssp EEETTTEEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTCCTTSEECCCCCEECTTSCEEEEEEEE
T ss_pred EEeeCCEEEEEEEEeCCCCcEEEEEEEECCCCCCCcceeEEcCCCcEEeCCCCCCcCccCCCeEEEECCCCcEEEEEEEe
Confidence 88779999999999544457999999999999999999999988999988888777899999977986799999999998
Q ss_pred cCCeeEEEEEEeCCCCCCEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCCceeEEEEEEe
Q 011094 276 IGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTY 355 (494)
Q Consensus 276 ~~~~G~v~lY~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~~~~~Y~iG~~ 355 (494)
.+..|++++|+|+||++|++.+.+++.....+||||||||+|+.++.++|++|++|...||||+.|. ...++|++|+|
T Consensus 167 ~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~mwECPdlf~l~~~g~~~l~~s~~g~~~~~vl~~s~--~~~~~Y~iG~~ 244 (543)
T 1st8_A 167 RDNNGMAFLYQSTDFVNWKRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGF--EGHDWYTIGTY 244 (543)
T ss_dssp ETTEEEEEEEEESSSSSCEECSSCSEEETTCCCCEEEEEEEEETTCSCCCCTTCCSTTEEEEEEEEE--TTEEEEEEEEE
T ss_pred cCCceEEEEEECCCCCCcEECccccccCCCCCceeCCcEEEECCCCccceEecCCCCCceEEEEecc--CCccEEEEEEE
Confidence 7778999999999999999998888654556899999999999878889999999988999999987 56789999999
Q ss_pred cCCCCcccCCCCCc--ccccceeeecCCCcccceeecCCCCcEEEEEEccCCCCCCCCcCCCCccCCcccEEEEEeeCCC
Q 011094 356 NPANDKWTPDNPEE--DVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTG 433 (494)
Q Consensus 356 d~~~~~f~p~~~~~--d~g~~~rlD~G~fYA~qtf~d~~~~Rril~GW~~~~d~~~~~~~~gWag~lslPR~l~l~~~~g 433 (494)
|.++.+|+|+.... |.++++++|||+|||+|||.|++++||||||||+++++..++.++||+|+|||||||.|++ +|
T Consensus 245 d~~~~~f~~~~~~~~~d~~~~~~lD~GdfYA~qtf~~~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPRel~l~~-~g 323 (543)
T 1st8_A 245 SPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQADDIEKGWAGLQSFPRALWIDR-NG 323 (543)
T ss_dssp ETTTTEEEETTCCCCCSSTTSEESBSSSCEEEEEEEETTTTEEEEEEEECCCSCHHHHHHHTEECEECCCEEEEECT-TS
T ss_pred eCCCCeEeeCCccccccccceeeccCCCcccccEeecCCCCCEEEEEecCCCCcCCCCCCCCccceeeeCEEEEEEe-CC
Confidence 99888999987765 7888889999999999999998679999999999998777777899999999999999973 67
Q ss_pred ceEEEcchHHHHhhhhcCeeeeeEEEcCCceEEeecCceeEEEEEEEEEE
Q 011094 434 SNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQVILHTISLK 483 (494)
Q Consensus 434 ~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~~~~~qldi~~~~~~ 483 (494)
.+|+|+||+||++||.+...+.++.+++++.+++....+.|+||+++|+-
T Consensus 324 ~~L~q~Pv~El~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 373 (543)
T 1st8_A 324 KQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHGIAASQADVTISFKL 373 (543)
T ss_dssp SSEEEEECGGGGGGEEEEEEEEEEEECTTEEEECCSSCTTEEEEEEEEEE
T ss_pred CEEEEeEhHHHHHhhcCcccceeEEecCCceEEecccccceeeEEEEEee
Confidence 67999999999999999888899999999888888777899999999864
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-85 Score=702.99 Aligned_cols=337 Identities=24% Similarity=0.500 Sum_probs=285.5
Q ss_pred cccccceeeeecCCCcccCCccceEE--CCEEEEEEeeCCCCCCCCC-cEEEEEEecCccCeeecceeccCCCCcCCCcE
Q 011094 114 FTWQRTSFHFQPEKNWMNDPNGPLFY--KGWYHLFYQYNPDSAVWGN-ITWGHAVSADLIHWLYLPIAMVPDQWYDINGV 190 (494)
Q Consensus 114 ~~w~Rp~~Hf~P~~gwmNDPNG~~y~--~G~YHLFYQ~nP~~~~wg~-~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv 190 (494)
.+.+||+|||+|++||||||||++|+ +|+|||||||||.++.||+ |+||||+|+|||||+++|+||.|+. |.+||
T Consensus 6 ~~~~Rp~~H~~P~~gwmNDPNG~~y~~~~G~YHlFYQ~nP~~~~wg~~~~WGHa~S~DLvhW~~~~~aL~P~~--d~~G~ 83 (509)
T 3kf3_A 6 SEYNRPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDLVHWDEHEIAIGPEH--DNEGI 83 (509)
T ss_dssp HHHHSCSSSCCCSSEEEEEEEEEEEETTTTEEEEEEEEETTCSSCCSSBEEEEEEESSSSSCEECSCCBCCSS--TTCEE
T ss_pred cccccccEeecCCcCCeeCCcceEEeCCCCEEEEEEecCCCCCCCCCcCEEEEEEccCCCCcEECcccccccc--cCCCE
Confidence 34579999999999999999999999 4999999999999999995 9999999999999999999999986 78999
Q ss_pred EeeeEEEcc-------------CCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCC
Q 011094 191 WTGSATILP-------------DGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDP 257 (494)
Q Consensus 191 ~SGSavv~~-------------dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP 257 (494)
|||||+++. +|+++|+|||+.. ..|.||+|+|.|++ .+|+|+++||||.. ...+||||
T Consensus 84 ~SGSav~d~~~t~g~~~~~~~p~~~l~~~YTg~~~-~~q~q~lA~S~D~g----~~~~k~~~nPVi~~----~~~~fRDP 154 (509)
T 3kf3_A 84 FSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIP-DNQTQDIAFSLDGG----YTFTKYENNPVIDV----SSNQFRDP 154 (509)
T ss_dssp EEEEEEECTTCTTSCCCTTSCGGGCEEEEEEEEET-TEEEEEEEEESSSS----SSCEECTTCCSBCC----SCSSCEEE
T ss_pred EeceEEEeCCccccccccccCCCCceEEEECCCCC-CCeeEEEEEECCCC----cceEEcCCCceEcC----CCCcccCC
Confidence 999998853 3689999999764 46999999999964 79999988999964 24799999
Q ss_pred eeEeecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEE
Q 011094 258 TTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHV 337 (494)
Q Consensus 258 ~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~v 337 (494)
+|+|.+++|+|+|++|++ ..|++++|+|+||++|++.+.+.+. ...+||||||||+|+.++. .+.|||
T Consensus 155 kVfw~~~~g~w~Mv~g~~--~~g~i~ly~S~DL~~W~~~~~~~~~-~~G~mwECPdlf~l~~~~~---------~~~k~v 222 (509)
T 3kf3_A 155 KVFWHEDSNQWIMVVSKS--QEYKIQIFGSANLKNWVLNSNFSSG-YYGNQYECPGLIEVPIENS---------DKSKWV 222 (509)
T ss_dssp EEEEETTTTEEEEEEEEG--GGTEEEEEEESSSSSCEEEEEECCB-CCCSCEEEEEEEEEEBTTS---------SCEEEE
T ss_pred eEEEECCCCEEEEEEEEC--CCCEEEEEECCCCCCceEccccccC-CccceeECCeEEEECccCC---------CCceEE
Confidence 998887789999999864 3578999999999999999998762 2224999999999986432 357999
Q ss_pred EEeeeCC-----CceeEEEEEEecCCCCcccCCCCCcccccceeeecC-CCcccceeecCCCCcEEEEEEccCCCCCCCC
Q 011094 338 LKASLDD-----TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDD 411 (494)
Q Consensus 338 l~~s~~~-----~~~~~Y~iG~~d~~~~~f~p~~~~~d~g~~~rlD~G-~fYA~qtf~d~~~~Rril~GW~~~~d~~~~~ 411 (494)
|++|+++ ...++|+||+||+. +|+|+..+ ..++||| +|||+|||.++ ++||||||||+++++....
T Consensus 223 L~~s~~~~~p~g~~~~~Y~vG~~d~~--~f~~~~~~-----~~~lD~G~DfYA~qtf~~~-~grri~igWm~~~~~~~~~ 294 (509)
T 3kf3_A 223 MFLAINPGSPLGGSINQYFVGDFDGF--QFVPDDSQ-----TRFVDIGKDFYAFQTFSEV-EHGVLGLAWASNWQYADQV 294 (509)
T ss_dssp EEEEECSCCTTSSCEEEEEEEEECSS--CEEESSCB-----CEESCCSSSCEEEEECBSC-SSSEEEEEECSCTTTTTTS
T ss_pred EEEccCCCCCCCCCceEEEEEEEeCC--EEEecCcc-----ceeeccCCcceeeceeeCC-CCCEEEEEecCCcccccCC
Confidence 9998764 24678999999975 89887642 3579999 79999999654 7999999999999987766
Q ss_pred cCCCCccCCcccEEEEEee------CCCceEEEcchH-HHHhhhhcCeeeeeEEEcCCceEEeecCc-eeEEEEEEEEE
Q 011094 412 LEKGWASVQTIPRTVLYDN------KTGSNVVQWPVE-EIESLRQNSTVFEEVVVEPGSVVPLDIGV-ATQVILHTISL 482 (494)
Q Consensus 412 ~~~gWag~lslPR~l~l~~------~~g~~L~q~Pv~-Ele~LR~~~~~~~~~~~~~gs~~~l~~~~-~~qldi~~~~~ 482 (494)
.++||+|+|||||||.|++ +++.+|+|+||+ ||++||.. ..++++++++++.+.+.+.. ..++||+++|.
T Consensus 295 p~~~W~g~~tlPRel~l~~~~~~~~~~~~~L~q~Pv~~el~~lr~~-~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~ 372 (509)
T 3kf3_A 295 PTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNPVLPDSINVVDK-LKKKNVKLTNKKPIKTNFKGSTGLFDFNITFK 372 (509)
T ss_dssp SCCSEECCBCCCEEEEEEEEESSSSCEEEEEEEEECCCTTSEEEEE-EEEEEEECCTTSCEECCCSCCCSEEEEEEEEE
T ss_pred CCCCcccccccCEEEEEEecccCCCCCccEEEEEEcHHHHHHhhCc-ceecceEecCCceeEEecCCCCceEEEEEEEe
Confidence 7799999999999999986 223489999999 99999954 44888999988876666543 23788888764
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-85 Score=707.56 Aligned_cols=336 Identities=31% Similarity=0.582 Sum_probs=285.6
Q ss_pred ccceeeeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEE
Q 011094 117 QRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSAT 196 (494)
Q Consensus 117 ~Rp~~Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSav 196 (494)
+||+|||+|++||||||||++|++|+|||||||||.++.||+++||||+|+|||||+++|+||.|+.++|.+|||||||+
T Consensus 39 ~Rp~~H~~p~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~wg~~~WgHa~S~DLvhW~~~~~aL~P~~~~d~~g~~SGSav 118 (526)
T 3pij_A 39 WYPKYHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWGPMHWGHVSSTDMLNWKREPIMFAPSLEQEKDGVFSGSAV 118 (526)
T ss_dssp SCCSSSCBCSSEEEEEEEEEEEETTEEEEEEEEETTCSSSCSBEEEEEEESSSSSEEECCCCBCCCBGGGTTEEEEEEEE
T ss_pred ccccEeEeCCcCCeeCCeEEEEECCEEEEEEEcCCCCCCcCCcEEEEEEeCCCCCceeCeeccCCCCccccCCeEeceEE
Confidence 49999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCeEEEEEeccCC------C--ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeE
Q 011094 197 ILPDGQIVMLYTGSTD------K--SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKW 268 (494)
Q Consensus 197 v~~dG~~~~~YTG~~~------~--~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w 268 (494)
++.||+++|+|||+.. . ..|.||+|+|+|++ |++|+|++ |||..|++....+||||+| |. .+|+|
T Consensus 119 ~~~dg~~~l~YTg~~~~~~~~~~~~~~q~q~lA~S~D~g---l~~w~K~~--pvi~~P~~~~~~~fRDP~V-~~-~~g~w 191 (526)
T 3pij_A 119 IDDNGDLRFYYTGHRWANGHDNTGGDWQVQMTALPDNDE---LTSATKQG--MIIDCPTDKVDHHYRDPKV-WK-TGDTW 191 (526)
T ss_dssp ECTTSCEEEEEEEEEETTSSSGGGCEEEEEEEEEESSTT---CSCEEEEE--EEECCCGGGEEEEEEEEEE-EE-ETTEE
T ss_pred EccCCEEEEEEecccCcccccCCCCceeEEEEEEECCCC---cceEEECC--ccccCCCCccccccccCEE-EE-ECCEE
Confidence 8788999999999842 1 24899999999864 58999984 8887665445679999999 65 68999
Q ss_pred EEEEeee-cCCeeEEEEEEeCCCCCCEEcCccc-ccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeee---C
Q 011094 269 RLTIGSK-IGKTGISLVYQTTDFKTYELLDEYL-HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASL---D 343 (494)
Q Consensus 269 ~MviGa~-~~~~G~v~lY~S~Dl~~W~~~~~ll-~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~---~ 343 (494)
+|++|++ .+..|++++|+|+||++|++.+.++ ......+||||||||+|++.. | ..||||.+|. +
T Consensus 192 ~mv~ga~~~~~~G~i~ly~S~Dl~~W~~~g~l~~~~~~~g~mwECPdlf~l~~~~---------g-~~k~vL~~s~~g~~ 261 (526)
T 3pij_A 192 YMTFGVSSADKRGQMWLFSSKDMVRWEYERVLFQHPDPDVFMLECPDFSPIKDKD---------G-NEKWVIGFSAMGSK 261 (526)
T ss_dssp EEEEEEEETTSCEEEEEEEESSSSSCEEEEEEEECSCTTCCEEEEEEEEEEECTT---------S-CEEEEEEEEEESCC
T ss_pred EEEEEEecCCCCcEEEEEECCCCCcceEcCcccccCCCccCeEECCEEEEECCCC---------C-ceeEEEEEeccccC
Confidence 9999976 4678999999999999999999954 333345699999999998421 1 4689997663 2
Q ss_pred C-------CceeEEEEEEecCCCCcccCCCCCcccccceeeecC-CCcccceeecCCCCcEEEEEEccCCCCCCCCcCCC
Q 011094 344 D-------TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKG 415 (494)
Q Consensus 344 ~-------~~~~~Y~iG~~d~~~~~f~p~~~~~d~g~~~rlD~G-~fYA~qtf~d~~~~Rril~GW~~~~d~~~~~~~~g 415 (494)
. ...++|++|+||. +.+|+|+.. ..++||| +|||+|||. + ++||||||||+++++..++.++|
T Consensus 262 ~~~~~~~~~~~~~Y~vG~~d~-~~~f~~~~~------~~~lD~G~dfYA~qtf~-~-~gRri~~gW~~~~~~~~~~~~~g 332 (526)
T 3pij_A 262 PSGFMNRNVSNAGYMIGTWEP-GGEFKPETE------FRLWDCGHNYYAPQSFN-V-DGRQIVYGWMSPFVQPIPMEDDG 332 (526)
T ss_dssp CBTTBSCSSSEEEEEEEEECT-TSCEEESSC------CEESCCSSSCEEEEEEE-E-TTEEEEEEEECCCSSCCGGGGGT
T ss_pred CCccccccccceeEEEEEEcC-CCcEEECCc------ceeeeeCCCccccceeC-C-CCCEEEEEecCCCcccCCCCCCC
Confidence 2 2357899999994 358988653 3579999 799999998 4 79999999999999888888899
Q ss_pred CccCCcccEEEEEeeCCCceEEEcchHHHHhhhhcCeeeeeEEEcCCceEEeecCceeEEEEEEEE
Q 011094 416 WASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQVILHTIS 481 (494)
Q Consensus 416 Wag~lslPR~l~l~~~~g~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~~~~~qldi~~~~ 481 (494)
|+|+|||||+|.|++ +| +|+|+||+||++||.+...+.++++..++...+.. .+.+++|+++|
T Consensus 333 W~g~ltlPRel~l~~-~g-~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~-~~~~~el~~~~ 395 (526)
T 3pij_A 333 WCGQLTLPREITLGD-DG-DVVTAPVAEMEGLREDTLDHGSVTLDMDGEQIIAD-DAEAVEIEMTI 395 (526)
T ss_dssp EECEECCCEEEEECT-TS-SEEEEECGGGGGGBSCCEEEEEEEECSSEEEEEES-CCSSEEEEEEE
T ss_pred ccceEEeCEEEEEEe-CC-cEEEeecHHHHHhhhCcccccceEeccCCceEecC-CCcEEEEEEEE
Confidence 999999999999975 45 69999999999999999889888887765444443 35667777754
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} PDB: 3rwk_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-84 Score=700.52 Aligned_cols=339 Identities=27% Similarity=0.524 Sum_probs=279.4
Q ss_pred ccceeeeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcE--Eeee
Q 011094 117 QRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGV--WTGS 194 (494)
Q Consensus 117 ~Rp~~Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv--~SGS 194 (494)
+||+|||+|++||||||||++|++|+|||||||||.++.||+|+||||+|+|||||+++|+|| | |.+|| ||||
T Consensus 28 ~Rp~yH~~P~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~wg~~~WgHa~S~DLvhW~~~~~aL-~----d~~g~~~~SGS 102 (516)
T 3sc7_X 28 YRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWGNICWGHATSTDLMHWAHKPTAI-A----DENGVEAFTGT 102 (516)
T ss_dssp TCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTCSTTCCCEEEEEEESSSSSCEEEEEEE-C----CBTTEEEEEEE
T ss_pred ccccEeecCCcCCcCCCeeeEEECCEEEEEEeCCCCCCccCCCEEEEEEeCCCCcceecCccc-c----CCCCceeEece
Confidence 499999999999999999999999999999999999999999999999999999999999999 4 45666 9999
Q ss_pred EEEccCC----------eEEEEEeccCC-CccceEEEEEEcCCCCCCcceEEEcCCCceecCCC----CC-CCCCCCCCe
Q 011094 195 ATILPDG----------QIVMLYTGSTD-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR----HI-GPKDFRDPT 258 (494)
Q Consensus 195 avv~~dG----------~~~~~YTG~~~-~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~----g~-~~~~fRDP~ 258 (494)
|++++++ .++|||||+.. ...|.||+|+|.|.+ ++|+|+++||||.+++ ++ +..+||||+
T Consensus 103 av~~~~~~~g~~~~~~~~l~l~YTg~~~~~~~q~q~lA~s~D~g----~~w~k~~~nPVi~~~~~~~~~~~~~~~fRDPk 178 (516)
T 3sc7_X 103 AYYDPNNTSGLGDSANPPYLAWFTGYTTSSQTQDQRLAFSVDNG----ATWTKFQGNPIISTSQEAPHDITGGLESRDPK 178 (516)
T ss_dssp EEECTTCTTSSSCSSSCCEEEEEEEEETTTTEEEEEEEEESSTT----SCCEECTTCCSBCHHHHTTTCTTSSSSCEEEE
T ss_pred EEEeCCcccccccCCCCeEEEEEeeeeCCCCceEEEEEEecCCC----ceEEEcCCCceEcCCCcccccccCCCcccCCe
Confidence 9987653 59999999864 357999999999864 8999999999998543 22 224899999
Q ss_pred eEeecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcCcccccCC-C----CCceEeccEEEecccCccccccccCCCC
Q 011094 259 TAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVP-G----TGMWECVDFYPVAINGSVGLDTSATGPG 333 (494)
Q Consensus 259 V~w~~~dg~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~~~~-~----~gmwECPdlf~l~~~~~~~l~~s~~G~~ 333 (494)
|+|.+++|+|+|++|++ ..|.+++|+|+||++|++.+++..... + .+||||||||+|+.++. .+
T Consensus 179 V~~~~~~g~w~mv~g~~--~~~~i~ly~S~DL~~W~~~~~l~~~~~~g~~~~~~mwECPdlf~l~~~g~---------~~ 247 (516)
T 3sc7_X 179 VFFHRQSGNWIMVLAHG--GQDKLSFWTSADTINWTWQSDLKSTSINGLSSDITGWEVPDMFELPVEGT---------EE 247 (516)
T ss_dssp EEEETTTTEEEEEEECB--TTCEEEEEEESSSSSCEEEEEEEGGGSTTCCTTCCCBCCCEEEEEECSSS---------SC
T ss_pred EEEECCCCeEEEEEEEC--CCCEEEEEECCCCCCceEcccccccCCCCcccccceEECCcEEEecccCC---------CC
Confidence 98876789999999864 347899999999999999999875321 1 24999999999985432 24
Q ss_pred eEEEEEeeeCCC-----ceeEEEEEEecCCCCcccCCCCCcccccceeeecC-CCcccceeec--CCCCcEEEEEEccCC
Q 011094 334 IKHVLKASLDDT-----KVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYD--PYKKRRIVWGWINET 405 (494)
Q Consensus 334 ~k~vl~~s~~~~-----~~~~Y~iG~~d~~~~~f~p~~~~~d~g~~~rlD~G-~fYA~qtf~d--~~~~Rril~GW~~~~ 405 (494)
.||||.+|.+.. ...+|++|+||+. +|+++.... ..+++||| +|||+|||++ ..++|||+||||+++
T Consensus 248 ~k~VL~~s~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~~---~~~~lD~G~DfYA~qtf~~~~~~~gRri~w~w~~~~ 322 (516)
T 3sc7_X 248 TTWVVMMTPAEGSPAGGNGVLAITGSFDGK--SFTADPVDA---STMWLDNGRDFDGALSWVNVPASDGRRIIAAVMNSY 322 (516)
T ss_dssp EEEEEEECCSSCCTTSSSCCEEEEEEECSS--CEEECCCCT---TTSBSCSSSSCEEEEECBSCCTTTCCCEEEEEECCS
T ss_pred ceEEEEECCCCCCCCCCCceEEEEEEccCC--eeEeCCCCc---cceeEEcCCCccccccccCCcCCCCCEEEEEECCCc
Confidence 699999997542 3678999999986 677653211 13579999 7999999974 247999999999887
Q ss_pred CCCCCCcCCCCccCCcccEEEEEeeCCC-ceEEEcchHHHHhhhhcCeeeeeEEEcCCceEEeecCceeEEEEEEEEEE
Q 011094 406 DTESDDLEKGWASVQTIPRTVLYDNKTG-SNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQVILHTISLK 483 (494)
Q Consensus 406 d~~~~~~~~gWag~lslPR~l~l~~~~g-~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~~~~~qldi~~~~~~ 483 (494)
+... .++||+|+|||||||.|++++| .+|+|+||+||++||.+...+.+.++.+++.+ +....+.|+||+++|..
T Consensus 323 ~~~~--pt~gW~g~ltlPRel~l~~~~~~~~L~q~Pv~El~~Lr~~~~~~~~~~~~~~~~~-l~~~~~~~~el~~~~~~ 398 (516)
T 3sc7_X 323 GSNP--PTTTWKGMLSFPRTLSLKKVGTQQHFVQQPITELDTISTSLQILANQTITPGQTL-LSSIRGTALDVRVAFYP 398 (516)
T ss_dssp TTCS--SCSSEECEECCCEEEEEEEETTEEEEEEEECGGGGGGEEEEEEEEEEEECTTCCB-STTCCCSSEEEEEEEEE
T ss_pred cCCC--CCCCcccccccCEEEEEEecCCceEEEeCCHHHHHhhhccceeecceEecCCceE-ccCCCceEEEEEEEEEc
Confidence 6543 3579999999999999986444 47999999999999998888888889888754 33334678999998853
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-84 Score=697.60 Aligned_cols=345 Identities=28% Similarity=0.545 Sum_probs=288.9
Q ss_pred ccceeeeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceec----cCCCCcCCCcEEe
Q 011094 117 QRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM----VPDQWYDINGVWT 192 (494)
Q Consensus 117 ~Rp~~Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL----~Pd~~~D~~Gv~S 192 (494)
+||+|||+|++||||||||++|++|+|||||||||.++.||+|+||||+|+|||||+++|+|| .|+ +|..||||
T Consensus 7 ~Rp~~H~~P~~gw~NDPnG~~~~~G~yHlfyQ~~P~~~~wg~~~WgHa~S~Dlv~W~~~~~al~~~g~P~--~d~~g~~S 84 (518)
T 1y4w_A 7 YRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEKPVALLARGFGS--DVTEMYFS 84 (518)
T ss_dssp TCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSSSSCEEEEEEECCBTTTS--CCCBEEEE
T ss_pred ccccEeeeCCcCceECCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCccEEECCceEecCCCCC--CCCCceEe
Confidence 499999999999999999999999999999999999999999999999999999999999999 776 57899999
Q ss_pred eeEEEccCC----------eEEEEEeccCCC------------ccceEEEEEEcCCCCCCcceEEEc-CCCceecCCCC-
Q 011094 193 GSATILPDG----------QIVMLYTGSTDK------------SVQVQNLAYPADPSDPLLLDWVKY-PGNPVLVPPRH- 248 (494)
Q Consensus 193 GSavv~~dG----------~~~~~YTG~~~~------------~~q~q~lA~S~D~~d~lL~~W~K~-~~nPVi~~p~g- 248 (494)
|||+++.+| +++|||||+... ..|+||+|+|.|.+ ++|+|+ ++||||.+++.
T Consensus 85 Gsav~~~~~~~g~~~~~~~~~~l~YTg~~~~~~~~~~~~~~~~~~q~q~lA~s~D~g----~~w~k~~~~~pvi~~~~~~ 160 (518)
T 1y4w_A 85 GSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDG----LTWTTYDAANPVIPNPPSP 160 (518)
T ss_dssp EEEEECTTCTTSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTT----SSCEECTTTCCSBCSCCTT
T ss_pred eeEEEcCCCccccccCCCccEEEEEeeeeccccccccccccccceeEEEEEEEcCCC----ceEEEcCCCCCeEecCCcc
Confidence 999987665 899999998642 25899999999853 899999 78999987553
Q ss_pred --CCCCCCCCCeeEeecCCCeEEEE--EeeecCCeeEEEEEEeCCCCCCEEcCcccccCCCCCceEeccEEEecccCccc
Q 011094 249 --IGPKDFRDPTTAWAGPDGKWRLT--IGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVG 324 (494)
Q Consensus 249 --~~~~~fRDP~V~w~~~dg~w~Mv--iGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~ 324 (494)
....+||||+|+|.+++|+|+|+ +|++ ..+++|+|+||++|++.+++.+.....+||||||||+|..++.
T Consensus 161 y~~~~~~fRDP~V~~~~~~g~w~mv~~~g~~----~~i~ly~S~DL~~W~~~~~~~~~~~~~~mwECPdlf~l~~~g~-- 234 (518)
T 1y4w_A 161 YEAEYQNFRDPFVFWHDESQKWVVVTSIAEL----HKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDSG-- 234 (518)
T ss_dssp CGGGTTSEEEEEEEEETTTTEEEEEEEEGGG----TEEEEEEESSSSSCEEEEEECCCSCCSSEEEEEEEEEEEBTTS--
T ss_pred cccCCCCcCCCcEeEECCCCcEEEEEEecCC----CeEEEEECCCCCCCeECccccccCCCCCeEECCeEEEeecCCC--
Confidence 24689999999876668999999 6654 2588999999999999998875444467999999999964332
Q ss_pred cccccCCCCeEEEEEeeeCCC-------ceeEEEEEEecCCCCcccCCCCCccc--ccceeeecC-CCcccceeecCCCC
Q 011094 325 LDTSATGPGIKHVLKASLDDT-------KVDHYAIGTYNPANDKWTPDNPEEDV--GIGLKWDYG-RYYASKSFYDPYKK 394 (494)
Q Consensus 325 l~~s~~G~~~k~vl~~s~~~~-------~~~~Y~iG~~d~~~~~f~p~~~~~d~--g~~~rlD~G-~fYA~qtf~d~~~~ 394 (494)
.+.||||++|.++. ..++|++|+||.. +|+|+...... +...++||| +|||+|||.|.+++
T Consensus 235 -------~~~k~vL~~s~~~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~~~~~~~~~~~lD~G~dfYA~qtf~d~~~g 305 (518)
T 1y4w_A 235 -------NSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGT--TFTPDADTVYPGNSTANWMDWGPDFYAAAGYNGLSLN 305 (518)
T ss_dssp -------SCEEEEEEEEEESCCSTTCCSCEEEEEEEEECSS--CEEECTTTSCSSSSCCEESCSSSSCEEEEECBSCCGG
T ss_pred -------CceeEEEEeccCCCCccccccCCcEEEEEEeeCC--EEEeCCcccccccccceEEccCCCCccccccccCCCC
Confidence 24699999998642 3678999999975 79987633211 224689999 89999999985579
Q ss_pred cEEEEEEccCCCCCCCCcCCCCccCCcccEEEEEeeCCC-ceEEEcchHHHHhhhhcCeeeeeEEEcCCceEEeecCcee
Q 011094 395 RRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTG-SNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVAT 473 (494)
Q Consensus 395 Rril~GW~~~~d~~~~~~~~gWag~lslPR~l~l~~~~g-~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~~~~~ 473 (494)
||||||||++++++.....+||+|+|||||||.|++.+| .+|+|+||+||++||.+...+.+..++.++...+....+.
T Consensus 306 Rri~~gWm~~~~~~~~~pt~gW~g~ltlPRel~l~~~~g~~~L~q~Pv~el~~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (518)
T 1y4w_A 306 DHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQPQEAWSSISNKRPIYSRTFKTLSEGSTNTTTTGE 385 (518)
T ss_dssp GCEEEEECSCTTTGGGCCCSSEECCBCCCEEEEEEEETTEEEEEEEECSCGGGTBCSSCSEEEEEEEECSEECCCEECCS
T ss_pred CEEEEEecCCCccccccCCCCcCcccccCeEEEEEecCCcCeEEEeehHHHHhhhccceeccceeeccccceeecCCCCe
Confidence 999999999998765555689999999999999986444 4899999999999999888788788877765555544567
Q ss_pred EEEEEEEEE
Q 011094 474 QVILHTISL 482 (494)
Q Consensus 474 qldi~~~~~ 482 (494)
++||+++|.
T Consensus 386 ~~el~~~~~ 394 (518)
T 1y4w_A 386 TFKVDLSFS 394 (518)
T ss_dssp SEEEEEEEE
T ss_pred EEEEEEEEe
Confidence 888888886
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-82 Score=678.98 Aligned_cols=327 Identities=22% Similarity=0.420 Sum_probs=271.9
Q ss_pred cceeeeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEE
Q 011094 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATI 197 (494)
Q Consensus 118 Rp~~Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv 197 (494)
.|+|||+|++||||||||++|++|+|||||||||.++.||+ ||||+|+|||||+++|+||.|+. .+|||||||++
T Consensus 1 ~P~~H~~p~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~~g~--WgHa~S~DLvhW~~~~~aL~P~~---~~g~~SGSav~ 75 (492)
T 4ffh_A 1 MAVYHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQNNGPGG--WDHASTTDGVAFTHHGTVMPLRP---DFPVWSGSAVV 75 (492)
T ss_dssp -CCSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSTTCCCE--EEEEEESSSSSCEEEEEEECCBT---TBCCCCEEEEE
T ss_pred CCcEeEcCCCCCeeCCeeeEEECCEEEEEEECCCCCCCCCc--EEEEEeCCCCccEECCCCCCCCC---CCCEEeceEEE
Confidence 38999999999999999999999999999999999999998 99999999999999999999985 68999999998
Q ss_pred ccCCe-------EEEEEeccCC--CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCC------------CCC
Q 011094 198 LPDGQ-------IVMLYTGSTD--KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKD------------FRD 256 (494)
Q Consensus 198 ~~dG~-------~~~~YTG~~~--~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~------------fRD 256 (494)
+++|+ ++|||||+.. ...|.||+|+|+|.+ ++|+|+ +||||.+|.. .+ |||
T Consensus 76 ~~~~~~g~~~~~~~l~YTg~~~~~~~~q~q~lA~S~D~g----~~w~k~-~nPvi~~p~~---~~~~~~~~~~~~~~fRD 147 (492)
T 4ffh_A 76 DTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGG----FTFTAL-PDPVIVNTDG---RAATTPAEIENAEWFRD 147 (492)
T ss_dssp ETTCSSSSCTTEEEEEEEEEGGGCGGGEEEEEEEESSSS----SSCEEC-SSCSBCCTTT---TTCCSHHHHHHHTCEEE
T ss_pred eCCCccccCCCcEEEEEeecccCCCCcEEEEEEEeCCCC----ceEEEc-CccccCCCCc---cccccccccccCCCCcC
Confidence 77764 9999999864 357999999999964 899999 8999986533 35 999
Q ss_pred CeeEeecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEE
Q 011094 257 PTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKH 336 (494)
Q Consensus 257 P~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~ 336 (494)
|+|+|.+++|+|+|++ ++ .+++++|+|+||++|++.+.+.......+||||||||+|++++ .+.||
T Consensus 148 P~V~~~~~~g~w~mv~-a~---~~~i~ly~S~DL~~W~~~~~~~~~~~~g~mwECPdlf~l~~~~----------~~~k~ 213 (492)
T 4ffh_A 148 PKIHWDTARGEWVCVI-GR---LRYAAFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITADD----------GTRHW 213 (492)
T ss_dssp EEEEEETTTTEEEEEE-EE---TTEEEEEEESSSSSCEECCCEECSCGGGCCCEEEEEEEEECTT----------SCEEE
T ss_pred CEEEEECCCCEEEEEE-EC---CCeEEEEECCCCCCceEeccccccCCccceEECCeEEEECCCC----------CCceE
Confidence 9997766789999999 44 3689999999999999999987654445699999999998532 24799
Q ss_pred EEEeeeCC-----CceeEEEEEEecCCCCcccCCCCCcccccceeeecC-CCcccceee--cCCCCcEEEEEEccCCCCC
Q 011094 337 VLKASLDD-----TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFY--DPYKKRRIVWGWINETDTE 408 (494)
Q Consensus 337 vl~~s~~~-----~~~~~Y~iG~~d~~~~~f~p~~~~~d~g~~~rlD~G-~fYA~qtf~--d~~~~Rril~GW~~~~d~~ 408 (494)
||++|.++ ....+|++|+||+ .+|+|+... ..++||| +|||+|||. |.+++||||||||+++++.
T Consensus 214 vL~~s~~~~~~~~~~~~~Y~vG~~d~--~~f~~~~~~-----~~~lD~G~dfYA~qtf~~~~~~~grri~~gW~~~~~~~ 286 (492)
T 4ffh_A 214 VLAASMDAYGIGLPMTYAYWTGTWDG--EQFHADDLT-----PQWLDWGWDWYAAVTWPSIDAPETKRLAIAWMNNWKYA 286 (492)
T ss_dssp EEEEECCCGGGTCCSSEEEEEEEECS--SCEEESCSS-----CEESCCSSCCEEEEEEECSSCTTTCEEEEEECCCTTTC
T ss_pred EEEEccCCCCCCCccceEEEEEEeeC--CEEEeCCCC-----ccceeeCCCcccCCeEccCCCCCCCEEEEEecCCCccc
Confidence 99999765 3467899999995 589987532 3589999 799999999 3457999999999999864
Q ss_pred ---CCCc-CCCCccCCcccEEEEEeeCCCc--eEEEcchHHHHhhhhcCeeeeeEEEcCCceEEeecCceeEEEEEEEE
Q 011094 409 ---SDDL-EKGWASVQTIPRTVLYDNKTGS--NVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQVILHTIS 481 (494)
Q Consensus 409 ---~~~~-~~gWag~lslPR~l~l~~~~g~--~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~~~~~qldi~~~~ 481 (494)
.++. .+||+|+|||||||.|++.+|. +|+|+||+||++||.+...+.+++++.+.. +.. .+..++|++++
T Consensus 287 ~~~~pt~~~~gW~g~~tlPRel~l~~~~~g~~~L~q~Pv~el~~lr~~~~~~~~~~~~~~~~--~~~-~~~~~el~~~~ 362 (492)
T 4ffh_A 287 ARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYVTATTTLPDRTVDGSAV--LPW-NGRAYEIELDI 362 (492)
T ss_dssp SSCCHHHHHHSEECCBCCCEEEEEEECTTSCEEEEEEECGGGGGGEEEEEEECCEEESSEEE--CSC-CCSSEEEEEEE
T ss_pred cccCCcccccCcccccccCEEEEEEEcCCCeeEEEEeehHHHHHhhccceeecceeccCcee--ecC-CCceEEEEEEE
Confidence 3443 4899999999999999865554 899999999999999888888777754332 222 23345555544
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-78 Score=666.16 Aligned_cols=348 Identities=18% Similarity=0.293 Sum_probs=271.3
Q ss_pred CccccccccceeeeecCCCcccCCccceE--ECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeec----ceeccCCC
Q 011094 110 TNAMFTWQRTSFHFQPEKNWMNDPNGPLF--YKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYL----PIAMVPDQ 183 (494)
Q Consensus 110 ~~~~~~w~Rp~~Hf~P~~gwmNDPNG~~y--~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~----p~AL~Pd~ 183 (494)
++.+.+.+||+|||+|+.||||||||++| ++|+|||||||||. | ||||+|+|||||+++ |+||.|+.
T Consensus 19 ~~~~~~~~Rp~~H~~p~~gwmNDPnG~~yD~~~G~YHlFYQ~~P~----g---WgHa~S~DLvhW~~~~~~~~~aL~P~~ 91 (634)
T 3lig_A 19 NNTLFHLWRPRAHILPAEGQIGDPCAHYTDPSTGLFHVGFLHDGD----G---IAGATTANLATYTDTSDNGSFLIQPGG 91 (634)
T ss_dssp TTTTTTTSCCSSSCCCSSEEEEEECCCEECTTTCCEEEEEEETTS----C---EEEEEESSSSCCEESCSTTCEEECSCS
T ss_pred hcccccccCccEeEcCCCCcccCCccceEeCCCCEEEEEEecCCC----c---eeEEEecCcCceeECcCCCCceecCCC
Confidence 34455667999999999999999999999 89999999999994 4 999999999999999 99999999
Q ss_pred CcCCCcEEeeeEEEc-cCCeEEEEEeccCC----------CccceEEEEEEcCCCCCCcceEEEcCCCceecC-CCCCCC
Q 011094 184 WYDINGVWTGSATIL-PDGQIVMLYTGSTD----------KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVP-PRHIGP 251 (494)
Q Consensus 184 ~~D~~Gv~SGSavv~-~dG~~~~~YTG~~~----------~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~-p~g~~~ 251 (494)
+||.+|||||||+++ .+|+++|||||+.. .+.|.||+|+|.|. +++|+|++.||||.. |.++..
T Consensus 92 ~~D~~G~~SGSav~~~~~g~~~~~YTg~~~~~~~~~~~~~~~~q~Q~lA~S~D~----g~~w~K~~~nPVi~~~p~g~~~ 167 (634)
T 3lig_A 92 KNDPVAVFDGAVIPVGVNNTPTLLYTSVSFLPIHWSIPYTRGSETQSLAVARDG----GRRFDKLDQGPVIADHPFAVDV 167 (634)
T ss_dssp SSCSSEEEEEEEESSCGGGSCEEEEEEECSCCCCTTSCCCTTSEEEEEEEEEGG----GTEEEECSSSCSBCSSSTTCCE
T ss_pred CCCCCCcEeeEEEEECCCCEEEEEEEecccccccccCcCCCCcEEEEEEEECCC----CCEEEECCCCceEcCCCcccCC
Confidence 999999999999864 37999999999852 24689999999985 389999998999985 556667
Q ss_pred CCCCCCeeEe----------------------------ecCCCeEEEEEeeec-CCeeEEEEEE--eCC---CCCCEEcC
Q 011094 252 KDFRDPTTAW----------------------------AGPDGKWRLTIGSKI-GKTGISLVYQ--TTD---FKTYELLD 297 (494)
Q Consensus 252 ~~fRDP~V~w----------------------------~~~dg~w~MviGa~~-~~~G~v~lY~--S~D---l~~W~~~~ 297 (494)
.+||||+|+| ...+|+|||++|++. +..|++++|+ |+| |++|+|.+
T Consensus 168 ~~fRDPkV~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ymvlg~~~~~~~g~v~lY~~~s~dd~~l~~W~~~g 247 (634)
T 3lig_A 168 TAFRAPFVFRSARLDVLLSLDEEVARNETAVQQAVDGWTEKNAPWYVAVSGGVHGVGPAQFLYRQNGGNASEFQYWEYLG 247 (634)
T ss_dssp EEEEEEEEECCHHHHHHHHSCTTTTTSHHHHHHHHHTCCGGGCCCEEEEEEEETTTEEEEEEEEEGGGCTTCCSCEEEEE
T ss_pred CccCCCeEccccCccccccccccccccccccccccccccCCCCeEEEEEEEecCCCCCEEEEEEeCCCCccccCCceEec
Confidence 8999999965 125799999999984 5679999999 788 99999999
Q ss_pred cccccC------------CC-CCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCC-----------ceeEEEEE
Q 011094 298 EYLHAV------------PG-TGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT-----------KVDHYAIG 353 (494)
Q Consensus 298 ~ll~~~------------~~-~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~-----------~~~~Y~iG 353 (494)
+++... .. .+||||||||+|++++.. ....+|||.+|..+. ....|++|
T Consensus 248 ~l~~~~~~~~~g~~~~~~~~~G~~wECPdlf~l~~~g~~-------~~~~~~vl~~~~~g~~~~~~~~~~~~~~~~y~~G 320 (634)
T 3lig_A 248 EWWQEATNSSWGDEGTWAGRWGFNFETGNVLFLTEEGHD-------PQTGEVFVTLGTEGSGLPIVPQVSSIHDMLWAAG 320 (634)
T ss_dssp EEEECCTTCCSSSSSCSSCCCCSEEEEEEEEEECSSSBC-------TTTSEEEEEEEEEECCSSCCTTCCCEEEEEEEEE
T ss_pred ccccccccccccccccccCceeeEEECCCEEEECCcccC-------CCCCcEEEEECCCCCCCccccccccccccEEEEE
Confidence 987421 11 249999999999864320 012477777775321 24568999
Q ss_pred Eec--CC----CCcccCCCCCcccccceeeecC-CCcccceeecCC----------C-CcEEEEEEccCCCCC----CCC
Q 011094 354 TYN--PA----NDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPY----------K-KRRIVWGWINETDTE----SDD 411 (494)
Q Consensus 354 ~~d--~~----~~~f~p~~~~~d~g~~~rlD~G-~fYA~qtf~d~~----------~-~Rril~GW~~~~d~~----~~~ 411 (494)
+|+ .. +.+|+++ .++.+||| +|||+|||.++. + +||||||||++++++ .++
T Consensus 321 ~~~~d~~~~~~~~~f~~~-------~~~~lD~G~dfYA~qtf~~~~~~~~~~~~~~~~gRri~igWm~~~~~~~~~~~pt 393 (634)
T 3lig_A 321 EVGVGSEQEGAKVEFSPS-------MAGFLDWGFSAYAAAGKVLPASSAVSKTSGVEVDRYVSFVWLTGDQYEQADGFPT 393 (634)
T ss_dssp EEEECTTSSSCSEEEEEE-------EEEEEECCTTEEEEEEEEECTTSHHHHHHTCCSCEEEEEEEECSSTTTTCSSCCH
T ss_pred EEecCcccccCceeEecC-------CccccccCcCceecceecccccccccccccCCCCCEEEEEeCCCCcccccccCCC
Confidence 994 33 3456553 35689999 799999999974 2 999999999999865 345
Q ss_pred cCCCCccCCcccEEEEEee----------------------CCC----ceEEEcchHHH-HhhhhcCeeee--eEEEcCC
Q 011094 412 LEKGWASVQTIPRTVLYDN----------------------KTG----SNVVQWPVEEI-ESLRQNSTVFE--EVVVEPG 462 (494)
Q Consensus 412 ~~~gWag~lslPR~l~l~~----------------------~~g----~~L~q~Pv~El-e~LR~~~~~~~--~~~~~~g 462 (494)
.+.||+|+|||||||.|++ .+| .+|.|+||+|| ++||.+...++ +.++...
T Consensus 394 ~~~gW~g~ltlPReL~l~~~~~v~~~~l~~~~~~s~~~~~~~~G~~t~~~L~q~Pv~El~~~Lr~~~~~~~~~~~~~~~~ 473 (634)
T 3lig_A 394 AQQGWTGSLLLPRELKVQTVENVVDNELVREEGVSWVVGESDNQTATLRTLGITIARETKAALLANGSVTAEEDRTLQTA 473 (634)
T ss_dssp HHHSEECEECCCEEEEEEEEEEEECSHHHHCSSCSCEEEEECSSEEEEEEEEEEECHHHHHHHHHTCEEEEECCEEECSE
T ss_pred CCCCCccccccCEEEEEEEecCccCccccccccccceeccccCCccccCEEEEeecHHHHHHhhccceeecccceecccc
Confidence 6789999999999999952 122 27999999999 99999875432 2444433
Q ss_pred ceEEeec-CceeEEEEEEEEE
Q 011094 463 SVVPLDI-GVATQVILHTISL 482 (494)
Q Consensus 463 s~~~l~~-~~~~qldi~~~~~ 482 (494)
..+++.. ..+..++|++++.
T Consensus 474 ~~~~~~~~~~~~~~El~~~i~ 494 (634)
T 3lig_A 474 AVVPFAQSPSSKFFVLTAQLE 494 (634)
T ss_dssp EEEECSSCCSSSEEEEEEEEE
T ss_pred ceecccccCCCcEEEEEEEEe
Confidence 3333221 2344555555543
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-77 Score=633.92 Aligned_cols=321 Identities=33% Similarity=0.620 Sum_probs=274.1
Q ss_pred ccceeeeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEE
Q 011094 117 QRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSAT 196 (494)
Q Consensus 117 ~Rp~~Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSav 196 (494)
+||+|||+|++||||||||++|++|+|||||||+|.++.||+++||||+|+||+||+++|+||.|+.+ .+|||||||+
T Consensus 2 ~Rp~~H~~p~~gw~nDPng~~~~~G~yhlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~~~aL~p~~~--~~g~~sgsav 79 (432)
T 1w2t_A 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDDE--THGVFSGSAV 79 (432)
T ss_dssp CSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTSSSCCSCEEEEEEESSSSSCEEEEEEECCSST--TEEEEEEEEE
T ss_pred CCcCCcccCCCCCeECCCcCeEECCEEEEEEecCCCCCCCCCcEEEEEEcCCCcCeEECCccCCCCCC--CCCEEeeEEE
Confidence 49999999999999999999999999999999999999999999999999999999999999999876 6799999998
Q ss_pred EccCCeEEEEEeccCC-----CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEE
Q 011094 197 ILPDGQIVMLYTGSTD-----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLT 271 (494)
Q Consensus 197 v~~dG~~~~~YTG~~~-----~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~Mv 271 (494)
+ .+|+++|||||+.. ...|.|++|+|+|+ .+|+|++.+||+..+++....+||||+| |. .+|+|+|+
T Consensus 80 ~-~~g~~~l~YTg~~~~~~~~~~~~~q~lA~S~D~-----~~w~k~~~~Pvi~~~p~~~~~~fRDP~V-f~-~dg~~~m~ 151 (432)
T 1w2t_A 80 E-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENG-----LDFVKYDGNPVISKPPEEGTHAFRDPKV-NR-SNGEWRMV 151 (432)
T ss_dssp E-ETTEEEEEEEEEECCCSSCCCEEEEEEEEESSS-----SCCEECTTCCSBCSCSSTTEEEEEEEEE-EE-CSSSEEEE
T ss_pred E-ECCEEEEEEecCccCCCCCCceEEEEEEEeCCC-----CeEEecCCCceEeCCCccccccccCCEE-EE-ECCEEEEE
Confidence 6 79999999999864 24689999999985 7999988899998654433678999999 65 48999999
Q ss_pred Eeee-cCCeeEEEEEEeCCCCCCEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCCceeEE
Q 011094 272 IGSK-IGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHY 350 (494)
Q Consensus 272 iGa~-~~~~G~v~lY~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~~~~~Y 350 (494)
+|++ .+..|.+.+|+|+||++|++.+.+... ...+|||||+||+++ .||||.+|..+...+.|
T Consensus 152 ~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~-~~g~~~EcP~lf~~~---------------g~~vL~~s~~g~~~~~Y 215 (432)
T 1w2t_A 152 LGSGKDEKIGRVLLYTSDDLFHWKYEGAIFED-ETTKEIDCPDLVRIG---------------EKDILIYSITSTNSVLF 215 (432)
T ss_dssp EEEEETTTEEEEEEEEESSSSSCEEEEEEEEE-TTCSCCEEEEEEEET---------------TEEEEEEEETTTTEEEE
T ss_pred EEEecCCCCcEEEEEECCCCCCceEccccccC-CCCCEEECCeEEEEC---------------CEEEEEEeCCCCcceEE
Confidence 9987 356789999999999999999988765 235699999999995 28999999887777899
Q ss_pred EEEEecCCCCcccCCCCCcccccceeeecC-CCcccceeecCCCCcEEEEEEccCCCC--CCCCcCCCCccCCcccEEEE
Q 011094 351 AIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDT--ESDDLEKGWASVQTIPRTVL 427 (494)
Q Consensus 351 ~iG~~d~~~~~f~p~~~~~d~g~~~rlD~G-~fYA~qtf~d~~~~Rril~GW~~~~d~--~~~~~~~gWag~lslPR~l~ 427 (494)
++|+|| + ..|.++. ..++|+| +|||+|||.|+ + ||||||||+++++ ..++.++||+|+|||||+|.
T Consensus 216 ~~G~~d-~-~~~~~~~-------~~~lD~G~dfYA~qtf~~~-~-rri~~gW~~~~~~~~~~pt~~~gW~g~~tlPR~l~ 284 (432)
T 1w2t_A 216 SMGELK-E-GKLNVEK-------RGLLDHGTDFYAAQTFFGT-D-RVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELY 284 (432)
T ss_dssp EEEEEE-T-TEEEEEE-------EEESCCSSSCEEEEECBSC-S-SEEEEEESSCTTTGGGCCGGGGTEECCBCCCEEEE
T ss_pred EEEEec-C-CEEcCCc-------cceeccCCCccccceecCC-C-CEEEEEEecCcccccccCcccCCCcCceeccEEEE
Confidence 999999 5 4554422 4689999 89999999997 4 9999999999987 56667899999999999999
Q ss_pred EeeCCCceEEEcchHHHHhhhhcCeeeeeEEEcCCceEEeecCceeEEEEEEEEE
Q 011094 428 YDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQVILHTISL 482 (494)
Q Consensus 428 l~~~~g~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~~~~~qldi~~~~~ 482 (494)
|+ +| +|+|+||+||++||.+...+.+ .+ + ..|....+.++||++++.
T Consensus 285 l~--~g-~L~q~Pv~el~~lr~~~~~~~~-~~--~--~~~~~~~~~~~e~~~~~~ 331 (432)
T 1w2t_A 285 VE--NN-ELKVKPVDELLALRKRKVFETA-KS--G--TFLLDVKENSYEIVCEFS 331 (432)
T ss_dssp EE--TT-EEEEEECGGGGGGEEEEEEEES-SC--E--EEECCCSSSCEEEEEEEE
T ss_pred Ee--CC-EEEEEEcHHHHHhhccceeccc-cc--e--eEecCCCCeEEEEEEEEe
Confidence 96 46 8999999999999997755543 22 1 344444566788887764
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-31 Score=284.02 Aligned_cols=273 Identities=16% Similarity=0.129 Sum_probs=182.2
Q ss_pred ccCC-ccceE-ECCEEEEEEe-eCCCCCCCCCcEEEEEEec----CccCeeecceeccCCCCcCCCcEEeeeEEEccCCe
Q 011094 130 MNDP-NGPLF-YKGWYHLFYQ-YNPDSAVWGNITWGHAVSA----DLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQ 202 (494)
Q Consensus 130 mNDP-NG~~y-~~G~YHLFYQ-~nP~~~~wg~~~WGHA~S~----DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~ 202 (494)
++|| +|-++ ++|++|+||+ ..|+ ++..||.|..++ ||+||+++|.++.|+.++ .|||||||++..||+
T Consensus 133 l~D~~~G~v~~~~G~~vvf~L~~dP~---~~d~Hi~~~ys~~g~~DLvhW~~~G~~~~~~~~~--~g~WSGSAi~~~DG~ 207 (571)
T 2yfr_A 133 VQDAKTGYVSNWNGYQLVIGMMGVPN---VNDNHIYLLYNKYGDNDFNHWKNAGPIFGLGTPV--IQQWSGSATLNKDGS 207 (571)
T ss_dssp BBCTTTCCBCCBTTEEEEEEEEECTT---SCCCEEEEEEEETTCCCGGGCEEEEETTCSCCTT--EEEEEEEEEECTTSC
T ss_pred EEecCCCcEEEecCceEEEEEccCCC---CCCcEEEEEECcCCccccCCccCCCeEcCCCCCC--CceECCeeEECcCCE
Confidence 4678 78887 7899999999 5555 578999999998 779999999988886443 799999998757999
Q ss_pred EEEEEeccCCC--ccceEEEEEE---------cCCCCCCcceEEEcCCCceecCCC--------------CCCCCCCCCC
Q 011094 203 IVMLYTGSTDK--SVQVQNLAYP---------ADPSDPLLLDWVKYPGNPVLVPPR--------------HIGPKDFRDP 257 (494)
Q Consensus 203 ~~~~YTG~~~~--~~q~q~lA~S---------~D~~d~lL~~W~K~~~nPVi~~p~--------------g~~~~~fRDP 257 (494)
++|||||+... ..+.|++|.. .|+ .-+..|++. .+|+.+++ +....+||||
T Consensus 208 l~LFYTG~~~~~~~~~~Q~Ia~a~~~l~~~~s~dg--v~~~kw~~~--~~l~~~dg~~Yqt~~q~~~~~~~~~~~~FRDP 283 (571)
T 2yfr_A 208 IQLYYTKVDTSDNNTNHQKLASATVYLNLEKDQDK--ISIAHVDND--HIVFEGDGYHYQTYDQWKETNKGADNIAMRDA 283 (571)
T ss_dssp EEEEEEEEECTTTTCCEEEEEEEEEEEEEEGGGTE--EEEEEEEEE--EEEECCCSSSBCCHHHHHHHCSSCCCCCCEEE
T ss_pred EEEEEeccccCCCCcccceEEEEEeeeeecccCCC--cceecccCC--CceecCCCcccccccccccccccCCcccCcCC
Confidence 99999997632 2345666652 221 113344443 44554432 1146799999
Q ss_pred eeEeecCCCeEEEEEeeecC------------------------------------------CeeEEEEEEeCCC----C
Q 011094 258 TTAWAGPDGKWRLTIGSKIG------------------------------------------KTGISLVYQTTDF----K 291 (494)
Q Consensus 258 ~V~w~~~dg~w~MviGa~~~------------------------------------------~~G~v~lY~S~Dl----~ 291 (494)
+| |.+++|+|||++|++.. ..|+|.+|+|+|+ .
T Consensus 284 ~V-f~d~dG~~YMVfgA~t~~~~~~G~~~ly~w~~yg~~~~f~~~~~~~v~~~~~~~~~a~~~~G~IgL~~s~dl~~n~~ 362 (571)
T 2yfr_A 284 HV-IDDDNGNRYLVFEASTGTENYQGDDQIYQWLNYGGTNKDNLGDFFQILSNSDIKDRAKWSNAAIGIIKLNDDVKNPS 362 (571)
T ss_dssp EE-EECTTCCEEEEEEEEBCTTSCCSGGGGGBGGGTCSCHHHHHHHHHHHHHCHHHHHHHHHCCEEEEEEEECSCTTSCC
T ss_pred eE-EEeCCCCEEEEEEeccCCCCcccchhhccccccccccccchhhhccccccccccccchhccceEEEEEcCCCcCCcc
Confidence 99 66456999999998732 2599999999775 6
Q ss_pred CCEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCC-----------------ceeEE-EEE
Q 011094 292 TYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT-----------------KVDHY-AIG 353 (494)
Q Consensus 292 ~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~-----------------~~~~Y-~iG 353 (494)
+|++.++|..+.....|||||++|++++ ++||.+|.... .+..| ++.
T Consensus 363 ~We~~~pL~~~~~v~dm~EcP~lf~~dG---------------~yyL~~S~q~~~~t~~~~~~~A~g~~g~~~~~y~~vS 427 (571)
T 2yfr_A 363 VAKVYSPLISAPMVSDEIERPDVVKLGN---------------KYYLFAATRLNRGSNDDAWMATNKAVGDNVAMIGYVS 427 (571)
T ss_dssp EEEECCCSEECTTTBSCCEEEEEEEETT---------------EEEEEEEEEGGGBSCHHHHHHHHHHHSCCEEEEEEEE
T ss_pred cceeccccccCCCcCceeecCcEEEECC---------------EEEEEEeCCCCcccccccccccccCcCCceEEEEEEe
Confidence 8999999876543446999999999962 56666654321 12233 444
Q ss_pred EecCCCCcccCCCCCccc-c----cceeeecCCCcccceeecCCCCcEEEEEEccCCCCCCCCcCCCCccCCcccEEEEE
Q 011094 354 TYNPANDKWTPDNPEEDV-G----IGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLY 428 (494)
Q Consensus 354 ~~d~~~~~f~p~~~~~d~-g----~~~rlD~G~fYA~qtf~d~~~~Rril~GW~~~~d~~~~~~~~gWag~lslPR~l~l 428 (494)
|.-.+.|.|-+..--| + ...+++-=.|||.++..+ .+++++++||...... ...+|.|.++-+..|.+
T Consensus 428 --dsl~GPy~plng~glVL~~~~P~~~~~~tyS~Ya~p~~~~--~~~~lv~s~i~~r~~~---~~~~~~GTlap~~~vq~ 500 (571)
T 2yfr_A 428 --DNLTHGYVPLNESGVVLTASVPANWRTATYSYYAVPVEGR--DDQLLITSYITNRGEV---AGKGMHATWAPSFLLQI 500 (571)
T ss_dssp --SSSSSCCEETTTTSEEEECCSCTTSTTCEEEEEEEEETTE--EEEEEEEEEESCSTTT---TCTTCCCEECEEEEEEE
T ss_pred --CCCCCCCeeCCCCceeecCCCCCccccccceeEEEecccC--CCcEEEEEEeCCcCCC---CCcccceeecCcEEEEE
Confidence 3345677652210000 0 001121114677776543 3578999999976543 24679999985555556
Q ss_pred eeCCCce
Q 011094 429 DNKTGSN 435 (494)
Q Consensus 429 ~~~~g~~ 435 (494)
+ .+|++
T Consensus 501 ~-~dgt~ 506 (571)
T 2yfr_A 501 N-PDNTT 506 (571)
T ss_dssp E-TTTEE
T ss_pred c-CCCCE
Confidence 4 35543
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-30 Score=270.53 Aligned_cols=260 Identities=17% Similarity=0.188 Sum_probs=180.3
Q ss_pred CCccce-EECCEEEEEEeeCCCCCCCCCcEEEEEEec----CccCeeecceeccCC-------CCc--CCCcEEeeeEEE
Q 011094 132 DPNGPL-FYKGWYHLFYQYNPDSAVWGNITWGHAVSA----DLIHWLYLPIAMVPD-------QWY--DINGVWTGSATI 197 (494)
Q Consensus 132 DPNG~~-y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~----DLvhW~~~p~AL~Pd-------~~~--D~~Gv~SGSavv 197 (494)
||+|-+ .++|++++||+..+... ++..||+|+.|+ ||+||++.+. +.|+ ..| +..|||||||++
T Consensus 66 d~~G~~~~~~g~~lif~L~~dp~~-~~~~hi~~~ys~~g~~dl~~W~~~G~-vfp~~~~~~~~~~~~~~~~g~WSGSAi~ 143 (447)
T 1oyg_A 66 NADGTVANYHGYHIVFALAGDPKN-ADDTSIYMFYQKVGETSIDSWKNAGR-VFKDSDKFDANDSILKDQTQEWSGSATF 143 (447)
T ss_dssp CTTSSBCCBTTEEEEEEEEECTTC-TTCCEEEEEEEETTCCSGGGCEEEEE-SCCTTHHHHTTCTTGGGCCEEEEEEEEE
T ss_pred CCCCCEEEecCcEEEEEEcCCCCC-CCceEEEEEECcCCCcccCCccCCCe-ecCCCccccccccccCCCCCEECCceEE
Confidence 455544 35788889998765432 478999999999 6699999999 5555 344 368999999987
Q ss_pred ccCCeEEEEEeccCCC--ccceEEEEE-----EcCCCCCCcceEEEcCC-CceecCCCC----------------CCCCC
Q 011094 198 LPDGQIVMLYTGSTDK--SVQVQNLAY-----PADPSDPLLLDWVKYPG-NPVLVPPRH----------------IGPKD 253 (494)
Q Consensus 198 ~~dG~~~~~YTG~~~~--~~q~q~lA~-----S~D~~d~lL~~W~K~~~-nPVi~~p~g----------------~~~~~ 253 (494)
..||+++|||||+..+ ..|+++.|. ++|+ +++++.+. ++|+.+++. -...+
T Consensus 144 ~~dG~i~LfYTg~~~~~~~~q~I~~a~~~l~~~~dg-----v~~~~~~~~~~l~~~Dg~~Yq~~~q~~~~~~~~~~~~~~ 218 (447)
T 1oyg_A 144 TSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSS-----LNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHT 218 (447)
T ss_dssp CTTSCEEEEEEEEEGGGTTEEEEEEEEEEEEECSSC-----EEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCC
T ss_pred CcCCEEEEEEEeecCCCCCceEEEEEecceeecCCC-----cceecccCCCceEcCCCccccccccccccccccCCCccc
Confidence 6799999999998643 234444343 3332 44444332 456654321 12469
Q ss_pred CCCCeeEeecCCCeEEEEEeeecCC------------------------------------------eeEEEEE-EeCCC
Q 011094 254 FRDPTTAWAGPDGKWRLTIGSKIGK------------------------------------------TGISLVY-QTTDF 290 (494)
Q Consensus 254 fRDP~V~w~~~dg~w~MviGa~~~~------------------------------------------~G~v~lY-~S~Dl 290 (494)
||||+| |+ .+|+|||++|++... .|+|.++ .|+|+
T Consensus 219 fRDP~V-f~-d~G~~ymvfgA~t~~~~g~~~~~~l~~w~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~G~Igl~~~s~Dl 296 (447)
T 1oyg_A 219 LRDPHY-VE-DKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDY 296 (447)
T ss_dssp CEEEEE-EE-ETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTTS
T ss_pred cCCCeE-Ee-ECCEEEEEEeeecCCCCcccchhhhcchhhcccCcccchhhhhhcccccccccchhcCcEEEEEEcCCCC
Confidence 999999 65 479999999997421 4788777 69999
Q ss_pred CCCEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCC--------ceeEEEEEE-ecCCCCc
Q 011094 291 KTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT--------KVDHYAIGT-YNPANDK 361 (494)
Q Consensus 291 ~~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~--------~~~~Y~iG~-~d~~~~~ 361 (494)
.+|++.++|+.+.....|||||++|++++ |+||.+|.... ....|++|- =|.-.+.
T Consensus 297 ~~W~~~~pL~~~~~v~d~~EcPdlfk~dG---------------kyyLf~S~~~s~~~~~g~~~~~vy~~g~vsdsl~GP 361 (447)
T 1oyg_A 297 TLKKVMKPLIASNTVTDEIERANVFKMNG---------------KWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGP 361 (447)
T ss_dssp SEEEEEEEEEECTTTCSCCEEEEEEEETT---------------EEEEEEEEEGGGCCCTTCCTTCEEEEEEEESSTTCC
T ss_pred CCceEccccccCCCCCCceEcCcEEEECC---------------EEEEEEecCCCcccccCcCCCcEEEEEEEcCCCCCC
Confidence 99999999876544456999999999962 67777765321 124676663 2445667
Q ss_pred ccCCCCCcccccce----------eeecC-CCcccceeecCCCCcEEEEEEccCCCCCCCCcCCCCccCCcccEEEEEe
Q 011094 362 WTPDNPEEDVGIGL----------KWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYD 429 (494)
Q Consensus 362 f~p~~~~~d~g~~~----------rlD~G-~fYA~qtf~d~~~~Rril~GW~~~~d~~~~~~~~gWag~lslPR~l~l~ 429 (494)
|.|-+ |.|+ +++ + .+||.++. + .+++++++||.+.... ..|.|.++-+..|.++
T Consensus 362 y~pln-----gsGlVl~~~~p~~~~~~-~ys~ya~p~~-~--~~~~~v~sf~~~~~~~-----~~~ggtlap~~~v~~~ 426 (447)
T 1oyg_A 362 YKPLN-----KTGLVLKMDLDPNDVTF-TYSHFAVPQA-K--GNNVVITSYMTNRGFY-----ADKQSTFAPSFLLNIK 426 (447)
T ss_dssp CEEGG-----GTSEEEEECCCTTCTTC-EEEEEEECCS-S--SSEEEEEEEESCTTSC-----SSCCCEECBCEEEEEE
T ss_pred CeeCC-----CCceeecCCCCCccccc-cceeEEEecC-C--CCeEEEEEEeCCCCcc-----cccceeecCcEEEEEc
Confidence 77621 1111 223 3 48888887 5 3589999999976422 4699999977777776
|
| >1w18_A Levansucrase; transferase, fructosyl transferase, glycosyltransferase; 2.5A {Gluconacetobacter diazotrophicus} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=239.02 Aligned_cols=196 Identities=16% Similarity=0.191 Sum_probs=143.0
Q ss_pred ccCCcc-ceEECCEEEEEEeeCCCCC--CCCCc----EEEEEEecC---------ccCeeecceeccCCC--------Cc
Q 011094 130 MNDPNG-PLFYKGWYHLFYQYNPDSA--VWGNI----TWGHAVSAD---------LIHWLYLPIAMVPDQ--------WY 185 (494)
Q Consensus 130 mNDPNG-~~y~~G~YHLFYQ~nP~~~--~wg~~----~WGHA~S~D---------LvhW~~~p~AL~Pd~--------~~ 185 (494)
++||+| ++.++|+||+|||..|... .|+.+ ++||+.|+| |+||++.+.+|.++. .+
T Consensus 78 l~D~dg~~v~~~G~~~vF~L~a~r~~~~~~~drH~~a~I~~~yskdg~~~~~~~~l~~W~~~G~vf~~g~~~~~~~~~~~ 157 (493)
T 1w18_A 78 LIDKHADQFSYNGWEVIFCLTADPNAGYGFDDRHVHARIGFFYRRAGIPASRRPVNGGWTYGGHLFPDGASAQVYAGQTY 157 (493)
T ss_dssp EECTTCCBEEETTEEEEEEEEECTTSSCCGGGCGGGCEEEEEEEESSCCGGGSCTTCCCEEEEESSCTTGGGGGSTTSCC
T ss_pred EECCCCCEEEECCeEEEEEEecCCccCCCccCCCccceeeeEEecCccccccccccCCceECCccccCCCcccccccccc
Confidence 468898 8889999999999998765 35444 455999999 899999999986643 35
Q ss_pred CCCcEEeeeEEEc--cCCeEEEEEeccCC----Cc----cceEEEEEEc-----CCCCCCcceEEEcCCCceecCCCC--
Q 011094 186 DINGVWTGSATIL--PDGQIVMLYTGSTD----KS----VQVQNLAYPA-----DPSDPLLLDWVKYPGNPVLVPPRH-- 248 (494)
Q Consensus 186 D~~Gv~SGSavv~--~dG~~~~~YTG~~~----~~----~q~q~lA~S~-----D~~d~lL~~W~K~~~nPVi~~p~g-- 248 (494)
+..++|||||++. .||+++|||||+.. ++ ...|+||.+. +..+..+.+|+|. .+|+.++..
T Consensus 158 d~~~~WSGSAi~~~~~dG~i~LFYTg~~~~~~~~g~~~~~~~Q~Ia~a~~~l~a~~dgv~~~~w~k~--~~l~~~DG~~Y 235 (493)
T 1w18_A 158 TNQAEWSGSSRLMQIHGNTVSVFYTDVAFNRDANANNITPPQAIITQTLGRIHADFNHVWFTGFTAH--TPLLQPDGVLY 235 (493)
T ss_dssp SEEEEEEEEEEESSTTSCEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEE--EEEECCCSSSB
T ss_pred CcCCeEcCceEEeccCCCEEEEEEEecccccccccccCCcceeEEEEeccceeccCCCccccccccC--CceeecCcccc
Confidence 6679999999876 79999999999852 11 1257776432 2112236788886 566654321
Q ss_pred -----CCCCCCCCCeeEeecC--CCeEEEEEeeec--C---------------------------------CeeEEEEEE
Q 011094 249 -----IGPKDFRDPTTAWAGP--DGKWRLTIGSKI--G---------------------------------KTGISLVYQ 286 (494)
Q Consensus 249 -----~~~~~fRDP~V~w~~~--dg~w~MviGa~~--~---------------------------------~~G~v~lY~ 286 (494)
....+||||+|+ .++ +|+|||+++++. . ..|++.+++
T Consensus 236 qt~~q~~~~~fRDP~vf-~D~~~dG~~YmvFeant~~~~g~~~~~~~~~~y~~~~~~~~~~~~~~~~~a~~~~g~IGLa~ 314 (493)
T 1w18_A 236 QNGAQNEFFNFRDPFTF-EDPKHPGVNYMVFEGNTAGQRGVANCTEADLGFRPNDPNAETLQEVLDSGAYYQKANIGLAI 314 (493)
T ss_dssp CCTTTCTTCCCEEEEEE-ECTTSTTCEEEEEEEEBSSCTTCCCCCHHHHCCCTTCTTCCCHHHHHHTTGGGCCEEEEEEE
T ss_pred ccccccCCccccCCEEE-ecCCCCCCEEEEEEeccCCCCcccccccccccccCCccccchhhhcccccchhccceEEEEE
Confidence 124689999994 444 499999999863 1 246775554
Q ss_pred --eCCCCCCEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeC
Q 011094 287 --TTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (494)
Q Consensus 287 --S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~ 343 (494)
++|+.+|++.++++.+.....|+|||++|++++ ||+|..|..
T Consensus 315 ~~s~Dl~~We~~~PL~~a~~v~deiErP~V~~~~G---------------kyYLFtSs~ 358 (493)
T 1w18_A 315 ATDSTLSKWKFLSPLISANCVNDQTERPQVYLHNG---------------KYYIFTISH 358 (493)
T ss_dssp ESSTTSCCEEEEEEEEECTTTBSCCEEEEEEEETT---------------EEEEEEEEC
T ss_pred eCCCCCccceecCccccCCCCCCcEECCeEEEECC---------------EEEEEEEcc
Confidence 568999999999887655566999999999962 777777643
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7.8e-25 Score=227.49 Aligned_cols=171 Identities=22% Similarity=0.292 Sum_probs=138.7
Q ss_pred cceeeeecCCC--------cccCCccceEECCEEEEEEeeCCCCC-------------CCCCcEEEEEEecCccCeeecc
Q 011094 118 RTSFHFQPEKN--------WMNDPNGPLFYKGWYHLFYQYNPDSA-------------VWGNITWGHAVSADLIHWLYLP 176 (494)
Q Consensus 118 Rp~~Hf~P~~g--------wmNDPNG~~y~~G~YHLFYQ~nP~~~-------------~wg~~~WGHA~S~DLvhW~~~p 176 (494)
+++||++|..| ||||||++++++|+||||||++|... .|+.++|+||+|+||+||++++
T Consensus 30 f~~~~~~P~~g~~~~~e~~~~~DP~~v~~~dG~Yymfyt~~~~~~~G~~~~~~~~~~~~w~~~~i~~a~S~DLv~W~~~g 109 (374)
T 3r4z_A 30 LFEFDITPLKGDLAYEEGVIRRDPSAVLKVDDEYHVWYTKGEGETVGFGSDNPEDKVFPWDKTEVWHATSKDKITWKEIG 109 (374)
T ss_dssp CEEEEEEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSCSCTTSCSSTTTTCEEEEEEESSSSEEEEEE
T ss_pred HHhcccccccCCccccCCcCcCCCCeEEEECCEEEEEEEcCCCcccccccccccccccccCccEEEEEECCCCcCcEeCc
Confidence 88999999999 99999999999999999999986421 3678899999999999999999
Q ss_pred eeccCCC--CcCCCcEEeeeEEEccCCeEEEEEeccCCC----ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCC--
Q 011094 177 IAMVPDQ--WYDINGVWTGSATILPDGQIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRH-- 248 (494)
Q Consensus 177 ~AL~Pd~--~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~----~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g-- 248 (494)
.+|.|+. .||..+||+|+++. .+|+++||||+.... ..+.|++|+|+|+. ..|+|. ++||+.+.+.
T Consensus 110 ~~l~~~~~~~~d~~gvwaPsvi~-~dGkyyL~Yt~~~~~~~~~~~~~igvA~Sdd~~----Gpw~~~-~~Pvi~~~~~~~ 183 (374)
T 3r4z_A 110 PAIQRGAAGAYDDRAVFTPEVLR-HNGTYYLVYQTVKAPYLNRSLEHIAIAYSDSPF----GPWTKS-DAPILSPENDGV 183 (374)
T ss_dssp EEECCCCTTSTTSSEEEEEEEEE-ETTEEEEEEEEECSSCCTTCCBEEEEEEESSTT----CCCEEC-SSCSBCCCCCSE
T ss_pred ccCCCCCCCCccCCCEECCEEEE-ECCEEEEEEEeccCCCCCCCcceEEEEEECCCC----CCeEEC-CCCEeCCCcCCc
Confidence 9999864 78999999999975 699999999997642 24789999998863 689996 7899876432
Q ss_pred ----------------CCCCCCCCCeeEeecCCCeEEEEEeeecC-----Ce---eEEEEEEeCCCC-CCEEc
Q 011094 249 ----------------IGPKDFRDPTTAWAGPDGKWRLTIGSKIG-----KT---GISLVYQTTDFK-TYELL 296 (494)
Q Consensus 249 ----------------~~~~~fRDP~V~w~~~dg~w~MviGa~~~-----~~---G~v~lY~S~Dl~-~W~~~ 296 (494)
++...++||+| ++ .+|+|||++++... .. -.+.+.+|+++. .|+..
T Consensus 184 w~~ddd~~~~~~~~~~~d~~~~~~P~v-~~-~~g~yyl~Y~~~~~~~~~~~~~~~~~igvA~sds~~Gpw~~~ 254 (374)
T 3r4z_A 184 WDTDEDNRFLVKEKGSFDSHKVHDPCL-MF-FNNRFYLYYKGETMGESMNMGGREIKHGVAIADSPLGPYTKS 254 (374)
T ss_dssp ECSSSSCTTCEEECCSTTSSEEEEEEE-EE-ETTEEEEEEEEECTTCCEETTEECEEEEEEEESSTTCCCEEC
T ss_pred eeecCCceEEEecCCccccCccccceE-EE-ECCEEEEEEEecCCCCccccCCCcceEEEEEECCCCCCCEEC
Confidence 12234689999 44 68999999987621 11 157788898854 69885
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-24 Score=226.14 Aligned_cols=186 Identities=20% Similarity=0.244 Sum_probs=141.0
Q ss_pred CcCCcc-cccccccee-eeecCCC--------cccCCccceEECCEEEEEEeeCCC-------------CCCCCCcEEEE
Q 011094 107 YNWTNA-MFTWQRTSF-HFQPEKN--------WMNDPNGPLFYKGWYHLFYQYNPD-------------SAVWGNITWGH 163 (494)
Q Consensus 107 ~~~~~~-~~~w~Rp~~-Hf~P~~g--------wmNDPNG~~y~~G~YHLFYQ~nP~-------------~~~wg~~~WGH 163 (494)
+.|... --+| ||.| |++|..| ++|||||+++++|+||||||++|. ...|+.++|+|
T Consensus 63 ~~~~~~~~~~~-~~~~~~~~p~~g~~~~~~~v~~~DP~~vi~~dG~Yylfyt~~~~~~~G~~~~~~~~~~~p~~~~~i~~ 141 (408)
T 3p2n_A 63 LKWPTDLGNEW-FIQFGPLQPLKGDLAYEEGVVRRDPSAIIKENGKYYVWYSKSTGPTQGFGGDIEKDKVFPWDRCDIWY 141 (408)
T ss_dssp HHSCTTCCSTT-CEEECCCEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSSCTTTSCCSTTTTCEEEE
T ss_pred hcCCcccCCch-hhcccccCCcCCCccccCCcEeCCCCEEEEECCEEEEEEEeCCCcccccccccccccccccccceEEE
Confidence 456532 3345 9999 9999999 999999999999999999998762 12356789999
Q ss_pred EEecCccCeeecceeccCCC--CcCCCcEEeeeEEEccCCeEEEEEeccCCC----ccceEEEEEEcCCCCCCcceEEEc
Q 011094 164 AVSADLIHWLYLPIAMVPDQ--WYDINGVWTGSATILPDGQIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKY 237 (494)
Q Consensus 164 A~S~DLvhW~~~p~AL~Pd~--~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~----~~q~q~lA~S~D~~d~lL~~W~K~ 237 (494)
|+|+||+||++.+.+|.|+. .||..+||+++++. .+|+++||||++... ..+.+++|++... .+. |++.
T Consensus 142 A~S~Dlv~W~~~g~~l~~~~~~~wd~~gv~aPsVi~-~dGkYyL~Yt~~~~~~~~~~~~~i~va~A~S~---DG~-W~~~ 216 (408)
T 3p2n_A 142 ATSEDGWTWKEEGPAVTRGEKGAYDDRSVFTVEIMK-WEDKYYLCYQTVKSPYNVRVKNQVGLAWADSP---DGP-WTKS 216 (408)
T ss_dssp EEESSSSEEEEEEEEECCCSTTSTTSSEEEEEEEEE-ETTEEEEEEEEECSSCCTTCCCEEEEEEESST---TCC-CEEC
T ss_pred EEcCCCCeeeEeCceeCCCCCCCcccCceEeeEEEE-ECCEEEEEEEeecCCCCCcCCCceEEEEEECC---CCC-EEEC
Confidence 99999999999999998865 78899999999975 799999999996421 1245666665442 135 9997
Q ss_pred CCCceecCC------------------CCCCCCCCCCCeeEeecCCCeEEEEEeeecC------C--eeEEEEEEeCCCC
Q 011094 238 PGNPVLVPP------------------RHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG------K--TGISLVYQTTDFK 291 (494)
Q Consensus 238 ~~nPVi~~p------------------~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~------~--~G~v~lY~S~Dl~ 291 (494)
++||+.+. ..++...+++|.|+ + .+|+|||++.+... . .-.+.+.+|+|+.
T Consensus 217 -~~pli~~~~~~~~~~e~d~~~~~~~~~~wd~~~v~~P~v~-~-~~G~yyl~Ys~~~~g~~~~~~~~~~~igvA~Sdd~~ 293 (408)
T 3p2n_A 217 -EEPILSPADNGVWKGEEQDRFAVIKKGDFDSHKVHDPCII-P-YKGKFYLYYKGEQMGEAITFGGRQIRHGVAIADNPK 293 (408)
T ss_dssp -SSCSBCCCSCCEECSSSCCTTCEEECCSTTSSEEEEEEEE-E-ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTT
T ss_pred -CcceeCCCCCceEEEecCCcccccccceecCCCeEcceEE-E-ECCEEEEEEEcccCccccccCCCccEEEEEEECCCC
Confidence 57887653 23334457899995 3 58999999987631 1 1356788999987
Q ss_pred -CCEEcC--cccc
Q 011094 292 -TYELLD--EYLH 301 (494)
Q Consensus 292 -~W~~~~--~ll~ 301 (494)
.|+... +++.
T Consensus 294 Gpw~k~~~nPVl~ 306 (408)
T 3p2n_A 294 GPYVKSPYNPISN 306 (408)
T ss_dssp CCCEECTTCCSCS
T ss_pred CCcEECCCCCccc
Confidence 899864 4543
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A | Back alignment and structure |
|---|
Probab=99.92 E-value=5.2e-24 Score=223.48 Aligned_cols=171 Identities=20% Similarity=0.251 Sum_probs=135.6
Q ss_pred cceeeeecCCC-------cc-cCCccceEECCEEEEEEeeCCCCC-------------CCCCcEEEEEEecCccCeeecc
Q 011094 118 RTSFHFQPEKN-------WM-NDPNGPLFYKGWYHLFYQYNPDSA-------------VWGNITWGHAVSADLIHWLYLP 176 (494)
Q Consensus 118 Rp~~Hf~P~~g-------wm-NDPNG~~y~~G~YHLFYQ~nP~~~-------------~wg~~~WGHA~S~DLvhW~~~p 176 (494)
+++||.+|..| |+ |||||+++++|+||||||++|... .|+.++|+||+|+||+||++++
T Consensus 70 f~r~~~~Pi~g~~~~~~g~~~~DP~~v~~~dG~yymfY~~~~~~~~G~~~~~~~~~~~~~~~~~i~~a~S~Dlv~W~~~g 149 (404)
T 4ak5_A 70 FFEYKMEPLKGDLAYEEGVVRRDPSAMLKIGDTYYVWYSKSYGPTQGFAGDIEKDKVFPWDRCDIWYATSKDGLTWKEQG 149 (404)
T ss_dssp CCEEEEEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSSCTTTSCCSTTTTCEEEEEEESSSSEEEEEE
T ss_pred hhhcccccccCCcccccceeecCCcEEEEECCEEEEEEEeCCCcccccccccccccccccCccEEEEEECCCCCCceeCc
Confidence 67777666666 87 999999999999999999988411 3678999999999999999999
Q ss_pred eeccCC--CCcCCCcEEeeeEEEccCCeEEEEEeccCCC----ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCC--
Q 011094 177 IAMVPD--QWYDINGVWTGSATILPDGQIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRH-- 248 (494)
Q Consensus 177 ~AL~Pd--~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~----~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g-- 248 (494)
.+|.|+ ..||..+||+++|+. .+|+++|+||+.... ..+.+++|+|++.. ..|++. ++||+.+.+.
T Consensus 150 ~~L~~~~~~~wd~~gv~aP~Vi~-~~Gkyym~Yt~~~~~~~~~~~~~IgvA~Sdsp~----Gpwt~~-~~Pvl~~~~~~~ 223 (404)
T 4ak5_A 150 IAVKRGEKGAYDDRSVFTPEVME-WKGKYYLCYQAVKSPYTVRVKNTIGMACADSPE----GLWTKT-DKPVLEPSDTGE 223 (404)
T ss_dssp EEECCCSTTSTTSSEEEEEEEEE-ETTEEEEEEEEECSCCCTTCCCEEEEEEESSTT----CCCEEC-SSCSBCCCSCCE
T ss_pred eEeecCCCCccccCCEEeeEEEE-ECCEEEEEEEeccCCCCCCCcceEEEEEEeCCC----CCceEC-CCceecCCCCcc
Confidence 999985 478999999999975 699999999997642 34678999998743 479995 6899986432
Q ss_pred ----------------CCCCCCCCCeeEeecCCCeEEEEEeeec-C----C---eeEEEEEEeCCCC-CCEEc
Q 011094 249 ----------------IGPKDFRDPTTAWAGPDGKWRLTIGSKI-G----K---TGISLVYQTTDFK-TYELL 296 (494)
Q Consensus 249 ----------------~~~~~fRDP~V~w~~~dg~w~MviGa~~-~----~---~G~v~lY~S~Dl~-~W~~~ 296 (494)
++...++||.|+ + .+|+|||++.+.. + . .-++.+..|+|+. .|+..
T Consensus 224 W~~ddd~~~~~~~~~~wD~~~~~~P~v~-~-~~g~yyl~Ysg~~~~~~~~~~~~~~~igvA~Sdd~~Gpw~k~ 294 (404)
T 4ak5_A 224 WEGDEDNRFKVVSKGDFDSHKVHDPCII-P-YNGKFYMYYKGERMGEEITWGGREIKHGVAIAENPMGPYVKS 294 (404)
T ss_dssp ECSSSSCTTCEEECCSTTSSEEEEEEEE-E-ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTTCCCEEC
T ss_pred eeeccCceeeeccCCcccCCcEECCEEE-E-ECCEEEEEEECCCCCCccccCCCcceEEEEEECCCCCCcEEC
Confidence 123456899995 3 5899999998652 1 1 1267889999986 79875
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-23 Score=215.96 Aligned_cols=188 Identities=12% Similarity=0.047 Sum_probs=145.3
Q ss_pred CCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeec-ceeccCC--CCcCCCcE-EeeeEEEccCCe
Q 011094 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYL-PIAMVPD--QWYDINGV-WTGSATILPDGQ 202 (494)
Q Consensus 127 ~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~-p~AL~Pd--~~~D~~Gv-~SGSavv~~dG~ 202 (494)
.|.+| +|+++++|+||||||.++. ++.++||||+|+|++||++. +++|.|+ ..++..|| |+++++. .+|+
T Consensus 54 ~gv~n--~~~i~~~g~~~lfY~~~~~---~~~~~~~~A~S~Dgi~w~~~~~pvl~p~~~~~~~~~g~~yDP~v~~-~~d~ 127 (338)
T 1vkd_A 54 ARVFN--SAVVPYNGEFVGVFRIDHK---NTRPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYAYDPRVVK-IEDT 127 (338)
T ss_dssp EEEEE--EEEEEETTEEEEEEEEEET---TSCEEEEEEEESSSSSCEECSSCCCEECTTSCBCCCSSEEEEEEEE-ETTE
T ss_pred CeEEc--cEEEEECCEEEEEEEEECC---CCcEEEEEEEeCCCCccEECCCCEEeCCCCCccccCCEEeCcEEEE-ECCE
Confidence 45556 5789999999999999984 46789999999999999988 4788887 67888999 8999975 6899
Q ss_pred EEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeec-CCCeEEEEEeeec---CC
Q 011094 203 IVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAG-PDGKWRLTIGSKI---GK 278 (494)
Q Consensus 203 ~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~-~dg~w~MviGa~~---~~ 278 (494)
++|+||+ .. ..+.|++|.|+|+ ++|+|. .+++ .+ +.|||.+ |.+ .+|+|+|+.+.+. +.
T Consensus 128 yym~yt~-~~-~~~~i~la~S~Dl-----~~W~~~--~~i~-~~------~~rd~~~-fp~~i~Gky~m~~~~q~~~~~~ 190 (338)
T 1vkd_A 128 YYITFCT-DD-HGPTIGVGMTKDF-----KTFVRL--PNAY-VP------FNRNGVL-FPRKINGKYVMLNRPSDNGHTP 190 (338)
T ss_dssp EEEEEEE-ES-SSEEEEEEEESSS-----SSEEEE--CCSS-SS------SEEEEEE-CSSCBTTBEEEEEEECCSSSCS
T ss_pred EEEEEEE-cC-CcceEEEEEECCC-----CeEEEC--CccC-CC------cCCceEE-EEEEECCEEEEEEEecCCCCCC
Confidence 9999999 54 4578999999985 899996 3343 21 4689977 653 3899999997652 35
Q ss_pred eeEEEEEEeCCCCCCEEcCcccccCCCCC-ceE------eccEEEecccCccccccccCCCCeEEEEEeeeCC--CceeE
Q 011094 279 TGISLVYQTTDFKTYELLDEYLHAVPGTG-MWE------CVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD--TKVDH 349 (494)
Q Consensus 279 ~G~v~lY~S~Dl~~W~~~~~ll~~~~~~g-mwE------CPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~--~~~~~ 349 (494)
.|.+.+++|+||.+|+..+.++.. ..+ ||| ||+.|++++ .|+|..+... .+...
T Consensus 191 ~~~I~~a~S~Dl~~W~~~~~l~~~--~~~~~wE~~~ig~gp~~i~~~~---------------gwll~y~G~~~~~~~~~ 253 (338)
T 1vkd_A 191 FGDIFLSESPDMIHWGNHRFVLGR--SSYNWWENLKIGAGPYPIETSE---------------GWLLIYHGVTLTCNGYV 253 (338)
T ss_dssp CCCEEEEEESSSSCBEEEEEEECC--CSSCGGGSSEEEECSCCEEETT---------------EEEEEEEEEEEETTEEE
T ss_pred CcEEEEEEcCCcccCCcCceEEcC--CCCCCcccCccccCCCcEEeCC---------------cEEEEEecccCCCCCcE
Confidence 678999999999999987776643 234 899 699998852 3666554321 12456
Q ss_pred EEEEE
Q 011094 350 YAIGT 354 (494)
Q Consensus 350 Y~iG~ 354 (494)
|.+|-
T Consensus 254 Y~~G~ 258 (338)
T 1vkd_A 254 YSFGA 258 (338)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88886
|
| >3qz4_A Endo-1,4-beta-xylanase D; 5-bladed beta-propeller fold, xylan degradation, structural joint center for structural genomics, JCSG; HET: EPE; 1.74A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.9e-22 Score=203.60 Aligned_cols=190 Identities=16% Similarity=0.191 Sum_probs=142.9
Q ss_pred CCcccCCccceEEC--CEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC--CcCCCcEEeeeEEEcc---
Q 011094 127 KNWMNDPNGPLFYK--GWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ--WYDINGVWTGSATILP--- 199 (494)
Q Consensus 127 ~gwmNDPNG~~y~~--G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~--~~D~~Gv~SGSavv~~--- 199 (494)
.||++||+ +++.+ |+||||+++.+. +.|+.++|+|++|+||+||+..+.+|.+.. .++..++|+++++..+
T Consensus 12 ~g~~~DP~-i~~~~~dg~yyl~~t~~~~-~~~~~~~~~~~~S~DLv~W~~~g~~l~~~~~~~~~~~~~wAP~v~~~~~~~ 89 (311)
T 3qz4_A 12 PGFHADPE-VLYSHQTKRYYIYPTSDGF-PGWGGSYFKVFSSKNLKTWKEETVILEMGKNVSWANGNAWAPCIEEKKIDG 89 (311)
T ss_dssp SSSEEEEE-EEEETTTTEEEEEEEECSS-GGGCCCEECCEEESSSSSCEECCCCEEBTTTBTTEEEEEEEEEEEEEEETT
T ss_pred CCCcCCce-EEEECCCCEEEEEEecCCC-CCCCCcEEEEEECCCCCCcEECceecccccCCCcccCCcCCCeeEEeeecC
Confidence 37899999 88887 999999998665 457778899999999999999999987764 5667899999997643
Q ss_pred CCeEEEEEeccCCC-ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecC-CCeEEEEEeeecC
Q 011094 200 DGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGP-DGKWRLTIGSKIG 277 (494)
Q Consensus 200 dG~~~~~YTG~~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~-dg~w~MviGa~~~ 277 (494)
+|+++|+||+.... ..+.+++|+|+|.. ..|++ .++||+...+. +..++|||+++ .++ ||++||++|+
T Consensus 90 ~Gkyylyyt~~~~~~~~~~i~va~s~~p~----Gpw~~-~~~p~~~~~~~-g~~~~iDp~vf-~dd~dG~~yl~~g~--- 159 (311)
T 3qz4_A 90 KYKYFFYYSANPTTNKGKQIGVAVADSPT----GPFTD-LGKPIITSSPT-GRGQQIDVDVF-TDPVSGKSYLYWGN--- 159 (311)
T ss_dssp EEEEEEEEEEEETTCSSCEEEEEEESSTT----CCCEE-CSSCSBCSCTT-SSSBSCCCEEE-ECTTTCCEEEEECB---
T ss_pred CCEEEEEEEeccCCCCCeeEEEEEECCCC----CCceE-CCcceEcCCCC-CCcccccccEE-EECCCCcEEEEEcC---
Confidence 99999999997543 35788999998763 58999 46788865322 13578999995 455 8999999986
Q ss_pred CeeEEEEEE-eCCCCCCEEcCcccccCCC-----CCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCC
Q 011094 278 KTGISLVYQ-TTDFKTYELLDEYLHAVPG-----TGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT 345 (494)
Q Consensus 278 ~~G~v~lY~-S~Dl~~W~~~~~ll~~~~~-----~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~ 345 (494)
|.+.+.+ ++|+.+|.-....+....+ ..+.|||.+|+.+ .+++|..|....
T Consensus 160 --~~i~~~~l~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~---------------g~YyL~~s~~~~ 216 (311)
T 3qz4_A 160 --GYMAGAELNDDMLSIKEETTVVLTPKGGTLQTYAYREAPYVIYRK---------------GIYYFFWSVDDT 216 (311)
T ss_dssp --SSCEEEEBCTTSSSBCGGGCEECCCCCCCTTTTCCCEEEEEEEET---------------TEEEEEEEESCT
T ss_pred --CCEEEEEeCCcccccCCCceEEeCCCCCcccccceeeccEEEEEC---------------CEEEEEEEcCCC
Confidence 2344555 8888887643222221111 2379999999985 277787776543
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-21 Score=202.35 Aligned_cols=149 Identities=19% Similarity=0.235 Sum_probs=115.8
Q ss_pred cceEECCEEEEEEeeCCCCCC---CCCcEEEEEEecCccCeeecc-eeccCCCCcCC-----CcEEeeeEEEccCCeEEE
Q 011094 135 GPLFYKGWYHLFYQYNPDSAV---WGNITWGHAVSADLIHWLYLP-IAMVPDQWYDI-----NGVWTGSATILPDGQIVM 205 (494)
Q Consensus 135 G~~y~~G~YHLFYQ~nP~~~~---wg~~~WGHA~S~DLvhW~~~p-~AL~Pd~~~D~-----~Gv~SGSavv~~dG~~~~ 205 (494)
|+++++|+||||||.++.... ++.++||||+|+|++||++.+ ++|.|+..++. .||++++++..+||+++|
T Consensus 57 ~ai~~dGky~LfY~~~~~~~~~~~~~~~~ig~A~S~DGi~w~~~~~Pvl~P~~~~~~~~e~~~gv~DP~v~~~edG~yym 136 (364)
T 3qc2_A 57 AATLYNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDGTHFQREKTPVFYPDNDSQKELEWPGGCEDPRIAVTDDGLYVM 136 (364)
T ss_dssp EEEEETTEEEEEEEEECSSSSSTTCSCEEEEEEEESSSSSCEECSSCSBCCCSSTTHHHHTTTEEEEEEEEECTTSCEEE
T ss_pred eEEEECCEEEEEEEEECCCCcccCCCceEEEEEEeCCCceeeEcCcCeEcCCCccccccccCCcEECCEEEEeCCCEEEE
Confidence 478899999999999987643 367999999999999999865 78899887664 799999998656899999
Q ss_pred EEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCC--CCCCCCCCCCeeE--------e-ecCCCeEEEEEee
Q 011094 206 LYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR--HIGPKDFRDPTTA--------W-AGPDGKWRLTIGS 274 (494)
Q Consensus 206 ~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~--g~~~~~fRDP~V~--------w-~~~dg~w~MviGa 274 (494)
+||+... ..+.|++|+|+|+ ++|+|. .+++.+.. .+.....+|+.++ + .+.+|+|+|+.|.
T Consensus 137 ~Yta~~~-~~~~i~lA~S~Dl-----~~W~k~--g~i~~p~~~g~f~~~~~kd~~i~~~~r~~~lfp~ki~GkY~M~~g~ 208 (364)
T 3qc2_A 137 MYTQWNR-HVPRLAVATSRNL-----KDWTKH--GPAFAKAFDGKFFNLGCKSGSILTEVVKGKQVIKKVNGKYFMYWGE 208 (364)
T ss_dssp EEEEECS-SCEEEEEEEESSS-----SSCEEE--EETTSSHHHHTTTTCCCCCEEEEEEEETTEEEECEETTEEEEEECS
T ss_pred EEEecCC-CCeEEEEEEECCC-----CEEEEe--eeccCccccccccccccccceeeeeccccceeeEEECCEEEEEEcC
Confidence 9999754 3578999999995 899997 35553310 1112244677662 1 2468999999862
Q ss_pred ecCCeeEEEEEEeCCCCCCEEc
Q 011094 275 KIGKTGISLVYQTTDFKTYELL 296 (494)
Q Consensus 275 ~~~~~G~v~lY~S~Dl~~W~~~ 296 (494)
+.+.+++|+||++|+..
T Consensus 209 -----~~I~la~S~Dl~~W~~~ 225 (364)
T 3qc2_A 209 -----EHVFAATSDDLIHWTPI 225 (364)
T ss_dssp -----SSBEEEEESSSSSEEEC
T ss_pred -----CeEEEEeCCCcccceEc
Confidence 56778999999999974
|
| >3qee_A Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; 5-bladed beta propeller, hydrolase; 1.64A {Cellvibrio japonicus} PDB: 3qed_A* 3qef_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-20 Score=190.62 Aligned_cols=198 Identities=15% Similarity=0.110 Sum_probs=144.0
Q ss_pred CcccCCccceEECCEEEEEEeeCCCC---CCCCCcEEEEEEecCccCeeecceeccCC-CCcCCCcEEeeeEEEccCCeE
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDS---AVWGNITWGHAVSADLIHWLYLPIAMVPD-QWYDINGVWTGSATILPDGQI 203 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~---~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd-~~~D~~Gv~SGSavv~~dG~~ 203 (494)
.+.+||+. +.++|+||||+++.+.. ..++...|.+++|+||+||+..+.+|.+. ..|+..++|+++++. .||++
T Consensus 10 ~~~~DP~i-~~~~g~yYl~~t~~~~~~~~~~~~~~~~~v~~S~DLv~W~~~g~~l~~~~~~~~~~~~WAP~i~~-~~Gky 87 (307)
T 3qee_A 10 VFTADPAA-LVHKGRVYLYAGRDEAPDNTTFFVMNEWLVYSSDDMANWEAHGPGLRAKDFTWAKGDAWASQVIE-RNGKF 87 (307)
T ss_dssp SEEEEEEE-EEETTEEEEEEEEECCSSSSSCCCEEEEEEEEESSSSSCEEEEEEEEGGGSTTEEEEEEEEEEEE-ETTEE
T ss_pred CccCCCce-EEECCEEEEEEccCcccCCccccccCcEEEEECCCCCCceECccccccCCCCcccCCccCceEEE-ECCEE
Confidence 36799995 55899999999987753 35566889999999999999999998864 356678999999975 79999
Q ss_pred EEEEeccCCCc--cceEEEEEEcCCCCCCcceEEEcCCCceecCCC-C--CCCCCCCCCeeEeecCCCeEEEEEeeecCC
Q 011094 204 VMLYTGSTDKS--VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR-H--IGPKDFRDPTTAWAGPDGKWRLTIGSKIGK 278 (494)
Q Consensus 204 ~~~YTG~~~~~--~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~-g--~~~~~fRDP~V~w~~~dg~w~MviGa~~~~ 278 (494)
+|+||+...+. .+.+++|+|++.. ..|++..++|++.... . ....+++||+++ .++||++||++|+.
T Consensus 88 ylyyt~~~~~~~~~~~i~va~s~~p~----Gpw~~~~~~pl~~~~~~~~~~~~~~~iDp~vf-~DddG~~Yl~~g~~--- 159 (307)
T 3qee_A 88 YWYVTVRHDDTKPGFAIGVAVGDSPI----GPFKDALGKALITNDMTTDTPIDWDDIDPSVF-IDDDGQAYLFWGNT--- 159 (307)
T ss_dssp EEEEEEEECTTSCSEEEEEEEESSTT----CCCEESSSSCSBCGGGCCSSCCSCCSCCCEEE-ECTTSCEEEEECSS---
T ss_pred EEEEEeccCCCCCceEEEEEEECCCC----CCCEeCCCCeeEecCccccCCCCcCcccCceE-ECCCCCEEEEEeCC---
Confidence 99999986432 3678999998753 5899955678876311 1 112358999995 45789999999864
Q ss_pred eeEEEEEEeCCCCCCEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCCceeEEEEE
Q 011094 279 TGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIG 353 (494)
Q Consensus 279 ~G~v~lY~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~~~~~Y~iG 353 (494)
++.++--|+|+.+|.-....+.. ..+++|||.+|+.+ .+++|..|........|+..
T Consensus 160 -~i~~~~l~~d~~~~~g~~~~i~~--~~~~~EgP~i~k~~---------------g~YyL~~s~~~~~~~~~~~s 216 (307)
T 3qee_A 160 -RPRYAKLKKNMVELDGPIRAIEG--LPEFTEAIWVHKYQ---------------DNYYLSYAMGFPEKIGYAMG 216 (307)
T ss_dssp -SCEEEEECTTSSSEEEEEEECCC--CTTEEEEEEEEECC----------------CEEEEEEETTTTEEEEEEE
T ss_pred -cEEEEEECCccccccCceEEeCC--CCCccCceEEEEEC---------------CEEEEEEECCCCcEEEEEEC
Confidence 33333448899988643322221 23589999999985 26777777654444455554
|
| >3vss_A Beta-fructofuranosidase; glycoside hydrolase family 68, beta-propeller, hydrolase; HET: FRU; 1.97A {Arthrobacter} PDB: 3vsr_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1e-20 Score=202.06 Aligned_cols=188 Identities=16% Similarity=0.182 Sum_probs=132.7
Q ss_pred ccCCcc-ceEECCEEEEEEeeCCCCCCC----CCcEEEEEEec---------CccCeeecceeccCCC--------CcCC
Q 011094 130 MNDPNG-PLFYKGWYHLFYQYNPDSAVW----GNITWGHAVSA---------DLIHWLYLPIAMVPDQ--------WYDI 187 (494)
Q Consensus 130 mNDPNG-~~y~~G~YHLFYQ~nP~~~~w----g~~~WGHA~S~---------DLvhW~~~p~AL~Pd~--------~~D~ 187 (494)
+.|+.| ++-++|+.++|++..+....| .+...||..++ |+.||++.+.++.++. .++.
T Consensus 80 lqd~~g~~~~~~Gy~lvf~L~a~~~~~~~drH~~a~iglfy~k~G~~~~~s~d~~~W~~~G~vf~~~~~~~~~~~~~~~~ 159 (496)
T 3vss_A 80 LTDEDANQYSVNGWEIIFSLVADRNLGFDDRHVFAKIGYFYRPAGVPAAERPENGGWTYGGLVFKEGVTGQIFEDQSFSH 159 (496)
T ss_dssp EECTTCCBEEETTEEEEEEEEEETTSCGGGGGGGCEEEEEEEESSCCTTTSCTTCCCEEEEESSCTTSGGGGCSCTTCSE
T ss_pred eECCCCCEEEECCEEEEEEEEcCCCCCCCcCcceeEEeeeeccCCcccccCcccCCcEECccccCCCCCcccccCCCccC
Confidence 467776 677899999999976654433 34667896555 5679999998775542 2233
Q ss_pred CcEEeeeEEEccCCeEEEEEeccCC--------CccceEEEEEEcCC--CCCCcceEEEcCCCceecCCCC--------C
Q 011094 188 NGVWTGSATILPDGQIVMLYTGSTD--------KSVQVQNLAYPADP--SDPLLLDWVKYPGNPVLVPPRH--------I 249 (494)
Q Consensus 188 ~Gv~SGSavv~~dG~~~~~YTG~~~--------~~~q~q~lA~S~D~--~d~lL~~W~K~~~nPVi~~p~g--------~ 249 (494)
..-||||||+.+||+++||||+... ...+.|+||.+... .+...+.|++.+.+++|..+.+ .
T Consensus 160 ~~eWSGSAi~~~DG~i~LFYT~v~~~~~~~g~~~~~~~Q~ia~A~~~i~~d~dgv~~~~~~~~~~l~~~DG~~Yqt~~q~ 239 (496)
T 3vss_A 160 QTQWSGSARVSKNGEIKLFFTDVAFYRNSDGTNIKPYDPRIALSVGKVKANKKGVTLTGFNKVTDLLQADGTYYQTGAQN 239 (496)
T ss_dssp EEEEEEEEEECTTCEEEEEEEEEEECBCTTSCBSSCCEEEEEEEEEEEEEETTEEEEEEEEEEEEEECCCSSSBCCTTTC
T ss_pred CceEecceEECCCCeEEEEEEEeecccCCCccccccceeEEEEEeeeeeecCCcceEeccCCCcccccCChhhhhccccc
Confidence 4579999998889999999998741 12356777764310 0112378888877777754432 1
Q ss_pred CCCCCCCCeeEeec--CCCeEEEEEeeec-----------------------------------CCeeEEEEE--EeCCC
Q 011094 250 GPKDFRDPTTAWAG--PDGKWRLTIGSKI-----------------------------------GKTGISLVY--QTTDF 290 (494)
Q Consensus 250 ~~~~fRDP~V~w~~--~dg~w~MviGa~~-----------------------------------~~~G~v~lY--~S~Dl 290 (494)
...+||||+| |++ .+|.+||++.+.. ...|+|.|+ +|+|+
T Consensus 240 ~~~~fRDP~v-f~DP~~dG~~YLVFEgnT~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~anG~IGLa~~~s~D~ 318 (496)
T 3vss_A 240 EFFNFRDPFT-FEDPAHPGETFMVFEGNSAMQRETATCNEADLGYRQGDPYAETVDDVNASGATYQIGNVGLAKAKNKQL 318 (496)
T ss_dssp TTCCCEEEEE-ECCTTSTTCCEEEEEEEBSSCGGGCCCCHHHHCCCTTCTTCCCHHHHHHHTGGGCEEEEEEEEESSTTS
T ss_pred cccccCCCee-EecCCCCCcEEEEEecccCCcCccccccccccccccccccccccccccccccccccceEEEEEccCCCC
Confidence 3468999999 554 4688899986531 024766554 68999
Q ss_pred CCCEEcCcccccCCCCCceEeccEEEec
Q 011094 291 KTYELLDEYLHAVPGTGMWECVDFYPVA 318 (494)
Q Consensus 291 ~~W~~~~~ll~~~~~~gmwECPdlf~l~ 318 (494)
..|++.++|+.+....+|||||++|+++
T Consensus 319 ~~We~~~PL~~a~~v~deiErP~vf~~d 346 (496)
T 3vss_A 319 TEWEFLPPILSANCVTDQTERPQIYFKD 346 (496)
T ss_dssp CCEEEEEEEEEEETTBSCCEEEEEEEET
T ss_pred CccEEeCccccCCCCCCceeCCcEEEEC
Confidence 9999999998765556799999999996
|
| >1gyh_A Arabinan endo-1,5-alpha-L-arabinosidase A; arabinanase, hydrolase, propeller, catalysis, pseudomonas; 1.89A {Cellvibrio cellulosa} SCOP: b.67.2.1 PDB: 1gyd_B 1gye_B* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-19 Score=182.43 Aligned_cols=182 Identities=15% Similarity=0.119 Sum_probs=130.0
Q ss_pred cccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcC-------CCcEEeeeEEEccCC
Q 011094 129 WMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYD-------INGVWTGSATILPDG 201 (494)
Q Consensus 129 wmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D-------~~Gv~SGSavv~~dG 201 (494)
+++||+ +++++|+||||++. ..|+|++|+||+||+..+.||.+...|+ ..++|+++++. .+|
T Consensus 6 ~~~DP~-i~~~~g~yyl~~t~---------~~i~~~~S~DL~~W~~~g~~l~~~~~~~~~~~~~~~~~~wAP~v~~-~~g 74 (318)
T 1gyh_A 6 DVHDPV-MTREGDTWYLFSTG---------PGITIYSSKDRVNWRYSDRAFATEPTWAKRVSPSFDGHLWAPDIYQ-HKG 74 (318)
T ss_dssp CCSSCE-EEEETTEEEEEESE---------ETCEEEEESSSSEEEEEEESSSSCCTTHHHHCTTCCSEEEEEEEEE-ETT
T ss_pred ecCCCE-EEEECCEEEEEECC---------CCcEEEECCCCCCccCCCcccCCCcccccccCCCcCcccccCeEEE-ECC
Confidence 689999 57889999999997 2489999999999999999998876555 47899999975 699
Q ss_pred eEEEEEeccCCC-ccceEEEEEEcCCCCCCcc--eEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCC
Q 011094 202 QIVMLYTGSTDK-SVQVQNLAYPADPSDPLLL--DWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK 278 (494)
Q Consensus 202 ~~~~~YTG~~~~-~~q~q~lA~S~D~~d~lL~--~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~ 278 (494)
+++|+||+.... ..+.+++|+|++. ||..- .|++. ++|+...+.....+++||+|+ .+++|++||++|+..
T Consensus 75 ~~ylyyt~~~~~~~~~~igva~s~~~-dp~gp~~~w~~~--~~v~~~~~~~~~~~~iDp~vf-~D~dG~~Yl~~g~~~-- 148 (318)
T 1gyh_A 75 LFYLYYSVSAFGKNTSAIGVTVNKTL-NPASPDYRWEDK--GIVIESVPQRDLWNAIAPAII-ADDHGQVWMSFGSFW-- 148 (318)
T ss_dssp EEEEEEEECCTTSCCEEEEEEEESCS-CTTSTTCCCEEE--EEEEEECTTTCSSCCCCCEEE-ECTTSCEEEEECBST--
T ss_pred EEEEEEEeccCCCCcceEEEEEeCCC-CCCCCCcceecC--CcccccCCCCCCCCcccCCeE-ECCCCCEEEEeeccC--
Confidence 999999987543 3467889999872 33211 29885 466654223233468999995 457899999998742
Q ss_pred eeEEEEEE-eCC------CCCCEEc--C--c--ccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeC
Q 011094 279 TGISLVYQ-TTD------FKTYELL--D--E--YLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (494)
Q Consensus 279 ~G~v~lY~-S~D------l~~W~~~--~--~--ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~ 343 (494)
+.+.+++ +.| +..|+.. + . +........++|||.+|+.++ +++|..|..
T Consensus 149 -~~i~~~~l~~d~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~g---------------~yYL~~s~~ 210 (318)
T 1gyh_A 149 -GGLKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEAPFILRKGD---------------YYYLFASWG 210 (318)
T ss_dssp -TCEEEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTTSCCSCCEEEEEEEEETT---------------EEEEEEEES
T ss_pred -CCEEEEEeCCccccccceeecceecccCcceeecccCCCCcceeccEEEEECC---------------EEEEEEEeC
Confidence 2344566 455 3467643 1 1 111112345899999999852 677777753
|
| >1uv4_A Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hydrolase, propeller, catalysis; 1.50A {Bacillus subtilis} SCOP: b.67.2.1 | Back alignment and structure |
|---|
Probab=99.82 E-value=9.4e-19 Score=174.58 Aligned_cols=183 Identities=15% Similarity=0.060 Sum_probs=130.5
Q ss_pred cccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcC-------CCcEEeeeEEEccCC
Q 011094 129 WMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYD-------INGVWTGSATILPDG 201 (494)
Q Consensus 129 wmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D-------~~Gv~SGSavv~~dG 201 (494)
+++||+ ++.++|+||||++..+. ...|.+++|+||+||+..+.+|.+...|+ ..++|+++++. .||
T Consensus 11 ~~~DP~-i~~~~g~yYl~~t~~~~-----~~~i~i~~S~DLv~W~~~g~~l~~~~~w~~~~~~~~~~~~wAP~v~~-~~G 83 (293)
T 1uv4_A 11 LLHDPT-MIKEGSSWYALGTGLTE-----ERGLRVLKSSDAKNWTVQKSIFTTPLSWWSNYVPNYGQNQWAPDIQY-YNG 83 (293)
T ss_dssp ECSSCE-EEEETTEEEEEEECCTT-----SSBEEEEEESSSSSCEEEEEETSSCCGGGGGTSTTCCSBCEEEEEEE-ETT
T ss_pred cCCCCe-EEEECCEEEEEEcCCCC-----CCceEEEECCCCCCccCCCccCCCCCcccccccccCCCceecceEEE-ECC
Confidence 578999 56679999999998652 35799999999999999999998875443 46899999975 699
Q ss_pred eEEEEEeccCCC-ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCee
Q 011094 202 QIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTG 280 (494)
Q Consensus 202 ~~~~~YTG~~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G 280 (494)
+++|+||+.... ..+.+++|+|+|+. -..|++. .+++..++. ...+++||.++ .+++|++||+.|+.. .|
T Consensus 84 ~yylyyt~~~~~~~~~~i~va~s~~p~---~Gpw~~~--~~~l~~~~~-~~~~~iDp~vf-~d~dG~~Yl~~g~~~--~~ 154 (293)
T 1uv4_A 84 KYWLYYSVSSFGSNTSAIGLASSTSIS---SGGWKDE--GLVIRSTSS-NNYNAIDPELT-FDKDGNPWLAFGSFW--SG 154 (293)
T ss_dssp EEEEEEEECCTTCSCEEEEEEEESCTT---TTCCEEE--EEEEEECTT-SSSCCCSCEEE-ECTTSCEEEEECBST--TC
T ss_pred EEEEEEEecCCCCCcceEEEEECCCCC---CCCCccC--CccEecCCC-CCCCCCCCCeE-ECCCCCEEEEEEecC--CC
Confidence 999999987543 34678999998751 1379985 344443221 23478999995 457899999998642 23
Q ss_pred EEEEEE-eCCCCCCEEcCc-ccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeC
Q 011094 281 ISLVYQ-TTDFKTYELLDE-YLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (494)
Q Consensus 281 ~v~lY~-S~Dl~~W~~~~~-ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~ 343 (494)
+.+++ ++|+..+.-... +.....+..++|||.+|+.++ +++|..|..
T Consensus 155 -i~~~~l~~d~~~~~g~~~~i~~~~~~~~~~EgP~i~k~~g---------------~yyL~~s~~ 203 (293)
T 1uv4_A 155 -IKLTKLDKSTMKPTGSLYSIAARPNNGGALEAPTLTYQNG---------------YYYLMVSFD 203 (293)
T ss_dssp -EEEEEECTTTCSEEEEEEEEECCTTTTTCEEEEEEEEETT---------------EEEEEEEEE
T ss_pred -EEEEEECchhCccCCcceEEeecCCCCCccCccEEEEECC---------------EEEEEEEeC
Confidence 44555 677766542211 222222345899999999852 677777754
|
| >3kst_A Endo-1,4-beta-xylanase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.1e-19 Score=181.08 Aligned_cols=198 Identities=16% Similarity=0.137 Sum_probs=142.0
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEE-ccCCeEEEE
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATI-LPDGQIVML 206 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv-~~dG~~~~~ 206 (494)
=..-||+ ++.++|+||||++..+. ....|.+++|+||+||+..+.+|.+...++..++|+++++. ..+|+++|+
T Consensus 22 ~~~~DP~-i~~~~g~yyl~~t~~~~----~~~~i~~~~S~DLv~W~~~g~~l~~~~~~~~~~~wAP~v~~~~~~g~~yl~ 96 (306)
T 3kst_A 22 LPIADPY-VMFYNNKYYAYGTGGTT----AGEGFACFSSDDLKNWKREGQALSATDSYGTWGFWAPEVYYVESKKKFYLF 96 (306)
T ss_dssp BCCEEEE-EEEETTEEEEEEESCCS----SSSEEEEEEESSSSEEEEEEEEEEGGGSSCSSCCEEEEEEEETTTTEEEEE
T ss_pred ccCCCCE-EEEECCEEEEEEecCCc----CCCCEEEEEeCCccccEECceecCCCCcccccccccCeEEEECCCCEEEEE
Confidence 3578999 56669999999997653 23579999999999999999999887777888999999864 349999999
Q ss_pred EeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEE
Q 011094 207 YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQ 286 (494)
Q Consensus 207 YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~ 286 (494)
||+. +.+++|+|++.. ..|++....|++. ...+||.++ .++||++||+.++..++.++.+..-
T Consensus 97 yt~~-----~~i~va~s~~p~----Gpw~~~~~~p~~~-------~~~iDp~vf-~D~dG~~Yl~~~~~~~g~~i~~~~l 159 (306)
T 3kst_A 97 YSAE-----EHICVATSTTPE----GPFRQEVKQPIWS-------EKSIDTSLF-IDDDGTPYLYFVRFTDGNVIWVAQM 159 (306)
T ss_dssp EEET-----TEEEEEEESSTT----CCCBCSSCCCSSS-------SCCEEEEEE-ECTTSCEEEEEEEESSSEEEEEEEB
T ss_pred EECC-----CcEEEEEcCCCC----CCcEeCCCccccC-------CCcccceEE-EeCCCCEEEEEEEeCCCCEEEEEEe
Confidence 9985 368999998763 5788765566653 467999995 5578999999986544444444445
Q ss_pred eCCCCCCEEcCcc--ccc-----CCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCCce----eEEEEEEe
Q 011094 287 TTDFKTYELLDEY--LHA-----VPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKV----DHYAIGTY 355 (494)
Q Consensus 287 S~Dl~~W~~~~~l--l~~-----~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~~~----~~Y~iG~~ 355 (494)
|+|+.+|...... ... ..+..++|||.+|+.+ .+++|..|...... ..|+..+
T Consensus 160 s~d~~~~~~~~~~~~~~~~~~w~~~~~~~~EgP~i~k~~---------------G~YYL~~S~~~~~~~~y~v~~a~S~- 223 (306)
T 3kst_A 160 TDDLMSIKTETLNQCIKAEVSWELLQGKVAEGPSLLKKN---------------GVYYLIYSANHYENKGYGVGYATSD- 223 (306)
T ss_dssp CTTSSCBCGGGCEEEECCCSGGGCSSSSBEEEEEEEEET---------------TEEEEEEEESCTTSTTCEEEEEEES-
T ss_pred CcccccccCcceeeeccCCccceecCCCceecceEEEEC---------------CEEEEEEEeCCCCCCCceEEEEEeC-
Confidence 8999998743321 111 1124589999999985 27777777654222 2244332
Q ss_pred cCCCCcccC
Q 011094 356 NPANDKWTP 364 (494)
Q Consensus 356 d~~~~~f~p 364 (494)
...+.|+.
T Consensus 224 -s~~GPw~~ 231 (306)
T 3kst_A 224 -TPMGPWVK 231 (306)
T ss_dssp -STTCCCEE
T ss_pred -CCCCCCEe
Confidence 33456764
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.5e-19 Score=183.87 Aligned_cols=146 Identities=22% Similarity=0.301 Sum_probs=112.3
Q ss_pred CCccceEECCEEEEEEeeCCCCCC---CCCcEEEEEEecCccCeeecc-eeccCCCCcC-----CCcEEeeeEEEccCCe
Q 011094 132 DPNGPLFYKGWYHLFYQYNPDSAV---WGNITWGHAVSADLIHWLYLP-IAMVPDQWYD-----INGVWTGSATILPDGQ 202 (494)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~---wg~~~WGHA~S~DLvhW~~~p-~AL~Pd~~~D-----~~Gv~SGSavv~~dG~ 202 (494)
+| ++++++|+||||||.++.... ++.++||||+|+|++||++.+ ++|.|+..++ ..+|++++++..+||+
T Consensus 52 sg-sai~~dG~y~lfYtg~~~~~~~~~~~~~~ig~A~S~Dgi~w~~~~~pvl~p~~~~~~~~~~~~~~~DP~v~~~~dg~ 130 (356)
T 3taw_A 52 NP-AATIYDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDGIHFERDTKPAFYPAKDNQAENECPGGTEDPRIAMTEDGT 130 (356)
T ss_dssp EE-EEEEETTEEEEEEEEECSSSCSTTSSCEEECCEEESSSSSCEECSSCSBCCCSSTTHHHHTTTEEEEEEEEECTTSC
T ss_pred Cc-EEEEECCEEEEEEEEEcCCCccCCCceeEEEEEEeCCCccceECCcceecCCCccccccccCCceECCEEEEECCCE
Confidence 45 478899999999999987643 246899999999999999854 7788887643 4799999998755899
Q ss_pred EEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCC-----C-----------CeeEeecCCC
Q 011094 203 IVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFR-----D-----------PTTAWAGPDG 266 (494)
Q Consensus 203 ~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fR-----D-----------P~V~w~~~dg 266 (494)
++|+||+... ....+++|.|+|+ ++|++. .+++.++.. .+|| | |.| + ..+|
T Consensus 131 y~m~yt~~~~-~~~~i~la~S~Dl-----~~W~~~--g~i~~~~~~---~~~~~~~~k~~~l~p~~~~g~p~v-~-k~~G 197 (356)
T 3taw_A 131 YVLLYTQWNR-KVPRLAVATSKDL-----KHWTKF--GPAFEKAYN---GKFKDEATKSASLVTTLKGDKQVI-A-KVNG 197 (356)
T ss_dssp EEEEEEEECS-SCEEEEEEEESSS-----SSCEEE--EETTSSHHH---HTTTTSCCCCEEEEEEEETTEEEE-C-CBTT
T ss_pred EEEEEEEeCC-CCceEEEEECCCC-----CCceEe--eeEcCCccc---cccccccCCccEEeecccCCCceE-E-EECC
Confidence 9999999753 3578999999995 899997 355543211 1233 3 233 3 4789
Q ss_pred eEEEEEeeecCCeeEEEEEEeCCCCCCEEc
Q 011094 267 KWRLTIGSKIGKTGISLVYQTTDFKTYELL 296 (494)
Q Consensus 267 ~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~ 296 (494)
+|+|++|. +.|.+++|+|+.+|+..
T Consensus 198 ~y~m~~g~-----~~I~la~S~Dl~~W~~~ 222 (356)
T 3taw_A 198 KYFMYWGE-----KNVYAATSDNLIDWDPL 222 (356)
T ss_dssp BEEEEECS-----SSBEEEEESSSSSCEEC
T ss_pred EEEEEeCC-----ceeeEEECCCcccCeec
Confidence 99999972 45789999999999974
|
| >3cu9_A Intracellular arabinanase; glycosyl hydrolase, high resolution, beta-prope geobacillus stearothermophilus, hydrolase; HET: GOL; 1.06A {Geobacillus stearothermophilus} PDB: 3d61_A* 3d60_A 3d5y_A 3d5z_A* 1wl7_A | Back alignment and structure |
|---|
Probab=99.78 E-value=6.6e-18 Score=170.18 Aligned_cols=181 Identities=20% Similarity=0.185 Sum_probs=127.3
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcC--------CCcEEeeeEEEcc
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYD--------INGVWTGSATILP 199 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D--------~~Gv~SGSavv~~ 199 (494)
.+++||+ +++++|+||||++. ..|+|++|+||+||+..+.+|.+...|+ ..++|+++++. .
T Consensus 22 ~~~~DP~-i~~~~g~yYl~~t~---------~~i~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~~~wAP~v~~-~ 90 (314)
T 3cu9_A 22 LWAHDPV-IAKEGSRWYVFHTG---------SGIQIKTSEDGVHWENMGWVFPSLPDWYKQYVPEKDEDHLWAPDICF-Y 90 (314)
T ss_dssp CBCSSCE-EEEETTEEEEEESE---------ETSEEEEESSSSEEEEEEESCSSCCTTHHHHCTTCCSCEEEEEEEEE-E
T ss_pred cCcCCCE-EEEECCEEEEEECC---------CCeeEEECcCCCCccCCCcccCCcchhhhccCCCcccCceecCcEEE-E
Confidence 4689998 58889999999986 2489999999999999999998876554 47899999975 6
Q ss_pred CCeEEEEEeccCCC-ccceEEEEEEcCCCCCCcc--eEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec
Q 011094 200 DGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLL--DWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI 276 (494)
Q Consensus 200 dG~~~~~YTG~~~~-~~q~q~lA~S~D~~d~lL~--~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~ 276 (494)
+|+++|+||+.... ..+.+++|+|++. ||..- +|++. .+++..+.. ...++|||.++ .+++|++||++|+..
T Consensus 91 ~g~yylyyt~~~~~~~~~~igva~s~~~-dP~gp~~~w~~~--~~~~~~~~~-~~~~~iDp~vf-~D~dG~~Yl~~g~~~ 165 (314)
T 3cu9_A 91 NGIYYLYYSVSTFGKNTSVIGLATNQTL-DPRDPDYEWKDM--GPVIHSTAS-DNYNAIDPNVV-FDQEGQPWLSFGSFW 165 (314)
T ss_dssp TTEEEEEEEECCTTCCCEEEEEEEESCS-CTTSTTCCCEEE--EEEEEECTT-SSSCCCSCEEE-ECTTSCEEEEECBST
T ss_pred CCEEEEEEEeccCCCCCceEEEEEeCCC-CCCCCCcCcccC--CeEecCCCC-CCCCccCCCeE-EcCCCCEEEEEeccC
Confidence 99999999987532 3567899999772 33221 49985 456654322 23468999995 457899999998742
Q ss_pred CCeeEEEEEE-eCCCCC----CEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeC
Q 011094 277 GKTGISLVYQ-TTDFKT----YELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (494)
Q Consensus 277 ~~~G~v~lY~-S~Dl~~----W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~ 343 (494)
.| +.+++ +.|... |+.. .+.....+..++|||.+|+.++ +++|..|..
T Consensus 166 --~~-i~~~~l~~d~~~~~~~~~~~-~~~~~~~~~~~~EgP~i~k~~G---------------~yyL~~s~~ 218 (314)
T 3cu9_A 166 --SG-IQLIQLDTETMKPAAQAELL-TIASRGEEPNAIEAPFIVCRNG---------------YYYLFVSFD 218 (314)
T ss_dssp --TC-EEEEECCTTTCSCCTTCCCE-EEECCSSSSCCEEEEEEEEETT---------------EEEEEEEES
T ss_pred --Cc-EEEEEECcccCcccCCCceE-EecccCCCCCccCccEEEEECC---------------EEEEEEEcC
Confidence 23 44555 344322 3211 1211112345899999999852 677777753
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.6e-17 Score=172.83 Aligned_cols=174 Identities=16% Similarity=0.175 Sum_probs=130.1
Q ss_pred CCccccccccceeeeecCC--Cc----ccCCccceEECCEEEEEEeeCC--CCCC-CCCcEEEEEEecCccCeeecceec
Q 011094 109 WTNAMFTWQRTSFHFQPEK--NW----MNDPNGPLFYKGWYHLFYQYNP--DSAV-WGNITWGHAVSADLIHWLYLPIAM 179 (494)
Q Consensus 109 ~~~~~~~w~Rp~~Hf~P~~--gw----mNDPNG~~y~~G~YHLFYQ~nP--~~~~-wg~~~WGHA~S~DLvhW~~~p~AL 179 (494)
.+..+..|++....|.|.. .| +-+|. +++++|+|||||+.+. .+.. .+.+.+++|+|+|++ |++++.+|
T Consensus 143 ~S~Dlv~W~~~g~~l~~~~~~~wd~~gv~aPs-Vi~~dGkYyL~Yt~~~~~~~~~~~~~i~va~A~S~DG~-W~~~~~pl 220 (408)
T 3p2n_A 143 TSEDGWTWKEEGPAVTRGEKGAYDDRSVFTVE-IMKWEDKYYLCYQTVKSPYNVRVKNQVGLAWADSPDGP-WTKSEEPI 220 (408)
T ss_dssp EESSSSEEEEEEEEECCCSTTSTTSSEEEEEE-EEEETTEEEEEEEEECSSCCTTCCCEEEEEEESSTTCC-CEECSSCS
T ss_pred EcCCCCeeeEeCceeCCCCCCCcccCceEeeE-EEEECCEEEEEEEeecCCCCCcCCCceEEEEEECCCCC-EEECCcce
Confidence 3566789999988888754 45 45776 7888999999999753 2221 345889999999999 99986444
Q ss_pred -cCC------------------CCcCCCcEEeeeEEEccCCeEEEEEeccCCC-------ccceEEEEEEcCCCCCCcce
Q 011094 180 -VPD------------------QWYDINGVWTGSATILPDGQIVMLYTGSTDK-------SVQVQNLAYPADPSDPLLLD 233 (494)
Q Consensus 180 -~Pd------------------~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~-------~~q~q~lA~S~D~~d~lL~~ 233 (494)
.|. ..||..+++.++++ ..+|+++|+|++...+ ..+.|++|+|+|+. ..
T Consensus 221 i~~~~~~~~~~e~d~~~~~~~~~~wd~~~v~~P~v~-~~~G~yyl~Ys~~~~g~~~~~~~~~~~igvA~Sdd~~----Gp 295 (408)
T 3p2n_A 221 LSPADNGVWKGEEQDRFAVIKKGDFDSHKVHDPCII-PYKGKFYLYYKGEQMGEAITFGGRQIRHGVAIADNPK----GP 295 (408)
T ss_dssp BCCCSCCEECSSSCCTTCEEECCSTTSSEEEEEEEE-EETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTT----CC
T ss_pred eCCCCCceEEEecCCcccccccceecCCCeEcceEE-EECCEEEEEEEcccCccccccCCCccEEEEEEECCCC----CC
Confidence 443 35677789888886 4799999999998531 24789999998852 47
Q ss_pred EEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcCcccc
Q 011094 234 WVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLH 301 (494)
Q Consensus 234 W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~ 301 (494)
|+|.++|||+... .||+| |.+.+|.|+|+. + +..|...+|+|+|+++|++.+.+..
T Consensus 296 w~k~~~nPVl~~~--------~dp~V-w~~~dG~y~mi~--~-~g~gh~~i~~S~Dg~~W~~~~~i~~ 351 (408)
T 3p2n_A 296 YVKSPYNPISNSG--------HEICV-WPYNGGIASLIT--T-DGPEKNTIQWAPDGINFEIKSVIPG 351 (408)
T ss_dssp CEECTTCCSCSSC--------SSCCE-EEETTEEEEEEC--S-SSTTCSEEEEESSSSCCEEEEECSC
T ss_pred cEECCCCCcccCC--------CCCee-EecCCCEEEEEE--E-CCCCcEEEEECCCCCEEEEEeeccc
Confidence 9999889998632 38999 876677777773 2 2234334589999999999988754
|
| >1yrz_A Xylan beta-1,4-xylosidase; structural genomics, nysgxrc target T1997, PSI, structure initiative; 2.00A {Bacillus halodurans} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=99.67 E-value=1.5e-15 Score=163.58 Aligned_cols=167 Identities=16% Similarity=0.200 Sum_probs=118.9
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcC------CCcEEeeeEEEccCC
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYD------INGVWTGSATILPDG 201 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D------~~Gv~SGSavv~~dG 201 (494)
|+++||+ +++++|+||||++..+. ...|.+++|+||+||+..+.+|.+...++ ..|+|.++++. .+|
T Consensus 12 g~~~DP~-i~~~~~~yY~~~s~~~~-----~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~wAP~i~~-~~g 84 (528)
T 1yrz_A 12 GFHPDPS-IVRVGDDYYIATSTFEW-----FPGVRIHHSRDLKHWRFVSSPLTRTSQLDMKGNMNSGGIWAPCLSY-HDG 84 (528)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTE-----ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ETT
T ss_pred CCCCCCe-EEEECCEEEEEEccCcc-----CCCeEEEECCCccCceECccccCCcccccccCCCCCCCEECCeEEE-ECC
Confidence 7899998 78899999999986432 23589999999999999999887765433 46899999975 799
Q ss_pred eEEEEEeccCC-C---ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEE---Eee
Q 011094 202 QIVMLYTGSTD-K---SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLT---IGS 274 (494)
Q Consensus 202 ~~~~~YTG~~~-~---~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~Mv---iGa 274 (494)
+++|+||+... . ..+.+++|+|+|.. ..|++ |+.. ....+||.+++ ++||++||+ +|+
T Consensus 85 ~~yl~yt~~~~~~g~~~~~~~~va~s~~p~----Gpw~~----p~~~------~~~~iDp~vf~-D~dG~~Yl~~~~~~~ 149 (528)
T 1yrz_A 85 TFYLIYTDVKQWHGAFKDAHNYLVTAQNIE----GPWSD----PIYL------NSSGFDPSLFH-DDDGRKWLVNMIWDY 149 (528)
T ss_dssp EEEEEEEEEEECSSSCCEEEEEEEEESSSS----SCCCC----CEEC------CCSCSCCEEEE-CTTSCEEEEEEEECC
T ss_pred EEEEEEecccCCCCCcccceEEEEEeCCCC----CCccc----cEEC------CCCcCCCceEE-CCCCCEEEEEeeccC
Confidence 99999997532 1 23458899998753 35764 4432 13579999954 578999999 665
Q ss_pred ecC--CeeEEEEEE-eCCCCCCEEcCcc--cccCCCCCceEeccEEEec
Q 011094 275 KIG--KTGISLVYQ-TTDFKTYELLDEY--LHAVPGTGMWECVDFYPVA 318 (494)
Q Consensus 275 ~~~--~~G~v~lY~-S~Dl~~W~~~~~l--l~~~~~~gmwECPdlf~l~ 318 (494)
+.. ..+.+.+++ +.|. ++..++. +....+..++|||.+|+.+
T Consensus 150 ~~~~~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~ 196 (528)
T 1yrz_A 150 RKGNHPFAGIILQEYSEAE--QKLVGPVKNIYKGTDIQLTEGPHLYKKD 196 (528)
T ss_dssp CTTSCSEEEEEEEEEETTT--TEEEEEEEEEECCCTTCCCEEEEEEEET
T ss_pred CCCCCCCCeEEEEEECCcc--CCCCCCCEEEEcCCCCCccCCCEEEEEC
Confidence 432 235566676 5564 3443332 2222233589999999985
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.4e-15 Score=156.88 Aligned_cols=122 Identities=19% Similarity=0.267 Sum_probs=98.4
Q ss_pred eeecc---eeccCCC------------CcCCCcEEeeeEEEccCCeEEEEEeccCCC------ccceEEEEEEcCCCCCC
Q 011094 172 WLYLP---IAMVPDQ------------WYDINGVWTGSATILPDGQIVMLYTGSTDK------SVQVQNLAYPADPSDPL 230 (494)
Q Consensus 172 W~~~p---~AL~Pd~------------~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~------~~q~q~lA~S~D~~d~l 230 (494)
|++.+ +.|.|.. .||.+|||+|||+. .||+++|||||+... +.+.|++|+|+|+
T Consensus 17 f~R~~~~nPIl~p~~~~~~~~~~~~~~~~D~~gv~sgsai~-~dG~y~lfYtg~~~~~~~~~~~~~~ig~A~S~Dg---- 91 (356)
T 3taw_A 17 FERPTGVNPVIKPLPTKFYCPMREDSVAWEESDTFNPAATI-YDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDG---- 91 (356)
T ss_dssp CBCCTTTCCSBCCCCCEEEETTTTEEEETTSSEEEEEEEEE-ETTEEEEEEEEECSSSCSTTSSCEEECCEEESSS----
T ss_pred eeeCCCCCCeEccCCccccCcccccCCccccCCeECcEEEE-ECCEEEEEEEEEcCCCccCCCceeEEEEEEeCCC----
Confidence 55543 4677765 68999999999976 799999999998643 4678999999985
Q ss_pred cceEEEcCCCceecCCCCCC-----CCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcCcccc
Q 011094 231 LLDWVKYPGNPVLVPPRHIG-----PKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLH 301 (494)
Q Consensus 231 L~~W~K~~~nPVi~~p~g~~-----~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~ 301 (494)
++|+|.+ +|||.+.+... ..++|||+| ++.++|+|+|+.++..+..+.+.+|+|+||++|++.+.++.
T Consensus 92 -i~w~~~~-~pvl~p~~~~~~~~~~~~~~~DP~v-~~~~dg~y~m~yt~~~~~~~~i~la~S~Dl~~W~~~g~i~~ 164 (356)
T 3taw_A 92 -IHFERDT-KPAFYPAKDNQAENECPGGTEDPRI-AMTEDGTYVLLYTQWNRKVPRLAVATSKDLKHWTKFGPAFE 164 (356)
T ss_dssp -SSCEECS-SCSBCCCSSTTHHHHTTTEEEEEEE-EECTTSCEEEEEEEECSSCEEEEEEEESSSSSCEEEEETTS
T ss_pred -ccceECC-cceecCCCccccccccCCceECCEE-EEECCCEEEEEEEEeCCCCceEEEEECCCCCCceEeeeEcC
Confidence 7999974 79997654422 368999999 44458899999887655678899999999999999988764
|
| >3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=3.8e-14 Score=151.32 Aligned_cols=176 Identities=16% Similarity=0.181 Sum_probs=123.9
Q ss_pred cccCCccceEECCEEEEEEeeCCC-----C-----CCCCCcEEEEEEecCccCeeecceeccCCC----------CcCCC
Q 011094 129 WMNDPNGPLFYKGWYHLFYQYNPD-----S-----AVWGNITWGHAVSADLIHWLYLPIAMVPDQ----------WYDIN 188 (494)
Q Consensus 129 wmNDPNG~~y~~G~YHLFYQ~nP~-----~-----~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~----------~~D~~ 188 (494)
+..||. +++++|+||||..+... + .......|.+++|+||+||+.++.++.+.. .| ..
T Consensus 21 ~~~DP~-i~~~~g~yYly~t~~~~~~~~~g~~~~~~~~~~~~i~i~~S~DLv~W~~~g~v~~~~~~~~~~g~~~~~w-~~ 98 (487)
T 3c7f_A 21 LGADPV-ALTYNGRVYIYMSSDDYEYNSNGTIKDNSFANLNRVFVISSADMVNWTDHGAIPVAGANGANGGRGIAKW-AG 98 (487)
T ss_dssp CCEEEE-EEEETTEEEEEEECCCCEECTTSCEECCCSTTCCSEEEEEESSSSSEEEEEEECCBCSTTGGGGTCSBTT-CS
T ss_pred cCCCCC-eEEECCEEEEEEcCCcccccccccccccccccccceEEEECCCCcCcEEccccccCCcccccccccccCc-cc
Confidence 678998 67789999999997542 1 111246789999999999999998877652 22 24
Q ss_pred cEEeeeEEEc-cC--CeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCC-CCCC-CCCCCCCeeEeec
Q 011094 189 GVWTGSATIL-PD--GQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP-RHIG-PKDFRDPTTAWAG 263 (494)
Q Consensus 189 Gv~SGSavv~-~d--G~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p-~g~~-~~~fRDP~V~w~~ 263 (494)
++|.++++.. .| |+++||||... +.+++|+|+|+. ..|++..+.|++... ++.. ....+||.+++ +
T Consensus 99 ~~WAP~v~~~~~~g~g~yylyyt~~~----~~i~va~s~~p~----Gpw~~~~g~pli~~~~~g~~~~~~~iDp~vf~-D 169 (487)
T 3c7f_A 99 ASWAPSIAVKKINGKDKFFLYFANSG----GGIGVLTADSPI----GPWTDPIGKPLVTPSTPGMSGVVWLFDPAVFV-D 169 (487)
T ss_dssp CCEEEEEEEEEETTEEEEEEEEESTT----BCEEEEEESSTT----CCCBCSSSSCSBCTTSTTCTTCSSBCCCEEEE-C
T ss_pred cCcchheEEEecCCCCeEEEEEEcCC----cEEEEEEeCCCC----CCcccCCCCeEeecCCCCccCCCCccCCceEE-c
Confidence 7999999763 24 69999999752 568999998863 459875456777532 2321 24579999955 5
Q ss_pred CCCeEEEEEeeecC-----------CeeEEEEE-EeCCCCCCEEcCcccccCCCCCceEeccEEEec
Q 011094 264 PDGKWRLTIGSKIG-----------KTGISLVY-QTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318 (494)
Q Consensus 264 ~dg~w~MviGa~~~-----------~~G~v~lY-~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~ 318 (494)
+||++||+.|+... ....+.+. -++|+.+|+.....+. ...+.|||.+++.+
T Consensus 170 ddG~~Yl~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~g~~~~i~---~p~~~Egp~i~k~~ 233 (487)
T 3c7f_A 170 DDGTGYLYAGGGVPGVSNPTQGQWANPKTARVIKLGPDMTSVVGSASTID---APFMFEDSGLHKYN 233 (487)
T ss_dssp TTSCEEEEEECCCSSTTSCCHHHHHCCCCEEEEEECTTSSSEEEEEEEEC---CTTEEEEEEEEEET
T ss_pred CCCCEEEEECCcccCccccccccccCCCceEEEEECCCeeeccCccEEec---CCceEecceEEEEC
Confidence 78999999987421 01122333 4789999986544332 22489999999985
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.56 E-value=1e-14 Score=150.98 Aligned_cols=125 Identities=16% Similarity=0.194 Sum_probs=100.3
Q ss_pred ccCeeecceeccCCC-------------CcCCCcEEeeeEEEccCCeEEEEEeccCCC------ccceEEEEEEcCCCCC
Q 011094 169 LIHWLYLPIAMVPDQ-------------WYDINGVWTGSATILPDGQIVMLYTGSTDK------SVQVQNLAYPADPSDP 229 (494)
Q Consensus 169 LvhW~~~p~AL~Pd~-------------~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~------~~q~q~lA~S~D~~d~ 229 (494)
++++....++|.|+. .||.++||+|+++. .||+++||||++... +.+.+++|+|+|+
T Consensus 19 f~r~~~~~Pil~p~~~~~~~~~~~~~~~~wD~~gvfnp~ai~-~dGky~LfY~~~~~~~~~~~~~~~~ig~A~S~DG--- 94 (364)
T 3qc2_A 19 FERPKNVNPVISPIENTKFYCPLTKDSIAWESNDTFNPAATL-YNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDG--- 94 (364)
T ss_dssp CBCCTTTCCSBCCCSSCCEEETTTTEEECTTSSEEEEEEEEE-ETTEEEEEEEEECSSSSSTTCSCEEEEEEEESSS---
T ss_pred ceeCCCCCCeEecCCcccccccccccccccccCceECceEEE-ECCEEEEEEEEECCCCcccCCCceEEEEEEeCCC---
Confidence 444544356788886 78999999999975 799999999998653 4578999999996
Q ss_pred CcceEEEcCCCceecCCCCCCC-----CCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcCcccc
Q 011094 230 LLLDWVKYPGNPVLVPPRHIGP-----KDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLH 301 (494)
Q Consensus 230 lL~~W~K~~~nPVi~~p~g~~~-----~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~ 301 (494)
++|++. .+|||.+....+. .++|||+| +..++|+|+|++++.....+.+.+++|+||++|++.+.++.
T Consensus 95 --i~w~~~-~~Pvl~P~~~~~~~~e~~~gv~DP~v-~~~edG~yym~Yta~~~~~~~i~lA~S~Dl~~W~k~g~i~~ 167 (364)
T 3qc2_A 95 --THFQRE-KTPVFYPDNDSQKELEWPGGCEDPRI-AVTDDGLYVMMYTQWNRHVPRLAVATSRNLKDWTKHGPAFA 167 (364)
T ss_dssp --SSCEEC-SSCSBCCCSSTTHHHHTTTEEEEEEE-EECTTSCEEEEEEEECSSCEEEEEEEESSSSSCEEEEETTS
T ss_pred --ceeeEc-CcCeEcCCCccccccccCCcEECCEE-EEeCCCEEEEEEEecCCCCeEEEEEEECCCCEEEEeeeccC
Confidence 899996 4799876544321 57899999 45468999999998765667889999999999999988764
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=1.4e-13 Score=142.81 Aligned_cols=174 Identities=16% Similarity=0.173 Sum_probs=121.1
Q ss_pred CccccccccceeeeecCC--Cc----ccCCccceEECCEEEEEEeeCCCCC-CCCCcEEEEEEecCc-cCeeecc-eecc
Q 011094 110 TNAMFTWQRTSFHFQPEK--NW----MNDPNGPLFYKGWYHLFYQYNPDSA-VWGNITWGHAVSADL-IHWLYLP-IAMV 180 (494)
Q Consensus 110 ~~~~~~w~Rp~~Hf~P~~--gw----mNDPNG~~y~~G~YHLFYQ~nP~~~-~wg~~~WGHA~S~DL-vhW~~~p-~AL~ 180 (494)
+..+..|++...-+.|.. .| +-.|. +++++|+|+|||..+.... .......|+|+|+|+ .+|+..+ +.|.
T Consensus 99 S~DLv~W~~~g~~l~~~~~~~~d~~gvwaPs-vi~~dGkyyL~Yt~~~~~~~~~~~~~igvA~Sdd~~Gpw~~~~~Pvi~ 177 (374)
T 3r4z_A 99 SKDKITWKEIGPAIQRGAAGAYDDRAVFTPE-VLRHNGTYYLVYQTVKAPYLNRSLEHIAIAYSDSPFGPWTKSDAPILS 177 (374)
T ss_dssp ESSSSEEEEEEEEECCCCTTSTTSSEEEEEE-EEEETTEEEEEEEEECSSCCTTCCBEEEEEEESSTTCCCEECSSCSBC
T ss_pred CCCCcCcEeCcccCCCCCCCCccCCCEECCE-EEEECCEEEEEEEeccCCCCCCCcceEEEEEECCCCCCeEECCCCEeC
Confidence 445667887776666643 33 33465 6778999999998764322 123468999999997 7899875 3444
Q ss_pred CCC------------------CcCCCcEEeeeEEEccCCeEEEEEeccCCCc-------cceEEEEEEcCCCCCCcceEE
Q 011094 181 PDQ------------------WYDINGVWTGSATILPDGQIVMLYTGSTDKS-------VQVQNLAYPADPSDPLLLDWV 235 (494)
Q Consensus 181 Pd~------------------~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~-------~q~q~lA~S~D~~d~lL~~W~ 235 (494)
+.. .|+..+++.++++ ..+|+++|+|++...+. .+.|++|+|++.. ..|+
T Consensus 178 ~~~~~~w~~ddd~~~~~~~~~~~d~~~~~~P~v~-~~~g~yyl~Y~~~~~~~~~~~~~~~~~igvA~sds~~----Gpw~ 252 (374)
T 3r4z_A 178 PENDGVWDTDEDNRFLVKEKGSFDSHKVHDPCLM-FFNNRFYLYYKGETMGESMNMGGREIKHGVAIADSPL----GPYT 252 (374)
T ss_dssp CCCCSEECSSSSCTTCEEECCSTTSSEEEEEEEE-EETTEEEEEEEEECTTCCEETTEECEEEEEEEESSTT----CCCE
T ss_pred CCcCCceeecCCceEEEecCCccccCccccceEE-EECCEEEEEEEecCCCCccccCCCcceEEEEEECCCC----CCCE
Confidence 421 2355568888876 47999999999985321 3579999998752 4699
Q ss_pred EcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcCcccc
Q 011094 236 KYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLH 301 (494)
Q Consensus 236 K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~ 301 (494)
|.+.+||+.. .+||+| |.. ++.|+++++....+.+ .++.|+|+++|++.+.+..
T Consensus 253 ~~~~~Pi~~~--------~~dp~V-~~~-~~g~~~mv~~~g~~~~--~l~~S~Dg~~W~~~~~i~~ 306 (374)
T 3r4z_A 253 KSEYNPITNS--------GHEVAV-WPY-KGGMATMLTTDGPEKN--TCQWAEDGINFDIMSHIKG 306 (374)
T ss_dssp ECTTCCCCSS--------CSSCCE-EEE-TTEEEEEECSSSTTCS--EEEEETTSSSCEEEEECSC
T ss_pred ECCCCCEeCC--------CCCCce-EEe-CCEEEEEEEecCCCce--EEEECCCcCCeEEcceecc
Confidence 9988999852 259999 764 4556444453333334 4566999999999988864
|
| >2exh_A Beta-D-xylosidase; glykosidase, hydrolsase, family43, hydrolase; HET: MES; 1.88A {Geobacillus stearothermophilus} SCOP: b.29.1.23 b.67.2.1 PDB: 2exi_A* 2exj_A* 2exk_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=1.3e-13 Score=148.65 Aligned_cols=167 Identities=16% Similarity=0.111 Sum_probs=117.5
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCc------CCCcEEeeeEEEccCC
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWY------DINGVWTGSATILPDG 201 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~------D~~Gv~SGSavv~~dG 201 (494)
|++.||+ +++++|+||||++.... ...+.+++|+||+||+..+.+|.+...+ +..++|.++++. .||
T Consensus 11 g~~~DP~-i~~~~~~yY~~~s~~~~-----~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~g 83 (535)
T 2exh_A 11 GFHPDPS-ICRVGDDYYIAVSTFEW-----FPGVRIYHSKDLKNWRLVARPLNRLSQLNMIGNPDSGGVWAPHLSY-SDG 83 (535)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTE-----ESBCEEEEESSSSSCEEEECCBCSTTTCCCTTCCTTCBBCSCEEEE-ETT
T ss_pred CCCCCCE-EEEECCEEEEEECCCCC-----CCCeEEEECCCCCCcEECccccCCcccccccCCCCCCCEECCeEEE-ECC
Confidence 7899998 78889999999885421 2358999999999999999888765422 357899999975 799
Q ss_pred eEEEEEeccCCC----ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecC
Q 011094 202 QIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG 277 (494)
Q Consensus 202 ~~~~~YTG~~~~----~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~ 277 (494)
+++|+||+.... ..+.+++|+|+|.. ..|++ |+... ...+||.+++ ++||++||+.+...+
T Consensus 84 ~~ylyyt~~~~~~g~~~~~~~~va~s~~~~----Gpw~~----p~~~~------~~~iDp~vf~-DddG~~Yl~~~~~~~ 148 (535)
T 2exh_A 84 KFWLIYTDVKVVEGQWKDGHNYLVTCDTID----GAWSD----PIYLN------SSGFDPSLFH-DEDGRKYLVNMYWDH 148 (535)
T ss_dssp EEEEEEEEECCCSSSCCCEEEEEEEESSTT----SCCCC----CEECC------CSCSCCEEEE-CTTSCEEEEEEEECC
T ss_pred EEEEEEEeccCCCCCccccceEEEEeCCCC----CCccc----cEecC------CCcCCCceEE-CCCCCEEEEEEecCC
Confidence 999999976431 23567899998753 45764 44321 2468999954 578999999885321
Q ss_pred -----CeeEEEEEE-eCCCCCCEEcCcc--cccCCCCCceEeccEEEec
Q 011094 278 -----KTGISLVYQ-TTDFKTYELLDEY--LHAVPGTGMWECVDFYPVA 318 (494)
Q Consensus 278 -----~~G~v~lY~-S~Dl~~W~~~~~l--l~~~~~~gmwECPdlf~l~ 318 (494)
..+.+.+++ +.|+ |+..++. +.......++|||.+|+.+
T Consensus 149 ~~~~~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~ 195 (535)
T 2exh_A 149 RVDHHPFYGIVLQEYSVEQ--KKLVGEPKIIFKGTDLRITEGPHLYKIN 195 (535)
T ss_dssp CTTSCSEEEEEEEEEETTT--TEEEEEEEEEECCCTTCCCEEEEEEEET
T ss_pred ccCCCCCCcEEEEEECCcc--CCCCCCcEEEEcCCCCCccccceEEEEC
Confidence 123455665 5564 4554432 1122233589999999985
|
| >1yif_A Beta-1,4-xylosidase; glycosidase, xylan, structural genomics, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=99.54 E-value=1.5e-13 Score=148.17 Aligned_cols=168 Identities=17% Similarity=0.150 Sum_probs=116.8
Q ss_pred CCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCc------CCCcEEeeeEEEccC
Q 011094 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWY------DINGVWTGSATILPD 200 (494)
Q Consensus 127 ~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~------D~~Gv~SGSavv~~d 200 (494)
.|++.||+ +++++|.||||++..+. ...|.+++|+||+||+..+.+|.+...+ +..++|.++++. .|
T Consensus 9 ~g~~~DP~-ii~~~~~yY~~~s~~~~-----~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~ 81 (533)
T 1yif_A 9 KGFNPDPS-ICRAGEDYYIAVSTFEW-----FPGVQIHHSKDLVNWHLVAHPLQRVSQLDMKGNPNSGGVWAPCLSY-SD 81 (533)
T ss_dssp CSSCCSCE-EEEETTEEEEEECCBTE-----ESBCEEEEESSSSSEEEEECSBCSTTTCCCTTCCTTCBBCSCEEEE-ET
T ss_pred CCCCCCCe-EEEECCEEEEEEecCCC-----CCCeEEEEeCCCCCCeECCccccCcccccccCCCCCCCEECceEEE-EC
Confidence 47889998 68889999999886432 1348999999999999999888765432 247899999975 79
Q ss_pred CeEEEEEeccCC-C---ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec
Q 011094 201 GQIVMLYTGSTD-K---SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI 276 (494)
Q Consensus 201 G~~~~~YTG~~~-~---~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~ 276 (494)
|+++|+||+... + ..+.+++|+|+|.. ..|++ |+... ...+||.+++ ++||++||+.+...
T Consensus 82 g~~yl~yt~~~~~~g~~~~~~~~va~s~~p~----Gpw~~----p~~~~------~~~iDp~~f~-D~dG~~Yl~~~~~~ 146 (533)
T 1yif_A 82 GKFWLIYTDVKVVDGAWKDCHNYLVTCETIN----GDWSE----PIKLN------SSGFDASLFH-DTDGKKYLLNMLWD 146 (533)
T ss_dssp TEEEEEEEEECCCSSSCCCEEEEEEEESSTT----SCCCC----CEECC------CSCSCCEEEE-CTTSCEEEEEEEEC
T ss_pred CEEEEEEEeccCCCCCcccccEEEEEeCCCC----CCccc----cEEcC------CCcCCCceEE-CCCCCEEEEEEecc
Confidence 999999997543 1 13568899998753 46864 44332 2468999955 57899999988431
Q ss_pred C-----CeeEEEEEE-eCCCCCCEEcCcc--cccCCCCCceEeccEEEec
Q 011094 277 G-----KTGISLVYQ-TTDFKTYELLDEY--LHAVPGTGMWECVDFYPVA 318 (494)
Q Consensus 277 ~-----~~G~v~lY~-S~Dl~~W~~~~~l--l~~~~~~gmwECPdlf~l~ 318 (494)
. ..+.+.+++ +.|+. +..++. +....+..++|||.+|+.+
T Consensus 147 ~~~g~~~~~~i~~~~l~~d~~--~~~g~~~~i~~~~~~~~~EgP~i~k~~ 194 (533)
T 1yif_A 147 HRIDRHSFGGIVIQEYSDKEQ--KLIGKPKVIFEGTDRKLTEAPHLYHIG 194 (533)
T ss_dssp CCTTSCSEEEEEEEEEETTTT--EECSCCEEEECCCTTCCCEEEEEEEET
T ss_pred cccCCCCCCCEEEEEECCccC--CCCCCcEEEEcCCCCCccccceEEEEC
Confidence 1 123455555 56653 333321 1122233589999999985
|
| >3nqh_A Glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.11A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.1e-13 Score=144.16 Aligned_cols=165 Identities=18% Similarity=0.156 Sum_probs=120.0
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC--cCC-CcEEeeeEEEc-cCCeEEEEE
Q 011094 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW--YDI-NGVWTGSATIL-PDGQIVMLY 207 (494)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~--~D~-~Gv~SGSavv~-~dG~~~~~Y 207 (494)
||. +++++|+||||.++.+.... ....|.+++|+||+||+.++.+|.+... +.. .++|..+++.. .||+++|+|
T Consensus 26 DPs-Ii~~~g~YYly~T~~~~~~~-~~~gi~v~sS~DLvnW~~~G~aL~~~~~~~~~~~~~~WAP~V~y~~~dGkYYLyy 103 (441)
T 3nqh_A 26 GAC-IVEENGRYYLFGEYKSDKSN-AFPGFSCYSSDDLVNWKFERVVLPMQSSGILGPDRVGERVKVMKCPSTGEYVMYM 103 (441)
T ss_dssp EEE-EEEETTEEEEEEECCCSSCS-SCCCEEEEEESSSSSCEEEEEEECCCSSSTTSTTEEEEEEEEEECTTTCCEEEEE
T ss_pred CCE-EEEECCEEEEEEEcCCccCC-CCCCeeEEECCCCCCcEECceeeccCCccccCCCCccCCceeEEEccCCEEEEEE
Confidence 885 89999999999998765432 3467999999999999999999977542 322 35899998753 599999999
Q ss_pred eccCCC-ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEE
Q 011094 208 TGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQ 286 (494)
Q Consensus 208 TG~~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~ 286 (494)
|+.... ..+.+++|+|++.. ..|+.. .|++.... ....+||.++ .++||++||+.|+ +.+ ++
T Consensus 104 t~~~~~~~~~~igVAtSdsP~----GPwt~~--gpl~~~g~---~~~~IDPsvF-~DdDGk~YL~~g~-----~~I--~e 166 (441)
T 3nqh_A 104 HADDMNYKDPHIGYATCSTIA----GEYKLH--GPLLYEGK---PIRRWDMGTY-QDTDGTGYLLLHG-----GIV--YR 166 (441)
T ss_dssp EEEETTSCSCEEEEEEESSTT----SCCEEE--EECEETTE---ECCCCSEEEE-ECTTSCEEEEEGG-----GEE--EE
T ss_pred EeCCCCCCcceEEEEEeCCCC----CCceEc--ceeecCCC---cccccCceEE-EeCCCCEEEEeCC-----CcE--EE
Confidence 987532 34678999998753 568863 57764311 1256899995 4579999999985 222 34
Q ss_pred -eCCCCCCEEcCcccccCCCCCceEeccEEEec
Q 011094 287 -TTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318 (494)
Q Consensus 287 -S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~ 318 (494)
++|+.++.-....+. .....|||.+|+.+
T Consensus 167 Ls~D~~~~~g~~~~i~---~g~~~EgP~i~K~~ 196 (441)
T 3nqh_A 167 LSKDYRTAEEKVVSGV---GGSHGESPAMFKKD 196 (441)
T ss_dssp ECTTSSSEEEEEESCS---TTCCCEEEEEEEET
T ss_pred eCCccccccCceEEeC---CCCceECcEEEEEC
Confidence 789988764322221 22468999999985
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A | Back alignment and structure |
|---|
Probab=99.51 E-value=3.1e-13 Score=141.70 Aligned_cols=175 Identities=19% Similarity=0.234 Sum_probs=122.6
Q ss_pred CccccccccceeeeecC--CCc----ccCCccceEECCEEEEEEeeCCCCC-CCCCcEEEEEEecC-ccCeeecc-eecc
Q 011094 110 TNAMFTWQRTSFHFQPE--KNW----MNDPNGPLFYKGWYHLFYQYNPDSA-VWGNITWGHAVSAD-LIHWLYLP-IAMV 180 (494)
Q Consensus 110 ~~~~~~w~Rp~~Hf~P~--~gw----mNDPNG~~y~~G~YHLFYQ~nP~~~-~wg~~~WGHA~S~D-LvhW~~~p-~AL~ 180 (494)
+..+..|++..-=+.|. ..| +-+|. +++++|+|+|||..+.... ..+....|.|+|+| .-.|+..+ ++|.
T Consensus 139 S~Dlv~W~~~g~~L~~~~~~~wd~~gv~aP~-Vi~~~Gkyym~Yt~~~~~~~~~~~~~IgvA~Sdsp~Gpwt~~~~Pvl~ 217 (404)
T 4ak5_A 139 SKDGLTWKEQGIAVKRGEKGAYDDRSVFTPE-VMEWKGKYYLCYQAVKSPYTVRVKNTIGMACADSPEGLWTKTDKPVLE 217 (404)
T ss_dssp ESSSSEEEEEEEEECCCSTTSTTSSEEEEEE-EEEETTEEEEEEEEECSCCCTTCCCEEEEEEESSTTCCCEECSSCSBC
T ss_pred CCCCCCceeCceEeecCCCCccccCCEEeeE-EEEECCEEEEEEEeccCCCCCCCcceEEEEEEeCCCCCceECCCceec
Confidence 44566787776655553 234 44675 6788999999998654321 12346789999986 34899876 3444
Q ss_pred CCC------------------CcCCCcEEeeeEEEccCCeEEEEEeccCCCc-------cceEEEEEEcCCCCCCcceEE
Q 011094 181 PDQ------------------WYDINGVWTGSATILPDGQIVMLYTGSTDKS-------VQVQNLAYPADPSDPLLLDWV 235 (494)
Q Consensus 181 Pd~------------------~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~-------~q~q~lA~S~D~~d~lL~~W~ 235 (494)
|.. .||..+++.++++ ..+|+++|||+|...+. .+.|++|+|+|+ +..|+
T Consensus 218 ~~~~~~W~~ddd~~~~~~~~~~wD~~~~~~P~v~-~~~g~yyl~Ysg~~~~~~~~~~~~~~~igvA~Sdd~----~Gpw~ 292 (404)
T 4ak5_A 218 PSDTGEWEGDEDNRFKVVSKGDFDSHKVHDPCII-PYNGKFYMYYKGERMGEEITWGGREIKHGVAIAENP----MGPYV 292 (404)
T ss_dssp CCSCCEECSSSSCTTCEEECCSTTSSEEEEEEEE-EETTEEEEEEEEECTTCCEETTEECCEEEEEEESST----TCCCE
T ss_pred CCCCcceeeccCceeeeccCCcccCCcEECCEEE-EECCEEEEEEECCCCCCccccCCCcceEEEEEECCC----CCCcE
Confidence 432 3466788999986 47999999999986321 468999999885 25799
Q ss_pred EcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcCccccc
Q 011094 236 KYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHA 302 (494)
Q Consensus 236 K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~~ 302 (494)
|.+.|||+.. + .+++| |.+.+|.|+|+... ..+.| .++.|+|+++|++.+.+.+.
T Consensus 293 k~~~nPv~~~--~------~e~~V-w~~~dg~~~ll~~~-g~~~g--~l~~S~Dg~~W~~~~~l~~~ 347 (404)
T 4ak5_A 293 KSEYNPISNS--G------HEVCV-WPYKGGIASLITTD-GPEKN--TLQWSPDGINFEIMSVVKGA 347 (404)
T ss_dssp ECTTCCSCSS--C------SSCCE-EEETTEEEEEECSS-STTCS--EEEEESSSSCCEEEEECSCC
T ss_pred ECCCCceecC--C------CcceE-EEeCCcEEEEEEec-CCCce--EEEECCCCCeEEEeeeeccC
Confidence 9988999852 1 25678 87655555666432 23445 46679999999999988754
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 | Back alignment and structure |
|---|
Probab=99.51 E-value=3e-14 Score=145.71 Aligned_cols=122 Identities=14% Similarity=0.144 Sum_probs=101.4
Q ss_pred cCccCeeecceeccCCC-CcCCCcEEeeeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecC
Q 011094 167 ADLIHWLYLPIAMVPDQ-WYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVP 245 (494)
Q Consensus 167 ~DLvhW~~~p~AL~Pd~-~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~ 245 (494)
..+++|+..| +|.|+. .| ..|||+++++. .||+++|||++....+.+.|++|+|+|+ ++|++.+ +|||.+
T Consensus 34 ~~~~r~~~~P-iL~p~~~~~-~~gv~n~~~i~-~~g~~~lfY~~~~~~~~~~~~~A~S~Dg-----i~w~~~~-~pvl~p 104 (338)
T 1vkd_A 34 GPVWRYSKNP-IIGRNPVPK-GARVFNSAVVP-YNGEFVGVFRIDHKNTRPFLHFGRSKDG-----INWEIEP-EEIQWV 104 (338)
T ss_dssp SSEEECTTCC-SBCBSCSTT-EEEEEEEEEEE-ETTEEEEEEEEEETTSCEEEEEEEESSS-----SSCEECS-SCCCEE
T ss_pred CceEECCCCc-eECCCCCcc-cCeEEccEEEE-ECCEEEEEEEEECCCCcEEEEEEEeCCC-----CccEECC-CCEEeC
Confidence 3588999888 788985 77 79999999976 6999999999987666789999999986 7999974 788876
Q ss_pred C--CCCCCCCCC-CCeeEeecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcCccc
Q 011094 246 P--RHIGPKDFR-DPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL 300 (494)
Q Consensus 246 p--~g~~~~~fR-DP~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll 300 (494)
. ...+..++| ||+| ++ .+|+|+|++++ ....+.+.+++|+|+++|++.+.+.
T Consensus 105 ~~~~~~~~~g~~yDP~v-~~-~~d~yym~yt~-~~~~~~i~la~S~Dl~~W~~~~~i~ 159 (338)
T 1vkd_A 105 DVNGEPFQPSYAYDPRV-VK-IEDTYYITFCT-DDHGPTIGVGMTKDFKTFVRLPNAY 159 (338)
T ss_dssp CTTSCBCCCSSEEEEEE-EE-ETTEEEEEEEE-ESSSEEEEEEEESSSSSEEEECCSS
T ss_pred CCCCccccCCEEeCcEE-EE-ECCEEEEEEEE-cCCcceEEEEEECCCCeEEECCccC
Confidence 4 334567899 9999 44 46899999998 5566789999999999999988765
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=9.9e-12 Score=134.10 Aligned_cols=177 Identities=16% Similarity=0.128 Sum_probs=119.2
Q ss_pred ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC--CcCCCcEEeeeEEEc-cCCeEEEE
Q 011094 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ--WYDINGVWTGSATIL-PDGQIVML 206 (494)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~--~~D~~Gv~SGSavv~-~dG~~~~~ 206 (494)
.-||. +++++|+||||....... .....+..++|+||+||+..+.+|.+.. .++..++|.++++.. .+|+++||
T Consensus 58 a~DP~-Ii~~~g~YY~~~T~~~~~--~~~~gi~v~~S~DLv~W~~~g~~l~~~~~~~~~~~~~WAP~v~~~~~~Gkyymy 134 (526)
T 3vsf_A 58 AHGGG-MLKHGDYYYWYGEYRDDS--NLFLGVSCYRSKDLVNWEYRGEVLSRNSAPELNHCNIERPKVMYNASTGEFVMW 134 (526)
T ss_dssp CEEEE-EEEETTEEEEEEEEECTT--SSEEEEEEEEESSSSSCEEEEEEEETTSSGGGSSCEEEEEEEEECTTTCCEEEE
T ss_pred ccCCe-EEEECCEEEEEEecCCCC--CCcCcEEEEECCCCCCcCCCCccCCCCCCcCcccCceECCEEEEECCCCEEEEE
Confidence 45996 888999999999875322 2236789999999999999999887654 355667999999764 38999999
Q ss_pred EeccC--CCccceEEEEEEcCCCCCCcceEEEcCC-CceecC---CCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCee
Q 011094 207 YTGST--DKSVQVQNLAYPADPSDPLLLDWVKYPG-NPVLVP---PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTG 280 (494)
Q Consensus 207 YTG~~--~~~~q~q~lA~S~D~~d~lL~~W~K~~~-nPVi~~---p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G 280 (494)
|+... ....+.+++|+|++.. ..|+.... .|+... +.+......+||.+| .++||++||++++..+ .+
T Consensus 135 ~~~~~~~~~~~~~igvats~~p~----Gpw~~~g~~~p~~~~g~~~~~~~~~~~iDp~vf-~D~dG~~Yl~~~~~~~-~~ 208 (526)
T 3vsf_A 135 MHWENGINYGQARAAVAYSKTPD----GKFTYIRSFRPMQDTGVMDHGLPGYMSRDCNVF-VDTDGKGYFISAANEN-MD 208 (526)
T ss_dssp EEEECSSCSCCCEEEEEEESSSS----SCCEEEEEECSSCTTCCEETTEESCCCCSEEEE-ECTTSCEEEEEEETTT-TE
T ss_pred EEeeCCCCCCcceEEEEEcCCCC----CCCEeccccccccccccccCCCCCcccccccEE-ECCCCCEEEEEEecCC-Cc
Confidence 99642 1234788999998863 46775421 233211 001111456999995 4579999999987532 24
Q ss_pred EEEEEEeCCCCCCEEcCcccccCCCCCceEeccEEEec
Q 011094 281 ISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318 (494)
Q Consensus 281 ~v~lY~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~ 318 (494)
+.+.--++|+..+.-....+. . ....|+|.+|+.+
T Consensus 209 i~i~~l~~d~~~~~~~~~~~~--~-g~~~EgP~i~k~~ 243 (526)
T 3vsf_A 209 LHLYELTPDYKNIASLKAKLF--V-GQQREAPCLIKRN 243 (526)
T ss_dssp EEEEEECTTSSSEEEEEEEES--T-TSCCEEEEEEESS
T ss_pred eEEEEcCCCcccccCceEEeC--C-CCCcCCeEEEEEC
Confidence 333334677776654222111 1 2467999999974
|
| >3c2u_A Xylosidase/arabinosidase; tetramer, glycoside hydrolase, GH43, alpha-L- arabinofuranosidase; HET: B3P; 1.30A {Selenomonas ruminantium} PDB: 1y7b_A* 1yi7_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.2e-10 Score=125.73 Aligned_cols=167 Identities=18% Similarity=0.193 Sum_probs=112.8
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC------cCCCcEEeeeEEEccCC
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW------YDINGVWTGSATILPDG 201 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~------~D~~Gv~SGSavv~~dG 201 (494)
|+..||. ++.++|.|+||..... | ...+..++|+||+||+..+.+|..... .+..++|.++++. .+|
T Consensus 10 ~~~~DP~-i~~~~~~yY~~~s~~~----~-~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~g 82 (538)
T 3c2u_A 10 GFNPDPS-IVRAGDDYYIATSTFE----W-FPGVQIHHSKDLVHWHLVAHPLSTTEFLDMKGNPDSGGIWAPDLSY-ADG 82 (538)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBT----E-ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ETT
T ss_pred CCCCCCE-EEEECCEEEEEEccCC----C-CCCeEEEECCCCCCcEECccccCCcccccccCCCCCCCEECCeEEE-ECC
Confidence 7889998 8888999999875321 1 134788999999999999988865431 1346899999975 799
Q ss_pred eEEEEEeccCC-C---ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecC
Q 011094 202 QIVMLYTGSTD-K---SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG 277 (494)
Q Consensus 202 ~~~~~YTG~~~-~---~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~ 277 (494)
+++|+||.... . ..+.+++|+|+|.. ..|++ |+... ...+||.+++ ++||++||+.+....
T Consensus 83 ~~yly~t~~~~~~g~~~~~~~~va~s~~p~----Gpw~~----p~~~~------~~~iDp~~f~-DddG~~Yl~~~~~~~ 147 (538)
T 3c2u_A 83 KFWLIYTDVKVVDGMWKDCHNYLTTAEDIK----GPWSK----PILLN------GAGFDASLFH-DPSGKKYLVNMYWDQ 147 (538)
T ss_dssp EEEEEEEEECCCSSSCCCEEEEEEEESSTT----CCCCC----CEEEE------CSCSCCEEEE-CTTSCEEEEEEEECC
T ss_pred EEEEEEEeccCCCCCcccccEEEEEECCCC----CCccc----cEecC------CCcCCCeeEE-CCCCCEEEEEEecCC
Confidence 99999997542 1 13567899998753 35764 33321 1358999965 578999999874321
Q ss_pred -----CeeEEEEEE-eCCCCCCEEcCcc--cccCCCCCceEeccEEEec
Q 011094 278 -----KTGISLVYQ-TTDFKTYELLDEY--LHAVPGTGMWECVDFYPVA 318 (494)
Q Consensus 278 -----~~G~v~lY~-S~Dl~~W~~~~~l--l~~~~~~gmwECPdlf~l~ 318 (494)
..+.+.+.+ +.|. ++..++. +....+....|+|.+|+.+
T Consensus 148 ~~~~~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~ 194 (538)
T 3c2u_A 148 RVYHHNFYGIALQEYSVAE--EKLIGKPEIIYKGTDIAYTEGPHLYYIN 194 (538)
T ss_dssp CTTSCSEEEEEEEEEETTT--TEECSCCEEEECCCTTCCCEEEEEEEET
T ss_pred ccCCCCCCCEEEEEECCcc--CCCCCCCEEEecCCCCCccccceEEEEC
Confidence 123444555 4554 4554432 1121223478999999985
|
| >2x8s_A Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; 1.50A {Bacillus subtilis} PDB: 2x8f_A 2x8t_A 3lv4_A | Back alignment and structure |
|---|
Probab=99.07 E-value=1.8e-09 Score=115.23 Aligned_cols=128 Identities=21% Similarity=0.315 Sum_probs=89.7
Q ss_pred ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC--------------Cc-CCCcEEeee
Q 011094 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ--------------WY-DINGVWTGS 194 (494)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~--------------~~-D~~Gv~SGS 194 (494)
.-||. +++++|+|+||..+ ...++|+||+||+..+.+|.+.. .| ...++|.++
T Consensus 36 ~~DPs-ii~~~g~YYl~~T~-----------~~i~~S~DLvnW~~~g~~l~~~~~~~~~~~~~l~~~~~w~~~~~~WAP~ 103 (470)
T 2x8s_A 36 VHDPS-IIETNGTFYVFGSH-----------LASAKSNDLMQWQQLTTSVSNDNPLIPNVYEELKETFEWAQSDTLWAAD 103 (470)
T ss_dssp CSSCE-EEEETTEEEEECST-----------TCEEEESSSSBCEEEECSCSTTCTTSTTHHHHTHHHHHHHTCSSCCCCE
T ss_pred CCCCE-EEEECCEEEEEECc-----------CceEECCCcccceeccccccccccccccccccccccccccCCCceECCe
Confidence 56997 78889999998542 13589999999999987765421 11 236899999
Q ss_pred EEEccCCeEEEEEeccCCC-ccceEEEEEEcCCCCCCcceEEEcCCCceecCC-----CC--C---CCCCCCCCeeEeec
Q 011094 195 ATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP-----RH--I---GPKDFRDPTTAWAG 263 (494)
Q Consensus 195 avv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p-----~g--~---~~~~fRDP~V~w~~ 263 (494)
++..+||+++|||+..... ..+.+++|+|+|+. ..|+.. +.++.... .+ + .....+||.+++ +
T Consensus 104 vi~~~dGkyylyys~~~~~~~~~~IgvatSddp~----GPw~~~-g~~l~~~~~~~~~dg~~~~~~~~~~~IDp~vf~-D 177 (470)
T 2x8s_A 104 VTQLADGKYYMYYNACRGDSPRSAMGVAVADNIE----GPYKNK-GIFLKSGMEGTSSDGTPYDATKHPNVVAPHTFF-D 177 (470)
T ss_dssp EEECTTSCEEEEEEEECSSSCCEEEEEEEESSTT----CCCEEE-EEEEEECCSSBCTTSSBCCTTTSCCSCCCEEEE-C
T ss_pred EEEecCCEEEEEEEeccCCCCccEEEEEEeCCCC----CCceeC-CeeeccCcccccccccccccccCCCCCCCCEEE-c
Confidence 8765689999999986432 34568899998763 469875 23443310 01 1 123568999965 5
Q ss_pred CCCeEEEEEeee
Q 011094 264 PDGKWRLTIGSK 275 (494)
Q Consensus 264 ~dg~w~MviGa~ 275 (494)
+||++||+.|+.
T Consensus 178 dDG~~Yl~~g~~ 189 (470)
T 2x8s_A 178 KDGKLWMVYGSY 189 (470)
T ss_dssp TTSCEEEEECBS
T ss_pred CCCCEEEEeeec
Confidence 789999999864
|
| >3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=5.6e-08 Score=103.38 Aligned_cols=167 Identities=13% Similarity=0.105 Sum_probs=106.3
Q ss_pred cCCccceE-ECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceec--cCCC-CcCCCcEEeeeEEEccCCeEEEE
Q 011094 131 NDPNGPLF-YKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM--VPDQ-WYDINGVWTGSATILPDGQIVML 206 (494)
Q Consensus 131 NDPNG~~y-~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL--~Pd~-~~D~~Gv~SGSavv~~dG~~~~~ 206 (494)
-||. ++. .+|+|+||+.... ...+..+.|+||+||+..+.++ .+.. .....++|...++. .||+++|+
T Consensus 20 ~DP~-iir~~dg~YY~~~T~~~------~~~i~i~~S~DLv~W~~~~~~~~w~~~~~~~~~~~~WAP~v~~-~~Gkyyly 91 (468)
T 3akh_A 20 ADPH-IFKHTDGYYYFTATVPE------YDRIVLRRATTLQGLATAPETTIWTKHASGVMGAHIWAPEIHF-IDGKWYVY 91 (468)
T ss_dssp EEEE-EEECTTSCEEEEEECTT------CCEEEEEEESSTGGGGGCCCEEEEECCSSSTTCEEEEEEEEEE-ETTEEEEE
T ss_pred CCCE-EEEecCCEEEEEEEeCC------CCCEEEEECCCccccccCCCcceecCCCCCCCCCCEecceEEE-ECCEEEEE
Confidence 7997 677 5899999987521 2468899999999999887433 2211 22346899999875 69999999
Q ss_pred EeccCCCc--cceEEEEE--EcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec---CCe
Q 011094 207 YTGSTDKS--VQVQNLAY--PADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI---GKT 279 (494)
Q Consensus 207 YTG~~~~~--~q~q~lA~--S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~---~~~ 279 (494)
|+...... ...+++|+ ++|. +-..|+.. ..++.+. + ....||.+++ ++|++||+.|+.. +..
T Consensus 92 ys~~~~~~~~~~~i~va~~~s~dp---~~Gpw~~~--g~~~~~~-~---~~~IDp~vf~--ddG~~Yl~~g~~~~~~~~~ 160 (468)
T 3akh_A 92 FAAGSTSDVWAIRMYVLESGAANP---LTGSWTEK--GQIATPV-S---SFSLDATTFV--VNGVRHLAWAQRNPAEDNN 160 (468)
T ss_dssp EEEECSSCTTCCEEEEEEECCSCT---TTSCCEEE--EECCCSS-C---SCEEEEEEEE--ETTEEEEEEEECCTTSSSS
T ss_pred EEeECCCCCCceeEEEEEccCCCC---CCCCCccc--ceeecCC-C---CCcCcCeEEE--ECCEEEEEEEccCCCCCCC
Confidence 99865321 34566776 4443 22578874 2233221 1 2357999954 6899999998642 122
Q ss_pred eEEEEEEeCCCCCCEEcCcc--cccC------CCCCceEeccEEEec
Q 011094 280 GISLVYQTTDFKTYELLDEY--LHAV------PGTGMWECVDFYPVA 318 (494)
Q Consensus 280 G~v~lY~S~Dl~~W~~~~~l--l~~~------~~~gmwECPdlf~l~ 318 (494)
+.+.+.+.+|. |+..+.. +... .+....|-|-+|+.+
T Consensus 161 ~~i~i~~l~~~--~~~~g~~~~i~~~~~~we~~g~~~~EGP~i~k~~ 205 (468)
T 3akh_A 161 TSLFIAKMANP--WTISGTPTEISQPTLSWETVGYKVNEGPAVIQHG 205 (468)
T ss_dssp BEEEEEEEEET--TEEEEEEEEEECCCSGGGCSSSCBEEEEEEEEET
T ss_pred CcEEEEEeCCC--ceecCccEEecCCCcccccCCCccccCCEEEEEC
Confidence 34556666553 6654432 1111 122368999999874
|
| >3zxk_A Hiaxhd3; hydrolase, sugar binding protein; HET: XYP EPE; 1.44A {Humicola insolens} PDB: 3zxj_A* 3zxl_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=2.8e-07 Score=99.95 Aligned_cols=164 Identities=11% Similarity=0.067 Sum_probs=103.5
Q ss_pred CCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC------------cCCCcEEeee
Q 011094 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW------------YDINGVWTGS 194 (494)
Q Consensus 127 ~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~------------~D~~Gv~SGS 194 (494)
.|+.-||. ++..+|.|+||-.... + ...+-...|+||+||+..+.+|....+ ....|+|..+
T Consensus 14 ~g~~~DP~-iir~~~~YY~~~st~~----~-~pg~~i~~S~DLvnW~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~WAP~ 87 (542)
T 3zxk_A 14 WEDHPALE-VFRVGSVFYYSSSTFA----Y-SPGAPVLKSYDLVHWTPVTHSVPRLNFGSNYDLPSGTPGAYVKGIWAST 87 (542)
T ss_dssp CSCCCSCE-EEEETTEEEEECCCBT----E-ESEEEEEEESSSSSCEEEEEEESSCCSCGGGGCCSSTTTTTTCSBCSCE
T ss_pred CCCCCCCe-EEEECCEEEEEEecCc----c-CCCeEEEEcCCCCCccccccccccCCccccccccCCcccccCCceECCc
Confidence 46678998 8888999999853211 1 124677899999999999988754221 1146899999
Q ss_pred EEEcc-CCeEEEEEeccCCCccceEEEEEEcCCCCC-----Ccce---EEEcCCCceecCCCCCCCCCCCCCeeEeecCC
Q 011094 195 ATILP-DGQIVMLYTGSTDKSVQVQNLAYPADPSDP-----LLLD---WVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPD 265 (494)
Q Consensus 195 avv~~-dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~-----lL~~---W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~d 265 (494)
+.... ||++||+|+.. ..+.+|++++...| .|++ |++. +... ....||.+++ ++|
T Consensus 88 i~~~~~~G~fYly~~~~-----~~~~v~~a~~p~GPf~~g~~l~~~~~ws~~----~~~~------~~~iDp~~f~-DdD 151 (542)
T 3zxk_A 88 LRYRRSNDRFYWYGCVE-----GRTYLWTSPGGNALANNGEVPPSAWNWQHT----ATID------NCYYDAGLLI-DDD 151 (542)
T ss_dssp EEEETTTTEEEEEEEET-----TEEEEEEEECTTGGGTTTCCCGGGCCCEEE----EEES------SCCTTCEEEE-CTT
T ss_pred EEEECCCCEEEEEEECC-----CcEEEEEECCCCCCccccccccccCccccc----cccC------CCCCCCcEEE-cCC
Confidence 87532 49999999874 45788988876422 0111 6542 1111 2346999965 579
Q ss_pred CeEEEEEeeecCCeeEEEEEE-eCCCCCCEEcCc-ccccCCCCCceEeccEEEec
Q 011094 266 GKWRLTIGSKIGKTGISLVYQ-TTDFKTYELLDE-YLHAVPGTGMWECVDFYPVA 318 (494)
Q Consensus 266 g~w~MviGa~~~~~G~v~lY~-S~Dl~~W~~~~~-ll~~~~~~gmwECPdlf~l~ 318 (494)
|+.||+.|. .+ +.+.+ +.|+..=.-... ++.. ......|-|-+|+.+
T Consensus 152 G~~Yl~~g~----~~-i~~~eL~~d~~~~~~~~~~i~~~-~~g~~~EgP~i~k~~ 200 (542)
T 3zxk_A 152 DTMYIAYGN----PT-INVAQLSPDGTRQVRVQQRVYAH-PQGQTVEGARMYKIR 200 (542)
T ss_dssp SCEEEEECS----SS-EEEEEECTTSSSEEEEEEEEECC-TTCCCCEEEEEEEET
T ss_pred CCEEEEEcC----CC-EEEEEeCCccCcccCCcEEEEeC-CCCccccccEEEEEC
Confidence 999999974 23 33333 456543221111 2221 111268999999975
|
| >3k1u_A Beta-xylosidase, family 43 glycosyl hydrolase; structural genomics, APC20493, family 43 GL hydrolase, PSI-2; HET: MSE; 1.55A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=98.66 E-value=2.6e-07 Score=92.98 Aligned_cols=183 Identities=12% Similarity=0.075 Sum_probs=106.7
Q ss_pred cCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecce--ec-cCCCCcCCCcEEeeeEEEccCCeEEEEE
Q 011094 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI--AM-VPDQWYDINGVWTGSATILPDGQIVMLY 207 (494)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~--AL-~Pd~~~D~~Gv~SGSavv~~dG~~~~~Y 207 (494)
-||. ++.+++.|+||+...... ..+-...|+||+||++... ++ .++......++|..+++. .||+++|+|
T Consensus 18 aDP~-ii~~~d~yY~~~st~~~~-----~g~~i~~S~DL~~w~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~yylyy 90 (330)
T 3k1u_A 18 ADPM-IYKHNDGYYYFTASVPEY-----DRIEVRKAKTIEGLRNAEPVDVWRRHESGEMSNLIWAPEIHF-INGAWYIYF 90 (330)
T ss_dssp EEEE-EEECTTSCEEEEEECTTC-----CEEEEEEESSTGGGTTSCCEEEEECCSSSTTSEEEEEEEEEE-ETTEEEEEE
T ss_pred CCCE-EEEECCEEEEEEeccCCC-----CCEEEEEcCCcCCccCCcceeecccCCCCccCCCeECCEEEE-ECCeEEEEE
Confidence 6997 788889999998865432 2466788999999987652 22 223334456899999864 799999999
Q ss_pred eccCCCc-----cceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec--CCee
Q 011094 208 TGSTDKS-----VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI--GKTG 280 (494)
Q Consensus 208 TG~~~~~-----~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~--~~~G 280 (494)
+...... ...+..+++.+..+|.-..|+.. ..+....+ ..-.||.++ .+.+++|+|+.+... ...+
T Consensus 91 s~~~~~~~~~~~~~~~~~~~~~~~~gP~~~~~~~~---~~~~~~~~---~~~IDp~vf-~Ddd~~~~~~~~~~~~~~~~~ 163 (330)
T 3k1u_A 91 AAAPDKNIEDDTFNHRMFVIQNENENPFTGNWVEK---GRIKTAWE---SFSLDATIF-EHNEKLYYVWAQQDINIKGHS 163 (330)
T ss_dssp EEESSSCCBTTBCCCEEEEEEECSSSTTSSCCEEE---EECCCSSC---SCEEEEEEE-EETTEEEEEEEECCTTSSSSB
T ss_pred EeccCCCCCCcccceeeeEEEeCCCCCcccccccc---ccccCCCC---CCccCceEE-EECCccEEEEeecCCCcCCCc
Confidence 9654321 12334555554444433456643 11111111 123699995 456677777655432 2223
Q ss_pred EEEEEEeCCCCCCEEcCcc--c-cc-----CCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCC
Q 011094 281 ISLVYQTTDFKTYELLDEY--L-HA-----VPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (494)
Q Consensus 281 ~v~lY~S~Dl~~W~~~~~l--l-~~-----~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~ 344 (494)
.+.+.+-+| .++..++. + .. ..+....|-|-+++.+ .+++|..|...
T Consensus 164 ~i~i~~l~~--~~~~~g~~~~i~~~~~~~e~~~~~~~EGp~i~k~~---------------G~YYL~ys~~~ 218 (330)
T 3k1u_A 164 NIYIAEMEN--PWTLKTKPVMLTKPELEWEIKGFWVNEGPAVLKKN---------------GKIFITYSASA 218 (330)
T ss_dssp EEEEEEEEE--TTEECSCCEEEECSCSGGGCSSSCBEEEEEEEEET---------------TEEEEEEEESC
T ss_pred eEEEEECCC--CccccCCcEEecCCCccccccCCceeeCCEEEEEC---------------CEEEEEEEeCC
Confidence 344444332 13333321 1 11 1123357999999975 26777776544
|
| >3qz4_A Endo-1,4-beta-xylanase D; 5-bladed beta-propeller fold, xylan degradation, structural joint center for structural genomics, JCSG; HET: EPE; 1.74A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.54 E-value=1e-06 Score=88.32 Aligned_cols=170 Identities=15% Similarity=0.095 Sum_probs=104.7
Q ss_pred CccccccccceeeeecCC--Cc----ccCCccceEE----CCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-Ceeeccee
Q 011094 110 TNAMFTWQRTSFHFQPEK--NW----MNDPNGPLFY----KGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIA 178 (494)
Q Consensus 110 ~~~~~~w~Rp~~Hf~P~~--gw----mNDPNG~~y~----~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv-hW~~~p~A 178 (494)
+..+..|+....-+.+.. .| +--|. ++++ +|+|||||..+.... +....|.|+|+|.. .|++++..
T Consensus 51 S~DLv~W~~~g~~l~~~~~~~~~~~~~wAP~-v~~~~~~~~Gkyylyyt~~~~~~--~~~~i~va~s~~p~Gpw~~~~~p 127 (311)
T 3qz4_A 51 SKNLKTWKEETVILEMGKNVSWANGNAWAPC-IEEKKIDGKYKYFFYYSANPTTN--KGKQIGVAVADSPTGPFTDLGKP 127 (311)
T ss_dssp ESSSSSCEECCCCEEBTTTBTTEEEEEEEEE-EEEEEETTEEEEEEEEEEEETTC--SSCEEEEEEESSTTCCCEECSSC
T ss_pred CCCCCCcEECceecccccCCCcccCCcCCCe-eEEeeecCCCEEEEEEEeccCCC--CCeeEEEEEECCCCCCceECCcc
Confidence 334556766555455442 33 33575 7788 999999999765432 24678999999976 89997743
Q ss_pred ccCCCCcCCCcEEeeeEEEcc-CCeEEEEEeccCCCccceEEEEE-EcCCCCCCcceEEEcCCCceecCCCCC---CCCC
Q 011094 179 MVPDQWYDINGVWTGSATILP-DGQIVMLYTGSTDKSVQVQNLAY-PADPSDPLLLDWVKYPGNPVLVPPRHI---GPKD 253 (494)
Q Consensus 179 L~Pd~~~D~~Gv~SGSavv~~-dG~~~~~YTG~~~~~~q~q~lA~-S~D~~d~lL~~W~K~~~nPVi~~p~g~---~~~~ 253 (494)
|..........+..+++++++ ||+++|+|.+ ..+.+|. +.|. .+|+.. ...++. +.+. ....
T Consensus 128 ~~~~~~~g~~~~iDp~vf~dd~dG~~yl~~g~------~~i~~~~l~~d~-----~~~~~~-~~~i~~-~~~~~~~~~~~ 194 (311)
T 3qz4_A 128 IITSSPTGRGQQIDVDVFTDPVSGKSYLYWGN------GYMAGAELNDDM-----LSIKEE-TTVVLT-PKGGTLQTYAY 194 (311)
T ss_dssp SBCSCTTSSSBSCCCEEEECTTTCCEEEEECB------SSCEEEEBCTTS-----SSBCGG-GCEECC-CCCCCTTTTCC
T ss_pred eEcCCCCCCcccccccEEEECCCCcEEEEEcC------CCEEEEEeCCcc-----cccCCC-ceEEeC-CCCCcccccce
Confidence 333221112346788998876 8999999975 1233443 4442 455432 123332 2221 1123
Q ss_pred CCCCeeEeecCCCeEEEEEeeecCCee--EEEEEEeCCCC-CCEEcC
Q 011094 254 FRDPTTAWAGPDGKWRLTIGSKIGKTG--ISLVYQTTDFK-TYELLD 297 (494)
Q Consensus 254 fRDP~V~w~~~dg~w~MviGa~~~~~G--~v~lY~S~Dl~-~W~~~~ 297 (494)
.--|++ ++ .+|+|||++.+...... .+.+++|+++. -|+..+
T Consensus 195 ~EgP~i-~k-~~g~YyL~~s~~~~~~~~y~~~~~~S~~~~GPw~~~~ 239 (311)
T 3qz4_A 195 REAPYV-IY-RKGIYYFFWSVDDTGSPNYHVVYGTAQSPLGPIEVAK 239 (311)
T ss_dssp CEEEEE-EE-ETTEEEEEEEESCTTSTTCEEEEEEESSTTCCCEEEE
T ss_pred eeccEE-EE-ECCEEEEEEEcCCCCCCCceEEEEEcCCCCCCCEeCC
Confidence 456888 44 68999999886532211 56688999976 498865
|
| >1uv4_A Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hydrolase, propeller, catalysis; 1.50A {Bacillus subtilis} SCOP: b.67.2.1 | Back alignment and structure |
|---|
Probab=98.42 E-value=4.4e-06 Score=82.77 Aligned_cols=149 Identities=14% Similarity=0.123 Sum_probs=92.2
Q ss_pred ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc--CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEE
Q 011094 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI--HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLY 207 (494)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv--hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~Y 207 (494)
+-.|. +++++|+|||||..+..+. .+...++|+|+|+. .|++.+..|..... +...+..+++++++||+.+|+|
T Consensus 73 ~wAP~-v~~~~G~yylyyt~~~~~~--~~~~i~va~s~~p~~Gpw~~~~~~l~~~~~-~~~~~iDp~vf~d~dG~~Yl~~ 148 (293)
T 1uv4_A 73 QWAPD-IQYYNGKYWLYYSVSSFGS--NTSAIGLASSTSISSGGWKDEGLVIRSTSS-NNYNAIDPELTFDKDGNPWLAF 148 (293)
T ss_dssp CEEEE-EEEETTEEEEEEEECCTTC--SCEEEEEEEESCTTTTCCEEEEEEEEECTT-SSSCCCSCEEEECTTSCEEEEE
T ss_pred eecce-EEEECCEEEEEEEecCCCC--CcceEEEEECCCCCCCCCccCCccEecCCC-CCCCCCCCCeEECCCCCEEEEE
Confidence 44565 6788999999998765432 24678999999997 89987654543221 1234568888877899999999
Q ss_pred eccCCCccceEEEEE-EcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-----CCeeE
Q 011094 208 TGSTDKSVQVQNLAY-PADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----GKTGI 281 (494)
Q Consensus 208 TG~~~~~~q~q~lA~-S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-----~~~G~ 281 (494)
.+.. ..+.++. +.|. .++... ...++..+. ....+-.|.+ ++ .+|+|||++.+.. +..-.
T Consensus 149 g~~~----~~i~~~~l~~d~-----~~~~g~-~~~i~~~~~--~~~~~EgP~i-~k-~~g~yyL~~s~~~~~~g~~~~y~ 214 (293)
T 1uv4_A 149 GSFW----SGIKLTKLDKST-----MKPTGS-LYSIAARPN--NGGALEAPTL-TY-QNGYYYLMVSFDKCCDGVNSTYK 214 (293)
T ss_dssp CBST----TCEEEEEECTTT-----CSEEEE-EEEEECCTT--TTTCEEEEEE-EE-ETTEEEEEEEEECSSSSSCCEEE
T ss_pred EecC----CCEEEEEECchh-----CccCCc-ceEEeecCC--CCCccCccEE-EE-ECCEEEEEEEeCCCcCCCCCcce
Confidence 6532 2244554 3332 233211 011322221 1223457888 44 5899999987641 22225
Q ss_pred EEEEEeCCCC-CCEEc
Q 011094 282 SLVYQTTDFK-TYELL 296 (494)
Q Consensus 282 v~lY~S~Dl~-~W~~~ 296 (494)
+.+++|+++. -|+..
T Consensus 215 ~~~~~s~~~~GP~~~~ 230 (293)
T 1uv4_A 215 IAYGRSKSITGPYLDK 230 (293)
T ss_dssp EEEEEESSTTCCCBCT
T ss_pred EEEEEeCCCCCCCCcc
Confidence 7788999875 56654
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=3.8e-06 Score=88.48 Aligned_cols=152 Identities=13% Similarity=0.127 Sum_probs=96.8
Q ss_pred CccccccccceeeeecCCC--cccCCccceEECCEEEEEEeeCCC-CCCC-CCcEEEEEEecCccCeee--cceeccCCC
Q 011094 110 TNAMFTWQRTSFHFQPEKN--WMNDPNGPLFYKGWYHLFYQYNPD-SAVW-GNITWGHAVSADLIHWLY--LPIAMVPDQ 183 (494)
Q Consensus 110 ~~~~~~w~Rp~~Hf~P~~g--wmNDPNG~~y~~G~YHLFYQ~nP~-~~~w-g~~~WGHA~S~DLvhW~~--~p~AL~Pd~ 183 (494)
+..+..|++..-=+.|... =+-.|. ++.++|+|+|||..+.. ...+ .....++|+|+|+.+|+. ..++|.+..
T Consensus 51 S~Dlv~W~~~~~aL~p~~~~~g~~sgs-av~~~g~~~l~YTg~~~~~~~~~~~~~q~lA~S~D~~~w~k~~~~Pvi~~~p 129 (432)
T 1w2t_A 51 SDDLVHWRHLPVALYPDDETHGVFSGS-AVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISKPP 129 (432)
T ss_dssp ESSSSSCEEEEEEECCSSTTEEEEEEE-EEEETTEEEEEEEEEECCCSSCCCEEEEEEEEESSSSCCEECTTCCSBCSCS
T ss_pred cCCCcCeEECCccCCCCCCCCCEEeeE-EEEECCEEEEEEecCccCCCCCCceEEEEEEEeCCCCeEEecCCCceEeCCC
Confidence 4456678655543445331 112344 45679999999986533 1112 235689999999999998 445554432
Q ss_pred CcCCCcEEeeeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeec
Q 011094 184 WYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAG 263 (494)
Q Consensus 184 ~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~ 263 (494)
.-...++-..+++. .+|+++|+|.+........+.++.|.|+ ++|+.. .++... .+ ...|-.|.+ ++
T Consensus 130 ~~~~~~fRDP~Vf~-~dg~~~m~~g~~~~~~~g~i~ly~S~Dl-----~~W~~~--g~~~~~-~~--g~~~EcP~l-f~- 196 (432)
T 1w2t_A 130 EEGTHAFRDPKVNR-SNGEWRMVLGSGKDEKIGRVLLYTSDDL-----FHWKYE--GAIFED-ET--TKEIDCPDL-VR- 196 (432)
T ss_dssp STTEEEEEEEEEEE-CSSSEEEEEEEEETTTEEEEEEEEESSS-----SSCEEE--EEEEEE-TT--CSCCEEEEE-EE-
T ss_pred ccccccccCCEEEE-ECCEEEEEEEEecCCCCcEEEEEECCCC-----CCceEc--cccccC-CC--CCEEECCeE-EE-
Confidence 11123466777754 5899999998764333456778888885 899986 234332 11 235778998 44
Q ss_pred CCCeEEEEEeee
Q 011094 264 PDGKWRLTIGSK 275 (494)
Q Consensus 264 ~dg~w~MviGa~ 275 (494)
.+|+|+|+++..
T Consensus 197 ~~g~~vL~~s~~ 208 (432)
T 1w2t_A 197 IGEKDILIYSIT 208 (432)
T ss_dssp ETTEEEEEEEET
T ss_pred ECCEEEEEEeCC
Confidence 578999998864
|
| >1gyh_A Arabinan endo-1,5-alpha-L-arabinosidase A; arabinanase, hydrolase, propeller, catalysis, pseudomonas; 1.89A {Cellvibrio cellulosa} SCOP: b.67.2.1 PDB: 1gyd_B 1gye_B* | Back alignment and structure |
|---|
Probab=98.27 E-value=1.4e-05 Score=80.12 Aligned_cols=156 Identities=15% Similarity=0.105 Sum_probs=92.7
Q ss_pred cCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCc--cC----eeecceeccCCCCcCCCcEEeeeEEEccCCeEE
Q 011094 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADL--IH----WLYLPIAMVPDQWYDINGVWTGSATILPDGQIV 204 (494)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DL--vh----W~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~ 204 (494)
-.|. +++++|+|||||..+..+. .....|+|+|+|+ .. |++.+..+.+....+......+++++++||+.+
T Consensus 65 wAP~-v~~~~g~~ylyyt~~~~~~--~~~~igva~s~~~dp~gp~~~w~~~~~v~~~~~~~~~~~~iDp~vf~D~dG~~Y 141 (318)
T 1gyh_A 65 WAPD-IYQHKGLFYLYYSVSAFGK--NTSAIGVTVNKTLNPASPDYRWEDKGIVIESVPQRDLWNAIAPAIIADDHGQVW 141 (318)
T ss_dssp EEEE-EEEETTEEEEEEEECCTTS--CCEEEEEEEESCSCTTSTTCCCEEEEEEEEECTTTCSSCCCCCEEEECTTSCEE
T ss_pred ccCe-EEEECCEEEEEEEeccCCC--CcceEEEEEeCCCCCCCCCcceecCCcccccCCCCCCCCcccCCeEECCCCCEE
Confidence 3565 6778999999999765432 2456899999983 23 998765554422223334678999877899999
Q ss_pred EEEeccCCCccceEEEEEE-cCCC-CCCcceEEEcCCC--ce-ecCCCCCCCCCCCCCeeEeecCCCeEEEEEeee----
Q 011094 205 MLYTGSTDKSVQVQNLAYP-ADPS-DPLLLDWVKYPGN--PV-LVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK---- 275 (494)
Q Consensus 205 ~~YTG~~~~~~q~q~lA~S-~D~~-d~lL~~W~K~~~n--PV-i~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~---- 275 (494)
|+|.+.. ..+.+|.. .|.. -..+..|+....+ ++ +... ......+--|.+ ++ .+|+|||++.+.
T Consensus 142 l~~g~~~----~~i~~~~l~~d~~~~g~~~~w~~~~~~~~~~~~~~~-~~~~~~~EgP~i-~k-~~g~yYL~~s~~~~~~ 214 (318)
T 1gyh_A 142 MSFGSFW----GGLKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDS-QAGSAQIEAPFI-LR-KGDYYYLFASWGLCCR 214 (318)
T ss_dssp EEECBST----TCEEEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTT-SCCSCCEEEEEE-EE-ETTEEEEEEEESCCSC
T ss_pred EEeeccC----CCEEEEEeCCccccccceeecceecccCcceeeccc-CCCCcceeccEE-EE-ECCEEEEEEEeCCCcC
Confidence 9997642 22445543 3310 0012466653111 11 1111 111123457888 44 589999998753
Q ss_pred -cCCeeEEEEEEeCCCC-CCEEc
Q 011094 276 -IGKTGISLVYQTTDFK-TYELL 296 (494)
Q Consensus 276 -~~~~G~v~lY~S~Dl~-~W~~~ 296 (494)
.+..-.+.+++|+++. -|+..
T Consensus 215 g~~~~y~~~~~rS~s~~GP~~~~ 237 (318)
T 1gyh_A 215 KGDSTYHLVVGRSKQVTGPYLDK 237 (318)
T ss_dssp GGGCCCEEEEEEESSTTSCCBCT
T ss_pred CCCCcceEEEEEcCCCCCCCCcC
Confidence 1122257788999865 57764
|
| >3kst_A Endo-1,4-beta-xylanase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=98.21 E-value=1.4e-05 Score=80.10 Aligned_cols=168 Identities=15% Similarity=0.104 Sum_probs=102.4
Q ss_pred CccccccccceeeeecCCCcc----cCCccceEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-Ceeecce-eccC
Q 011094 110 TNAMFTWQRTSFHFQPEKNWM----NDPNGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPI-AMVP 181 (494)
Q Consensus 110 ~~~~~~w~Rp~~Hf~P~~gwm----NDPNG~~y~--~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv-hW~~~p~-AL~P 181 (494)
+..+..|+....-+.+...|. -.|. +++. +|+|||||..+ ...+.|+|+|.. .|+.... .+..
T Consensus 55 S~DLv~W~~~g~~l~~~~~~~~~~~wAP~-v~~~~~~g~~yl~yt~~--------~~i~va~s~~p~Gpw~~~~~~p~~~ 125 (306)
T 3kst_A 55 SDDLKNWKREGQALSATDSYGTWGFWAPE-VYYVESKKKFYLFYSAE--------EHICVATSTTPEGPFRQEVKQPIWS 125 (306)
T ss_dssp ESSSSEEEEEEEEEEGGGSSCSSCCEEEE-EEEETTTTEEEEEEEET--------TEEEEEEESSTTCCCBCSSCCCSSS
T ss_pred eCCccccEECceecCCCCcccccccccCe-EEEECCCCEEEEEEECC--------CcEEEEEcCCCCCCcEeCCCccccC
Confidence 344567876665555554442 3454 5577 99999999865 257999999977 7987531 1211
Q ss_pred CCCcCCCcEEeeeEEEccCCeEEEEEeccCCCccceEEEEE-EcCCCCCCcceEEEcCCCceecCCCCCC---CCCCCCC
Q 011094 182 DQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAY-PADPSDPLLLDWVKYPGNPVLVPPRHIG---PKDFRDP 257 (494)
Q Consensus 182 d~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~-S~D~~d~lL~~W~K~~~nPVi~~p~g~~---~~~fRDP 257 (494)
.....+++++++||+.+|+|...... +.+.+|. +.| +.+|.......++.+...+. ...+--|
T Consensus 126 ------~~~iDp~vf~D~dG~~Yl~~~~~~~g--~~i~~~~ls~d-----~~~~~~~~~~~~~~~~~~w~~~~~~~~EgP 192 (306)
T 3kst_A 126 ------EKSIDTSLFIDDDGTPYLYFVRFTDG--NVIWVAQMTDD-----LMSIKTETLNQCIKAEVSWELLQGKVAEGP 192 (306)
T ss_dssp ------SCCEEEEEEECTTSCEEEEEEEESSS--EEEEEEEBCTT-----SSCBCGGGCEEEECCCSGGGCSSSSBEEEE
T ss_pred ------CCcccceEEEeCCCCEEEEEEEeCCC--CEEEEEEeCcc-----cccccCcceeeeccCCccceecCCCceecc
Confidence 34678999887899999999754321 3344554 333 35665322222332211111 1233468
Q ss_pred eeEeecCCCeEEEEEeeec--CCeeEEEEEEeCCCC-CCEEc-C-cccc
Q 011094 258 TTAWAGPDGKWRLTIGSKI--GKTGISLVYQTTDFK-TYELL-D-EYLH 301 (494)
Q Consensus 258 ~V~w~~~dg~w~MviGa~~--~~~G~v~lY~S~Dl~-~W~~~-~-~ll~ 301 (494)
++ ++ .+|+|||++.+.. +..-++.+++|+++. -|+.. + +++.
T Consensus 193 ~i-~k-~~G~YYL~~S~~~~~~~~y~v~~a~S~s~~GPw~~~~~~pil~ 239 (306)
T 3kst_A 193 SL-LK-KNGVYYLIYSANHYENKGYGVGYATSDTPMGPWVKYSKNPLLQ 239 (306)
T ss_dssp EE-EE-ETTEEEEEEEESCTTSTTCEEEEEEESSTTCCCEECTTCCSBS
T ss_pred eE-EE-ECCEEEEEEEeCCCCCCCceEEEEEeCCCCCCCEeCCCCeeEe
Confidence 88 44 6899999987642 222256788999976 79873 3 4554
|
| >3cu9_A Intracellular arabinanase; glycosyl hydrolase, high resolution, beta-prope geobacillus stearothermophilus, hydrolase; HET: GOL; 1.06A {Geobacillus stearothermophilus} PDB: 3d61_A* 3d60_A 3d5y_A 3d5z_A* 1wl7_A | Back alignment and structure |
|---|
Probab=97.97 E-value=0.0001 Score=73.67 Aligned_cols=170 Identities=16% Similarity=0.230 Sum_probs=98.3
Q ss_pred CccccccccceeeeecCCCc------------ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCc---cC---
Q 011094 110 TNAMFTWQRTSFHFQPEKNW------------MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADL---IH--- 171 (494)
Q Consensus 110 ~~~~~~w~Rp~~Hf~P~~gw------------mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DL---vh--- 171 (494)
+..+..|.+...-|.+...| +-.|. +++++|+|||||..+..+. .....|+|+|+|+ -.
T Consensus 50 S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~~~wAP~-v~~~~g~yylyyt~~~~~~--~~~~igva~s~~~dP~gp~~~ 126 (314)
T 3cu9_A 50 SEDGVHWENMGWVFPSLPDWYKQYVPEKDEDHLWAPD-ICFYNGIYYLYYSVSTFGK--NTSVIGLATNQTLDPRDPDYE 126 (314)
T ss_dssp ESSSSEEEEEEESCSSCCTTHHHHCTTCCSCEEEEEE-EEEETTEEEEEEEECCTTC--CCEEEEEEEESCSCTTSTTCC
T ss_pred CcCCCCccCCCcccCCcchhhhccCCCcccCceecCc-EEEECCEEEEEEEeccCCC--CCceEEEEEeCCCCCCCCCcC
Confidence 34456776555444443333 33465 6778999999999765432 2467899999984 23
Q ss_pred eeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEeccCCCccceEEEEEEc-CCCCCCcceEEEcCCCce-ecCCCCC
Q 011094 172 WLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPA-DPSDPLLLDWVKYPGNPV-LVPPRHI 249 (494)
Q Consensus 172 W~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~-D~~d~lL~~W~K~~~nPV-i~~p~g~ 249 (494)
|++.+..+.... .+......+++++++||+.+|+|.+... .+.++... |.+.+. ..+ .++ +... +.
T Consensus 127 w~~~~~~~~~~~-~~~~~~iDp~vf~D~dG~~Yl~~g~~~~----~i~~~~l~~d~~~~~-~~~-----~~~~~~~~-~~ 194 (314)
T 3cu9_A 127 WKDMGPVIHSTA-SDNYNAIDPNVVFDQEGQPWLSFGSFWS----GIQLIQLDTETMKPA-AQA-----ELLTIASR-GE 194 (314)
T ss_dssp CEEEEEEEEECT-TSSSCCCSCEEEECTTSCEEEEECBSTT----CEEEEECCTTTCSCC-TTC-----CCEEEECC-SS
T ss_pred cccCCeEecCCC-CCCCCccCCCeEEcCCCCEEEEEeccCC----cEEEEEECcccCccc-CCC-----ceEEeccc-CC
Confidence 998765443321 1223456889887789999999987421 24455432 221110 011 111 1111 11
Q ss_pred CCCCCCCCeeEeecCCCeEEEEEeee-----cCCeeEEEEEEeCCCC-CCEEc
Q 011094 250 GPKDFRDPTTAWAGPDGKWRLTIGSK-----IGKTGISLVYQTTDFK-TYELL 296 (494)
Q Consensus 250 ~~~~fRDP~V~w~~~dg~w~MviGa~-----~~~~G~v~lY~S~Dl~-~W~~~ 296 (494)
....+-.|.+ ++ .+|+|||++.+. .+..-.+.+++|+++. -|+..
T Consensus 195 ~~~~~EgP~i-~k-~~G~yyL~~s~~~~~~g~~~~y~~~~~~s~s~~GP~~~~ 245 (314)
T 3cu9_A 195 EPNAIEAPFI-VC-RNGYYYLFVSFDFCCRGIESTYKIAVGRSKDITGPYVDK 245 (314)
T ss_dssp SSCCEEEEEE-EE-ETTEEEEEEEESCCSSGGGCCCEEEEEEESSTTSCCBCT
T ss_pred CCCccCccEE-EE-ECCEEEEEEEcCCcccCCCCcceEEEEEeCCCCCCCCcC
Confidence 1123557888 44 589999998753 1112256788999875 57664
|
| >3qee_A Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; 5-bladed beta propeller, hydrolase; 1.64A {Cellvibrio japonicus} PDB: 3qed_A* 3qef_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=7.5e-05 Score=74.80 Aligned_cols=163 Identities=11% Similarity=0.027 Sum_probs=97.2
Q ss_pred cccccccceeeeecC-CCc----ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCc-cCeee-cceeccCCC-
Q 011094 112 AMFTWQRTSFHFQPE-KNW----MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADL-IHWLY-LPIAMVPDQ- 183 (494)
Q Consensus 112 ~~~~w~Rp~~Hf~P~-~gw----mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DL-vhW~~-~p~AL~Pd~- 183 (494)
.+..|+....-+.+. ..| +--|. +++++|+|||||..+..+..+ ....|.|+|+|. -.|++ .+..|....
T Consensus 52 DLv~W~~~g~~l~~~~~~~~~~~~WAP~-i~~~~Gkyylyyt~~~~~~~~-~~~i~va~s~~p~Gpw~~~~~~pl~~~~~ 129 (307)
T 3qee_A 52 DMANWEAHGPGLRAKDFTWAKGDAWASQ-VIERNGKFYWYVTVRHDDTKP-GFAIGVAVGDSPIGPFKDALGKALITNDM 129 (307)
T ss_dssp SSSSCEEEEEEEEGGGSTTEEEEEEEEE-EEEETTEEEEEEEEEECTTSC-SEEEEEEEESSTTCCCEESSSSCSBCGGG
T ss_pred CCCCceECccccccCCCCcccCCccCce-EEEECCEEEEEEEeccCCCCC-ceEEEEEEECCCCCCCEeCCCCeeEecCc
Confidence 345675554444432 122 34565 678899999999876543322 367899999995 47998 343232211
Q ss_pred ---CcCCCcEEeeeEEEccCCeEEEEEeccCCCccceEEEE-EEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCee
Q 011094 184 ---WYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLA-YPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTT 259 (494)
Q Consensus 184 ---~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA-~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V 259 (494)
.........++++++.||+.+|+|.+.. +.++ .+.|. .+|.... ..+..+. ..+-.|++
T Consensus 130 ~~~~~~~~~~iDp~vf~DddG~~Yl~~g~~~------i~~~~l~~d~-----~~~~g~~--~~i~~~~----~~~EgP~i 192 (307)
T 3qee_A 130 TTDTPIDWDDIDPSVFIDDDGQAYLFWGNTR------PRYAKLKKNM-----VELDGPI--RAIEGLP----EFTEAIWV 192 (307)
T ss_dssp CCSSCCSCCSCCCEEEECTTSCEEEEECSSS------CEEEEECTTS-----SSEEEEE--EECCCCT----TEEEEEEE
T ss_pred cccCCCCcCcccCceEECCCCCEEEEEeCCc------EEEEEECCcc-----ccccCce--EEeCCCC----CccCceEE
Confidence 0011235788888877999999997541 2233 34443 5665321 1222111 12457888
Q ss_pred EeecCCCeEEEEEeeecCCeeEEEEEEeCCCC-CCEEcC
Q 011094 260 AWAGPDGKWRLTIGSKIGKTGISLVYQTTDFK-TYELLD 297 (494)
Q Consensus 260 ~w~~~dg~w~MviGa~~~~~G~v~lY~S~Dl~-~W~~~~ 297 (494)
++ .+|+|||++.+.. .-.+.+.+|+++. -|+..+
T Consensus 193 -~k-~~g~YyL~~s~~~--~~~~~~~~s~~~~GP~~~~~ 227 (307)
T 3qee_A 193 -HK-YQDNYYLSYAMGF--PEKIGYAMGKSIKGPWVYKG 227 (307)
T ss_dssp -EE-CC-CEEEEEEETT--TTEEEEEEESSTTCCCEEEE
T ss_pred -EE-ECCEEEEEEECCC--CcEEEEEECCCCCCCcEECC
Confidence 44 7899999988742 2356677999976 788875
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00035 Score=75.15 Aligned_cols=187 Identities=12% Similarity=0.114 Sum_probs=108.2
Q ss_pred cccccccceeeeecCC--Cc----ccCCccceEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CeeecceeccCC
Q 011094 112 AMFTWQRTSFHFQPEK--NW----MNDPNGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPD 182 (494)
Q Consensus 112 ~~~~w~Rp~~Hf~P~~--gw----mNDPNG~~y~--~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv-hW~~~p~AL~Pd 182 (494)
.+..|.....-|.+.. .| +--|. ++|+ +|+|||||.... +..++....|.|+|+|.. .|++.+. +.|-
T Consensus 93 DLv~W~~~g~~l~~~~~~~~~~~~~WAP~-v~~~~~~Gkyymy~~~~~-~~~~~~~~igvats~~p~Gpw~~~g~-~~p~ 169 (526)
T 3vsf_A 93 DLVNWEYRGEVLSRNSAPELNHCNIERPK-VMYNASTGEFVMWMHWEN-GINYGQARAAVAYSKTPDGKFTYIRS-FRPM 169 (526)
T ss_dssp SSSSCEEEEEEEETTSSGGGSSCEEEEEE-EEECTTTCCEEEEEEEEC-SSCSCCCEEEEEEESSSSSCCEEEEE-ECSS
T ss_pred CCCCcCCCCccCCCCCCcCcccCceECCE-EEEECCCCEEEEEEEeeC-CCCCCcceEEEEEcCCCCCCCEeccc-cccc
Confidence 3456765554444322 12 34454 5665 799999998762 233456789999999987 6987653 1221
Q ss_pred C---CcC----CCcEEeeeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCC
Q 011094 183 Q---WYD----INGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFR 255 (494)
Q Consensus 183 ~---~~D----~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fR 255 (494)
. +.| ...+..+++++++||+.||+|.+..+ ..+.++.-.+. +..+.... ..+. . + ...-
T Consensus 170 ~~~g~~~~~~~~~~~iDp~vf~D~dG~~Yl~~~~~~~---~~i~i~~l~~d----~~~~~~~~-~~~~-~--g---~~~E 235 (526)
T 3vsf_A 170 QDTGVMDHGLPGYMSRDCNVFVDTDGKGYFISAANEN---MDLHLYELTPD----YKNIASLK-AKLF-V--G---QQRE 235 (526)
T ss_dssp CTTCCEETTEESCCCCSEEEEECTTSCEEEEEEETTT---TEEEEEEECTT----SSSEEEEE-EEES-T--T---SCCE
T ss_pred cccccccCCCCCcccccccEEECCCCCEEEEEEecCC---CceEEEEcCCC----cccccCce-EEeC-C--C---CCcC
Confidence 1 111 24567888888889999999986532 23444433221 23444321 1111 1 1 2345
Q ss_pred CCeeEeecCCCeEEEEEeeecCCe-eEEEEEEeCCCC-CCEEcCcccccCCCCCceEeccEEEecc
Q 011094 256 DPTTAWAGPDGKWRLTIGSKIGKT-GISLVYQTTDFK-TYELLDEYLHAVPGTGMWECVDFYPVAI 319 (494)
Q Consensus 256 DP~V~w~~~dg~w~MviGa~~~~~-G~v~lY~S~Dl~-~W~~~~~ll~~~~~~gmwECPdlf~l~~ 319 (494)
.|++ ++ .+|+|||++....... -.+.+++|+++. -|+..+.+.. ..+.-=....++++.+
T Consensus 236 gP~i-~k-~~G~YYL~~S~~tg~~~~~~~~a~S~s~~GPw~~~~~~~~--~~~~~~q~~~v~~~~g 297 (526)
T 3vsf_A 236 APCL-IK-RNGYYYLITSGCTGWNPNQAKYAYSKDLASGWSQLYNLGN--STTYRSQPTFIIPVQG 297 (526)
T ss_dssp EEEE-EE-SSSCEEEEEECCCTTSCCCEEECEESCSSSCCCCCEEESS--TTTTTCEEEEEEEEEC
T ss_pred CeEE-EE-ECCEEEEEEcCCCCcCCCceEEEEeCCCCCCceeCCccCC--CCccCCCCeeEEEecC
Confidence 8999 54 6899999986432111 146678999875 5877665541 1222334555666653
|
| >3c2u_A Xylosidase/arabinosidase; tetramer, glycoside hydrolase, GH43, alpha-L- arabinofuranosidase; HET: B3P; 1.30A {Selenomonas ruminantium} PDB: 1y7b_A* 1yi7_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=0.00039 Score=74.84 Aligned_cols=154 Identities=14% Similarity=0.145 Sum_probs=93.1
Q ss_pred CcccCCccceEECCEEEEEEeeCCC-CCCCCCcEEEEEEecCccC-eeecceeccCCCCcCCCcEEeeeEEEccCCeEEE
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPD-SAVWGNITWGHAVSADLIH-WLYLPIAMVPDQWYDINGVWTGSATILPDGQIVM 205 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~-~~~wg~~~WGHA~S~DLvh-W~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~ 205 (494)
+-+--|. ++|++|+|||||..... +..+.+...+.|+|+|... |++ |+.+. ...+.+++++++||+.+|
T Consensus 70 ~~~WAP~-i~~~~g~~yly~t~~~~~~g~~~~~~~~va~s~~p~Gpw~~-p~~~~-------~~~iDp~~f~DddG~~Yl 140 (538)
T 3c2u_A 70 GGIWAPD-LSYADGKFWLIYTDVKVVDGMWKDCHNYLTTAEDIKGPWSK-PILLN-------GAGFDASLFHDPSGKKYL 140 (538)
T ss_dssp CEECSCE-EEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTCCCCC-CEEEE-------CSCSCCEEEECTTSCEEE
T ss_pred CCEECCe-EEEECCEEEEEEEeccCCCCCcccccEEEEEECCCCCCccc-cEecC-------CCcCCCeeEECCCCCEEE
Confidence 3355776 78899999999985422 2223345678999999885 986 44331 124678888888999999
Q ss_pred EEeccCC--C--ccceEEEEEE-cCCCCCCcceEEEcCCCc-eecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCe
Q 011094 206 LYTGSTD--K--SVQVQNLAYP-ADPSDPLLLDWVKYPGNP-VLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT 279 (494)
Q Consensus 206 ~YTG~~~--~--~~q~q~lA~S-~D~~d~lL~~W~K~~~nP-Vi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~ 279 (494)
+|..... . ....+.++.- .|. ++.. +.+ .|..+.+ ....--|++ ++ .+|.|||++.+.....
T Consensus 141 ~~~~~~~~~~~~~~~~i~~~~l~~d~-------~~~~-g~~~~i~~~~~--~~~~EgP~i-~k-~~G~YYL~~s~gg~~~ 208 (538)
T 3c2u_A 141 VNMYWDQRVYHHNFYGIALQEYSVAE-------EKLI-GKPEIIYKGTD--IAYTEGPHL-YY-INDMYYLMTAEGGTTY 208 (538)
T ss_dssp EEEEECCCTTSCSEEEEEEEEEETTT-------TEEC-SCCEEEECCCT--TCCCEEEEE-EE-ETTEEEEEEEESCSST
T ss_pred EEEecCCccCCCCCCCEEEEEECCcc-------CCCC-CCCEEEecCCC--CCccccceE-EE-ECCEEEEEEecCCCCC
Confidence 9974321 1 1234455543 332 1211 222 2222211 123457888 44 6899999987642111
Q ss_pred e-EEEEEEeCCCC-CCEEcC--ccccc
Q 011094 280 G-ISLVYQTTDFK-TYELLD--EYLHA 302 (494)
Q Consensus 280 G-~v~lY~S~Dl~-~W~~~~--~ll~~ 302 (494)
+ .+.+++|+++. -|+..+ +++..
T Consensus 209 ~~~~~~~rS~s~~GP~~~~~~~pil~~ 235 (538)
T 3c2u_A 209 QHSETIARSKTIHGPYEIQPDYPLLSA 235 (538)
T ss_dssp TCEEEEEEESSTTCCCEECTTCCSBCC
T ss_pred CeEEEEEEECCCCCCCccCCCCceEec
Confidence 2 56789999976 788864 45543
|
| >1yrz_A Xylan beta-1,4-xylosidase; structural genomics, nysgxrc target T1997, PSI, structure initiative; 2.00A {Bacillus halodurans} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=97.80 E-value=0.00021 Score=76.62 Aligned_cols=154 Identities=12% Similarity=0.055 Sum_probs=92.3
Q ss_pred CcccCCccceEECCEEEEEEeeCCC-CCCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEE
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPD-SAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVM 205 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~-~~~wg~~~WGHA~S~DLv-hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~ 205 (494)
+-+-.|. ++|++|+|||||..... +..+.....+.|+|+|.. .|++ |+.+ ....+.++++.++||+.+|
T Consensus 72 ~~~wAP~-i~~~~g~~yl~yt~~~~~~g~~~~~~~~va~s~~p~Gpw~~-p~~~-------~~~~iDp~vf~D~dG~~Yl 142 (528)
T 1yrz_A 72 GGIWAPC-LSYHDGTFYLIYTDVKQWHGAFKDAHNYLVTAQNIEGPWSD-PIYL-------NSSGFDPSLFHDDDGRKWL 142 (528)
T ss_dssp CEECSCE-EEEETTEEEEEEEEEEECSSSCCEEEEEEEEESSSSSCCCC-CEEC-------CCSCSCCEEEECTTSCEEE
T ss_pred CCEECCe-EEEECCEEEEEEecccCCCCCcccceEEEEEeCCCCCCccc-cEEC-------CCCcCCCceEECCCCCEEE
Confidence 3355776 78899999999984321 112234457899999987 4986 4333 1235688888878999999
Q ss_pred EEeccCC--C--ccceEEEEEE-cCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-CCe
Q 011094 206 LYTGSTD--K--SVQVQNLAYP-ADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKT 279 (494)
Q Consensus 206 ~YTG~~~--~--~~q~q~lA~S-~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-~~~ 279 (494)
+|..... . ..+.+.++.. .|. .+.... ...|.... .....-.|++ ++ .+|+|||++.+.. ...
T Consensus 143 ~~~~~~~~~~~~~~~~i~~~~l~~d~-----~~~~g~-~~~i~~~~---~~~~~EgP~i-~k-~~G~YYL~~s~~g~~~~ 211 (528)
T 1yrz_A 143 VNMIWDYRKGNHPFAGIILQEYSEAE-----QKLVGP-VKNIYKGT---DIQLTEGPHL-YK-KDGYYYLLVAEGGTEYE 211 (528)
T ss_dssp EEEEECCCTTSCSEEEEEEEEEETTT-----TEEEEE-EEEEECCC---TTCCCEEEEE-EE-ETTEEEEEEEESCSSTT
T ss_pred EEeeccCCCCCCCCCeEEEEEECCcc-----CCCCCC-CEEEEcCC---CCCccCCCEE-EE-ECCEEEEEEeCCCCCCC
Confidence 9653221 1 1234555543 332 222211 11232211 1123457888 44 6899999987642 111
Q ss_pred eEEEEEEeCCCC-CCEEcC--cccc
Q 011094 280 GISLVYQTTDFK-TYELLD--EYLH 301 (494)
Q Consensus 280 G~v~lY~S~Dl~-~W~~~~--~ll~ 301 (494)
-.+.+++|+++. -|+... +++.
T Consensus 212 ~~~~~~rs~~~~GP~~~~~~~pil~ 236 (528)
T 1yrz_A 212 HAATLARSQSIDGPYETDPSYPLVT 236 (528)
T ss_dssp CEEEEEEESSTTCCCEECTTCCSEE
T ss_pred cEEEEEEECCCCCCCCcCCCCeEEE
Confidence 256788999976 799874 4554
|
| >1yif_A Beta-1,4-xylosidase; glycosidase, xylan, structural genomics, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00056 Score=73.35 Aligned_cols=154 Identities=13% Similarity=0.108 Sum_probs=92.6
Q ss_pred CcccCCccceEECCEEEEEEeeCC-CCCCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEE
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNP-DSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVM 205 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP-~~~~wg~~~WGHA~S~DLv-hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~ 205 (494)
+-+--|. ++|++|+|||||.... .+..+.....+.|+|+|.. .|++ |+.+.. ..+.+++++++||+.+|
T Consensus 70 ~~~WAP~-i~~~~g~~yl~yt~~~~~~g~~~~~~~~va~s~~p~Gpw~~-p~~~~~-------~~iDp~~f~D~dG~~Yl 140 (533)
T 1yif_A 70 GGVWAPC-LSYSDGKFWLIYTDVKVVDGAWKDCHNYLVTCETINGDWSE-PIKLNS-------SGFDASLFHDTDGKKYL 140 (533)
T ss_dssp CBBCSCE-EEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTSCCCC-CEECCC-------SCSCCEEEECTTSCEEE
T ss_pred CCEECce-EEEECCEEEEEEEeccCCCCCcccccEEEEEeCCCCCCccc-cEEcCC-------CcCCCceEECCCCCEEE
Confidence 3456786 7889999999998532 2222334567999999986 6986 443321 24678888888999999
Q ss_pred EEeccCC--C--ccceEEEEE-EcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-CCe
Q 011094 206 LYTGSTD--K--SVQVQNLAY-PADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKT 279 (494)
Q Consensus 206 ~YTG~~~--~--~~q~q~lA~-S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-~~~ 279 (494)
+|.+... . ....+.+|. +.|. .+. .....+|..+.+ ....--|++ ++ .+|.|||++.+.. ...
T Consensus 141 ~~~~~~~~~g~~~~~~i~~~~l~~d~-----~~~--~g~~~~i~~~~~--~~~~EgP~i-~k-~~G~YYL~~s~gg~~~~ 209 (533)
T 1yif_A 141 LNMLWDHRIDRHSFGGIVIQEYSDKE-----QKL--IGKPKVIFEGTD--RKLTEAPHL-YH-IGNYYYLLTAEGGTRYE 209 (533)
T ss_dssp EEEEECCCTTSCSEEEEEEEEEETTT-----TEE--CSCCEEEECCCT--TCCCEEEEE-EE-ETTEEEEEEEESCSSTT
T ss_pred EEEecccccCCCCCCCEEEEEECCcc-----CCC--CCCcEEEEcCCC--CCccccceE-EE-ECCEEEEEEeCCCCCCC
Confidence 9985321 1 123345553 3442 111 111112222111 123457888 44 5899999987542 111
Q ss_pred eEEEEEEeCCCC-CCEEcC--cccc
Q 011094 280 GISLVYQTTDFK-TYELLD--EYLH 301 (494)
Q Consensus 280 G~v~lY~S~Dl~-~W~~~~--~ll~ 301 (494)
-.+.+++|+++. -|+..+ +++.
T Consensus 210 ~~v~~~rs~s~~GP~~~~~~~pil~ 234 (533)
T 1yif_A 210 HAATIARSANIEGPYEVHPDNPILT 234 (533)
T ss_dssp CEEEEEEESSTTCCCEECTTCCSEE
T ss_pred eEEEEEEECCCCceeeeCCCCceEe
Confidence 256788999875 688864 3554
|
| >3nqh_A Glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.11A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.0003 Score=74.37 Aligned_cols=180 Identities=10% Similarity=0.096 Sum_probs=105.9
Q ss_pred cccccccceeeeecCCC--c-----ccCCccceE--ECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CeeecceeccC
Q 011094 112 AMFTWQRTSFHFQPEKN--W-----MNDPNGPLF--YKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVP 181 (494)
Q Consensus 112 ~~~~w~Rp~~Hf~P~~g--w-----mNDPNG~~y--~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv-hW~~~p~AL~P 181 (494)
++..|+....-|.+... | +-.|. ++| ++|+|||||..+..+ .+....|.|+|++.. .|+++++.+..
T Consensus 60 DLvnW~~~G~aL~~~~~~~~~~~~~~WAP~-V~y~~~dGkYYLyyt~~~~~--~~~~~igVAtSdsP~GPwt~~gpl~~~ 136 (441)
T 3nqh_A 60 DLVNWKFERVVLPMQSSGILGPDRVGERVK-VMKCPSTGEYVMYMHADDMN--YKDPHIGYATCSTIAGEYKLHGPLLYE 136 (441)
T ss_dssp SSSSCEEEEEEECCCSSSTTSTTEEEEEEE-EEECTTTCCEEEEEEEEETT--SCSCEEEEEEESSTTSCCEEEEECEET
T ss_pred CCCCcEECceeeccCCccccCCCCccCCce-eEEEccCCEEEEEEEeCCCC--CCcceEEEEEeCCCCCCceEcceeecC
Confidence 35567655544444322 2 12333 556 489999999876422 235678999999965 79987654433
Q ss_pred CCCcCCCcEEeeeEEEccCCeEEEEEeccCCCccceEEEE-EEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeE
Q 011094 182 DQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLA-YPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA 260 (494)
Q Consensus 182 d~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA-~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~ 260 (494)
+.. .+.+.++++++.||+.+|+|.+. .++ .+.| +.+++.. ++...+ + ...-.|++
T Consensus 137 g~~---~~~IDPsvF~DdDGk~YL~~g~~--------~I~eLs~D-----~~~~~g~---~~~i~~-g---~~~EgP~i- 192 (441)
T 3nqh_A 137 GKP---IRRWDMGTYQDTDGTGYLLLHGG--------IVYRLSKD-----YRTAEEK---VVSGVG-G---SHGESPAM- 192 (441)
T ss_dssp TEE---CCCCSEEEEECTTSCEEEEEGGG--------EEEEECTT-----SSSEEEE---EESCST-T---CCCEEEEE-
T ss_pred CCc---ccccCceEEEeCCCCEEEEeCCC--------cEEEeCCc-----cccccCc---eEEeCC-C---CceECcEE-
Confidence 321 13468889888899999999642 123 3444 3555432 222111 1 23457888
Q ss_pred eecCCCeEEEEEeeecC-CeeEEEEEEeCCCC-CCEEcCcccccCCCCCceEeccEEEecc
Q 011094 261 WAGPDGKWRLTIGSKIG-KTGISLVYQTTDFK-TYELLDEYLHAVPGTGMWECVDFYPVAI 319 (494)
Q Consensus 261 w~~~dg~w~MviGa~~~-~~G~v~lY~S~Dl~-~W~~~~~ll~~~~~~gmwECPdlf~l~~ 319 (494)
++ .+|.|||++..... ....+.+++|+++. -|+..+.++.....+..=-+..+|++.+
T Consensus 193 ~K-~~G~YYL~~S~~~g~~~~~~~~arS~s~~GPw~~~g~i~~~~~~t~~sQ~t~vl~v~G 252 (441)
T 3nqh_A 193 FK-KDGTYFFLFSNLTSWEKNDNFYFTAPSVKGPWTRQGLFAPEGSLTYNSQTTFVFPLKC 252 (441)
T ss_dssp EE-ETTEEEEEEECSCTTSCCCCEEEEESSTTCCCEEEEESSCTTSHHHHCEEEEEEEEEE
T ss_pred EE-ECCEEEEEEeCCCCcCCCceEEEEeCCCCCCceECCccCCCCCccCcCCCceEEEeCC
Confidence 44 68999999876311 11134678999976 7998877653211111223455666653
|
| >1w18_A Levansucrase; transferase, fructosyl transferase, glycosyltransferase; 2.5A {Gluconacetobacter diazotrophicus} | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00033 Score=74.79 Aligned_cols=143 Identities=17% Similarity=0.151 Sum_probs=90.2
Q ss_pred ECCEEEEEEeeCCCCCC-CC------CcEEE------EEEec--CccCeeecceeccCCC-CcC------CCcEEeeeEE
Q 011094 139 YKGWYHLFYQYNPDSAV-WG------NITWG------HAVSA--DLIHWLYLPIAMVPDQ-WYD------INGVWTGSAT 196 (494)
Q Consensus 139 ~~G~YHLFYQ~nP~~~~-wg------~~~WG------HA~S~--DLvhW~~~p~AL~Pd~-~~D------~~Gv~SGSav 196 (494)
.+|+|||||...-.... -| ....+ |+.++ +|.+|+.+.+.+.+|. .|. ....-...++
T Consensus 173 ~dG~i~LFYTg~~~~~~~~g~~~~~~~Q~Ia~a~~~l~a~~dgv~~~~w~k~~~l~~~DG~~Yqt~~q~~~~~fRDP~vf 252 (493)
T 1w18_A 173 HGNTVSVFYTDVAFNRDANANNITPPQAIITQTLGRIHADFNHVWFTGFTAHTPLLQPDGVLYQNGAQNEFFNFRDPFTF 252 (493)
T ss_dssp TSCEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCTTTCTTCCCEEEEEE
T ss_pred CCCEEEEEEEecccccccccccCCcceeEEEEeccceeccCCCccccccccCCceeecCccccccccccCCccccCCEEE
Confidence 58999999975422110 11 13345 33333 3788998888888876 343 2355678887
Q ss_pred Ecc--CCeEEEEEeccCCCc----------------------------------cceEEEEEEcCCCCCCcceEEEcCCC
Q 011094 197 ILP--DGQIVMLYTGSTDKS----------------------------------VQVQNLAYPADPSDPLLLDWVKYPGN 240 (494)
Q Consensus 197 v~~--dG~~~~~YTG~~~~~----------------------------------~q~q~lA~S~D~~d~lL~~W~K~~~n 240 (494)
.++ ||+.+|++.+++... ...++||...+. .|..|+-. .
T Consensus 253 ~D~~~dG~~YmvFeant~~~~g~~~~~~~~~~y~~~~~~~~~~~~~~~~~a~~~~g~IGLa~~~s~---Dl~~We~~--~ 327 (493)
T 1w18_A 253 EDPKHPGVNYMVFEGNTAGQRGVANCTEADLGFRPNDPNAETLQEVLDSGAYYQKANIGLAIATDS---TLSKWKFL--S 327 (493)
T ss_dssp ECTTSTTCEEEEEEEEBSSCTTCCCCCHHHHCCCTTCTTCCCHHHHHHTTGGGCCEEEEEEEESST---TSCCEEEE--E
T ss_pred ecCCCCCCEEEEEEeccCCCCcccccccccccccCCccccchhhhcccccchhccceEEEEEeCCC---CCccceec--C
Confidence 776 499999999876321 235667887643 25789865 5
Q ss_pred ceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-----CC---eeEEEEEEeCCCC
Q 011094 241 PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----GK---TGISLVYQTTDFK 291 (494)
Q Consensus 241 PVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-----~~---~G~v~lY~S~Dl~ 291 (494)
|++..+.. ...+--|.|+ + .+|+|||+..++. .. .| +..|.|+.+.
T Consensus 328 PL~~a~~v--~deiErP~V~-~-~~GkyYLFtSs~~~t~a~~~~G~~g-~yg~VSdsl~ 381 (493)
T 1w18_A 328 PLISANCV--NDQTERPQVY-L-HNGKYYIFTISHRTTFAAGVDGPDG-VYGFVGDGIR 381 (493)
T ss_dssp EEEECTTT--BSCCEEEEEE-E-ETTEEEEEEEECGGGBCTTCCCCSE-EEEEEESSSE
T ss_pred ccccCCCC--CCcEECCeEE-E-ECCEEEEEEEccCccccCCccCCcc-eEEEEeCCCC
Confidence 77775432 2345679995 3 5899999987651 11 23 3456777764
|
| >3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00035 Score=74.29 Aligned_cols=149 Identities=11% Similarity=0.134 Sum_probs=91.3
Q ss_pred cCCccceEE--C--CEEEEEEeeCCCCCCCCCcEEEEEEecCccC-eeec-ce-eccCCC-CcC-CCcEEeeeEEEccCC
Q 011094 131 NDPNGPLFY--K--GWYHLFYQYNPDSAVWGNITWGHAVSADLIH-WLYL-PI-AMVPDQ-WYD-INGVWTGSATILPDG 201 (494)
Q Consensus 131 NDPNG~~y~--~--G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvh-W~~~-p~-AL~Pd~-~~D-~~Gv~SGSavv~~dG 201 (494)
-.|. ++|+ + |+|||||... ....|.|+|+|... |++. +. .+.++. ..+ ....+++++++++||
T Consensus 101 WAP~-v~~~~~~g~g~yylyyt~~-------~~~i~va~s~~p~Gpw~~~~g~pli~~~~~g~~~~~~~iDp~vf~DddG 172 (487)
T 3c7f_A 101 WAPS-IAVKKINGKDKFFLYFANS-------GGGIGVLTADSPIGPWTDPIGKPLVTPSTPGMSGVVWLFDPAVFVDDDG 172 (487)
T ss_dssp EEEE-EEEEEETTEEEEEEEEEST-------TBCEEEEEESSTTCCCBCSSSSCSBCTTSTTCTTCSSBCCCEEEECTTS
T ss_pred cchh-eEEEecCCCCeEEEEEEcC-------CcEEEEEEeCCCCCCcccCCCCeEeecCCCCccCCCCccCCceEEcCCC
Confidence 4465 5665 4 7999999643 14589999999986 9974 32 232221 111 124678999888899
Q ss_pred eEEEEEeccCCC----------ccceEEEE-EEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEE
Q 011094 202 QIVMLYTGSTDK----------SVQVQNLA-YPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRL 270 (494)
Q Consensus 202 ~~~~~YTG~~~~----------~~q~q~lA-~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~M 270 (494)
+.+|+|.+.... ..+...+| .+.| +.+|+... ..+..| ..+-.|.+ ++ .+|+|||
T Consensus 173 ~~Yl~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~d-----~~~~~g~~--~~i~~p-----~~~Egp~i-~k-~~G~YYl 238 (487)
T 3c7f_A 173 TGYLYAGGGVPGVSNPTQGQWANPKTARVIKLGPD-----MTSVVGSA--STIDAP-----FMFEDSGL-HK-YNGTYYY 238 (487)
T ss_dssp CEEEEEECCCSSTTSCCHHHHHCCCCEEEEEECTT-----SSSEEEEE--EEECCT-----TEEEEEEE-EE-ETTEEEE
T ss_pred CEEEEECCcccCccccccccccCCCceEEEEECCC-----eeeccCcc--EEecCC-----ceEecceE-EE-ECCEEEE
Confidence 999999863211 01234454 3444 36776431 122221 12456777 44 6899999
Q ss_pred EEeeec--C-----CeeEEEEEEeCCCC-CCEEcCcccc
Q 011094 271 TIGSKI--G-----KTGISLVYQTTDFK-TYELLDEYLH 301 (494)
Q Consensus 271 viGa~~--~-----~~G~v~lY~S~Dl~-~W~~~~~ll~ 301 (494)
++.+.. . ....+.+++|+++. -|+..++++.
T Consensus 239 ~ys~~~~~t~~~~~~~~~i~~~~S~s~~GP~~~~~~il~ 277 (487)
T 3c7f_A 239 SYCINFGGTHPADKPPGEIGYMTSSSPMGPFTYRGHFLK 277 (487)
T ss_dssp EEEECSSSCCCTTSCTTSEEEEEESSTTCCCEEEEEEEC
T ss_pred EEECCCCCCcccCCCCceeEEEEcCCCCCCceECceecc
Confidence 877542 1 12356788999875 6998876664
|
| >3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00055 Score=72.57 Aligned_cols=147 Identities=19% Similarity=0.212 Sum_probs=86.8
Q ss_pred cCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceec-cCCCCcCCC--cEEeeeEEEccCC
Q 011094 125 PEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM-VPDQWYDIN--GVWTGSATILPDG 201 (494)
Q Consensus 125 P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL-~Pd~~~D~~--Gv~SGSavv~~dG 201 (494)
|...+.-||+ ++.++|+++|||-...... -++...-.+..+|.......+..| .|+..|+.. .+.-|..++..+|
T Consensus 129 ~~~~~~IDp~-vf~ddG~~Yl~~g~~~~~~-~~~~~i~i~~l~~~~~~~g~~~~i~~~~~~we~~g~~~~EGP~i~k~~G 206 (468)
T 3akh_A 129 PVSSFSLDAT-TFVVNGVRHLAWAQRNPAE-DNNTSLFIAKMANPWTISGTPTEISQPTLSWETVGYKVNEGPAVIQHGG 206 (468)
T ss_dssp SSCSCEEEEE-EEEETTEEEEEEEECCTTS-SSSBEEEEEEEEETTEEEEEEEEEECCCSGGGCSSSCBEEEEEEEEETT
T ss_pred CCCCCcCcCe-EEEECCEEEEEEEccCCCC-CCCCcEEEEEeCCCceecCccEEecCCCcccccCCCccccCCEEEEECC
Confidence 3356777998 5558999999996432111 122334456666654443333333 454445443 3778888888899
Q ss_pred eEEEEEeccCCCccceEEEEEEcCCCCCCc-ceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCe-EEEEEeee
Q 011094 202 QIVMLYTGSTDKSVQVQNLAYPADPSDPLL-LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGK-WRLTIGSK 275 (494)
Q Consensus 202 ~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL-~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~-w~MviGa~ 275 (494)
+++|+|.+........+++|+|+..++++. ..|+|. ++||+...+......-.-..+ ...++|+ |+|++-+.
T Consensus 207 ~YYL~ys~~g~~~~y~v~~a~s~~~~~~~gP~~w~~~-~~pvl~~~~~~~~~g~GH~sv-v~~~~G~~~~~vyH~~ 280 (468)
T 3akh_A 207 KVFLTYSASATDANYCLGMLSASASADLLNAASWTKS-SQPVFKTSEATGQYGPGHNSF-TVSEDGKSDILVYHDR 280 (468)
T ss_dssp EEEEEEEESCSSTTCEEEEEEEETTSCTTSGGGCEEC-SSCSBCCBTTTTBEEEEEEEE-EECTTSCSEEEEEEEE
T ss_pred EEEEEEEeCCCCCCceEEEEEECCCCCCCCcHHhccC-CceEEEeCCCCceEeCCCceE-EECCCCCEEEEEEecc
Confidence 999999976533334678888874333322 369987 689997532100000011233 4456785 99887654
|
| >2exh_A Beta-D-xylosidase; glykosidase, hydrolsase, family43, hydrolase; HET: MES; 1.88A {Geobacillus stearothermophilus} SCOP: b.29.1.23 b.67.2.1 PDB: 2exi_A* 2exj_A* 2exk_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.001 Score=71.45 Aligned_cols=154 Identities=13% Similarity=0.111 Sum_probs=91.5
Q ss_pred CcccCCccceEECCEEEEEEeeCCC-CCCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEE
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPD-SAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVM 205 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~-~~~wg~~~WGHA~S~DLv-hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~ 205 (494)
+-+--|. ++|++|+|+|||..... ...+.....+.|+|+|.. .|++ |+.+. ...+.+++++++||+.+|
T Consensus 71 ~~~WAP~-i~~~~g~~ylyyt~~~~~~g~~~~~~~~va~s~~~~Gpw~~-p~~~~-------~~~iDp~vf~DddG~~Yl 141 (535)
T 2exh_A 71 GGVWAPH-LSYSDGKFWLIYTDVKVVEGQWKDGHNYLVTCDTIDGAWSD-PIYLN-------SSGFDPSLFHDEDGRKYL 141 (535)
T ss_dssp CBBCSCE-EEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTSCCCC-CEECC-------CSCSCCEEEECTTSCEEE
T ss_pred CCEECCe-EEEECCEEEEEEEeccCCCCCccccceEEEEeCCCCCCccc-cEecC-------CCcCCCceEECCCCCEEE
Confidence 4456786 78899999999985422 122234567899999976 5986 43331 134678888878999999
Q ss_pred EEeccCC--Cc--cceEEEEE-EcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCee
Q 011094 206 LYTGSTD--KS--VQVQNLAY-PADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTG 280 (494)
Q Consensus 206 ~YTG~~~--~~--~q~q~lA~-S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G 280 (494)
+|..... .. ...+.++. +.|. .+-.. +...|+. +.+ ....--|++ ++ .+|.|||++.+.....+
T Consensus 142 ~~~~~~~~~~~~~~~~i~~~~l~~d~-----~~~~g-~~~~i~~-~~~--~~~~EgP~i-~k-~~G~YYL~~s~ggt~~~ 210 (535)
T 2exh_A 142 VNMYWDHRVDHHPFYGIVLQEYSVEQ-----KKLVG-EPKIIFK-GTD--LRITEGPHL-YK-INGYYYLLTAEGGTRYN 210 (535)
T ss_dssp EEEEECCCTTSCSEEEEEEEEEETTT-----TEEEE-EEEEEEC-CCT--TCCCEEEEE-EE-ETTEEEEEEEESCSSTT
T ss_pred EEEecCCccCCCCCCcEEEEEECCcc-----CCCCC-CcEEEEc-CCC--CCccccceE-EE-ECCEEEEEEeCCCCCCC
Confidence 9874321 11 13344554 3332 11111 0122332 211 123457888 44 58999999876421112
Q ss_pred -EEEEEEeCCCC-CCEEcC--cccc
Q 011094 281 -ISLVYQTTDFK-TYELLD--EYLH 301 (494)
Q Consensus 281 -~v~lY~S~Dl~-~W~~~~--~ll~ 301 (494)
.+.+++|+++. -|+..+ +++.
T Consensus 211 ~~~~~~rs~s~~GP~~~~~~~pil~ 235 (535)
T 2exh_A 211 HAATIARSTSLYGPYEVHPDNPLLT 235 (535)
T ss_dssp CEEEEEEESSTTCCCEECTTCCSEE
T ss_pred eEEEEEEeCCCCCCCccCCCcceEe
Confidence 56788999975 688764 3554
|
| >2x8s_A Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; 1.50A {Bacillus subtilis} PDB: 2x8f_A 2x8t_A 3lv4_A | Back alignment and structure |
|---|
Probab=97.56 E-value=0.0015 Score=69.58 Aligned_cols=153 Identities=15% Similarity=0.100 Sum_probs=90.2
Q ss_pred cccCCccceE-ECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CeeecceeccCC--------CCcC---CCcEEeeeE
Q 011094 129 WMNDPNGPLF-YKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPD--------QWYD---INGVWTGSA 195 (494)
Q Consensus 129 wmNDPNG~~y-~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLv-hW~~~p~AL~Pd--------~~~D---~~Gv~SGSa 195 (494)
-+-.|. +++ ++|+|||||..+..+. +....|+|+|+|.. .|++.+..|... ..|+ ......+++
T Consensus 98 ~~WAP~-vi~~~dGkyylyys~~~~~~--~~~~IgvatSddp~GPw~~~g~~l~~~~~~~~~dg~~~~~~~~~~~IDp~v 174 (470)
T 2x8s_A 98 TLWAAD-VTQLADGKYYMYYNACRGDS--PRSAMGVAVADNIEGPYKNKGIFLKSGMEGTSSDGTPYDATKHPNVVAPHT 174 (470)
T ss_dssp SCCCCE-EEECTTSCEEEEEEEECSSS--CCEEEEEEEESSTTCCCEEEEEEEEECCSSBCTTSSBCCTTTSCCSCCCEE
T ss_pred ceECCe-EEEecCCEEEEEEEeccCCC--CccEEEEEEeCCCCCCceeCCeeeccCcccccccccccccccCCCCCCCCE
Confidence 455776 566 4899999998764321 24578999999998 599987555431 1232 235678999
Q ss_pred EEccCCeEEEEEeccCCCccceEEEEEE-cCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEee
Q 011094 196 TILPDGQIVMLYTGSTDKSVQVQNLAYP-ADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (494)
Q Consensus 196 vv~~dG~~~~~YTG~~~~~~q~q~lA~S-~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa 274 (494)
++++||+.+|+|.+... .+.++.- .|.+.+ ..+... +..+... .....--|+++.++.+|.|||++.+
T Consensus 175 f~DdDG~~Yl~~g~~~~----gI~~~eL~~d~~~~--~~~~~~-~~~i~~g----~~~~~EGP~i~~~K~~G~YYL~~S~ 243 (470)
T 2x8s_A 175 FFDKDGKLWMVYGSYSG----GIFILEMNPKTGFP--LPGQGY-GKKLLGG----NHSRIEGPYVLYNPDTQYYYLYLSY 243 (470)
T ss_dssp EECTTSCEEEEECBSTT----CEEEEEBCTTTSSB--CTTCTT-CEEEECC----SSCSEEEEEEEEETTTTEEEEEEEE
T ss_pred EEcCCCCEEEEeeecCC----cEEEEEECCccCcC--cCCccc-ceEecCC----CCCceeccEEEEEccCCEEEEEEEe
Confidence 88889999999976431 2344432 222111 111000 0112111 0112346888433568999999875
Q ss_pred ec-C--CeeEEEEEEeCCCC-CCEE
Q 011094 275 KI-G--KTGISLVYQTTDFK-TYEL 295 (494)
Q Consensus 275 ~~-~--~~G~v~lY~S~Dl~-~W~~ 295 (494)
.. . ..=.+.+++|+++. -|+.
T Consensus 244 g~~~~~~~y~v~~arS~s~~GP~~~ 268 (470)
T 2x8s_A 244 GGLDATGGYNIRVARSKKPDGPYYD 268 (470)
T ss_dssp SBSSTTSBCEEEEEEESSTTCCCBC
T ss_pred CCCCCCCCceEEEEEECCCCCCCCc
Confidence 42 1 12257788999875 5763
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0045 Score=65.50 Aligned_cols=143 Identities=16% Similarity=0.193 Sum_probs=90.3
Q ss_pred ECCEEEEEEeeCCCCCCCCCcEEEEEE-----ecC---ccCeeecceeccCCC-Cc---C------------CCcEEeee
Q 011094 139 YKGWYHLFYQYNPDSAVWGNITWGHAV-----SAD---LIHWLYLPIAMVPDQ-WY---D------------INGVWTGS 194 (494)
Q Consensus 139 ~~G~YHLFYQ~nP~~~~wg~~~WGHA~-----S~D---LvhW~~~p~AL~Pd~-~~---D------------~~Gv~SGS 194 (494)
.+|++||||.-+-... -.....++|+ |+| +..|+...+.+.++. .| + ....-..-
T Consensus 145 ~dG~i~LfYTg~~~~~-~~~q~I~~a~~~l~~~~dgv~~~~~~~~~~l~~~Dg~~Yq~~~q~~~~~~~~~~~~~~fRDP~ 223 (447)
T 1oyg_A 145 SDGKIRLFYTDFSGKH-YGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPH 223 (447)
T ss_dssp TTSCEEEEEEEEEGGG-TTEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCCEEEE
T ss_pred cCCEEEEEEEeecCCC-CCceEEEEEecceeecCCCcceecccCCCceEcCCCccccccccccccccccCCCccccCCCe
Confidence 5899999998643221 1124567777 678 556776777788875 23 1 23455677
Q ss_pred EEEccCCeEEEEEeccCCCc-----------------------------------------cceEEEEE-EcCCCCCCcc
Q 011094 195 ATILPDGQIVMLYTGSTDKS-----------------------------------------VQVQNLAY-PADPSDPLLL 232 (494)
Q Consensus 195 avv~~dG~~~~~YTG~~~~~-----------------------------------------~q~q~lA~-S~D~~d~lL~ 232 (494)
++. .+|+++|++.+++... .-.+.|++ |.| +.
T Consensus 224 Vf~-d~G~~ymvfgA~t~~~~g~~~~~~l~~w~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~G~Igl~~~s~D-----l~ 297 (447)
T 1oyg_A 224 YVE-DKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDD-----YT 297 (447)
T ss_dssp EEE-ETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTT-----SS
T ss_pred EEe-ECCEEEEEEeeecCCCCcccchhhhcchhhcccCcccchhhhhhcccccccccchhcCcEEEEEEcCCC-----CC
Confidence 654 5899999998876431 12455664 555 47
Q ss_pred eEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecC--------CeeE-EEEEEeCCCC-CCE
Q 011094 233 DWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG--------KTGI-SLVYQTTDFK-TYE 294 (494)
Q Consensus 233 ~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~--------~~G~-v~lY~S~Dl~-~W~ 294 (494)
.|+-. .|++.+. +. ...+-.|.++ + .+|+|||++..+.. ..++ ++.|+|+.+. -|+
T Consensus 298 ~W~~~--~pL~~~~-~v-~d~~EcPdlf-k-~dGkyyLf~S~~~s~~~~~g~~~~~vy~~g~vsdsl~GPy~ 363 (447)
T 1oyg_A 298 LKKVM--KPLIASN-TV-TDEIERANVF-K-MNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYK 363 (447)
T ss_dssp EEEEE--EEEEECT-TT-CSCCEEEEEE-E-ETTEEEEEEEEEGGGCCCTTCCTTCEEEEEEEESSTTCCCE
T ss_pred CceEc--cccccCC-CC-CCceEcCcEE-E-ECCEEEEEEecCCCcccccCcCCCcEEEEEEEcCCCCCCCe
Confidence 89875 5777643 21 2346789994 3 68999999886521 1133 4467898874 354
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0012 Score=71.20 Aligned_cols=155 Identities=12% Similarity=0.080 Sum_probs=93.9
Q ss_pred cCCccccccccceeeeecCCCcccCCccc-----eE-ECCEEEEEEeeCCCC---C-CCC-CcEEEEEEecCc--cCeee
Q 011094 108 NWTNAMFTWQRTSFHFQPEKNWMNDPNGP-----LF-YKGWYHLFYQYNPDS---A-VWG-NITWGHAVSADL--IHWLY 174 (494)
Q Consensus 108 ~~~~~~~~w~Rp~~Hf~P~~gwmNDPNG~-----~y-~~G~YHLFYQ~nP~~---~-~wg-~~~WGHA~S~DL--vhW~~ 174 (494)
.-+.++..|++-.--+.|.. ..|.+|. +. .+|+++|||.-+-.. . ..+ ...-++|+|+|. ++|+.
T Consensus 86 a~S~DLvhW~~~~~aL~P~~--~~d~~g~~SGSav~~~dg~~~l~YTg~~~~~~~~~~~~~~q~q~lA~S~D~gl~~w~K 163 (526)
T 3pij_A 86 VSSTDMLNWKREPIMFAPSL--EQEKDGVFSGSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQMTALPDNDELTSATK 163 (526)
T ss_dssp EEESSSSSEEECCCCBCCCB--GGGTTEEEEEEEEECTTSCEEEEEEEEEETTSSSGGGCEEEEEEEEEESSTTCSCEEE
T ss_pred EEeCCCCCceeCeeccCCCC--ccccCCeEeceEEEccCCEEEEEEecccCcccccCCCCceeEEEEEEECCCCcceEEE
Confidence 33556677876555566654 2466653 23 368999999854211 0 111 146789999997 89998
Q ss_pred cceeccCCCCcCCCcEEeeeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCC
Q 011094 175 LPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDF 254 (494)
Q Consensus 175 ~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~f 254 (494)
.+++|...........-+..+.. .+|+++|++.+...+..-.+.+..|.|+ ++|+.. .+++..+.. ....|
T Consensus 164 ~~pvi~~P~~~~~~~fRDP~V~~-~~g~w~mv~ga~~~~~~G~i~ly~S~Dl-----~~W~~~--g~l~~~~~~-~g~mw 234 (526)
T 3pij_A 164 QGMIIDCPTDKVDHHYRDPKVWK-TGDTWYMTFGVSSADKRGQMWLFSSKDM-----VRWEYE--RVLFQHPDP-DVFML 234 (526)
T ss_dssp EEEEECCCGGGEEEEEEEEEEEE-ETTEEEEEEEEEETTSCEEEEEEEESSS-----SSCEEE--EEEEECSCT-TCCEE
T ss_pred CCccccCCCCccccccccCEEEE-ECCEEEEEEEEecCCCCcEEEEEECCCC-----CcceEc--CcccccCCC-ccCeE
Confidence 87655321111122345666653 7899999987544333345678889884 899986 454433321 12356
Q ss_pred CCCeeEeecCCC-----eEEEEEeee
Q 011094 255 RDPTTAWAGPDG-----KWRLTIGSK 275 (494)
Q Consensus 255 RDP~V~w~~~dg-----~w~MviGa~ 275 (494)
-.|-.+ . -+| +|+|+++..
T Consensus 235 ECPdlf-~-l~~~~g~~k~vL~~s~~ 258 (526)
T 3pij_A 235 ECPDFS-P-IKDKDGNEKWVIGFSAM 258 (526)
T ss_dssp EEEEEE-E-EECTTSCEEEEEEEEEE
T ss_pred ECCEEE-E-ECCCCCceeEEEEEecc
Confidence 677773 3 234 889987643
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* | Back alignment and structure |
|---|
Probab=97.03 E-value=0.012 Score=63.75 Aligned_cols=130 Identities=16% Similarity=0.172 Sum_probs=82.5
Q ss_pred ECCEEEEEEeeCCCCCC-CCCcEEEEEE-------ecC---ccCeeecceeccCCC-Cc-------------CCCcEEee
Q 011094 139 YKGWYHLFYQYNPDSAV-WGNITWGHAV-------SAD---LIHWLYLPIAMVPDQ-WY-------------DINGVWTG 193 (494)
Q Consensus 139 ~~G~YHLFYQ~nP~~~~-wg~~~WGHA~-------S~D---LvhW~~~p~AL~Pd~-~~-------------D~~Gv~SG 193 (494)
.+|++||||..+-.... ......+.+. |+| +..|+..++.+.++. .| +....-..
T Consensus 204 ~DG~l~LFYTG~~~~~~~~~~Q~Ia~a~~~l~~~~s~dgv~~~kw~~~~~l~~~dg~~Yqt~~q~~~~~~~~~~~~FRDP 283 (571)
T 2yfr_A 204 KDGSIQLYYTKVDTSDNNTNHQKLASATVYLNLEKDQDKISIAHVDNDHIVFEGDGYHYQTYDQWKETNKGADNIAMRDA 283 (571)
T ss_dssp TTSCEEEEEEEEECTTTTCCEEEEEEEEEEEEEEGGGTEEEEEEEEEEEEEECCCSSSBCCHHHHHHHCSSCCCCCCEEE
T ss_pred cCCEEEEEEeccccCCCCcccceEEEEEeeeeecccCCCcceecccCCCceecCCCcccccccccccccccCCcccCcCC
Confidence 58999999987543221 1123344432 467 556766777777765 33 34455677
Q ss_pred eEEEccCCeEEEEEeccCCCc-----------------------------------------cceEEEEEEcCCCCCCcc
Q 011094 194 SATILPDGQIVMLYTGSTDKS-----------------------------------------VQVQNLAYPADPSDPLLL 232 (494)
Q Consensus 194 Savv~~dG~~~~~YTG~~~~~-----------------------------------------~q~q~lA~S~D~~d~lL~ 232 (494)
.++.+++|+++|++.+.+... .-.+.|+.|.|.. ..+.
T Consensus 284 ~Vf~d~dG~~YMVfgA~t~~~~~~G~~~ly~w~~yg~~~~f~~~~~~~v~~~~~~~~~a~~~~G~IgL~~s~dl~-~n~~ 362 (571)
T 2yfr_A 284 HVIDDDNGNRYLVFEASTGTENYQGDDQIYQWLNYGGTNKDNLGDFFQILSNSDIKDRAKWSNAAIGIIKLNDDV-KNPS 362 (571)
T ss_dssp EEEECTTCCEEEEEEEEBCTTSCCSGGGGGBGGGTCSCHHHHHHHHHHHHHCHHHHHHHHHCCEEEEEEEECSCT-TSCC
T ss_pred eEEEeCCCCEEEEEEeccCCCCcccchhhccccccccccccchhhhccccccccccccchhccceEEEEEcCCCc-CCcc
Confidence 776644699999998875431 2467888887642 1236
Q ss_pred eEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeee
Q 011094 233 DWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (494)
Q Consensus 233 ~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~ 275 (494)
.|+-. .|++.... . ...+--|.++ + .+|+|||++.++
T Consensus 363 ~We~~--~pL~~~~~-v-~dm~EcP~lf-~-~dG~yyL~~S~q 399 (571)
T 2yfr_A 363 VAKVY--SPLISAPM-V-SDEIERPDVV-K-LGNKYYLFAATR 399 (571)
T ss_dssp EEEEC--CCSEECTT-T-BSCCEEEEEE-E-ETTEEEEEEEEE
T ss_pred cceec--cccccCCC-c-CceeecCcEE-E-ECCEEEEEEeCC
Confidence 89854 56765432 1 2356789884 3 689999998765
|
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0051 Score=66.57 Aligned_cols=117 Identities=16% Similarity=0.239 Sum_probs=78.1
Q ss_pred CCccccccccceeeeecCCCcccCCccc-----eEE-CCEEEEEEee-CCCCCCCCCcEEEEEEecCc-----cCeeec-
Q 011094 109 WTNAMFTWQRTSFHFQPEKNWMNDPNGP-----LFY-KGWYHLFYQY-NPDSAVWGNITWGHAVSADL-----IHWLYL- 175 (494)
Q Consensus 109 ~~~~~~~w~Rp~~Hf~P~~gwmNDPNG~-----~y~-~G~YHLFYQ~-nP~~~~wg~~~WGHA~S~DL-----vhW~~~- 175 (494)
-+..+..|++..-=+.|.. + .|-+|. +.. +|+++|||.- +.. +...-+.|+|+|. +||+..
T Consensus 56 ~S~Dlv~W~~~~~aL~P~~-~-~D~~Gv~SGsav~~~dg~~~l~YTg~~~~----~~q~q~lA~s~D~~d~~l~~w~k~~ 129 (543)
T 1st8_A 56 VSYDLVNWIHLDPAIYPTQ-E-ADSKSCWSGSATILPGNIPAMLYTGSDSK----SRQVQDLAWPKNLSDPFLREWVKHP 129 (543)
T ss_dssp EESSSSSEEECCCSBCCCS-G-GGTTEEEEEEEEEETTTEEEEEEEEECTT----SCEEEEEEEESCTTCTTCCCEEECT
T ss_pred ECCCccceEECCeeccCCC-c-cccCCEEcceEEEeeCCEEEEEEEEeCCC----CcEEEEEEEECCCCCCCcceeEEcC
Confidence 3445667765555555643 2 365554 334 8999999986 542 2456799999985 999986
Q ss_pred -ceeccCCCCcCCCcEEeeeEEEc-cCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEc
Q 011094 176 -PIAMVPDQWYDINGVWTGSATIL-PDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKY 237 (494)
Q Consensus 176 -p~AL~Pd~~~D~~Gv~SGSavv~-~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~ 237 (494)
.++|.+...+....+-...++.. ++|+++|++.+..+ ..-...++.|+|+ ++|+..
T Consensus 130 ~nPVi~~~~g~~~~~fRDP~vvw~~~~g~w~mv~ga~~~-~~G~i~ly~S~Dl-----~~W~~~ 187 (543)
T 1st8_A 130 KNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRD-NNGMAFLYQSTDF-----VNWKRY 187 (543)
T ss_dssp TCCSBCCCTTCCTTSEECCCCCEECTTSCEEEEEEEEET-TEEEEEEEEESSS-----SSCEEC
T ss_pred CCcEEeCCCCCCcCccCCCeEEEECCCCcEEEEEEEecC-CceEEEEEECCCC-----CCcEEC
Confidence 35666554444556667774443 68999999976542 2234668888884 899986
|
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0061 Score=66.06 Aligned_cols=137 Identities=14% Similarity=0.205 Sum_probs=86.7
Q ss_pred EecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEeccCCC---ccceEEEEEEcCCCCCCcceEEEcCCCc
Q 011094 165 VSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK---SVQVQNLAYPADPSDPLLLDWVKYPGNP 241 (494)
Q Consensus 165 ~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~---~~q~q~lA~S~D~~d~lL~~W~K~~~nP 241 (494)
-|.++++|.+...-+.|...| +-....++-.+|+++|||.-+-.. +...-+.|+|+|+ +||+..+ +
T Consensus 10 ~~~~~~~~~Rp~yH~~P~~gw----mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHa~S~DL-----vhW~~~p--~ 78 (546)
T 3ugf_A 10 WSNAQLSWQRTAFHFQPERSW----MSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRDL-----IHWLYLP--L 78 (546)
T ss_dssp CCHHHHHHTSCSSSCCCSSEE----EEEEEEEEEETTEEEEEEEEESSCSSSCSCEEEEEEESSS-----SSCEECC--C
T ss_pred cchhhhhhcCCeEEEeCCCCC----ccCCceeEEECCEEEEEEecCCCCCCCCCcEEEEEEcCCc-----CccccCC--C
Confidence 366888998877777776532 123332334689999999855322 2356789999995 9999873 6
Q ss_pred eecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecC-CeeEEEEEEeCCC-----CCCEEcC--cccccCCCC--CceEe
Q 011094 242 VLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG-KTGISLVYQTTDF-----KTYELLD--EYLHAVPGT--GMWEC 311 (494)
Q Consensus 242 Vi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~-~~G~v~lY~S~Dl-----~~W~~~~--~ll~~~~~~--gmwEC 311 (494)
+|.|...++....-.+.++- ..+|+++|++.+... ..-...+..|+|. .+|+..+ +++...++. .-+.-
T Consensus 79 AL~P~~~~D~~G~~SGSavv-~~dg~~~l~YTg~~~~~~q~q~lA~S~D~~d~~l~~w~K~~~nPVi~~p~g~~~~~fRD 157 (546)
T 3ugf_A 79 ALAADQWYDMQGVFSGSATC-LPDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKYPGNPILSAPPGVSPTEFRD 157 (546)
T ss_dssp CBCSCSGGGTTCEEEEEEEE-CTTSCEEEEEEEECTTCCEEEEEEEESCTTCTTCCCEEECTTCCCBCCCTTSCTTSCCC
T ss_pred CCCCCcccccCCcCcceEEE-eeCCeEEEEEEeccCCCcEEEEEEEECCCCCCccceeEEcCCCceEeCCCCCCcceeec
Confidence 66654333333334555522 468999999876532 2334567888885 8999853 555433332 24666
Q ss_pred cc
Q 011094 312 VD 313 (494)
Q Consensus 312 Pd 313 (494)
|.
T Consensus 158 Pk 159 (546)
T 3ugf_A 158 AS 159 (546)
T ss_dssp BC
T ss_pred cc
Confidence 76
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0058 Score=66.09 Aligned_cols=118 Identities=18% Similarity=0.237 Sum_probs=78.4
Q ss_pred cCCccccccccceeeeecCCCcccCCccc-----eEE-CCEEEEEEee-CCCCCCCCCcEEEEEEecCc-----cCeeec
Q 011094 108 NWTNAMFTWQRTSFHFQPEKNWMNDPNGP-----LFY-KGWYHLFYQY-NPDSAVWGNITWGHAVSADL-----IHWLYL 175 (494)
Q Consensus 108 ~~~~~~~~w~Rp~~Hf~P~~gwmNDPNG~-----~y~-~G~YHLFYQ~-nP~~~~wg~~~WGHA~S~DL-----vhW~~~ 175 (494)
.-+..+..|++..-=+.|... .|-+|. +.. +|+++|||.- +.. +...-+.|+|+|. +||+..
T Consensus 55 a~S~Dlv~W~~~~~aL~P~~~--~D~~G~~SGsav~~~dg~~~l~YTg~~~~----~~~~q~lA~s~D~~d~~l~~w~k~ 128 (541)
T 2ac1_A 55 STSTDLINWDPHPPAIFPSAP--FDINGCWSGSATILPNGKPVILYTGIDPK----NQQVQNIAEPKNLSDPYLREWKKS 128 (541)
T ss_dssp EEESSSSSBEEEEEEECCCSG--GGTTCEEEEEEEECTTSCEEEEEEEECTT----SCEEEEEEEESCTTCTTCCCEEEC
T ss_pred EECCCccceEECceeecCCCc--cccCCEEcceEEEeeCCEEEEEEEEeCCC----CcEEEEEEEECCCCCCCceeEEec
Confidence 335556778666665666542 355443 333 8999999986 432 2456799999985 899986
Q ss_pred c--eeccCC--CCcCCCcEEeeeEEEc-cCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEc
Q 011094 176 P--IAMVPD--QWYDINGVWTGSATIL-PDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKY 237 (494)
Q Consensus 176 p--~AL~Pd--~~~D~~Gv~SGSavv~-~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~ 237 (494)
+ ++|.+. ..+....+-...++.. ++|+++|++.+..+ ..-...++.|+|+ ++|++.
T Consensus 129 ~~nPVi~~~~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~-~~G~i~ly~S~Dl-----~~W~~~ 189 (541)
T 2ac1_A 129 PLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIH-RRGLAITYTSKDF-----LKWEKS 189 (541)
T ss_dssp TTCCSBCCCTTTCCCTTSEECCCCCEECTTSCEEEEEEEEET-TEEEEEEEEESSS-----SSCEEC
T ss_pred CCCcEEcCCCCCCCCCCceECCeEEeEeCCCeEEEEEEEecC-CceEEEEEECCCC-----CCcEEc
Confidence 3 566555 3344456667774433 48999999976543 2234678888884 899986
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A | Back alignment and structure |
|---|
Probab=96.52 E-value=0.016 Score=62.03 Aligned_cols=150 Identities=11% Similarity=0.001 Sum_probs=89.0
Q ss_pred CCccccccccceeeeecCC-CcccCCccceEE-CC-------EEEEEEeeCCCCCCCCCcEEEEEEecC-ccCeeecc-e
Q 011094 109 WTNAMFTWQRTSFHFQPEK-NWMNDPNGPLFY-KG-------WYHLFYQYNPDSAVWGNITWGHAVSAD-LIHWLYLP-I 177 (494)
Q Consensus 109 ~~~~~~~w~Rp~~Hf~P~~-gwmNDPNG~~y~-~G-------~YHLFYQ~nP~~~~wg~~~WGHA~S~D-LvhW~~~p-~ 177 (494)
-+..++.|++..-=+.|.. +-+-... .+.. +| .++|||.-+-.. ..+...-++|+|+| ++||+..+ +
T Consensus 46 ~S~DLvhW~~~~~aL~P~~~~g~~SGS-av~~~~~~~g~~~~~~~l~YTg~~~~-~~~~q~q~lA~S~D~g~~w~k~~nP 123 (492)
T 4ffh_A 46 STTDGVAFTHHGTVMPLRPDFPVWSGS-AVVDTANTAGFGAGAVVALATQPTDG-VRKYQEQYLYWSTDGGFTFTALPDP 123 (492)
T ss_dssp EESSSSSCEEEEEEECCBTTBCCCCEE-EEEETTCSSSSCTTEEEEEEEEEGGG-CGGGEEEEEEEESSSSSSCEECSSC
T ss_pred EeCCCCccEECCCCCCCCCCCCEEece-EEEeCCCccccCCCcEEEEEeecccC-CCCcEEEEEEEeCCCCceEEEcCcc
Confidence 3556778876555566632 1111122 2333 34 599999865321 12346789999999 78999874 4
Q ss_pred eccCCCCcCCCc---------EEeeeEEEc-cCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCC
Q 011094 178 AMVPDQWYDING---------VWTGSATIL-PDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR 247 (494)
Q Consensus 178 AL~Pd~~~D~~G---------v~SGSavv~-~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~ 247 (494)
+|.+....+..+ .-+..+... ++|+++|+. +.. ..+.+..|+|+ ++|+.. .++...
T Consensus 124 vi~~p~~~~~~~~~~~~~~~~fRDP~V~~~~~~g~w~mv~-a~~----~~i~ly~S~DL-----~~W~~~--~~~~~~-- 189 (492)
T 4ffh_A 124 VIVNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVI-GRL----RYAAFYTSPNL-----RDWTLR--RNFDYP-- 189 (492)
T ss_dssp SBCCTTTTTCCSHHHHHHHTCEEEEEEEEETTTTEEEEEE-EET----TEEEEEEESSS-----SSCEEC--CCEECS--
T ss_pred ccCCCCccccccccccccCCCCcCCEEEEECCCCEEEEEE-ECC----CeEEEEECCCC-----CCceEe--cccccc--
Confidence 454322122112 678887654 578999998 321 36778889884 899986 344432
Q ss_pred CCCCCCCCCCeeEeec-C--CCeEEEEEee
Q 011094 248 HIGPKDFRDPTTAWAG-P--DGKWRLTIGS 274 (494)
Q Consensus 248 g~~~~~fRDP~V~w~~-~--dg~w~MviGa 274 (494)
+-....|-.|-.+--. + +++|+|+++.
T Consensus 190 ~~~g~mwECPdlf~l~~~~~~~k~vL~~s~ 219 (492)
T 4ffh_A 190 NHALGGIECPDLFEITADDGTRHWVLAASM 219 (492)
T ss_dssp CGGGCCCEEEEEEEEECTTSCEEEEEEEEC
T ss_pred CCccceEECCeEEEECCCCCCceEEEEEcc
Confidence 1112356778773211 1 2589998874
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* | Back alignment and structure |
|---|
Probab=96.39 E-value=0.019 Score=61.73 Aligned_cols=152 Identities=11% Similarity=0.041 Sum_probs=90.6
Q ss_pred CcCCccccccccceeee----ecCCCcccCCccc-----eEECC-----------EEEEEEeeC-CCCC--------CCC
Q 011094 107 YNWTNAMFTWQRTSFHF----QPEKNWMNDPNGP-----LFYKG-----------WYHLFYQYN-PDSA--------VWG 157 (494)
Q Consensus 107 ~~~~~~~~~w~Rp~~Hf----~P~~gwmNDPNG~-----~y~~G-----------~YHLFYQ~n-P~~~--------~wg 157 (494)
+.-+..++.|++-..=+ .|. .|.+|. +..++ +++|||.-+ +... ..+
T Consensus 53 Ha~S~Dlv~W~~~~~al~~~g~P~----~d~~g~~SGsav~~~~~~~g~~~~~~~~~~l~YTg~~~~~~~~~~~~~~~~~ 128 (518)
T 1y4w_A 53 HAISEDLTHWEEKPVALLARGFGS----DVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQED 128 (518)
T ss_dssp EEEESSSSSCEEEEEEECCBTTTS----CCCBEEEEEEEEECTTCTTSCCCSSSCCEEEEEEEEESSCEECTTSCEECTT
T ss_pred EEEeCCCccEEECCceEecCCCCC----CCCCceEeeeEEEcCCCccccccCCCccEEEEEeeeeccccccccccccccc
Confidence 44466677886655555 442 244442 23333 899999754 2210 012
Q ss_pred CcEEEEEEecC-ccCeeec---ceeccCCC-Cc--CCCcEEeeeEEEc-cCCeEEEEEe-ccCCCccceEEEEEEcCCCC
Q 011094 158 NITWGHAVSAD-LIHWLYL---PIAMVPDQ-WY--DINGVWTGSATIL-PDGQIVMLYT-GSTDKSVQVQNLAYPADPSD 228 (494)
Q Consensus 158 ~~~WGHA~S~D-LvhW~~~---p~AL~Pd~-~~--D~~Gv~SGSavv~-~dG~~~~~YT-G~~~~~~q~q~lA~S~D~~d 228 (494)
...-+.|+|+| ++||+.. .++|.+.. .| ...++-...++.. ++|+++|+++ |.. ..+.++.|+|+
T Consensus 129 ~q~q~lA~s~D~g~~w~k~~~~~pvi~~~~~~y~~~~~~fRDP~V~~~~~~g~w~mv~~~g~~----~~i~ly~S~DL-- 202 (518)
T 1y4w_A 129 QQSQSIAYSLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQKWVVVTSIAEL----HKLAIYTSDNL-- 202 (518)
T ss_dssp EEEEEEEEESSTTSSCEECTTTCCSBCSCCTTCGGGTTSEEEEEEEEETTTTEEEEEEEEGGG----TEEEEEEESSS--
T ss_pred eeEEEEEEEcCCCceEEEcCCCCCeEecCCcccccCCCCcCCCcEeEECCCCcEEEEEEecCC----CeEEEEECCCC--
Confidence 35778999999 9999987 35565433 22 3456778887654 3699999864 321 24778888884
Q ss_pred CCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecC----CCeEEEEEeee
Q 011094 229 PLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGP----DGKWRLTIGSK 275 (494)
Q Consensus 229 ~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~----dg~w~MviGa~ 275 (494)
++|+.. .++....+ ....|-.|-++-... +++|+|+++..
T Consensus 203 ---~~W~~~--~~~~~~~~--~~~mwECPdlf~l~~~g~~~~k~vL~~s~~ 246 (518)
T 1y4w_A 203 ---KDWKLV--SEFGPYNA--QGGVWECPGLVKLPLDSGNSTKWVITSGLN 246 (518)
T ss_dssp ---SSCEEE--EEECCCSC--CSSEEEEEEEEEEEBTTSSCEEEEEEEEEE
T ss_pred ---CCCeEC--ccccccCC--CCCeEECCeEEEeecCCCCceeEEEEeccC
Confidence 899976 33432111 112456677732211 35899988754
|
| >2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A | Back alignment and structure |
|---|
Probab=96.37 E-value=0.091 Score=54.00 Aligned_cols=118 Identities=17% Similarity=0.211 Sum_probs=71.4
Q ss_pred CeeecceeccCCCCc-CCCcEEeeeEEEccCCeEEEEEeccCCC-ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCC
Q 011094 171 HWLYLPIAMVPDQWY-DINGVWTGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRH 248 (494)
Q Consensus 171 hW~~~p~AL~Pd~~~-D~~Gv~SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g 248 (494)
.|+...+. .|...| +...+| ++++..+||.+++.|+....+ ......+..|+|++ ++|++.. .|.....+
T Consensus 10 ~~~~~~if-~~~~~~~~~~~~y-p~~v~L~dG~LLa~~~~~~~~~~~~~~~v~rS~DgG----~TW~~~~--~v~~~~~g 81 (367)
T 2ydt_A 10 TFSNVEIF-DPPTNYRDPQVLY-ARPLELSDGTLLGTWENYSPEPPNVWFPIVKSKDGG----KTWKEIS--KVKDTQNN 81 (367)
T ss_dssp CEEEEEEE-CCCTTSCTTSEEE-EEEEECTTSCEEEEEEECCCSSSCCCEEEEEESSTT----SSCEEEE--EECCCSSS
T ss_pred cccceeEe-cCCcccCCCCCCc-eeEEEcCCCCEEEEEEeccCCCCCeEEEEEEECCCC----cCcCcCc--ccCCCCCC
Confidence 35443333 343334 455677 777788999999999876542 33456788999986 9999862 22221111
Q ss_pred CCCCCCC-CCeeEeecC-------CCeEEEEEeee-cC-CeeEEEEEEeCC-CCCCEEcCccc
Q 011094 249 IGPKDFR-DPTTAWAGP-------DGKWRLTIGSK-IG-KTGISLVYQTTD-FKTYELLDEYL 300 (494)
Q Consensus 249 ~~~~~fR-DP~V~w~~~-------dg~w~MviGa~-~~-~~G~v~lY~S~D-l~~W~~~~~ll 300 (494)
+ ..+ +|.+ |.-+ +|+..+...+. .+ ..+.+.+|+|+| .++|+....+.
T Consensus 82 ~---~~~~~P~l-~~lP~~i~~~~~G~lL~~~~s~~~d~~~~~i~v~~S~D~G~TW~~~~~i~ 140 (367)
T 2ydt_A 82 W---GLRYQPQL-YELPRAFGKYPKGTVLCSGSSIPSDLSETLIEVYASRDKGYTWEFVSHVA 140 (367)
T ss_dssp S---CEEEEEEE-EECSSCBTTBCTTCEEEEEEECCTTCCCEEEEEEEESSSSSCCEEEEEEE
T ss_pred c---ccccCCeE-EEccccccccCCCcEEEEEecccCCCCCCeEEEEEECCCCCCCcCCeecc
Confidence 1 223 6766 4322 66655553332 12 245778999977 69999876654
|
| >3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A* | Back alignment and structure |
|---|
Probab=96.27 E-value=0.12 Score=52.76 Aligned_cols=117 Identities=15% Similarity=0.233 Sum_probs=72.3
Q ss_pred eeecceeccCCCCc-CCCcEEeeeEEEccCCeEEEEEeccCCC-ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCC
Q 011094 172 WLYLPIAMVPDQWY-DINGVWTGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHI 249 (494)
Q Consensus 172 W~~~p~AL~Pd~~~-D~~Gv~SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~ 249 (494)
|+...+ ..|...| +...+| .+++.++||.+++.|+....+ ......+..|+|++ ++|++.. .+.....++
T Consensus 6 ~~~~~i-f~~~~~~~~~~~~y-p~~v~L~dG~lLa~~~~~~~~~~~~~~~v~rS~DgG----~TW~~~~--~v~~~~~g~ 77 (355)
T 3a72_A 6 LTNVTI-FSPPSDYIVPRTLY-PRNEQLPNGDLLATWENYSPEPPAVYFPIYRSKDHG----KTWNEIS--RVHDTVNGY 77 (355)
T ss_dssp EEEEEE-ECCCTTSCTTSEEE-EEEEECTTSCEEEEEEECCCSSSCCCEEEEEESSTT----SCCEEEE--EECCTTTSS
T ss_pred ceeeeE-ecCCcccCCCCCcc-ceEEEcCCCCEEEEEEeecCCCCCceEEEEEEcCCC----cCcCCCc--ccCCCcCCc
Confidence 443333 3343344 456677 677788999999988876432 23445688899986 8999862 232222221
Q ss_pred CCCCCC-CCeeEeecC-------CCeEEEEEeee-cC-CeeEEEEEEeCC-CCCCEEcCccc
Q 011094 250 GPKDFR-DPTTAWAGP-------DGKWRLTIGSK-IG-KTGISLVYQTTD-FKTYELLDEYL 300 (494)
Q Consensus 250 ~~~~fR-DP~V~w~~~-------dg~w~MviGa~-~~-~~G~v~lY~S~D-l~~W~~~~~ll 300 (494)
..+ +|.+ |.-+ +|++.+...+. .+ ..+.+.+|+|+| .++|+....+.
T Consensus 78 ---~~~~~P~l-~~lp~~v~~~~~G~ll~~~~~~~~d~~~~~~~v~~S~D~G~TW~~~~~i~ 135 (355)
T 3a72_A 78 ---GLRYQPFL-YSLPERVGSFKKGTLLLAGSSIPTDLSSTDIVLYASQDDGMTWDFVSHIA 135 (355)
T ss_dssp ---CEEEEEEE-EECSSCBTTBCTTCEEEEEEECCTTCCCEEEEEEEESSTTSCCEEEEEEE
T ss_pred ---ccccCCcE-EecCcccccCCCCcEEEEEeeecCCCCCceEEEEEECCCCccCccCcccc
Confidence 234 6766 4433 78776663222 12 245677999977 79999977654
|
| >3zxk_A Hiaxhd3; hydrolase, sugar binding protein; HET: XYP EPE; 1.44A {Humicola insolens} PDB: 3zxj_A* 3zxl_A* | Back alignment and structure |
|---|
Probab=96.19 E-value=0.038 Score=59.73 Aligned_cols=53 Identities=13% Similarity=0.103 Sum_probs=38.8
Q ss_pred CCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcCcccc
Q 011094 239 GNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLH 301 (494)
Q Consensus 239 ~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~ 301 (494)
.||||. .++-||.|+ + .++.|||+-.+- +....+.+|+|+||++|+..+..+.
T Consensus 9 ~NPil~-------g~~~DP~ii-r-~~~~YY~~~st~-~~~pg~~i~~S~DLvnW~~~g~~l~ 61 (542)
T 3zxk_A 9 TNPVLW-------EDHPALEVF-R-VGSVFYYSSSTF-AYSPGAPVLKSYDLVHWTPVTHSVP 61 (542)
T ss_dssp ESCSCC-------SCCCSCEEE-E-ETTEEEEECCCB-TEESEEEEEEESSSSSCEEEEEEES
T ss_pred cCCccC-------CCCCCCeEE-E-ECCEEEEEEecC-ccCCCeEEEEcCCCCCccccccccc
Confidence 388885 256899996 3 477999985432 2222467999999999999988764
|
| >3k1u_A Beta-xylosidase, family 43 glycosyl hydrolase; structural genomics, APC20493, family 43 GL hydrolase, PSI-2; HET: MSE; 1.55A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=96.14 E-value=0.051 Score=54.11 Aligned_cols=116 Identities=18% Similarity=0.213 Sum_probs=68.2
Q ss_pred cCCCcccCCccceEEC-CEEEEEEeeCCCCCCCCCcEEEEEE-ecCccCeeecce-eccCCCCcCCC--cEEeeeEEEcc
Q 011094 125 PEKNWMNDPNGPLFYK-GWYHLFYQYNPDSAVWGNITWGHAV-SADLIHWLYLPI-AMVPDQWYDIN--GVWTGSATILP 199 (494)
Q Consensus 125 P~~gwmNDPNG~~y~~-G~YHLFYQ~nP~~~~wg~~~WGHA~-S~DLvhW~~~p~-AL~Pd~~~D~~--Gv~SGSavv~~ 199 (494)
+..++.=||+ ++.++ |+|.||+.+..... ++...-.+. +.|+ .-.-.+. ...|+..++.. .+.-|..+...
T Consensus 131 ~~~~~~IDp~-vf~Ddd~~~~~~~~~~~~~~--~~~~i~i~~l~~~~-~~~g~~~~i~~~~~~~e~~~~~~~EGp~i~k~ 206 (330)
T 3k1u_A 131 AWESFSLDAT-IFEHNEKLYYVWAQQDINIK--GHSNIYIAEMENPW-TLKTKPVMLTKPELEWEIKGFWVNEGPAVLKK 206 (330)
T ss_dssp SSCSCEEEEE-EEEETTEEEEEEEECCTTSS--SSBEEEEEEEEETT-EECSCCEEEECSCSGGGCSSSCBEEEEEEEEE
T ss_pred CCCCCccCce-EEEECCccEEEEeecCCCcC--CCceEEEEECCCCc-cccCCcEEecCCCccccccCCceeeCCEEEEE
Confidence 3345566997 66664 57777776554322 222222233 3443 2222232 23455444433 45688888888
Q ss_pred CCeEEEEEeccCCCccceEEEEEEcCCCCCCc-ceEEEcCCCceecC
Q 011094 200 DGQIVMLYTGSTDKSVQVQNLAYPADPSDPLL-LDWVKYPGNPVLVP 245 (494)
Q Consensus 200 dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL-~~W~K~~~nPVi~~ 245 (494)
+|.+||+|.+........+++|+|+...+|.. ..|++. .+|++..
T Consensus 207 ~G~YYL~ys~~~~~~~y~~~~~~s~~~~gP~~~~~~~~~-~~pi~~~ 252 (330)
T 3k1u_A 207 NGKIFITYSASATDVNYCIGMLTAEENSNLLDKNSWTKS-QTPVFKT 252 (330)
T ss_dssp TTEEEEEEEESCSSTTCEEEEEEEETTSCTTSGGGCEEC-SSCSBCC
T ss_pred CCEEEEEEEeCCCCCCceEEEEEECCCCCCCCCcccccc-CCCEEEc
Confidence 99999999866444445678899988766642 358875 5777753
|
| >4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=95.77 E-value=0.069 Score=57.48 Aligned_cols=147 Identities=18% Similarity=0.209 Sum_probs=86.2
Q ss_pred ccCCccceEE--CCEEEEEEeeCCC---CCCC-------C---CcEEEEEEecC-ccCeeecceeccCCCCc-CCCcEE-
Q 011094 130 MNDPNGPLFY--KGWYHLFYQYNPD---SAVW-------G---NITWGHAVSAD-LIHWLYLPIAMVPDQWY-DINGVW- 191 (494)
Q Consensus 130 mNDPNG~~y~--~G~YHLFYQ~nP~---~~~w-------g---~~~WGHA~S~D-LvhW~~~p~AL~Pd~~~-D~~Gv~- 191 (494)
..||. ++++ +|+-+|||-+... ...| . ....-..+|+| .++|.. +..|.+...- .-..++
T Consensus 248 ~~nP~-lvvD~~tG~I~L~~~~~~g~~~~~~w~~~~~g~~~~~t~~~~~~~S~D~G~TWs~-p~~l~~~~~~~~~~~~~~ 325 (523)
T 4fj6_A 248 VGDPS-ILVDEKTNTIWVVAAWTHGMGNERAWWNSMPGMTPDETAQLMLVKSEDDGKTWSE-PINITSQVKDPSWYFLLQ 325 (523)
T ss_dssp EEEEE-EEECTTTCCEEEEEEECCSCTTSCGGGTCCSSSSTTTSCEEEEEEESSTTSSCCC-CEECHHHHCCTTCSEEEE
T ss_pred ccCce-EEEECCCCeEEEEEEecccccccccccccccCCCCCcceEEEEEEcCCCCccCCC-CeeecccccCCcceEEec
Confidence 46886 7775 6999999877532 0111 1 12344566665 899976 3333221100 011223
Q ss_pred -eeeEEEccCCeEEE--EEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeE
Q 011094 192 -TGSATILPDGQIVM--LYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKW 268 (494)
Q Consensus 192 -SGSavv~~dG~~~~--~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w 268 (494)
.|+.++..||++++ .|+. ..+...-.+.+|+|.+ .+|+... ++- ....+|.++ .-++|+.
T Consensus 326 g~G~GI~l~dGrLv~P~~~~~--~~g~~~s~i~~S~D~G----~TW~~~~--~~~--------~~~~e~~vv-e~~dG~L 388 (523)
T 4fj6_A 326 GPGRGITMQDGTLVFPIQFID--ATRVPNAGIMYSKDRG----KTWHLHN--LAR--------TNTTEAQVA-EVEPGVL 388 (523)
T ss_dssp CSEECEECTTSCEEEEEEEEC--TTSCEEEEEEEESSTT----SSCEECC--CSE--------ETEEEEEEE-EEETTEE
T ss_pred CCCcceEEeCCeEEEEEEEEc--CCCCEEEEEEEECCCC----CeEEECC--CCC--------ccccCCEEE-EecCCEE
Confidence 35566778999774 3332 2233455677899876 8999853 221 124688885 2257888
Q ss_pred EEEEeeecCCeeEEEEEEeCC-CCCCEEcC
Q 011094 269 RLTIGSKIGKTGISLVYQTTD-FKTYELLD 297 (494)
Q Consensus 269 ~MviGa~~~~~G~v~lY~S~D-l~~W~~~~ 297 (494)
+|.+.+.. .|...+|+|.| ..+|+...
T Consensus 389 ~~~~R~~~--~g~r~v~~S~D~G~TWt~~~ 416 (523)
T 4fj6_A 389 MLNMRDNR--GGSRAVATTKDLGKTWTEHP 416 (523)
T ss_dssp EEEEEETT--CSBCEEEEESSTTSSCEECT
T ss_pred EEEEEecC--CCcEEEEEECCCCCccCcCc
Confidence 77665432 24456899987 69999754
|
| >3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A* | Back alignment and structure |
|---|
Probab=95.69 E-value=0.15 Score=52.06 Aligned_cols=144 Identities=20% Similarity=0.279 Sum_probs=81.4
Q ss_pred eEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEeccCC----
Q 011094 137 LFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTD---- 212 (494)
Q Consensus 137 ~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~---- 212 (494)
+..+|...++|.....+..+ ...+.|++|+|..+|...-....+ ..+... .-...++..+||+++|.|.-...
T Consensus 155 ~~~~G~l~~~~~~~~~~~~~-~~~~~~~~S~DG~TWs~~~~~~~~-~~~~~r-pg~p~v~~l~dG~l~l~y~~~~~~~~~ 231 (355)
T 3a72_A 155 LANKGKLICYYSDQRDNATY-GQTMVHQVTNDLKNWGPVVEDVTY-PTYTDR-PGMPVVTKLPNGQYFYVYEYGSFFGTE 231 (355)
T ss_dssp EEETTEEEEEEEECCCTTTC-SCEEEEEEESSSSSCCCCEEEECC-SSTTCE-EEEEEEEECTTSCEEEEEEEEBCTTSS
T ss_pred EccCCeEEEEECCCCCCCCC-CcEEEEEECCCCCCCCCCeecccc-CccCCC-CCceEEEECCCCCEEEEEEECCCcccC
Confidence 44689999999765422222 356899999999999754322222 111111 11235556789999998876432
Q ss_pred CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeec---CCCeEEEEEeeecCCeeEEEEEEeCC
Q 011094 213 KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAG---PDGKWRLTIGSKIGKTGISLVYQTTD 289 (494)
Q Consensus 213 ~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~---~dg~w~MviGa~~~~~G~v~lY~S~D 289 (494)
........++|+|+ .+|....+.++... .+ ....--|++.|.. .+|+ +++.+. .... ||.|+|
T Consensus 232 ~~~~~~~~~iS~DG-----~tw~~~~~~~~~~~-~~--~~~~g~p~v~~~~~gg~~g~--ll~s~~--~~~~--v~~s~~ 297 (355)
T 3a72_A 232 TYSFPLYYRLSSDP-----ENIASAPGQRLVVS-SG--TQPTSSPYAVWTPYGGENGT--IIVSSG--TQGT--LFINKA 297 (355)
T ss_dssp SCBCBEEEEEESST-----TCCTTSCCEECCBT-TC--CCCBSSCEEEEESTTSTTCE--EEEECS--SCSS--EEEESS
T ss_pred CCceeEEEEECCCc-----ccccCcCCcceecC-CC--cccCCCCeEEECcCCCCCCe--EEEEcC--CCcE--EEEECC
Confidence 12334677889885 78865432333322 22 1235678888863 2343 332221 1122 456655
Q ss_pred -C-CCCEEcC
Q 011094 290 -F-KTYELLD 297 (494)
Q Consensus 290 -l-~~W~~~~ 297 (494)
. .+|+...
T Consensus 298 ~g~~~W~~~~ 307 (355)
T 3a72_A 298 LGEGEWTEIP 307 (355)
T ss_dssp TTCSCBEEEC
T ss_pred CCCCCCeECC
Confidence 4 7898765
|
| >2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A | Back alignment and structure |
|---|
Probab=95.49 E-value=0.3 Score=50.06 Aligned_cols=144 Identities=15% Similarity=0.245 Sum_probs=80.5
Q ss_pred eEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcC-CCcEEeeeEEEccCCeEEEEEeccCC---
Q 011094 137 LFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYD-INGVWTGSATILPDGQIVMLYTGSTD--- 212 (494)
Q Consensus 137 ~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D-~~Gv~SGSavv~~dG~~~~~YTG~~~--- 212 (494)
+..+|+..++|........ ....+.|++|+|..+|...-. +.+...+. ..| -..++..+||+++|.|.-...
T Consensus 160 ~~~~G~l~v~~~d~~~~~~-~~q~l~~~~S~DG~TWs~~~~-~~~~~~~~~rpg--~p~v~~l~dG~l~~~y~~~~~~~~ 235 (367)
T 2ydt_A 160 MTYKEKLILYYSDQRDNAT-HSQKLVHQTTTDLKKWSKVVD-DTKYANYYARPG--MPTVAKLPNNEYIYVYEYGGGPNP 235 (367)
T ss_dssp EEETTEEEEEEEECCSTTT-CSSEEEEEEESSSSSCCCCEE-EECCSSTTCEEE--EEEEEECTTSCEEEEEEEETCSCC
T ss_pred ECCCCcEEEEECCCCCCCC-CCcEEEEEECCCCCCCCCcee-ccccCCcCCCCC--cceEEECCCCcEEEEEEecCCCCc
Confidence 4468999999966442112 235688999999999975432 22222221 112 133455789999998874321
Q ss_pred ----CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeec---CCCeEEEEEeeecCCeeEEEEE
Q 011094 213 ----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAG---PDGKWRLTIGSKIGKTGISLVY 285 (494)
Q Consensus 213 ----~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~---~dg~w~MviGa~~~~~G~v~lY 285 (494)
........++|.|+ .+|....+.++.. +.+ ...-.-|++.|.. .+|+ +++.+. + +. -+|
T Consensus 236 ~~~~~~~~~~~~~~S~DG-----~tw~~~~~~~l~~-~~~--~~~~~sp~v~~~p~~~~~g~--l~~s~~-~--~~-~v~ 301 (367)
T 2ydt_A 236 PAGSDYWFPVYYRLSKDP-----QKFLNKAHHQIVS-NDG--TTPAGSPYVVWTPYGGKNGT--IVVSCG-T--RS-EIF 301 (367)
T ss_dssp CTTCSCCCBEEEEEESST-----TCCTTSCCEECCC-TTC--CCCBSSCEEEEESTTSTTCE--EEEECS-S--CS-CEE
T ss_pred ccccccccceEEEEcCCc-----cccCCcCCceeec-CCC--cccCcCceEEECcCCCCCCe--EEEEcC-C--Cc-eEE
Confidence 11234567889885 7887543222322 222 1224578998863 3453 333221 1 11 257
Q ss_pred EeCCC-C--CCEEcCc
Q 011094 286 QTTDF-K--TYELLDE 298 (494)
Q Consensus 286 ~S~Dl-~--~W~~~~~ 298 (494)
.|+|+ . .|+....
T Consensus 302 ~~~~~g~~~~W~~~~~ 317 (367)
T 2ydt_A 302 TNQALGDASAWKKWDV 317 (367)
T ss_dssp EESSTTCTTCCEEECC
T ss_pred EECCCCCCCcceeccC
Confidence 77664 4 7988644
|
| >3vss_A Beta-fructofuranosidase; glycoside hydrolase family 68, beta-propeller, hydrolase; HET: FRU; 1.97A {Arthrobacter} PDB: 3vsr_A* | Back alignment and structure |
|---|
Probab=95.09 E-value=0.17 Score=54.04 Aligned_cols=149 Identities=17% Similarity=0.168 Sum_probs=87.6
Q ss_pred EECCEEEEEEeeC---CC--CCCCC--CcEEEEEE-----ecCccCee---ecceeccCCCC-cCC------CcEEeeeE
Q 011094 138 FYKGWYHLFYQYN---PD--SAVWG--NITWGHAV-----SADLIHWL---YLPIAMVPDQW-YDI------NGVWTGSA 195 (494)
Q Consensus 138 y~~G~YHLFYQ~n---P~--~~~wg--~~~WGHA~-----S~DLvhW~---~~p~AL~Pd~~-~D~------~Gv~SGSa 195 (494)
..+|+++|||... .. +.... ....++|+ |.|.++++ ..++.+.||.. |+. ...-..-+
T Consensus 170 ~~DG~i~LFYT~v~~~~~~~g~~~~~~~Q~ia~A~~~i~~d~dgv~~~~~~~~~~l~~~DG~~Yqt~~q~~~~~fRDP~v 249 (496)
T 3vss_A 170 SKNGEIKLFFTDVAFYRNSDGTNIKPYDPRIALSVGKVKANKKGVTLTGFNKVTDLLQADGTYYQTGAQNEFFNFRDPFT 249 (496)
T ss_dssp CTTCEEEEEEEEEEECBCTTSCBSSCCEEEEEEEEEEEEEETTEEEEEEEEEEEEEECCCSSSBCCTTTCTTCCCEEEEE
T ss_pred CCCCeEEEEEEEeecccCCCccccccceeEEEEEeeeeeecCCcceEeccCCCcccccCChhhhhccccccccccCCCee
Confidence 4689999999743 11 11111 13456655 67777665 45567788763 321 22346666
Q ss_pred EEcc--CCeEEEEEeccCCC-c---------------------------------cceEEEEEEcCCCCCCcceEEEcCC
Q 011094 196 TILP--DGQIVMLYTGSTDK-S---------------------------------VQVQNLAYPADPSDPLLLDWVKYPG 239 (494)
Q Consensus 196 vv~~--dG~~~~~YTG~~~~-~---------------------------------~q~q~lA~S~D~~d~lL~~W~K~~~ 239 (494)
+.++ +|..||++.|++.. + .-.++||..++. .+..|+-.
T Consensus 250 f~DP~~dG~~YLVFEgnT~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~anG~IGLa~~~s~---D~~~We~~-- 324 (496)
T 3vss_A 250 FEDPAHPGETFMVFEGNSAMQRETATCNEADLGYRQGDPYAETVDDVNASGATYQIGNVGLAKAKNK---QLTEWEFL-- 324 (496)
T ss_dssp ECCTTSTTCCEEEEEEEBSSCGGGCCCCHHHHCCCTTCTTCCCHHHHHHHTGGGCEEEEEEEEESST---TSCCEEEE--
T ss_pred EecCCCCCcEEEEEecccCCcCccccccccccccccccccccccccccccccccccceEEEEEccCC---CCCccEEe--
Confidence 6553 78999999887631 0 134567765442 25889876
Q ss_pred CceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-----CCee--EEEEEEeCCCC-CCEE
Q 011094 240 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----GKTG--ISLVYQTTDFK-TYEL 295 (494)
Q Consensus 240 nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-----~~~G--~v~lY~S~Dl~-~W~~ 295 (494)
.|++..... ...+--|.|+ + .+|+||++..++. .-.| .++-|.|+.|. .|+-
T Consensus 325 ~PL~~a~~v--~deiErP~vf-~-~dGKyYLFt~s~~~t~a~~~~g~~~~yGfVSd~L~G~Y~P 384 (496)
T 3vss_A 325 PPILSANCV--TDQTERPQIY-F-KDGKSYLFTISHRGTFAAGLDGPEGVYGFVGDGIRSDYQP 384 (496)
T ss_dssp EEEEEEETT--BSCCEEEEEE-E-ETTEEEEEEEECSTTBCTTCCCCSEEEEEEESSSSBCCEE
T ss_pred CccccCCCC--CCceeCCcEE-E-ECCEEEEEEecccccccccCCCCceeEEEecCCCCCCcee
Confidence 477764321 2345679995 3 6899999987652 1112 23346676553 4554
|
| >2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A* | Back alignment and structure |
|---|
Probab=94.54 E-value=0.23 Score=50.90 Aligned_cols=152 Identities=18% Similarity=0.234 Sum_probs=84.9
Q ss_pred ccccceeeeecCCCcccCCccceEE-CCEEEEEEeeCCCC-----C--------------CC-CCcEEEEEEecC-ccCe
Q 011094 115 TWQRTSFHFQPEKNWMNDPNGPLFY-KGWYHLFYQYNPDS-----A--------------VW-GNITWGHAVSAD-LIHW 172 (494)
Q Consensus 115 ~w~Rp~~Hf~P~~gwmNDPNG~~y~-~G~YHLFYQ~nP~~-----~--------------~w-g~~~WGHA~S~D-LvhW 172 (494)
.|..++.=...+.+-..+|. ++.. +|+-+|||.+++.. . .| .........|+| .++|
T Consensus 87 tW~~~~~l~~~~~~~~~~Pt-~v~~~~g~I~l~~~~~~g~y~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~S~D~G~TW 165 (386)
T 2xzi_A 87 DWEPLREVVGSGAGTWGNPT-PVVDDDNTIYLFLSWNGATYSQNGKDVLPDGTVTKKIDSTWEGRRHLYLTESRDDGNTW 165 (386)
T ss_dssp GBCCCEEEECCSSSEEEEEE-EEECTTSCEEEEEEEECTTEESSSCCBCTTSCBCEECCSSTTTSCEEEEEEESSTTSCC
T ss_pred eccCcEEEeeCCCCcccccE-EEEeCCCCEEEEEEeccccccccCcceeccCceecccccccccccEEEEEEECCCCccC
Confidence 45444432222333445675 5666 68999999654321 0 01 112345667877 8999
Q ss_pred eecceecc----CCCCcCCCcEEeeeEEEccCCeEEEEEeccCCCccceEEEEEEcC--CCCCCcceEEEcCCCceecCC
Q 011094 173 LYLPIAMV----PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPAD--PSDPLLLDWVKYPGNPVLVPP 246 (494)
Q Consensus 173 ~~~p~AL~----Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D--~~d~lL~~W~K~~~nPVi~~p 246 (494)
... ..|. +.. +.....-.|+.|...||++++-.. ..+.+|+| .+ .+|+.... + ..
T Consensus 166 s~p-~~l~~~~~~~~-~~~~~~~~g~gI~l~dGrLv~p~~---------~~~~~S~D~~~G----~tW~~~~~--~-~~- 226 (386)
T 2xzi_A 166 SKP-VDLTKELTPDG-WAWDAVGPGNGIRLTTGELVIPAM---------GRNIIGRGAPGN----RTWSVQRL--S-GA- 226 (386)
T ss_dssp CCC-EECHHHHSCTT-CCSCCBCSSCCEECTTSCEEEEET---------TEEEEEESSTTS----CEEEEEEC--T-TC-
T ss_pred CCc-ccCcccccccc-ceeeccCCccEEEecCCEEEEEeE---------EEEEEccCCCCC----CcccccCc--C-CC-
Confidence 852 2222 211 111111224556667998876443 24567888 65 89987522 1 11
Q ss_pred CCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcC
Q 011094 247 RHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLD 297 (494)
Q Consensus 247 ~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~ 297 (494)
-.+|.++ .-.+|+.+|+.... ..+...+|+|.| .+|+...
T Consensus 227 -------~~e~~vv-e~~dG~L~~~~r~~--~g~~r~v~~S~D-~tWt~~~ 266 (386)
T 2xzi_A 227 -------GAEGTIV-QTPDGKLYRNDRPS--QKGYRMVARGTL-EGFGAFA 266 (386)
T ss_dssp -------CSSEEEE-ECTTSCEEEEECCS--SSEEEEEEEEET-TEECCCE
T ss_pred -------CCcCEEE-EeCCCcEEEEEeCC--CCccEEEEEEeC-CccCccc
Confidence 1477774 33678887776432 222467999999 9998643
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* | Back alignment and structure |
|---|
Probab=94.41 E-value=0.2 Score=55.23 Aligned_cols=159 Identities=18% Similarity=0.126 Sum_probs=91.5
Q ss_pred Cccccccccc----eeeeecCCCcccCCccceE------E--CCEEEEEEeeCCCCC-------CCCCcEEEEEEecC-c
Q 011094 110 TNAMFTWQRT----SFHFQPEKNWMNDPNGPLF------Y--KGWYHLFYQYNPDSA-------VWGNITWGHAVSAD-L 169 (494)
Q Consensus 110 ~~~~~~w~Rp----~~Hf~P~~gwmNDPNG~~y------~--~G~YHLFYQ~nP~~~-------~wg~~~WGHA~S~D-L 169 (494)
+..++.|++- ..-+.|... .|.+|+ | . +|+++|||.-+-... ..+...-.+|+|+| +
T Consensus 70 S~DLvhW~~~~~~~~~aL~P~~~--~D~~G~-~SGSav~~~~~g~~~~~YTg~~~~~~~~~~~~~~~~q~Q~lA~S~D~g 146 (634)
T 3lig_A 70 TANLATYTDTSDNGSFLIQPGGK--NDPVAV-FDGAVIPVGVNNTPTLLYTSVSFLPIHWSIPYTRGSETQSLAVARDGG 146 (634)
T ss_dssp ESSSSCCEESCSTTCEEECSCSS--SCSSEE-EEEEEESSCGGGSCEEEEEEECSCCCCTTSCCCTTSEEEEEEEEEGGG
T ss_pred ecCcCceeECcCCCCceecCCCC--CCCCCc-EeeEEEEECCCCEEEEEEEecccccccccCcCCCCcEEEEEEEECCCC
Confidence 5557788765 566777663 588874 3 2 589999998652111 12345678999998 7
Q ss_pred cCeeecc--eecc-CCCCcCCCcEEeeeEEEc-----------------------------cCCeEEEEEeccCCCccce
Q 011094 170 IHWLYLP--IAMV-PDQWYDINGVWTGSATIL-----------------------------PDGQIVMLYTGSTDKSVQV 217 (494)
Q Consensus 170 vhW~~~p--~AL~-Pd~~~D~~Gv~SGSavv~-----------------------------~dG~~~~~YTG~~~~~~q~ 217 (494)
++|+..+ ++|. |...++....-..-+... ++|+++|+-.+...+....
T Consensus 147 ~~w~K~~~nPVi~~~p~g~~~~~fRDPkV~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ymvlg~~~~~~~g~ 226 (634)
T 3lig_A 147 RRFDKLDQGPVIADHPFAVDVTAFRAPFVFRSARLDVLLSLDEEVARNETAVQQAVDGWTEKNAPWYVAVSGGVHGVGPA 226 (634)
T ss_dssp TEEEECSSSCSBCSSSTTCCEEEEEEEEEECCHHHHHHHHSCTTTTTSHHHHHHHHHTCCGGGCCCEEEEEEEETTTEEE
T ss_pred CEEEECCCCceEcCCCcccCCCccCCCeEccccCccccccccccccccccccccccccccCCCCeEEEEEEEecCCCCCE
Confidence 8999874 4453 222233334556666531 4788888876654443223
Q ss_pred EEEEE--EcCCCCCCcceEEEcCCCceecCCCC-----------CCCCCCCCCeeEeecC------CCeEEEEEeee
Q 011094 218 QNLAY--PADPSDPLLLDWVKYPGNPVLVPPRH-----------IGPKDFRDPTTAWAGP------DGKWRLTIGSK 275 (494)
Q Consensus 218 q~lA~--S~D~~d~lL~~W~K~~~nPVi~~p~g-----------~~~~~fRDP~V~w~~~------dg~w~MviGa~ 275 (494)
+.+-. |.| |.+|++|+-. .++...+.. -....|-.|-.+--+. +++|+|+++..
T Consensus 227 v~lY~~~s~d--d~~l~~W~~~--g~l~~~~~~~~~g~~~~~~~~~G~~wECPdlf~l~~~g~~~~~~~~vl~~~~~ 299 (634)
T 3lig_A 227 QFLYRQNGGN--ASEFQYWEYL--GEWWQEATNSSWGDEGTWAGRWGFNFETGNVLFLTEEGHDPQTGEVFVTLGTE 299 (634)
T ss_dssp EEEEEEGGGC--TTCCSCEEEE--EEEEECCTTCCSSSSSCSSCCCCSEEEEEEEEEECSSSBCTTTSEEEEEEEEE
T ss_pred EEEEEeCCCC--ccccCCceEe--cccccccccccccccccccCceeeEEECCCEEEECCcccCCCCCcEEEEECCC
Confidence 33323 344 1235899875 566543211 0012355666632222 26799999864
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* | Back alignment and structure |
|---|
Probab=94.14 E-value=0.3 Score=52.44 Aligned_cols=142 Identities=16% Similarity=0.144 Sum_probs=86.8
Q ss_pred cCCccccccccceeeeecCCCcccCCccc-----eEE--------------CCEEEEEEeeCCCCCCCCCcEEEEEEecC
Q 011094 108 NWTNAMFTWQRTSFHFQPEKNWMNDPNGP-----LFY--------------KGWYHLFYQYNPDSAVWGNITWGHAVSAD 168 (494)
Q Consensus 108 ~~~~~~~~w~Rp~~Hf~P~~gwmNDPNG~-----~y~--------------~G~YHLFYQ~nP~~~~wg~~~WGHA~S~D 168 (494)
..+..++.|++..--+.|.. |-+|. +.+ +|++++||.-+.. +...-++|+|+|
T Consensus 59 a~S~DLvhW~~~~~aL~P~~----d~~G~~SGSav~d~~~t~g~~~~~~~p~~~l~~~YTg~~~----~~q~q~lA~S~D 130 (509)
T 3kf3_A 59 ATSNDLVHWDEHEIAIGPEH----DNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIP----DNQTQDIAFSLD 130 (509)
T ss_dssp EEESSSSSCEECSCCBCCSS----TTCEEEEEEEEECTTCTTSCCCTTSCGGGCEEEEEEEEET----TEEEEEEEEESS
T ss_pred EEccCCCCcEECcccccccc----cCCCEEeceEEEeCCccccccccccCCCCceEEEECCCCC----CCeeEEEEEECC
Confidence 34556677866555566653 44442 222 2589999986432 235578999999
Q ss_pred -ccCeeecc--eeccCCCCcCCCcEEeeeEEEc-cCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceec
Q 011094 169 -LIHWLYLP--IAMVPDQWYDINGVWTGSATIL-PDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLV 244 (494)
Q Consensus 169 -LvhW~~~p--~AL~Pd~~~D~~Gv~SGSavv~-~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~ 244 (494)
++||+..+ ++|... ....-+..++.. ++|+++|+.... . ...+.+..|+|+ ++|+.. .++..
T Consensus 131 ~g~~~~k~~~nPVi~~~----~~~fRDPkVfw~~~~g~w~Mv~g~~-~--~g~i~ly~S~DL-----~~W~~~--~~~~~ 196 (509)
T 3kf3_A 131 GGYTFTKYENNPVIDVS----SNQFRDPKVFWHEDSNQWIMVVSKS-Q--EYKIQIFGSANL-----KNWVLN--SNFSS 196 (509)
T ss_dssp SSSSCEECTTCCSBCCS----CSSCEEEEEEEETTTTEEEEEEEEG-G--GTEEEEEEESSS-----SSCEEE--EEECC
T ss_pred CCcceEEcCCCceEcCC----CCcccCCeEEEECCCCEEEEEEEEC-C--CCEEEEEECCCC-----CCceEc--ccccc
Confidence 79999864 445321 234567777543 468999998643 2 124678889884 899986 34433
Q ss_pred CCCCCCCCCCCCCeeEeec----CCCeEEEEEee
Q 011094 245 PPRHIGPKDFRDPTTAWAG----PDGKWRLTIGS 274 (494)
Q Consensus 245 ~p~g~~~~~fRDP~V~w~~----~dg~w~MviGa 274 (494)
...| ..|-.|-.+--. .+++|+|+++.
T Consensus 197 ~~~G---~mwECPdlf~l~~~~~~~~k~vL~~s~ 227 (509)
T 3kf3_A 197 GYYG---NQYECPGLIEVPIENSDKSKWVMFLAI 227 (509)
T ss_dssp BCCC---SCEEEEEEEEEEBTTSSCEEEEEEEEE
T ss_pred CCcc---ceeECCeEEEECccCCCCceEEEEEcc
Confidence 1112 246677773211 14689999863
|
| >2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A* | Back alignment and structure |
|---|
Probab=94.05 E-value=0.58 Score=48.79 Aligned_cols=124 Identities=16% Similarity=0.205 Sum_probs=67.6
Q ss_pred EEEEEecC-ccCeeecceeccCC--CCcCC-CcEEeeeEEEccC----CeEEE-EEeccCCCccceEEEEEEcCCCCCCc
Q 011094 161 WGHAVSAD-LIHWLYLPIAMVPD--QWYDI-NGVWTGSATILPD----GQIVM-LYTGSTDKSVQVQNLAYPADPSDPLL 231 (494)
Q Consensus 161 WGHA~S~D-LvhW~~~p~AL~Pd--~~~D~-~Gv~SGSavv~~d----G~~~~-~YTG~~~~~~q~q~lA~S~D~~d~lL 231 (494)
.....|+| ..+|... ..|.+. ..+.. .+.-.|+.+...+ |++++ .|.... .+.....+.+|+|.+
T Consensus 189 ~~~~~S~D~G~TWs~p-~~l~~~~~~~~~~~~~~~~g~Gi~l~~g~~~Grlv~p~~~~~~-~g~~~~~v~~S~D~G---- 262 (449)
T 2bf6_A 189 INLVYSDDDGKTWSEP-QNINFQVKKDWMKFLGIAPGRGIQIKNGEHKGRIVVPVYYTNE-KGKQSSAVIYSDDSG---- 262 (449)
T ss_dssp EEEEEESSTTSSCCCC-EECHHHHCCTTCSCEEECSEECEECCSSTTTTCEEEEEEEECT-TCCEEEEEEEESSTT----
T ss_pred EEEEEEcCCCccCCCC-ccCccccccccceeecccCCeEEEeccCCcCCEEEEEEEEEcC-CCCEEEEEEEECCCC----
Confidence 34567877 7999862 222211 11110 1222345444454 78776 443322 223455788999976
Q ss_pred ceEEEcCCCceecC---CCC-------C--CCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEEeCC-CCCCEEc
Q 011094 232 LDWVKYPGNPVLVP---PRH-------I--GPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTD-FKTYELL 296 (494)
Q Consensus 232 ~~W~K~~~nPVi~~---p~g-------~--~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~D-l~~W~~~ 296 (494)
.+|+... ++... +.| + ...+..+|.++ .-++|+.+|+.... .|.+.+|+|.| ..+|+..
T Consensus 263 ~tW~~~~--~~~~~~~~~~G~~~~~~~~~~g~~~~~e~~vv-e~~dG~l~~~~R~~---~g~~~v~~S~D~G~TWs~~ 334 (449)
T 2bf6_A 263 KNWTIGE--SPNDNRKLENGKIINSKTLSDDAPQLTECQVV-EMPNGQLKLFMRNL---SGYLNIATSFDGGATWDET 334 (449)
T ss_dssp SSCEECC--CTTTTEECTTSCEECTTTCCCSTTCEEEEEEE-ECTTSCEEEEEEES---SSEEEEEEESSTTSCCCSC
T ss_pred CceeECC--ccCcccccccccccccccccccCCCCCCCEEE-EecCCEEEEEEEeC---CCCEEEEEECCCCccccCc
Confidence 8999853 21110 001 0 01234566674 34678888886543 46778999988 6999854
|
| >1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* | Back alignment and structure |
|---|
Probab=93.87 E-value=2.7 Score=44.88 Aligned_cols=151 Identities=17% Similarity=0.085 Sum_probs=82.6
Q ss_pred CCEEEEEEeeCCCCCC-CCCcEEEEEEecC-ccCeeecceeccCCC-CcCCCcEEeeeEEEcc-CCeEEEEEeccCC---
Q 011094 140 KGWYHLFYQYNPDSAV-WGNITWGHAVSAD-LIHWLYLPIAMVPDQ-WYDINGVWTGSATILP-DGQIVMLYTGSTD--- 212 (494)
Q Consensus 140 ~G~YHLFYQ~nP~~~~-wg~~~WGHA~S~D-LvhW~~~p~AL~Pd~-~~D~~Gv~SGSavv~~-dG~~~~~YTG~~~--- 212 (494)
+|....||...+.... .+.+......|+| ..+|..... |..+. .-...++...+.++++ +|+++|+|.....
T Consensus 31 ~G~lla~~~~~~~~~~~~~~~~i~~~rS~DgG~TW~~~~~-l~~~~~~~~~~~~~~P~~~~d~~~g~i~l~~~~~~~~~~ 109 (601)
T 1w8o_A 31 DGDLLASYDGRPTGIGAPGPNSILQRRSTDGGRTWGEQQV-VSAGQTTAPIKGFSDPSYLVDRETGTIFNFHVYSQRQGF 109 (601)
T ss_dssp TSCEEEEEEECTTSCSTTSCCEEEEEEESSTTSSCCCCEE-EECCBCSSSCBEEEEEEEEECTTTCCEEEEEEEESSCCT
T ss_pred CCCEEEEEcccCCCCCCCCcceEEEEEeCCCCCCCCCCEE-EecCccCCCCCccccceEEEECCCCeEEEEEEeecCCCc
Confidence 5667777766554322 3556667788888 589987543 33321 1123456677777664 7999999974211
Q ss_pred ----------C-ccceEEEEEEcCCCCCCcceEEEcCCCceec---CCCCCCCCCCCCCeeEeecC----CCeEEEEEee
Q 011094 213 ----------K-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLV---PPRHIGPKDFRDPTTAWAGP----DGKWRLTIGS 274 (494)
Q Consensus 213 ----------~-~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~---~p~g~~~~~fRDP~V~w~~~----dg~w~MviGa 274 (494)
+ ......+..|.|++ ++|.+.. .+. +.+++. ..|..|--...-. .|++++.+..
T Consensus 110 ~~~~~g~~~~~~~~~~~~~~~S~D~G----~TWs~~~---~~~~~~~~~~~~-~~~~~~g~gi~~~~~~~~G~l~~~~~~ 181 (601)
T 1w8o_A 110 AGSRPGTDPADPNVLHANVATSTDGG----LTWSHRT---ITADITPDPGWR-SRFAASGEGIQLRYGPHAGRLIQQYTI 181 (601)
T ss_dssp TTCCSCCCTTCTTSCEEEEEEESSTT----SSCEEEE---CGGGSCCSTTCC-EEEECSEECEECCSSTTTTCEEEEEEE
T ss_pred cccccCCCccCCceEEEEEEEecCCC----CCCCCcc---cccccccCCCee-EEEecCCeEEEccCCCcCceEEEEEEE
Confidence 0 11235788899976 8999853 121 111211 1123342111112 3666654332
Q ss_pred ecCC-eeEEEEEEeCC-CCCCEEcCcc
Q 011094 275 KIGK-TGISLVYQTTD-FKTYELLDEY 299 (494)
Q Consensus 275 ~~~~-~G~v~lY~S~D-l~~W~~~~~l 299 (494)
.... .....++.|+| .++|+....+
T Consensus 182 ~~g~~~~~~~~~~S~D~G~TW~~~~~~ 208 (601)
T 1w8o_A 182 INAAGAFQAVSVYSDDHGRTWRAGEAV 208 (601)
T ss_dssp ECTTSCEEEEEEEESSTTSSCEECCCB
T ss_pred cCCCCceeEEEEEECCCCcCccCCCCC
Confidence 2111 12345566777 7999986543
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} PDB: 3rwk_X* | Back alignment and structure |
|---|
Probab=93.22 E-value=0.5 Score=50.76 Aligned_cols=121 Identities=13% Similarity=0.136 Sum_probs=73.1
Q ss_pred EEEEEEeeCCCCCCCCCcEEEEEEecC-ccCeeecc--eeccCCC--CcCCC---cEEeeeEEEc-cCCeEEEEEeccCC
Q 011094 142 WYHLFYQYNPDSAVWGNITWGHAVSAD-LIHWLYLP--IAMVPDQ--WYDIN---GVWTGSATIL-PDGQIVMLYTGSTD 212 (494)
Q Consensus 142 ~YHLFYQ~nP~~~~wg~~~WGHA~S~D-LvhW~~~p--~AL~Pd~--~~D~~---Gv~SGSavv~-~dG~~~~~YTG~~~ 212 (494)
.+++||.-+... .+...-++|+|+| .++|+..+ ++|.+.. ..+.. ..-+..++.. ++|+++|++....
T Consensus 120 ~l~l~YTg~~~~--~~~q~q~lA~s~D~g~~w~k~~~nPVi~~~~~~~~~~~~~~~fRDPkV~~~~~~g~w~mv~g~~~- 196 (516)
T 3sc7_X 120 PYLAWFTGYTTS--SQTQDQRLAFSVDNGATWTKFQGNPIISTSQEAPHDITGGLESRDPKVFFHRQSGNWIMVLAHGG- 196 (516)
T ss_dssp CEEEEEEEEETT--TTEEEEEEEEESSTTSCCEECTTCCSBCHHHHTTTCTTSSSSCEEEEEEEETTTTEEEEEEECBT-
T ss_pred eEEEEEeeeeCC--CCceEEEEEEecCCCceEEEcCCCceEcCCCcccccccCCCcccCCeEEEECCCCeEEEEEEECC-
Confidence 599999866422 1235678999999 58999864 4444321 11211 2367777654 3688999985321
Q ss_pred CccceEEEEEEcCCCCCCcceEEEcCCCceecCC-CCC--CCCCCCCCeeEeec----CCCeEEEEEee
Q 011094 213 KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP-RHI--GPKDFRDPTTAWAG----PDGKWRLTIGS 274 (494)
Q Consensus 213 ~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p-~g~--~~~~fRDP~V~w~~----~dg~w~MviGa 274 (494)
...+.+..|+|. ++|+.. .++.... .|+ ....|-.|-.+--. .+++|+|+++.
T Consensus 197 --~~~i~ly~S~DL-----~~W~~~--~~l~~~~~~g~~~~~~mwECPdlf~l~~~g~~~~k~VL~~s~ 256 (516)
T 3sc7_X 197 --QDKLSFWTSADT-----INWTWQ--SDLKSTSINGLSSDITGWEVPDMFELPVEGTEETTWVVMMTP 256 (516)
T ss_dssp --TCEEEEEEESSS-----SSCEEE--EEEEGGGSTTCCTTCCCBCCCEEEEEECSSSSCEEEEEEECC
T ss_pred --CCEEEEEECCCC-----CCceEc--ccccccCCCCcccccceEECCcEEEecccCCCCceEEEEECC
Confidence 134678888884 899986 3444321 121 11357788873211 13589999875
|
| >2w20_A Sialidase A; secreted, cell WALL, hydrolase, glycosidase, neuraminidase, peptidoglycan-anchor; HET: MES; 1.49A {Streptococcus pneumoniae} PDB: 2vvz_A* 3h71_A 3h72_A* 3h73_A* 2ya8_A* 2ya5_A* 2ya6_A* 2ya7_A* 2ya4_A* | Back alignment and structure |
|---|
Probab=92.92 E-value=0.35 Score=51.00 Aligned_cols=124 Identities=21% Similarity=0.206 Sum_probs=68.8
Q ss_pred EEEEecC-ccCeeecceeccCCCCcCCCcE---EeeeEEEccC----CeEEE-EEeccCC---CccceEEEEEEcCCCCC
Q 011094 162 GHAVSAD-LIHWLYLPIAMVPDQWYDINGV---WTGSATILPD----GQIVM-LYTGSTD---KSVQVQNLAYPADPSDP 229 (494)
Q Consensus 162 GHA~S~D-LvhW~~~p~AL~Pd~~~D~~Gv---~SGSavv~~d----G~~~~-~YTG~~~---~~~q~q~lA~S~D~~d~ 229 (494)
-...|+| .++|.. |..|.+...-+.... -.|+.++..+ |++++ +|+.... .+.....+.+|+|.+
T Consensus 217 ~~~~S~D~G~TWs~-p~~l~~~~~~~~~~f~~~gpg~gI~l~d~~~~GrLv~p~~~~~~~~~~~g~~~~~v~~SdD~G-- 293 (471)
T 2w20_A 217 WMSYSDDDGKTWSA-PQDITPMVKADWMKFLGVGPGTGIVLRNGPHKGRILIPVYTTNNVSHLNGSQSSRIIYSDDHG-- 293 (471)
T ss_dssp EEEEESSTTSSCCC-CEECHHHHCCTTCSCEEECCEECEECCSSTTTTCEEEEEEECCTTTHHHHCCEEEEEEESSTT--
T ss_pred EEEEECCCcCcCCC-CcccCcccccccccccccCCcceEEecCCCcCCeEEEEEEEeccccCCCCcEEEEEEEECCCC--
Confidence 3467777 899986 333332110011111 1344455566 88776 4543211 122456788999976
Q ss_pred CcceEEEcCCCceecCC--CCC-------C--CCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEEeCC-CCCCEEc
Q 011094 230 LLLDWVKYPGNPVLVPP--RHI-------G--PKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTD-FKTYELL 296 (494)
Q Consensus 230 lL~~W~K~~~nPVi~~p--~g~-------~--~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~D-l~~W~~~ 296 (494)
.+|+... ++-... .+. . .....+|.++ .-.+|+.+|+... ..|.+.+|+|.| ..+|+..
T Consensus 294 --~TW~~~~--~v~~~~~~~g~~~~~~~~~~~~~~~~ep~vv-e~~dG~L~~~~R~---~~G~~~v~~S~DgG~TWs~~ 364 (471)
T 2w20_A 294 --KTWHAGE--AVNDNRQVDGQKIHSSTMNNRRAQNTESTVV-QLNNGDVKLFMRG---LTGDLQVATSKDGGVTWEKD 364 (471)
T ss_dssp --SSCEECC--CTTTTEEETTEEECTTTCCCGGGCCCSEEEE-ECTTSCEEEEECC---SSSEEEEEEESSSSSSCCSC
T ss_pred --CCcccCC--ccCcccccCccccccccccccCcCccCCEEE-EcCCCeEEEEEEe---CCCCEEEEEEcCCCcCCCCc
Confidence 8999853 221110 110 0 0124688884 4468888877643 246677999988 6999864
|
| >4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=92.26 E-value=2.7 Score=45.11 Aligned_cols=166 Identities=18% Similarity=0.089 Sum_probs=88.9
Q ss_pred CCEEEEEEeeCCCCC-CC-CCcEEEEEEecC-ccCeeecceeccCCC----CcCCCcEEeeeEEEcc-CCeEEEEEeccC
Q 011094 140 KGWYHLFYQYNPDSA-VW-GNITWGHAVSAD-LIHWLYLPIAMVPDQ----WYDINGVWTGSATILP-DGQIVMLYTGST 211 (494)
Q Consensus 140 ~G~YHLFYQ~nP~~~-~w-g~~~WGHA~S~D-LvhW~~~p~AL~Pd~----~~D~~Gv~SGSavv~~-dG~~~~~YTG~~ 211 (494)
+|....||-..+.+. .+ +++......|+| ..+|.....++.... .-..++++.++.++++ +|++++||+...
T Consensus 191 ~G~Lla~~~~r~~~~~D~~~~i~i~~~rS~DgG~tWs~~~~v~~~~~~~~~~~~~~~~~nP~lvvD~~tG~I~L~~~~~~ 270 (523)
T 4fj6_A 191 NGTLLGVYDIRYNSSVDLQEKIDIGVSRSTDKGQTWEPMRVAMTFKQTDGLPHGQNGVGDPSILVDEKTNTIWVVAAWTH 270 (523)
T ss_dssp TSCEEEEEEEESSCSCCSSSSEEEEEEEESSTTSSCCCCEEEECCTTGGGCCGGGSCEEEEEEEECTTTCCEEEEEEECC
T ss_pred CCcEEEEEeceeccCCCCcCcEEEEEEEeCCCCCEeCCcEEeecccccccCccccccccCceEEEECCCCeEEEEEEecc
Confidence 677778875544333 22 456667788888 579986544333221 1124689999998875 799999987421
Q ss_pred C----------------CccceEEEEEEcCCCCCCcceEEEcCCCceec--CCCCCCCCCCCCCeeEeecCCCeEEEEEe
Q 011094 212 D----------------KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLV--PPRHIGPKDFRDPTTAWAGPDGKWRLTIG 273 (494)
Q Consensus 212 ~----------------~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~--~p~g~~~~~fRDP~V~w~~~dg~w~MviG 273 (494)
. ......++..|.|.| ++|.+... +.. ..+.+ ..-+.-|----.-.+|++++-+-
T Consensus 271 g~~~~~~w~~~~~g~~~~~t~~~~~~~S~D~G----~TWs~p~~--l~~~~~~~~~-~~~~~g~G~GI~l~dGrLv~P~~ 343 (523)
T 4fj6_A 271 GMGNERAWWNSMPGMTPDETAQLMLVKSEDDG----KTWSEPIN--ITSQVKDPSW-YFLLQGPGRGITMQDGTLVFPIQ 343 (523)
T ss_dssp SCTTSCGGGTCCSSSSTTTSCEEEEEEESSTT----SSCCCCEE--CHHHHCCTTC-SEEEECSEECEECTTSCEEEEEE
T ss_pred cccccccccccccCCCCCcceEEEEEEcCCCC----ccCCCCee--ecccccCCcc-eEEecCCCcceEEeCCeEEEEEE
Confidence 0 011345788999986 89976311 111 11111 00011221000125788765544
Q ss_pred eec-CCeeEEEEEEeCC-CCCCEEcCcccccCCCCCceEeccEEEec
Q 011094 274 SKI-GKTGISLVYQTTD-FKTYELLDEYLHAVPGTGMWECVDFYPVA 318 (494)
Q Consensus 274 a~~-~~~G~v~lY~S~D-l~~W~~~~~ll~~~~~~gmwECPdlf~l~ 318 (494)
... ++....+++.|+| .++|+...... .+..| |.+.++.
T Consensus 344 ~~~~~g~~~s~i~~S~D~G~TW~~~~~~~-----~~~~e-~~vve~~ 384 (523)
T 4fj6_A 344 FIDATRVPNAGIMYSKDRGKTWHLHNLAR-----TNTTE-AQVAEVE 384 (523)
T ss_dssp EECTTSCEEEEEEEESSTTSSCEECCCSE-----ETEEE-EEEEEEE
T ss_pred EEcCCCCEEEEEEEECCCCCeEEECCCCC-----ccccC-CEEEEec
Confidence 332 2222334445555 79999865432 12233 4566664
|
| >1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ... | Back alignment and structure |
|---|
Probab=91.22 E-value=1.5 Score=48.32 Aligned_cols=151 Identities=18% Similarity=0.225 Sum_probs=83.7
Q ss_pred CcccCCccceEECCEEEEEE-eeCCCCCC----CCCcEEEE------E-EecC-c-----cCeeecceeccCCC--CcCC
Q 011094 128 NWMNDPNGPLFYKGWYHLFY-QYNPDSAV----WGNITWGH------A-VSAD-L-----IHWLYLPIAMVPDQ--WYDI 187 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFY-Q~nP~~~~----wg~~~WGH------A-~S~D-L-----vhW~~~p~AL~Pd~--~~D~ 187 (494)
+-..||. ++..+|+-+||+ .|+..... ++...|+. . .|+| . |+|.. |..|.+.- .+..
T Consensus 106 ~~v~~PT-tVv~gg~I~LL~g~y~~~~~~~~~~~~~~~~~llLVkG~V~~S~D~Gktsk~ItWs~-p~~L~~~~~~~~~~ 183 (648)
T 1ms9_A 106 SRVVDPT-VIVKGNKLYVLVGSYNSSRSYWTSHGDARDWDILLAVGEVTKSTAGGKITASIKWGS-PVSLKEFFPAEMEG 183 (648)
T ss_dssp CEEEEEE-EEEETTEEEEEEEEESSCCSCGGGCSSSTTEEEEEEEEEEEEECGGGSCEEEEEECC-CEECGGGCCSBSSS
T ss_pred eEeeccc-eeeecccEEEEEEeecCCcccccccccCCCcceEEEEeeeccccccccccceeeccC-cccCcccccccccc
Confidence 3456787 666889888888 45443221 22234554 2 3665 3 47975 33333221 1111
Q ss_pred ---CcEE--eeeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEee
Q 011094 188 ---NGVW--TGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWA 262 (494)
Q Consensus 188 ---~Gv~--SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~ 262 (494)
.+.. .|+.|+..||++++=.-+....+..+-.+-+|+|.+ .+|+.... + ++ ....||.|+ .
T Consensus 184 ~~~~~~~~GgGsGI~m~dGtLVfPv~~~~~~g~~~s~iiySdD~G----~TW~ls~~--~--~~-----~gc~EpsVv-E 249 (648)
T 1ms9_A 184 MHTNQFLGGAGVAIVASNGNLVYPVQVTNKKKQVFSKIFYSEDEG----KTWKFGKG--R--SA-----FGCSEPVAL-E 249 (648)
T ss_dssp SBEEEEEECSEECEECTTSCEEEEEEEEETTCCEEEEEEEESSTT----SSCEECSC--C--CC-----TTEEEEEEE-E
T ss_pred ceeEEEEecCCceEEecCCcEEEEEEEEcccccceeeEEEecCCC----CCEEECCC--C--CC-----CCccceEEE-E
Confidence 1111 355677789998752211112233444567898875 89998632 1 11 245799986 2
Q ss_pred cCCCeEEEEEeeecCCeeEEEEEEeCC-CCCCEEcCc
Q 011094 263 GPDGKWRLTIGSKIGKTGISLVYQTTD-FKTYELLDE 298 (494)
Q Consensus 263 ~~dg~w~MviGa~~~~~G~v~lY~S~D-l~~W~~~~~ 298 (494)
-+|+-+|..... .|...+|+|.| ..+|+....
T Consensus 250 -wdG~Lmm~~R~~---~g~R~Vy~S~D~G~TWte~~~ 282 (648)
T 1ms9_A 250 -WEGKLIINTRVD---YRRRLVYESSDMGNTWLEAVG 282 (648)
T ss_dssp -ETTEEEEEEEET---TSCCCEEEESSTTSSCEECTT
T ss_pred -ECCEEEEEEEcc---CCcEEEEEecCCCcccccccc
Confidence 268854444332 24455899988 699997654
|
| >2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A* | Back alignment and structure |
|---|
Probab=91.08 E-value=2.1 Score=47.32 Aligned_cols=116 Identities=15% Similarity=0.140 Sum_probs=67.8
Q ss_pred EEEEecC-ccCeeecceeccCCCCcCCCcEEe--eeEEEccC----CeEEE-EEeccCCCccceEEEEEEcCCCCCCcce
Q 011094 162 GHAVSAD-LIHWLYLPIAMVPDQWYDINGVWT--GSATILPD----GQIVM-LYTGSTDKSVQVQNLAYPADPSDPLLLD 233 (494)
Q Consensus 162 GHA~S~D-LvhW~~~p~AL~Pd~~~D~~Gv~S--GSavv~~d----G~~~~-~YTG~~~~~~q~q~lA~S~D~~d~lL~~ 233 (494)
-...|+| ..+|.... .|.+...-.....+. |+.+...+ |++++ .|+... ....+.+|+|++ .+
T Consensus 429 ~v~~S~DgG~TWs~p~-~l~~~~~~~~~~~~~gpG~gI~l~d~~~~GrLv~p~~~~~~----~~s~i~~SdDgG----~T 499 (679)
T 2sli_A 429 AMRYSDDEGASWSDLD-IVSSFKPEVSKFLVVGPGIGKQISTGENAGRLLVPLYSKSS----AELGFMYSDDHG----DN 499 (679)
T ss_dssp EEEEESSTTSSCCCCE-ECGGGCCTTCSEEEECSEECEECCSSTTTTCEEEEEEEESS----CSEEEEEESSTT----SS
T ss_pred EEEEeCCCCccCCCCc-ccCcccCccccceecCCCceEEecCCCCCCEEEEEEEecCC----CEEEEEEECCCC----Cc
Confidence 3456776 78998643 232211101122222 44455555 88776 444321 234677999986 89
Q ss_pred EEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEEeCC-CCCCEEcC
Q 011094 234 WVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTD-FKTYELLD 297 (494)
Q Consensus 234 W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~D-l~~W~~~~ 297 (494)
|++... + .|.+ ....+|.++ ...+|+.+|+.... .|.+.+|+|.| ..+|+...
T Consensus 500 W~~~~~--~--~p~~---~~~~e~~vv-e~~dG~L~~~~R~~---~G~~~v~~S~DgG~TWt~~~ 553 (679)
T 2sli_A 500 WTYVEA--D--NLTG---GATAEAQIV-EMPDGSLKTYLRTG---SNCIAEVTSIDGGETWSDRV 553 (679)
T ss_dssp CEEEEC--C--CCCS---CCCCCEEEE-ECTTSCEEEEECCS---SSSCEEEEESSTTSSCCCCE
T ss_pred eEeCcc--C--CCCC---CCccceEEE-EeCCCEEEEEEEeC---CCCEEEEEEcCCCcCCCCCc
Confidence 998632 1 1212 245788884 34678888876542 35667899998 69998654
|
| >1so7_A Sialidase 2; neuraminidase, ganglioside, sugar-induced form; 1.49A {Homo sapiens} SCOP: b.68.1.1 PDB: 1snt_A 1vcu_A* 2f0z_A* 2f10_A* 2f11_A* 2f12_A* 2f13_A* 2f28_A 2f29_A* 2f24_A 2f25_A* 2f26_A 2f27_A* | Back alignment and structure |
|---|
Probab=90.79 E-value=0.68 Score=46.76 Aligned_cols=148 Identities=17% Similarity=0.151 Sum_probs=80.2
Q ss_pred ccCCccceEE--CCEEEEEEeeCCCCC-C-------CCCcEEEEEEecC-ccCeeecceeccCCC--C-c-CCCcEE--e
Q 011094 130 MNDPNGPLFY--KGWYHLFYQYNPDSA-V-------WGNITWGHAVSAD-LIHWLYLPIAMVPDQ--W-Y-DINGVW--T 192 (494)
Q Consensus 130 mNDPNG~~y~--~G~YHLFYQ~nP~~~-~-------wg~~~WGHA~S~D-LvhW~~~p~AL~Pd~--~-~-D~~Gv~--S 192 (494)
..+|. +++. +|+-+|||.+.+... . ..........|+| ..+|...- .|.+.. . . +-.... .
T Consensus 86 ~~~P~-~v~d~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~DgG~TW~~~~-~l~~~~~g~~~~~~~~~~~~p 163 (382)
T 1so7_A 86 SMNPC-PLYDAQTGTLFLFFIAIPGQVTEQQQLQTRANVTRLCQVTSTDHGRTWSSPR-DLTDAAIGPAYREWSTFAVGP 163 (382)
T ss_dssp EEEEE-EEECTTTCCEEEEEEEEESSCCHHHHHCTTCCCCEEEEEEESSTTSSCCCCE-ECHHHHHGGGGGGEEEEEECS
T ss_pred cccce-EEEECCCCcEEEEEEEecCCCccceeecCCCCccEEEEEEEcCCCCcCCCCc-cCChhhcCCCCCCceeeccCC
Confidence 44675 5554 588889987654321 1 1123345677876 88998632 222110 0 0 001111 2
Q ss_pred eeEEEccC--CeEEE-EEeccCC----CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeE-ee-c
Q 011094 193 GSATILPD--GQIVM-LYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA-WA-G 263 (494)
Q Consensus 193 GSavv~~d--G~~~~-~YTG~~~----~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~-w~-~ 263 (494)
|+.+...+ |++++ .|..... .......+.+|+|.+ .+|++...-+ . ....+.++ +. .
T Consensus 164 g~gi~l~~~~G~lv~p~~~~~~~~~~~~~~~~~~~~~S~D~G----~tW~~~~~~~-----~-----~~~~~~~~~~~~~ 229 (382)
T 1so7_A 164 GHCLQLNDRARSLVVPAYAYRKLHPIQRPIPSAFCFLSHDHG----RTWARGHFVA-----Q-----DTLECQVAEVETG 229 (382)
T ss_dssp SCCEECCSTTCCEEEEEEEEECCSSSSCCEEEEEEEEESSTT----SSCEECCCCS-----B-----SEEEEEEEEEEC-
T ss_pred CcEeecccCCCcEEEEEEEecccccccCCCceeEEEEECCCC----ceeEcCcccC-----C-----CCCccEEEEEEEC
Confidence 35556677 88877 5554322 113455678999976 8999863211 0 11122332 21 2
Q ss_pred CCCeEEEEEeeecCCeeEEEEEEeCC-CCCCEEc
Q 011094 264 PDGKWRLTIGSKIGKTGISLVYQTTD-FKTYELL 296 (494)
Q Consensus 264 ~dg~w~MviGa~~~~~G~v~lY~S~D-l~~W~~~ 296 (494)
.+|+.+|+.... .|...+|+|.| .++|+..
T Consensus 230 ~dg~l~~~~r~~---~g~~~v~~S~D~G~tW~~~ 260 (382)
T 1so7_A 230 EQRVVTLNARSH---LRARVQAQSTNDGLDFQES 260 (382)
T ss_dssp -CEEEEEEEEES---SSEEEEEEESSTTSSCCCC
T ss_pred CCCEEEEEEecC---CCCEEEEEEcCCCCCCCCC
Confidence 578877776543 24667899988 6999864
|
| >1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* | Back alignment and structure |
|---|
Probab=89.20 E-value=1.6 Score=46.78 Aligned_cols=101 Identities=18% Similarity=0.119 Sum_probs=63.4
Q ss_pred EEeeeEEEccCCeEEEEEeccCCC----ccceEEEEEEcCCCCCCcceEEEcCCCceecCCC-CCCCCCCCCCeeEeecC
Q 011094 190 VWTGSATILPDGQIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR-HIGPKDFRDPTTAWAGP 264 (494)
Q Consensus 190 v~SGSavv~~dG~~~~~YTG~~~~----~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~-g~~~~~fRDP~V~w~~~ 264 (494)
.-.++.+..++|.++++|.+.... ....+.+..|.|++ .+|.+. .++.... ......+.||.++....
T Consensus 21 ~~~P~L~~~~~G~lla~~~~~~~~~~~~~~~~i~~~rS~DgG----~TW~~~---~~l~~~~~~~~~~~~~~P~~~~d~~ 93 (601)
T 1w8o_A 21 YRIPALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGG----RTWGEQ---QVVSAGQTTAPIKGFSDPSYLVDRE 93 (601)
T ss_dssp EEEEEEEECTTSCEEEEEEECTTSCSTTSCCEEEEEEESSTT----SSCCCC---EEEECCBCSSSCBEEEEEEEEECTT
T ss_pred EeEeeEEECCCCCEEEEEcccCCCCCCCCcceEEEEEeCCCC----CCCCCC---EEEecCccCCCCCccccceEEEECC
Confidence 346777766799999999987542 12246788999986 899864 2232211 01123467898754435
Q ss_pred CCeEEEEEeeecC---------------CeeEEEEEEeCC-CCCCEEcC
Q 011094 265 DGKWRLTIGSKIG---------------KTGISLVYQTTD-FKTYELLD 297 (494)
Q Consensus 265 dg~w~MviGa~~~---------------~~G~v~lY~S~D-l~~W~~~~ 297 (494)
+|+.+|+++.... ....+.+++|+| .++|+...
T Consensus 94 ~g~i~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~S~D~G~TWs~~~ 142 (601)
T 1w8o_A 94 TGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRT 142 (601)
T ss_dssp TCCEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEESSTTSSCEEEE
T ss_pred CCeEEEEEEeecCCCccccccCCCccCCceEEEEEEEecCCCCCCCCcc
Confidence 7888888764210 113466778876 79998754
|
| >2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A* | Back alignment and structure |
|---|
Probab=89.11 E-value=3.5 Score=45.67 Aligned_cols=114 Identities=16% Similarity=0.176 Sum_probs=62.7
Q ss_pred EEEecC-ccCeeecceeccCCCCcCCCcEE--eeeEEE-ccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcC
Q 011094 163 HAVSAD-LIHWLYLPIAMVPDQWYDINGVW--TGSATI-LPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYP 238 (494)
Q Consensus 163 HA~S~D-LvhW~~~p~AL~Pd~~~D~~Gv~--SGSavv-~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~ 238 (494)
...|+| ..+|... ..|.+...-.....+ .|+.++ ..+|++++.+... ....+.+|+|.+ .+|++..
T Consensus 450 v~rS~DgG~TWs~p-~~l~~~~~~~~~~~~~~pg~GI~~~~~GrLv~p~~~~-----~~s~v~~S~DgG----~TW~~~~ 519 (686)
T 2jkb_A 450 MTTSQNRGESWEQF-KLLPPFLGEKHNGTYLCPGQGLALKSSNRLIFATYTS-----GELTYLISDDSG----QTWKKSS 519 (686)
T ss_dssp EEEESSTTSCCCCC-EECCCSSCTTSCCCEECSEECEECTTSSCEEEEEEET-----TEEEEEEESSTT----SSCEEEE
T ss_pred EEEECCCCCcCCCC-eecccccCcccceeeeCCCcceEEccCCeEEEEEecC-----CcEEEEEECCCC----CeeEeCc
Confidence 345666 7789864 233221110111112 223333 4588887754432 234678999986 8999863
Q ss_pred CCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEEeCC-CCCCEEcC
Q 011094 239 GNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTD-FKTYELLD 297 (494)
Q Consensus 239 ~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~D-l~~W~~~~ 297 (494)
.+. |.+ ...-.|.++ ...+|+.+|++... .|.+.+|+|.| ..+|+...
T Consensus 520 --~~~--p~~---~~~~e~~iv-el~dG~L~~~~R~~---~G~~~v~~S~DgG~TWs~~~ 568 (686)
T 2jkb_A 520 --ASI--PFK---NATAEAQMV-ELRDGVIRTFFRTT---TGKIAYMTSRDSGETWSKVS 568 (686)
T ss_dssp --EEC--SCS---SCCCCEEEE-EEETTEEEEEECCS---SSSCEEEEESSTTSSCCCCE
T ss_pred --ccC--CCC---CCceeeEEE-EecCCEEEEEEEcC---CCcEeEEEeCCCCCCCcccc
Confidence 221 211 123356663 23578888775432 24456889988 69998653
|
| >2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A* | Back alignment and structure |
|---|
Probab=83.09 E-value=13 Score=37.52 Aligned_cols=89 Identities=15% Similarity=0.129 Sum_probs=55.3
Q ss_pred CCEEEEEEeeCCC-CCCCCCcEEEEEEec---Cc----cCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEeccC
Q 011094 140 KGWYHLFYQYNPD-SAVWGNITWGHAVSA---DL----IHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGST 211 (494)
Q Consensus 140 ~G~YHLFYQ~nP~-~~~wg~~~WGHA~S~---DL----vhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~ 211 (494)
+|..-.||--.+. ...++.+......|+ |. .+|.. +..|.... ..++...+.+++++|+++|+|+...
T Consensus 48 ~G~l~A~~e~~~~~~~d~g~~~i~~~rS~~~~D~G~~~~tW~~-~~~l~~~~---~~~~~~Pt~v~~~~g~I~l~~~~~~ 123 (386)
T 2xzi_A 48 TGRILAFAEGRRHTNQDFGDINLVYKRTKTTANNGASPSDWEP-LREVVGSG---AGTWGNPTPVVDDDNTIYLFLSWNG 123 (386)
T ss_dssp TSCEEEEEEEESSSSCSSSSEEEEEEEBSSSSSTTCSGGGBCC-CEEEECCS---SSEEEEEEEEECTTSCEEEEEEEEC
T ss_pred CCcEEEEEEeeeCCCCCCCceeEEEEEeeeecCCCcCceeccC-cEEEeeCC---CCcccccEEEEeCCCCEEEEEEecc
Confidence 5666667644333 223466777888898 86 79985 34444432 2456667777655899999995211
Q ss_pred ------CC-----------------ccceEEEEEEcCCCCCCcceEEE
Q 011094 212 ------DK-----------------SVQVQNLAYPADPSDPLLLDWVK 236 (494)
Q Consensus 212 ------~~-----------------~~q~q~lA~S~D~~d~lL~~W~K 236 (494)
.+ ......+..|.|.+ ++|.+
T Consensus 124 g~y~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~S~D~G----~TWs~ 167 (386)
T 2xzi_A 124 ATYSQNGKDVLPDGTVTKKIDSTWEGRRHLYLTESRDDG----NTWSK 167 (386)
T ss_dssp TTEESSSCCBCTTSCBCEECCSSTTTSCEEEEEEESSTT----SCCCC
T ss_pred ccccccCcceeccCceecccccccccccEEEEEEECCCC----ccCCC
Confidence 10 11245678898875 89975
|
| >1so7_A Sialidase 2; neuraminidase, ganglioside, sugar-induced form; 1.49A {Homo sapiens} SCOP: b.68.1.1 PDB: 1snt_A 1vcu_A* 2f0z_A* 2f10_A* 2f11_A* 2f12_A* 2f13_A* 2f28_A 2f29_A* 2f24_A 2f25_A* 2f26_A 2f27_A* | Back alignment and structure |
|---|
Probab=82.42 E-value=4 Score=41.03 Aligned_cols=101 Identities=10% Similarity=0.092 Sum_probs=60.0
Q ss_pred EE-eeeEE-EccCCeEEEEEeccCCC---ccceEEEEEEcCCCCCCcc----eEEEcCCCceecCCCCCCCCCCCCCeeE
Q 011094 190 VW-TGSAT-ILPDGQIVMLYTGSTDK---SVQVQNLAYPADPSDPLLL----DWVKYPGNPVLVPPRHIGPKDFRDPTTA 260 (494)
Q Consensus 190 v~-SGSav-v~~dG~~~~~YTG~~~~---~~q~q~lA~S~D~~d~lL~----~W~K~~~nPVi~~p~g~~~~~fRDP~V~ 260 (494)
+| .++.+ ..++|.+++++.+.... ....+.+..|.|.+ . +|++. .++... ......+++|.++
T Consensus 21 s~riP~Lv~~~~~G~l~a~~e~~~~~~~~~~~~i~~~rS~D~G----~~~~~tW~~~---~~~~~~-~~~~~~~~~P~~v 92 (382)
T 1so7_A 21 AYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYDA----PTHQVQWQAQ---EVVAQA-RLDGHRSMNPCPL 92 (382)
T ss_dssp CEEEEEEEEETTTTEEEEEEEECC-------CEEEEEEEEEEG----GGTEEEECCC---EECTTS-CCTTEEEEEEEEE
T ss_pred EEEeCeEEEECCCCeEEEEEccCcCCCCCCCCEEEEEEeeeCC----ccccceeCCc---EEeccC-CCCCCccccceEE
Confidence 44 46666 56799999999886531 11225677888875 7 99753 222221 1112346799885
Q ss_pred eecCCCeEEEEEeeec------------CCeeEEEEEEeCC-CCCCEEcCc
Q 011094 261 WAGPDGKWRLTIGSKI------------GKTGISLVYQTTD-FKTYELLDE 298 (494)
Q Consensus 261 w~~~dg~w~MviGa~~------------~~~G~v~lY~S~D-l~~W~~~~~ 298 (494)
....+|+-+|+++... .....+.+++|+| .++|+....
T Consensus 93 ~d~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~DgG~TW~~~~~ 143 (382)
T 1so7_A 93 YDAQTGTLFLFFIAIPGQVTEQQQLQTRANVTRLCQVTSTDHGRTWSSPRD 143 (382)
T ss_dssp ECTTTCCEEEEEEEEESSCCHHHHHCTTCCCCEEEEEEESSTTSSCCCCEE
T ss_pred EECCCCcEEEEEEEecCCCccceeecCCCCccEEEEEEEcCCCCcCCCCcc
Confidence 5434688777776431 0123466888876 789986433
|
| >3sil_A Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1.05A {Salmonella typhimurium} SCOP: b.68.1.1 PDB: 1dim_A* 1dil_A* 2sil_A 2sim_A* | Back alignment and structure |
|---|
Probab=80.42 E-value=3.8 Score=42.10 Aligned_cols=147 Identities=17% Similarity=0.262 Sum_probs=81.3
Q ss_pred cccCCccceEE--CC--EEEEEEe-eCCCCCCC---------CCcEEEEEEecC-ccCeeecceec---c--CCCCcCCC
Q 011094 129 WMNDPNGPLFY--KG--WYHLFYQ-YNPDSAVW---------GNITWGHAVSAD-LIHWLYLPIAM---V--PDQWYDIN 188 (494)
Q Consensus 129 wmNDPNG~~y~--~G--~YHLFYQ-~nP~~~~w---------g~~~WGHA~S~D-LvhW~~~p~AL---~--Pd~~~D~~ 188 (494)
-..||. +++. .| +-+||+. |+-....| .....-..+|+| .++|.+..... . +..+ .
T Consensus 94 ~v~~Pt-~vv~~~tG~~~I~llvg~~~~~~~~~~~~~~~~~~~~~~l~lv~S~D~G~tWs~~~~~~~~~~~~~~~~---~ 169 (379)
T 3sil_A 94 RVMDPT-CIVANIQGRETILVMVGKWNNNDKTWGAYRDKAPDTDWDLVLYKSTDDGVTFSKVETNIHDIVTKNGTI---S 169 (379)
T ss_dssp EEEEEE-EEEEEETTEEEEEEEEEEESSCCSCGGGCCSSSSCTTCEEEEEEESSTTSCCEEECCSHHHHHHHHCSE---E
T ss_pred eEecCc-eEEeCCCCCeeEEEEEEeecCCCcceeeccccCCCCceeEEEEEccCCCCcCCCCccccccccccccee---e
Confidence 356787 4444 47 8777753 33222111 112233566765 79998732111 0 1111 1
Q ss_pred cEE--eeeEEEccCCeEEE-E-EeccCC-CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeec
Q 011094 189 GVW--TGSATILPDGQIVM-L-YTGSTD-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAG 263 (494)
Q Consensus 189 Gv~--SGSavv~~dG~~~~-~-YTG~~~-~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~ 263 (494)
+.+ .|+.|+..||++++ . ++-..+ ....+-.+-+|+| + .+|+.... + . + ....+|.|+ .
T Consensus 170 ~~~~g~G~GI~l~~G~Lv~P~~~~~~~~~~~~~~s~~iyS~D-G----~tW~~~~~--~-~-~-----~~~~ep~vv-E- 233 (379)
T 3sil_A 170 AMLGGVGSGLQLNDGKLVFPVQMVRTKNITTVLNTSFIYSTD-G----ITWSLPSG--Y-C-E-----GFGSENNII-E- 233 (379)
T ss_dssp EEEECSEECEECTTSCEEEEEEEEECTTSSCSEEEEEEEESS-S----SSEECCSC--C-E-E-----CTTCCEEEE-E-
T ss_pred eecCCCCceEEEcCCcEEEEEEEeeccCCCCCEEEEEEEcCC-C----CCeEECCC--C-C-C-----ccCCCCEEE-E-
Confidence 122 45667788999775 2 222111 2233455678988 5 89986532 1 1 1 245799986 2
Q ss_pred CCCeEEEEEeeecCCeeEEEEEEeCC-CCCCEEcCcc
Q 011094 264 PDGKWRLTIGSKIGKTGISLVYQTTD-FKTYELLDEY 299 (494)
Q Consensus 264 ~dg~w~MviGa~~~~~G~v~lY~S~D-l~~W~~~~~l 299 (494)
-+|+.+|+... .|...+|+|.| ..+|+....+
T Consensus 234 ~dG~L~m~~R~----~g~r~v~~S~D~G~tWt~~~~~ 266 (379)
T 3sil_A 234 FNASLVNNIRN----SGLRRSFETKDFGKTWTEFPPM 266 (379)
T ss_dssp ETTEEEEEECC----SSBCBCEEESSSSSCCEECTTT
T ss_pred ECCEEEEEEEe----CCCEEEEEEcCCCccCCCCccc
Confidence 26888887754 34455788877 5999986443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 494 | ||||
| d1y4wa2 | 353 | b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awa | 9e-89 | |
| d1uypa2 | 294 | b.67.2.3 (A:1-294) Beta-fructosidase (invertase), | 9e-75 | |
| d1oyga_ | 440 | b.67.2.2 (A:) Levansucrase {Bacillus subtilis [Tax | 5e-42 | |
| d1jfua_ | 176 | c.47.1.10 (A:) Membrane-anchored thioredoxin-like | 0.003 |
| >d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} Length = 353 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Score = 273 bits (699), Expect = 9e-89
Identities = 93/359 (25%), Positives = 147/359 (40%), Gaps = 50/359 (13%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
R +HF P+KNWMNDPNG L++ G YHLF+QYNP WGNI+WGHA+S DL HW P+
Sbjct: 8 RGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEKPV 67
Query: 178 AMVPDQWYDI--NGVWTGSATILPDG----------QIVMLYTG------------STDK 213
A++ + ++GSA + +V +YT + +
Sbjct: 68 ALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQE 127
Query: 214 SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP---RHIGPKDFRDPTTAWAGPDGKWRL 270
Q Q++AY D L NPV+ P ++FRDP W KW +
Sbjct: 128 DQQSQSIAY---SLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQKWVV 184
Query: 271 TIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSAT 330
I + +Y + + K ++L+ E+ G+WEC + ++
Sbjct: 185 VTS--IAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDS--------- 233
Query: 331 GPGIKHVLKASLDDTKV-------DHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGR-Y 382
G K V+ + L+ Y +G ++ D D+G +
Sbjct: 234 GNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGTTFTPDADTVYPGNSTANWMDWGPDF 293
Query: 383 YASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTV-LYDNKTGSNVVQWP 440
YA+ + + GW+N ++ W S IPR + L + + +VQ P
Sbjct: 294 YAAAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQP 352
|
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 294 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Score = 235 bits (600), Expect = 9e-75
Identities = 100/327 (30%), Positives = 152/327 (46%), Gaps = 39/327 (11%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
+ ++HF P WMNDPNG +F+KG YH+FYQYNP WGNI WGHAVS DL+HW +LP+
Sbjct: 3 KPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPV 62
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKY 237
A+ + +GV++GSA DG++ ++YT D + LD+VKY
Sbjct: 63 ALY--PDDETHGVFSGSAVE-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKY 119
Query: 238 PGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISLVYQTTDFKTYELL 296
GNPV+ P G FRDP +G+WR+ +GS K G L+Y + D ++
Sbjct: 120 DGNPVISKPPEEGTHAFRDPKVNR--SNGEWRMVLGSGKDEKIGRVLLYTSDDLFHWKYE 177
Query: 297 DEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYN 356
+ T EC D + G K +L S+ T +++G
Sbjct: 178 GA-IFEDETTKEIECPDLVRI---------------GEKDILIYSITSTNSVLFSMGEL- 220
Query: 357 PANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWINETDTES--DDLE 413
+ +V D+G +YA+++F+ R +V GW+
Sbjct: 221 --------KEGKLNVEKRGLLDHGTDFYAAQTFFGT--DRVVVIGWLQSWLRTGLYPTKR 270
Query: 414 KGWASVQTIPRTVLYDNKTGSNVVQWP 440
+GW V ++PR + +N + P
Sbjct: 271 EGWNGVMSLPRELYVENNE---LKVKP 294
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} Length = 440 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Score = 153 bits (387), Expect = 5e-42
Identities = 44/391 (11%), Positives = 101/391 (25%), Gaps = 90/391 (23%)
Query: 130 MNDPNG-PLFYKGWYHLFYQYNPDSAVWGN---ITWGHAVSADLIHWLYLPIAMVPDQWY 185
+ + +G Y G++ +F + + + W +
Sbjct: 57 LQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKF 116
Query: 186 DINGV--------WTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADP--SDPLLLDWV 235
D N W+GSAT DG+I + YT + K Q L + L+
Sbjct: 117 DANDSILKDQTQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNIN 176
Query: 236 KYPGNPVLVPPR-----------------HIGPKDFRDP------TTAWAGPDGKWRLTI 272
+ RDP + +
Sbjct: 177 GVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHYVEDKGHKYLVFEANTGTED 236
Query: 273 GSK-----------------------------------IGKTGISLVYQTTDFKTYELLD 297
G + + + ++ D+ +++
Sbjct: 237 GYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKVMK 296
Query: 298 EYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTY-- 355
+ + T E + + + NG L T K ++D + + Y
Sbjct: 297 PLIASNTVTDEIERANVFKM--NGKWYLFTD------SRGSKMTIDGITSNDIYMLGYVS 348
Query: 356 NPANDKWTPDNPEE-DVGIGLKWDYGRY-YASKSFYDPYKKRRIVWGWINETDTESDDLE 413
N + P N + + L + + Y+ + ++ ++ D +
Sbjct: 349 NSLTGPYKPLNKTGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRG-FYADKQ 407
Query: 414 KGWA-----SVQTIPRTVLYDNKTGSNVVQW 439
+A +++ +V+ D+ +
Sbjct: 408 STFAPSFLLNIKGKKTSVVKDSILEQGQLTV 438
|
| >d1jfua_ c.47.1.10 (A:) Membrane-anchored thioredoxin-like protein TlpA, soluble domain {Bradyrhizobium japonicum [TaxId: 375]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Membrane-anchored thioredoxin-like protein TlpA, soluble domain species: Bradyrhizobium japonicum [TaxId: 375]
Score = 36.6 bits (83), Expect = 0.003
Identities = 14/121 (11%), Positives = 29/121 (23%), Gaps = 6/121 (4%)
Query: 96 NSHLLRNIKGSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAV 155
L + +G N TW P + + ++ +P+
Sbjct: 47 KPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPK 106
Query: 156 WGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATIL--PDGQIVMLYTGSTDK 213
+ + A V I ++L P G + G +
Sbjct: 107 TFLKEANL----TRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIATIAGPAEW 162
Query: 214 S 214
+
Sbjct: 163 A 163
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 494 | |||
| d1uypa2 | 294 | Beta-fructosidase (invertase), N-terminal domain { | 100.0 | |
| d1y4wa2 | 353 | Exo-inulinase {Aspergillus awamori [TaxId: 105351] | 100.0 | |
| d1oyga_ | 440 | Levansucrase {Bacillus subtilis [TaxId: 1423]} | 99.97 | |
| d1vkda_ | 327 | Hypothetical protein TM1225 {Thermotoga maritima [ | 99.69 | |
| d1uv4a1 | 291 | Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 14 | 99.63 | |
| d1gyha_ | 318 | alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: | 99.48 | |
| d1wl7a1 | 312 | Arabinanase-TS {Bacillus thermodenitrificans [TaxI | 99.43 | |
| d1y7ba2 | 321 | Beta-D-xylosidase N-terminal domain {Clostridium a | 99.25 | |
| d1yrza2 | 317 | Beta-D-xylosidase N-terminal domain {Bacillus halo | 99.19 | |
| d2exha2 | 322 | Beta-D-xylosidase N-terminal domain {Geobacillus s | 99.18 | |
| d1vkda_ | 327 | Hypothetical protein TM1225 {Thermotoga maritima [ | 99.09 | |
| d1uv4a1 | 291 | Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 14 | 98.32 | |
| d1uypa2 | 294 | Beta-fructosidase (invertase), N-terminal domain { | 97.96 | |
| d1gyha_ | 318 | alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: | 97.68 | |
| d2b4wa1 | 310 | Hypothetical protein LmjF10.1260 {Leishmania major | 97.47 | |
| d2exha2 | 322 | Beta-D-xylosidase N-terminal domain {Geobacillus s | 97.2 | |
| d1wl7a1 | 312 | Arabinanase-TS {Bacillus thermodenitrificans [TaxI | 97.13 | |
| d1yrza2 | 317 | Beta-D-xylosidase N-terminal domain {Bacillus halo | 96.55 | |
| d1y7ba2 | 321 | Beta-D-xylosidase N-terminal domain {Clostridium a | 96.52 | |
| d1oyga_ | 440 | Levansucrase {Bacillus subtilis [TaxId: 1423]} | 95.87 | |
| d1w8oa3 | 356 | Micromonospora sialidase, N-terminal domain {Micro | 92.88 | |
| d3sila_ | 379 | Salmonella sialidase {Salmonella typhimurium, stra | 85.04 | |
| d2b4wa1 | 310 | Hypothetical protein LmjF10.1260 {Leishmania major | 84.64 | |
| d2ah2a2 | 399 | Trypanosoma sialidase {Parasitic flagellate protoz | 82.26 | |
| d1w0pa3 | 364 | Vibrio cholerae sialidase {Vibrio cholerae [TaxId: | 81.4 | |
| d1so7a_ | 374 | Sialidase 2 (Neu2) {Human (Homo sapiens) [TaxId: 9 | 80.59 |
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.7e-78 Score=608.21 Aligned_cols=284 Identities=36% Similarity=0.714 Sum_probs=251.2
Q ss_pred ccceeeeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEE
Q 011094 117 QRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSAT 196 (494)
Q Consensus 117 ~Rp~~Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSav 196 (494)
+||+|||+|++||||||||++|++|+||||||+||.++.||+++||||+|+|||||+++|+||.|+. |..|||||||+
T Consensus 2 ~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlfyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~al~p~~--d~~g~~sGsav 79 (294)
T d1uypa2 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDD--ETHGVFSGSAV 79 (294)
T ss_dssp CSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTSSSSCSCEEEEEEESSSSSCEEEEEEECCSS--TTEEEEEEEEE
T ss_pred CCccCcccCCCCCcCCCccceEECCEEEEEEecCCCCCCCCCcEEEEEEeCCcCCeEECCccccccc--CCCCeEEEEEE
Confidence 4999999999999999999999999999999999999999999999999999999999999999986 67899999997
Q ss_pred EccCCeEEEEEeccCC-----CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEE
Q 011094 197 ILPDGQIVMLYTGSTD-----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLT 271 (494)
Q Consensus 197 v~~dG~~~~~YTG~~~-----~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~Mv 271 (494)
+ .+|++++||||... ...+.|++|+|+|+ ++|+|+++|||+..++.....+||||+| |. ++|+|+|+
T Consensus 80 ~-~~g~~~~~yT~~~~~~~~~~~~~~~~~a~s~dg-----~~w~k~~~npvi~~~~~~~~~~fRDP~V-~~-~~g~w~M~ 151 (294)
T d1uypa2 80 E-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENG-----LDFVKYDGNPVISKPPEEGTHAFRDPKV-NR-SNGEWRMV 151 (294)
T ss_dssp E-ETTEEEEEEEEEECCCSSCCCEEEEEEEEESSS-----SCCEECTTCCSBCSCSSTTEEEEEEEEE-EE-ETTEEEEE
T ss_pred e-cCCeEEEEEEEeeCCCCCCcceeeeEEEECCCC-----CceEeecCCceecCCCccCccccCCCcc-cc-cCCEEEEE
Confidence 5 79999999998753 24578899999885 8999999999999877666789999999 54 58999999
Q ss_pred Eeee-cCCeeEEEEEEeCCCCCCEEcCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCCCceeEE
Q 011094 272 IGSK-IGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHY 350 (494)
Q Consensus 272 iGa~-~~~~G~v~lY~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~~~~~~Y 350 (494)
+|++ .++.|++++|+|+||++|++.+++... ...+||||||||+|+ .||||..|....+...|
T Consensus 152 ~g~~~~~~~G~i~ly~S~Dl~~W~~~g~l~~~-~~~~~~ECPdlf~l~---------------~~~vl~~s~~~~~~~~y 215 (294)
T d1uypa2 152 LGSGKDEKIGRVLLYTSDDLFHWKYEGAIFED-ETTKEIECPDLVRIG---------------EKDILIYSITSTNSVLF 215 (294)
T ss_dssp EEEEETTTEEEEEEEEESSSSSEEEEEEEEEE-TTCSCEEEEEEEEET---------------TEEEEEEEETTTTEEEE
T ss_pred EEeeecCCccEEEEEEcCCccceeEeccceeC-CCCCceeeceEEEeC---------------CeeEEEEEecCCCCeee
Confidence 9987 467899999999999999999988653 345799999999995 28999999988888999
Q ss_pred EEEEecCCCCcccCCCCCcccccceeeecC-CCcccceeecCCCCcEEEEEEccCCCCC--CCCcCCCCccCCcccEEEE
Q 011094 351 AIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTE--SDDLEKGWASVQTIPRTVL 427 (494)
Q Consensus 351 ~iG~~d~~~~~f~p~~~~~d~g~~~rlD~G-~fYA~qtf~d~~~~Rril~GW~~~~d~~--~~~~~~gWag~lslPR~l~ 427 (494)
.+|+||. ++|+++. ..++|+| +|||+|||.|. +||||||||++++.. .++...||+|+|||||||+
T Consensus 216 ~~G~~~~--~~f~~~~-------~~~lD~G~dfYA~qtf~~~--~R~i~~gW~~~~~~~~~~p~~~~gw~g~lslPRel~ 284 (294)
T d1uypa2 216 SMGELKE--GKLNVEK-------RGLLDHGTDFYAAQTFFGT--DRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELY 284 (294)
T ss_dssp EEEEEET--TEEEEEE-------EEESCCSSSCEEEEECBSC--SSEEEEEESSCTTTGGGCCGGGGTEECCBCCCEEEE
T ss_pred EeeeecC--CeEEeec-------ceEEccCCceeeccCccCC--CCEEEEEECCCCcccccCCCccCCcccceeeCEEEE
Confidence 9999986 4887653 3579999 79999999984 899999999988654 4566789999999999999
Q ss_pred EeeCCCceEEEcc
Q 011094 428 YDNKTGSNVVQWP 440 (494)
Q Consensus 428 l~~~~g~~L~q~P 440 (494)
|+ +| +|+|+|
T Consensus 285 l~--~~-~L~q~P 294 (294)
T d1uypa2 285 VE--NN-ELKVKP 294 (294)
T ss_dssp EE--TT-EEEEEE
T ss_pred EE--CC-EEEecC
Confidence 96 44 799998
|
| >d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Probab=100.00 E-value=9.9e-78 Score=617.75 Aligned_cols=309 Identities=31% Similarity=0.618 Sum_probs=251.9
Q ss_pred ccccceeeeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC-cC-CCcEEe
Q 011094 115 TWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW-YD-INGVWT 192 (494)
Q Consensus 115 ~w~Rp~~Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~-~D-~~Gv~S 192 (494)
+-+||+|||+|++||||||||++|++|+|||||||||.++.||+|+||||+|+|||||+++|+||.|+.. .| ..||||
T Consensus 5 ~p~Rp~~H~~p~~gwlNDPnGl~y~~G~yHlFyQ~nP~~~~~g~~~WgHa~S~DLv~W~~~p~al~p~~~~~d~~~~~~S 84 (353)
T d1y4wa2 5 QPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEKPVALLARGFGSDVTEMYFS 84 (353)
T ss_dssp CTTCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSSSSCEEEEEEECCBTTTSCCCBEEEE
T ss_pred CCCcCcEeecCCCCCcCCCccceEECCEEEEEEecCCCCCCCCCeEEEEEEeccccceeECCccccCCccCcCCCCcccc
Confidence 3459999999999999999999999999999999999999999999999999999999999999999863 33 467999
Q ss_pred eeEEEccCC----------eEEEEEeccCC------------CccceEEEEEEcCCCCCCcceEEEc-CCCceecCCCC-
Q 011094 193 GSATILPDG----------QIVMLYTGSTD------------KSVQVQNLAYPADPSDPLLLDWVKY-PGNPVLVPPRH- 248 (494)
Q Consensus 193 GSavv~~dG----------~~~~~YTG~~~------------~~~q~q~lA~S~D~~d~lL~~W~K~-~~nPVi~~p~g- 248 (494)
|||+++.+| .++++|||+.. ...|.|++|+|.|.+ ++|+|+ +.||||..++.
T Consensus 85 Gsav~~~~~~~~~~~~g~~~l~~~YT~~~~~~~~~~~~~~~~~~~~~q~~A~s~d~g----~~~~~~~~~npvi~~~~~~ 160 (353)
T d1y4wa2 85 GSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDG----LTWTTYDAANPVIPNPPSP 160 (353)
T ss_dssp EEEEECTTCTTSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTT----SSCEECTTTCCSBCSCCTT
T ss_pred CceEecCCCccccccCCCceEEEEEeeeecccccccCcccccCCcEEEEEEEECCCC----cceEEecCCCeEecCCCCC
Confidence 999876443 58899999742 235789999998864 788886 57999986543
Q ss_pred --CCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcCcccccCCCCCceEeccEEEecccCccccc
Q 011094 249 --IGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLD 326 (494)
Q Consensus 249 --~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~ 326 (494)
....+||||+|+|. .++.|+|++++. .+.|.+++|+|+||++|++.+++.......+||||||||+|...+
T Consensus 161 ~~~~~~~fRDP~V~~~-~~~~~~~~~~~~-~~~g~v~ly~S~Dl~~W~~~g~l~~~~~~g~~wECPdlf~l~~~~----- 233 (353)
T d1y4wa2 161 YEAEYQNFRDPFVFWH-DESQKWVVVTSI-AELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDS----- 233 (353)
T ss_dssp CGGGTTSEEEEEEEEE-TTTTEEEEEEEE-GGGTEEEEEEESSSSSCEEEEEECCCSCCSSEEEEEEEEEEEBTT-----
T ss_pred CcccccccCCCceEEE-CCCCEEEEEEee-cCCCeEEEEecCCCCceEEeccccccCCCCcceeeeEEEEeecCC-----
Confidence 23469999999775 444444444443 446889999999999999999986544445799999999997543
Q ss_pred cccCCCCeEEEEEeeeCCC-------ceeEEEEEEecCCCCcccCCCCCc--ccccceeeecC-CCcccceeecCCCCcE
Q 011094 327 TSATGPGIKHVLKASLDDT-------KVDHYAIGTYNPANDKWTPDNPEE--DVGIGLKWDYG-RYYASKSFYDPYKKRR 396 (494)
Q Consensus 327 ~s~~G~~~k~vl~~s~~~~-------~~~~Y~iG~~d~~~~~f~p~~~~~--d~g~~~rlD~G-~fYA~qtf~d~~~~Rr 396 (494)
|.+.+|||..+++.. .+..|++|+||.. +|+|+.... ..+...++|+| +|||+|||.|+.++||
T Consensus 234 ----~~~~~~vl~~g~~~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~~~~~~~~~~~lD~G~dfYA~qtf~d~~~gRr 307 (353)
T d1y4wa2 234 ----GNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGT--TFTPDADTVYPGNSTANWMDWGPDFYAAAGYNGLSLNDH 307 (353)
T ss_dssp ----SSCEEEEEEEEEESCCSTTCCSCEEEEEEEEECSS--CEEECTTTSCSSSSCCEESCSSSSCEEEEECBSCCGGGC
T ss_pred ----CCceEEEEEecccCCCCcccccccceEEEEEecCc--eeeecCCccccCCCccceeecCcCeeECCceeCCCCCCE
Confidence 235799999886532 3578999999965 787765433 23445789999 7999999999778999
Q ss_pred EEEEEccCCCCCCCCcCCCCccCCcccEEEEEeeC-CCceEEEcc
Q 011094 397 IVWGWINETDTESDDLEKGWASVQTIPRTVLYDNK-TGSNVVQWP 440 (494)
Q Consensus 397 il~GW~~~~d~~~~~~~~gWag~lslPR~l~l~~~-~g~~L~q~P 440 (494)
||||||++++...+..+.||+|+|||||||+|++. ++.+|+|+|
T Consensus 308 i~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~~~~~~L~Q~P 352 (353)
T d1y4wa2 308 VHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQP 352 (353)
T ss_dssp EEEEECSCTTTGGGCCCSSEECCBCCCEEEEEEEETTEEEEEEEE
T ss_pred EEEEecCCCccCCCCCCCCcceeeEeCEEEEEEECCCCCEEEEcC
Confidence 99999999988777788999999999999999852 234899998
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Probab=99.97 E-value=4.9e-30 Score=269.04 Aligned_cols=278 Identities=14% Similarity=0.173 Sum_probs=191.1
Q ss_pred ccCCccceE-ECCEEEEEEeeCCCCCCCC---CcEEEEEEecCccCeeecceeccCCC--------CcCCCcEEeeeEEE
Q 011094 130 MNDPNGPLF-YKGWYHLFYQYNPDSAVWG---NITWGHAVSADLIHWLYLPIAMVPDQ--------WYDINGVWTGSATI 197 (494)
Q Consensus 130 mNDPNG~~y-~~G~YHLFYQ~nP~~~~wg---~~~WGHA~S~DLvhW~~~p~AL~Pd~--------~~D~~Gv~SGSavv 197 (494)
+.|++|-.. ++|++++|++..|....+. ...+.|+.|+||.||++.+.++.+.. ..+..+-||||||+
T Consensus 57 l~d~~g~~~~~~G~~~~f~L~a~~~~~~d~~i~~~y~~~~s~dl~~W~~~G~vf~d~~~~~~~~~~~~~~~~eWSGSAv~ 136 (440)
T d1oyga_ 57 LQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKDQTQEWSGSATF 136 (440)
T ss_dssp EECTTSSBCCBTTEEEEEEEEECTTCTTCCEEEEEEEETTCCSGGGCEEEEESCCTTHHHHTTCTTGGGCCEEEEEEEEE
T ss_pred eECCCCCEEEECCEEEEEEEeCCCCCCCCCeEEEEEeecCCCccCCCEECccccCCCccccccccccCCCCccCccceEE
Confidence 778888554 7999999999886543322 23456666899999999998775442 23445779999998
Q ss_pred ccCCeEEEEEeccCCCccceEEEEEEcC--CCCCCcceEEEcCCCceecCCCCC-----------------CCCCCCCCe
Q 011094 198 LPDGQIVMLYTGSTDKSVQVQNLAYPAD--PSDPLLLDWVKYPGNPVLVPPRHI-----------------GPKDFRDPT 258 (494)
Q Consensus 198 ~~dG~~~~~YTG~~~~~~q~q~lA~S~D--~~d~lL~~W~K~~~nPVi~~p~g~-----------------~~~~fRDP~ 258 (494)
..||+++|||||.+......|.++.+.. ..|.++..|++.+.+++|..|+|. ...+||||+
T Consensus 137 ~~DG~~~LfYTg~~~~~~~~q~i~~a~~~~~~d~~~~~~~~~~~~~~l~~pDG~~Yqt~~q~~~~~~~~~~d~~~fRDP~ 216 (440)
T d1oyga_ 137 TSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPH 216 (440)
T ss_dssp CTTSCEEEEEEEEEGGGTTEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCCEEEE
T ss_pred ccCCeEEEEEEeccCCCCCcceEEEEEEEEeecCCcceeecccCCceeecCCCccceeeecccccCCCCCCCcccccCCc
Confidence 8899999999997643222232221110 012234788887666666555432 245899999
Q ss_pred eEeecCCCeEEEEEeeecC-------------------------------------------CeeEEEEEEeCCCCCCEE
Q 011094 259 TAWAGPDGKWRLTIGSKIG-------------------------------------------KTGISLVYQTTDFKTYEL 295 (494)
Q Consensus 259 V~w~~~dg~w~MviGa~~~-------------------------------------------~~G~v~lY~S~Dl~~W~~ 295 (494)
| |. .+|+|||++++... +.++.+++.|+|+.+|++
T Consensus 217 v-~~-~~g~~y~~fegn~~~~~G~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~ng~I~l~~~s~D~~~We~ 294 (440)
T d1oyga_ 217 Y-VE-DKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKV 294 (440)
T ss_dssp E-EE-ETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTTSSEEEE
T ss_pred e-ee-eCCeEEEEEeccccccccccccchhccccccccccccccccccccccccccccceeccceEEEEEeCCCccccee
Confidence 9 54 47999999987521 123445667999999999
Q ss_pred cCcccccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeee-------CCCceeEEEEEEe--cCCCCcccCCC
Q 011094 296 LDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASL-------DDTKVDHYAIGTY--NPANDKWTPDN 366 (494)
Q Consensus 296 ~~~ll~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~-------~~~~~~~Y~iG~~--d~~~~~f~p~~ 366 (494)
.++++++....+|||||++|++++ ||+|..|. ++.+.+.|.++-| |...+.|+|.+
T Consensus 295 ~~pLl~a~~v~d~~ErP~I~~~nG---------------KYYLFtss~~~~~a~~~~~~~~~~~~g~Vsdsl~Gpy~PlN 359 (440)
T d1oyga_ 295 MKPLIASNTVTDEIERANVFKMNG---------------KWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYKPLN 359 (440)
T ss_dssp EEEEEECTTTCSCCEEEEEEEETT---------------EEEEEEEEEGGGCCCTTCCTTCEEEEEEEESSTTCCCEEGG
T ss_pred cCcceeccCCCCeEECCEEEEECC---------------EEEEEEecccccccCCCcCCCCceEEEEECCCCCCCCeecC
Confidence 999998776678999999999952 67776553 3333333333333 56677899887
Q ss_pred CC-cccccceeeecCC-CcccceeecCCCCcEEEEEEccCCCCCCCCcCCCCccCCcccEEEEEe
Q 011094 367 PE-EDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYD 429 (494)
Q Consensus 367 ~~-~d~g~~~rlD~G~-fYA~qtf~d~~~~Rril~GW~~~~d~~~~~~~~gWag~lslPR~l~l~ 429 (494)
.. +.++...+.|++. .||..+|.+...+++++++||.+.+ ...+.. |.++-+.+|.|+
T Consensus 360 ~sGlvl~~~~~~~~~~~~Ys~~~~p~g~~~~~lv~s~~~~~~-~~~~~g----~t~APt~~l~l~ 419 (440)
T d1oyga_ 360 KTGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRG-FYADKQ----STFAPSFLLNIK 419 (440)
T ss_dssp GTSEEEEECCCTTCTTCEEEEEEECCSSSSEEEEEEEESCTT-SCSSCC----CEECBCEEEEEE
T ss_pred CCcceeccCCCCCcCcccceeEEecCCCCceEEEEEeecCcC-cccccC----CccCCcEEEEEc
Confidence 43 5566666788896 4999999987778899999999987 333333 444455556664
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Probab=99.69 E-value=6.6e-17 Score=162.69 Aligned_cols=147 Identities=12% Similarity=0.064 Sum_probs=112.8
Q ss_pred cceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecc-eeccCCC---CcCCCcEEeeeEEEccCCeEEEEEecc
Q 011094 135 GPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP-IAMVPDQ---WYDINGVWTGSATILPDGQIVMLYTGS 210 (494)
Q Consensus 135 G~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p-~AL~Pd~---~~D~~Gv~SGSavv~~dG~~~~~YTG~ 210 (494)
|+++++|+|||+|+..- .++.+++|+|+|+|+|||+..+ +++.|+. .++..||++++++. .+|+++|+||+.
T Consensus 49 ~~i~~~g~~~ll~r~~~---~~~~~~ig~A~S~DGi~w~~~~~pv~~p~~~~~~~~~~gv~DPrv~~-~~d~yym~yt~~ 124 (327)
T d1vkda_ 49 AVVPYNGEFVGVFRIDH---KNTRPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYAYDPRVVK-IEDTYYITFCTD 124 (327)
T ss_dssp EEEEETTEEEEEEEEEE---TTSCEEEEEEEESSSSSCEECSSCCCEECTTSCBCCCSSEEEEEEEE-ETTEEEEEEEEE
T ss_pred EEEEECCEEEEEEEecC---CCCceEEEEEEcCCccCCEeCCCCeecCCCCCcccccCcEEcceEEE-ECCEEEEEEEec
Confidence 68999999999998642 3467899999999999999776 5667764 35678999999975 689999999987
Q ss_pred CCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeee---cCCeeEEEEEEe
Q 011094 211 TDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK---IGKTGISLVYQT 287 (494)
Q Consensus 211 ~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~---~~~~G~v~lY~S 287 (494)
.. ..++++|+|.|. ++|+|.+ +++. ...||+.++..+.+|+|+|+.-.. ....|.+.+.+|
T Consensus 125 ~~--~~~i~lA~S~D~-----~~w~k~g--~~~~-------~~~kd~~lfpeki~Gky~ml~Rp~~~~~~~~~~I~la~S 188 (327)
T d1vkda_ 125 DH--GPTIGVGMTKDF-----KTFVRLP--NAYV-------PFNRNGVLFPRKINGKYVMLNRPSDNGHTPFGDIFLSES 188 (327)
T ss_dssp SS--SEEEEEEEESSS-----SSEEEEC--CSSS-------SSEEEEEECSSCBTTBEEEEEEECCSSSCSCCCEEEEEE
T ss_pred CC--CcEEEEEEecCc-----chheecC--CccC-------ccccCceEeeeeccCeEEEEEeeccCCCcccceEEEEcC
Confidence 54 367899999995 8999983 3322 134788774444589999996432 123456889999
Q ss_pred CCCCCCEEcCcccc
Q 011094 288 TDFKTYELLDEYLH 301 (494)
Q Consensus 288 ~Dl~~W~~~~~ll~ 301 (494)
+|+.+|+....++.
T Consensus 189 ~Dl~~W~~~~~v~~ 202 (327)
T d1vkda_ 189 PDMIHWGNHRFVLG 202 (327)
T ss_dssp SSSSCBEEEEEEEC
T ss_pred CCcccccccceecc
Confidence 99999998766653
|
| >d1uv4a1 b.67.2.1 (A:3-293) Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Endo-1,5-arabinanase species: Bacillus subtilis [TaxId: 1423]
Probab=99.63 E-value=1.8e-14 Score=140.80 Aligned_cols=180 Identities=16% Similarity=0.116 Sum_probs=120.1
Q ss_pred ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCc-------CCCcEEeeeEEEccCCe
Q 011094 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWY-------DINGVWTGSATILPDGQ 202 (494)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~-------D~~Gv~SGSavv~~dG~ 202 (494)
++||+ ++.++|+||||...... ...+.+++|+||+||+.++.++.+.... ...++|.++++. .||+
T Consensus 10 ihDP~-vi~~~g~YY~~~t~~~~-----~~g~~i~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g~ 82 (291)
T d1uv4a1 10 LHDPT-MIKEGSSWYALGTGLTE-----ERGLRVLKSSDAKNWTVQKSIFTTPLSWWSNYVPNYGQNQWAPDIQY-YNGK 82 (291)
T ss_dssp CSSCE-EEEETTEEEEEEECCTT-----SSBEEEEEESSSSSCEEEEEETSSCCGGGGGTSTTCCSBCEEEEEEE-ETTE
T ss_pred ccCCE-EEEECCEEEEEEecCCC-----CCcEEEEECCCCCCCEECcccccCCcccccccCCccCCcccceEEEE-ECCE
Confidence 46998 99999999999864321 2357889999999999999887654321 135799999865 7999
Q ss_pred EEEEEeccCCC-ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeE
Q 011094 203 IVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGI 281 (494)
Q Consensus 203 ~~~~YTG~~~~-~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~ 281 (494)
++|||++.... ..+.+++|+|++.. ...|+.. ++++...+. .....+||.+++ ++||++||+.+... .|+
T Consensus 83 yylyy~~~~~~~~~~~i~~a~s~~~~---~Gpw~~~--~~~~~~~~~-~~~~~iDp~vf~-D~dG~~Y~~~~~~~--~~i 153 (291)
T d1uv4a1 83 YWLYYSVSSFGSNTSAIGLASSTSIS---SGGWKDE--GLVIRSTSS-NNYNAIDPELTF-DKDGNPWLAFGSFW--SGI 153 (291)
T ss_dssp EEEEEEECCTTCSCEEEEEEEESCTT---TTCCEEE--EEEEEECTT-SSSCCCSCEEEE-CTTSCEEEEECBST--TCE
T ss_pred EEEEEEecCCCCCcceEEEEEeCCCC---CCCCCcC--ccccccccC-CCCCccCceEEE-ecCCcEEEEecccC--Cce
Confidence 99999987543 35677899997731 1458764 333332222 224568999965 57899999998542 243
Q ss_pred EEEEE-eCCCCCCEEcCccc---ccCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeC
Q 011094 282 SLVYQ-TTDFKTYELLDEYL---HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (494)
Q Consensus 282 v~lY~-S~Dl~~W~~~~~ll---~~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~ 343 (494)
.+++ +.|... ..+... .......+.|||.+|+.+ .+++|..|..
T Consensus 154 -~i~~l~~~~~~--~~g~~~~i~~~~~~~~~~EgP~i~k~~---------------g~Yyl~~S~~ 201 (291)
T d1uv4a1 154 -KLTKLDKSTMK--PTGSLYSIAARPNNGGALEAPTLTYQN---------------GYYYLMVSFD 201 (291)
T ss_dssp -EEEEECTTTCS--EEEEEEEEECCTTTTTCEEEEEEEEET---------------TEEEEEEEEE
T ss_pred -EEEeecccccc--CcCceeEEEecCCCCccccccEEEEEC---------------CEEEEEEecC
Confidence 3343 344333 333221 122233589999999985 2677777754
|
| >d1gyha_ b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: alpha-L-arabinanase species: Cellvibrio cellulosa [TaxId: 155077]
Probab=99.48 E-value=8.4e-13 Score=128.48 Aligned_cols=182 Identities=16% Similarity=0.166 Sum_probs=117.6
Q ss_pred ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC-------cCCCcEEeeeEEEccCCe
Q 011094 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW-------YDINGVWTGSATILPDGQ 202 (494)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~-------~D~~Gv~SGSavv~~dG~ 202 (494)
+.||+ ++.++|+||||... + .+..++|+||+||+.++.++.+... ....++|.++++. .+|+
T Consensus 7 ~~DP~-v~~~~g~yYl~~t~-~--------gi~~~~S~DLvnW~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g~ 75 (318)
T d1gyha_ 7 VHDPV-MTREGDTWYLFSTG-P--------GITIYSSKDRVNWRYSDRAFATEPTWAKRVSPSFDGHLWAPDIYQ-HKGL 75 (318)
T ss_dssp CSSCE-EEEETTEEEEEESE-E--------TCEEEEESSSSEEEEEEESSSSCCTTHHHHCTTCCSEEEEEEEEE-ETTE
T ss_pred CCCCE-EEEECCEEEEEEee-C--------CEEEEECCCCCCCeECCccccCCccccccCCCcCCCceECCEEEE-EcCc
Confidence 46998 88899999998642 1 2457799999999999988865431 1245799999865 7899
Q ss_pred EEEEEeccCCC-ccceEEEEEEcCCC-CCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCee
Q 011094 203 IVMLYTGSTDK-SVQVQNLAYPADPS-DPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTG 280 (494)
Q Consensus 203 ~~~~YTG~~~~-~~q~q~lA~S~D~~-d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G 280 (494)
++|||++...+ ....+.+|++.... +.....|++. ..+....+......++||.++ .+++|++||+.++... +
T Consensus 76 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~iDp~v~-~d~dG~~Yl~~~~~~~--~ 150 (318)
T d1gyha_ 76 FYLYYSVSAFGKNTSAIGVTVNKTLNPASPDYRWEDK--GIVIESVPQRDLWNAIAPAII-ADDHGQVWMSFGSFWG--G 150 (318)
T ss_dssp EEEEEEECCTTSCCEEEEEEEESCSCTTSTTCCCEEE--EEEEEECTTTCSSCCCCCEEE-ECTTSCEEEEECBSTT--C
T ss_pred eEEEEEEecCCCcccceeEEEEeccCCCccccccccC--ceecccCCCCCCCceEccceE-eecCCcEEEeccCCCC--C
Confidence 99999997643 34556777765421 2223678775 234433344445678999995 4689999999886432 2
Q ss_pred EEEEEE-eCCCC------CCEEcCcc----ccc--CCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeC
Q 011094 281 ISLVYQ-TTDFK------TYELLDEY----LHA--VPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (494)
Q Consensus 281 ~v~lY~-S~Dl~------~W~~~~~l----l~~--~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~ 343 (494)
+ .+.+ +.|+. .|...... +.. .....++|||.+|+.++ +++|..|..
T Consensus 151 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~g---------------~yyl~yS~~ 210 (318)
T d1gyha_ 151 L-KLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEAPFILRKGD---------------YYYLFASWG 210 (318)
T ss_dssp E-EEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTTSCCSCCEEEEEEEEETT---------------EEEEEEEES
T ss_pred e-eeEecCccceeeccccccccccccccceeeccCCCCCceeecCEEEEECC---------------EEEEEEecC
Confidence 2 1222 23332 22222211 111 11234899999999852 677777754
|
| >d1wl7a1 b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermodenitrificans [TaxId: 33940]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Arabinanase-TS species: Bacillus thermodenitrificans [TaxId: 33940]
Probab=99.43 E-value=3.4e-12 Score=124.83 Aligned_cols=181 Identities=21% Similarity=0.209 Sum_probs=116.6
Q ss_pred cccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCC--------CCcCCCcEEeeeEEEccC
Q 011094 129 WMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPD--------QWYDINGVWTGSATILPD 200 (494)
Q Consensus 129 wmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd--------~~~D~~Gv~SGSavv~~d 200 (494)
|..||+ +++++|+|+||... .++..++|+||+||+..+.+|... .+.+..++|.+.++. .+
T Consensus 23 ~~~DP~-i~~~~g~yY~~~t~---------~gi~i~~S~DL~nW~~~g~~l~~~~~~~~~~~~~~~~~~~WAP~v~~-~~ 91 (312)
T d1wl7a1 23 WAHDPV-IAKEGSRWYVFHTG---------SGIQIKTSEDGVHWENMGRVFPSLPDWCKQYVPEKDEDHLWAPDICF-YN 91 (312)
T ss_dssp BCSSCE-EEEETTEEEEEESE---------ETCEEEEESSSSEEEEEEESCSSCCTTHHHHCTTCCSCEEEEEEEEE-ET
T ss_pred CcCCCE-EEEECCEEEEEEec---------CCceEEEcCCCCCceECcccccCCcccccccCCcccCCceEcceEEE-eC
Confidence 567998 88999999998532 135789999999999999887543 234678999999975 78
Q ss_pred CeEEEEEeccCCC-ccceEEEEEEcC--CCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeecC
Q 011094 201 GQIVMLYTGSTDK-SVQVQNLAYPAD--PSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG 277 (494)
Q Consensus 201 G~~~~~YTG~~~~-~~q~q~lA~S~D--~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~ 277 (494)
|+++||||+.... ....+.+|.+.- ..++ ...|++. .|++...+. ....++||.+++ +++|++||+.+....
T Consensus 92 g~yyl~~t~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~--~~~~~~~~~-~~~~~iD~~~f~-d~dG~~y~~~~~~~~ 166 (312)
T d1wl7a1 92 GIYYLYYSVSTFGKNTSVIGLATNRTLDPRDP-DYEWKDM--GPVIHSTAS-DNYNAIDPNVVF-DQEGQPWLSFGSFWS 166 (312)
T ss_dssp TEEEEEEEECCTTCCCEEEEEEEESCSCTTST-TCCCEEE--EEEEEECTT-SSSCCCSCEEEE-CTTSCEEEEECBSTT
T ss_pred CEEEEEEEeecCCcccceeeEEEEecccCCCC-ccccccc--cceecCCCC-CCCCcCCCceeE-ccCCcEEEeecCCCC
Confidence 9999999987643 334556665432 2222 3566654 455443222 335789999954 579999999875422
Q ss_pred CeeEEEEEE-eCCCCCCEEcCc-cccc--CCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeC
Q 011094 278 KTGISLVYQ-TTDFKTYELLDE-YLHA--VPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (494)
Q Consensus 278 ~~G~v~lY~-S~Dl~~W~~~~~-ll~~--~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~ 343 (494)
+ +.+++ +.|......... +... .......|+|.+|+.+ .+++|..|..
T Consensus 167 --~-i~~~~l~~d~~~~~~~~~~i~~~~~~~~~~~~EgP~v~k~~---------------g~yYl~ys~~ 218 (312)
T d1wl7a1 167 --G-IQLIQLDTETMKPAAQAELLTIASRGEEPNAIEAPFIVCRN---------------GYYYLFVSFD 218 (312)
T ss_dssp --C-EEEEEBCTTTCSBCTTCCCEEEECCSSSSCCEEEEEEEEET---------------TEEEEEEEES
T ss_pred --c-eeEEEEcCcCCcCcCCceEEEecccCCCCCcccccEEEEEC---------------CcEEEEEecC
Confidence 2 33343 334332111111 1111 1123468999999985 2777877754
|
| >d1y7ba2 b.67.2.1 (A:4-324) Beta-D-xylosidase N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.25 E-value=8.2e-10 Score=107.85 Aligned_cols=169 Identities=15% Similarity=0.065 Sum_probs=108.8
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC------CcCCCcEEeeeEEEccCC
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ------WYDINGVWTGSATILPDG 201 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~------~~D~~Gv~SGSavv~~dG 201 (494)
|+..||. ++.++|+|+||+...... ..+.-++|+||+||+.++.+|.... ..+..++|...++. .+|
T Consensus 8 ~~~aDP~-v~~~~~~yY~~~tt~~~~-----~gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g 80 (321)
T d1y7ba2 8 GFNPDPS-ICRADTDYYIATSTFEWF-----PGVQIHHSKDLVNWHLVAHPLNRTSLLDMKGNPNSGGIWAPDLSY-HDG 80 (321)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTEE-----SBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ETT
T ss_pred CCCCCCE-EEEECCEEEEEEecCCCC-----CCeEEEECCCccCCEEccccccCCcccccCCCcccCcccCceEEE-ECC
Confidence 4568998 889999999998643211 1245578999999999987764332 23456799999865 799
Q ss_pred eEEEEEeccCCC----ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-
Q 011094 202 QIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI- 276 (494)
Q Consensus 202 ~~~~~YTG~~~~----~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~- 276 (494)
+++|+|+..... ..+.+.+|.+++.. ..|+.. ... .....||.+++ +.+|+.+|+.+...
T Consensus 81 ~yylyys~~~~~~~~~~~~~~~~a~a~~p~----Gp~~~~----~~~------~~~~~D~~~~~-d~dg~~~~~~~~~~~ 145 (321)
T d1y7ba2 81 KFWLIYTDVKVTDGMWKDCHNYLTTCESVD----GVWSDP----ITL------NGSGFDASLFH-DNDGKKYLVNMYWDQ 145 (321)
T ss_dssp EEEEEEEEESCCSSSCCCEEEEEEEESSTT----SCCCCC----EEC------CCSCSCCEEEE-CTTSCEEEEEEEECC
T ss_pred EEEEEEEeeccCCCCccceeeEeeecCCCC----CCcccc----eee------cccccCCcEEE-EcCCCEEEEEeccCC
Confidence 999999986532 23567788887753 344321 111 12457999954 68899999887542
Q ss_pred ----CC-eeEEEEEEeCCCCCCEEcCcccccCCCCCceEeccEEEec
Q 011094 277 ----GK-TGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318 (494)
Q Consensus 277 ----~~-~G~v~lY~S~Dl~~W~~~~~ll~~~~~~gmwECPdlf~l~ 318 (494)
.. .++.+...+.|..+..-....+.........|.|.+|+-+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~ 192 (321)
T d1y7ba2 146 RTYNHNFYGIVLQEYSDKEKKLIGKAKIIYKGTDIKYTEGPHIYHIG 192 (321)
T ss_dssp CTTSCSEEEEEEEEEETTTTEEEEEEEEEECCCTTCCCEEEEEEEET
T ss_pred CccccCccceeeEeeCCCcceEcCCceEEeeccCCCccccceEEEEC
Confidence 12 2334444456666554333332222223357999999864
|
| >d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Bacillus halodurans [TaxId: 86665]
Probab=99.19 E-value=4.7e-10 Score=109.87 Aligned_cols=179 Identities=15% Similarity=0.121 Sum_probs=110.4
Q ss_pred CCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC------CcCCCcEEeeeEEEccC
Q 011094 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ------WYDINGVWTGSATILPD 200 (494)
Q Consensus 127 ~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~------~~D~~Gv~SGSavv~~d 200 (494)
.|+..||. +++++|+|+||+..+.. ...+..++|+||+||+.++.+|.... ......+|.+.+.. .|
T Consensus 8 ~~~~aDP~-vi~~~~~yY~~~tt~~~-----~~gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~ 80 (317)
T d1yrza2 8 PGFHPDPS-IVRVGDDYYIATSTFEW-----FPGVRIHHSRDLKHWRFVSSPLTRTSQLDMKGNMNSGGIWAPCLSY-HD 80 (317)
T ss_dssp CSSCCSCE-EEEETTEEEEEECCBTE-----ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ET
T ss_pred CCCCCCCE-EEEECCEEEEEEccCCC-----CCCeEEEECCCCCCCeECCccccCccccccCCCcccceeecceEEE-EC
Confidence 45678998 88999999999863211 11245579999999999998775433 23345689998864 79
Q ss_pred CeEEEEEeccCCC----ccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec
Q 011094 201 GQIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI 276 (494)
Q Consensus 201 G~~~~~YTG~~~~----~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~ 276 (494)
|+++|+|+..... ....+.+|.+++.. ..|+ .|+.. .....||.++ .+++|+.||+.+...
T Consensus 81 G~~ylyy~~~~~~~~~~~~~~~~~~~a~~p~----gp~~----~~~~~------~~~~iDp~~f-~D~dG~~Yl~~~~~~ 145 (317)
T d1yrza2 81 GTFYLIYTDVKQWHGAFKDAHNYLVTAQNIE----GPWS----DPIYL------NSSGFDPSLF-HDDDGRKWLVNMIWD 145 (317)
T ss_dssp TEEEEEEEEEEECSSSCCEEEEEEEEESSSS----SCCC----CCEEC------CCSCSCCEEE-ECTTSCEEEEEEEEC
T ss_pred CEEEEEEEEeccCCCCcccceEEEEecCCCC----CCcc----ceeee------cCCccCCcEE-EecCCCEEEEEeccC
Confidence 9999999875421 23345566666542 3443 23322 1245799995 468999999887542
Q ss_pred C---C--eeEEEEEE-eCCCCCCEEcCcccc--cCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCC
Q 011094 277 G---K--TGISLVYQ-TTDFKTYELLDEYLH--AVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (494)
Q Consensus 277 ~---~--~G~v~lY~-S~Dl~~W~~~~~ll~--~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~ 344 (494)
. . ...+.+.. +.+ .++..+.... ........|+|.+|+.+ .+++|..|...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Egp~i~k~~---------------g~yyl~~s~~~ 204 (317)
T d1yrza2 146 YRKGNHPFAGIILQEYSEA--EQKLVGPVKNIYKGTDIQLTEGPHLYKKD---------------GYYYLLVAEGG 204 (317)
T ss_dssp CCTTSCSEEEEEEEEEETT--TTEEEEEEEEEECCCTTCCCEEEEEEEET---------------TEEEEEEEESC
T ss_pred cCCCCccccceeeeecCcc--cCeEcCCceEEEeccCCCcccCceEEEEC---------------CEEEEEEccCC
Confidence 1 1 11122222 333 3444433321 12223468999999875 26777666544
|
| >d2exha2 b.67.2.1 (A:3-324) Beta-D-xylosidase N-terminal domain {Geobacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Geobacillus stearothermophilus [TaxId: 1422]
Probab=99.18 E-value=8e-09 Score=101.34 Aligned_cols=181 Identities=16% Similarity=0.083 Sum_probs=112.2
Q ss_pred CCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC------CcCCCcEEeeeEEEccC
Q 011094 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ------WYDINGVWTGSATILPD 200 (494)
Q Consensus 127 ~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~------~~D~~Gv~SGSavv~~d 200 (494)
.|+..||. ++.++|+||||+.... +...+..++|+||+||+..+.+|.... ..+..++|.+.+. ..|
T Consensus 8 ~~~~aDP~-v~~~~~~yY~~~tt~~-----~~~g~~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAPev~-~~~ 80 (322)
T d2exha2 8 TGFHPDPS-ICRVGDDYYIAVSTFE-----WFPGVRIYHSKDLKNWRLVARPLNRLSQLNMIGNPDSGGVWAPHLS-YSD 80 (322)
T ss_dssp CSSCCSCE-EEEETTEEEEEECCBT-----EESBCEEEEESSSSSCEEEECCBCSTTTCCCTTCCTTCBBCSCEEE-EET
T ss_pred CCCCCCCE-EEEECCEEEEEEcCCC-----CCCCcEEEECCCcCCcEEcccccccccccccCCCcccCCcccceEE-EEC
Confidence 36778998 8899999999985321 112345679999999999987764322 2345679999986 479
Q ss_pred CeEEEEEeccCCC-c---cceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec
Q 011094 201 GQIVMLYTGSTDK-S---VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI 276 (494)
Q Consensus 201 G~~~~~YTG~~~~-~---~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~ 276 (494)
|+++|+|+..... . .....+|.+++.. ..|++ |+... ....||.+++ +++|+.||+.+...
T Consensus 81 G~yylyys~~~~~~~~~~~~~~~~~~sd~~~----gp~~~----~~~~~------~~~~dp~~f~-d~dG~~Yl~~~~~~ 145 (322)
T d2exha2 81 GKFWLIYTDVKVVEGQWKDGHNYLVTCDTID----GAWSD----PIYLN------SSGFDPSLFH-DEDGRKYLVNMYWD 145 (322)
T ss_dssp TEEEEEEEEECCCSSSCCCEEEEEEEESSTT----SCCCC----CEECC------CSCSCCEEEE-CTTSCEEEEEEEEC
T ss_pred CEEEEEEEeecccCCCccccceEEEecCCCC----CCccc----ceEec------CCCCCCCeEE-EcCCCEEEEecccC
Confidence 9999999976432 1 2334566665532 23432 33221 2457999954 57999999987653
Q ss_pred C---CeeEEEE-EEeCCCCCCEEcCcccc--cCCCCCceEeccEEEecccCccccccccCCCCeEEEEEeeeCC
Q 011094 277 G---KTGISLV-YQTTDFKTYELLDEYLH--AVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (494)
Q Consensus 277 ~---~~G~v~l-Y~S~Dl~~W~~~~~ll~--~~~~~gmwECPdlf~l~~~~~~~l~~s~~G~~~k~vl~~s~~~ 344 (494)
+ ..+...+ ....+...++..+.... ........|.|.+|+.++ +++|..|...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~g---------------~YYl~~s~~~ 204 (322)
T d2exha2 146 HRVDHHPFYGIVLQEYSVEQKKLVGEPKIIFKGTDLRITEGPHLYKING---------------YYYLLTAEGG 204 (322)
T ss_dssp CCTTSCSEEEEEEEEEETTTTEEEEEEEEEECCCTTCCCEEEEEEEETT---------------EEEEEEEESC
T ss_pred CccCcCCccceEEeeecCcCCeECCCcEEEEEecCCCcccCcEEEEECC---------------EEEEEEeCCC
Confidence 2 1111111 22334555666554321 112234689999999752 6777676543
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Probab=99.09 E-value=2.2e-10 Score=114.36 Aligned_cols=125 Identities=15% Similarity=0.176 Sum_probs=95.0
Q ss_pred ecCccCeeecc-eeccCCCCcCCCcEEeeeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceec
Q 011094 166 SADLIHWLYLP-IAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLV 244 (494)
Q Consensus 166 S~DLvhW~~~p-~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~ 244 (494)
|++++ |++.. +.|.|+..+...+||.++|+. .+|+++|+|.+...++...+++|+|.|+ +||+|.+ .||+.
T Consensus 21 ~~~~~-~R~~~NPil~~~~~~~~~~vfNp~~i~-~~g~~~ll~r~~~~~~~~~ig~A~S~DG-----i~w~~~~-~pv~~ 92 (327)
T d1vkda_ 21 YTGPV-WRYSKNPIIGRNPVPKGARVFNSAVVP-YNGEFVGVFRIDHKNTRPFLHFGRSKDG-----INWEIEP-EEIQW 92 (327)
T ss_dssp CCSSE-EECTTCCSBCBSCSTTEEEEEEEEEEE-ETTEEEEEEEEEETTSCEEEEEEEESSS-----SSCEECS-SCCCE
T ss_pred CCCCc-eecCCCccccCCCCcchhceeccEEEE-ECCEEEEEEEecCCCCceEEEEEEcCCc-----cCCEeCC-CCeec
Confidence 44443 55444 667887766678899998875 7999999998877767788999999996 8999975 57765
Q ss_pred CCCC---CCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcCcccc
Q 011094 245 PPRH---IGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLH 301 (494)
Q Consensus 245 ~p~g---~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll~ 301 (494)
+... ......+||.|+. .+|+|||++.+.. +..++.+++|+|+++|+..+.+..
T Consensus 93 p~~~~~~~~~~gv~DPrv~~--~~d~yym~yt~~~-~~~~i~lA~S~D~~~w~k~g~~~~ 149 (327)
T d1vkda_ 93 VDVNGEPFQPSYAYDPRVVK--IEDTYYITFCTDD-HGPTIGVGMTKDFKTFVRLPNAYV 149 (327)
T ss_dssp ECTTSCBCCCSSEEEEEEEE--ETTEEEEEEEEES-SSEEEEEEEESSSSSEEEECCSSS
T ss_pred CCCCCcccccCcEEcceEEE--ECCEEEEEEEecC-CCcEEEEEEecCcchheecCCccC
Confidence 4321 3345678999964 4689999988753 334678999999999999887653
|
| >d1uv4a1 b.67.2.1 (A:3-293) Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Endo-1,5-arabinanase species: Bacillus subtilis [TaxId: 1423]
Probab=98.32 E-value=4e-06 Score=80.50 Aligned_cols=144 Identities=13% Similarity=0.118 Sum_probs=86.8
Q ss_pred ceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccC--eeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEeccCCC
Q 011094 136 PLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIH--WLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK 213 (494)
Q Consensus 136 ~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvh--W~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~ 213 (494)
+.+++|+|||||..+..+ .+....++|+|+|... |+..+..+.+....+ ......++++++||+.+|+|......
T Consensus 76 v~~~~g~yylyy~~~~~~--~~~~~i~~a~s~~~~~Gpw~~~~~~~~~~~~~~-~~~iDp~vf~D~dG~~Y~~~~~~~~~ 152 (291)
T d1uv4a1 76 IQYYNGKYWLYYSVSSFG--SNTSAIGLASSTSISSGGWKDEGLVIRSTSSNN-YNAIDPELTFDKDGNPWLAFGSFWSG 152 (291)
T ss_dssp EEEETTEEEEEEEECCTT--CSCEEEEEEEESCTTTTCCEEEEEEEEECTTSS-SCCCSCEEEECTTSCEEEEECBSTTC
T ss_pred EEEECCEEEEEEEecCCC--CCcceEEEEEeCCCCCCCCCcCccccccccCCC-CCccCceEEEecCCcEEEEecccCCc
Confidence 788899999999876433 2356789999999866 998775544433222 23457888888899999999654321
Q ss_pred ccceEEEEEE-cCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec--C--Cee-EEEEEEe
Q 011094 214 SVQVQNLAYP-ADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI--G--KTG-ISLVYQT 287 (494)
Q Consensus 214 ~~q~q~lA~S-~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~--~--~~G-~v~lY~S 287 (494)
+.++.. .|. ...... ...+...+.. ..-.--|.+ ++ .+|+|+|++.+.. + ..+ .+.+++|
T Consensus 153 ----i~i~~l~~~~-----~~~~g~-~~~i~~~~~~--~~~~EgP~i-~k-~~g~Yyl~~S~~~~~~~~~~~y~v~~~~s 218 (291)
T d1uv4a1 153 ----IKLTKLDKST-----MKPTGS-LYSIAARPNN--GGALEAPTL-TY-QNGYYYLMVSFDKCCDGVNSTYKIAYGRS 218 (291)
T ss_dssp ----EEEEEECTTT-----CSEEEE-EEEEECCTTT--TTCEEEEEE-EE-ETTEEEEEEEEECSSSSSCCEEEEEEEEE
T ss_pred ----eEEEeecccc-----ccCcCc-eeEEEecCCC--CccccccEE-EE-ECCEEEEEEecCcccCCCCCCceeEEEEc
Confidence 333332 221 112211 0122222211 112235888 44 6899999987642 1 122 5667899
Q ss_pred CCCCC-CEEc
Q 011094 288 TDFKT-YELL 296 (494)
Q Consensus 288 ~Dl~~-W~~~ 296 (494)
+++.. |+..
T Consensus 219 ~~~~GP~~~~ 228 (291)
T d1uv4a1 219 KSITGPYLDK 228 (291)
T ss_dssp SSTTCCCBCT
T ss_pred CCCCCCCccC
Confidence 98765 6543
|
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=97.96 E-value=7.5e-05 Score=72.26 Aligned_cols=151 Identities=13% Similarity=0.166 Sum_probs=98.8
Q ss_pred cCCccccccccceeeeecCCCcccCCccc-----eEECCEEEEEEeeC--CCCCCCCCcEEEEEEecCccCeeecc--ee
Q 011094 108 NWTNAMFTWQRTSFHFQPEKNWMNDPNGP-----LFYKGWYHLFYQYN--PDSAVWGNITWGHAVSADLIHWLYLP--IA 178 (494)
Q Consensus 108 ~~~~~~~~w~Rp~~Hf~P~~gwmNDPNG~-----~y~~G~YHLFYQ~n--P~~~~wg~~~WGHA~S~DLvhW~~~p--~A 178 (494)
.-|..+..|.+-.-=+.|.. |..|+ +..+|++++||..+ +.........-.+|+|+|+++|+..+ ++
T Consensus 49 a~S~Dlv~W~~~~~al~p~~----d~~g~~sGsav~~~g~~~~~yT~~~~~~~~~~~~~~~~~a~s~dg~~w~k~~~npv 124 (294)
T d1uypa2 49 AVSDDLVHWRHLPVALYPDD----ETHGVFSGSAVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPV 124 (294)
T ss_dssp EEESSSSSCEEEEEEECCSS----TTEEEEEEEEEEETTEEEEEEEEEECCCSSCCCEEEEEEEEESSSSCCEECTTCCS
T ss_pred EEeCCcCCeEECCccccccc----CCCCeEEEEEEecCCeEEEEEEEeeCCCCCCcceeeeEEEECCCCCceEeecCCce
Confidence 44566778866554455543 44443 45799999999754 22221223567889999999999764 44
Q ss_pred ccCCCCcCCCcEEeeeEEEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCe
Q 011094 179 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPT 258 (494)
Q Consensus 179 L~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~ 258 (494)
|.+.......+.-...|. .++|+++|++.+...+..-...+..|+|+ ++|+.. .++.....+ ..+-.|.
T Consensus 125 i~~~~~~~~~~fRDP~V~-~~~g~w~M~~g~~~~~~~G~i~ly~S~Dl-----~~W~~~--g~l~~~~~~---~~~ECPd 193 (294)
T d1uypa2 125 ISKPPEEGTHAFRDPKVN-RSNGEWRMVLGSGKDEKIGRVLLYTSDDL-----FHWKYE--GAIFEDETT---KEIECPD 193 (294)
T ss_dssp BCSCSSTTEEEEEEEEEE-EETTEEEEEEEEEETTTEEEEEEEEESSS-----SSEEEE--EEEEEETTC---SCEEEEE
T ss_pred ecCCCccCccccCCCccc-ccCCEEEEEEEeeecCCccEEEEEEcCCc-----cceeEe--ccceeCCCC---Cceeece
Confidence 544433334456777775 57999999987765554456678888884 899875 466543322 3456788
Q ss_pred eEeecCCCeEEEEEeee
Q 011094 259 TAWAGPDGKWRLTIGSK 275 (494)
Q Consensus 259 V~w~~~dg~w~MviGa~ 275 (494)
+ +. -+++|+|+++..
T Consensus 194 l-f~-l~~~~vl~~s~~ 208 (294)
T d1uypa2 194 L-VR-IGEKDILIYSIT 208 (294)
T ss_dssp E-EE-ETTEEEEEEEET
T ss_pred E-EE-eCCeeEEEEEec
Confidence 7 43 578999998754
|
| >d1gyha_ b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: alpha-L-arabinanase species: Cellvibrio cellulosa [TaxId: 155077]
Probab=97.68 E-value=8.2e-05 Score=70.77 Aligned_cols=150 Identities=14% Similarity=0.075 Sum_probs=81.2
Q ss_pred ceEECCEEEEEEeeCCCCCCCCCcEEEEEEec----CccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEeccC
Q 011094 136 PLFYKGWYHLFYQYNPDSAVWGNITWGHAVSA----DLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGST 211 (494)
Q Consensus 136 ~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~----DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~ 211 (494)
+++++|+|||||-....+.....+..+.+.+. ...+|+..+..+......+......++++++.||+.+|+|.+..
T Consensus 69 v~~~~g~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iDp~v~~d~dG~~Yl~~~~~~ 148 (318)
T d1gyha_ 69 IYQHKGLFYLYYSVSAFGKNTSAIGVTVNKTLNPASPDYRWEDKGIVIESVPQRDLWNAIAPAIIADDHGQVWMSFGSFW 148 (318)
T ss_dssp EEEETTEEEEEEEECCTTSCCEEEEEEEESCSCTTSTTCCCEEEEEEEEECTTTCSSCCCCCEEEECTTSCEEEEECBST
T ss_pred EEEEcCceEEEEEEecCCCcccceeEEEEeccCCCccccccccCceecccCCCCCCCceEccceEeecCCcEEEeccCCC
Confidence 68889999999987654433223333333332 24789988866544433333334567888888999999987643
Q ss_pred CCccceEEEEEEc-CCCC-CCcceEEEc--CCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-C----CeeEE
Q 011094 212 DKSVQVQNLAYPA-DPSD-PLLLDWVKY--PGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-G----KTGIS 282 (494)
Q Consensus 212 ~~~~q~q~lA~S~-D~~d-~lL~~W~K~--~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-~----~~G~v 282 (494)
.. +.++... +... .....+... ...+++....+.....+-.|.+ ++ .+|+|+|++.+.. . ....+
T Consensus 149 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~EgP~i-~k-~~g~yyl~yS~~~~~~~~~~~y~~ 222 (318)
T d1gyha_ 149 GG----LKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEAPFI-LR-KGDYYYLFASWGLCCRKGDSTYHL 222 (318)
T ss_dssp TC----EEEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTTSCCSCCEEEEEE-EE-ETTEEEEEEEESCCSCGGGCCCEE
T ss_pred CC----eeeEecCccceeeccccccccccccccceeeccCCCCCceeecCEE-EE-ECCEEEEEEecCCCCCCCccccee
Confidence 22 2222221 1100 000122221 1122222222222223346887 44 6899999987542 1 12356
Q ss_pred EEEEeCCCC
Q 011094 283 LVYQTTDFK 291 (494)
Q Consensus 283 ~lY~S~Dl~ 291 (494)
.+++|+++.
T Consensus 223 ~~~~s~~~~ 231 (318)
T d1gyha_ 223 VVGRSKQVT 231 (318)
T ss_dssp EEEEESSTT
T ss_pred eeecccCCC
Confidence 677888765
|
| >d2b4wa1 b.67.2.5 (A:2-311) Hypothetical protein LmjF10.1260 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: LmjF10.1260-like domain: Hypothetical protein LmjF10.1260 species: Leishmania major [TaxId: 5664]
Probab=97.47 E-value=0.00024 Score=69.24 Aligned_cols=140 Identities=10% Similarity=0.046 Sum_probs=94.8
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEeccC
Q 011094 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGST 211 (494)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~ 211 (494)
.|..++.++|+|||+++-.... .|...+.+.+++.+..+|+..|. . .-|+-...++. .+|+++|-||...
T Consensus 31 N~~apf~~~Gk~~l~~RvE~rd-~~s~s~v~lf~~~g~~~f~~~~~-----p---~~glEDPrvt~-i~g~lv~~~t~~~ 100 (310)
T d2b4wa1 31 NCSVPFSYKGKTHIYGRVEKRD-IWAASHVRLFEETGKDEFTAVPE-----L---SWELEDPYIAK-INNEMIFGGTRVR 100 (310)
T ss_dssp SCCCCEEETTEEEEEEEEECTT-CSSCCEEEEEEEEETTEEEECTT-----C---CBSCEEEEEEE-ETTEEEEEEEEEC
T ss_pred cCCcEEEECCEEEEEEEEEccC-cceEEEEEEEEecCCcceEECCc-----c---cccCCCCCEEe-ECCEEEEEEEEec
Confidence 4777889999999999987654 45667778889999999987552 1 13778888875 6899999999776
Q ss_pred CCccceEEEEEEcCCCCCCcceEEEcCCCceec-CCCCCCCCCCCCCeeEeecCCCeEEEEEeeecCCeeEEEEEEeCCC
Q 011094 212 DKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLV-PPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDF 290 (494)
Q Consensus 212 ~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~-~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~~~~G~v~lY~S~Dl 290 (494)
... ...++|++.+ ++.|.+. -|++. .|++ .+|=.+ ....+|+|.|+.--+....|.+.+..++||
T Consensus 101 ~~~-~~~~~~~t~~-----~r~~~~~--l~~f~~gp~~-----~Kdi~L-~e~~dGKy~~ftRP~~g~~g~Ig~~~~d~l 166 (310)
T d2b4wa1 101 KNG-NAILSYYGYF-----YRGTPDE--LTYFTRGPGC-----MKDIRV-LQLQDGRLGVFSRPRVGRKASIGFVILNSI 166 (310)
T ss_dssp ------CCCEEEEE-----EEEETTE--EEEEEECCTT-----CCCCEE-EECTTSCEEEEECCCC---CCEEEEEESCG
T ss_pred CCC-CcceEEEeee-----eecchhc--CceeecCCCc-----cccEEe-EEeeCCEEEEEEccccCCCCeeEEEEeCCh
Confidence 432 3445676665 2555532 35544 3333 245444 345799999998655445567778889999
Q ss_pred CCCEE
Q 011094 291 KTYEL 295 (494)
Q Consensus 291 ~~W~~ 295 (494)
.+|+.
T Consensus 167 ~~~t~ 171 (310)
T d2b4wa1 167 DELGA 171 (310)
T ss_dssp GGCSH
T ss_pred hhCCH
Confidence 99974
|
| >d2exha2 b.67.2.1 (A:3-324) Beta-D-xylosidase N-terminal domain {Geobacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Geobacillus stearothermophilus [TaxId: 1422]
Probab=97.20 E-value=0.0036 Score=59.90 Aligned_cols=150 Identities=13% Similarity=0.126 Sum_probs=78.8
Q ss_pred CcccCCccceEECCEEEEEEeeCCCC-CCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEE
Q 011094 128 NWMNDPNGPLFYKGWYHLFYQYNPDS-AVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVM 205 (494)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~-~~wg~~~WGHA~S~DLv-hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~ 205 (494)
+.+--|. +.+++|+|||||...... ..+.+..-..++|++.- -|++ +..+.. .-...+++++.||+.+|
T Consensus 69 ~~~WAPe-v~~~~G~yylyys~~~~~~~~~~~~~~~~~~sd~~~gp~~~-~~~~~~-------~~~dp~~f~d~dG~~Yl 139 (322)
T d2exha2 69 GGVWAPH-LSYSDGKFWLIYTDVKVVEGQWKDGHNYLVTCDTIDGAWSD-PIYLNS-------SGFDPSLFHDEDGRKYL 139 (322)
T ss_dssp CBBCSCE-EEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTSCCCC-CEECCC-------SCSCCEEEECTTSCEEE
T ss_pred CCcccce-EEEECCEEEEEEEeecccCCCccccceEEEecCCCCCCccc-ceEecC-------CCCCCCeEEEcCCCEEE
Confidence 3445576 788999999999754332 22223333455555543 4543 222211 11345677788999999
Q ss_pred EEeccCCC--ccceEEEEEEcCCCCCCcceEEEcCCCceec-CCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-CCeeE
Q 011094 206 LYTGSTDK--SVQVQNLAYPADPSDPLLLDWVKYPGNPVLV-PPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGI 281 (494)
Q Consensus 206 ~YTG~~~~--~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~-~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-~~~G~ 281 (494)
+|.+.... ......+....... ..++.. ..|... ... .....-.|++ ++ .+|.|||++.+.. +..=+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~--~~~~~Egp~i-~k-~~g~YYl~~s~~~~~~~y~ 210 (322)
T d2exha2 140 VNMYWDHRVDHHPFYGIVLQEYSV----EQKKLV-GEPKIIFKGT--DLRITEGPHL-YK-INGYYYLLTAEGGTRYNHA 210 (322)
T ss_dssp EEEEECCCTTSCSEEEEEEEEEET----TTTEEE-EEEEEEECCC--TTCCCEEEEE-EE-ETTEEEEEEEESCSSTTCE
T ss_pred EecccCCccCcCCccceEEeeecC----cCCeEC-CCcEEEEEec--CCCcccCcEE-EE-ECCEEEEEEeCCCCCCCce
Confidence 98765432 11122232221111 112222 123221 111 1123457888 44 5899999987542 22236
Q ss_pred EEEEEeCCCC-CCEE
Q 011094 282 SLVYQTTDFK-TYEL 295 (494)
Q Consensus 282 v~lY~S~Dl~-~W~~ 295 (494)
+.+++|+++. -|+.
T Consensus 211 v~~~rS~~~~GP~~~ 225 (322)
T d2exha2 211 ATIARSTSLYGPYEV 225 (322)
T ss_dssp EEEEEESSTTCCCEE
T ss_pred EEEEEeCCCCccccc
Confidence 7788999865 3654
|
| >d1wl7a1 b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermodenitrificans [TaxId: 33940]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Arabinanase-TS species: Bacillus thermodenitrificans [TaxId: 33940]
Probab=97.13 E-value=0.0018 Score=61.53 Aligned_cols=141 Identities=16% Similarity=0.169 Sum_probs=79.6
Q ss_pred ceEECCEEEEEEeeCCCCCCCCCcEEEEEEec-----C-ccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEec
Q 011094 136 PLFYKGWYHLFYQYNPDSAVWGNITWGHAVSA-----D-LIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTG 209 (494)
Q Consensus 136 ~~y~~G~YHLFYQ~nP~~~~wg~~~WGHA~S~-----D-LvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG 209 (494)
+++++|+|||||..+..+. +....+.+++. + ...|+..++.+.+... +.......+++.+.||+.+++|.+
T Consensus 87 v~~~~g~yyl~~t~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~iD~~~f~d~dG~~y~~~~~ 163 (312)
T d1wl7a1 87 ICFYNGIYYLYYSVSTFGK--NTSVIGLATNRTLDPRDPDYEWKDMGPVIHSTAS-DNYNAIDPNVVFDQEGQPWLSFGS 163 (312)
T ss_dssp EEEETTEEEEEEEECCTTC--CCEEEEEEEESCSCTTSTTCCCEEEEEEEEECTT-SSSCCCSCEEEECTTSCEEEEECB
T ss_pred EEEeCCEEEEEEEeecCCc--ccceeeEEEEecccCCCCccccccccceecCCCC-CCCCcCCCceeEccCCcEEEeecC
Confidence 7888999999999876542 34445555432 1 3457766554443332 233456778888889999999976
Q ss_pred cCCCccceEEEEEE-cCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-----CCeeEEE
Q 011094 210 STDKSVQVQNLAYP-ADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----GKTGISL 283 (494)
Q Consensus 210 ~~~~~~q~q~lA~S-~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-----~~~G~v~ 283 (494)
... .+.++.- .|. ..... +...+.....+....-+--|++ ++ .+|+|||++.+.. ....++.
T Consensus 164 ~~~----~i~~~~l~~d~-----~~~~~-~~~~i~~~~~~~~~~~~EgP~v-~k-~~g~yYl~ys~~~~~~~~~~~~~~~ 231 (312)
T d1wl7a1 164 FWS----GIQLIQLDTET-----MKPAA-QAELLTIASRGEEPNAIEAPFI-VC-RNGYYYLFVSFDFCCRGIESTYKIA 231 (312)
T ss_dssp STT----CEEEEEBCTTT-----CSBCT-TCCCEEEECCSSSSCCEEEEEE-EE-ETTEEEEEEEESCCSSGGGCCCEEE
T ss_pred CCC----ceeEEEEcCcC-----CcCcC-CceEEEecccCCCCCcccccEE-EE-ECCcEEEEEecCCCcCCCCCCceEE
Confidence 432 1233322 221 11111 1122322222222223457888 44 6899999987542 1223677
Q ss_pred EEEeCCCC
Q 011094 284 VYQTTDFK 291 (494)
Q Consensus 284 lY~S~Dl~ 291 (494)
+++|+++.
T Consensus 232 ~a~s~~~~ 239 (312)
T d1wl7a1 232 VGRSKDIT 239 (312)
T ss_dssp EEEESSTT
T ss_pred EEecCCCC
Confidence 88998865
|
| >d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Bacillus halodurans [TaxId: 86665]
Probab=96.55 E-value=0.014 Score=55.29 Aligned_cols=136 Identities=12% Similarity=-0.019 Sum_probs=77.5
Q ss_pred cccCCccceEE-CCEEEEEEeeCCCCCCCCC--cEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEE
Q 011094 129 WMNDPNGPLFY-KGWYHLFYQYNPDSAVWGN--ITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVM 205 (494)
Q Consensus 129 wmNDPNG~~y~-~G~YHLFYQ~nP~~~~wg~--~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~ 205 (494)
+.-||. ++++ +|+.+|+|........... .......+.|...-...+..+... ...++.-|..++..+|+++|
T Consensus 123 ~~iDp~-~f~D~dG~~Yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Egp~i~k~~g~yyl 198 (317)
T d1yrza2 123 SGFDPS-LFHDDDGRKWLVNMIWDYRKGNHPFAGIILQEYSEAEQKLVGPVKNIYKG---TDIQLTEGPHLYKKDGYYYL 198 (317)
T ss_dssp SCSCCE-EEECTTSCEEEEEEEECCCTTSCSEEEEEEEEEETTTTEEEEEEEEEECC---CTTCCCEEEEEEEETTEEEE
T ss_pred CccCCc-EEEecCCCEEEEEeccCcCCCCccccceeeeecCcccCeEcCCceEEEec---cCCCcccCceEEEECCEEEE
Confidence 345997 5554 7888777754433221111 112223345544333333323222 13456778888889999999
Q ss_pred EEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCC---CCCeeEeecCCCeEEEEEee
Q 011094 206 LYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDF---RDPTTAWAGPDGKWRLTIGS 274 (494)
Q Consensus 206 ~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~f---RDP~V~w~~~dg~w~MviGa 274 (494)
+|.+........+++|+|++. +..|++.+.+|++....... ..+ .-..+ +..++|+|+|+.-+
T Consensus 199 ~~s~~~~~~~y~v~~~~s~~~----~Gp~~~~~~~p~~~~~~~~~-~~~~g~GH~s~-~~~~dG~~~~~~h~ 264 (317)
T d1yrza2 199 LVAEGGTEYEHAATLARSQSI----DGPYETDPSYPLVTSTGQPE-LALQKAGHGSL-VETQNGEWYLAHLC 264 (317)
T ss_dssp EEEESCSSTTCEEEEEEESST----TCCCEECTTCCSEECTTCTT-CSSEEEEEEEE-EECTTSCEEEEEEE
T ss_pred EEccCCCCCcceEEEEEECCC----CCccccCCCcceeccCCCCc-CCcccCCccEE-EECCCCeEEEEEEE
Confidence 999765444456788999775 35788888899986432110 011 11233 44567888877643
|
| >d1y7ba2 b.67.2.1 (A:4-324) Beta-D-xylosidase N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Clostridium acetobutylicum [TaxId: 1488]
Probab=96.52 E-value=0.014 Score=55.22 Aligned_cols=137 Identities=9% Similarity=-0.090 Sum_probs=82.4
Q ss_pred cccCCccceEECCEEEEEEeeCCCCCCCCC--cEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEE
Q 011094 129 WMNDPNGPLFYKGWYHLFYQYNPDSAVWGN--ITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML 206 (494)
Q Consensus 129 wmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~--~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~ 206 (494)
...||+-++-.+|+.+++|-....+...+. .......+.|..+....+..+.... ......|..++..+|.++|+
T Consensus 122 ~~~D~~~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Egp~v~k~~g~yyl~ 198 (321)
T d1y7ba2 122 SGFDASLFHDNDGKKYLVNMYWDQRTYNHNFYGIVLQEYSDKEKKLIGKAKIIYKGT---DIKYTEGPHIYHIGDYYYLF 198 (321)
T ss_dssp SCSCCEEEECTTSCEEEEEEEECCCTTSCSEEEEEEEEEETTTTEEEEEEEEEECCC---TTCCCEEEEEEEETTEEEEE
T ss_pred cccCCcEEEEcCCCEEEEEeccCCCccccCccceeeEeeCCCcceEcCCceEEeecc---CCCccccceEEEECCEEEEE
Confidence 456887333347888887754333333322 2344555788888877665554332 12345677777789999999
Q ss_pred EeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCC---CCeeEeecCCCeEEEEEee
Q 011094 207 YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFR---DPTTAWAGPDGKWRLTIGS 274 (494)
Q Consensus 207 YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fR---DP~V~w~~~dg~w~MviGa 274 (494)
|+.........+..|+|++. +..|++.+.+|++.....-. ..+. -..+ +..++|+|+|+.-+
T Consensus 199 ~s~~~~~~~y~~~~~rs~~~----~Gp~~~~~~~p~~~~~~~~~-~~~~g~GH~~~-v~~~~g~~~~~~h~ 263 (321)
T d1y7ba2 199 TAEGGTTYEHSETVARSKNI----DGPYEIDPEYPLLTSWHDPR-NSLQKCGHASL-VHTHTDEWYLAHLV 263 (321)
T ss_dssp EEESCSSTTCEEEEEEESST----TCCCEECTTCCSEECTTCTT-CSSEEEEEEEE-EECTTSCEEEEEEE
T ss_pred EcCCCCCCCcceEEEEEccc----CCccccCCCCceeeeecCCC-CCcccCCEEEE-EECCCCCEEEEEEe
Confidence 98875444466788888775 36788888899886421100 0111 1123 34567788877643
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Probab=95.87 E-value=0.059 Score=54.34 Aligned_cols=144 Identities=14% Similarity=0.150 Sum_probs=83.3
Q ss_pred ECCEEEEEEeeCCCCCCCCCc----EEEE-EEecCccCee---ecceeccCCCC-cC---------------CCcEEeee
Q 011094 139 YKGWYHLFYQYNPDSAVWGNI----TWGH-AVSADLIHWL---YLPIAMVPDQW-YD---------------INGVWTGS 194 (494)
Q Consensus 139 ~~G~YHLFYQ~nP~~~~wg~~----~WGH-A~S~DLvhW~---~~p~AL~Pd~~-~D---------------~~Gv~SGS 194 (494)
.+|+++|||.-+-.... +.. .-++ ++|.+.+.|+ ..++.+.||.. |. ....-...
T Consensus 138 ~DG~~~LfYTg~~~~~~-~~q~i~~a~~~~~~d~~~~~~~~~~~~~~l~~pDG~~Yqt~~q~~~~~~~~~~d~~~fRDP~ 216 (440)
T d1oyga_ 138 SDGKIRLFYTDFSGKHY-GKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPH 216 (440)
T ss_dssp TTSCEEEEEEEEEGGGT-TEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCCEEEE
T ss_pred cCCeEEEEEEeccCCCC-CcceEEEEEEEEeecCCcceeecccCCceeecCCCccceeeecccccCCCCCCCcccccCCc
Confidence 58999999985422111 111 2233 3455555543 44567778753 31 22345777
Q ss_pred EEEccCCeEEEEEeccCCCc-----------------------------------------cceEEEEE-EcCCCCCCcc
Q 011094 195 ATILPDGQIVMLYTGSTDKS-----------------------------------------VQVQNLAY-PADPSDPLLL 232 (494)
Q Consensus 195 avv~~dG~~~~~YTG~~~~~-----------------------------------------~q~q~lA~-S~D~~d~lL~ 232 (494)
++. .+|+.+|+|.|++... ...+++++ +.| +.
T Consensus 217 v~~-~~g~~y~~fegn~~~~~G~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~ng~I~l~~~s~D-----~~ 290 (440)
T d1oyga_ 217 YVE-DKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDD-----YT 290 (440)
T ss_dssp EEE-ETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTT-----SS
T ss_pred eee-eCCeEEEEEeccccccccccccchhccccccccccccccccccccccccccccceeccceEEEEEeCCC-----cc
Confidence 654 6899999999875310 01244554 333 47
Q ss_pred eEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeeec-----C---Cee-EEEEEEeCCCC-CCEE
Q 011094 233 DWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----G---KTG-ISLVYQTTDFK-TYEL 295 (494)
Q Consensus 233 ~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-----~---~~G-~v~lY~S~Dl~-~W~~ 295 (494)
.|+.. .|++..... ...+-.|.++ + .+|+|||+..++. + ..+ .+..|.|+.+. .|+-
T Consensus 291 ~We~~--~pLl~a~~v--~d~~ErP~I~-~-~nGKYYLFtss~~~~~a~~~~~~~~~~~~g~Vsdsl~Gpy~P 357 (440)
T d1oyga_ 291 LKKVM--KPLIASNTV--TDEIERANVF-K-MNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYKP 357 (440)
T ss_dssp EEEEE--EEEEECTTT--CSCCEEEEEE-E-ETTEEEEEEEEEGGGCCCTTCCTTCEEEEEEEESSTTCCCEE
T ss_pred cceec--CcceeccCC--CCeEECCEEE-E-ECCEEEEEEecccccccCCCcCCCCceEEEEECCCCCCCCee
Confidence 89987 577765322 1234678884 3 6899999987642 1 112 34467776654 4653
|
| >d1w8oa3 b.68.1.1 (A:47-402) Micromonospora sialidase, N-terminal domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Micromonospora sialidase, N-terminal domain species: Micromonospora viridifaciens [TaxId: 1881]
Probab=92.88 E-value=0.19 Score=45.97 Aligned_cols=104 Identities=17% Similarity=0.096 Sum_probs=62.8
Q ss_pred EE-eeeEEEccCCeEEEEEeccCC----CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecC
Q 011094 190 VW-TGSATILPDGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGP 264 (494)
Q Consensus 190 v~-SGSavv~~dG~~~~~YTG~~~----~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~ 264 (494)
+| ..+++..+||.++++|.+... .....+.+.+|.|++ ++|++. ..|...+.+.....+.+|.++....
T Consensus 20 ~~RiPslv~~~~G~lla~~~~r~~~~~d~~~~~i~~~rS~D~G----~TWs~~--~~v~~~~~~~~~~~~~~~~~v~~~~ 93 (356)
T d1w8oa3 20 NYRIPALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGG----RTWGEQ--QVVSAGQTTAPIKGFSDPSYLVDRE 93 (356)
T ss_dssp CEEEEEEEECTTSCEEEEEEECTTSCSTTSCCEEEEEEESSTT----SSCCCC--EEEECCBCSSSCBEEEEEEEEECTT
T ss_pred eeEeCEEEEECCCCEEEEEeeeeCCCCCCCCceEEEEEccCCC----CCCCCC--EEeecCCCCCcccccccceEEEeCC
Confidence 46 577777789999999976432 234567788999986 899753 2232333222334566888755555
Q ss_pred CCeEEEEEeeec---------------CCeeEEEEEEeCC-CCCCEEcCcc
Q 011094 265 DGKWRLTIGSKI---------------GKTGISLVYQTTD-FKTYELLDEY 299 (494)
Q Consensus 265 dg~w~MviGa~~---------------~~~G~v~lY~S~D-l~~W~~~~~l 299 (494)
+|.-+++..... .....+.+++|+| ..+|.....+
T Consensus 94 ~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~~~~~ 144 (356)
T d1w8oa3 94 TGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRTIT 144 (356)
T ss_dssp TCCEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEESSTTSSCEEEECG
T ss_pred CCeEEEEEeeeccCCcccccccCCCCCCcEEEEEEEecCCccccccccccc
Confidence 676444433221 0112456777766 6899875544
|
| >d3sila_ b.68.1.1 (A:) Salmonella sialidase {Salmonella typhimurium, strain lt2 [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Salmonella sialidase species: Salmonella typhimurium, strain lt2 [TaxId: 90371]
Probab=85.04 E-value=2.4 Score=39.75 Aligned_cols=104 Identities=15% Similarity=0.137 Sum_probs=60.3
Q ss_pred EE-eeeEEEccCCeEEEEEeccCC----CccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecC
Q 011094 190 VW-TGSATILPDGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGP 264 (494)
Q Consensus 190 v~-SGSavv~~dG~~~~~YTG~~~----~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~ 264 (494)
+| ..+.+..++|.+++++.+... .....+.++.|.|++ ++|++. ..|...+.......+.||..++...
T Consensus 32 ~yRiP~L~~~~~G~llA~~e~R~~~~~d~~~~div~~rS~DgG----kTWs~~--~~i~~~~~~~~~~~~~~p~~v~~~~ 105 (379)
T d3sila_ 32 YFRIPAMCTTSKGTIVVFADARHNTASDQSFIDTAAARSTDGG----KTWNKK--IAIYNDRVNSKLSRVMDPTCIVANI 105 (379)
T ss_dssp EEEEEEEEECTTCCEEEEEEEESSCSCSSSCEEEEEEEESSSS----SCCEEE--EEECCCCSCTTTCEEEEEEEEEEEE
T ss_pred eEeccEEEEECCCcEEEEEeeEECCCCCCCCceEEEEEecCCc----cCCCCC--EEccCCCCCccccccCCccEEEECC
Confidence 45 677776789999999976432 123334567899986 899874 2333322222334567898766656
Q ss_pred CCeEEEE-Eee-ec--------------CCeeEEEEEEe-CCCCCCEEcCcc
Q 011094 265 DGKWRLT-IGS-KI--------------GKTGISLVYQT-TDFKTYELLDEY 299 (494)
Q Consensus 265 dg~w~Mv-iGa-~~--------------~~~G~v~lY~S-~Dl~~W~~~~~l 299 (494)
+|.-.++ +.. .. ...-.+.+++| +|...|.....+
T Consensus 106 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~g~tw~~p~~~ 157 (379)
T d3sila_ 106 QGRETILVMVGKWNNNDKTWGAYRDKAPDTDWDLVLYKSTDDGVTFSKVETN 157 (379)
T ss_dssp TTEEEEEEEEEEESSCCSCGGGCCSSSSCTTCEEEEEEESSTTSCCEEECCS
T ss_pred CCCEEEEEEEEecCCCCCccccccccCCCCceeEEEEecCccccccccCccc
Confidence 6654433 221 11 01113445555 557899875544
|
| >d2b4wa1 b.67.2.5 (A:2-311) Hypothetical protein LmjF10.1260 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: LmjF10.1260-like domain: Hypothetical protein LmjF10.1260 species: Leishmania major [TaxId: 5664]
Probab=84.64 E-value=0.21 Score=47.82 Aligned_cols=96 Identities=11% Similarity=0.028 Sum_probs=60.1
Q ss_pred CcEEeeeEEEccCCeEEEEEeccCCCc--cceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCC
Q 011094 188 NGVWTGSATILPDGQIVMLYTGSTDKS--VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPD 265 (494)
Q Consensus 188 ~Gv~SGSavv~~dG~~~~~YTG~~~~~--~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~d 265 (494)
..||-.+|.+..+|+++|+|--..++. ...++++.+.+. .+|+..+ +|+. ..-||++.+ .+
T Consensus 27 ~DVyN~~apf~~~Gk~~l~~RvE~rd~~s~s~v~lf~~~g~-----~~f~~~~-~p~~---------glEDPrvt~--i~ 89 (310)
T d2b4wa1 27 YDVYNCSVPFSYKGKTHIYGRVEKRDIWAASHVRLFEETGK-----DEFTAVP-ELSW---------ELEDPYIAK--IN 89 (310)
T ss_dssp CEEESCCCCEEETTEEEEEEEEECTTCSSCCEEEEEEEEET-----TEEEECT-TCCB---------SCEEEEEEE--ET
T ss_pred cceecCCcEEEECCEEEEEEEEEccCcceEEEEEEEEecCC-----cceEECC-cccc---------cCCCCCEEe--EC
Confidence 449998886667999999998665543 233445444443 6777764 5653 334999975 47
Q ss_pred CeEEEEEeeecCCeeEEEEEEeCCCCCCEEcCccc
Q 011094 266 GKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL 300 (494)
Q Consensus 266 g~w~MviGa~~~~~G~v~lY~S~Dl~~W~~~~~ll 300 (494)
|+|+|-..+...+.+.+.+|++.|++.|+.....+
T Consensus 90 g~lv~~~t~~~~~~~~~~~~~t~~~r~~~~~l~~f 124 (310)
T d2b4wa1 90 NEMIFGGTRVRKNGNAILSYYGYFYRGTPDELTYF 124 (310)
T ss_dssp TEEEEEEEEEC-----CCCEEEEEEEEETTEEEEE
T ss_pred CEEEEEEEEecCCCCcceEEEeeeeecchhcCcee
Confidence 88876543333333456688899988886444444
|
| >d2ah2a2 b.68.1.1 (A:1-399) Trypanosoma sialidase {Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Trypanosoma sialidase species: Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]
Probab=82.26 E-value=2.6 Score=40.73 Aligned_cols=84 Identities=18% Similarity=0.220 Sum_probs=48.7
Q ss_pred EEccCCeEEEEEeccCCCccceEEEEEEcCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeEeecCCCeEEEEEeee
Q 011094 196 TILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (494)
Q Consensus 196 vv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p~g~~~~~fRDP~V~w~~~dg~w~MviGa~ 275 (494)
+...+|++++=..+........-.+.||+|.+ .+|+.-+. +- +. ....|.|. ..||+-+|.+..
T Consensus 183 i~~~~GrLv~p~~~~~~~~~~~s~~iySdD~G----~TW~~g~~--~~--~~-----~~~~~~v~--~~dG~lll~~R~- 246 (399)
T d2ah2a2 183 IVASNGNLVYPVQVTNKKKQVFSKIFYSEDEG----KTWKFGKG--RS--AF-----GCSEPVAL--EWEGKLIINTRV- 246 (399)
T ss_dssp EECTTSCEEEEEEEEETTCCEEEEEEEESSTT----SSCEECSC--CC--CT-----TCEEEEEE--EETTEEEEEEEC-
T ss_pred eeecCccEecceEeecCCCceEEEEEEeCCCC----ceeEeccc--cC--CC-----Ccccccee--ccCCeEEEEEec-
Confidence 44678998753332222333344566899986 89997532 21 11 12345553 357887776542
Q ss_pred cCCeeEEEEEEeCC-CCCCEEcC
Q 011094 276 IGKTGISLVYQTTD-FKTYELLD 297 (494)
Q Consensus 276 ~~~~G~v~lY~S~D-l~~W~~~~ 297 (494)
..|...+|+|.| .++|+..-
T Consensus 247 --~~g~r~v~~S~DgG~TW~~~~ 267 (399)
T d2ah2a2 247 --DYRRRLVYESSDMGNTWLEAV 267 (399)
T ss_dssp --TTSCCCEEEESSTTSSCEECT
T ss_pred --CCCceeEEEEcCCCccccccc
Confidence 234445688887 59998643
|
| >d1w0pa3 b.68.1.1 (A:217-346,A:544-777) Vibrio cholerae sialidase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Vibrio cholerae sialidase species: Vibrio cholerae [TaxId: 666]
Probab=81.40 E-value=13 Score=33.47 Aligned_cols=150 Identities=11% Similarity=-0.050 Sum_probs=77.1
Q ss_pred CCEEEEEEeeCCCCCCC----CCcEEEEEEecC-ccCeeecceeccCCCCcCCCcEEeeeEEEccC-CeEEEEEeccCCC
Q 011094 140 KGWYHLFYQYNPDSAVW----GNITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGVWTGSATILPD-GQIVMLYTGSTDK 213 (494)
Q Consensus 140 ~G~YHLFYQ~nP~~~~w----g~~~WGHA~S~D-LvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~d-G~~~~~YTG~~~~ 213 (494)
+|..--|+...+.+... +.+..--..|+| ..+|+...........-+.......+++++++ +.++++|+.....
T Consensus 19 ~g~~~a~~~~r~~~~~~~~~~~~~di~~~RS~DgGkTWs~~~~i~~~~~~~~~~~~~~p~~~~d~~~~~i~~~~~~~~~~ 98 (364)
T d1w0pa3 19 PGVVTAFAEKRVGGGDPGALSNTNDIITRTSRDGGITWDTELNLTEQINVSDEFDFSDPRPIYDPSSNTVLVSYARWPTD 98 (364)
T ss_dssp TTCEEEEEEEEETCSSTTCTTCEEEEEEEEESSSSSSCCCCEESSGGGCTTSCEEEEEEEEEEETTTTEEEEEEEEEETT
T ss_pred CCEEEEEEeeeeCCCCCcccCCcceEEEEEeCCCCcCCCCCEEeecCCCCCCcccccCCeEEEECCCCeEEEEEEecCCC
Confidence 57777776555444322 234567788999 89998643322222222334556667777665 5677777654211
Q ss_pred -----------ccceEEEEEEcCCCCCCcceEEEcCCCceecCC-CCCCCCCCCCCeeEeecCCCeEEEEEeeec-CCee
Q 011094 214 -----------SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP-RHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTG 280 (494)
Q Consensus 214 -----------~~q~q~lA~S~D~~d~lL~~W~K~~~nPVi~~p-~g~~~~~fRDP~V~w~~~dg~w~MviGa~~-~~~G 280 (494)
....+....|.|.+ .+|.+.. .+..+ .++.. ......+ ...+|++++...... ...+
T Consensus 99 ~~~~~~~~~~~~~~g~~~~~s~d~g----~tw~~~~---~~~~~~~~~~~-~~~~~~~--~~~~G~~~~~~~~~~~~~~~ 168 (364)
T d1w0pa3 99 AAQNGDRIKPWMPNGIFYSVYDVAS----GNWQAPI---VNPGPGHGITL-TRQQNIS--GSQNGRLIYPAIVLDRFFLN 168 (364)
T ss_dssp CCSGGGCCCTTSCCEEEEEEEETTT----TEECCCE---EECCSSCCEEC-CCCTTST--TCCTTCEEEEEEEESSSCEE
T ss_pred CCcccccccccccCcEEEEecCCCC----Ccccccc---cccccceeeee-cCCCccc--cccCCeEEEEEEeecCCCCc
Confidence 11234455677764 7886531 22211 11111 1111111 135677765544332 2333
Q ss_pred EEEEEEeCCCCCCEEcCcc
Q 011094 281 ISLVYQTTDFKTYELLDEY 299 (494)
Q Consensus 281 ~v~lY~S~Dl~~W~~~~~l 299 (494)
....+..++...|......
T Consensus 169 ~~~~~s~d~g~tw~~~~~~ 187 (364)
T d1w0pa3 169 VMSIYSDDGGSNWQTGSTL 187 (364)
T ss_dssp EEEEEESSSSSSCEECCCC
T ss_pred eeEEEeccCCcEEEecccc
Confidence 4445555668999886543
|
| >d1so7a_ b.68.1.1 (A:) Sialidase 2 (Neu2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Sialidase 2 (Neu2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.59 E-value=20 Score=32.46 Aligned_cols=91 Identities=8% Similarity=-0.010 Sum_probs=50.4
Q ss_pred CCEEEEEEeeCCCCCCCCCcEEEEEEecCc-c----CeeecceeccCCCCcCCCcEEeeeEEEc-cCCeEEEEEeccCC-
Q 011094 140 KGWYHLFYQYNPDSAVWGNITWGHAVSADL-I----HWLYLPIAMVPDQWYDINGVWTGSATIL-PDGQIVMLYTGSTD- 212 (494)
Q Consensus 140 ~G~YHLFYQ~nP~~~~wg~~~WGHA~S~DL-v----hW~~~p~AL~Pd~~~D~~Gv~SGSavv~-~dG~~~~~YTG~~~- 212 (494)
+|.+=.|+.-......++.+...-..|+|- - +|... ..|. +..-+...+..++.+++ ++|+++++|.....
T Consensus 28 g~~l~A~a~~r~~~~d~~~~~iv~~rS~D~G~T~~~~Ws~~-~~v~-~~~~~~~~~~~p~~~~d~~~g~i~l~~~~~~~~ 105 (374)
T d1so7a_ 28 QQSLLAFAEQRASKKDEHAELIVLRRGDYDAPTHQVQWQAQ-EVVA-QARLDGHRSMNPCPLYDAQTGTLFLFFIAIPGQ 105 (374)
T ss_dssp TTEEEEEEEECC-------CEEEEEEEEEEGGGTEEEECCC-EECT-TSCCTTEEEEEEEEEECTTTCCEEEEEEEEESS
T ss_pred CCEEEEEEeEEcCCccCCCCeEEEEEecCCCcccccccCCC-EEeE-CCCCCCceeeeeeEEEECCCCEEEEEEEeecCC
Confidence 355666664333333445566777789885 4 37643 3333 22223345667777665 47999999874321
Q ss_pred ----------CccceEEEEEEcCCCCCCcceEEE
Q 011094 213 ----------KSVQVQNLAYPADPSDPLLLDWVK 236 (494)
Q Consensus 213 ----------~~~q~q~lA~S~D~~d~lL~~W~K 236 (494)
.....+.+..|.|.+ .+|.+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~S~D~G----~TWs~ 135 (374)
T d1so7a_ 106 VTEQQQLQTRANVTRLCQVTSTDHG----RTWSS 135 (374)
T ss_dssp CCHHHHHCTTCCCCEEEEEEESSTT----SSCCC
T ss_pred CcccccccCCCCcccEEEEeCCCCc----ccccC
Confidence 123456678899976 88965
|