Citrus Sinensis ID: 011097

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490---
MAQSTAVSPCSSINLAFHAPKRGSLLYHDKLSFPRKLHSFQEFGSRASELNGRAVVSSTCNVIRACEPKAIQALLSSEREVESAPKSGGGRRGKLNKVVLAYSGGLDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDPENEPKKDMYMMSVDPEDAPNQPEYIEIGIVSGIPVSVNGKKLSPASLLAELNEIGGRHGIGRIDMVENRLVGMKSRGVYETPGGTILFSAVQELESLTLDRETMQVKDSLALKYAELVYAGRWFDPLRESIDAFMENITKTTTGSVTLKLYKGSVSVTGRTSPKSLYRQDISSFESGQIYDQADAAGFIRLYGLPMRVRAMLERGI
cccccccccccccccccccccccccCCcccccccccccHHHHcccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccEEEEEcccccHHHHHHHHHHHccccEEEEEEEEccccccccHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHcccEEEEccccccccccHHHHcccccccccEEEEECcccccccHHHHHHHHHHcccccccccccccccccccHHHHccccccccccccccHHHHHcccccccccccccEEEEEEECcCEEEEccccccHHHHHHHHHHHHHcccccccEEEcccccccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccEEEEEEEEEEEcccEEEEcccccccccccccccccccccccccccccHHHHccHHHHHHHHHHccc
************INLAFHAPKRGSLLYHDKLSFPRKLHSFQEFGS*ASELNGRAVVSSTCNVIRACEPKAIQAL********************LNKVVLAYSGGLDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDPENEPKKDMYMMSVDPEDAPNQPEYIEIGIVSGIPVSVNGKKLSPASLLAELNEIGGRHGIGRIDMVENRLVGMKSRGVYETPGGTILFSAVQELESLTLDRETMQVKDSLALKYAELVYAGRWFDPLRESIDAFMENITKTTTGSVTLKLYKGSVSVTGRTSPKSLYRQDISSFESGQIYDQADAAGFIRLYGLPMRVRAM*E***
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAQSTAVSPCSSINLAFHAPKRGSLLYHDKLSFPRKLHSFQEFGSRASELNGRAVVSSTCNVIRACEPKAIQALLSSEREVESAPKSGGGRRGKLNKVVLAYSGGLDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDPENEPKKDMYMMSVDPEDAPNQPEYIEIGIVSGIPVSVNGKKLSPASLLAELNEIGGRHGIGRIDMVENRLVGMKSRGVYETPGGTILFSAVQELESLTLDRETMQVKDSLALKYAELVYAGRWFDPLRESIDAFMENITKTTTGSVTLKLYKGSVSVTGRTSPKSLYRQDISSFESGQIYDQADAAGFIRLYGLPMRVRAMLERGI

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Argininosuccinate synthase, chloroplastic confidentQ9SZX3
Argininosuccinate synthase probableQ15X83
Argininosuccinate synthase probableB1H0L3

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
6.-.-.-Ligases.probable
6.3.-.-Forming carbon-nitrogen bonds.probable
6.3.4.-Other carbon--nitrogen ligases.probable
6.3.4.5Argininosuccinate synthase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1VL2, chain A
Confidence level:very confident
Coverage over the Query: 96-490
View the alignment between query and template
View the model in PyMOL
Template: 2DPL, chain A
Confidence level:confident
Coverage over the Query: 67-214,230-274
View the alignment between query and template
View the model in PyMOL
Template: 2WSI, chain A
Confidence level:confident
Coverage over the Query: 53-164,191-260
View the alignment between query and template
View the model in PyMOL