Citrus Sinensis ID: 011107
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 493 | 2.2.26 [Sep-21-2011] | |||||||
| Q70DU8 | 484 | Aldehyde dehydrogenase fa | yes | no | 0.969 | 0.987 | 0.707 | 0.0 | |
| Q8W033 | 550 | Aldehyde dehydrogenase fa | no | no | 0.983 | 0.881 | 0.628 | 1e-179 | |
| Q8VXQ2 | 479 | Aldehyde dehydrogenase OS | N/A | no | 0.961 | 0.989 | 0.620 | 1e-178 | |
| Q70E96 | 484 | Aldehyde dehydrogenase fa | no | no | 0.947 | 0.964 | 0.451 | 1e-124 | |
| P11883 | 453 | Aldehyde dehydrogenase, d | yes | no | 0.884 | 0.962 | 0.465 | 1e-113 | |
| Q60HH8 | 485 | Fatty aldehyde dehydrogen | N/A | no | 0.935 | 0.950 | 0.433 | 1e-110 | |
| Q5XI42 | 468 | Aldehyde dehydrogenase fa | no | no | 0.906 | 0.955 | 0.438 | 1e-110 | |
| P51648 | 485 | Fatty aldehyde dehydrogen | yes | no | 0.910 | 0.925 | 0.440 | 1e-110 | |
| Q5RF60 | 485 | Fatty aldehyde dehydrogen | yes | no | 0.910 | 0.925 | 0.440 | 1e-110 | |
| Q80VQ0 | 468 | Aldehyde dehydrogenase fa | yes | no | 0.906 | 0.955 | 0.436 | 1e-110 |
| >sp|Q70DU8|AL3H1_ARATH Aldehyde dehydrogenase family 3 member H1 OS=Arabidopsis thaliana GN=ALDH3H1 PE=2 SV=2 | Back alignment and function desciption |
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Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/478 (70%), Positives = 411/478 (85%)
Query: 12 EVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE 71
+VF + AS V ELR +F G T+ Y WRV+QLK LM + + EP+IV ALR DL KPE
Sbjct: 5 KVFGSAEASNLVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPE 64
Query: 72 LESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNY 131
LESS+YEV+LL+ SIK ALK+LK+WM PEKAKTS+TTFP+SAEIV EP GVVL+IS WNY
Sbjct: 65 LESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNY 124
Query: 132 PFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSAL 191
PFLLS+DPV+GAI+AGNA+VLKPSE+APASS+LL KL+ +Y+D S++RVVEGAV ETSAL
Sbjct: 125 PFLLSIDPVIGAISAGNAVVLKPSELAPASSALLTKLLEQYLDPSAVRVVEGAVTETSAL 184
Query: 192 LDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK 251
L+QKWDKI YTG+S++ R++MAAAAKHLTPV+LELGGKSPVV DS +LKV RR+I+GK
Sbjct: 185 LEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIVGK 244
Query: 252 WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLS 311
WGCNNGQAC+SPD+I+TTK+YAPKL++++K ELE FYGKNP+ESKD+SRIVNSNHF RLS
Sbjct: 245 WGCNNGQACVSPDYILTTKEYAPKLIDAMKLELEKFYGKNPIESKDMSRIVNSNHFDRLS 304
Query: 312 KLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 371
KLLD+ +VS KIV+GGE+D+ L+IAPT+LLDVP DSLIMSEEIFGPLLPILT++ +E+S
Sbjct: 305 KLLDEKEVSDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEES 364
Query: 372 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 431
FD+I S KPLAAYLFT+NKKLK++F TVSAGG+V+ND AVHLA+H+LPFGGV ESGMG
Sbjct: 365 FDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMG 424
Query: 432 AYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLG 489
AYHGKFSFD FSHKKAVL R GD VRYPPY++GKLRLLK L+ ++ + + LLG
Sbjct: 425 AYHGKFSFDAFSHKKAVLYRSLFGDSAVRYPPYSRGKLRLLKALVDSNIFDLFKVLLG 482
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Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|Q8W033|AL3I1_ARATH Aldehyde dehydrogenase family 3 member I1, chloroplastic OS=Arabidopsis thaliana GN=ALDH3I1 PE=2 SV=2 | Back alignment and function description |
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Score = 628 bits (1619), Expect = e-179, Method: Compositional matrix adjust.
Identities = 305/485 (62%), Positives = 388/485 (80%)
Query: 8 KKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDL 67
K++ F + A+L V ELR F SG+TKSY WR+SQL+++ +M++E+E I +AL QDL
Sbjct: 64 KEQASDFSGKEAALLVDELRSNFNSGRTKSYEWRISQLQNIARMIDEKEKCITEALYQDL 123
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KPELE+ + E++ K+S A+KELK+WM PE KTS+TTFPSSA+IV EP GVVL+IS
Sbjct: 124 SKPELEAFLAEISNTKSSCMLAIKELKNWMAPETVKTSVTTFPSSAQIVSEPLGVVLVIS 183
Query: 128 PWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAE 187
WN+PFLLS++PV+GAIAAGNA+VLKPSE+APA+SSLLAKL EY+D ++IRV+EG V E
Sbjct: 184 AWNFPFLLSVEPVIGAIAAGNAVVLKPSEIAPAASSLLAKLFSEYLDNTTIRVIEGGVPE 243
Query: 188 TSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRM 247
T+ALLDQKWDKI +TG +RVARI+MAAAA++LTPV+LELGGK P + DS +NL+VA RR+
Sbjct: 244 TTALLDQKWDKIFFTGGARVARIIMAAAARNLTPVVLELGGKCPALVDSDVNLQVAARRI 303
Query: 248 IMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHF 307
I GKW CN+GQACI D++ITTKD+A KL+++LK ELE F+G+N LESKDLSRIVNS HF
Sbjct: 304 IAGKWACNSGQACIGVDYVITTKDFASKLIDALKTELETFFGQNALESKDLSRIVNSFHF 363
Query: 308 ARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK 367
RL +L ++ V+ KIVHGG ++KL+I+PT+LLDVP S +M EEIFGPLLPI+TV K
Sbjct: 364 KRLESMLKENGVANKIVHGGRITEDKLKISPTILLDVPEASSMMQEEIFGPLLPIITVQK 423
Query: 368 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQE 427
IED F +I S KPLAAYLFTNNK+L++QFV+ VSAGG+ INDT +H+ V LPFGGV E
Sbjct: 424 IEDGFQVIRSKPKPLAAYLFTNNKELEKQFVQDVSAGGITINDTVLHVTVKDLPFGGVGE 483
Query: 428 SGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRAL 487
SG+GAYHGKFS++ FSHKK VL R F GD +RYPPYT K +LK L+S ++ I A
Sbjct: 484 SGIGAYHGKFSYETFSHKKGVLYRSFSGDADLRYPPYTPKKKMVLKALLSSNIFAAILAF 543
Query: 488 LGWSK 492
G+SK
Sbjct: 544 FGFSK 548
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Involved in oxidative stress tolerance by detoxifying reactive aldehydes derived from lipid peroxidation. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q8VXQ2|ALDH_CRAPL Aldehyde dehydrogenase OS=Craterostigma plantagineum GN=ALDH PE=1 SV=1 | Back alignment and function description |
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Score = 624 bits (1610), Expect = e-178, Method: Compositional matrix adjust.
Identities = 296/477 (62%), Positives = 379/477 (79%), Gaps = 3/477 (0%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
DAE V LR T+ SGKTKSY WRVSQLK+L+K+ + ++V+ALR DL KPE E+
Sbjct: 5 DAEGV---VDGLRRTYISGKTKSYEWRVSQLKALLKITTHHDKEVVEALRADLKKPEHEA 61
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFL 134
++E+ ++ + KSALKEL WM P+K KTS+ T+PSSAEIV EP GVVL+I+ WNYPFL
Sbjct: 62 YVHEIFMVSNACKSALKELHQWMKPQKVKTSLATYPSSAEIVSEPLGVVLVITAWNYPFL 121
Query: 135 LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQ 194
L+LDP++GAIAAGN +VLKPSE+APA+S+LLAKL+ +Y+D S+IRVVEGAV E ALLDQ
Sbjct: 122 LALDPMIGAIAAGNCVVLKPSEIAPATSALLAKLLNQYVDTSAIRVVEGAVPEMQALLDQ 181
Query: 195 KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC 254
+WDKI YTG+S+V +IV+++AAKHLTPV+LELGGK P V D+ I+LKVA RR+I KW
Sbjct: 182 RWDKIFYTGSSKVGQIVLSSAAKHLTPVVLELGGKCPTVVDANIDLKVAARRIISWKWSG 241
Query: 255 NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLL 314
N+GQ CISPD+IITT++ APKL++++K ELE+FYGK+PL+S+D+S I+N F R++ LL
Sbjct: 242 NSGQTCISPDYIITTEENAPKLVDAIKCELESFYGKDPLKSQDMSSIINERQFERMTGLL 301
Query: 315 DDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDI 374
DD KVS KIV+GG+ DK+ L+IAPT+LLDV DS +MSEEIFGPLLPI+TV KIE+ + I
Sbjct: 302 DDKKVSDKIVYGGQSDKSNLKIAPTILLDVSEDSSVMSEEIFGPLLPIITVGKIEECYKI 361
Query: 375 INSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYH 434
I S KPLAAYLFTN+KK ++FV VSAGG+ IND A+H LPFGGV ESGMG+YH
Sbjct: 362 IASKPKPLAAYLFTNDKKRTEEFVSNVSAGGITINDIALHFLEPRLPFGGVGESGMGSYH 421
Query: 435 GKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWS 491
GKFSFD FSHKK+VL R F G+V RYPPY KL ++ ++ G + G+++A LGWS
Sbjct: 422 GKFSFDAFSHKKSVLKRSFGGEVAARYPPYAPWKLHFMEAILQGDIFGLLKAWLGWS 478
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Oxidizes nonanal, propionaldehyde and acetaldehyde in vitro, in the following decreasing order of reactivity: nonanal, propionaldehyde, acetaldehyde. Craterostigma plantagineum (taxid: 4153) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q70E96|AL3F1_ARATH Aldehyde dehydrogenase family 3 member F1 OS=Arabidopsis thaliana GN=ALDH3F1 PE=2 SV=2 | Back alignment and function description |
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Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/470 (45%), Positives = 314/470 (66%), Gaps = 3/470 (0%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
++E+R TFASG+T+S WR +Q+ ++ +M+ + E I +AL QDL K E+ E+ ++
Sbjct: 12 LREMRETFASGRTRSLKWRKAQIGAIYEMVKDNEDKICNALFQDLGKHSTEAFRDELGVV 71
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
+ A+ L W P+ +K + +P+ +++ EP+G VL++S WN+P LSLDP++G
Sbjct: 72 LRTATVAINCLDKWAVPKHSKLPLLFYPAKGKVISEPYGTVLVLSSWNFPISLSLDPLIG 131
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGN ++LK SE++P +S+ LAK + Y+D +I+V+EG + LL +WDKI +T
Sbjct: 132 AIAAGNTVLLKSSELSPNASAFLAKTIPAYLDTKAIKVIEGGPDVATILLQHQWDKIFFT 191
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI---NLKVACRRMIMGKWGCNNGQA 259
G+ ++ RI+MAAAA+HLTPV LELGGK P + D N+K +R+ GKWG NGQA
Sbjct: 192 GSPKIGRIIMAAAAQHLTPVTLELGGKCPTIVDHHTISKNIKSVVKRIAGGKWGSCNGQA 251
Query: 260 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV 319
CIS D+++ K +AP L++ LK +++F+G+NP ES LSRI N +H RLS+LL D +V
Sbjct: 252 CISVDYVLIEKSFAPTLIDMLKPTIKSFFGENPKESGCLSRIANKHHVQRLSRLLSDPRV 311
Query: 320 SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 379
IV+GG D++KL + PT+LLD P DS IM+EEIFGP+LPI+TV I++S IIN+
Sbjct: 312 QASIVYGGSIDEDKLYVEPTILLDPPLDSEIMNEEIFGPILPIITVRDIQESIGIINTKP 371
Query: 380 KPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF 439
KPLA Y FTN++ LK + + S+G + ND + +LPFGGV ESG+G YHGK+SF
Sbjct: 372 KPLAIYAFTNDENLKTRILSETSSGSVTFNDVMIQYMCDALPFGGVGESGIGRYHGKYSF 431
Query: 440 DVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLG 489
D FSH+KA++ D+ RYPP+ KL +++ + +I +LG
Sbjct: 432 DCFSHEKAIMEGSLGMDLEARYPPWNNFKLTFIRLAFREAYFKLILLMLG 481
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Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P11883|AL3A1_RAT Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus GN=Aldh3a1 PE=1 SV=3 | Back alignment and function description |
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Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/443 (46%), Positives = 289/443 (65%), Gaps = 7/443 (1%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
VK R F SGKT+S +R+ QL++L +M+NE I AL DL K E S EVA +
Sbjct: 8 VKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHV 67
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
+ + +KEL W E + T I EP GVVL+I WNYPF L++ P+VG
Sbjct: 68 LEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVG 127
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
A+AAGNA++LKPSEV+ + LLA L+ +YMD + VV+G V ET+ LL +++D I YT
Sbjct: 128 AVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDHIMYT 187
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
G++ V +IVMAAAAKHLTPV LELGGKSP D +L VACRR+ GK+ N+GQ C++
Sbjct: 188 GSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQTCVA 246
Query: 263 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+I+ +++E LK L++FYG++ +S+D RI+N HF R+ L+D+ KV+
Sbjct: 247 PDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVA-- 304
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
HGG D++ IAPT+L+DV S +M EEIFGP++PI+ V +E++ IN KPL
Sbjct: 305 --HGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPL 362
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 442
A Y+F+NN+K+ ++ + S+GG+ ND VH+ V +LPFGGV SGMGAYHGK SF+ F
Sbjct: 363 ALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETF 422
Query: 443 SHKKAVLSRGFIGDVP--VRYPP 463
SH+++ L + + + RYPP
Sbjct: 423 SHRRSCLVKSLLNEEAHKARYPP 445
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ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. This protein preferentially oxidizes aromatic aldehyde substrates. It may play a role in the oxidation of toxic aldehydes. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 |
| >sp|Q60HH8|AL3A2_MACFA Fatty aldehyde dehydrogenase OS=Macaca fascicularis GN=ALDH3A2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/480 (43%), Positives = 303/480 (63%), Gaps = 19/480 (3%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
V+ +R F SG+++ +R+ QL++L +M+ ERE DI+ A+ DL K EL + EV +
Sbjct: 5 VQRVRQAFLSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLCKSELNAYSQEVITV 64
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
I L+ L W+T + K ++ T A I P+P GVVLII WNYPF+L + P++G
Sbjct: 65 LGEIDFMLENLPEWVTAKPVKKNLLTMMDEAYIQPQPLGVVLIIGAWNYPFVLIIQPLIG 124
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGNA+++KPSE++ ++ ++AKL+ +Y+D V+ G V ET+ LL Q++D I YT
Sbjct: 125 AIAAGNAVIIKPSELSENTAKIVAKLLPQYLDQDLYVVINGGVEETTELLKQRFDHIFYT 184
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
GN+ V +IVM AAAKHLTPV LELGGKSP D +L + CRR+ GK+ N GQ CI+
Sbjct: 185 GNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDKDCDLDIVCRRITWGKY-MNCGQTCIA 243
Query: 263 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+I+ +++ +K ++ FYG+N ES D RI+N HF R+ LL+ K++
Sbjct: 244 PDYILCEASLQSQIVWKIKETVKEFYGENIKESPDYERIINLRHFKRILSLLEGQKIA-- 301
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
GGE D+ IAPT+L DV + +M EEIFGP+LPI+ V ++++ D IN KPL
Sbjct: 302 --LGGETDEATRYIAPTVLTDVDPKTKVMQEEIFGPVLPIVPVKNVDEATDFINEREKPL 359
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 442
A Y+F++N KL ++ ++ S+GG+ ND +H ++S PFGGV SGMGAYHGK SFD F
Sbjct: 360 ALYVFSHNHKLIKRMIDETSSGGVTGNDVIMHFTLNSFPFGGVGSSGMGAYHGKHSFDTF 419
Query: 443 SHKKAVLSRGFI--GDVPVRYPPYTK-----GKLRLLKV-------LISGSLLGIIRALL 488
SH++ L + G +RYPP ++ GK LL+ L+ + LGI+ A+L
Sbjct: 420 SHQRPCLLKSLKREGANKLRYPPNSQSKVDWGKFFLLRRFNKEKLGLLVLTFLGIVAAVL 479
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Macaca fascicularis (taxid: 9541) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q5XI42|AL3B1_RAT Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus GN=Aldh3b1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/454 (43%), Positives = 291/454 (64%), Gaps = 7/454 (1%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
+++LR F +G+T+S +R +QL+ L L + + + +AL QDL K ES + E+A+
Sbjct: 8 LQQLREAFNAGRTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFESEVSEIAIS 67
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
+ + AL+ L+ WM EK ++ T SA I EPFG+VLII PWNYP L+L P+VG
Sbjct: 68 QAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIVPWNYPLNLTLVPLVG 127
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGN +VLKPSE++ A+ +LA+++ Y+D S VV G ET LL+ ++D I +T
Sbjct: 128 AIAAGNCVVLKPSEISKATEKILAEVLPRYLDQSCFAVVLGGPQETGQLLEHRFDYIFFT 187
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
GN+ V +IVMAAAAKHLTP+ LELGGK+P D + + R+ ++ N GQ C++
Sbjct: 188 GNTYVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDPQTVANRVAWFRY-FNAGQTCVA 246
Query: 263 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+++ +++ +L+ +L+N + FYG NP S +L RI+N HF RL LL G+
Sbjct: 247 PDYVLCSQEMQERLVPALQNAITRFYGDNPQTSPNLGRIINQKHFERLQGLLG----CGR 302
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
+ GG+ D+ + IAPT+L+DV +M EEIFGP+LP++TV ++++ + IN KPL
Sbjct: 303 VAIGGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVTNLDEAIEFINRREKPL 362
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 442
A Y F+ ++ +Q + S+GG ND +H+ + SLPFGGV SGMG YHGKFSFD F
Sbjct: 363 ALYAFSKRSQVIKQVLARTSSGGFCGNDGFMHMTLSSLPFGGVGTSGMGRYHGKFSFDTF 422
Query: 443 SHKKAVLSR--GFIGDVPVRYPPYTKGKLRLLKV 474
S+++A L R G +RYPPYT LR+L V
Sbjct: 423 SNQRACLLRSPGMEKINDLRYPPYTSRNLRVLLV 456
|
Oxidizes medium and long chain saturated and unsaturated aldehydes (By similarity). Metabolizes also benzaldehyde (By similarity). Low activity towards acetaldehyde and 3,4-dihydroxyphenylacetaldehyde (By similarity). May not metabolize short chain aldehydes (By similarity). May use both NADP(+) and NAD(+) as cofactors (By similarity). May have a protective role against the cytotoxicity induced by lipid peroxidation. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 |
| >sp|P51648|AL3A2_HUMAN Fatty aldehyde dehydrogenase OS=Homo sapiens GN=ALDH3A2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/461 (44%), Positives = 293/461 (63%), Gaps = 12/461 (2%)
Query: 20 SLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEV 79
L V+ +R F SG+++ +R+ QL++L +M+ ERE DI+ A+ DL K E EV
Sbjct: 2 ELEVRRVRQAFLSGRSRPLRFRLQQLEALRRMVQEREKDILTAIAADLCKSEFNVYSQEV 61
Query: 80 ALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDP 139
+ I L+ L W+T + K ++ T A I P+P GVVLII WNYPF+L++ P
Sbjct: 62 ITVLGEIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPLGVVLIIGAWNYPFVLTIQP 121
Query: 140 VVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKI 199
++GAIAAGNA+++KPSE++ ++ +LAKL+ +Y+D V+ G V ET+ LL Q++D I
Sbjct: 122 LIGAIAAGNAVIIKPSELSENTAKILAKLLPQYLDQDLYIVINGGVEETTELLKQRFDHI 181
Query: 200 CYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQA 259
YTGN+ V +IVM AAAKHLTPV LELGGKSP D +L + CRR+ GK+ N GQ
Sbjct: 182 FYTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDKDCDLDIVCRRITWGKY-MNCGQT 240
Query: 260 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV 319
CI+PD+I+ +++ +K ++ FYG+N ES D RI+N HF R+ LL+ K+
Sbjct: 241 CIAPDYILCEASLQNQIVWKIKETVKEFYGENIKESPDYERIINLRHFKRILSLLEGQKI 300
Query: 320 SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 379
+ GGE D+ IAPT+L DV + +M EEIFGP+LPI+ V ++++ + IN
Sbjct: 301 A----FGGETDEATRYIAPTVLTDVDPKTKVMQEEIFGPILPIVPVKNVDEAINFINERE 356
Query: 380 KPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF 439
KPLA Y+F++N KL ++ ++ S+GG+ ND +H ++S PFGGV SGMGAYHGK SF
Sbjct: 357 KPLALYVFSHNHKLIKRMIDETSSGGVTGNDVIMHFTLNSFPFGGVGSSGMGAYHGKHSF 416
Query: 440 DVFSHKKAVLSRGFI--GDVPVRYPPYTK-----GKLRLLK 473
D FSH++ L + G +RYPP ++ GK LLK
Sbjct: 417 DTFSHQRPCLLKSLKREGANKLRYPPNSQSKVDWGKFFLLK 457
|
Catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Active on a variety of saturated and unsaturated aliphatic aldehydes between 6 and 24 carbons in length. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q5RF60|AL3A2_PONAB Fatty aldehyde dehydrogenase OS=Pongo abelii GN=ALDH3A2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 399 bits (1025), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/461 (44%), Positives = 293/461 (63%), Gaps = 12/461 (2%)
Query: 20 SLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEV 79
L V+ +R F SG+++ +R+ QL++L +M+ ERE DI+ A+ DL K E EV
Sbjct: 2 ELEVRRVRQAFLSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLCKSEFNVYSQEV 61
Query: 80 ALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDP 139
+ I L+ L W+T + K ++ T A I P+P GVVLII WNYPF+L++ P
Sbjct: 62 ITVLGEIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPLGVVLIIGAWNYPFVLTIQP 121
Query: 140 VVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKI 199
++GAIAAGNA+++KPSE++ ++ +LAKL+ +Y+D V+ G V ET+ LL Q++D I
Sbjct: 122 LIGAIAAGNAVIIKPSELSENTAKMLAKLLPQYLDQDLYIVINGGVEETTELLKQRFDHI 181
Query: 200 CYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQA 259
YTGN+ V +IVM AAAKHLTPV LELGGKSP D +L + CRR+ GK+ N GQ
Sbjct: 182 FYTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDKDCDLDIVCRRITWGKY-MNCGQT 240
Query: 260 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV 319
CI+PD+I+ +++ +K ++ FYG+N ES D RI+N HF R+ LL+ K+
Sbjct: 241 CIAPDYILCEASLQNQIVWKIKETVKEFYGENIKESPDYERIINLRHFKRILSLLEGQKI 300
Query: 320 SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 379
+ GGE D+ IAPT+L DV + +M EEIFGP+LPI+ V ++++ + IN
Sbjct: 301 A----FGGETDEATRYIAPTVLTDVDPKTKVMQEEIFGPILPIVPVKNVDEAINFINERE 356
Query: 380 KPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF 439
KPLA Y+F++N KL ++ ++ S+GG+ ND +H ++S PFGGV SGMGAYHGK SF
Sbjct: 357 KPLALYVFSHNHKLIKRMIDETSSGGVTGNDVIMHFMLNSFPFGGVGSSGMGAYHGKHSF 416
Query: 440 DVFSHKKAVLSRGFI--GDVPVRYPPYTK-----GKLRLLK 473
D FSH++ L + G +RYPP ++ GK LLK
Sbjct: 417 DTFSHQRPCLLKSLKREGANKLRYPPNSQSKVDWGKFFLLK 457
|
Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q80VQ0|AL3B1_MOUSE Aldehyde dehydrogenase family 3 member B1 OS=Mus musculus GN=Aldh3b1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 398 bits (1023), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/454 (43%), Positives = 291/454 (64%), Gaps = 7/454 (1%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
+++LR F G+T+S +R +QL+ L L + + + +AL QDL K E+ + E+A+
Sbjct: 8 LQQLREAFKEGRTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFEAEVSEIAIS 67
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
+ + AL+ L+ WM EK ++ T SA I EPFG+VLII PWNYP L+L P+VG
Sbjct: 68 QAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIVPWNYPINLTLVPLVG 127
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGN +VLKPSE++ A+ +LA+++ Y+D S VV G ET LL+ K+D I +T
Sbjct: 128 AIAAGNCVVLKPSEISKATEKILAEVLPRYLDQSCFTVVLGGRQETGQLLEHKFDYIFFT 187
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
GN+ V +IVMAAAAKHLTP+ LELGGK+P D + ++ R+ ++ N GQ C++
Sbjct: 188 GNAYVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDPQIVANRVAWFRY-FNAGQTCVA 246
Query: 263 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+I+ +++ +L+ +L+N + FYG NP S +L RI+N HF RL LL G+
Sbjct: 247 PDYILCSQEMQERLVPALQNAITRFYGDNPQTSPNLGRIINQKHFKRLQGLLG----CGR 302
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
+ GG+ D+ + IAPT+L+DV +M EEIFGP+LP++TV ++++ + +N KPL
Sbjct: 303 VAIGGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVRSLDEAIEFMNRREKPL 362
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 442
A Y F+ ++ +Q + S+GG ND +H+ + SLPFGGV SGMG YHGKFSFD F
Sbjct: 363 ALYAFSKRSQVIKQVLARTSSGGFCGNDGFMHMTLSSLPFGGVGTSGMGRYHGKFSFDTF 422
Query: 443 SHKKAVLSR--GFIGDVPVRYPPYTKGKLRLLKV 474
S+++A L R G +RYPPY+ LR+L V
Sbjct: 423 SNQRACLLRSPGMEKINDLRYPPYSSRNLRVLLV 456
|
Oxidizes medium and long chain saturated and unsaturated aldehydes (By similarity). Metabolizes also benzaldehyde (By similarity). Low activity towards acetaldehyde and 3,4-dihydroxyphenylacetaldehyde (By similarity). May not metabolize short chain aldehydes (By similarity). May use both NADP(+) and NAD(+) as cofactors (By similarity). May have a protective role against the cytotoxicity induced by lipid peroxidation. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 493 | ||||||
| 224082306 | 488 | predicted protein [Populus trichocarpa] | 0.989 | 1.0 | 0.761 | 0.0 | |
| 217074984 | 488 | unknown [Medicago truncatula] | 0.983 | 0.993 | 0.773 | 0.0 | |
| 255558654 | 495 | Aldehyde dehydrogenase, putative [Ricinu | 0.995 | 0.991 | 0.760 | 0.0 | |
| 356503028 | 496 | PREDICTED: aldehyde dehydrogenase family | 0.975 | 0.969 | 0.779 | 0.0 | |
| 356552695 | 496 | PREDICTED: aldehyde dehydrogenase family | 0.981 | 0.975 | 0.774 | 0.0 | |
| 224066815 | 480 | predicted protein [Populus trichocarpa] | 0.971 | 0.997 | 0.753 | 0.0 | |
| 356552697 | 487 | PREDICTED: aldehyde dehydrogenase family | 0.977 | 0.989 | 0.765 | 0.0 | |
| 357463521 | 495 | Aldehyde dehydrogenase family 3 member H | 0.991 | 0.987 | 0.712 | 0.0 | |
| 442736187 | 492 | fatty aldehyde dehydrogenase [Simmondsia | 0.967 | 0.969 | 0.744 | 0.0 | |
| 449449751 | 484 | PREDICTED: aldehyde dehydrogenase family | 0.971 | 0.989 | 0.741 | 0.0 |
| >gi|224082306|ref|XP_002306641.1| predicted protein [Populus trichocarpa] gi|222856090|gb|EEE93637.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/491 (76%), Positives = 434/491 (88%), Gaps = 3/491 (0%)
Query: 1 MGSEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIV 60
M ++EE +N VFD EAA++ KELR FASGKT+SY WR+SQLKS++KM +E E DIV
Sbjct: 1 MATKEE---ENTVFDVEAANVLTKELRDVFASGKTRSYEWRISQLKSIVKMCDEHEEDIV 57
Query: 61 DALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPF 120
DALRQDL KP+LES +YE+ ++K S A+KELKHWM PEKAKTS+TTFPSSAEIV EP
Sbjct: 58 DALRQDLSKPQLESIVYELTMVKNSCTLAIKELKHWMMPEKAKTSLTTFPSSAEIVSEPL 117
Query: 121 GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRV 180
G VLIIS WNYPFLLS+DP++GAIAAGNA+VLKPSEVAPA+SSLLAKL+ EY+D SSI+V
Sbjct: 118 GAVLIISAWNYPFLLSMDPLIGAIAAGNAMVLKPSEVAPATSSLLAKLLPEYLDCSSIKV 177
Query: 181 VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240
VEGAV+ETSALL+QKWDKI YTGN RV RIVMAAAAKHLTPV+LELGGKSPVV DSGI++
Sbjct: 178 VEGAVSETSALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSGIDI 237
Query: 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSR 300
++A RR+I+GKWGCNNGQACISPD+IITTKD A KL++SLK ELE FYGKNPLESKDLSR
Sbjct: 238 QIATRRIIVGKWGCNNGQACISPDYIITTKDCAEKLVDSLKKELEAFYGKNPLESKDLSR 297
Query: 301 IVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 360
IVNSNHF+RL+KLLD+DKVSGKIV+GGERD+ LRIAPT+LL VP++SLIM EEIFGPLL
Sbjct: 298 IVNSNHFSRLTKLLDEDKVSGKIVYGGERDEANLRIAPTILLGVPQNSLIMKEEIFGPLL 357
Query: 361 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 420
PILTV KIEDSFDII SGTKPLAAYLFTNNKKLK+QF+ +VSAGG+VINDT +HLAVHS+
Sbjct: 358 PILTVSKIEDSFDIIKSGTKPLAAYLFTNNKKLKEQFLMSVSAGGVVINDTTLHLAVHSV 417
Query: 421 PFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSL 480
PFGGV ESGMG+YHGKFSFD F+HKKAV+ R F+GD VRYPPYT GKLRL+K LI+G++
Sbjct: 418 PFGGVGESGMGSYHGKFSFDAFTHKKAVVYRSFVGDASVRYPPYTLGKLRLMKALITGNV 477
Query: 481 LGIIRALLGWS 491
I+R LLG S
Sbjct: 478 WTILRTLLGMS 488
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|217074984|gb|ACJ85852.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/485 (77%), Positives = 423/485 (87%)
Query: 7 TKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQD 66
+K +VFD + AS VK+LR TF SGKT+SY W+VSQLK+L+++ + E +IV+AL D
Sbjct: 4 SKLNKKVFDLKEASTTVKDLRITFDSGKTRSYEWKVSQLKALLELTEKHEKEIVEALYSD 63
Query: 67 LDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLII 126
L K E ES I EV +LK S K+ALKELKHWM PEK KTSITTFPSSAEIV EPFGVVL+I
Sbjct: 64 LSKSEAESFIQEVGMLKNSCKTALKELKHWMAPEKVKTSITTFPSSAEIVSEPFGVVLVI 123
Query: 127 SPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVA 186
S WNYPFLLSLDPV+GAIAAGNA+VLKPSE+APA+SSLLAKL+GEYMD SSIRVVEGAV
Sbjct: 124 SAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLGEYMDNSSIRVVEGAVD 183
Query: 187 ETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRR 246
ETSALL QKWDKI YTGN RVARIVMAAAAKHLTPV+LELGGKSPVV DS INL+VA RR
Sbjct: 184 ETSALLQQKWDKIFYTGNGRVARIVMAAAAKHLTPVVLELGGKSPVVVDSNINLQVAARR 243
Query: 247 MIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNH 306
+I GKWGCNNGQACISPD+IITTKDYAPKL+++LK ELE FYGKNPLESKDLSRIVNSNH
Sbjct: 244 IIAGKWGCNNGQACISPDYIITTKDYAPKLVDALKTELEQFYGKNPLESKDLSRIVNSNH 303
Query: 307 FARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD 366
F RL +LLDDDKVSGKIVHGGE+DK+KLRI+PT+LLDVPRDSLIMSEEIFGPLLPI+TVD
Sbjct: 304 FDRLIRLLDDDKVSGKIVHGGEKDKSKLRISPTVLLDVPRDSLIMSEEIFGPLLPIITVD 363
Query: 367 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQ 426
K+++SFD+INS KPLAAY+FTNN KLK+QFV+TVSAGGLVI+DT +HLAVH+LPFGGV
Sbjct: 364 KLDESFDVINSAPKPLAAYIFTNNNKLKEQFVKTVSAGGLVIDDTTIHLAVHTLPFGGVG 423
Query: 427 ESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRA 486
ESG+GAYHGKFSFD FSHKKAVL R F GD +RYPPYT K RL+K L+ G L IIRA
Sbjct: 424 ESGVGAYHGKFSFDAFSHKKAVLYRSFFGDASIRYPPYTSTKTRLMKALMGGGFLAIIRA 483
Query: 487 LLGWS 491
L G S
Sbjct: 484 LFGRS 488
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255558654|ref|XP_002520352.1| Aldehyde dehydrogenase, putative [Ricinus communis] gi|223540571|gb|EEF42138.1| Aldehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/492 (76%), Positives = 423/492 (85%), Gaps = 1/492 (0%)
Query: 2 GSEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVD 61
G E +K +FD E S +KELRG+F SGKT+SY WRV+Q+KSL+K+ + E +IVD
Sbjct: 3 GGNNEEEKAVMLFDVEEGSSMMKELRGSFGSGKTRSYEWRVTQIKSLVKLCDFHEKEIVD 62
Query: 62 ALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFG 121
ALR DL KPELES++YE+ +LK S + ALKELKHWM PEKAKTSI TFPS+AEIVPEPFG
Sbjct: 63 ALRLDLSKPELESTVYEIGMLKNSCRVALKELKHWMRPEKAKTSIATFPSAAEIVPEPFG 122
Query: 122 VVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVV 181
VVLIIS WNYPFLLSLDP++GAIAAGNA+VLKPSE+APA+SSLLAKLV Y+D S IRV+
Sbjct: 123 VVLIISAWNYPFLLSLDPLIGAIAAGNAVVLKPSEIAPATSSLLAKLVTAYLDSSCIRVI 182
Query: 182 EGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL- 240
EGAVAETSALL+QKWDKI YTGN RV RIVMAAAAKHLTPV+LELGGKSPVV DSGINL
Sbjct: 183 EGAVAETSALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVIDSGINLL 242
Query: 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSR 300
A R+I GKWGCNNGQACISPD+IITTKDYAPKL+++LK ELE FYG+NPL SKDLSR
Sbjct: 243 ASALLRIIAGKWGCNNGQACISPDYIITTKDYAPKLVDALKQELERFYGENPLVSKDLSR 302
Query: 301 IVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 360
IVNSNHF+RL KLLD+DKVSGKIVHGGERD+ L+IAPT+L+DVP+DSLIM+EEIFGPLL
Sbjct: 303 IVNSNHFSRLIKLLDEDKVSGKIVHGGERDEANLKIAPTILMDVPQDSLIMNEEIFGPLL 362
Query: 361 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 420
PI+ V+KIE+SFD+INS TKPLAAYLFTN KKLKQQFV VSAGGLV+NDT VHLAVH+L
Sbjct: 363 PIVMVNKIEESFDLINSRTKPLAAYLFTNKKKLKQQFVTCVSAGGLVVNDTTVHLAVHTL 422
Query: 421 PFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSL 480
PFGGV ESG GAYHGKFSFD FSHKKAVL R F GD +RYPPYTKGKLRL+K LI G +
Sbjct: 423 PFGGVGESGTGAYHGKFSFDAFSHKKAVLYRSFTGDAAIRYPPYTKGKLRLMKALIGGGI 482
Query: 481 LGIIRALLGWSK 492
II AL GW K
Sbjct: 483 WSIISALFGWGK 494
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356503028|ref|XP_003520314.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/481 (77%), Positives = 424/481 (88%)
Query: 10 KNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDK 69
KN FDAEAAS V ELR FAS KT+SY WR+SQL +L K++ E +IVDALR DL K
Sbjct: 16 KNTAFDAEAASRLVNELRRNFASNKTRSYEWRLSQLNALEKLVVVHEQEIVDALRNDLGK 75
Query: 70 PELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPW 129
P LE+ YE+A+LK S + ALKELKHWMTPEK KTSI TFPSSAEIV EP GVVL+IS W
Sbjct: 76 PPLETVAYEIAMLKNSCRIALKELKHWMTPEKVKTSIATFPSSAEIVSEPLGVVLVISAW 135
Query: 130 NYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETS 189
NYPFLLSLDPVVGAIAAGNA+VLKPSE+APA+SSLLAKL+G+Y+D S IRVVEGAV ETS
Sbjct: 136 NYPFLLSLDPVVGAIAAGNAVVLKPSEIAPATSSLLAKLIGDYLDNSCIRVVEGAVDETS 195
Query: 190 ALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIM 249
ALL QKWDKI YTGN RVARIVMAAA+KHLTPV+LELGGKSPVV DS INLKVA RR+I
Sbjct: 196 ALLQQKWDKIFYTGNGRVARIVMAAASKHLTPVVLELGGKSPVVVDSNINLKVATRRIIA 255
Query: 250 GKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFAR 309
GKWG NNGQACISPD+IITTKDYAPKL+++LK ELE FYGKNPLESKDLSR+VNSNHF R
Sbjct: 256 GKWGSNNGQACISPDYIITTKDYAPKLVDALKTELEKFYGKNPLESKDLSRVVNSNHFNR 315
Query: 310 LSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE 369
L+KLLDDDKVSGKIV+GG++D+NKL+I+PT+LLDVPRDSLIM+EEIFGPLLPILTVDK+E
Sbjct: 316 LTKLLDDDKVSGKIVYGGQKDENKLKISPTVLLDVPRDSLIMNEEIFGPLLPILTVDKLE 375
Query: 370 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESG 429
+SFD+INSG KPLAAY+FTNNKKLK+QFV T+SAGGLV+NDT +HLAVH+LPFGGV ESG
Sbjct: 376 ESFDVINSGPKPLAAYIFTNNKKLKEQFVMTISAGGLVVNDTTLHLAVHTLPFGGVGESG 435
Query: 430 MGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLG 489
+GAYHGKFSF+ FSHKKAVL R FIGD PVRYPPYT K+RLLK +I G + GI+RAL G
Sbjct: 436 VGAYHGKFSFEAFSHKKAVLYRKFIGDAPVRYPPYTNTKMRLLKAIIGGGIHGIVRALFG 495
Query: 490 W 490
W
Sbjct: 496 W 496
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356552695|ref|XP_003544698.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/484 (77%), Positives = 426/484 (88%)
Query: 7 TKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQD 66
T K FDA AAS V ELRG FASGKT+SY WR+ QL ++ K++ + E +IVDALR D
Sbjct: 13 TSSKKSAFDALAASRLVTELRGNFASGKTRSYEWRLLQLNAIAKLVVDHEQEIVDALRND 72
Query: 67 LDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLII 126
L KP LE+ YE+A+LK S + ALKELKHWMTPEK KTSI TFPSSAEIV EP GVVL+I
Sbjct: 73 LGKPPLETVAYEIAMLKNSCRIALKELKHWMTPEKVKTSIATFPSSAEIVSEPLGVVLVI 132
Query: 127 SPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVA 186
S WNYPFLLSLDPV+GAIAAGNA+VLKPSE+APA+SSLLAKL+G+Y+D S I+VVEGAV
Sbjct: 133 SAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLGDYLDNSCIKVVEGAVD 192
Query: 187 ETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRR 246
ETSALL QKWDKI YTGN RVARIVMAAA+KHLTPV+LELGGKSPVV DS INLKVA RR
Sbjct: 193 ETSALLQQKWDKIFYTGNGRVARIVMAAASKHLTPVVLELGGKSPVVVDSNINLKVATRR 252
Query: 247 MIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNH 306
+I GKWG NNGQACISPD+IITTKDYAPKL+++LK ELE FYGKNPLESKDLSRIVNSNH
Sbjct: 253 IIAGKWGSNNGQACISPDYIITTKDYAPKLVDALKTELEKFYGKNPLESKDLSRIVNSNH 312
Query: 307 FARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD 366
F RL+KLLDDDKVSGKIV+GGE+D++KL+I+PT+LLDVPRDSLIM+EEIFGPLLPILTVD
Sbjct: 313 FNRLTKLLDDDKVSGKIVYGGEKDESKLKISPTVLLDVPRDSLIMNEEIFGPLLPILTVD 372
Query: 367 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQ 426
KIE+SFD+INSG+KPLAAY+FTN KKLK+QFV T+SAGGLV+NDT +HLAVH+LPFGGV
Sbjct: 373 KIEESFDVINSGSKPLAAYIFTNTKKLKEQFVMTISAGGLVVNDTTLHLAVHTLPFGGVG 432
Query: 427 ESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRA 486
ESG+GAYHGKF+F+ FSHKKAVL R FIGD PVRYPPYT K+RLLK LI G +LGIIRA
Sbjct: 433 ESGVGAYHGKFTFEAFSHKKAVLYRRFIGDAPVRYPPYTNTKMRLLKALIGGGILGIIRA 492
Query: 487 LLGW 490
L GW
Sbjct: 493 LFGW 496
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224066815|ref|XP_002302229.1| predicted protein [Populus trichocarpa] gi|222843955|gb|EEE81502.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/479 (75%), Positives = 418/479 (87%)
Query: 13 VFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPEL 72
VFD EAA++ KELR FASGKT+SY WR+SQLKS++KM +E E DIVDAL QDL KP+L
Sbjct: 2 VFDVEAANMLTKELRDVFASGKTRSYEWRISQLKSMIKMCDEHEEDIVDALHQDLSKPKL 61
Query: 73 ESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYP 132
ES +YE+ +LK S A+KELK WM PEKAKTS+ TFPSSAEIVPEP GVVLIIS WNYP
Sbjct: 62 ESIVYEITMLKNSCTLAIKELKQWMMPEKAKTSLLTFPSSAEIVPEPLGVVLIISAWNYP 121
Query: 133 FLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALL 192
FLLSLDP+VGAIAAGNA+VLKPSE +PA+SSLLAKL+ EY+D+SSI+VVEGAV+ETSALL
Sbjct: 122 FLLSLDPLVGAIAAGNAMVLKPSEFSPATSSLLAKLLPEYLDISSIKVVEGAVSETSALL 181
Query: 193 DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKW 252
+QKWDKI YTGN V RIVMAAAAKHLTPV+LELGGKSPVV DS I+L++A RR+I GKW
Sbjct: 182 EQKWDKIFYTGNGIVGRIVMAAAAKHLTPVVLELGGKSPVVVDSAIDLQIATRRLIAGKW 241
Query: 253 GCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSK 312
GCNNGQAC+SPD+IITTKD A KL++SLK ELE FYGKNPLESKDLSRIVNS HF+RL+K
Sbjct: 242 GCNNGQACVSPDYIITTKDCADKLVDSLKKELETFYGKNPLESKDLSRIVNSKHFSRLTK 301
Query: 313 LLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF 372
LLD+DKVS KIV+GGERD+ L+I+PT+L+DVP DSLIM EEIFGPLLPIL V KIEDSF
Sbjct: 302 LLDEDKVSRKIVYGGERDEANLKISPTILVDVPCDSLIMKEEIFGPLLPILIVSKIEDSF 361
Query: 373 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA 432
D+INSGTKPLAAYLFTNNKKLK+QFV +VSAGG+VIND A+HLA+H+LPFGGV ESG G+
Sbjct: 362 DMINSGTKPLAAYLFTNNKKLKEQFVMSVSAGGVVINDIAMHLAIHTLPFGGVGESGTGS 421
Query: 433 YHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWS 491
YHGKFSFD FSHKKAVL R F+GD +RYPPYT+GKLRL+K ++ + I+RAL G S
Sbjct: 422 YHGKFSFDAFSHKKAVLYRSFMGDAALRYPPYTRGKLRLMKAFMTSNFWTILRALFGRS 480
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356552697|ref|XP_003544699.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/482 (76%), Positives = 422/482 (87%)
Query: 9 KKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLD 68
K +FD+E A + VKELR TF GKT+SY WR+SQLK+++K+ E E I AL DL
Sbjct: 6 KSKALFDSEEALMMVKELRVTFDCGKTRSYEWRISQLKAIIKLTEENEQQIYQALHSDLS 65
Query: 69 KPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISP 128
K E E+ + E+A+LK S + ALKELKHWMTPEK KTSI TFPSSAEIV EP GVVL+IS
Sbjct: 66 KCETEAFVQEIAMLKNSCRIALKELKHWMTPEKVKTSIATFPSSAEIVSEPLGVVLVISA 125
Query: 129 WNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAET 188
WNYPFLLSLDPV+GAIAAGNA+VLKPSE+APA+SSLLAKL+G+Y+D S I+VVEGAV ET
Sbjct: 126 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLGDYLDNSCIKVVEGAVDET 185
Query: 189 SALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMI 248
SALL QKWDKI YTGN RVARIVMAAA+KHLTPV+LELGGKSPVV DS INLKVA RR+I
Sbjct: 186 SALLQQKWDKIFYTGNGRVARIVMAAASKHLTPVVLELGGKSPVVVDSNINLKVATRRII 245
Query: 249 MGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFA 308
GKWG NNGQACISPD+IITTKDYAPKL+++LK ELE FYGKNPLESKDLSRIVNSNHF
Sbjct: 246 AGKWGSNNGQACISPDYIITTKDYAPKLVDALKTELEKFYGKNPLESKDLSRIVNSNHFN 305
Query: 309 RLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 368
RL+KLLDDDKVSGKIV+GGE+D++KL+I+PT+LLDVPRDSLIM+EEIFGPLLPILTVDKI
Sbjct: 306 RLTKLLDDDKVSGKIVYGGEKDESKLKISPTVLLDVPRDSLIMNEEIFGPLLPILTVDKI 365
Query: 369 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQES 428
E+SFD+INSG+KPLAAY+FTN KKLK+QFV T+SAGGLV+NDT +HLAVH+LPFGGV ES
Sbjct: 366 EESFDVINSGSKPLAAYIFTNTKKLKEQFVMTISAGGLVVNDTTLHLAVHTLPFGGVGES 425
Query: 429 GMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALL 488
G+GAYHGKF+F+ FSHKKAVL R FIGD PVRYPPYT K+RLLK LI G +LGIIRAL
Sbjct: 426 GVGAYHGKFTFEAFSHKKAVLYRRFIGDAPVRYPPYTNTKMRLLKALIGGGILGIIRALF 485
Query: 489 GW 490
GW
Sbjct: 486 GW 487
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357463521|ref|XP_003602042.1| Aldehyde dehydrogenase family 3 member H1 [Medicago truncatula] gi|355491090|gb|AES72293.1| Aldehyde dehydrogenase family 3 member H1 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/494 (71%), Positives = 426/494 (86%), Gaps = 5/494 (1%)
Query: 3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDA 62
S E+ +K +FD EAAS VKELR +F+SGKT+SY WR+SQ+K+L+KM++E++ I+DA
Sbjct: 2 SGEDHSQKKVMFDGEAASSLVKELRVSFSSGKTRSYEWRISQVKALLKMVDEQQDQIIDA 61
Query: 63 LRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGV 122
LR DL KP LE+ +YE+ + K S + LKELK WM PEKAKTS+TTFPSSAEIVPEP GV
Sbjct: 62 LRSDLAKPPLETVVYEIGMFKNSCEVTLKELKQWMAPEKAKTSVTTFPSSAEIVPEPLGV 121
Query: 123 VLIISPWNYPF-----LLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
VL+IS WNYPF +LSLDPVVGAIAAGNA+VLKPSE+APASSSLLA L+G YMD SS
Sbjct: 122 VLVISAWNYPFRKSTFVLSLDPVVGAIAAGNAVVLKPSEIAPASSSLLANLLGRYMDNSS 181
Query: 178 IRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237
+RVVEGAV ET+ALL QKWDKI YTGN +V RIVMAAAAKHLTPV+LELGGKSP V DS
Sbjct: 182 VRVVEGAVDETTALLQQKWDKIFYTGNGKVGRIVMAAAAKHLTPVVLELGGKSPTVVDSN 241
Query: 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKD 297
+NL+V RR+I GKW CNNGQACISPD++ITTKD+APKL+++LK ELE+F+GKNP+ES D
Sbjct: 242 VNLEVTARRIISGKWCCNNGQACISPDYVITTKDFAPKLVDALKKELESFFGKNPIESND 301
Query: 298 LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFG 357
LSRIV+SNHFARL K+LDDDKVSGKIV+GGE+D++KLRIAPT++LD P+DSLIMSEEIFG
Sbjct: 302 LSRIVSSNHFARLIKMLDDDKVSGKIVYGGEKDESKLRIAPTIVLDAPQDSLIMSEEIFG 361
Query: 358 PLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAV 417
PLLPI+TV+K+E+SFD+IN+GTKPLAAYLFTN+ K K+QFV+ VSAGGL+INDT +HL V
Sbjct: 362 PLLPIITVNKLEESFDVINAGTKPLAAYLFTNDNKFKEQFVKNVSAGGLLINDTVLHLVV 421
Query: 418 HSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLIS 477
H+LPFGGV +SGMGAYHGKFSFD F+H+KAVL RGF GD +RYPPYT K +L+K L++
Sbjct: 422 HTLPFGGVGDSGMGAYHGKFSFDAFTHRKAVLYRGFTGDASIRYPPYTDTKQKLMKALVA 481
Query: 478 GSLLGIIRALLGWS 491
G + G++RAL GWS
Sbjct: 482 GDVTGVVRALFGWS 495
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|442736187|gb|AGC65583.1| fatty aldehyde dehydrogenase [Simmondsia chinensis] | Back alignment and taxonomy information |
|---|
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/477 (74%), Positives = 416/477 (87%)
Query: 14 FDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELE 73
FD EAA+ V ELR TFA+GKT+SY WRV+QL ++KM+ E +IV+ALR DL+KPE E
Sbjct: 6 FDTEAAASTVTELRRTFAAGKTRSYEWRVAQLNGMIKMVENHEQEIVEALRLDLNKPEFE 65
Query: 74 SSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF 133
S +YE+ LLK+S K ALKELK WM PEK KTS+TTFPSSAEIVPEP G+VL+IS WNYP
Sbjct: 66 SILYEIMLLKSSCKVALKELKQWMMPEKVKTSLTTFPSSAEIVPEPLGIVLVISAWNYPL 125
Query: 134 LLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLD 193
LLSLDP+VGAIAAGN +VLKPSE+APA+SS LAK V +YMD S+I+VVEG++ ETSALL+
Sbjct: 126 LLSLDPIVGAIAAGNVVVLKPSEIAPATSSFLAKFVEKYMDNSAIKVVEGSIPETSALLE 185
Query: 194 QKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWG 253
QKW+KI YTGN RV RIVMAAAAKHLTPV+LELGGKSP + DS IN VA RR+I GKWG
Sbjct: 186 QKWEKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPAIVDSNINTTVAARRIIAGKWG 245
Query: 254 CNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKL 313
CNNGQACISPD+IITTKD+APKL+++LK ELE YG PLESKDLSRIVNSNHF RL++L
Sbjct: 246 CNNGQACISPDYIITTKDFAPKLIDTLKRELERCYGTEPLESKDLSRIVNSNHFDRLTRL 305
Query: 314 LDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFD 373
LD+DKVSG+IV GG+RD++KLRIAPT+L VP+DSLIMSEEIFGPLLP++TVD++E+SFD
Sbjct: 306 LDEDKVSGRIVCGGQRDRDKLRIAPTVLQGVPQDSLIMSEEIFGPLLPVITVDRLEESFD 365
Query: 374 IINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAY 433
+INS TKPLAAYLFTN KKLK +FV VSAGGLVIND+A+HLAVH+LPFGGV ESGMG+Y
Sbjct: 366 LINSRTKPLAAYLFTNRKKLKHEFVSNVSAGGLVINDSALHLAVHTLPFGGVAESGMGSY 425
Query: 434 HGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGW 490
HGKFSFDVFSHKKAVL R F+GD RYPPYT+GKLRLLK L+SGS+LGII+AL+GW
Sbjct: 426 HGKFSFDVFSHKKAVLYRSFMGDAAARYPPYTQGKLRLLKALLSGSILGIIKALMGW 482
|
Source: Simmondsia chinensis Species: Simmondsia chinensis Genus: Simmondsia Family: Simmondsiaceae Order: Caryophyllales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449449751|ref|XP_004142628.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like [Cucumis sativus] gi|449500684|ref|XP_004161167.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/479 (74%), Positives = 418/479 (87%)
Query: 13 VFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPEL 72
VFD EAA V ELR ++ SGKT+SY WR +QLK+L+K++ E E +V + DL KPE
Sbjct: 6 VFDGEAAERVVTELRESYNSGKTRSYEWRENQLKNLLKLVCENEEVMVQTVNSDLHKPEF 65
Query: 73 ESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYP 132
E+ +E+ALLK S K A+KEL+ WM PEK K+SIT FPSSA IVPEPFGVVLIIS WNYP
Sbjct: 66 EAFAHEIALLKGSCKLAIKELRRWMAPEKVKSSITVFPSSAAIVPEPFGVVLIISAWNYP 125
Query: 133 FLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALL 192
FLLSLDPVVGAIAAGNA+VLKPSE++P +SSL+AKL+ +Y+D S+++VVEGAV ET ALL
Sbjct: 126 FLLSLDPVVGAIAAGNAVVLKPSEISPRTSSLMAKLLEKYLDTSAVKVVEGAVPETQALL 185
Query: 193 DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKW 252
+QKWDKI YTGN +V RIVMAAAAKHLTPV+LELGGKSPVV DS INL+VA RR+I GKW
Sbjct: 186 EQKWDKIFYTGNGKVGRIVMAAAAKHLTPVVLELGGKSPVVVDSKINLQVASRRIIAGKW 245
Query: 253 GCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSK 312
GCNNGQACI+PD++ITTK++APKL+E +K ELE FYGKNPLE+KDLSRIVN+NHF RL++
Sbjct: 246 GCNNGQACIAPDYVITTKEFAPKLVECMKQELEKFYGKNPLETKDLSRIVNANHFDRLTR 305
Query: 313 LLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF 372
LLDDDK+SGKIVHGGE+DK+KL+IAPTLLLDVPRDSLIM+EEIFGPLLPILTVDK+EDSF
Sbjct: 306 LLDDDKISGKIVHGGEKDKSKLQIAPTLLLDVPRDSLIMTEEIFGPLLPILTVDKVEDSF 365
Query: 373 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA 432
DI+NSGTKPLAAYLFTNNKKLK++FV +SAGG+ IN+TA+HL + +LPFGGV ESGMGA
Sbjct: 366 DIVNSGTKPLAAYLFTNNKKLKERFVACISAGGVAINETALHLTISTLPFGGVGESGMGA 425
Query: 433 YHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWS 491
YHGKFSFD FSHKKAVL R F GD P+RYPPYTKGKLR+LK L+ G +L +IRALLGWS
Sbjct: 426 YHGKFSFDAFSHKKAVLYRSFAGDAPMRYPPYTKGKLRILKALLGGGILALIRALLGWS 484
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 493 | ||||||
| TAIR|locus:2205851 | 484 | ALDH3H1 "AT1G44170" [Arabidops | 0.969 | 0.987 | 0.694 | 7.8e-181 | |
| TAIR|locus:2116134 | 550 | ALDH3I1 "AT4G34240" [Arabidops | 0.983 | 0.881 | 0.614 | 8.4e-161 | |
| TAIR|locus:2122224 | 484 | ALDH3F1 "AT4G36250" [Arabidops | 0.945 | 0.962 | 0.447 | 5.3e-111 | |
| UNIPROTKB|E2RPP8 | 599 | ALDH3A2 "Uncharacterized prote | 0.910 | 0.749 | 0.442 | 8.3e-104 | |
| UNIPROTKB|D4A137 | 507 | Aldh3a2 "Aldehyde dehydrogenas | 0.910 | 0.885 | 0.453 | 2e-102 | |
| RGD|61866 | 484 | Aldh3a2 "aldehyde dehydrogenas | 0.910 | 0.927 | 0.453 | 2.6e-102 | |
| UNIPROTKB|P30839 | 484 | Aldh3a2 "Fatty aldehyde dehydr | 0.910 | 0.927 | 0.453 | 2.6e-102 | |
| UNIPROTKB|F1NH33 | 490 | ALDH3A2 "Aldehyde dehydrogenas | 0.937 | 0.942 | 0.439 | 2.1e-100 | |
| MGI|MGI:1353452 | 484 | Aldh3a2 "aldehyde dehydrogenas | 0.910 | 0.927 | 0.442 | 5.6e-100 | |
| ZFIN|ZDB-GENE-040912-103 | 490 | aldh3a2b "aldehyde dehydrogena | 0.896 | 0.902 | 0.445 | 5.6e-100 |
| TAIR|locus:2205851 ALDH3H1 "AT1G44170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1755 (622.8 bits), Expect = 7.8e-181, P = 7.8e-181
Identities = 332/478 (69%), Positives = 401/478 (83%)
Query: 12 EVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE 71
+VF + AS V ELR +F G T+ Y WRV+QLK LM + + EP+IV ALR DL KPE
Sbjct: 5 KVFGSAEASNLVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPE 64
Query: 72 LESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNY 131
LESS+YEV+LL+ SIK ALK+LK+WM PEKAKTS+TTFP+SAEIV EP GVVL+IS WNY
Sbjct: 65 LESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNY 124
Query: 132 PFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSAL 191
PFLLS+DPV+GAI+AGNA+VLKPSE+APASS+LL KL+ +Y+D S++RVVEGAV ETSAL
Sbjct: 125 PFLLSIDPVIGAISAGNAVVLKPSELAPASSALLTKLLEQYLDPSAVRVVEGAVTETSAL 184
Query: 192 LDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK 251
L+QKWDKI YTG+S++ R++MAAAAKHLTPV+LELGGKSPVV DS +LKV RR+I+GK
Sbjct: 185 LEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIVGK 244
Query: 252 WGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLS 311
WGCNNGQAC+SPD+I+TTK+YAP FYGKNP+ESKD+SRIVNSNHF RLS
Sbjct: 245 WGCNNGQACVSPDYILTTKEYAPKLIDAMKLELEKFYGKNPIESKDMSRIVNSNHFDRLS 304
Query: 312 KLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 371
KLLD+ +VS KIV+GGE+D+ L+IAPT+LLDVP DSLIMSEEIFGPLLPILT++ +E+S
Sbjct: 305 KLLDEKEVSDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEES 364
Query: 372 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 431
FD+I S KPLAAYLFT+NKKLK++F TVSAGG+V+ND AVHLA+H+LPFGGV ESGMG
Sbjct: 365 FDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMG 424
Query: 432 AYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLG 489
AYHGKFSFD FSHKKAVL R GD VRYPPY++GKLRLLK L+ ++ + + LLG
Sbjct: 425 AYHGKFSFDAFSHKKAVLYRSLFGDSAVRYPPYSRGKLRLLKALVDSNIFDLFKVLLG 482
|
|
| TAIR|locus:2116134 ALDH3I1 "AT4G34240" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1566 (556.3 bits), Expect = 8.4e-161, P = 8.4e-161
Identities = 298/485 (61%), Positives = 378/485 (77%)
Query: 8 KKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDL 67
K++ F + A+L V ELR F SG+TKSY WR+SQL+++ +M++E+E I +AL QDL
Sbjct: 64 KEQASDFSGKEAALLVDELRSNFNSGRTKSYEWRISQLQNIARMIDEKEKCITEALYQDL 123
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KPELE+ + E++ K+S A+KELK+WM PE KTS+TTFPSSA+IV EP GVVL+IS
Sbjct: 124 SKPELEAFLAEISNTKSSCMLAIKELKNWMAPETVKTSVTTFPSSAQIVSEPLGVVLVIS 183
Query: 128 PWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAE 187
WN+PFLLS++PV+GAIAAGNA+VLKPSE+APA+SSLLAKL EY+D ++IRV+EG V E
Sbjct: 184 AWNFPFLLSVEPVIGAIAAGNAVVLKPSEIAPAASSLLAKLFSEYLDNTTIRVIEGGVPE 243
Query: 188 TSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRM 247
T+ALLDQKWDKI +TG +RVARI+MAAAA++LTPV+LELGGK P + DS +NL+VA RR+
Sbjct: 244 TTALLDQKWDKIFFTGGARVARIIMAAAARNLTPVVLELGGKCPALVDSDVNLQVAARRI 303
Query: 248 IMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHF 307
I GKW CN+GQACI D++ITTKD+A F+G+N LESKDLSRIVNS HF
Sbjct: 304 IAGKWACNSGQACIGVDYVITTKDFASKLIDALKTELETFFGQNALESKDLSRIVNSFHF 363
Query: 308 ARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK 367
RL +L ++ V+ KIVHGG ++KL+I+PT+LLDVP S +M EEIFGPLLPI+TV K
Sbjct: 364 KRLESMLKENGVANKIVHGGRITEDKLKISPTILLDVPEASSMMQEEIFGPLLPIITVQK 423
Query: 368 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQE 427
IED F +I S KPLAAYLFTNNK+L++QFV+ VSAGG+ INDT +H+ V LPFGGV E
Sbjct: 424 IEDGFQVIRSKPKPLAAYLFTNNKELEKQFVQDVSAGGITINDTVLHVTVKDLPFGGVGE 483
Query: 428 SGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRAL 487
SG+GAYHGKFS++ FSHKK VL R F GD +RYPPYT K +LK L+S ++ I A
Sbjct: 484 SGIGAYHGKFSYETFSHKKGVLYRSFSGDADLRYPPYTPKKKMVLKALLSSNIFAAILAF 543
Query: 488 LGWSK 492
G+SK
Sbjct: 544 FGFSK 548
|
|
| TAIR|locus:2122224 ALDH3F1 "AT4G36250" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1096 (390.9 bits), Expect = 5.3e-111, P = 5.3e-111
Identities = 211/471 (44%), Positives = 309/471 (65%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
++E+R TFASG+T+S WR +Q+ ++ +M+ + E I +AL QDL K E+ E+ ++
Sbjct: 12 LREMRETFASGRTRSLKWRKAQIGAIYEMVKDNEDKICNALFQDLGKHSTEAFRDELGVV 71
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
+ A+ L W P+ +K + +P+ +++ EP+G VL++S WN+P LSLDP++G
Sbjct: 72 LRTATVAINCLDKWAVPKHSKLPLLFYPAKGKVISEPYGTVLVLSSWNFPISLSLDPLIG 131
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGN ++LK SE++P +S+ LAK + Y+D +I+V+EG + LL +WDKI +T
Sbjct: 132 AIAAGNTVLLKSSELSPNASAFLAKTIPAYLDTKAIKVIEGGPDVATILLQHQWDKIFFT 191
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI---NLKVACRRMIMGKWGCNNGQA 259
G+ ++ RI+MAAAA+HLTPV LELGGK P + D N+K +R+ GKWG NGQA
Sbjct: 192 GSPKIGRIIMAAAAQHLTPVTLELGGKCPTIVDHHTISKNIKSVVKRIAGGKWGSCNGQA 251
Query: 260 CISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV 319
CIS D+++ K +AP F+G+NP ES LSRI N +H RLS+LL D +V
Sbjct: 252 CISVDYVLIEKSFAPTLIDMLKPTIKSFFGENPKESGCLSRIANKHHVQRLSRLLSDPRV 311
Query: 320 SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 379
IV+GG D++KL + PT+LLD P DS IM+EEIFGP+LPI+TV I++S IIN+
Sbjct: 312 QASIVYGGSIDEDKLYVEPTILLDPPLDSEIMNEEIFGPILPIITVRDIQESIGIINTKP 371
Query: 380 KPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF 439
KPLA Y FTN++ LK + + S+G + ND + +LPFGGV ESG+G YHGK+SF
Sbjct: 372 KPLAIYAFTNDENLKTRILSETSSGSVTFNDVMIQYMCDALPFGGVGESGIGRYHGKYSF 431
Query: 440 DVFSHKKAVLSRGFIG-DVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLG 489
D FSH+KA++ G +G D+ RYPP+ KL +++ + +I +LG
Sbjct: 432 DCFSHEKAIME-GSLGMDLEARYPPWNNFKLTFIRLAFREAYFKLILLMLG 481
|
|
| UNIPROTKB|E2RPP8 ALDH3A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1007 (359.5 bits), Expect = 8.3e-104, Sum P(2) = 8.3e-104
Identities = 202/456 (44%), Positives = 288/456 (63%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
++ +R FASG+++ +R+ QL++L +M+ ERE DI++A+ DL K EL + EV +
Sbjct: 98 IQRVRAAFASGRSRPVRFRLQQLEALRRMVQEREKDILEAIAGDLCKSELNAYSQEVITV 157
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
+ L+ L W+ + AK ++ T A + PEP GVVLII WNYPF+L++ P++G
Sbjct: 158 LGELDLVLENLPEWVAAKPAKKNLLTMLDEAYVQPEPLGVVLIIGAWNYPFVLTIQPLIG 217
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGNA+++KPSE++ ++ +LA+L+ Y+D V+ G V ET+ LL Q++D I YT
Sbjct: 218 AIAAGNAVIIKPSELSEKTAKILAELLPRYLDQDLYVVINGGVEETTELLKQRFDHILYT 277
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
GN+ V +IVM AAAKHLTPV LELGGKSP D +L +ACRR+ GK+ N GQ CI+
Sbjct: 278 GNTAVGKIVMEAAAKHLTPVTLELGGKSPCYVDKDCDLDIACRRITWGKY-MNCGQTCIA 336
Query: 263 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+++ FYG+N ES D RI+N HF R+ LL+ K++
Sbjct: 337 PDYVLCEPSLQNQIVQKIKETVKEFYGENIKESPDYERIINLRHFKRILSLLEGQKIA-- 394
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
GGE D+ IAPT+L DV +S +M EEIFGP+LPI+ V +++ INS KPL
Sbjct: 395 --FGGETDEATRYIAPTILSDVDPESRVMQEEIFGPILPIVPVKNADEAIKFINSREKPL 452
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 442
A Y+F++N KL +Q + S+GG+ ND +H + SLPFGGV SGMGAYHGK+SFD F
Sbjct: 453 AFYIFSHNDKLVRQMINGTSSGGVTANDVIMHFTLSSLPFGGVGSSGMGAYHGKYSFDTF 512
Query: 443 SHKKAVLSRGFI--GDVPVRYPPYTKGKLRLLKVLI 476
SH++ L + G +RYPP ++ K+ K I
Sbjct: 513 SHQRPCLLKSLKREGANKLRYPPNSQSKVDWAKFFI 548
|
|
| UNIPROTKB|D4A137 Aldh3a2 "Aldehyde dehydrogenase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1015 (362.4 bits), Expect = 2.0e-102, P = 2.0e-102
Identities = 207/456 (45%), Positives = 290/456 (63%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
V+ LR TF SG+++ +R+ QL++L +M+ ERE DI+ A+ DL K EL + +EV +
Sbjct: 5 VQRLRQTFRSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLSKSELNAYSHEVITI 64
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
I L L + AK ++ T A + PEP GVVLII WNYPF+L+L P+VG
Sbjct: 65 LGEIDFMLGNLPELASARPAKKNLLTMMDEAYVQPEPLGVVLIIGAWNYPFVLTLQPLVG 124
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGNA ++KPSE++ ++ +LA+L+ +Y+D +V G V ET+ LL Q++D I YT
Sbjct: 125 AIAAGNAAIVKPSELSENTAKILAELLPQYLDQDLYMIVNGGVEETTELLRQRFDHILYT 184
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
GN+ V +IVM AAAKHLTPV LELGGKSP D +L VACRR+ GK+ N GQ CI+
Sbjct: 185 GNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDRDCDLDVACRRITWGKY-MNCGQTCIA 243
Query: 263 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+I+ FYG+N S D RI+N HF R+ LL+ K++
Sbjct: 244 PDYILCEASLQDQIVQKIKDTVKDFYGENVKASPDYERIINLRHFKRIKSLLEGQKIA-- 301
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
GGE D+ IAPT+L DV +S +M EEIFGP+LPI++V +E++ + IN KPL
Sbjct: 302 --FGGETDEATRYIAPTILTDVDPNSKVMQEEIFGPILPIVSVKNVEEAINFINDREKPL 359
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 442
A Y+F++N KL ++ ++ S+GG+ ND +H V+SLPFGGV SGMGAYHGK+SFD F
Sbjct: 360 ALYIFSHNNKLIKRVIDETSSGGVTGNDVIMHFTVNSLPFGGVGASGMGAYHGKYSFDTF 419
Query: 443 SHKKAVLSRGFIGDV--PVRYPPYTKGKLRLLKVLI 476
SH++ L +G G+ +RYPP ++ K+ K +
Sbjct: 420 SHQRPCLLKGLKGESVNKLRYPPNSESKVSWSKFFL 455
|
|
| RGD|61866 Aldh3a2 "aldehyde dehydrogenase 3 family, member A2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1014 (362.0 bits), Expect = 2.6e-102, P = 2.6e-102
Identities = 207/456 (45%), Positives = 290/456 (63%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
V+ LR TF SG+++ +R+ QL++L +M+ ERE DI+ A+ DL K EL + +EV +
Sbjct: 5 VQRLRQTFRSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLSKSELNAYSHEVITI 64
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
I L L + AK ++ T A + PEP GVVLII WNYPF+L+L P+VG
Sbjct: 65 LGEIDFMLGNLPELASARPAKKNLLTMMDEAYVQPEPLGVVLIIGAWNYPFVLTLQPLVG 124
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGNA ++KPSE++ ++ +LA+L+ +Y+D +V G V ET+ LL Q++D I YT
Sbjct: 125 AIAAGNAAIVKPSELSENTAKILAELLPQYLDQDLYMIVNGGVEETTELLRQRFDHILYT 184
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
GN+ V +IVM AAAKHLTPV LELGGKSP D +L VACRR+ GK+ N GQ CI+
Sbjct: 185 GNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDRDCDLDVACRRITWGKY-MNCGQTCIA 243
Query: 263 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+I+ FYG+N S D RI+N HF R+ LL+ K++
Sbjct: 244 PDYILCEASSQDQIVQKIKDTVKDFYGENVKASPDYERIINLRHFKRIKSLLEGQKIA-- 301
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
GGE D+ IAPT+L DV +S +M EEIFGP+LPI++V +E++ + IN KPL
Sbjct: 302 --FGGETDEATRYIAPTILTDVDPNSKVMQEEIFGPILPIVSVKNVEEAINFINDREKPL 359
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 442
A Y+F++N KL ++ ++ S+GG+ ND +H V+SLPFGGV SGMGAYHGK+SFD F
Sbjct: 360 ALYIFSHNNKLIKRVIDETSSGGVTGNDVIMHFTVNSLPFGGVGASGMGAYHGKYSFDTF 419
Query: 443 SHKKAVLSRGFIGDV--PVRYPPYTKGKLRLLKVLI 476
SH++ L +G G+ +RYPP ++ K+ K +
Sbjct: 420 SHQRPCLLKGLKGESVNKLRYPPNSESKVSWSKFFL 455
|
|
| UNIPROTKB|P30839 Aldh3a2 "Fatty aldehyde dehydrogenase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1014 (362.0 bits), Expect = 2.6e-102, P = 2.6e-102
Identities = 207/456 (45%), Positives = 290/456 (63%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
V+ LR TF SG+++ +R+ QL++L +M+ ERE DI+ A+ DL K EL + +EV +
Sbjct: 5 VQRLRQTFRSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLSKSELNAYSHEVITI 64
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
I L L + AK ++ T A + PEP GVVLII WNYPF+L+L P+VG
Sbjct: 65 LGEIDFMLGNLPELASARPAKKNLLTMMDEAYVQPEPLGVVLIIGAWNYPFVLTLQPLVG 124
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGNA ++KPSE++ ++ +LA+L+ +Y+D +V G V ET+ LL Q++D I YT
Sbjct: 125 AIAAGNAAIVKPSELSENTAKILAELLPQYLDQDLYMIVNGGVEETTELLRQRFDHILYT 184
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
GN+ V +IVM AAAKHLTPV LELGGKSP D +L VACRR+ GK+ N GQ CI+
Sbjct: 185 GNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDRDCDLDVACRRITWGKY-MNCGQTCIA 243
Query: 263 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+I+ FYG+N S D RI+N HF R+ LL+ K++
Sbjct: 244 PDYILCEASSQDQIVQKIKDTVKDFYGENVKASPDYERIINLRHFKRIKSLLEGQKIA-- 301
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
GGE D+ IAPT+L DV +S +M EEIFGP+LPI++V +E++ + IN KPL
Sbjct: 302 --FGGETDEATRYIAPTILTDVDPNSKVMQEEIFGPILPIVSVKNVEEAINFINDREKPL 359
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 442
A Y+F++N KL ++ ++ S+GG+ ND +H V+SLPFGGV SGMGAYHGK+SFD F
Sbjct: 360 ALYIFSHNNKLIKRVIDETSSGGVTGNDVIMHFTVNSLPFGGVGASGMGAYHGKYSFDTF 419
Query: 443 SHKKAVLSRGFIGDV--PVRYPPYTKGKLRLLKVLI 476
SH++ L +G G+ +RYPP ++ K+ K +
Sbjct: 420 SHQRPCLLKGLKGESVNKLRYPPNSESKVSWSKFFL 455
|
|
| UNIPROTKB|F1NH33 ALDH3A2 "Aldehyde dehydrogenase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 996 (355.7 bits), Expect = 2.1e-100, P = 2.1e-100
Identities = 209/476 (43%), Positives = 297/476 (62%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
V R F+SG+++ +R+ QL++L +M+ E+E +I+ A+ DL K + +E+ +
Sbjct: 8 VGRARAAFSSGRSRPLEFRLQQLRNLQRMVQEKEQEILAAIGADLHKCGHNAYSHEIMGV 67
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
+ A+++L W P K ++ T A I PEP GVVL+I WNYPF+L + P++G
Sbjct: 68 LGELALAMEKLPSWAAPRPVKKNLLTLRDEAYINPEPLGVVLVIGAWNYPFVLVMQPLIG 127
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGNA+V+KPSEV+ +S ++A ++ +Y+D VV G V ET+ LL+Q++D I YT
Sbjct: 128 AIAAGNAVVVKPSEVSEHTSQMIANILPQYLDPELYPVVTGGVPETTELLEQRFDHILYT 187
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
GNS V +IVMAAAAKHLTPV LELGGKSP D+ +L VACRR+ GK+ N GQ CI+
Sbjct: 188 GNSAVGKIVMAAAAKHLTPVTLELGGKSPCYIDTDCDLAVACRRIAWGKY-MNCGQTCIA 246
Query: 263 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+++ FYG++ + D RI+N HF R+ LL+ K++
Sbjct: 247 PDYVLCHPSIQSQVVENIKATLQEFYGEDVKKCPDYERIINKRHFKRIMNLLEGQKIA-- 304
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
HGGE D+ IAPT+L DV +S +M EEIFGP+LPI++V ++++ + IN KPL
Sbjct: 305 --HGGETDEASCFIAPTILTDVSVESKVMEEEIFGPVLPIVSVKNVDEAIEFINRREKPL 362
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 442
A Y+F+NNKKL ++ + S+GG+ ND +H + SLPFGGV SGMGAYHGK SFD F
Sbjct: 363 ALYVFSNNKKLIKRVISETSSGGVTGNDVIMHFFLASLPFGGVGNSGMGAYHGKHSFDTF 422
Query: 443 SHKKAVLSRGFI--GDVPVRYPPYTKGKLRLLKVLISGSL----LGIIR---ALLG 489
SH ++ L + G VRYPP ++ KL K I L +G+I ALLG
Sbjct: 423 SHHRSCLIKDLKMEGTNMVRYPPSSQKKLDWAKFFILKRLNVGRVGLITLALALLG 478
|
|
| MGI|MGI:1353452 Aldh3a2 "aldehyde dehydrogenase family 3, subfamily A2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 992 (354.3 bits), Expect = 5.6e-100, P = 5.6e-100
Identities = 202/456 (44%), Positives = 286/456 (62%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
V LR F SG+++ +R+ QL++L +M+ ERE +I+ A+ DL K EL + +EV +
Sbjct: 5 VLRLRQAFRSGRSRPLRFRLQQLEALRRMVQEREKEILAAIAADLSKSELNAYSHEVITI 64
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
I L L + AK ++ T A + PEP GVVLII WNYPF+L++ P+VG
Sbjct: 65 LGEIDFMLGNLPELASARPAKKNLLTMMDEAYVQPEPLGVVLIIGAWNYPFVLTMQPLVG 124
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGNA ++KPSE++ ++ +LA+L+ +Y+D +V G + ET+ LL Q++D I YT
Sbjct: 125 AIAAGNAAIVKPSELSENTAKILAELLPQYLDQDLYAIVNGGIPETTELLKQRFDHILYT 184
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
GN+ V +IVM AAAKHLTPV LELGGKSP D +L VACRR+ GK+ N GQ CI+
Sbjct: 185 GNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDRDCDLDVACRRIAWGKY-MNCGQTCIA 243
Query: 263 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+I+ FYG+N S D RI+N HF RL LL K++
Sbjct: 244 PDYILCEASLQNQIVQKIKETVKDFYGENIKASPDYERIINLRHFKRLQSLLKGQKIA-- 301
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
GGE D+ +APT+L DV +S +M EEIFGP+LPI++V ++++ + IN KPL
Sbjct: 302 --FGGEMDEATRYLAPTILTDVDPNSKVMQEEIFGPILPIVSVKNVDEAINFINDREKPL 359
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 442
A Y+F+ N KL ++ ++ S+GG+ ND +H V+SLPFGGV SGMGAYHGK+SFD F
Sbjct: 360 ALYVFSRNNKLIKRVIDETSSGGVTGNDVIMHFTVNSLPFGGVGASGMGAYHGKYSFDTF 419
Query: 443 SHKKAVLSRGFIGDV--PVRYPPYTKGKLRLLKVLI 476
SH++ L +G G+ +RYPP ++ K+ K +
Sbjct: 420 SHQRPCLLKGLKGESVNKLRYPPNSESKVSWAKFFL 455
|
|
| ZFIN|ZDB-GENE-040912-103 aldh3a2b "aldehyde dehydrogenase 3 family, member A2b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 992 (354.3 bits), Expect = 5.6e-100, P = 5.6e-100
Identities = 200/449 (44%), Positives = 279/449 (62%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
V+ R F +G++KS +R+SQLK+L + + ER+ +I +AL++DL + E +S+YE +
Sbjct: 8 VERARKAFFTGRSKSLEYRISQLKNLQRFMQERQKEIAEALKKDLKRSEFGTSLYETLGV 67
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
++ I ALK+LK W P S+ T I PEP GVVLII WNYP+ +++ P+VG
Sbjct: 68 ESEINLALKKLKEWAAPRPVNKSLMTISDQVYIQPEPLGVVLIIGAWNYPWAVTVGPLVG 127
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGNA V+KPSEV+ +S ++ + + Y+D VV G V ET LL Q++D I YT
Sbjct: 128 AIAAGNAAVIKPSEVSAHTSKVMEEFLPLYLDKELYPVVTGGVKETQELLKQRFDHIFYT 187
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
GN V +I+M AAAKHLTP LELGGKSP D +L +ACRR+ GK+ N GQ CI+
Sbjct: 188 GNGMVGKIIMEAAAKHLTPTTLELGGKSPCYIDKDCDLTIACRRIAWGKYS-NCGQTCIA 246
Query: 263 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+I+ FY +NP + D RI+N HF RL L++
Sbjct: 247 PDYILCDPSIQDRVIEEIKKNIKEFYTENPQKCPDYGRIINQRHFKRLMSLME----GSS 302
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
I GE ++ + IAPT+L DV D+ +M EEIFGPLLPI+TV+ ++++ IN KPL
Sbjct: 303 IAVSGEHNEAECYIAPTVLRDVKPDAKVMQEEIFGPLLPIVTVNSVDEAIKFINQRDKPL 362
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 442
A Y+F+++KKL + + S+GGL+ ND +H +V SLPFGGV +SGMG YHGK FD
Sbjct: 363 ALYIFSSDKKLIDRMIAETSSGGLMANDCLMHFSVSSLPFGGVGDSGMGRYHGKHGFDNL 422
Query: 443 SHKKAVLSRGFIGDV--PVRYPPYTKGKL 469
SH + VL + + +RYPP+T KL
Sbjct: 423 SHMRGVLLKQLKMEAVNKMRYPPHTADKL 451
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q80VQ0 | AL3B1_MOUSE | 1, ., 2, ., 1, ., 5 | 0.4361 | 0.9066 | 0.9551 | yes | no |
| P51648 | AL3A2_HUMAN | 1, ., 2, ., 1, ., 3 | 0.4403 | 0.9107 | 0.9257 | yes | no |
| P11883 | AL3A1_RAT | 1, ., 2, ., 1, ., 5 | 0.4650 | 0.8843 | 0.9624 | yes | no |
| Q9I6C8 | CALB_PSEAE | 1, ., 2, ., 1, ., 6, 8 | 0.3446 | 0.9350 | 0.9684 | yes | no |
| P39616 | ALDH2_BACSU | 1, ., 2, ., 1, ., 3 | 0.4140 | 0.9087 | 0.9824 | yes | no |
| Q8VXQ2 | ALDH_CRAPL | 1, ., 2, ., 1, ., 3 | 0.6205 | 0.9614 | 0.9895 | N/A | no |
| Q04458 | HFD1_YEAST | 1, ., 2, ., 1, ., - | 0.3166 | 0.9350 | 0.8665 | yes | no |
| Q54DG1 | ALDH3_DICDI | 1, ., 2, ., 1, ., 5 | 0.4079 | 0.8904 | 0.9340 | yes | no |
| Q5RF60 | AL3A2_PONAB | 1, ., 2, ., 1, ., 3 | 0.4403 | 0.9107 | 0.9257 | yes | no |
| Q9A777 | CALB_CAUCR | 1, ., 2, ., 1, ., 6, 8 | 0.3400 | 0.8722 | 0.8865 | yes | no |
| Q70DU8 | AL3H1_ARATH | 1, ., 2, ., 1, ., 3 | 0.7071 | 0.9695 | 0.9876 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 1.2.1.28 | LOW CONFIDENCE prediction! |
| 3rd Layer | 1.2.1 | 0.976 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 493 | |||
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 0.0 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 0.0 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 0.0 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 0.0 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 0.0 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 0.0 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 0.0 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 0.0 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 1e-165 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 1e-162 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 1e-110 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-93 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 5e-86 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 1e-80 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 3e-77 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 7e-64 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 2e-59 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 2e-58 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 6e-57 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 2e-55 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 8e-55 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 2e-53 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 4e-52 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 7e-52 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 3e-51 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 2e-50 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 2e-50 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 5e-50 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 1e-49 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 2e-48 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 5e-48 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 6e-48 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 9e-48 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 1e-47 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 5e-47 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 6e-47 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 3e-46 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 4e-46 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 2e-45 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 4e-45 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 5e-45 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 5e-45 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 7e-45 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 2e-44 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 3e-44 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 8e-44 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-43 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 6e-43 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 2e-42 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 4e-42 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 8e-42 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 8e-42 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 1e-41 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 1e-41 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 1e-40 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 2e-40 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 4e-40 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 7e-40 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 5e-39 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 3e-38 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 4e-38 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 7e-38 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 2e-37 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 2e-37 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 1e-36 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 2e-36 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 3e-36 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 4e-36 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 1e-35 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 2e-35 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 9e-35 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 2e-34 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 5e-34 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 7e-34 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 1e-33 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 4e-33 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 6e-32 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 9e-32 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 1e-31 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 5e-31 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 7e-31 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 1e-30 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 2e-29 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 9e-29 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 2e-28 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 5e-28 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 2e-25 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 2e-24 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 5e-24 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 7e-23 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 5e-21 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 5e-20 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 1e-18 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 1e-18 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 3e-18 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 5e-18 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 5e-14 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 1e-13 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 4e-13 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 3e-10 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 9e-10 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 6e-09 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 2e-08 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 2e-08 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 4e-08 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 5e-07 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 2e-06 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 4e-06 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 3e-05 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 1e-04 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 6e-04 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 736 bits (1902), Expect = 0.0
Identities = 286/431 (66%), Positives = 350/431 (81%)
Query: 19 ASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYE 78
A V+ELR TF SG+T+S WR SQLK L+++++E E DI ALRQDL KP ES E
Sbjct: 1 APRLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDE 60
Query: 79 VALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLD 138
V++L +S K A+KELK WM PEK KT +TTFP+ AEIV EP GVVL+IS WN+PFLLSL+
Sbjct: 61 VSVLVSSCKLAIKELKKWMAPEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLE 120
Query: 139 PVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDK 198
PV+GAIAAGNA+VLKPSE+APA+S+LLAKL+ EY+D +I+V+EG V ET+ALL+QKWDK
Sbjct: 121 PVIGAIAAGNAVVLKPSELAPATSALLAKLIPEYLDTKAIKVIEGGVPETTALLEQKWDK 180
Query: 199 ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQ 258
I +TG+ RV RI+MAAAAKHLTPV LELGGK PV+ DS ++LKVA RR+ GKWGCNNGQ
Sbjct: 181 IFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQ 240
Query: 259 ACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK 318
ACI+PD+++ + +AP L+++LKN LE F+G+NP ESKDLSRIVNS+HF RLS+LLDD
Sbjct: 241 ACIAPDYVLVEESFAPTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPS 300
Query: 319 VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG 378
V+ KIVHGGERD+ L I PT+LLD P DS IM+EEIFGPLLPI+TV KIE+S +IINS
Sbjct: 301 VADKIVHGGERDEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSR 360
Query: 379 TKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFS 438
KPLAAY+FT NK+LK++ V S+GG+ NDT V A+ +LPFGGV ESG GAYHGKFS
Sbjct: 361 PKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKFS 420
Query: 439 FDVFSHKKAVL 449
FD FSHKKAVL
Sbjct: 421 FDAFSHKKAVL 431
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 692 bits (1787), Expect = 0.0
Identities = 339/480 (70%), Positives = 412/480 (85%)
Query: 12 EVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE 71
++F A AS+ V ELR +F G T+ Y WRV+QLK LM + + EP+IV ALR DL KPE
Sbjct: 5 KMFGAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPE 64
Query: 72 LESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNY 131
LESS+YEV+LL+ SIK ALK+LK+WM PEKAKTS+TTFP+SAEIV EP GVVL+IS WNY
Sbjct: 65 LESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNY 124
Query: 132 PFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSAL 191
PFLLS+DPV+GAI+AGNA+VLKPSE+APASS+LLAKL+ +Y+D S++RVVEGAV ET+AL
Sbjct: 125 PFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQYLDSSAVRVVEGAVTETTAL 184
Query: 192 LDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK 251
L+QKWDKI YTG+S++ R++MAAAAKHLTPV+LELGGKSPVV DS +LKV RR+I GK
Sbjct: 185 LEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGK 244
Query: 252 WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLS 311
WGCNNGQACISPD+I+TTK+YAPK+++++K ELE FYGKNP+ESKD+SRIVNS HF RLS
Sbjct: 245 WGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLS 304
Query: 312 KLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 371
KLLD+ +VS KIV+GGE+D+ L+IAPT+LLDVP DSLIMSEEIFGPLLPILT++ +E+S
Sbjct: 305 KLLDEKEVSDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEES 364
Query: 372 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 431
FD+I S KPLAAYLFT+NKKLK++F TVSAGG+V+ND AVHLA+H+LPFGGV ESGMG
Sbjct: 365 FDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMG 424
Query: 432 AYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWS 491
AYHGKFSFD FSHKKAVL R GD VRYPPY++GKLRLLK L+ ++ I + LLG S
Sbjct: 425 AYHGKFSFDAFSHKKAVLYRSLFGDSAVRYPPYSRGKLRLLKALVDSNIFDIFKVLLGLS 484
|
Length = 484 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 633 bits (1635), Expect = 0.0
Identities = 222/427 (51%), Positives = 297/427 (69%), Gaps = 5/427 (1%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
V LR TF +GKT+S WR +QLK+L +ML E E +I AL DL KP E+ + E+A++
Sbjct: 4 VARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVV 63
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
I ALK LK WM P + + P+ A ++PEP GVVLII PWNYP L+L P++G
Sbjct: 64 LGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIG 123
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGN +VLKPSE+APA+S+LLAKL+ +Y D ++ VVEG V +ALL + +D I +T
Sbjct: 124 AIAAGNTVVLKPSELAPATSALLAKLIPKYFDPEAVAVVEGGVEVATALLAEPFDHIFFT 183
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
G+ V +IVM AAAKHLTPV LELGGKSP + D NL+VA RR+ GK+ N GQ CI+
Sbjct: 184 GSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFL-NAGQTCIA 242
Query: 263 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+++ + +L+E LK ++ FYG++P ES D RI+N HF RL+ LLDD GK
Sbjct: 243 PDYVLVHESIKDELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDD----GK 298
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
+V GG+ DK + IAPT+L DV DS +M EEIFGP+LPILT D ++++ + INS KPL
Sbjct: 299 VVIGGQVDKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPL 358
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 442
A YLF+ +K ++++ + S+GG+ +ND +H A+ +LPFGGV SGMGAYHGK FD F
Sbjct: 359 ALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTF 418
Query: 443 SHKKAVL 449
SH K+VL
Sbjct: 419 SHLKSVL 425
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 614 bits (1585), Expect = 0.0
Identities = 226/451 (50%), Positives = 314/451 (69%), Gaps = 5/451 (1%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
V++ R F +G TK +R+ QLK L + + + E +I++AL++DL K E E+ + E+ +
Sbjct: 4 VEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFV 63
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
+ I A+K LK WM P++ KT + FPS + I EP+GVVLII+PWNYPF L+L P++G
Sbjct: 64 LSEINYAIKHLKKWMKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIG 123
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGN VLKPSE+ P +S ++AK++ E D + VVEG V E LLDQK+D I +T
Sbjct: 124 AIAAGNTAVLKPSELTPNTSKVIAKIIEETFDEEYVAVVEGGVEENQELLDQKFDYIFFT 183
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
G+ RV +IVM AAAKHLTPV LELGGKSP + D NLK+A +R++ GK+ N GQ C++
Sbjct: 184 GSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKF-LNAGQTCVA 242
Query: 263 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+++ + K ++ LK E++ FYG++PLES D RI+N HF RL+ LLD+ GK
Sbjct: 243 PDYVLVHESVKEKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDN----GK 298
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
IV GG D+ L I PT+L +V D +M EEIFGP+LP+LT D ++++ +II S KPL
Sbjct: 299 IVFGGNTDRETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPL 358
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 442
A YLF+ +KK++++ +E +S GG INDT +HLA LPFGGV SGMG+YHGK+SFD F
Sbjct: 359 ALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYLPFGGVGNSGMGSYHGKYSFDTF 418
Query: 443 SHKKAVLSRGFIGDVPVRYPPYTKGKLRLLK 473
SHKK++L + D+P+RYPPY K +L K
Sbjct: 419 SHKKSILKKSTWFDLPLRYPPYKGKKKKLKK 449
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 592 bits (1527), Expect = 0.0
Identities = 250/473 (52%), Positives = 327/473 (69%), Gaps = 3/473 (0%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
V ELR T+ SG+T+S WR SQLK L+++L + E I AL QDL K +E+ EV +L
Sbjct: 12 VAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVL 71
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
S AL LK WM P+KAK + FP++AE+VPEP GVVLI S WN+P LSL+P++G
Sbjct: 72 TKSANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIG 131
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGNA+VLKPSE+APA+S+ LA + +Y+D +++V+EG A LL KWDKI +T
Sbjct: 132 AIAAGNAVVLKPSELAPATSAFLAANIPKYLDSKAVKVIEGGPAVGEQLLQHKWDKIFFT 191
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD---SGINLKVACRRMIMGKWGCNNGQA 259
G+ RV RI+M AAAKHLTPV LELGGK P + D S + KVA R++ GKWG GQA
Sbjct: 192 GSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGGKWGSCAGQA 251
Query: 260 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV 319
CI+ D+++ + +AP L+E LK+ ++ F+G+NP ESK ++RI+N HF RLS LL D +V
Sbjct: 252 CIAIDYVLVEERFAPILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDPRV 311
Query: 320 SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 379
+ IVHGG D+ KL I PT+LL+ P DS IM+EEIFGPLLPI+TV KIEDS INS
Sbjct: 312 AASIVHGGSIDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKP 371
Query: 380 KPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF 439
KPLA Y FTNN+KLK++ + S+G + ND + A SLPFGGV ESG G YHGK+SF
Sbjct: 372 KPLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSF 431
Query: 440 DVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWSK 492
D FSH+KAVL R + + RYPP+ KL L+++ G++ LLG +
Sbjct: 432 DTFSHEKAVLRRSLLTEFEFRYPPWNDFKLGFLRLVYRFDYFGLLLLLLGLKR 484
|
Length = 484 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 584 bits (1508), Expect = 0.0
Identities = 220/445 (49%), Positives = 303/445 (68%), Gaps = 7/445 (1%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
V+ R F+SGKT+ +R+ QL++L++ML E E +IV+AL +DL KP+ E+ + E+ L+
Sbjct: 4 VRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLV 63
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
K IK A+ L WM PE K ++ T I EP GVVLII WNYP L+L P+VG
Sbjct: 64 KNEIKYAISNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVG 123
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGN +V+KPSEV+PA++ LLA+L+ +Y+D VV G V ET+ LL Q++D I YT
Sbjct: 124 AIAAGNCVVIKPSEVSPATAKLLAELIPKYLDKECYPVVLGGVEETTELLKQRFDYIFYT 183
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
G++ V +IVM AAAKHLTPV LELGGKSP D ++ VA RR+ GK+ N GQ CI+
Sbjct: 184 GSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKF-INAGQTCIA 242
Query: 263 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+++ T + K +E+LK L+ FYG++P ES D RI+N HF RL KLL GK
Sbjct: 243 PDYVLCTPEVQEKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLS----GGK 298
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
+ GG+ D+ + IAPT+L DV +M EEIFGP+LPI+TV+ ++++ + INS KPL
Sbjct: 299 VAIGGQTDEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPL 358
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 442
A Y+F+NNKK+ + + S+GG+ +NDT +H + SLPFGGV SGMGAYHGK+SFD F
Sbjct: 359 ALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSLPFGGVGNSGMGAYHGKYSFDTF 418
Query: 443 SHKKAVLSRGFIGD--VPVRYPPYT 465
SHK++ L + + +RYPPY+
Sbjct: 419 SHKRSCLVKSLNMEKLNSLRYPPYS 443
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 548 bits (1415), Expect = 0.0
Identities = 214/479 (44%), Positives = 311/479 (64%), Gaps = 6/479 (1%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
+ E VK+L+ +F +GKT+ +R QL++L++ML E + + +A+ +DL + E+
Sbjct: 5 NPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFET 64
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFL 134
+ EV L I+ LK L ++ PEK T P + I+PEP GVVL+I WNYP
Sbjct: 65 KMTEVLLTVAEIEHLLKHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLN 124
Query: 135 LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQ 194
L+L P+ GAIAAGN +VLKPSE++P +S L+AKL+ +Y+D S +RV+EG V T+ LL +
Sbjct: 125 LTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKYLDPSYVRVIEGGVEVTTELLKE 184
Query: 195 KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC 254
+D I +TG+ RV ++VM AAA++LTP LELGGKSPV+ D NLKVA RR+ GK+
Sbjct: 185 PFDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFL- 243
Query: 255 NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLL 314
N GQ C++PD+++ + K +E+LK ++ F+G++P +S+D SRIVN H RL++L+
Sbjct: 244 NAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELI 303
Query: 315 DDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDI 374
D GK+V+GGE D +APT++++ DS +M EEIFGP+LPILT + I++ +
Sbjct: 304 KDHG--GKVVYGGEVDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEF 361
Query: 375 INSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYH 434
INS KPLA Y F +K+ K+ +E S+G +VIND HL +LPFGGV SGMGAYH
Sbjct: 362 INSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYH 421
Query: 435 GKFSFDVFSHKKAVLSRGF--IGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWS 491
GK+ FD FSH K VL++ D+ +RYPPYT K +L L+ + + +L
Sbjct: 422 GKYGFDTFSHPKPVLNKSTGNSFDLSLRYPPYTSFKSWVLSFLL-KLSIPVQSEVLKSR 479
|
Length = 493 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 526 bits (1356), Expect = 0.0
Identities = 208/428 (48%), Positives = 283/428 (66%), Gaps = 4/428 (0%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
LR TF SGKTK +R+ QLK L + + E IV+AL++DL +P E+ + EV+ +
Sbjct: 11 HSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGV 70
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTF-PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVV 141
K I LK LK W EK K F I EP GVVLII PWNYP LL+L P+V
Sbjct: 71 KNDILHMLKNLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLV 130
Query: 142 GAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICY 201
GAIAAG +VLKPSE+ P +++LLA+LV +Y+D + +VV+G V ET+ALL+QK+DKI Y
Sbjct: 131 GAIAAGCTVVLKPSELTPHTAALLAELVPKYLDPDAFQVVQGGVPETTALLEQKFDKIFY 190
Query: 202 TGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACI 261
TG+ RV RI+ AAAKHLTPV LELGGKSPV+ +L++A +R++ GK+G N GQ C+
Sbjct: 191 TGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILWGKFG-NAGQICV 249
Query: 262 SPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG 321
+PD+++ + +E LK L+ FY S D +RIVN HF RL LLD K G
Sbjct: 250 APDYVLVDPSVYDEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTTK--G 307
Query: 322 KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKP 381
K+V GGE D+ I PT++ DV D +MSEE+FGP+LPI+ VD ++++ +INS P
Sbjct: 308 KVVIGGEMDEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTP 367
Query: 382 LAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDV 441
LA Y+FT++K + +GG+VINDT +H+ V + PFGGV +SG GAYHGK+ FD
Sbjct: 368 LALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDT 427
Query: 442 FSHKKAVL 449
F+H++ V+
Sbjct: 428 FTHERTVV 435
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 474 bits (1221), Expect = e-165
Identities = 188/442 (42%), Positives = 268/442 (60%), Gaps = 13/442 (2%)
Query: 11 NEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKP 70
VF A + + + + R+++LK L K + R +I+ AL D KP
Sbjct: 1 RRVFAA---------QQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKP 51
Query: 71 ELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWN 130
E + E+ + + I A+K LK WM P++ +T + F + ++I EP GV LIISPWN
Sbjct: 52 AAEVDLTEILPVLSEINHAIKHLKKWMKPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWN 111
Query: 131 YPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSA 190
YPF L+ P+V AIAAGN +LKPSE+ P +S+++AK++ E D + V EG A
Sbjct: 112 YPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDEVAVFEGDAEVAQA 171
Query: 191 LLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMG 250
LL+ +D I +TG+ V +IVMAAAAKHL V LELGGKSP + D +LK A +++ G
Sbjct: 172 LLELPFDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWG 231
Query: 251 KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP--LESKDLSRIVNSNHFA 308
K+ N GQ CI+PD++ + +E LK E+E FYGK+ S DL+RIVN HF
Sbjct: 232 KF-LNAGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFD 290
Query: 309 RLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK 367
RL LLDD G K+ GG+ D + IAPT+L +V D IM EEIFGP+LPI+T +
Sbjct: 291 RLKGLLDDAVAKGAKVEFGGQFDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYED 350
Query: 368 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQE 427
+++ + IN+ KPLA Y+F+ +K + + S+GG+V+ND +H +LPFGGV
Sbjct: 351 LDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFGGVNN 410
Query: 428 SGMGAYHGKFSFDVFSHKKAVL 449
SG+G+YHG + F FSH++AVL
Sbjct: 411 SGIGSYHGVYGFKAFSHERAVL 432
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 466 bits (1201), Expect = e-162
Identities = 166/422 (39%), Positives = 242/422 (57%), Gaps = 13/422 (3%)
Query: 37 SYGWRVSQLKSLMKMLNEREPDIVDALRQDL-DKPELESSIYEVALLKTSIKSALKELKH 95
S R +L L +L + + + +A+ D + E+ + E+ IK A K LK
Sbjct: 18 SLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKK 77
Query: 96 WMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPS 155
WM P + + P+ AE+ +P GVV II PWNYP L+L P++ A+AAGN +++KPS
Sbjct: 78 WMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPS 137
Query: 156 EVAPASSSLLAKLVGEYMDLSSIRVVEGAV---AETSALLDQKWDKICYTGNSRVARIVM 212
E P +S+LLA+L+ EY D + VV G A S+L +D + +TG++ V R VM
Sbjct: 138 EFTPRTSALLAELLAEYFDEDEVAVVTGGADVAAAFSSL---PFDHLLFTGSTAVGRHVM 194
Query: 213 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 272
AAA++LTPV LELGGKSP + +L A R+ GK N GQ C++PD+++ +D
Sbjct: 195 RAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLL-NAGQTCVAPDYVLVPEDK 253
Query: 273 APKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVH----GGE 328
+ + + K + Y ++ D + I+N H+ARL LL+D + G V GE
Sbjct: 254 LEEFVAAAKAAVAKMYP-TLADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGE 312
Query: 329 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 388
++ PTL+L+V D +M EEIFGP+LPILT D ++++ D IN+ +PLA Y F
Sbjct: 313 DFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFG 372
Query: 389 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+K + + + +GG+ INDT +H+A LPFGGV SGMGAYHGK F FSH K V
Sbjct: 373 EDKAEQDRVLRRTHSGGVTINDTLLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPV 432
Query: 449 LS 450
Sbjct: 433 FK 434
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 334 bits (858), Expect = e-110
Identities = 135/434 (31%), Positives = 220/434 (50%), Gaps = 13/434 (2%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
V R F + R + L+ L +L ER ++ + KP +E ++ EVA
Sbjct: 4 VAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKP-IEEALGEVARA 62
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
+ + + A + EP GVV I+PWN+P LL+ +
Sbjct: 63 ADTFRYYAGLARRLHGEVIP---SPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAP 119
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKI 199
A+AAGN +VLKPSE+ P ++ LLA+L+ E + + VV G E A L + DKI
Sbjct: 120 ALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKI 179
Query: 200 CYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQA 259
+TG++ V + +M AAA++L V LELGGKSP++ +L A + + G +G N GQ
Sbjct: 180 SFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFG-NAGQV 238
Query: 260 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDK 318
C + ++ + + +E L ++ NPL+ D+ ++++ R+ ++D K
Sbjct: 239 CTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAK 298
Query: 319 VSG-KIVHGGERDKNKLR--IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDII 375
G K++ GG+R + + PT+L DV D I EEIFGP+LP++ E++ ++
Sbjct: 299 AEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELA 358
Query: 376 NSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG 435
N LAA +FT + + + E + AG + IND +V A S PFGGV++SG+G G
Sbjct: 359 NDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVG-AEPSAPFGGVKQSGIGREGG 417
Query: 436 KFSFDVFSHKKAVL 449
+ + ++ K V
Sbjct: 418 PYGLEEYTEPKTVT 431
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 292 bits (749), Expect = 1e-93
Identities = 136/441 (30%), Positives = 209/441 (47%), Gaps = 13/441 (2%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
D +AA V R F + S R + L+ + +L R ++ + + KP E+
Sbjct: 37 DVDAA---VAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELAALITLETGKPISEA 93
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFL 134
E+A I+ +E + +T T S A + EP GVV I+PWN+P
Sbjct: 94 RG-EIARAADFIRYYAEEARRLE----GETIPTDKGSKALVRREPLGVVGAITPWNFPLA 148
Query: 135 LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL- 192
L+ + A+AAGN +VLKPSE P S+ LA+L E + + VV G AE L
Sbjct: 149 LAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALV 208
Query: 193 -DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK 251
D I +TG++ V R + AAAA +L PV LELGGKSP + +L A + G
Sbjct: 209 AHPDVDAISFTGSTAVGRAIAAAAAANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGA 268
Query: 252 WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARL 310
+ N GQ C + +I + + +E L + +PL S DL +++ R+
Sbjct: 269 FF-NAGQRCTAASRLIVHESVYDEFVERLVARAASLKVGDPLDPSTDLGPLISEEQLDRV 327
Query: 311 SKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED 370
++D G + G + + PT+L V D I EEIFGP+LP++ E+
Sbjct: 328 EGYIEDAVAEGARLLAGGKRPGGYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEE 387
Query: 371 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGM 430
+ ++ N LAA +FT + + + AG + IND + LPFGGV++SG+
Sbjct: 388 AIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGL 447
Query: 431 GAYHGKFSFDVFSHKKAVLSR 451
G GK+ + F+ K V +
Sbjct: 448 GREGGKYGLEEFTEVKTVTIK 468
|
Length = 472 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 268 bits (688), Expect = 5e-86
Identities = 122/423 (28%), Positives = 192/423 (45%), Gaps = 66/423 (15%)
Query: 30 FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSA 89
F + R + L+ + +L ER ++ + KP +E ++ EVA + + A
Sbjct: 7 FKAWAALPPAERAAILRKIADLLEERREELAALETLETGKP-IEEALGEVARAIDTFRYA 65
Query: 90 LKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNA 149
PE A + EP GVV +I+PWN+P LL+ + A+AAGN
Sbjct: 66 AGLADKLGGPE---LPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNT 122
Query: 150 LVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSR 206
+VLKPSE+ P ++ LA+L+ E + + VV G E A L + DKI +TG++
Sbjct: 123 VVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGSTA 182
Query: 207 VARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 266
V + +M AAA++L PV LELGGKSPV+ D +L A + G + N GQ C +
Sbjct: 183 VGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFF-NAGQICTAA--- 238
Query: 267 ITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHG 326
SR+ +VH
Sbjct: 239 --------------------------------SRL---------------------LVHE 245
Query: 327 GERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 386
D+ ++ T+L+DV D I EEIFGP+LP++ E++ + N L A +
Sbjct: 246 SIYDEFVEKLV-TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGV 304
Query: 387 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 446
FT + + E + AG + IND+++ + PFGGV+ SG+G G + + ++ K
Sbjct: 305 FTRDLNRALRVAERLRAGTVYINDSSIGVGPE-APFGGVKNSGIGREGGPYGLEEYTRTK 363
Query: 447 AVL 449
V+
Sbjct: 364 TVV 366
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 257 bits (659), Expect = 1e-80
Identities = 127/406 (31%), Positives = 203/406 (50%), Gaps = 17/406 (4%)
Query: 51 MLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFP 110
+L ER ++ + + KP E+ EV +++ + + E +
Sbjct: 63 LLEERRDELAELETLETGKPLAEARG-EVPRAIDTLRYYAGLARK-LEGETLPSDPGVL- 119
Query: 111 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 170
A EP GVV I+PWN+P LL+ + A+AAGN +VLKPSE+ P ++ LLA+L
Sbjct: 120 --AYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELFE 177
Query: 171 EYMDLSS--IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 226
E L + VV G+ +E L DK+ +TG++ V R + AAAK+L V LEL
Sbjct: 178 E-AGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAKNLKRVTLEL 236
Query: 227 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 285
GGK+P +VFD +L A + G +G N GQ C + ++ + + +E L +
Sbjct: 237 GGKNPLIVFDDA-DLDAAVEGAVFGAFG-NAGQVCTAGSRLLVHESIYDEFVERLVEAAK 294
Query: 286 NFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR-IAPTLLL 342
+ +PL+ D+ +++ R+ ++D K G K++ GGE K + PT+L
Sbjct: 295 SLKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTVLA 354
Query: 343 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 402
DV D I EEIFGP+L ++ +++ ++ N LAA +FTN+ + + +
Sbjct: 355 DVTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVARRLE 414
Query: 403 AGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
AG + IND LPFGG ++SG G GK + ++ K V
Sbjct: 415 AGMVWINDYTTGDPEA-LPFGGFKQSGFGREGGKEGLEEYTETKTV 459
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 248 bits (636), Expect = 3e-77
Identities = 131/415 (31%), Positives = 207/415 (49%), Gaps = 10/415 (2%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R +L + L + ++ + L + KP ++ + EV L +I A + + P
Sbjct: 42 RAQRLLRWKRALADHADELAELLHAETGKPRADAGL-EVLLALEAIDWAARNAPRVLAPR 100
Query: 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160
K T + A + P+GVV +ISPWNYP L + ++ A+AAGNA+VLKPSEV P
Sbjct: 101 KVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPL 160
Query: 161 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHL 219
LLA+ ++VV G A +AL+D DK+ +TG+ R VMAAAA+ L
Sbjct: 161 VGELLAEAWAAAGPPQGVLQVVTGDGATGAALIDAGVDKVAFTGSVATGRKVMAAAAERL 220
Query: 220 TPVLLELGGKSPVVFDSGINLKVACRRMIMGKWG--CNNGQACISPDHIITTKDYAPKLL 277
PV+LELGGK P++ + +L+ A + WG N GQ CIS + + + + +
Sbjct: 221 IPVVLELGGKDPMIVLADADLERAAAAAV---WGAMVNAGQTCISVERVYVHESVYDEFV 277
Query: 278 ESLKNELENF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKL 334
L + G + + D+ + + + + +DD G K + GG R +
Sbjct: 278 ARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGP 337
Query: 335 RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394
PT+L DVP D +M EE FGP+LP++ V +++ + N L+A +F+ +
Sbjct: 338 FYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARA 397
Query: 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449
+ + AG + IND + + +LPFGGV++SG G HG F KA+
Sbjct: 398 EAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 214 bits (546), Expect = 7e-64
Identities = 131/408 (32%), Positives = 206/408 (50%), Gaps = 20/408 (4%)
Query: 45 LKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKT 104
L+SL+K + E + +I +D K +++S+ E+ + I+ LK + + PE
Sbjct: 46 LRSLLKYILENQEEICRVACRDTGKTMVDASLGEILVTCEKIRWTLKHGEKALRPESRPG 105
Query: 105 SITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164
+ F A + EP GVV I WNYPF L P++ A+ AGNA+V+K SE SS
Sbjct: 106 GLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGF 165
Query: 165 LAKLV-------GEYMDLSSIRVVEGAVAETSALLDQ-KWDKICYTGNSRVARIVMAAAA 216
++ G DL +++V AL D I + G+ V + VMAAAA
Sbjct: 166 FLSIIRECLAACGHDPDL--VQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAA 223
Query: 217 KHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPK 275
+ LTPV+LELGGK P +V D +L ++ G + ++GQ CI + +I + K
Sbjct: 224 ESLTPVVLELGGKDPAIVLDD-ADLDQIASIIMRGTFQ-SSGQNCIGIERVIVHEKIYDK 281
Query: 276 LLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER---- 329
LLE L + ++ PL+ D+ +++ F RL +L+ D G +++ GG+R
Sbjct: 282 LLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHP 341
Query: 330 -DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 388
PTLL+DV D I EE+FGP++ ++ E++ +I NS L A +F
Sbjct: 342 EYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFG 401
Query: 389 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGK 436
+ K ++ + G + IND V+ V LPFGGV+ SG G + G+
Sbjct: 402 KDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGE 449
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 201 bits (513), Expect = 2e-59
Identities = 106/357 (29%), Positives = 179/357 (50%), Gaps = 23/357 (6%)
Query: 107 TTFPSSAE-----IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161
PS + P GVV +ISP+N+P +L++ V A+A GNA+VLKP P +
Sbjct: 81 EILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVT 140
Query: 162 SSLL-AKLVGEYMDLSS--IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAA 216
LL A++ E L + VV G +E L + I +TG++ V R + A
Sbjct: 141 GGLLIAEIF-EEAGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAG 199
Query: 217 KHLTPVLLELGGKSPVVF--DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAP 274
+HL V LELGG +P++ D+ ++L V+ G + + GQ C++ I+ +
Sbjct: 200 RHLKKVALELGGNNPLIVLDDADLDLAVSA--AAFGAF-LHQGQICMAAGRILVHESVYD 256
Query: 275 KLLESLKNELENF-YGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK 331
+ +E L + + G +P + + ++N R+ +++D +G +++ GG +
Sbjct: 257 EFVEKLVAKAKALPVG-DPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTYEG 315
Query: 332 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 391
+ PT+L DV D I EEIFGP+ P++ D E++ ++ N L+A +FT +
Sbjct: 316 LFYQ--PTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDL 373
Query: 392 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+ F E + G + IND V+ H PFGGV+ SG G + G S + F+ + +
Sbjct: 374 ERAMAFAERLETGMVHINDQTVNDEPHV-PFGGVKASGGGRFGGPASLEEFTEWQWI 429
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 198 bits (507), Expect = 2e-58
Identities = 119/349 (34%), Positives = 186/349 (53%), Gaps = 19/349 (5%)
Query: 111 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 170
+ A +V EP GVVL I+PWN P +L + +AAGN +VLK SE++P + L+ ++
Sbjct: 90 TLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFH 149
Query: 171 E------YMDLSSIRVVEGAVAETSALLDQKW-DKICYTGNSRVARIVMAAAAKHLTPVL 223
E +++ + E A AL+ K+ +TG++RV RI+ AAKHL PVL
Sbjct: 150 EAGLPKGVLNVVTHSP-EDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVL 208
Query: 224 LELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKN 282
LELGGK+P +V + +L A + G + N+GQ C+S + II + A + +E LK
Sbjct: 209 LELGGKAPAIVLEDA-DLDAAANAALFGAF-LNSGQICMSTERIIVHESIADEFVEKLKA 266
Query: 283 ELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK--LRIAPT 339
E + L +V++ R+ +L+DD G K+V GG D++ + PT
Sbjct: 267 AAEKLFAG----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMPPT 322
Query: 340 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 399
+L +V D I SEE FGP++ I+ V E++ I N L+A +FT + +
Sbjct: 323 ILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAK 382
Query: 400 TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+ +G + IN VH +LP GGV+ SG G ++GK+ D F+ K +
Sbjct: 383 RIESGAVHINGMTVHDE-PTLPHGGVKSSGYGRFNGKWGIDEFTETKWI 430
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 195 bits (498), Expect = 6e-57
Identities = 105/352 (29%), Positives = 174/352 (49%), Gaps = 14/352 (3%)
Query: 107 TTFPSSAE-----IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161
T PS + V P GVV I+P+NYP +L+ V A+AAGN +VLKPSE P
Sbjct: 102 ETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVI 161
Query: 162 SSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKH 218
+A+++ E + VV G AE L D + + +TG++ V R + A +H
Sbjct: 162 GLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRH 221
Query: 219 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLE 278
L + LELGGK+P++ + +L A R G + + GQ C+S II + + ++
Sbjct: 222 LKKITLELGGKNPLIVLADADLDYAVRAAAFGAF-MHQGQICMSASRIIVEEPVYDEFVK 280
Query: 279 SLKNELENFYGKNPLESKD-LSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRI 336
+P + + +++ R+ + ++D G K++ GG+ D N
Sbjct: 281 KFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYDGN--FY 338
Query: 337 APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396
PT+L DV D I EE FGP+ ++ E++ ++ N L+A + TN+ + +
Sbjct: 339 QPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFK 398
Query: 397 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
E + +G + IND + H +PFGGV+ SG G G++S + F+ K +
Sbjct: 399 LAERLESGMVHINDPTILDEAH-VPFGGVKASGFGREGGEWSMEEFTELKWI 449
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 191 bits (488), Expect = 2e-55
Identities = 117/362 (32%), Positives = 177/362 (48%), Gaps = 32/362 (8%)
Query: 107 TTFPSSA-----EIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161
T PS A ++ +P GVV I+PWN+P + + A+AAG +VLKP+E P S
Sbjct: 100 RTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLS 159
Query: 162 SSLLAKL---------VGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARI 210
+ LA+L V + VV G+ AE L + KI +TG++ V ++
Sbjct: 160 ALALAELAEEAGLPAGV--------LNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKL 211
Query: 211 VMAAAAKHLTPVLLELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITT 269
+MA AA + V LELGG +P VFD +L A I K+ N GQ C+ + I
Sbjct: 212 LMAQAADTVKRVSLELGGNAPFIVFDD-ADLDKAVDGAIASKFR-NAGQTCVCANRIYVH 269
Query: 270 KDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG 327
+ + +E L ++ N L+ D+ ++N ++ L++D G K++ GG
Sbjct: 270 ESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGG 329
Query: 328 ERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 386
+R PT+L DV D LIM+EE FGP+ PI+ D ++ N LAAY+
Sbjct: 330 KRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYV 389
Query: 387 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 446
FT + + E + AG + IN + + PFGGV+ESG+G GK + + K
Sbjct: 390 FTRDLARAWRVAEALEAGMVGINTGLI--SDAEAPFGGVKESGLGREGGKEGLEEYLETK 447
Query: 447 AV 448
V
Sbjct: 448 YV 449
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 189 bits (483), Expect = 8e-55
Identities = 101/344 (29%), Positives = 176/344 (51%), Gaps = 16/344 (4%)
Query: 115 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-M 173
++ EP GVV II+PWN+PFL+ + A+AAG +V+KPSE ++ +LA+L+ E +
Sbjct: 115 VLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGL 174
Query: 174 DLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 231
+ +V G A + D + +TG++RV + + AAAA++L V LELGGK+P
Sbjct: 175 PAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNP 234
Query: 232 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN 291
+ + +L A ++ G + N G+ C S ++ + A + ++ +
Sbjct: 235 QIVFADADLDAAADAVVFGVY-FNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGD 293
Query: 292 PL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD--KNKLRIAPTLLLDVPRD 347
PL + I+N A+++ +D + G ++ GGER L PT+ DV D
Sbjct: 294 PLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPD 353
Query: 348 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 407
I EEIFGP+L +LT D ++++ + N L+A +++ + + AG +
Sbjct: 354 MAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVW 413
Query: 408 IN---DTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+N D + LPFGG ++SG+G G++ + ++ K V
Sbjct: 414 VNTFLDGSPE-----LPFGGFKQSGIGRELGRYGVEEYTELKTV 452
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 185 bits (473), Expect = 2e-53
Identities = 105/346 (30%), Positives = 170/346 (49%), Gaps = 23/346 (6%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
+P GV +I+PWN P +L + A+A GN +VLKPSE P ++ LLA+L E +
Sbjct: 116 QPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPG 175
Query: 177 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VV 233
+ VV G E A L D I +TG + R +M AAA +L PV LELGGK+P +V
Sbjct: 176 VVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIV 235
Query: 234 FDSGINLKVACR---RMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK 290
F +L A R NNG+ C++ I+ + + LE +
Sbjct: 236 FADA-DLDRAVDAAVRSSFS----NNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVG 290
Query: 291 NPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR-----IAPTLLLD 343
+PL ++ +++ H ++ ++ + G I+ GG R + + PT++
Sbjct: 291 DPLDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITG 350
Query: 344 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 403
+ DS + EEIFGP++ ++ D E++ ++ N LAAY++T + + + A
Sbjct: 351 LDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEA 410
Query: 404 GGLVINDTAV-HLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
G + +N V L PFGGV+ SG+G G +S + ++ K V
Sbjct: 411 GTVWVNCWLVRDL---RTPFGGVKASGIGREGGDYSLEFYTELKNV 453
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 182 bits (464), Expect = 4e-52
Identities = 114/417 (27%), Positives = 206/417 (49%), Gaps = 19/417 (4%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHW---M 97
R++ L+ +L +R + + + KP ++ + EV +++ A +E +
Sbjct: 45 RMAILERAADLLKKRAEEFAKIIACEGGKP-IKDARVEVDRAIDTLRLAAEEAERIRGEE 103
Query: 98 TPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEV 157
P A A + EP GVVL I+P+N+P L + AIA G +VLKP+
Sbjct: 104 IPLDATQGSDN--RLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASK 161
Query: 158 APASSSLLAKLV---GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAA 214
P S+ LAK++ G + + E V + D++ + +TG++ V + A
Sbjct: 162 TPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRAN 221
Query: 215 AAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC-NNGQACISPDHIITTKDYA 273
A + LELGG +PV+ D +L A + G G + GQ CIS I ++
Sbjct: 222 AGG--KRIALELGGNAPVIVDRDADLDAAIEALAKG--GFYHAGQVCISVQRIYVHEELY 277
Query: 274 PKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDD-KVSGKIVHGGERDK 331
+ +E+ ++ +PL+ D+ +++ R+ + +++ + +++ GGERD
Sbjct: 278 DEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGERDG 337
Query: 332 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 391
+ PT+L DVPRD+ + +EE FGP++PI+ D E++ I NS L A +FT +
Sbjct: 338 ALFK--PTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDL 395
Query: 392 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+ + E + GG+++ND++ +PFGGV+ESG+G ++ + + +K V
Sbjct: 396 NVAFKAAEKLEVGGVMVNDSS-AFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTV 451
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 182 bits (464), Expect = 7e-52
Identities = 112/342 (32%), Positives = 168/342 (49%), Gaps = 18/342 (5%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE--YMDL 175
EP GV I PWN+P L+ + A+AAGN +VLKP+E P S+ LA+L+ E +
Sbjct: 140 EPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPP- 198
Query: 176 SSIRVVEG--AVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSP 231
+ +V G A +A+ DKI +TG++ V R +M AAAK +L V LELGGKSP
Sbjct: 199 GVVNIVPGFGPTA-GAAISSHMDVDKIAFTGSTAVGRTIMEAAAKSNLKKVTLELGGKSP 257
Query: 232 -VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK 290
+VFD +L A G + N GQ C + I + + +E K E
Sbjct: 258 NIVFDDA-DLDKAVEWAAFGIF-FNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVG 315
Query: 291 NPLESKDL-SRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRD 347
+P + V+ F ++ ++ K G ++ GGER +K I PT+ DV D
Sbjct: 316 DPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDD 375
Query: 348 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 407
I EEIFGP++ IL ++ + N LAA +FT + + + AG +
Sbjct: 376 MKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVW 435
Query: 408 INDTAV-HLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+N V ++PFGG ++SG G G+ + ++ KAV
Sbjct: 436 VNTYNVFD---AAVPFGGFKQSGFGRELGEEGLEEYTQVKAV 474
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 180 bits (458), Expect = 3e-51
Identities = 104/319 (32%), Positives = 169/319 (52%), Gaps = 11/319 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE-YMDLS 176
EP GVV I+P+N+P L V AIAAGNA+VLKP+ P S+ LA+L+ E +
Sbjct: 122 EPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPKG 181
Query: 177 SIRVVEGAVAET-SALL-DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 234
++ VV G+ AL+ D + I +TG+ V + A L V LELG + V+
Sbjct: 182 ALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSNAAVIV 239
Query: 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL- 293
D+ +L+ A R + G + N GQ CIS I +D + LE + +PL
Sbjct: 240 DADADLEKAVERCVSGAF-ANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLD 298
Query: 294 ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLIMS 352
E D+ +++ R+ + +++ G +++ GG+RD L PT+L DVP D ++
Sbjct: 299 EDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGAIL--EPTVLTDVPPDMKVVC 356
Query: 353 EEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA 412
EE+F P++ + D ++++ + N L A +FTN+ + + + GG++IND++
Sbjct: 357 EEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVMINDSS 416
Query: 413 VHLAVHSLPFGGVQESGMG 431
H +P+GGV+ESG G
Sbjct: 417 TFRVDH-MPYGGVKESGTG 434
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 179 bits (455), Expect = 2e-50
Identities = 137/448 (30%), Positives = 217/448 (48%), Gaps = 40/448 (8%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLN--EREPDIVDALRQ-DLDKPELESSIYEV 79
VK R F S +K G +L L K+ + E+ D++ A+ D KP +++ ++
Sbjct: 51 VKAARKAFESWWSKVTGEERGEL--LDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDL 108
Query: 80 ALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDP 139
I + ++ W + KT T+ A + EP+GV I PWNYP ++
Sbjct: 109 D----EIIAVIRYYAGWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWK 164
Query: 140 VVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAET-SALLDQ-KW 196
+ A+AAGN +V+KP+E P S A LV E + ++ G A SAL +
Sbjct: 165 LAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDV 224
Query: 197 DKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGC- 254
DKI +TG++ R+VM AAA++L V LE GGKSP +VF+ +L A KW
Sbjct: 225 DKIAFTGSTATGRLVMKAAAQNLKAVTLECGGKSPALVFEDA-DLDQAV------KWAAA 277
Query: 255 ----NNGQACISPDHIITTKDYAPKLLESLKNEL-ENFYGKNPLESK-DLSRIVNSNHFA 308
N+GQ C + I + K +E + +N+ +P + + V+ +
Sbjct: 278 GIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYD 337
Query: 309 RLSKLLDDDKVSG-KIVHGGERDKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLPIL 363
R+ ++ K G K+V+GGE+ L I PT+ DVP+D I+ EEIFGP++ I
Sbjct: 338 RVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVIS 397
Query: 364 TVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN---DTAVHLAVHSL 420
E++ N T LAA +FT + + + + AG + IN D+ V +
Sbjct: 398 KFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVG-----V 452
Query: 421 PFGGVQESGMGAYHGKFSFDVFSHKKAV 448
PFGG + SG+G G++ + ++ KAV
Sbjct: 453 PFGGFKMSGIGRELGEYGLETYTQTKAV 480
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 177 bits (452), Expect = 2e-50
Identities = 132/460 (28%), Positives = 205/460 (44%), Gaps = 46/460 (10%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
AE V+ R F K + R L+++ + + ER ++ + +D KP E+
Sbjct: 17 TAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEA 76
Query: 75 SI----------YEVAL---LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFG 121
+ Y L L F A + EP G
Sbjct: 77 AWDVDDVAGCFEYYADLAEQLDAK------------AERAVPLPSEDF--KARVRREPVG 122
Query: 122 VVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRV 180
VV +I+PWN+P L++ V A+AAG +VLKPSE+ + LA++ E + + V
Sbjct: 123 VVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPGVLNV 182
Query: 181 VEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVF-DS 236
V G E A L DKI +TG++ VM AAA+ + PV LELGGKSP +VF D+
Sbjct: 183 VTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFDDA 242
Query: 237 GINLKVACRRMIMGKWGC--NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE 294
+ V M GC NNGQ C + ++ + A LE L E +PLE
Sbjct: 243 DLEKAV---EWAMF--GCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLE 297
Query: 295 SK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---IAPTLLLDVPRDSL 349
L +V+ + ++ + K G +++ GG R + + IAPT+ DVP DS
Sbjct: 298 EGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSR 357
Query: 350 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
I EEIFGP+L + + +++ + N LAA + + + + + E + AG + IN
Sbjct: 358 IWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWIN 417
Query: 410 DTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449
P+GG + SG+G G++ D + K +
Sbjct: 418 --CSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT 455
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 177 bits (450), Expect = 5e-50
Identities = 101/348 (29%), Positives = 163/348 (46%), Gaps = 19/348 (5%)
Query: 116 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 175
V EP GVV I PWN P +L+ + A+ AGN +VLK +E AP + LLA+++ + +
Sbjct: 114 VREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQVLPA 173
Query: 176 SSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV 233
+ V+ G E A L DK+ +TG++ V +I+ AAA L PV LELGGKSP++
Sbjct: 174 GVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMI 233
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL 293
+L A I G GQ+C + + +D LE L +L +PL
Sbjct: 234 VFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPL 293
Query: 294 -ESKDLSRIVNSNHFARLSKLLDDDKV--SGKIVHGGE-----RDKNKLRIAPTLLLDVP 345
E+ D+ I++ FA++ +D ++ GG + + PT+ V
Sbjct: 294 DEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVD 353
Query: 346 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 405
+ + EEIFGP+L + ++ + N LAAY++T + + + AG
Sbjct: 354 NEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGW 413
Query: 406 LVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF----DVFSHKKAVL 449
+ +N +GG ++SG+G + S + F+ KK V
Sbjct: 414 VQVNQGGGQQP--GQSYGGFKQSGLGR---EASLEGMLEHFTQKKTVN 456
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 175 bits (447), Expect = 1e-49
Identities = 120/408 (29%), Positives = 201/408 (49%), Gaps = 24/408 (5%)
Query: 52 LNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALK-----ELKHWMTPEKAKTSI 106
L ER +IV+ L ++ ++++I E + A E + + K +
Sbjct: 67 LEERRDEIVEWLIRESGSTRIKANI-EWGAAMAITREAATFPLRMEGRILPSDVPGKENR 125
Query: 107 TTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLA 166
+ EP GVV +ISPWN+P LS+ V A+A GNA+VLKP+ P + LL
Sbjct: 126 --------VYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLL 177
Query: 167 KLVGEYMDLSS--IRVVEGAVAET-SALLDQKWDK-ICYTGNSRVARIVMAAAAKHLTPV 222
+ E L + VV GA +E A ++ + I +TG++ V R + A +HL V
Sbjct: 178 AKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKV 237
Query: 223 LLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKN 282
LELGG +P V ++ A + GK+ + GQ C++ + II +D + +E
Sbjct: 238 ALELGGNNPFVVLEDADIDAAVNAAVFGKFL-HQGQICMAINRIIVHEDVYDEFVEKFVE 296
Query: 283 ELENFYGKNPLESKDL-SRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTL 340
++ +P + + ++N + L ++ G ++ GGE + N L PT+
Sbjct: 297 RVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEAEGNVL--EPTV 354
Query: 341 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 400
L DV D I EEIFGP+ PI+ D E++ ++ N L+ +FT++ + QF
Sbjct: 355 LSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARR 414
Query: 401 VSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+ AG IND V+ H +PFGG + SG+G ++G+++ + F+ K +
Sbjct: 415 IDAGMTHINDQPVNDEPH-VPFGGEKNSGLGRFNGEWALEEFTTDKWI 461
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 172 bits (439), Expect = 2e-48
Identities = 109/324 (33%), Positives = 177/324 (54%), Gaps = 8/324 (2%)
Query: 113 AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY 172
A V EP GVV I+P+N+P L + AIA GN++V+KPS P ++ LAK++ E
Sbjct: 117 AFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEA 176
Query: 173 -MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGK 229
+ I VV G +E + + K + I +TG++ V ++ + A V LELGG
Sbjct: 177 GLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGS 236
Query: 230 SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG 289
P++ +L+ A + G++ N GQ C + I+ ++ K L+ L +++
Sbjct: 237 DPMIVLKDADLERAVSIAVRGRF-ENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKV 295
Query: 290 KNPL-ESKDLSRIVNSNHFARLSKLLDDD-KVSGKIVHGGERDKNKLRIAPTLLLDVPRD 347
+PL ES DL +++ R+ L++D + GKI++GG+RD+ PT+L + D
Sbjct: 296 GDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRDEGSF-FPPTVLENDTPD 354
Query: 348 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 407
++M EE+FGP+LPI V E++ +I NS L A +FTN+ + + AGG+V
Sbjct: 355 MIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVV 414
Query: 408 INDTAVHLAVHSLPFGGVQESGMG 431
IND+ +LPFGG ++SG+G
Sbjct: 415 INDSTR-FRWDNLPFGGFKKSGIG 437
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 171 bits (435), Expect = 5e-48
Identities = 108/338 (31%), Positives = 170/338 (50%), Gaps = 11/338 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
EP GVV I PWN+P + + V A+AAGN +VLKP+E+ P S+ +A+L+ E
Sbjct: 116 EPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAG 175
Query: 177 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VV 233
+ VV G A L DKI +TG++ V R +M AA +L V LELGGKS +V
Sbjct: 176 VLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIV 235
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL 293
F +L A R G + N GQ C + ++ + + LE + + +PL
Sbjct: 236 FADA-DLDAAVRAAATGIFY-NQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPL 293
Query: 294 ESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDSLI 350
+ K + +V+ F R+ +D + G +++ GG+R + + PT+ VP + I
Sbjct: 294 DPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRI 353
Query: 351 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 410
EEIFGP++ ++ E++ I N LAA ++T + + + AG + IN
Sbjct: 354 AQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWIN- 412
Query: 411 TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
T S PFGG ++SG G G+ + D ++ K+V
Sbjct: 413 TYNRFDPGS-PFGGYKQSGFGREMGREALDEYTEVKSV 449
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 171 bits (436), Expect = 6e-48
Identities = 108/344 (31%), Positives = 167/344 (48%), Gaps = 15/344 (4%)
Query: 116 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MD 174
EP GVV I+PWN P LL + A+AAGN +VLKPSE PAS+ LAKL E
Sbjct: 116 RREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFP 175
Query: 175 LSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 232
+ VV G ET L + KI +TG + R + AAA++L PV LELGGKSP
Sbjct: 176 PGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPN 235
Query: 233 -VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN 291
VFD +L A ++ G + GQ C++ ++ + + +E L +
Sbjct: 236 IVFDDA-DLDAAVNGVVAGIFA-AAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGD 293
Query: 292 PLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR-----IAPTLLLDV 344
PL+ + + + ++ + + + G +++ GGER PT+L DV
Sbjct: 294 PLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADV 353
Query: 345 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 404
D I EE+FGP+L ++ D E++ + N LAA ++T + + + AG
Sbjct: 354 TNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAG 413
Query: 405 GLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+ +N S PFGG ++SG+G +G + ++ K+V
Sbjct: 414 TVWVNT--YRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSV 455
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 170 bits (434), Expect = 9e-48
Identities = 103/349 (29%), Positives = 170/349 (48%), Gaps = 15/349 (4%)
Query: 110 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV 169
P + EP GVV I+PWN+PF L+L + A+AAGN +VLKP+ P S+ LL +++
Sbjct: 114 PGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEII 173
Query: 170 GEYMDLSS--IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLE 225
E DL + + VV G+ L D + D + +TG++ V R +MA AA L VLLE
Sbjct: 174 AE-TDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLE 232
Query: 226 LGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNEL 284
LGGKS +V D +L A + N GQ C ++ + +++E+L
Sbjct: 233 LGGKSANIVLD-DADLAAAAPAAVGV-CMHNAGQGCALTTRLLVPRSRYDEVVEALAAAF 290
Query: 285 ENFYGKNPLESKDLS-RIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---IAPT 339
E +P + + ++++ R+ + + G ++V GG R + + PT
Sbjct: 291 EALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPT 350
Query: 340 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 399
L DV D I EEIFGP+L ++ D +++ I N L+ +++ + +
Sbjct: 351 LFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVAR 410
Query: 400 TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+ G + IN + PFGG ++SG+G +G + F K++
Sbjct: 411 RIRTGSVGIN-GGGGYGPDA-PFGGYKQSGLGRENGIEGLEEFLETKSI 457
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 170 bits (432), Expect = 1e-47
Identities = 96/322 (29%), Positives = 155/322 (48%), Gaps = 9/322 (2%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS- 177
P GVV +ISP+N+P +L++ V A+A GNA+VLKP P S ++ + E L +
Sbjct: 110 PLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAG 169
Query: 178 -IRVVEGAVAETSAL-LDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235
+ V+ G AL D I +TG++ V R V AA +HL V LELGGK+ ++
Sbjct: 170 VLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVL 229
Query: 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLES 295
+L +A G + + GQ C++ + + A L + ++ +P
Sbjct: 230 DDADLDLAASNGAWGAFL-HQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATG 288
Query: 296 K-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSE 353
+ L ++N+ R+ ++DD +G ++ GG D L PT+L V E
Sbjct: 289 QVALGPLINARQLDRVHAIVDDSVAAGARLEAGGTYD--GLFYRPTVLSGVKPGMPAFDE 346
Query: 354 EIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAV 413
EIFGP+ P+ D E++ + N L+A + + + + + G L IND V
Sbjct: 347 EIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTV 406
Query: 414 HLAVHSLPFGGVQESGMGAYHG 435
+ H+ PFGG+ SG G+ G
Sbjct: 407 NDEPHN-PFGGMGASGNGSRFG 427
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 169 bits (430), Expect = 5e-47
Identities = 93/341 (27%), Positives = 169/341 (49%), Gaps = 16/341 (4%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
P GVV I PWN+PF L + A+ GN +V+KPSE P ++ A+LV E L +
Sbjct: 132 VPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAELVDE-AGLPA 190
Query: 178 --IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV 233
+ +V G + L K I TG++ + +M AAA+++T V LELGGK+P +
Sbjct: 191 GVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVSLELGGKAPAI 250
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL 293
+L +A + ++ + N GQ C + + +D + +E L +++ +P
Sbjct: 251 VMKDADLDLAVKAIVDSRII-NCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPF 309
Query: 294 ESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK--LRIAPTLLLDVPRDSL 349
++ D+ +VN ++ ++++ +G ++ GG+R + + PT+L +V +D
Sbjct: 310 DAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDME 369
Query: 350 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
I+ EEIFGP+LP++ ++++ ++ N L +Y++T N + + G IN
Sbjct: 370 IVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETYIN 429
Query: 410 DTA--VHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
H+ G ++SG+G GK + + K V
Sbjct: 430 RENFEAMQGFHA----GWKKSGLGGADGKHGLEEYLQTKVV 466
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 168 bits (428), Expect = 6e-47
Identities = 115/346 (33%), Positives = 170/346 (49%), Gaps = 20/346 (5%)
Query: 116 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 175
V EP GV I PWNYP ++ V A+AAGNA+V+KP+E AP ++ LA+L E L
Sbjct: 114 VREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEE-AGL 172
Query: 176 --SSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 231
++ VV G AE A L D I +TG+ VM AAA+++ PV LELGGKSP
Sbjct: 173 PAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSP 232
Query: 232 -VVF---DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF 287
+VF D L V +I N GQ C + ++ + ++LE L
Sbjct: 233 QIVFADADLEAALPVVVNAIIQ-----NAGQTCSAGSRLLVHRSIYDEVLERLVERFRAL 287
Query: 288 YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR----IAPTLLL 342
LE DL ++++ R+ + + G +IV GG + +APTLL
Sbjct: 288 RVGPGLEDPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLD 347
Query: 343 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 402
DVP DS + EEIFGP+L ++ D ++ + N L A ++T + + +
Sbjct: 348 DVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLR 407
Query: 403 AGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
AG + +N+ + LPFGGV++SG G G + ++ K V
Sbjct: 408 AGQVFVNNYGAGGGI-ELPFGGVKKSGHGREKGLEALYNYTQTKTV 452
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 166 bits (423), Expect = 3e-46
Identities = 96/355 (27%), Positives = 171/355 (48%), Gaps = 19/355 (5%)
Query: 110 PSSAEIVP--------EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161
P++ E +P EP GVV I+PWNYP +++ + A+AAGN +VLKPSE P +
Sbjct: 101 PAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLT 160
Query: 162 SSLLAKLVGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHL 219
+ LLA+L E + + VV G A L + + TG+ R + V AAA L
Sbjct: 161 TLLLAELAAEVLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTL 220
Query: 220 TPVLLELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLE 278
V LELGGK+PV VFD +L A + + N GQ C + + + + +
Sbjct: 221 KRVHLELGGKAPVIVFDD-ADLDAAVAGIATAGY-YNAGQDCTAACRVYVHESVYDEFVA 278
Query: 279 SLKNELENF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRI 336
+L + G E ++ + ++ R++ ++ +++ GG R +
Sbjct: 279 ALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAPAHARVLTGGRRAEGPGYFY 338
Query: 337 APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396
PT++ V +D I+ EEIFGP++ + D +++ ++ N LA+ ++T + +
Sbjct: 339 EPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMR 398
Query: 397 FVETVSAGGLVINDTAVHLAVHS-LPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 450
+ G + +N H+ + + +P GG ++SG G ++ + ++ K V+
Sbjct: 399 LSARLDFGTVWVNT---HIPLAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVMV 450
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 166 bits (424), Expect = 4e-46
Identities = 122/455 (26%), Positives = 204/455 (44%), Gaps = 46/455 (10%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
D + A V R F + S R + L+ + + R ++ A+ ++ P +
Sbjct: 37 DVDRA---VAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQAITLEMGAPITLA 93
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFL 134
+V L +++A LK ++ +V EP GV +I+PWN+P
Sbjct: 94 RAAQVGLGIGHLRAAADALK--------DFEFEERRGNSLVVREPIGVCGLITPWNWPLN 145
Query: 135 LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS--IRVVEGAVAETSALL 192
+ V A+AAG +VLKPSEVAP S+ +LA+++ E L + +V G L
Sbjct: 146 QIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILDE-AGLPAGVFNLVNGDGPVVGEAL 204
Query: 193 --DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIM 249
D + +TG++R + V AAA + V LELGGKS ++ D +L+ A R +
Sbjct: 205 SAHPDVDMVSFTGSTRAGKRVAEAAADTVKRVALELGGKSANIILDDA-DLEKAVPRGVA 263
Query: 250 GKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKD-LSRIVNSNHFA 308
+ N+GQ+C +P ++ + + E E + +P + L + ++ F
Sbjct: 264 ACFA-NSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQF- 321
Query: 309 RLSKLLDDDKVSGKI----------VHGG-ERDKNKLR---IAPTLLLDVPRDSLIMSEE 354
D+V G I V GG R + R + PT+ DV D I EE
Sbjct: 322 --------DRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREE 373
Query: 355 IFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH 414
IFGP+L I+ D +++ I N LA Y+++ + + + + AG + IN A +
Sbjct: 374 IFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAAFN 433
Query: 415 LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449
PFGG ++SG G G++ + F K++
Sbjct: 434 PG---APFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 164 bits (418), Expect = 2e-45
Identities = 106/348 (30%), Positives = 172/348 (49%), Gaps = 15/348 (4%)
Query: 110 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV 169
PS A + EP GV + I WNYP ++ + A+AAGNA+V KPSE P ++ +A+++
Sbjct: 124 PSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKVAEIM 183
Query: 170 GEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 226
E + VV+G AE LL K+ +TG + +MAAAA HL V +EL
Sbjct: 184 EEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAAGHLKHVTMEL 243
Query: 227 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 285
GGKSP +VFD +L+ A ++G + + GQ C + + K + L L E
Sbjct: 244 GGKSPLIVFDDA-DLESAVDGAMLGNF-FSAGQVCSNGTRVFVHKKIKERFLARLVERTE 301
Query: 286 NFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-----LRIAP 338
+P E+ ++ ++++ H ++ ++ K G + GG R +N + P
Sbjct: 302 RIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFFVEP 361
Query: 339 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398
T+ D D I+ EEIFGP++ +LT ++ N LA +FT + +
Sbjct: 362 TVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLGRAHRVA 421
Query: 399 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 446
+ + AG + IN +L PFGG ++SG+G +GK + ++ K
Sbjct: 422 DQLEAGTVWINT--YNLYPAEAPFGGYKQSGIGRENGKAALAHYTEVK 467
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 163 bits (414), Expect = 4e-45
Identities = 119/453 (26%), Positives = 189/453 (41%), Gaps = 69/453 (15%)
Query: 29 TFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKS 88
F + + S+ R + L+ L +L ER+ ++ + ++ KP + + EV K
Sbjct: 11 AFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKP-IAEARAEVE------KC 63
Query: 89 AL------KELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
A + + ++ E I T A + EP GVVL I PWN+PF
Sbjct: 64 AWICRYYAENAEAFLADEP----IETDAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAP 119
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLV-------GEYMDL-SSIRVVEGAVAETSALLDQ 194
+ AGN ++LK + P + + +L G + +L VE +A D
Sbjct: 120 NLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVEAIIA------DP 173
Query: 195 KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINL----KVACR-RMI 248
+ + TG+ R R V A A K+L +LELGG P +V D +L K A + R+
Sbjct: 174 RVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDA-DLDKAVKTAVKGRLQ 232
Query: 249 MGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF-----------YGKNPLESKD 297
N GQ+CI+ I +D + LE + G PL KD
Sbjct: 233 ------NAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLG--PLARKD 284
Query: 298 LSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEI 355
L L + +++ +G ++ GG+R D PT+L DV EE+
Sbjct: 285 L--------RDELHEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEEL 336
Query: 356 FGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHL 415
FGP+ ++ V E++ + N L +FT + + ++ + AG + IN
Sbjct: 337 FGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSD 396
Query: 416 AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
LPFGGV+ SG G G+F F + K V
Sbjct: 397 P--RLPFGGVKRSGYGRELGRFGIREFVNIKTV 427
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 164 bits (416), Expect = 5e-45
Identities = 102/350 (29%), Positives = 164/350 (46%), Gaps = 15/350 (4%)
Query: 113 AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY 172
+ EP GVV I PWN+P L++ + A+AAGN +VLKP+ P S +L +L+G+
Sbjct: 130 SYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGDL 189
Query: 173 MDLSSIRVVEGAVAET-SALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKS 230
+ + VV G +E L K+ +TG++ V R++M AA++L PV LELGGKS
Sbjct: 190 LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENLIPVTLELGGKS 249
Query: 231 P-VVFDSGINLKVA-CRRMIMGKWGC--NNGQACISPDHIITTKDYAPKLLESLKNELEN 286
P + FD ++ + G+ G N G+ C P + + + +E E
Sbjct: 250 PNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEA 309
Query: 287 FYGKNPLESKD-LSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-----DKNKLRIAPT 339
NPL+ + + V+ + ++ +D K G +++ GGER PT
Sbjct: 310 IKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPT 369
Query: 340 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 399
L+ D I EEIFGP+L ++T E++ I N L ++T + +
Sbjct: 370 LIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVAR 429
Query: 400 TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449
+ G + +N H PFGG ++SG+G K D + K +L
Sbjct: 430 GIQTGRVWVN--CYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNIL 477
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 164 bits (416), Expect = 5e-45
Identities = 94/343 (27%), Positives = 161/343 (46%), Gaps = 17/343 (4%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 177
P GVV +I+PWN+P + + A+ GN +V KP+E PA + L +L E +
Sbjct: 135 PIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGV 194
Query: 178 IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235
+ VV G E L + D + +TG++ V + A+ V LE+GGK+P++
Sbjct: 195 VNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKRVALEMGGKNPIIVM 254
Query: 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLES 295
+L +A + +G GQ C + +I + + L+ + + L+
Sbjct: 255 DDADLDLALEGALWSAFG-TTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDE 313
Query: 296 K-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLR----IAPTLLLDVPRDS 348
+ D+ ++N ++ + K G ++ GGER + PT+ DV D
Sbjct: 314 ETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDM 373
Query: 349 LIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVI 408
I EEIFGP++ ++ V +E++ +I N L++ ++T + + + AG +
Sbjct: 374 RIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYV 433
Query: 409 NDTAVHLAVHSLPFGGVQESGMGAYH---GKFSFDVFSHKKAV 448
N + VH LPFGGV++SG G H G + D F+ KAV
Sbjct: 434 NAPTIGAEVH-LPFGGVKKSGNG--HREAGTTALDAFTEWKAV 473
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 163 bits (415), Expect = 7e-45
Identities = 114/343 (33%), Positives = 177/343 (51%), Gaps = 20/343 (5%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
EP GV I PWN+P L+ + A+AAGN +VLKPSE+ P S+ + KL+ E
Sbjct: 143 EPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPG 202
Query: 177 SIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSP-V 232
I VV G + DK+ +TG++ V R VM AAAK +L V LELGGKSP +
Sbjct: 203 VINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTLELGGKSPNI 262
Query: 233 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESL-----KNELENF 287
VFD +L+ A G + N+GQ C + I + K ++ K ++ +
Sbjct: 263 VFDDA-DLESAVVWTAYGIF-FNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDP 320
Query: 288 YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVH-GGERDKNK-LRIAPTLLLDVP 345
+ ++ + +S+I + R+ ++ K G V GG+R N+ I PT+ DV
Sbjct: 321 FAEDTFQGPQVSQI----QYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVT 376
Query: 346 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 405
D I+ EEIFGP++ ++ E++ N T LAA +FTNN + + AG
Sbjct: 377 EDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGT 436
Query: 406 LVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+ +N +L H +PFGG ++SG+G G+++ + ++ KAV
Sbjct: 437 VWVN--CYNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAV 477
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 162 bits (412), Expect = 2e-44
Identities = 107/341 (31%), Positives = 172/341 (50%), Gaps = 11/341 (3%)
Query: 115 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-M 173
++ +P GVV I+PWN+P + V A+AAG +V+KPSE+ P ++ A+L + +
Sbjct: 156 VLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGI 215
Query: 174 DLSSIRVVEG-AVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 231
+ VV G A ALL K KI +TG++ V + +MA AA + V LELGG +P
Sbjct: 216 PPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAATVKRVSLELGGNAP 275
Query: 232 -VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK 290
+VFD +L VA + + K+ N+GQ C+ + I+ + K E+ ++
Sbjct: 276 FIVFDDA-DLDVAVKGALASKFR-NSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVG 333
Query: 291 NPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRI-APTLLLDVPRD 347
+ E ++N ++ + D G K++ GG+R PT+L DV D
Sbjct: 334 DGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTED 393
Query: 348 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 407
LI EE+FGP+ P+ E++ I N LAAY+FT + + + E + G +
Sbjct: 394 MLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVG 453
Query: 408 INDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+N+ + V PFGGV++SG+G K+ D + K V
Sbjct: 454 VNEGLISTEV--APFGGVKQSGLGREGSKYGIDEYLEIKYV 492
|
Length = 498 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 161 bits (410), Expect = 3e-44
Identities = 105/345 (30%), Positives = 170/345 (49%), Gaps = 15/345 (4%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
EP GV I WNYP ++ A+A GNA+V KPS P ++ LLA+++ E +
Sbjct: 115 EPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDG 174
Query: 177 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 234
VV+G ET LL + D K+ +TG+ + VM+AAAK + V LELGGKSP++
Sbjct: 175 VFNVVQGG-GETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLII 233
Query: 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL- 293
+L+ A +M + + GQ C + + + + E L + +PL
Sbjct: 234 FDDADLENAVNGAMMANF-LSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLD 292
Query: 294 ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER--DKNKLR----IAPTLLLDVPR 346
E + +++ H ++ ++ K G K++ GGER ++ L ++P +L D
Sbjct: 293 EDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTD 352
Query: 347 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 406
D I+ EEIFGP++ IL D E+ N T LAA +FT + + + + + AG
Sbjct: 353 DMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTC 412
Query: 407 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451
IN + +PFGG ++SG G +G + + ++ K V
Sbjct: 413 WINTYNISPV--EVPFGGYKQSGFGRENGTAALEHYTQLKTVYVE 455
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 8e-44
Identities = 104/351 (29%), Positives = 169/351 (48%), Gaps = 23/351 (6%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS- 177
P G V +I+PWN PF+LS + A+A GN +VLKP+E +P +++ LA++ E L
Sbjct: 135 PVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKE-AGLPDG 193
Query: 178 -IRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV-V 233
+V G E L D + +TG + I+M A L +ELGGKSPV V
Sbjct: 194 VFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLKRFSMELGGKSPVIV 253
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL 293
FD +L+ A ++ + NG+ C + ++ + A +E L + +PL
Sbjct: 254 FDDA-DLERALDAVVFMIFS-FNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPL 311
Query: 294 E-SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR--------IAPTLLLD 343
+ ++ +++ H A++ ++ + G I+ GGER + PT+
Sbjct: 312 DPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTG 371
Query: 344 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 403
I EEIFGP+L ++ E++ + N LA Y++TN+ + + A
Sbjct: 372 ADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEA 431
Query: 404 GGLVINDTAV-HLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV-LSRG 452
G + +N V HL PFGGV+ SG+G G +SFD ++ K V L+ G
Sbjct: 432 GMIWVNSQNVRHLPT---PFGGVKASGIGREGGTYSFDFYTETKNVALALG 479
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 160 bits (406), Expect = 1e-43
Identities = 106/362 (29%), Positives = 176/362 (48%), Gaps = 30/362 (8%)
Query: 108 TFPSS-----AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162
T PS+ E EP GVV +I+PWN+P + + A+A GN +V KP+E+ PAS+
Sbjct: 119 TLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASA 178
Query: 163 SLLAKLVGEY--------MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAA 214
L +++ E + + S V A+ E + D + +TG++ V R + AA
Sbjct: 179 WALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDV-----DAVSFTGSTAVGRRIAAA 233
Query: 215 AAKHLTPVLLELGGKSP-VVFDSG-INLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 272
AA V LE+GGK+P VV D ++L V C + G + + GQ C + +I T+
Sbjct: 234 AAARGARVQLEMGGKNPLVVLDDADLDLAVEC--AVQGAFF-STGQRCTASSRLIVTEGI 290
Query: 273 APKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD 330
+ +E+L + + L+ D+ +V+ + + ++ + G K+V+GGER
Sbjct: 291 HDRFVEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERL 350
Query: 331 KNKLR---IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 387
K +AP L V D I EEIFGP+ ++ V +++ I N L+A +
Sbjct: 351 KRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIV 410
Query: 388 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAY-HGKFSFDVFSHKK 446
T + K F V AG +++N + H +PFGG + S G G+ + + ++ K
Sbjct: 411 TTSLKHATHFKRRVEAGVVMVNLPTAGVDYH-VPFGGRKGSSYGPREQGEAALEFYTTIK 469
Query: 447 AV 448
V
Sbjct: 470 TV 471
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 157 bits (400), Expect = 6e-43
Identities = 99/331 (29%), Positives = 157/331 (47%), Gaps = 25/331 (7%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI 178
P GVV I PWN+P LL+ + A+ AGN +VLKPS P + L +L E + +
Sbjct: 114 PLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEVLPPGVL 173
Query: 179 RVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFD 235
VV G E L KI +TG++ + VMA+AAK L V LELGG +V
Sbjct: 174 NVVSGG-DELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLP 232
Query: 236 SGINLKVACRRMIMGKWGCNNGQACIS------PDHIITTKDYAPKLLESLKNELENFYG 289
+++ ++ G + N+GQ C + + I Y + E+L +
Sbjct: 233 -DVDIDAVAPKLFWGAFI-NSGQVCAAIKRLYVHESI-----YD-EFCEALVALAKAAVV 284
Query: 290 KNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPR 346
+ L+ L + N + ++ +L++D K G K++ GGE I PT++ D P
Sbjct: 285 GDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPE 344
Query: 347 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 406
S I+ EE FGP+LP+L ++ N L A +++++ + + + AG +
Sbjct: 345 GSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTV 404
Query: 407 VINDTAVHLAVH-SLPFGGVQESGMGAYHGK 436
IN H A+ PFGG ++SG+G G
Sbjct: 405 WINT---HGALDPDAPFGGHKQSGIGVEFGI 432
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 157 bits (398), Expect = 2e-42
Identities = 143/478 (29%), Positives = 224/478 (46%), Gaps = 47/478 (9%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYG-----WRVSQLKSLMKMLNEREPDIVDALRQDLDK 69
D +AA V+ R F K K + R L+++ + ER+ ++ D K
Sbjct: 46 DVDAA---VEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCGK 102
Query: 70 P--ELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSI----TTFPSSAEIVPEPFGVV 123
P E + +VA + L K K + TF ++ EP GVV
Sbjct: 103 PLDEAAWDMDDVAGCFEYYADLAEALD-----AKQKAPVSLPMETFKGY--VLKEPLGVV 155
Query: 124 LIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVE 182
+I+PWNYP L++ V A+AAG VLKPSE+A + LA + E + + VV
Sbjct: 156 GLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVT 215
Query: 183 GAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGIN 239
G E A L DKI +TG++ R +M AAA+ + PV LELGGKSP +VFD ++
Sbjct: 216 GLGTEAGAPLASHPGVDKIAFTGSTATGRKIMTAAAQMVKPVSLELGGKSPIIVFDD-VD 274
Query: 240 LKVACRRMIMGKW---GC--NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE 294
L A +W GC NGQ C + ++ + A + LE L +N +PLE
Sbjct: 275 LDKAV------EWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDPLE 328
Query: 295 SK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---IAPTLLLDVPRDSL 349
L +V+ + ++ K + K G I+ GG+R ++ + I PT++ DV
Sbjct: 329 EGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQ 388
Query: 350 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
I EE+FGP+L + T +++ ++ N LA + +N+ + ++ E AG + IN
Sbjct: 389 IWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWIN 448
Query: 410 DTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVR-YPPYTK 466
+ P+GG++ SG G G++ + + K V +I D P YPP +K
Sbjct: 449 CSQPCFC--QAPWGGIKRSGFGRELGEWGLENYLSVKQVTK--YISDEPWGWYPPPSK 502
|
Length = 503 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 155 bits (394), Expect = 4e-42
Identities = 93/343 (27%), Positives = 153/343 (44%), Gaps = 17/343 (4%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
EP+GVV I +N+P + + + +AAGN +V+KP E AP S+ LA+L E +
Sbjct: 115 EPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREVLPPGV 174
Query: 178 IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235
++ G A A L +I G+ R +M AAA+ + V LELGGK+ ++
Sbjct: 175 FNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVF 234
Query: 236 SGINLKVACRRMIMG---KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 292
+ + A + G W GQ+C S + + ++L + + +P
Sbjct: 235 PDADPEAAADAAVAGMNFTW---CGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDP 291
Query: 293 L-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKL-----RIAPTLLLDVP 345
+ + +V+ + R+ +D K G ++V GG R + + PT+ DV
Sbjct: 292 TDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVT 351
Query: 346 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 405
I EEIFGP+L +L + N L A ++TN+ + V AG
Sbjct: 352 PGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGY 411
Query: 406 LVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+ IN ++ H PFGGV+ SG+G ++ +K V
Sbjct: 412 VWINGSSRHFL--GAPFGGVKNSGIGREECLEELLSYTQEKNV 452
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 155 bits (393), Expect = 8e-42
Identities = 100/360 (27%), Positives = 171/360 (47%), Gaps = 41/360 (11%)
Query: 113 AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY 172
A I EP GVV + PWN+P L++ + A+AAGN++VLKP+E +P ++ LA+L E
Sbjct: 118 ALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALE- 176
Query: 173 MDLSSI-----RVVEGAVAET-SAL-LDQKWDKICYTGNSRVARIVMAAAAK-HLTPVLL 224
+ + VV G AL L D + +TG++ V R + + + +L V L
Sbjct: 177 ---AGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWL 233
Query: 225 ELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNE 283
E GGKSP +VF +L A G + N G+ C + ++ + + LE +
Sbjct: 234 ECGGKSPNIVFADAPDLDAAAEAAAAGIFW-NQGEVCSAGSRLLVHESIKDEFLEKVVAA 292
Query: 284 LENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---IAP 338
+ +PL+ + + +V+ HF ++ ++ K G ++V GG+R + + P
Sbjct: 293 AREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEP 352
Query: 339 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN-------- 390
T+ V D I EEIFGP+L ++T D E++ + N LAA ++T++
Sbjct: 353 TVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVA 412
Query: 391 KKLK--QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
++L+ +V G + + PFGG ++SG G + D ++ K
Sbjct: 413 RRLRAGTVWVNCFDEGDI------------TTPFGGFKQSGNGRDKSLHALDKYTELKTT 460
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 155 bits (393), Expect = 8e-42
Identities = 107/368 (29%), Positives = 180/368 (48%), Gaps = 16/368 (4%)
Query: 96 WMTPEKAKTSITTFPS------SAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNA 149
W T +T + PS +A EP GVV I PWN+ ++++ + A+A G
Sbjct: 113 WATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCT 172
Query: 150 LVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQ-KWDKICYTGNSRV 207
+V+KPSE P + +A+L E + + VV G A + L+ K+ +TG+
Sbjct: 173 IVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVAT 232
Query: 208 ARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 267
+ + AA LT V LELGGK+ F ++ ++ + + GQ C +P+
Sbjct: 233 GKKIGRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGF-LHQGQVCAAPERFY 291
Query: 268 TTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVH 325
+ +L+ LK L +F +P+ ES + N HF ++ LDD + G +IV
Sbjct: 292 VHRSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVR 351
Query: 326 GGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAA 384
GGE + PTL+L DS +M EE FGP++ + + E+ +IN L A
Sbjct: 352 GGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTA 411
Query: 385 YLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVH-SLPFGGVQESGMGAYHGKFSFDVFS 443
++TNN +++ + AG + +N +H + ++PFGG+++SG+G G D ++
Sbjct: 412 SVWTNNLSKALRYIPRIEAGTVWVN---MHTFLDPAVPFGGMKQSGIGREFGSAFIDDYT 468
Query: 444 HKKAVLSR 451
K+V+ R
Sbjct: 469 ELKSVMIR 476
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 154 bits (391), Expect = 1e-41
Identities = 107/345 (31%), Positives = 167/345 (48%), Gaps = 14/345 (4%)
Query: 115 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMD 174
++ EP GVV I PWN+PFL++ + A+AAGN +V+KPS S LAK++ + +
Sbjct: 132 VLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQDVLP 191
Query: 175 LSSIRVVEGAVAET-SALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 232
+ +V G +++ LL+ DK+ +TG++ V R V AAAK L P LELGGKS
Sbjct: 192 KGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLIPATLELGGKSAN 251
Query: 233 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 292
+ N A +G N GQ C + I + + + LK + EN NP
Sbjct: 252 IIFDDANWDKALEGAQLGIL-FNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNP 310
Query: 293 LE-SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER------DKNKLRIAPTLLLDV 344
L+ + VN + ++ +D K G KI+ GG R DK I PTL+++V
Sbjct: 311 LDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFF-IEPTLIVNV 369
Query: 345 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 404
D + EEIFGP+ ++ ++ D+ N L +FT + + V G
Sbjct: 370 TNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETG 429
Query: 405 GLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449
+ +N T + + PFGG ++SG+G K D ++ K +
Sbjct: 430 RVWVN-TYNQIPAGA-PFGGYKKSGIGRETHKSMLDAYTQMKNIY 472
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 154 bits (390), Expect = 1e-41
Identities = 91/351 (25%), Positives = 159/351 (45%), Gaps = 12/351 (3%)
Query: 94 KHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLK 153
+ + P + + +I + P GVV +ISPWNYP L++ + A+ AGNA+VLK
Sbjct: 94 ERLLKPRRRRGAIPVLTRTTVNR-RPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLK 152
Query: 154 PSEVAPASSSLLAKLV---GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARI 210
P ++ +L+ G DL + G+ A++D D + +TG++ R+
Sbjct: 153 PDSQTALTALWAVELLIEAGLPRDLWQVVTGPGSEV-GGAIVDNA-DYVMFTGSTATGRV 210
Query: 211 VMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 270
V A + L LELGGK+P++ +L A + + N GQ C+S + I +
Sbjct: 211 VAERAGRRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFS-NAGQLCVSIERIYVHE 269
Query: 271 DYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER 329
+ + L+ D+ +++ R++ +DD G V G R
Sbjct: 270 SVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGR 329
Query: 330 ---DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 386
D PT+L V D + +EE FGP++ I V +++ ++ N L A +
Sbjct: 330 ARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASV 389
Query: 387 FTNNKKLKQQFVETVSAGGLVINDT-AVHLAVHSLPFGGVQESGMGAYHGK 436
+T + ++ + AG + +N+ A A P GG+++SG+G HG
Sbjct: 390 WTRDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGA 440
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 151 bits (382), Expect = 1e-40
Identities = 115/431 (26%), Positives = 194/431 (45%), Gaps = 34/431 (7%)
Query: 29 TFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKS 88
F + + + R S L+ ++ E + D+ + + KP L+ + E+ + ++
Sbjct: 31 AFKTWRATTAKERSSLLRKWYNLMMENKDDLARLITLENGKP-LKEAKGEILYAASFLE- 88
Query: 89 ALKELKHWMTPEKAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFLLSLDPVVGA 143
W E + T PS ++ +P GV I+PWN+P + A
Sbjct: 89 -------WFAEEAKRVYGDTIPSPQSDKRLIVIKQPVGVCAAITPWNFPAAMITRKAGAA 141
Query: 144 IAAGNALVLKPSEVAPASSSLLAKLV-------GEYMDLSSIRVVE-GAVAETSALLDQK 195
+AAG +V+KP+E P S+ LA+L G ++ R E G V TS L+
Sbjct: 142 LAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNVITGSRAKEVGNVLTTSPLVR-- 199
Query: 196 WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGC 254
KI +TG++ V +I+M +A + V +ELGG +P +VFD +L A + K+
Sbjct: 200 --KISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFDDA-DLDQAVEGAMASKFR- 255
Query: 255 NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKL 313
N GQ C+ + + + + L ++ N L+ ++N ++ K
Sbjct: 256 NAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKH 315
Query: 314 LDDDKVSG-KIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 371
+ D G K+V GG+R + PT+L +V D L+ EE FGPL P+ D E+
Sbjct: 316 IADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADMLVSKEETFGPLAPVFKFDDEEEV 375
Query: 372 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 431
I N LAAY F+ + + E + G + IN + + PFGGV++SG+G
Sbjct: 376 IAIANDTEVGLAAYFFSRDLSRIWRVAEALEYGMVGINTGLI--SNVVAPFGGVKQSGLG 433
Query: 432 AYHGKFSFDVF 442
K+ + +
Sbjct: 434 REGSKYGIEEY 444
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 151 bits (384), Expect = 2e-40
Identities = 103/348 (29%), Positives = 171/348 (49%), Gaps = 17/348 (4%)
Query: 115 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMD 174
V EP GV +I+PWNYP L + + A+AAGN +V+KPSEV P ++ L +L+ E
Sbjct: 130 TVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIEE-AG 188
Query: 175 L--SSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKS 230
L + +V G+ A A L D + +TG + R +M AAA ++ V LELGGK+
Sbjct: 189 LPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKKVALELGGKN 248
Query: 231 P-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG 289
P +VF + + A + + G + N GQ C + ++ + K + +L +
Sbjct: 249 PNIVFADA-DFETAVDQALNGVF-FNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKL 306
Query: 290 KNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLR----IAPTLLL 342
N L ++ +V++ H ++ + K G ++V GG+R ++L + PT+
Sbjct: 307 GNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFD 366
Query: 343 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 402
DV R I+ EEIFGP+L + D E++ + N LA ++T + + +
Sbjct: 367 DVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLR 426
Query: 403 AGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 450
AG + IND H P+GG ++SG+G G + + K +
Sbjct: 427 AGTVWIND--YHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHINI 472
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 150 bits (380), Expect = 4e-40
Identities = 131/448 (29%), Positives = 197/448 (43%), Gaps = 24/448 (5%)
Query: 15 DAEAASLFVKELRGTFASGK-TKSYGWRVSQLKSLMKMLNEREPDIVDALRQ-DLDKPEL 72
DAE VK R F G + G+ S++ L E+ D + AL D KP
Sbjct: 39 DAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHADELAALETWDNGKPYE 98
Query: 73 ESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYP 132
++ EV L + W T P + EP GVV I PWN+P
Sbjct: 99 QARYAEVPLAA----RLFRYYAGWADKIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFP 154
Query: 133 FLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSAL 191
L+ V A+A GN +VLKP+E P S+ L AKL E + + +V G A
Sbjct: 155 LLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAA 214
Query: 192 LDQKW--DKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSP-VVF-DSGINLKVACRR 246
+ DK+ +TG++ V +I+M AAK +L PV LELGGKSP +V D+ ++ V
Sbjct: 215 IASHMDVDKVAFTGSTEVGKIIMQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAH 274
Query: 247 MIMGKWGC--NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVN 303
N GQ C + + + +E K +P + V+
Sbjct: 275 F-----ALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQVD 329
Query: 304 SNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLP 361
F ++ ++ K G ++ GG+R +K I PT+ DV D I +EIFGP+
Sbjct: 330 KEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQS 389
Query: 362 ILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP 421
IL +++ N+ LAA +F+ N + AG + +N V A S+P
Sbjct: 390 ILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDA--SIP 447
Query: 422 FGGVQESGMGAYHGKFSFDVFSHKKAVL 449
FGG + SG+G G ++ + + KAV+
Sbjct: 448 FGGYKMSGIGREKGIYALNNYLQVKAVV 475
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 149 bits (378), Expect = 7e-40
Identities = 107/462 (23%), Positives = 193/462 (41%), Gaps = 46/462 (9%)
Query: 13 VFDAEAASLFVKELRGTFASGKTKSYGW-------RVSQLKSLMKMLNEREPDIVDALRQ 65
+ + ASL +R + GW R + + +++L +I + L
Sbjct: 9 IAERPLASLE--AVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTW 66
Query: 66 DLDKPELESSIYEVALLKTSIKSALKELKHWM--TPEKAKTSITTFPSSAE--IVPEPFG 121
+ +P +A I+ L+ ++ + E E I EP G
Sbjct: 67 QMGRP--------IAQAGGEIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLG 118
Query: 122 VVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL---VGEYMDLSSI 178
VVLII+PWNYP+L +++ V+ A+ AGNA++LK S P A G +
Sbjct: 119 VVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGV--F 176
Query: 179 RVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237
+V+ + ++AL+ D + +TG+ R + AAA V LELGGK P
Sbjct: 177 QVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPD 236
Query: 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK- 296
+L A ++ G + N+GQ+C S + I + +E+ ++ + +PL+
Sbjct: 237 ADLDAAAESLVDGAF-FNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPST 295
Query: 297 DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR-----IAPTLLLDVPRDSLIM 351
L +V++ + + D G + + +APT+L +V +M
Sbjct: 296 TLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVM 355
Query: 352 SEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN-- 409
EE FGP++ I+ V ++ ++N L A ++T + + E + G + +N
Sbjct: 356 REETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRC 415
Query: 410 ---DTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
D A L + GV++SG G + +D + K+
Sbjct: 416 DYLDPA-------LAWTGVKDSGRGVTLSRLGYDQLTRPKSY 450
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 148 bits (375), Expect = 5e-39
Identities = 82/330 (24%), Positives = 147/330 (44%), Gaps = 18/330 (5%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
P GV +ISPWN+P + A+ GN +VLKP+E P ++ L +++ E +
Sbjct: 165 RPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPG 224
Query: 177 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAK------HLTPVLLELGG 228
+ + G E L I +TG+ V + AAK L V+ E+GG
Sbjct: 225 VVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGG 284
Query: 229 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFY 288
K+ ++ D +L A ++ +G GQ C + +I + + LE L +
Sbjct: 285 KNAIIVDEDADLDEAAEGIVRSAFGFQ-GQKCSACSRVIVHESVYDEFLERLVERTKALK 343
Query: 289 GKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR---IAPTLLLDV 344
+P + + + +++ R+ + ++ K G+++ GGE + + PT+ DV
Sbjct: 344 VGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEGRLLLGGEVLELAAEGYFVQPTIFADV 403
Query: 345 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 404
P D + EEIFGP+L ++ +++ +I N L +F+ + + ++ G
Sbjct: 404 PPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVG 463
Query: 405 GLVIND--TAVHLAVHSLPFGGVQESGMGA 432
L N T + PFGG + SG G+
Sbjct: 464 NLYANRKITGALVGRQ--PFGGFKMSGTGS 491
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 145 bits (368), Expect = 3e-38
Identities = 100/340 (29%), Positives = 160/340 (47%), Gaps = 14/340 (4%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
EP GV I PWN+P L++ + A+A GN +VLKP+E P ++ LA L+ E
Sbjct: 144 EPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPG 203
Query: 177 SIRVVEGAVAETSALLD--QKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVV 233
+ VV G A + DK+ +TG++ V +++ AA K +L V LELGGKSP +
Sbjct: 204 VVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLELGGKSPNI 263
Query: 234 FDSGINLKVACRRMIMGKWGC--NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN 291
+ +L A N GQ C + + + ++ + N
Sbjct: 264 VFADADLDYAVE---QAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGN 320
Query: 292 PLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDS 348
P + K + ++ F ++ +L++ K G K+ GG+R +K I PT+ DV D
Sbjct: 321 PFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDM 380
Query: 349 LIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVI 408
I EEIFGP+ I I++ + N+ T LAA +FT + F + AG + +
Sbjct: 381 RIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWV 440
Query: 409 NDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
N ++ + PFGG + SG G G++ ++ K V
Sbjct: 441 N-CYNVVSPQA-PFGGYKMSGNGRELGEYGLQEYTEVKTV 478
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 144 bits (366), Expect = 4e-38
Identities = 110/431 (25%), Positives = 192/431 (44%), Gaps = 32/431 (7%)
Query: 34 KTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKEL 93
T R+ L +L E + ++ + L ++ K L+ ++ EV I+ ++EL
Sbjct: 56 PTMPLEERIDCLHKFADLLKENKEEVANLLMWEIGKT-LKDALKEVDRTIDYIRDTIEEL 114
Query: 94 KHWMTP-------EKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAA 146
K K I A++ EP GVVL I P+NYP L++ ++ A+
Sbjct: 115 KRLDGDSLPGDWFPGTKGKI------AQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIM 168
Query: 147 GNALVLKPSEVAPASSSLLAKLVGEYMDLSS-----IRVVEGAVAETSALL--DQKWDKI 199
GN +V KP LL + E + + VV G E L + D I
Sbjct: 169 GNTVVFKP----ATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVI 224
Query: 200 CYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQA 259
+TG++ V + ++LELGGK P + +L++A + ++ G +GQ
Sbjct: 225 SFTGSTEVGNRLKKQHPM--KRLVLELGGKDPAIVLPDADLELAAKEIVKGALS-YSGQR 281
Query: 260 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK 318
C + ++ + A +L+E LK E+ P + D++ +++ + L+DD
Sbjct: 282 CTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAV 341
Query: 319 VSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS 377
G +++GG R+ L I PTLL V D + EE FGP+LPI+ V+ IE++ ++ N
Sbjct: 342 AKGATVLNGGGREGGNL-IYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANK 400
Query: 378 GTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKF 437
L A +FT + ++ + + G + IN PF G ++SG+G
Sbjct: 401 SNYGLQASIFTKDINKARKLADALEVGTVNINSKCQR-GPDHFPFLGRKDSGIGTQGIGD 459
Query: 438 SFDVFSHKKAV 448
+ + +K +
Sbjct: 460 ALRSMTRRKGI 470
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 142 bits (361), Expect = 7e-38
Identities = 92/298 (30%), Positives = 148/298 (49%), Gaps = 20/298 (6%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS- 177
GV I PWN+PF L + A+ GN +V+KPSE P ++ AK+V E + L
Sbjct: 71 ALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDE-IGLPKG 129
Query: 178 -IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP--V 232
+V G L + K + TG+ +MAAAAK++T V LELGGK+P V
Sbjct: 130 VFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAKNITKVCLELGGKAPAIV 189
Query: 233 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 292
+ D+ ++L V + I+ N+GQ C + + K + + L ++ NP
Sbjct: 190 MDDADLDLAV---KAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNP 246
Query: 293 LESKDLSR--IVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDS 348
E D++ ++N+ R+ + + G ++ GG+ + K PTLLLDV ++
Sbjct: 247 AERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEM 306
Query: 349 LIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN-----KKLKQ-QFVET 400
IM EE FGP+LP++ D +E++ + N L + ++T N K +K +F ET
Sbjct: 307 SIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGET 364
|
Length = 409 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 143 bits (362), Expect = 2e-37
Identities = 96/346 (27%), Positives = 153/346 (44%), Gaps = 39/346 (11%)
Query: 107 TTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLA 166
+ + EP GVV I PWN P L+ + A+AAG +VLKPS P + LLA
Sbjct: 125 GSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLA 184
Query: 167 KLVGEYMDLSSIRVVEGAV------AETSALL--DQKWDKICYTGNSRVARIVMAAAAKH 218
+ E + G V E L DK+ +TG++ R + A +
Sbjct: 185 EAAEE------AGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGER 238
Query: 219 LTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLL 277
L V LELGGKS +V D +L A ++ NNGQ C++ I+ + +++
Sbjct: 239 LARVTLELGGKSAAIVLDDA-DLDAAVPGLVPASLM-NNGQVCVALTRILVPRSRYDEVV 296
Query: 278 ESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR 335
E+L + +PL+ + + + ++ R+ + + G ++V GG R R
Sbjct: 297 EALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDR 356
Query: 336 ---IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392
+ PTL DV D I EEIFGP+L ++ D +D+ I N L+ ++T +
Sbjct: 357 GWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTAD-- 414
Query: 393 LKQQFVET-------VSAGGLVINDTAVHLAVHSLPFGGVQESGMG 431
VE + G + +N + PFGG ++SG+G
Sbjct: 415 -----VERGLAVARRIRTGTVGVNGFRLDFG---APFGGFKQSGIG 452
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 142 bits (360), Expect = 2e-37
Identities = 94/321 (29%), Positives = 166/321 (51%), Gaps = 18/321 (5%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 177
P G V I+P+N+P L V AIAAG VLKP+ P S+ +L +++ E + +
Sbjct: 123 PIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPKGA 182
Query: 178 IRVVEGAVAETSALL-DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236
V+ + + L+ D++ + +TG+ V + A A K V+LELGG + V+ DS
Sbjct: 183 FSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGKK--KVVLELGGNAAVIVDS 240
Query: 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK----NP 292
+L A +R+I G + GQ+CIS ++ + + + K+ L +P
Sbjct: 241 DADLDFAAQRIIFGAFY-QAGQSCISVQRVLVHRS----VYDEFKSRLVARVKALKTGDP 295
Query: 293 LESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLI 350
+ D+ +++ + R+ +++ +G K++ GG+RD L PT+L DVP D +
Sbjct: 296 KDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKRDGALL--EPTILEDVPPDMEV 353
Query: 351 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 410
EE+FGP++ + D +++ +N L A +FT + + + + + GG+VIND
Sbjct: 354 NCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVIND 413
Query: 411 TAVHLAVHSLPFGGVQESGMG 431
V +P+GGV++SG+G
Sbjct: 414 VPT-FRVDHMPYGGVKDSGIG 433
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 141 bits (356), Expect = 1e-36
Identities = 102/348 (29%), Positives = 177/348 (50%), Gaps = 22/348 (6%)
Query: 116 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS---SLLAKLVGEY 172
+ EP GVV I PWN+P + V A+AAG +V+KP+E P S+ + LAKL G
Sbjct: 155 LKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAG-- 212
Query: 173 MDLSSIRVVEG----AVAETSALLDQKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELG 227
+ I VV G A A ++ +D DK+ +TG++ V R +M AAA +L V LELG
Sbjct: 213 VPDGVINVVTGFGPTAGAAIASHMDV--DKVSFTGSTEVGRKIMQAAATSNLKQVSLELG 270
Query: 228 GKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN 286
GKSP+ +FD ++ +A ++G + N G+ C++ + + + ++ L + ++
Sbjct: 271 GKSPLLIFDDA-DVDMAVDLALLGIF-YNKGEICVASSRVYVQEGIYDEFVKKLVEKAKD 328
Query: 287 FYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLD 343
+ +P + + V+ F ++ ++ K G ++ GG+ +K I PT+ D
Sbjct: 329 WVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTD 388
Query: 344 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 403
V D I +EIFGP++ ++ +E++ N+ LAA + T + + ++ A
Sbjct: 389 VTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRA 448
Query: 404 GGLVINDTAVHLAVHS-LPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 450
G + +N + A PFGG + SG G G + D + K+V++
Sbjct: 449 GTIWVN---CYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVT 493
|
Length = 501 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 140 bits (354), Expect = 2e-36
Identities = 95/408 (23%), Positives = 177/408 (43%), Gaps = 17/408 (4%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R L +L R +++ L ++ K +E+ I +VA I+ + P
Sbjct: 79 RARLLLKAADLLRRRRRELIATLTYEVGKNWVEA-IDDVAEAIDFIRYYARAALRLRYPA 137
Query: 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160
E G ++ISPWN+P + +V +A GN ++ KP+E A
Sbjct: 138 VEVVPYP--GEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVV 195
Query: 161 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAK 217
+ ++ E ++ + G E A L ++ I +TG+ + + AAA+
Sbjct: 196 VGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAAR 255
Query: 218 HLT------PVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 271
+ +E GGK+ ++ D + ++ +++ +G GQ C + +I T+
Sbjct: 256 LAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFG-FQGQKCSAASRLILTQG 314
Query: 272 YAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD 330
+LE L E P E+ DL ++++ A++ ++ K G++V GG+R
Sbjct: 315 AYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEGQLVLGGKRL 374
Query: 331 K-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTKPLAAYLF 387
+ +APT++ +VP + I EEIFGP+L ++ D ++ ++ NS L ++
Sbjct: 375 EGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVY 434
Query: 388 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG 435
+ ++ ++ G L IN V PFGG + SG A G
Sbjct: 435 SRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTG 482
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 140 bits (355), Expect = 3e-36
Identities = 92/331 (27%), Positives = 154/331 (46%), Gaps = 23/331 (6%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV---GEYMDL 175
P GVV +ISPWNYP L++ + A+ AGNA+VLKP P ++ +L+ G DL
Sbjct: 154 PKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDL 213
Query: 176 SSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235
+ G V T AL+D D + +TG++ R++ A + L LELGGK+P++
Sbjct: 214 WQVVTGPGPVVGT-ALVDNA-DYLMFTGSTATGRVLAEQAGRRLIGFSLELGGKNPMIVL 271
Query: 236 SGINLKVACRRMIMGKWGC--NNGQACISPDHIITTKDYAPKLLESLKNELENF-----Y 288
+L A + C N GQ CIS + I + + + + + Y
Sbjct: 272 DDADLDKAAAGAVR---ACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGY 328
Query: 289 GKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER--DKNKLRIAPTLLLDVP 345
+ D+ +++ +S +DD G ++ GG+ D L PT+L V
Sbjct: 329 DYSA----DMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVT 384
Query: 346 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 405
D + EE FGP++ + V ++++ + N L A ++T + + + AG
Sbjct: 385 PDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIAARIRAGT 444
Query: 406 LVINDT-AVHLAVHSLPFGGVQESGMGAYHG 435
+ +N+ A P GG+++SG+G HG
Sbjct: 445 VNVNEGYAAAWGSVDAPMGGMKDSGLGRRHG 475
|
Length = 524 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 139 bits (352), Expect = 4e-36
Identities = 95/338 (28%), Positives = 157/338 (46%), Gaps = 21/338 (6%)
Query: 110 PSSAEIVP--------EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161
++ E + +P GVV I+PWNYP +++ + A+AAGN +VLKPSE+ P +
Sbjct: 121 KAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLT 180
Query: 162 SSLLAKLVGEYMDLSSIRVVEGAVAET-SALLDQ-KWDKICYTGNSRVARIVMAAAAKHL 219
+ LA+L + + + VV G A AL+ K + TG+ + V++AAA +
Sbjct: 181 ALKLAELAADILPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADSV 240
Query: 220 TPVLLELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLE 278
LELGGK+PV VFD +L + + N GQ C + I + L+
Sbjct: 241 KRTHLELGGKAPVIVFDDA-DLDAVVEGIRTFGY-YNAGQDCTAACRIYAQRGIYDDLVA 298
Query: 279 SLKNELENF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG--KIVHGGER-DKNKL 334
L + G E +L ++++ H R++ ++ K G ++V GGE D
Sbjct: 299 KLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGY 358
Query: 335 RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394
PTLL +D I+ E+FGP++ + D + + N LA+ ++T +
Sbjct: 359 YYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRA 418
Query: 395 QQFVETVSAGGLVINDTAVHL-AVHSLPFGGVQESGMG 431
+ + G +N H V +P GG ++SG G
Sbjct: 419 HRVSARLQYGCTWVNT---HFMLVSEMPHGGQKQSGYG 453
|
Length = 475 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 1e-35
Identities = 94/326 (28%), Positives = 163/326 (50%), Gaps = 13/326 (3%)
Query: 116 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MD 174
+ EP GVVL I+P+N+P + AIAA N +VLKPSE P S+ LA L+ E +
Sbjct: 117 LREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLP 176
Query: 175 LSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSP 231
+ VV G E L D + +TG V + + A A K LLELGG P
Sbjct: 177 PDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAGYKRQ---LLELGGNDP 233
Query: 232 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN 291
++ +L+ A + G + N+GQ C + I+ + A + ++ L + +
Sbjct: 234 LIVMDDADLERAATLAVAGSYA-NSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGD 292
Query: 292 PL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSL 349
P+ + D+ +++ ++ +++ G +++ G +R APT+L VP D+
Sbjct: 293 PMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQGALY--APTVLDHVPPDAE 350
Query: 350 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
+++EE FGP+ P++ V ++++ I NS L++ + TN+ ++ VE + G + +N
Sbjct: 351 LVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVN 410
Query: 410 DTAVHLAVHSLPFGGVQESGMGAYHG 435
+ PFGGV++SG+G G
Sbjct: 411 EVP-GFRSELSPFGGVKDSGLGGKEG 435
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 137 bits (347), Expect = 2e-35
Identities = 98/348 (28%), Positives = 162/348 (46%), Gaps = 20/348 (5%)
Query: 117 PEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLS 176
EP GVV I PWN+P L++ + A+AAGN +VLKP+E PAS +L +L+G+ +
Sbjct: 134 HEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDLLPPG 193
Query: 177 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VV 233
+ VV G E L ++ K+ +TG + R++M A++++ PV LELGGKSP +
Sbjct: 194 VVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENIIPVTLELGGKSPNIF 253
Query: 234 FDSGIN-----LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFY 288
F ++ A +M + N G+ C P + + + +E ++
Sbjct: 254 FADVMDADDAFFDKALEGFVM--FALNQGEVCTCPSRALIQESIYDRFMERALERVKAIK 311
Query: 289 GKNPLESKD-LSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-----DKNKLRIAPTLL 341
NPL+++ + + ++ +D K G +++ GGER PT
Sbjct: 312 QGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTF 371
Query: 342 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV 401
I EEIFGP+L + T E++ +I N L A ++T + + +
Sbjct: 372 KG-GNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGI 430
Query: 402 SAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449
AG + N HL FGG ++SG+G + K D + K +L
Sbjct: 431 QAGRVWTN--CYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNLL 476
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 9e-35
Identities = 84/354 (23%), Positives = 159/354 (44%), Gaps = 37/354 (10%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS- 177
P GVV +I+ +N+P + A+ GN +V KPSE P ++ + K++ E ++ +
Sbjct: 133 PLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGL 192
Query: 178 ----IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 231
+ +V G + LL D + + +TG++ V R V A+ VLLELGG +
Sbjct: 193 PPGVVNLVTGG-GDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRFGRVLLELGGNNA 251
Query: 232 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKN--------- 282
++ +L +A R ++ G GQ C + +I + + LE L
Sbjct: 252 IIVMDDADLDLAVRAVLFAAVG-TAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGD 310
Query: 283 --ELENFYGKNPLESKD-LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR---I 336
+ G PL ++ + + +N+ A+ G ++ GG+R +
Sbjct: 311 PLDEGTLVG--PLINQAAVEKYLNAIEIAK--------SQGGTVLTGGKRIDGGEPGNYV 360
Query: 337 APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396
PT++ V D+ I+ EE F P+L ++ D +E++ I N + L++ +FT + + +
Sbjct: 361 EPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFR 420
Query: 397 FVE-TVSAGGLV-INDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
++ S G+V +N + FGG +E+G G G ++ + +
Sbjct: 421 WLGPKGSDCGIVNVNIPTSGAEIG-GAFGGEKETGGGRESGSDAWKQYMRRSTC 473
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 134 bits (339), Expect = 2e-34
Identities = 105/327 (32%), Positives = 168/327 (51%), Gaps = 12/327 (3%)
Query: 117 PEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLS 176
+P GVV I PWN+P L+ + A+A GN +VLKP+E P ++ L A++ E L
Sbjct: 145 WKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAE-AGLP 203
Query: 177 S--IRVVEGAVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-V 232
+ +V G + SAL + DK+ +TG++ V R + A A + LELGGKSP +
Sbjct: 204 PGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGTGKKLSLELGGKSPFI 263
Query: 233 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 292
VFD +L A ++ W N GQ C + ++ + A +L+ LK + + +P
Sbjct: 264 VFDDA-DLDSAVEGIVDAIW-FNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDP 321
Query: 293 LE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVH--GGERDKNKLRIAPTLLLDVPRDSL 349
L+ + D+ IV+ R+ +L+++ + G V G + PTL +VP S
Sbjct: 322 LDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASR 381
Query: 350 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
I EEIFGP+L +LT +++ + N+ LAA +++ N L + ++ AG + IN
Sbjct: 382 IAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWIN 441
Query: 410 DTAVHLAVHSLPFGGVQESGMGAYHGK 436
+ A + FGG +ESG G GK
Sbjct: 442 GHNLFDA--AAGFGGYRESGFGREGGK 466
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 133 bits (337), Expect = 5e-34
Identities = 103/348 (29%), Positives = 161/348 (46%), Gaps = 19/348 (5%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
+P GVV I+P+N+P ++ L AIA GN VLKPSE P ++ LA+L+ E L
Sbjct: 135 QPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQE-AGLPD 193
Query: 178 --IRVVEGAVAETSALLDQKWDK-ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 234
+ VV G +ALLD K + + G++ V + AA + V G K+ V
Sbjct: 194 GVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKRVQALGGAKNHAVV 253
Query: 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE 294
+L+ ++ +G GQ C++ + D A + + L + +
Sbjct: 254 MPDADLEQTANALVGAAFGAA-GQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDD 312
Query: 295 SK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD------KNKLRIAPTLLLDVPR 346
D+ +++ R+ L++ G K+V G R +N + PT+L +V
Sbjct: 313 PGADMGPVISPAAKERIEGLIESGVEEGAKLVLDG-RGVKVPGYENGNFVGPTILDNVTP 371
Query: 347 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 406
D I EEIFGP+L I+ VD ++++ IIN+ A +FT + ++F V AG +
Sbjct: 372 DMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMV 431
Query: 407 VIN-DTAVHLAVHSLPFGGVQESGMGAYH--GKFSFDVFSHKKAVLSR 451
IN V LA S FGG + S G H GK ++ K V SR
Sbjct: 432 GINVPIPVPLAFFS--FGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSR 477
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 133 bits (336), Expect = 7e-34
Identities = 88/328 (26%), Positives = 154/328 (46%), Gaps = 12/328 (3%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 177
P GV ++ISPWN+PF + + V I GN +VLKP+E AP ++ +++ E +
Sbjct: 167 PTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVIAAKFVEILEEAGLPKGV 226
Query: 178 IRVVEGAVAET-SALLDQ-KWDKICYTGNSRVARIVMAAAAK------HLTPVLLELGGK 229
++ V G+ +E L+D K I +TG+ V + AAK HL V+ E+GGK
Sbjct: 227 VQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPGQKHLKRVIAEMGGK 286
Query: 230 SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF-Y 288
V+ D ++++A + +G GQ C + + + +++E E+
Sbjct: 287 DTVIVDEDADIELAAQSAFTSAFGFA-GQKCSAGSRAVVHEKVYDEVVERFVEITESLKV 345
Query: 289 GKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRD 347
G + +++ F ++ + ++ K G++V GG D +K I PT+ DV R
Sbjct: 346 GPPDSADVYVGPVIDQKSFNKIMEYIEIGKAEGRLVSGGCGDDSKGYFIGPTIFADVDRK 405
Query: 348 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 407
+ + EEIFGP++ + +++ +I N+ L + +NN+ + G L
Sbjct: 406 ARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNNRDHINRAKAEFEVGNLY 465
Query: 408 INDTAVHLAVHSLPFGGVQESGMGAYHG 435
N V PFGG + SG + G
Sbjct: 466 FNRNITGAIVGYQPFGGFKMSGTDSKAG 493
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 132 bits (333), Expect = 1e-33
Identities = 97/353 (27%), Positives = 166/353 (47%), Gaps = 22/353 (6%)
Query: 110 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV 169
P+ + E GVV I+PWN+P ++L + A+AAGN +VLKP+ P +++L +L+
Sbjct: 132 PTRRTLRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPAPDTPWCAAVLGELI 191
Query: 170 GEYMDLSS--IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLE 225
E+ D + +V + ALL D + D + +TG++ R VMA AA L V LE
Sbjct: 192 AEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVMADAAATLKKVFLE 251
Query: 226 LGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPK-----LLESL 280
LGGKS + +L AC M + GQ C ITT+ P+ + +
Sbjct: 252 LGGKSAFIVLDDADLAAAC-SMAAFTVCMHAGQGC-----AITTRLVVPRARYDEAVAAA 305
Query: 281 KNELENFYGKNPLESKDL-SRIVNSNHFARLSKLLD-DDKVSGKIVHGGERDKNKLR--- 335
+ + +P + + ++++ R+ LD G+ GG R ++ R
Sbjct: 306 AATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGGGRPADRDRGFF 365
Query: 336 IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395
+ PT++ + ++ + EEIFGP+L ++ D +D+ I N L+ +F + +
Sbjct: 366 VEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYGLSGTVFGADPERAA 425
Query: 396 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
V G + +N + A PFGG ++SG+G G F+ + K +
Sbjct: 426 AVAARVRTGTVNVNGGVWYSA--DAPFGGYKQSGIGREMGVAGFEEYLETKLI 476
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 4e-33
Identities = 91/324 (28%), Positives = 154/324 (47%), Gaps = 15/324 (4%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
P GV ++ISPWN+PF + + AI AGN ++LKP+ P ++ +++ E +
Sbjct: 170 IPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAG 229
Query: 177 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAK------HLTPVLLELGG 228
+ V G+ +E L K I +TG+ V + AAK L V+ E+GG
Sbjct: 230 VVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQIWLKRVIAEMGG 289
Query: 229 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFY 288
K +V D +L +A ++ +G + GQ C + I +D ++LE + +
Sbjct: 290 KDAIVVDEDADLDLAAESIVASAFGFS-GQKCSACSRAIVHEDVYDEVLEKVVELTKELT 348
Query: 289 GKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRD 347
NP ++ + ++N F ++ ++ K G++V GGE D +K I PT+ DV
Sbjct: 349 VGNPEDNAYMGPVINQASFDKIMSYIEIGKEEGRLVLGGEGDDSKGYFIQPTIFADVDPK 408
Query: 348 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 407
+ IM EEIFGP++ + + + +I N+ L + +NN++ ++ G L
Sbjct: 409 ARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLY 468
Query: 408 IND--TAVHLAVHSLPFGGVQESG 429
N T + H PFGG SG
Sbjct: 469 FNRGCTGAIVGYH--PFGGFNMSG 490
|
Length = 514 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 6e-32
Identities = 98/342 (28%), Positives = 170/342 (49%), Gaps = 9/342 (2%)
Query: 113 AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY 172
A IV EP GV+ I PWN+P LL+ + A+AAGN+++LKPSE +P S+ LA L E
Sbjct: 151 AMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEA 210
Query: 173 -MDLSSIRVVEGAVAET-SAL-LDQKWDKICYTGNSRVARIVMA-AAAKHLTPVLLELGG 228
+ + VV G E AL D I +TG++R + ++ A ++ V LE GG
Sbjct: 211 GLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGG 270
Query: 229 KSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF 287
KS +VF +L+ A G + N GQ CI+ ++ + A + L LK + +N+
Sbjct: 271 KSANIVFADCPDLQQAASATAAGIF-YNQGQVCIAGTRLLLEESIADEFLALLKQQAQNW 329
Query: 288 YGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPR 346
+PL+ + + +++ H + + + + G+++ G I PT+ +DV
Sbjct: 330 QPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAGLAAAIGPTIFVDVDP 389
Query: 347 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 406
++ + EEIFGP+L + E + + N L A ++T + + + AG +
Sbjct: 390 NASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSV 449
Query: 407 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+N+ + ++PFGG ++SG G + + F+ K +
Sbjct: 450 FVNN--YNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTI 489
|
Length = 494 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 9e-32
Identities = 106/350 (30%), Positives = 166/350 (47%), Gaps = 14/350 (4%)
Query: 110 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV 169
P + + EP GV I PWN+P L+ V A+A GN +VLK +E P S+ AKL+
Sbjct: 186 PHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLL 245
Query: 170 GEY-MDLSSIRVVEGAVAETSALLDQKW--DKICYTGNSRVARIVMAAAAK-HLTPVLLE 225
E + + VV G A L DK+ +TG++ +IV+ AAK +L PV LE
Sbjct: 246 HEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLE 305
Query: 226 LGGKSPVVF--DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLK-N 282
LGGKSP + D+ ++ V + N GQ C + + + +E K
Sbjct: 306 LGGKSPFIVCEDADVDKAVELAHFAL---FFNQGQCCCAGSRTFVHERVYDEFVEKAKAR 362
Query: 283 ELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTL 340
L+ G + + ++S F ++ + + SG + GG+R +K I PT+
Sbjct: 363 ALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTV 422
Query: 341 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 400
+V D LI +EIFGP+ IL +++ N+ LAA +FT N
Sbjct: 423 FSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRA 482
Query: 401 VSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 450
+ G + +N V A ++PFGG + SG+G G +S + + KAV++
Sbjct: 483 LRVGTVWVNCFDVFDA--AIPFGGYKMSGIGREKGIYSLNNYLQVKAVVT 530
|
Length = 538 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 1e-31
Identities = 103/425 (24%), Positives = 191/425 (44%), Gaps = 32/425 (7%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIK----SALKELKHW 96
R L L + L + K E+ +E++ + ++ A E
Sbjct: 44 RARVLLELADAFEANAERLARLLALENGKILGEAR-FEISGAISELRYYAGLARTEAGRM 102
Query: 97 MTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSE 156
+ PE S+ ++ EP GV II PWN P +L + + A+AAG +V+KP+
Sbjct: 103 IEPEPGSFSL--------VLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAG 154
Query: 157 VAPASSSLLAKLVGEYMDLSS--IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVM 212
++ + +++ E L + + + + +E +A L D I +TG++ R +M
Sbjct: 155 QTAQINAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIM 214
Query: 213 AAAAKHLTPVLLELGGKSP-VVF-DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 270
AAAA L + LELGGK+P +VF D+ ++ + + GQ C++ ++ +
Sbjct: 215 AAAAPTLKRLGLELGGKTPCIVFDDADLDAALP---KLERALTIFAGQFCMAGSRVLVQR 271
Query: 271 DYAPKLLESLKNELENF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 328
A ++ + L L G + D+ +++ + R+ ++++ +G ++V G
Sbjct: 272 SIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGG 331
Query: 329 RDKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAA 384
L + PTLL D+ I+ EEIFGP+L + T D ++ + N LAA
Sbjct: 332 PVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAA 391
Query: 385 YLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHS-LPFGGVQESGMGAYHGKFSFDVFS 443
++T + + + AG + IND + + GG ++SG+G HG + + F
Sbjct: 392 SVWTRDLARAMRVARAIRAGTVWIND---WNKLFAEAEEGGYRQSGLGRLHGVAALEDFI 448
Query: 444 HKKAV 448
K +
Sbjct: 449 EYKHI 453
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 124 bits (315), Expect = 5e-31
Identities = 103/349 (29%), Positives = 165/349 (47%), Gaps = 28/349 (8%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
EP GV I WNYP ++ A+AAGNA++ KPSEV P ++ LA++ E +
Sbjct: 141 EPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDG 200
Query: 177 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VV 233
VV+G A L + D K+ +TG + VMAAAA L V +ELGGKSP +V
Sbjct: 201 VFNVVQGD-GRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAASLKEVTMELGGKSPLIV 259
Query: 234 FDSGINLKVACRRMIMGKWGCN---NGQACISPDHIITTKDYAPKLLESLKNELENFYGK 290
FD +L A ++ N +GQ C + + K L +E
Sbjct: 260 FDDA-DLDRAADIAMLA----NFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIG 314
Query: 291 NPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR-----IAPTLLLD 343
+P+ + + +V+ H ++ ++ K G +++ GGER +APT+ D
Sbjct: 315 DPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTD 374
Query: 344 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 403
D I+ EEIFGP++ +LT D ++ N LAA +FT + + + + A
Sbjct: 375 CTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEA 434
Query: 404 GGLVIN---DTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449
G IN ++ +P GG ++SG+G +G + + ++ K+V
Sbjct: 435 GICWINTWGESPA-----EMPVGGYKQSGIGRENGIATLEHYTQIKSVQ 478
|
Length = 488 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 7e-31
Identities = 97/348 (27%), Positives = 163/348 (46%), Gaps = 28/348 (8%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 176
EP GV I+ PWNYP ++ + +AAGN +VLKP++V P ++ A+L V
Sbjct: 146 EPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKG 205
Query: 177 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVV 233
I ++ G+ + L D K+ +TG++ + + +M + A +L V LELGGKSP++
Sbjct: 206 VINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVSNLKKVSLELGGKSPLI 265
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL 293
+ ++ A RM M N G+ CI+ + + + + + E++ +PL
Sbjct: 266 IFADCDMDKAV-RMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPL 324
Query: 294 E-SKDLSRIVNSNHFARLSKLLDDDKVS----GKIVHGGER-DKNKLRIAPTLLLDVPRD 347
+ S D NH A L KL++ + +V+GG++ D+ PT+ DV
Sbjct: 325 DRSTDHG---PQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDH 381
Query: 348 SLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 405
I EE FGP++ I D ++ N LA+ +FT + + + AG
Sbjct: 382 MFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGT 441
Query: 406 LVIN-----DTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+ +N D A PFGG ++SG G G+ + + + K V
Sbjct: 442 VFVNTYNKTDVAA-------PFGGFKQSGFGKDLGEEALNEYLKTKTV 482
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 1e-30
Identities = 92/350 (26%), Positives = 153/350 (43%), Gaps = 25/350 (7%)
Query: 116 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 175
V +P GVV +ISPWN P LL V A+A GN +V+KPSE P +++LL GE M+
Sbjct: 136 VRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLL----GEVMNA 191
Query: 176 SSI-----RVVEG-AVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELG 227
+ VV G L + D I +TG +R +M AAA + PV ELG
Sbjct: 192 VGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAADGVKPVSFELG 251
Query: 228 GKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF 287
GK+ + + + A ++ + N GQ C+ + + + + + +LK E+
Sbjct: 252 GKNAAIVFADCDFDAAVAGILRSAF-LNTGQVCLGTERVYVERPIFDRFVAALKARAESL 310
Query: 288 -YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVH--------GGERDKNKLRIAP 338
G + ++ ++++ H ++ G V G + P
Sbjct: 311 KIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALA-GGAWVQP 369
Query: 339 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398
T+ +P + +++EEIFGP I D E+ + N LAA ++T + +
Sbjct: 370 TIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDLSRAHRVA 429
Query: 399 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+ G + +N + L PFGG + SG+G G S + ++ V
Sbjct: 430 RQMEVGIVWVN--SWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTNV 477
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 120 bits (301), Expect = 2e-29
Identities = 93/322 (28%), Positives = 151/322 (46%), Gaps = 13/322 (4%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
+P GVV I+PWNYP +++ + A+AAGN +VLKPSE+ P ++ LA+L +
Sbjct: 136 DPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGV 195
Query: 178 IRVVEGAVAETSALLD--QKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV-VF 234
+ ++ G L +K + TG+ +++ A + +ELGGK+PV VF
Sbjct: 196 VNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIKRTHMELGGKAPVIVF 255
Query: 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL- 293
D V G + N GQ C + I + L+E L + P
Sbjct: 256 DDADIDAVVEGVRTFGFY--NAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDD 313
Query: 294 ESKDLSRIVNSNHFARLSKLLDDDKVSG--KIVHGGERDKNK-LRIAPTLLLDVPRDSLI 350
ES +L + + H R+ K +++ K G K++ GGE+ K APTLL +D I
Sbjct: 314 ESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAI 373
Query: 351 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 410
+ +E+FGP++ I + D E + N LA+ ++T + + + G +N
Sbjct: 374 VQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVN- 432
Query: 411 TAVH-LAVHSLPFGGVQESGMG 431
H + V +P GG + SG G
Sbjct: 433 --THFMLVSEMPHGGQKLSGYG 452
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 117 bits (296), Expect = 9e-29
Identities = 105/402 (26%), Positives = 189/402 (47%), Gaps = 22/402 (5%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R++ L+ L ++ ER ++ + ++ KP L + EV ++ A EL +
Sbjct: 46 RIAILERLADLMEERADELALLIAREGGKP-LVDAKVEVTRAIDGVELAADELGQ-LGGR 103
Query: 101 KAKTSITTFPSS----AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSE 156
+ +T P+S A EP GVV+ IS +N+P L + V AIAAG +++KP+
Sbjct: 104 EIPMGLT--PASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPAL 161
Query: 157 VAPASSSLLAKLVGEY---MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMA 213
P S L+ E E AVAE D + + G++RV ++ +
Sbjct: 162 ATPLSCLAFVDLLHEAGLPEGWCQAVPCENAVAEKLVT-DPRVAFFSFIGSARVGWMLRS 220
Query: 214 AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYA 273
A T LE GG +PV+ D +L ++ G + + GQ C+S + + A
Sbjct: 221 KLAPG-TRCALEHGGAAPVIVDRSADLDAMIPPLVKGGF-YHAGQVCVSVQRVFVPAEIA 278
Query: 274 PKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK 331
+ L E +P ++ ++ R+ + +++ +G +++ GG+R
Sbjct: 279 DDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLS 338
Query: 332 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 391
+ APT+LLD PRD+ + ++EIFGP++ + + D ++++ NS A +FT +
Sbjct: 339 DTT-YAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDL 397
Query: 392 KLKQQFVETVSAGGLVINDTAVHLA--VHSLPFGGVQESGMG 431
+ + V + A +++ND H A V +PF G ++SG G
Sbjct: 398 DVALKAVRRLDATAVMVND---HTAFRVDWMPFAGRRQSGYG 436
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 2e-28
Identities = 91/333 (27%), Positives = 154/333 (46%), Gaps = 11/333 (3%)
Query: 115 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMD 174
++ +P GV I+PWN+P + A+AAG +VLKP+ P S+ LA+L
Sbjct: 142 VIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGI 201
Query: 175 LSSI-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 231
+ + VV G+ L K+ +TG++ + R +M AK + V LELGG +P
Sbjct: 202 PAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAP 261
Query: 232 -VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK 290
+VFD +L A + K+ N GQ C+ + + + E L+ + +
Sbjct: 262 FIVFDDA-DLDKAVEGALASKFR-NAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIG 319
Query: 291 NPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK-NKLRIAPTLLLDVPRD 347
+ LE + +++ A++ + + D G ++V GG+ + PT+L+DVP +
Sbjct: 320 DGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPAN 379
Query: 348 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 407
+ + EE FGPL P+ D N LAAY + + + E + G +
Sbjct: 380 AKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVG 439
Query: 408 INDTAVHLAVHSLPFGGVQESGMGAYHGKFSFD 440
IN + V PFGG++ SG+G K+ +
Sbjct: 440 INTGIISNEV--APFGGIKASGLGREGSKYGIE 470
|
Length = 482 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 115 bits (291), Expect = 5e-28
Identities = 94/339 (27%), Positives = 155/339 (45%), Gaps = 15/339 (4%)
Query: 111 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV- 169
S A + +P GVVL + PWN+P + A+ AGN +LK + P ++ LA L
Sbjct: 115 SRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFR 174
Query: 170 -GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGG 228
+ D ++ G+ A + L D + TG+ R V A A + +LELGG
Sbjct: 175 RAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGG 234
Query: 229 KSPVVFDSGINLKVACRRMIMGKWGC-NNGQACISPDHIITTKDYAPKLLESLKNELENF 287
P + +L A + + NNGQ+CI+ I D E +
Sbjct: 235 SDPFIVMPSADLDRAAETAVTAR--VQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAAL 292
Query: 288 YGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRIAPTLLLDV 344
+P D+ + + K +DD +G I+ GG+R D PT++ D+
Sbjct: 293 RVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDI 352
Query: 345 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 404
D + +EE+FGP+ + V I+++ +I N+ T L + +T ++ +++F++ + AG
Sbjct: 353 TPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAG 412
Query: 405 GLVIND-TAVHLAVHSLPFGGVQESGMG---AYHGKFSF 439
+ IN T + LPFGGV+ SG G + HG F
Sbjct: 413 QVFINGMTVSYPE---LPFGGVKRSGYGRELSAHGIREF 448
|
Length = 457 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 2e-25
Identities = 84/324 (25%), Positives = 153/324 (47%), Gaps = 12/324 (3%)
Query: 118 EPF-GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDL 175
EP GV+ I+P+N+P + AIA N +V+KPSE P S+ LA ++ E +
Sbjct: 137 EPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPP 196
Query: 176 SSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV 233
++VV G E + L + D + +TG + + + AA +LELGG P++
Sbjct: 197 QMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYI--AARAGYRRQVLELGGNDPLI 254
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL 293
+L A + G + N+GQ C + ++ + A + E L + + +P+
Sbjct: 255 VMEDADLDRAADLAVKGSYK-NSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPM 313
Query: 294 -ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLIM 351
S D+ +++ +++ G +++ G RD APT+L V ++
Sbjct: 314 DPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDGALY--APTVLDRVDPSMTLV 371
Query: 352 SEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDT 411
EE FGP+ P++ I+D+ I NS L++ + TN +F+ + G + + +
Sbjct: 372 REETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEV 431
Query: 412 AVHLAVHSLPFGGVQESGMGAYHG 435
+ + PFGG+++SG+G G
Sbjct: 432 PGY-RLELTPFGGIKDSGLGYKEG 454
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 2e-24
Identities = 85/329 (25%), Positives = 146/329 (44%), Gaps = 32/329 (9%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS- 177
P GV+ + P+N+P L +V A+ AGN +V KPSE+ PA + L+ +L E L
Sbjct: 97 PHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEE-AGLPPG 155
Query: 178 -IRVVEGAVAETSALLDQKW-DKICYTGNSRVARIVMAAAAKHLTPVL-LELGGKSPVVF 234
+ +V+G AL + D + +TG++ ++ A +L LE+GG +P+V
Sbjct: 156 VLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVV 215
Query: 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYA-----PKLLESLKN------- 282
++ A ++ + GQ C +I +L+E+ K
Sbjct: 216 WDVADIDAAAYLIVQSAF-LTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPD 274
Query: 283 ELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGER-DKNKLRIAPTL 340
F G PL + + AR D G+ + ER ++P
Sbjct: 275 AEPPFMG--PL--------IIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTAFLSPG- 323
Query: 341 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 400
++DV + + EEIFGPLL + D +++ + N+ L+A L ++++ L ++F+
Sbjct: 324 IIDVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLAR 383
Query: 401 VSAGGLVINDTAVHLAVHSLPFGGVQESG 429
+ AG + N A + PFGGV SG
Sbjct: 384 IRAGIVNWNRPTTG-ASSTAPFGGVGLSG 411
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 5e-24
Identities = 107/449 (23%), Positives = 184/449 (40%), Gaps = 36/449 (8%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDK--PELESSIY--- 77
V R TF + S R S L +L E +I + + + K + +
Sbjct: 44 VASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIAELITAEHGKTHSDALGDVARGL 103
Query: 78 EVALLKTSIKSALK-ELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLS 136
EV + S LK E + SI +P GV I+P+N+P ++
Sbjct: 104 EVVEHACGVNSLLKGETSTQVATRVDVYSIR----------QPLGVCAGITPFNFPAMIP 153
Query: 137 LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK 195
L AIA GN VLKPSE P+++ LA+L E + VV G LL+
Sbjct: 154 LWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHGDKEAVDRLLEHP 213
Query: 196 WDK-ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC 254
K + + G++ + R + + H V G K+ +V + A ++ +G
Sbjct: 214 DVKAVSFVGSTPIGRYIHTTGSAHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGA 273
Query: 255 NNGQACISPDHII---TTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLS 311
GQ C++ + ++ P++ E + ++ G +P ++ ++ R++
Sbjct: 274 A-GQRCMAISAAVLVGAADEWVPEIRERAE-KIRIGPGDDP--GAEMGPLITPQAKDRVA 329
Query: 312 KLLDDDKVSG-KIVHGGERDK-----NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV 365
L+ G +++ G K + PTLL VP EEIFGP+L +L
Sbjct: 330 SLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEA 389
Query: 366 DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN-DTAVHLAVHSLPFGG 424
D +E++ +IN+ +FT + ++F + G + +N V L S F G
Sbjct: 390 DTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFS--FTG 447
Query: 425 VQESGMGAYH--GKFSFDVFSHKKAVLSR 451
++S G +H GK ++ K V +R
Sbjct: 448 WKDSFFGDHHIYGKQGTHFYTRGKTVTTR 476
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 7e-23
Identities = 109/444 (24%), Positives = 187/444 (42%), Gaps = 53/444 (11%)
Query: 30 FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSA 89
F + + +R +L+ + K L R ++ + +++ KP ++ EVA KSA
Sbjct: 42 FRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQARA-EVA------KSA 94
Query: 90 LKELKHWMTPEKAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFLLSLDPVVGAI 144
L W E + P+ E I P G +L I PWN+P + V +
Sbjct: 95 --NLCDWYA-EHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPIL 151
Query: 145 AAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETS-----ALLDQKWDKI 199
AGN +LK + + L+A++ + D + V G + + + D + +
Sbjct: 152 LAGNGYLLKHAPNVMGCAQLIAQV---FKDAGIPQGVYGWLNADNDGVSQMINDSRIAAV 208
Query: 200 CYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQA 259
TG+ R + A A L +LELGG P + + +L++A + + G++ N GQ
Sbjct: 209 TVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQ-NTGQV 267
Query: 260 CISPDHIITTKDYAPKLLE-------SLK----NELENFYGKNPLESKDLSRIVNSNHFA 308
C + I + A E +LK + EN G P+ DL ++ A
Sbjct: 268 CAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALG--PMARFDLRDELHHQVEA 325
Query: 309 RLSK----LLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILT 364
L++ LL +K++G + APT+L +V + EE+FGP+ I
Sbjct: 326 TLAEGARLLLGGEKIAGAGNY----------YAPTVLANVTPEMTAFREELFGPVAAITV 375
Query: 365 VDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGG 424
E + ++ N L+A +FT ++ +Q + GG+ IN A + FGG
Sbjct: 376 AKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDA--RVAFGG 433
Query: 425 VQESGMGAYHGKFSFDVFSHKKAV 448
V++SG G F F + + V
Sbjct: 434 VKKSGFGRELSHFGLHEFCNIQTV 457
|
Length = 462 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 95.4 bits (237), Expect = 5e-21
Identities = 92/410 (22%), Positives = 180/410 (43%), Gaps = 35/410 (8%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R ++L L +L P+++ ++ K + ++I EV + A+ +++
Sbjct: 98 RAAKLDRLADLLELHMPELMALCVREAGK-TIHNAIAEV-------REAVDFCRYY---- 145
Query: 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160
AK E E GV + ISPWN+P + + A+AAGN ++ KP+E
Sbjct: 146 -AKQVRDVLG---EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSL 201
Query: 161 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAK 217
+ +L+ E +I+++ G A+ A L D + + +TG++ VA+++ A+
Sbjct: 202 IAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQ 261
Query: 218 HL---TPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAP 274
P++ E GG++ ++ DS + R ++ + + GQ C + + +D A
Sbjct: 262 REDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFD-SAGQRCSALRVLCVQEDVAD 320
Query: 275 KLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK 333
++L ++ ++ P L + D+ ++++ L ++ + K + D ++
Sbjct: 321 RVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSR 380
Query: 334 LR-----IAPTLL-LDVPRDSLIMSEEIFGPLLPIL--TVDKIEDSFDIINSGTKPLAAY 385
+APTL LD D +SEE+FGP+L ++ +++ D IN L
Sbjct: 381 ACQHGTFVAPTLFELD---DIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMG 437
Query: 386 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG 435
+ + + + + G +N V V PFGG SG G G
Sbjct: 438 VHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAG 487
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 93.2 bits (232), Expect = 5e-20
Identities = 83/327 (25%), Positives = 155/327 (47%), Gaps = 17/327 (5%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
P G V+ ISPWN+P + + A+AAGN+++ KP+E P ++ +L+ E +
Sbjct: 235 RPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPG 294
Query: 177 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKSP 231
++++ G A L D + + +TG++ VAR++ AK P++ E GG++
Sbjct: 295 VLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNA 354
Query: 232 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN 291
++ DS + ++ + + GQ C + + +D A ++L LK + N
Sbjct: 355 MIVDSSALAEQVVADVLASAFD-SAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGN 413
Query: 292 P-LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR---IAPTLL-LDVPR 346
P + D+ ++++ A + K + + G++VH + + +APTL+ L+
Sbjct: 414 PDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELENLD 473
Query: 347 DSLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 404
+ + E+FGP+L ++ D++++ D IN+ L + T + E AG
Sbjct: 474 E---LQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAG 530
Query: 405 GLVINDTAVHLAVHSLPFGGVQESGMG 431
L +N V V PFGG SG G
Sbjct: 531 NLYVNRNIVGAVVGVQPFGGEGLSGTG 557
|
Length = 769 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 89.0 bits (220), Expect = 1e-18
Identities = 88/349 (25%), Positives = 153/349 (43%), Gaps = 24/349 (6%)
Query: 116 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MD 174
+ EP GV I P+N+P ++ L A+ GN +LKPSE P +S +LA+L E +
Sbjct: 246 IREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLP 305
Query: 175 LSSIRVVEGAVAETSALL-DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV 233
+ +V G +A+ D+ + + G++ + A AA + +G K+ +
Sbjct: 306 DGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGL 365
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHII---TTKDYAPKLLESLKNELENFYGK 290
N+ ++ +G GQ C++ ++ K + KL+E K L+ G
Sbjct: 366 VLPDANIDATLNALLAAGFGA-AGQRCMALSTVVFVGDAKSWEDKLVERAK-ALKVTCGS 423
Query: 291 NPLESKDLSRIVNSNHFARLSKLLDDDKVSGK---------IVHGGERDKNKLRIAPTLL 341
P DL +++ R+ +L+ G +V G E+ I PT+L
Sbjct: 424 EP--DADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGN---FIGPTIL 478
Query: 342 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV 401
V D EEIFGP+L + + +++ IIN A +FT++ ++F +
Sbjct: 479 SGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDI 538
Query: 402 SAGGLVINDTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAV 448
AG + IN + + + F G + S G ++GK D F+ K V
Sbjct: 539 EAGQIGIN-VPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLV 586
|
Length = 604 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 88.3 bits (219), Expect = 1e-18
Identities = 85/319 (26%), Positives = 142/319 (44%), Gaps = 13/319 (4%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLA---KLVGEYMDL 175
P GVVL I P+NYP L++ + A+ AGNA+VLKP ++ + L G
Sbjct: 158 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAG--FPK 215
Query: 176 SSIRVVEGAVAETSALLDQKWDKIC--YTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV 233
I V G +E L C +TG I A + P+ +ELGGK +
Sbjct: 216 GLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKKAG---MVPLQMELGGKDACI 272
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL 293
+L +A +I G + +GQ C + ++ + A L+E + ++ P
Sbjct: 273 VLEDADLDLAAANIIKGGFS-YSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPE 331
Query: 294 ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSE 353
+ D++ +V+ + + L+ D K G + + L I P LL +V D I E
Sbjct: 332 DDCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKREGNL-IWPLLLDNVRPDMRIAWE 390
Query: 354 EIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAV 413
E FGP+LP++ ++ +E+ N+ L +FT + + + G + IN
Sbjct: 391 EPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPA 450
Query: 414 HLAVHSLPFGGVQESGMGA 432
H PF G+++SG+G+
Sbjct: 451 RGPDH-FPFQGLKDSGIGS 468
|
Length = 496 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 87.3 bits (217), Expect = 3e-18
Identities = 76/327 (23%), Positives = 149/327 (45%), Gaps = 17/327 (5%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL---VGEYMD 174
GV + ISPWN+P + + A+AAGN ++ KP+E P ++ +L G D
Sbjct: 166 HGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRD 225
Query: 175 LSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARI---VMAAAAKHLTPVLLELGGK 229
+ +++V G E L + D + +TG++ A++ +A + P++ E GGK
Sbjct: 226 V--LQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGK 283
Query: 230 SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG 289
+ ++ DS + A + ++ +G + GQ C + + ++ A + +E LK + +
Sbjct: 284 NAMIVDSTALPEQAVKDVVQSAFG-SAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKV 342
Query: 290 KNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRI-APTLLLDVPRD 347
+P + D+ +++ L + + ++ D AP ++ V
Sbjct: 343 GDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEAWLIAPAPLDDGNGYFVAPGIIEIVGIF 402
Query: 348 SLIMSEEIFGPLLPILTVDK--IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 405
L + E+FGP+L ++ ++++ + IN+ L + + +++ + + E V AG
Sbjct: 403 DL--TTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGN 460
Query: 406 LVINDTAVHLAVHSLPFGGVQESGMGA 432
L IN V PFGG SG G
Sbjct: 461 LYINRNITGAIVGRQPFGGWGLSGTGP 487
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 86.1 bits (214), Expect = 5e-18
Identities = 76/292 (26%), Positives = 132/292 (45%), Gaps = 33/292 (11%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVG---AIAA--GNALVLKPSEVAPASSSLLAKLVGEYM 173
P GVV +I+ +N+P V G AIA GN +V KPS P ++ + K+V +
Sbjct: 132 PLGVVGVITAFNFPV-----AVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVL 186
Query: 174 -------DLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 226
++S+ V E D + + +TG++ V R V A A LLEL
Sbjct: 187 EKNGLPGAIASLVCGGADVGEALVK-DPRVPLVSFTGSTAVGRQVGQAVAARFGRSLLEL 245
Query: 227 GGK-SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 285
GG + +V + +L +A R ++ G GQ C + +I + ++LE LK
Sbjct: 246 GGNNAIIVMEDA-DLDLAVRAVLFAAVG-TAGQRCTTTRRLIVHESIYDEVLERLKK--- 300
Query: 286 NFYGK----NPLESKDL-SRIVNSNHFARLSKLLDDDKVS-GKIVHGGER-DKNKLRIAP 338
Y + +PL+ L + +++ K G ++ GG+ D + P
Sbjct: 301 -AYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEP 359
Query: 339 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
T++ + D+ I+ EE F P+L +L D +E++ N + L++ +FT +
Sbjct: 360 TIV-EGLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTD 410
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 73.4 bits (180), Expect = 5e-14
Identities = 70/331 (21%), Positives = 129/331 (38%), Gaps = 24/331 (7%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE--YMDLS 176
P+G VL+I +N+P + L + GA+A GN +++KP ++ +L+ +
Sbjct: 100 PYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPE 159
Query: 177 SIRVVEGAVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235
+ ++ G ALL + +TG+SRVA + A + LEL G + V
Sbjct: 160 DVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDA--KQARIYLELAGFNWKVLG 217
Query: 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYA-PKLLESLKNELENFYGKNPLE 294
+ +GQ C + + ++++ L+E LK L + LE
Sbjct: 218 PDAQAVDYVAWQCVQDMTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLA----RRKLE 273
Query: 295 SKDLSRIVNSNHFARLSKLLDDDKV----SGKIVHGGERDKNKLRIAPTLLLDVPRDS-- 348
L + A ++ + + SGK + + L VP D
Sbjct: 274 DLLLGPVQTFTTLAMIAHMENLLGSVLLFSGKELKNHSIPSIYGACVASALF-VPIDEIL 332
Query: 349 ---LIMSEEIFGP--LLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV-ETVS 402
+++EEIFGP ++ D++ +++ L A +++N+ Q+ +
Sbjct: 333 KTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWV 392
Query: 403 AGGLV-INDTAVHLAVHSLPFGGVQESGMGA 432
AG I +A + GG GA
Sbjct: 393 AGRTYAILRGRTGVAPNQNHGGGPAADPRGA 423
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 72.9 bits (179), Expect = 1e-13
Identities = 83/338 (24%), Positives = 144/338 (42%), Gaps = 41/338 (12%)
Query: 121 GVVLIISPWNYPFLLSLDPVVGAIAA---------GNALVLKPSEVAPASSSLLAKLVGE 171
G V ISP+N+ AIA GN ++ KPS+ A S+ L+ +++ E
Sbjct: 171 GFVYAISPFNFT----------AIAGNLAGAPALMGNTVIWKPSDTAMLSNYLVMRILEE 220
Query: 172 Y-MDLSSIRVV--EGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLT-----PVL 223
+ I V +G + + L D I +TG++ + + A++L P +
Sbjct: 221 AGLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVAQNLDRYHNFPRI 280
Query: 224 L-ELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKN 282
+ E GGK V +++ I G + GQ C + + P+ L
Sbjct: 281 VGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQ-GQKCSACSRLYVPHSLWPRFKGRLLA 339
Query: 283 ELENF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG---KIVHGGERDKNK-LRIA 337
EL G + +++ FA++ K ++ K I+ GG+ D + +
Sbjct: 340 ELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGGKYDDSVGYFVE 399
Query: 338 PTLLL-DVPRDSLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKL 393
PT++ P++ L M EEIFGP+L + DK ++ D+++S T L +F ++
Sbjct: 400 PTVVESKDPQEPL-MKEEIFGPVLTVYVYPDDKYKEILDLVDSTTSYGLTGAVFAKDRDA 458
Query: 394 KQQFVETV--SAGGLVINDTAVHLAVHSLPFGGVQESG 429
+ + + +AG IND V PFGG + SG
Sbjct: 459 ILEADKVLRFAAGNFYINDKPTGAVVGQQPFGGARASG 496
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 71.0 bits (174), Expect = 4e-13
Identities = 80/346 (23%), Positives = 160/346 (46%), Gaps = 30/346 (8%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVG-----AIAAGNALVLKPSEVAPASSSLLAKLVGEYM 173
P G+V +I+ +N+P V+G A+ GN +V K + P + + KLV E +
Sbjct: 154 PLGIVGVITAFNFPC-----AVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVL 208
Query: 174 DLSSI------RVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELG 227
+ +++ GA + D + + +TG+S+V +V LLEL
Sbjct: 209 EKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNARFGKCLLELS 268
Query: 228 GKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF 287
G + ++ ++++A R ++ G GQ C + ++ + +LE L +
Sbjct: 269 GNNAIIVMDDADIQLAVRSVLFAAVG-TAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQV 327
Query: 288 YGKNPLESKDLSRIVNSNH----FARLSKLLDDDKVSGKIVHGG---ERDKNKLRIAPTL 340
+PLE L +++ F + +++ GKI+ GG E + N + PT+
Sbjct: 328 KIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQ--GGKILTGGSAIESEGN--FVQPTI 383
Query: 341 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV-E 399
+ ++ D+ ++ EE+FGP+L ++ +E++ +I NS + L++ +FT N + +++
Sbjct: 384 V-EISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGP 442
Query: 400 TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 445
S G+V + + A FGG + +G G G S+ + +
Sbjct: 443 LGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRR 488
|
Length = 508 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 62.6 bits (153), Expect = 3e-10
Identities = 81/332 (24%), Positives = 153/332 (46%), Gaps = 27/332 (8%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
+P G V+ ISPWN+P + + A+ AGN ++ KP+E P L+A + +
Sbjct: 675 KPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTP----LIAARAVRLLHEAG 730
Query: 178 I-----RVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHL---TPVLLELG 227
+ +++ G A L D + + +TG++ VAR++ AK P++ E G
Sbjct: 731 VPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETG 790
Query: 228 GKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII-TTKDYAPKLLESLKNELEN 286
G++ ++ DS + +I + + GQ C S ++ +D A ++L LK ++
Sbjct: 791 GQNAMIVDSSALPEQVVADVIASAFD-SAGQRC-SALRVLCLQEDVADRVLTMLKGAMDE 848
Query: 287 FYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR---IAPTLL- 341
+P S D+ ++++ A + ++ + +G++VH + +APTL+
Sbjct: 849 LRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIE 908
Query: 342 LDVPRDSLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 399
+D D + E+FGP+L ++ D+++ D IN+ L L + +
Sbjct: 909 IDSISD---LEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHSRIDETIAHVTS 965
Query: 400 TVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 431
+ AG + +N + V PFGG SG G
Sbjct: 966 RIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTG 997
|
Length = 1208 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 9e-10
Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 23/238 (9%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKP---- 70
+AA V+ R F + S+ R + ++ +L E + ++ + + ++ KP
Sbjct: 38 QVDAA---VRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAEVIARETGKPLWEA 94
Query: 71 --ELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISP 128
E+ + I ++A+ SI++ H T EK +A + P GVV + P
Sbjct: 95 ATEVTAMINKIAI---SIQA-----YHERTGEKRSE---MADGAAVLRHRPHGVVAVFGP 143
Query: 129 WNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAE 187
+N+P L +V A+ AGN +V KPSE+ P + L KL + + + +V+G
Sbjct: 144 YNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQGGRET 203
Query: 188 TSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVL-LELGGKSPVVFDSGINLKVA 243
AL D + +TG++ ++ A +L LE+GG +P+V D ++ A
Sbjct: 204 GKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADIDAA 261
|
Length = 487 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 57.6 bits (139), Expect = 6e-09
Identities = 68/311 (21%), Positives = 104/311 (33%), Gaps = 61/311 (19%)
Query: 114 EIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYM 173
+ P GV + I P P L + + IA N + +P AP ++ LA L
Sbjct: 95 YVRAFPIGVTMHILPSTNP-LSGITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAAD 153
Query: 174 DLSSIRVVEGAVAETSALLDQ------KWDKICYTGNSRVARIVMAAAAKH--LTPVLLE 225
+++ V S L + K D I TG AA KH PV+
Sbjct: 154 AAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVD----AAVKHSPHIPVIGF 209
Query: 226 LGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 285
G SPVV D + + A + K + AC S ++ D L E K +L
Sbjct: 210 GAGNSPVVVDETADEERASGSVHDSK--FFDQNACASEQNLYVVDDVLDPLYEEFKLKLV 267
Query: 286 NFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVP 345
K P E+K LS+ + DD+
Sbjct: 268 VEGLKVPQETKPLSKETTPSF---------DDEAL------------------------- 293
Query: 346 RDSLIMSEEIFGPLLPILTV----DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV 401
E PL V +E+++ II SG P ++T+ FV+ +
Sbjct: 294 --------ESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYI 345
Query: 402 SAGGLVINDTA 412
N+++
Sbjct: 346 DTASFYPNESS 356
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 2e-08
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 22/219 (10%)
Query: 27 RGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKP------ELESSIYEVA 80
R F + S R++ ++ +L ER+ + + ++ KP E+ S I +VA
Sbjct: 45 RAAFPAWARLSLEERIAVVQRFAALLEERKEALARVIARETGKPLWETRTEVASMIGKVA 104
Query: 81 LLKTSIKSALKELKHWMTPEKAKTSITTFP-SSAEIVPEPFGVVLIISPWNYPFLLSLDP 139
+ SIK+ E+ S P A + P GVV + P+N+P L
Sbjct: 105 I---SIKA---------YHERTGESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGH 152
Query: 140 VVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WD 197
+V A+ AGN +V KPSE+ P + KL + + + +V+GA AL D
Sbjct: 153 IVPALLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQGARETGVALAAHPDID 212
Query: 198 KICYTGNSRVARIVMAAAAKHLTPVL-LELGGKSPVVFD 235
+ +TG+S ++ A +L LE+GG +P++ D
Sbjct: 213 GLLFTGSSNTGHLLHRQFAGRPEKILALEMGGNNPLIVD 251
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 2e-08
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 21/133 (15%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI 178
P G V+ ISPWN+P + V A+AAGN+++ KP+E P ++ ++ L
Sbjct: 768 PLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRI------LLEA 821
Query: 179 RVVEGAV------AET-SALL--DQKWDKICYTGNSRVARIVMAAAAKHL------TPVL 223
V G V ET A L D + + +TG++ VAR++ A L P++
Sbjct: 822 GVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLI 881
Query: 224 LELGGKSPVVFDS 236
E GG++ ++ DS
Sbjct: 882 AETGGQNAMIVDS 894
|
Length = 1318 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 55.3 bits (134), Expect = 4e-08
Identities = 76/337 (22%), Positives = 147/337 (43%), Gaps = 40/337 (11%)
Query: 121 GVVLIISPWNYPFLLSLDPVVGAIAA---------GNALVLKPSEVAPASSSLLAKLVGE 171
G V +SP+N+ AI GN ++ KPS+ A S+ L+ K++ E
Sbjct: 172 GFVYAVSPFNFT----------AIGGNLAGAPALMGNVVLWKPSDTAVLSNYLVYKILEE 221
Query: 172 Y-MDLSSIRVV--EGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLT-----PVL 223
+ I V +G V + L + +TG++ + + ++L P +
Sbjct: 222 AGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRI 281
Query: 224 L-ELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKN 282
+ E GGK+ + ++ + G + GQ C + + P++ E L
Sbjct: 282 VGETGGKNFHLVHPSADVDSLVTATVRGAFE-YQGQKCSAASRAYVPESLWPEVKERLLE 340
Query: 283 ELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSG--KIVHGGERDKNK-LRIAP 338
EL+ +P + S + +++ F R+ +D K +I+ GG+ D + + P
Sbjct: 341 ELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEP 400
Query: 339 TLLL-DVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTK-PLAAYLFTNNKKLK 394
T++ P+ +M+EEIFGP+L + E++ +++++ + L +F ++K
Sbjct: 401 TVIETTDPKHK-LMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAI 459
Query: 395 QQFVETV--SAGGLVINDTAVHLAVHSLPFGGVQESG 429
++ + + +AG IND V PFGG + SG
Sbjct: 460 REATDALRNAAGNFYINDKPTGAVVGQQPFGGARASG 496
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 5e-07
Identities = 53/280 (18%), Positives = 105/280 (37%), Gaps = 43/280 (15%)
Query: 115 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMD 174
I+ EP GVV I+P P + + ++ N+++ P A + A L+ +
Sbjct: 91 IIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAV 150
Query: 175 LSS-----IRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELG 227
+ I ++ E + L + + TG V + AA P +
Sbjct: 151 AAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPAVVK----AAYSSGKPAIGVGA 206
Query: 228 GKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF 287
G +PVV D ++K A + ++ K +NG C S +I +++ + +
Sbjct: 207 GNTPVVIDETADIKRAVQSIVKSK-TFDNGVICASEQSVIVVDSVYDEVMRLFEGQ---- 261
Query: 288 YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRD 347
G L +++L ++ +L + V+ IV ++ +IA L VP++
Sbjct: 262 -GAYKLTAEELQQVQPV--------ILKNGDVNRDIV-----GQDAYKIAAAAGLKVPQE 307
Query: 348 SLIM-------------SEEIFGPLLPILTVDKIEDSFDI 374
+ I+ + E P+L + D+
Sbjct: 308 TRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAK 347
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 2e-06
Identities = 58/289 (20%), Positives = 114/289 (39%), Gaps = 12/289 (4%)
Query: 121 GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL--SSI 178
GV + I+ +N+P L+ A AG + KP+ + L + + E L S+
Sbjct: 146 GVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSL 205
Query: 179 RVVEGAVAETSALLDQKWDKICYTGNSRVARIVMA--AAAKHLTPVLLELGGKSPVVFDS 236
+++ G+ + LD + D + +TG++ A + A + E + +
Sbjct: 206 QLICGSAGDLLDHLDHR-DVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAILGE 264
Query: 237 GINLKV----ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 292
+ I+ + GQ C + +I K +L++L+ L +P
Sbjct: 265 DATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDP 324
Query: 293 L-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLL-DVPRDSL 349
E D+ +V+ A + + +G ++ GG + PTLLL + P
Sbjct: 325 REEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGA 384
Query: 350 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398
+ + E FGP+ ++ + G L A L T++ + +QF+
Sbjct: 385 VHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFI 433
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 49.0 bits (118), Expect = 4e-06
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 14/126 (11%)
Query: 121 GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYM-----DL 175
GV + ISPWN+P + L V A+AAGN ++ KP+E + L+A + +
Sbjct: 686 GVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAE----QTPLIAAEAVKLLHEAGIPK 741
Query: 176 SSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLL--ELGGKS 230
++++ G A A L D + + +TG++ ARI+ AA+ V L E GG++
Sbjct: 742 DVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQN 801
Query: 231 PVVFDS 236
++ DS
Sbjct: 802 AMIVDS 807
|
Length = 1038 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 3e-05
Identities = 27/90 (30%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 341 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 400
++DV + + EE FGPLL ++ D +++ I N+ L+A L +++++L +F+
Sbjct: 360 IIDVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLE 419
Query: 401 VSAGGLVIN-DTAVHLAVHSLPFGGVQESG 429
+ AG ++N + + A + PFGG+ SG
Sbjct: 420 IRAG--IVNWNKPLTGASSAAPFGGIGASG 447
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 1e-04
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 353 EEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN-DT 411
EE FGPLL ++ D +++ + N+ L+A L +++++ QF+ + AG ++N +
Sbjct: 374 EEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAG--IVNWNK 431
Query: 412 AVHLAVHSLPFGGVQESG 429
+ A + PFGGV SG
Sbjct: 432 PLTGASSAAPFGGVGASG 449
|
Length = 487 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 42.1 bits (100), Expect = 6e-04
Identities = 60/290 (20%), Positives = 102/290 (35%), Gaps = 52/290 (17%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVG-----AIAAGNALVLKPSEVAPASSSLLAKLVGEY- 172
P G V + N+P S V G A+AAG +V+K P +S L+A+ +
Sbjct: 105 PLGPVAVFGASNFPLAFS---VAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAAL 161
Query: 173 ----MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLT--PVLL 224
+ +++G E L + +TG+ R R + AAA P
Sbjct: 162 RATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYA 221
Query: 225 ELGGKSPVVFDSGINLKVACR----------RMIMGKWGCNNGQACISPDHIITTKDYA- 273
ELG +PV G +A R + +G GQ C +P ++ A
Sbjct: 222 ELGSVNPVFILPG---ALAERGEAIAQGFVGSLTLG-----AGQFCTNPGLVLVPAGPAG 273
Query: 274 PKLLESLKNELENFYGKNPLESKD---LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD 330
+ +L L + L+ + + + L V ++ GG
Sbjct: 274 DAFIAALAEALA--------AAPAQTMLTPGIAEAYRQGVEALAAAPGVR--VLAGGAAA 323
Query: 331 KNKLRIAPTLL---LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS 377
+ + APTL + EE+FGP ++ D + + +
Sbjct: 324 EGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEA 373
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 493 | |||
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 100.0 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.95 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.76 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.5 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 99.25 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.09 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 96.95 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 96.75 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 96.53 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 96.51 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 96.44 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 95.54 | |
| PLN02926 | 431 | histidinol dehydrogenase | 95.45 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 95.26 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 94.98 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 93.72 |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-102 Score=803.78 Aligned_cols=472 Identities=71% Similarity=1.148 Sum_probs=436.8
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHH
Q 011107 13 VFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKE 92 (493)
Q Consensus 13 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~ 92 (493)
.+...|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..++...|+..+++.+++++++
T Consensus 6 ~~~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~ 85 (484)
T PLN02174 6 MFGAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQ 85 (484)
T ss_pred hcCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999998766999999999999999
Q ss_pred HHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhh
Q 011107 93 LKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY 172 (493)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~a 172 (493)
++++.++..........+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~~ 165 (484)
T PLN02174 86 LKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQY 165 (484)
T ss_pred HHHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHh
Confidence 99887644322222222345688999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEEEeCChHhHHHHHhCCCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHHHHhhc
Q 011107 173 MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKW 252 (493)
Q Consensus 173 lP~g~v~vv~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~~~~ 252 (493)
+|+|+||+|+|+.+.+..|+++++|+|+||||+++|+.|++.+++++||+++|||||||+||++|||+|.|++.+++++|
T Consensus 166 lp~gvv~vv~G~~~~~~~l~~~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g~f 245 (484)
T PLN02174 166 LDSSAVRVVEGAVTETTALLEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKW 245 (484)
T ss_pred CCCCEEEEEECChHHHHHHhcccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHh
Confidence 99999999999777788888767999999999999999999999999999999999999999999999999999999998
Q ss_pred cc-CCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCeEEeCCccCC
Q 011107 253 GC-NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 331 (493)
Q Consensus 253 ~~-~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~ 331 (493)
. |+||.|++++|||||++++|+|+++|+++++++++|+|.+++++||++++.+++++.++|+++.+++++++||..+.
T Consensus 246 -~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~ga~~~~GG~~~~ 324 (484)
T PLN02174 246 -GCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLLDEKEVSDKIVYGGEKDR 324 (484)
T ss_pred -hCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcccCCcCCCCCHHHHHHHHHHHHHHHcCCEEEECCCcCC
Confidence 6 99999999999999999999999999999999999999778899999999999999999999866789999997654
Q ss_pred CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcccceEEEcCC
Q 011107 332 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDT 411 (493)
Q Consensus 332 ~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~ 411 (493)
.|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++
T Consensus 325 ~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~v~IN~~ 404 (484)
T PLN02174 325 ENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDI 404 (484)
T ss_pred CCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcceEEECCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEecCCCCCCccCCCCchhHHHHHHHHHhhhhhHHHH
Q 011107 412 AVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIR 485 (493)
Q Consensus 412 ~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 485 (493)
..+...+.+||||+|.||+|+++|.+++++||+.|+|.++..+.+.+++||||+..+.++++.+++..+-++.+
T Consensus 405 ~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~~~~~~~~ 478 (484)
T PLN02174 405 AVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSLFGDSAVRYPPYSRGKLRLLKALVDSNIFDIFK 478 (484)
T ss_pred cCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEECCccCcccccCCCCChHHHHHHHHHHhhchhhhhh
Confidence 76544578999999999999999999999999999999887666788999999999999999998855544443
|
|
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-97 Score=773.13 Aligned_cols=463 Identities=46% Similarity=0.783 Sum_probs=433.1
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHH
Q 011107 13 VFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKE 92 (493)
Q Consensus 13 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~ 92 (493)
..+.+++++++++|++||..|+.+|.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++++
T Consensus 3 ~~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~ 82 (493)
T PTZ00381 3 PDNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKH 82 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999998777999999999999999
Q ss_pred HHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhh
Q 011107 93 LKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY 172 (493)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~a 172 (493)
+++|++.+.........+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~ 162 (493)
T PTZ00381 83 LDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY 162 (493)
T ss_pred HHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh
Confidence 99997765433221122346788999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEEEeCChHhHHHHHhCCCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHHHHhhc
Q 011107 173 MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKW 252 (493)
Q Consensus 173 lP~g~v~vv~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~~~~ 252 (493)
+|+|++++++|+.+.+..|++|++|.|+||||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|
T Consensus 163 lp~~~v~vv~g~~~~~~~l~~~~~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g~~ 242 (493)
T PTZ00381 163 LDPSYVRVIEGGVEVTTELLKEPFDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKF 242 (493)
T ss_pred CCcCEEEEecCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHHHH
Confidence 99999999999878889999989999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCeEEeCCccCCC
Q 011107 253 GCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKN 332 (493)
Q Consensus 253 ~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~ 332 (493)
.|+||.|+++++||||++++|+|+++|+++++++.++++++++++||++++++++++.+++++ +++++++||..+..
T Consensus 243 -~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~ri~~~i~~--~ga~~~~gG~~~~~ 319 (493)
T PTZ00381 243 -LNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIKD--HGGKVVYGGEVDIE 319 (493)
T ss_pred -hhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHhCCCCccCCCcCCCCCHHHHHHHHHHHHh--CCCcEEECCCcCCC
Confidence 999999999999999999999999999999999987677788999999999999999999973 57899999977666
Q ss_pred CceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcccceEEEcCCC
Q 011107 333 KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA 412 (493)
Q Consensus 333 g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~ 412 (493)
++|++|||+.+++++|++++||+||||++|++|+|+||||+++|++++||++||||+|.+.++++++++++|.|+||++.
T Consensus 320 ~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~v~IN~~~ 399 (493)
T PTZ00381 320 NKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCV 399 (493)
T ss_pred CCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec--CCCCCCccCCCCchhHHHHHHHHHhh
Q 011107 413 VHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG--FIGDVPVRYPPYTKGKLRLLKVLISG 478 (493)
Q Consensus 413 ~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~--~~~~~~~~~~p~~~~~~~~~~~~~~~ 478 (493)
.+...+.+||||+|.||+|+++|.+|+++||+.|+|..+. .+.+.+++||||+..+.++++.+++.
T Consensus 400 ~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~ 467 (493)
T PTZ00381 400 FHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKSTGNSFDLSLRYPPYTSFKSWVLSFLLKL 467 (493)
T ss_pred ccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEccccccCcccccCCCCChHHHHHHHHHHhc
Confidence 6666788999999999999999999999999999998886 34567889999999999999998876
|
|
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-97 Score=768.83 Aligned_cols=473 Identities=52% Similarity=0.873 Sum_probs=437.2
Q ss_pred CCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHH
Q 011107 14 FDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKEL 93 (493)
Q Consensus 14 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~ 93 (493)
++.+|+++++++|++||+.|+.+|..+|.++|++++++|++++++|+++++.|+|||..++...|+..+++.++++++.+
T Consensus 3 ~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~~ 82 (484)
T PLN02203 3 APGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSNL 82 (484)
T ss_pred CCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999986569999999999999998
Q ss_pred HhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhhc
Q 011107 94 KHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYM 173 (493)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~al 173 (493)
+++........+....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~l 162 (484)
T PLN02203 83 KKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKYL 162 (484)
T ss_pred HHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhC
Confidence 88865432111111123456889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCChHhHHHHHhCCCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcC---CCCHHHHHHHHHHh
Q 011107 174 DLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS---GINLKVACRRMIMG 250 (493)
Q Consensus 174 P~g~v~vv~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~---daDl~~Aa~~i~~~ 250 (493)
|+|+||+++|+.+.+..|+.|++|.|+||||+++|+.|++.++++++|+++|+|||||+||++ |||+|.|++.++++
T Consensus 163 P~gvv~vv~g~~~~~~~l~~~~vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~aa~~i~~~ 242 (484)
T PLN02203 163 DSKAVKVIEGGPAVGEQLLQHKWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGG 242 (484)
T ss_pred CcCEEEEEeCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHHHHHHHHH
Confidence 999999999987889999999999999999999999999999999999999999999999997 69999999999999
Q ss_pred hccc-CCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCeEEeCCcc
Q 011107 251 KWGC-NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER 329 (493)
Q Consensus 251 ~~~~-~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~ 329 (493)
+| . |+||.|++++|+|||++++|+|+++|.+++.++++|+|.+.+++||++++++++++.++++++..++++++||..
T Consensus 243 ~f-~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~~~~~~~gg~~ 321 (484)
T PLN02203 243 KW-GSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDPRVAASIVHGGSI 321 (484)
T ss_pred hc-ccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcCCCcCCCCCHHHHHHHHHHHHHHHhCCeEEeCCCc
Confidence 99 7 799999999999999999999999999999999999997667999999999999999999998777899999876
Q ss_pred CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcccceEEEc
Q 011107 330 DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409 (493)
Q Consensus 330 ~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN 409 (493)
+..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+++.++++++++|.|+||
T Consensus 322 ~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~V~IN 401 (484)
T PLN02203 322 DEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFN 401 (484)
T ss_pred CCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEC
Confidence 55689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEecCCCCCCccCCCCchhHHHHHHHHHhhhhhHHHHHH
Q 011107 410 DTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRAL 487 (493)
Q Consensus 410 ~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 487 (493)
++..+...+.+||||+|.||+|+++|.+++++||+.|+|++++.....+++||||...|.++++.++++-|-++..-+
T Consensus 402 ~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 479 (484)
T PLN02203 402 DAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRRSLLTEFEFRYPPWNDFKLGFLRLVYRFDYFGLLLLL 479 (484)
T ss_pred CcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEcCccCcccccCCCCChHHHHHHHHHHhhcchhhhccc
Confidence 976554557899999999999999999999999999999988766688899999999999999999996555555333
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-99 Score=744.99 Aligned_cols=442 Identities=26% Similarity=0.389 Sum_probs=415.1
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (493)
.+|+++++...+.+||++++++||+||+ .|++++..+|.++|+++++++++++++|+.+.+.+.|||..+++..++..
T Consensus 45 tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~~lA~~E~~d~GKp~~~a~~~Dl~~ 124 (501)
T KOG2450|consen 45 TGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDADVLAALEVLDNGKPYPEALVSDLPP 124 (501)
T ss_pred CCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhHHHhhhcccccCCcchhhhhcCchh
Confidence 4789999999999999999999999999 79999999999999999999999999999999999999999998679999
Q ss_pred HHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
+++.++|++........ ...+ .......+++++|+|||+.|.|||||+....|+++|||++||+||+||++++|++
T Consensus 125 ~~~~~ry~ag~ad~~~~-~~~~---~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae~tpls 200 (501)
T KOG2450|consen 125 AIDCFRYYAGWADKIHG-STIP---TDGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAEQTPLT 200 (501)
T ss_pred hhhHHHhhccchhhccc-ccCC---CCCceEEEecCCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCCCCCch
Confidence 99999999987765521 1111 1223467999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhC-CCCeEEEeCCHHHHHHHHHHHhc-cccchhhhcCCCCeEEEcCC
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~-~v~~v~ftGs~~~g~~i~~~a~~-~~~~~~~elgG~~p~iV~~d 237 (493)
+..+++++.++ +|+|++|+|+| +.+.+.+|.+| +|+.|+||||+.+|+.|++.+++ ++||+++|+|||+|.||++|
T Consensus 201 al~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~~n~K~vtLElGGKsp~Ivf~D 280 (501)
T KOG2450|consen 201 ALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAESNLKPVTLELGGKSPIIVFDD 280 (501)
T ss_pred HHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhhcCCceeccccCCCCcceEecc
Confidence 99999999999 99999999999 78899999999 59999999999999999999885 48999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHh-hcCCCC-CCCCcccccCCHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN-FYGKNP-LESKDLSRIVNSNHFARLSKLLD 315 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~ 315 (493)
||+|.|++.++.+.| +|+||.|++.+|+|||++|||+|+++++++..+ +++||| ++.+..||.+++.|++++.+||+
T Consensus 281 adld~av~~~~~~iF-~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~~~qG~~i~~~q~ekI~~yi~ 359 (501)
T KOG2450|consen 281 ADLDLAVENAAFGIF-FNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEGTEQGPQISKTQYEKILGYIE 359 (501)
T ss_pred cchHHHHHHHHHHhh-cccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCCCcccccccccCHHHHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999999966 899988 67999999999999999999999
Q ss_pred HHHh-CCeEEeCCcc-CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 316 DDKV-SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 316 ~a~~-~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
.+++ |+++++||.+ .+.|+|+.|||+++++++|+|++||+||||++|++|++.||+|+++|++.|||+++|||+|.++
T Consensus 360 ~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE~i~~AN~t~yGLAa~V~t~dl~~ 439 (501)
T KOG2450|consen 360 SGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEEVIERANNTTYGLAAGVFTKDLDK 439 (501)
T ss_pred HHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHHHHHHhcCCcccceeeEeccChHH
Confidence 9976 6799999976 4579999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+.++++.+++|+||||++.. ..+..||||+|+||+||+.|.+++.+||+.|+|+++-
T Consensus 440 a~~va~~l~aGtVwiN~y~~--~~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv~v~~ 496 (501)
T KOG2450|consen 440 AHRVANALQAGTVWINCYNV--FDAQVPFGGFKMSGIGRELGEYGLEAYTEVKTVTVKL 496 (501)
T ss_pred HHHHHHHhcCceEEEecccc--ccccCCccccccccCCccccHHHHhhcceeeEEEEeC
Confidence 99999999999999999765 6789999999999999999999999999999998863
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-97 Score=765.90 Aligned_cols=441 Identities=30% Similarity=0.449 Sum_probs=413.8
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+|+++|+++|+.||..|++++..+|.++|++++++|+++.++|+++++.|+|||+.+++. |+..++
T Consensus 23 tg~~i~~~~~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela~~~~~e~Gk~i~ea~~-ei~~~~ 101 (472)
T COG1012 23 TGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELAALITLETGKPISEARG-EIARAA 101 (472)
T ss_pred CCCEEeeecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHH
Confidence 5689999999999999999999999999999999999999999999999999999999999999999999975 799999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+++.... .+.. .....+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++.
T Consensus 102 ~~~~~~a~~~~~~~~~~-~~~~---~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apALaaGntVV~KPse~tp~sa~ 177 (472)
T COG1012 102 DFIRYYAEEARRLEGET-IPTD---KGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSAL 177 (472)
T ss_pred HHHHHHHHHHHHhcCCc-cCCC---CCcceEEEeecceEEEEECCCCCHHHHHHhhHHHHHHcCCEEEEECcccCcHHHH
Confidence 99999999998765543 2211 1557789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+++++.++ +|+|++|+|+| +.+.+++|+.|+ |++|+||||+++|+.|++.+++++||+++|||||||+||++|||+
T Consensus 178 ~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~~~k~~~lELGGk~p~IV~~dAdl 257 (472)
T COG1012 178 ALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKPVTLELGGKSPAIVLEDADL 257 (472)
T ss_pred HHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhhcCCcEEEECCCCCCeEECCCCCH
Confidence 999999888 99999999999 666899999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHh-hcCCC-CCCCCcccccCCHHHHHHHHHHHHHHH
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN-FYGKN-PLESKDLSRIVNSNHFARLSKLLDDDK 318 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~g~-~~~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (493)
|.|++.+++++| +|+||.|++.+|+|||+++||+|+++|.++ ++ +++|| .++.+++||+++++++++++++|+++.
T Consensus 258 ~~Av~~~~~g~f-~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~~Gpli~~~~~~~v~~~i~~a~ 335 (472)
T COG1012 258 DAAVDAAVFGAF-FNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAV 335 (472)
T ss_pred HHHHHHHHHHHH-hCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCccCCCCCHHHHHHHHHHHHHHH
Confidence 999999999999 999999999999999999999999999999 66 78899 678999999999999999999999997
Q ss_pred h-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 319 V-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 319 ~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
+ ++.++.||..+. |+|++|||+++++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|..++.++
T Consensus 336 ~~G~~~~~Gg~~~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lAN~t~yGL~a~v~t~d~~~~~~~ 414 (472)
T COG1012 336 AEGARLLAGGKRPG-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRV 414 (472)
T ss_pred HcCCEEEeCCcCCC-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 6 568888887444 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++|+|+||+...+...+.+||||+|.||+|+++|.+++++|++.|+|..+.
T Consensus 415 ~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~ 469 (472)
T COG1012 415 ARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKL 469 (472)
T ss_pred HhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEEec
Confidence 9999999999998754456778999999999999999999999999999998764
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-96 Score=767.83 Aligned_cols=442 Identities=20% Similarity=0.285 Sum_probs=412.4
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||+.+++ .|+..++
T Consensus 138 tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~ela~~~~~E~GKp~~ea~-~EV~~~i 216 (604)
T PLN02419 138 TQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLKDSH-GDIFRGL 216 (604)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++..+..+.+.. .+. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 217 ~~~~~~a~~a~~~~g~~-~~~--~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~ 293 (604)
T PLN02419 217 EVVEHACGMATLQMGEY-LPN--VSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASV 293 (604)
T ss_pred HHHHHHHHHHHHhhCCc-ccc--cCCCccceEEecCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHH
Confidence 99999999887765422 111 112345678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+++++.++ +|+|+||+|+|+.+.++.|+.|+ |++|+||||+++|+.|++.+++++||+++|+|||||+||++|||+|
T Consensus 294 ~l~~l~~eAGlP~GvvnvV~G~~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~~lk~v~LELGGknp~IV~~DADld 373 (604)
T PLN02419 294 ILAELAMEAGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPDANID 373 (604)
T ss_pred HHHHHHHHhCcCcceEEEEeCChHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHhccCCcEEEecCCCCeEEEcCCCCHH
Confidence 999999999 99999999999777889999984 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| +|+||.|++++|||||++ +|+|+++|.+++++++.|+| ++++++||++++.+++++.++|+++.+
T Consensus 374 ~Aa~~iv~g~f-~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~ 451 (604)
T PLN02419 374 ATLNALLAAGF-GAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDD 451 (604)
T ss_pred HHHHHHHHHHH-hhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHHhc
Confidence 99999999999 999999999999999999 99999999999999999988 578999999999999999999999965
Q ss_pred CCeEEeCCccC-----CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 320 SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 320 ~~~~~~gg~~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
|+++++||... ..|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++
T Consensus 452 GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dEAI~laN~s~yGLaasVfT~d~~~a 531 (604)
T PLN02419 452 GAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAA 531 (604)
T ss_pred CCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence 67999999642 2589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCC--CcchHHHHHHhhhccEEeEec
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G--~~~g~~~~~~~t~~k~v~~~~ 452 (493)
.++++++++|.|+||+.. +...+.+||||+|.||+| +++|.+++++||+.|+|+++.
T Consensus 532 ~~~a~~l~aG~V~IN~~~-~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~ 590 (604)
T PLN02419 532 RKFQMDIEAGQIGINVPI-PVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQKQ 590 (604)
T ss_pred HHHHHhCCeeeEEEcCCC-CCCCCCCCcCCcCcCCCCCCcccHHHHHHHhhCeEEEEEcc
Confidence 999999999999999864 334577999999999999 799999999999999998765
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-96 Score=763.26 Aligned_cols=440 Identities=23% Similarity=0.362 Sum_probs=410.0
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..++
T Consensus 35 tg~~v~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 113 (482)
T PRK11241 35 NGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAA 113 (482)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999996 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+...... ... ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.
T Consensus 114 ~~~~~~a~~~~~~~g~~-~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~ 190 (482)
T PRK11241 114 SFIEWFAEEGKRIYGDT-IPG--HQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSAL 190 (482)
T ss_pred HHHHHHHHHHHHhcCcc-ccc--CCCCceEEEEEeeceEEEEECCCcChHHHHHHHHHHHHHhCCEEEEECCCCChHHHH
Confidence 99999998776543221 111 111234578999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+.+++.++ +|+|++|+++| +.+.+..|++|+ ++.|+||||+++|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 191 ~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~~l~~~~lElGGknp~IV~~dADl 270 (482)
T PRK11241 191 ALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADL 270 (482)
T ss_pred HHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeEEEcCCCCH
Confidence 999999999 99999999999 567789999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| .|+||.|++++|||||+++||+|+++|.+++++++.|+| ++++++||++++.++++++++|+++.+
T Consensus 271 d~aa~~i~~~~f-~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 349 (482)
T PRK11241 271 DKAVEGALASKF-RNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALE 349 (482)
T ss_pred HHHHHHHHHHHH-hcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHh
Confidence 999999999999 999999999999999999999999999999999999988 478899999999999999999999965
Q ss_pred -CCeEEeCCccCC-CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 320 -SGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 320 -~~~~~~gg~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
++++++||..++ .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus 350 ~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~aN~s~~GL~a~Vft~d~~~a~~~ 429 (482)
T PRK11241 350 KGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRV 429 (482)
T ss_pred CCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHHhhCCCCCceEEEEcCCHHHHHHH
Confidence 679999997542 589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeE
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 450 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~ 450 (493)
++++++|.||||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|.+
T Consensus 430 ~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~ 480 (482)
T PRK11241 430 GEALEYGIVGINTGII--SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI 480 (482)
T ss_pred HHHcCccEEEECCCCC--CCCCCCcCCccccccCcccHHHHHHHhhcceEEEE
Confidence 9999999999998654 34578999999999999999999999999999865
|
|
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-95 Score=688.75 Aligned_cols=442 Identities=25% Similarity=0.375 Sum_probs=416.2
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
++|.|++++.++-++.+.|+++|.+||.+|+.++..+|.++|+++.+++.+|.++|+++++.|.|||+.|++ +||..+.
T Consensus 48 ~geii~~V~~~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~ddLa~iiTlE~GKpL~eA~-gEv~y~a 126 (503)
T KOG2451|consen 48 NGEIIGKVADMTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDDLATIITLENGKPLGEAK-GEVAYSA 126 (503)
T ss_pred ccchhhcccCCcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHHhhhcCCchhhcc-ceeehhH
Confidence 579999999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
.+++||+..+++.......+ ........+.++|+||+++|+|||||......+..+||++||+||+|||+.||++++
T Consensus 127 ~f~eWyAeEA~RvyGdii~s---~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gAALAaGCTvVvkPs~~TPlsaL 203 (503)
T KOG2451|consen 127 AFFEWYAEEARRVYGDIIPS---LNPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGAALAAGCTVVVKPSEDTPLSAL 203 (503)
T ss_pred HHHHHHHHHhhhhhccccCC---CCCCceEEEEeccceeEEEecCcCChHHHHHhHHHHHHhcCceEEEccCCCCchHHH
Confidence 99999999998876643221 123456678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCC----hHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCC
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGA----VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~----~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~d 237 (493)
.++++..++ +|+|++|+|+++ .+.+..|+.+| |+.|+||||+.+|+.++.+++.+.|++.+|||||.|+||++|
T Consensus 204 ala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~qsastvKkvslELGGNAPfIVFdd 283 (503)
T KOG2451|consen 204 ALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMAQSASTVKKVSLELGGNAPFIVFDD 283 (503)
T ss_pred HHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHHhhhhhhhheehhhcCCCceEEecC
Confidence 999999999 999999999963 36789999886 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
||+|.|++..+..+| .++||.|.+..|+|||++|||+|+.+|.++++++++||. ++.++.||+||+.+.+++..+++|
T Consensus 284 adld~Av~g~mA~KF-r~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~~~~tt~GpLIne~av~Kve~~v~D 362 (503)
T KOG2451|consen 284 ADLDQAVEGAMACKF-RNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGLDPGTTQGPLINEKAVEKVEKHVED 362 (503)
T ss_pred cCHHHHHHHHHHhhh-ccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCCCCCCccCCccCHHHHHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999999999999887 578999999999999999999999
Q ss_pred HHh-CCeEEeCCcc-CC-CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 317 DKV-SGKIVHGGER-DK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 317 a~~-~~~~~~gg~~-~~-~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
|.. ++++++||.. .+ +.+|++|||+.+|+.+|-+..||+|||+.+|.+|+|.||+|+++|+++.||++|+||+|..+
T Consensus 363 AvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdteeEvi~~ANdt~vGLAgYvfs~~~s~ 442 (503)
T KOG2451|consen 363 AVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEEEVIEWANDTRVGLAGYVFSNNLSR 442 (503)
T ss_pred HHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCHHHHHHHhccCccceeeEEeccCHHH
Confidence 975 6799999984 33 45999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
..+++++|++|+|-+|.... .....||||+|+||+||+++++|+++|+..|.+.+..
T Consensus 443 ~~rVae~LEvGmVGvNegli--s~~~~pFGGVKeSG~GREgskyGidey~~ik~icig~ 499 (503)
T KOG2451|consen 443 LFRVAEALEVGMVGVNEGLI--SDAEAPFGGVKESGFGREGSKYGIDEYLVIKYICIGT 499 (503)
T ss_pred HHHHHHHHhcceeeccccee--cccccCcCCccccccCccccccchhhhhhhheeeecC
Confidence 99999999999999998654 5678999999999999999999999999999998875
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-94 Score=751.40 Aligned_cols=441 Identities=23% Similarity=0.346 Sum_probs=410.0
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..++...|+..++
T Consensus 25 tg~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~ 104 (472)
T TIGR03374 25 TGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIV 104 (472)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999988656999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+.... ..... ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.
T Consensus 105 ~~~~~~a~~~~~~~~-~~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~ 181 (472)
T TIGR03374 105 DVFRFFAGAARCLSG-LAAGE--YLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTAL 181 (472)
T ss_pred HHHHHHHHHHHHhcC-cccCc--cCCCceEEEEEecceEEEEECCCCchHHHHHHHHHHHHhcCCEEEecCCCCCCHHHH
Confidence 999999887665432 11111 012335678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~alP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+++++.+++|+|++|+++| +.+.+..|+.|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|||+|
T Consensus 182 ~l~~l~~~~lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGk~p~iV~~dadl~ 261 (472)
T TIGR03374 182 KLAELAKDIFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIKRTHMELGGKAPVIVFDDADID 261 (472)
T ss_pred HHHHHHHHhCCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcccceEEecCCCCeeEECCCCCHH
Confidence 99999998899999999999 667899999995 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| +|+||.|++++|||||++++|+|+++|+++++++++|+| ++++++||++++.++++++++|+++.+
T Consensus 262 ~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~ 340 (472)
T TIGR03374 262 AVVEGVRTFGF-YNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKAL 340 (472)
T ss_pred HHHHHHHHHHH-hhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHc
Confidence 99999999999 999999999999999999999999999999999999998 478899999999999999999999876
Q ss_pred C-CeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 320 S-GKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 320 ~-~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
+ +++++||... ..|+|+.|||+.+++++|++++||+||||++|++|+|+|||++++|+++|||++||||+|.+++.++
T Consensus 341 G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~vft~d~~~~~~~ 420 (472)
T TIGR03374 341 GHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRL 420 (472)
T ss_pred CCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 4 4899999764 3589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeE
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 450 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~ 450 (493)
++++++|.|+||+... ..+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 421 ~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~ 471 (472)
T TIGR03374 421 SARLQYGCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMV 471 (472)
T ss_pred HHhCCcceEEECCCCC--CCCCCCCCCCccCccCccchHHHHHHhhceEEEEE
Confidence 9999999999998664 45779999999999999999999999999999865
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-95 Score=691.84 Aligned_cols=469 Identities=54% Similarity=0.909 Sum_probs=449.2
Q ss_pred HHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhcC
Q 011107 19 ASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMT 98 (493)
Q Consensus 19 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 98 (493)
+++.++++|.+|.+.+.-|.+.|..+|+++..++++|.++|.+++..|.+|+..++...|+...++.++++.+++.+|.+
T Consensus 4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~ 83 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVK 83 (477)
T ss_pred HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhcc
Confidence 45668999999999999999999999999999999999999999999999999999989999999999999999999999
Q ss_pred CcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhhcCCCcE
Q 011107 99 PEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI 178 (493)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~alP~g~v 178 (493)
++.......+...+.+++.+|+|||++|+|||||+.+.+.++++||+|||+||+|||+.+|.++..+++++-+.++.+++
T Consensus 84 ~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Yld~~~~ 163 (477)
T KOG2456|consen 84 PEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQYLDQDLI 163 (477)
T ss_pred ccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHhcCcceE
Confidence 98887766666778899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCChHhHHHHHhCCCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHHHHhhcccCCCC
Q 011107 179 RVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQ 258 (493)
Q Consensus 179 ~vv~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~~~~~~~~Gq 258 (493)
.||.|+.++..+|++|+.|.|.||||+.+|+.|+.+++++++||++|||||+|++|++|+|++-|++.|+|+++ +|+||
T Consensus 164 ~VV~Ggv~ETt~LL~~rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~-~N~GQ 242 (477)
T KOG2456|consen 164 RVVNGGVPETTELLKQRFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKW-MNSGQ 242 (477)
T ss_pred EEecCCCchHHHHHHhhccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhh-ccCCC
Confidence 99999988899999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred cccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCeEEeCCccCCCCceeec
Q 011107 259 ACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAP 338 (493)
Q Consensus 259 ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~P 338 (493)
.|.++++|+++.++++.++++++..++++.+.++.++.+++.++|..+++|+.+++++- ++++.||..+....|++|
T Consensus 243 tCvapDYiL~~k~~~~kli~alk~~l~eFYG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~---~kv~~Gg~~d~~d~~I~P 319 (477)
T KOG2456|consen 243 TCVAPDYILCSKSIQPKLIDALKSTLKEFYGENPKESKDLSRIINQRHFQRLSALLDET---GKVAIGGESDESDRYIAP 319 (477)
T ss_pred eeccCCeEEecHhhhHHHHHHHHHHHHHHhCCCccccccHHHHhhHHHHHHHHHHhcCC---CceecCCccchhhcccCC
Confidence 99999999999999999999999999999999999999999999999999999999842 899999999888889999
Q ss_pred eEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcccceEEEcCCCcccCCC
Q 011107 339 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVH 418 (493)
Q Consensus 339 tvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~ 418 (493)
||+.+|++++++|+||+|||||+|+.+++++|+|+.+|+.+-.|++|+||+|.+...|+.+++++|.|.+|+...|....
T Consensus 320 TIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~i~H~~~~ 399 (477)
T KOG2456|consen 320 TILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVNDVIMHVTLD 399 (477)
T ss_pred eEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecceEEEEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998898899
Q ss_pred CCCccCCCCCCCCCcchHHHHHHhhhccEEeEecCCCCC--CccCCCCchhHHHHHHHHHhhhhhHHHHHHhhhc
Q 011107 419 SLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDV--PVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWS 491 (493)
Q Consensus 419 ~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~~~~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (493)
.+||||+|.||+|++||++++++||+.|++..+.++.+. .+|||||+.+|.++++.+++......+...++++
T Consensus 400 ~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~rs~~~d~~~~~RYPP~S~~K~~~lr~~~~~~~~~~i~~~~~~~ 474 (477)
T KOG2456|consen 400 SLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLRSLGGDKLLALRYPPYSPQKLTLLRFLLESRLFQAILLSAGLL 474 (477)
T ss_pred ccCcCCcCccccccccccccccccccchhhhhcccccchhhhhcCCCCChHHHHHHHHHHHhHHHHHHHHhheeE
Confidence 999999999999999999999999999999988887777 8899999999999999999987777766666554
|
|
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-94 Score=739.13 Aligned_cols=446 Identities=50% Similarity=0.885 Sum_probs=412.7
Q ss_pred HHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhcCCc
Q 011107 21 LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100 (493)
Q Consensus 21 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 100 (493)
+.+++|++||+.|+.+|..+|.++|++++++|+++.++|+++++.|+|||..+++..|+..+++.+++++..++.+...+
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPK 81 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 57899999999999999999999999999999999999999999999999999975699999999999999888776543
Q ss_pred ccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhhcCCCcEEE
Q 011107 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRV 180 (493)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~alP~g~v~v 180 (493)
.........+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+++++.+++|+|++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~alP~gv~~~ 161 (449)
T cd07136 82 RVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEETFDEEYVAV 161 (449)
T ss_pred ccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHhCCCCEEEE
Confidence 22211111234568899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCChHhHHHHHhCCCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHHHHhhcccCCCCcc
Q 011107 181 VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 260 (493)
Q Consensus 181 v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~~~~~~~~Gq~C 260 (493)
++|+.+.+..|++|+++.|.||||+++|+.|++.+++++||+++|+|||||+||++|||+|.|++.+++++| .|+||.|
T Consensus 162 v~g~~~~~~~L~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~-~~~GQ~C 240 (449)
T cd07136 162 VEGGVEENQELLDQKFDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKF-LNAGQTC 240 (449)
T ss_pred EeCChHHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHH-cccCCcc
Confidence 999777889999778999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred cCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCeEEeCCccCCCCceeeceE
Q 011107 261 ISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTL 340 (493)
Q Consensus 261 ~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv 340 (493)
++++|||||++++|+|+++|+++++++++|+|.+++++||++++.+++++.+++++ +++++||..+.+|+|+.|||
T Consensus 241 ~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~i~~----a~~~~gG~~~~~g~~~~Ptv 316 (449)
T cd07136 241 VAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDN----GKIVFGGNTDRETLYIEPTI 316 (449)
T ss_pred cCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCCCCCccCcCCHHHHHHHHHHHhc----ceEEECCCcCCCCCEEeeEE
Confidence 99999999999999999999999999999988778899999999999999999986 38999997655689999999
Q ss_pred ecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcccceEEEcCCCcccCCCCC
Q 011107 341 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 420 (493)
Q Consensus 341 l~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~ 420 (493)
+++++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.|+||+.+.+...+.+
T Consensus 317 l~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~~ 396 (449)
T cd07136 317 LDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYL 396 (449)
T ss_pred EecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987654445789
Q ss_pred CccCCCCCCCCCcchHHHHHHhhhccEEeEecCCCCCCccCCCCchhHHHH
Q 011107 421 PFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRL 471 (493)
Q Consensus 421 p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~~~~~~~~~~~p~~~~~~~~ 471 (493)
||||+|.||+|+++|.+++++||+.|+|+++..+++.++.|+|++.++.++
T Consensus 397 PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~~~~~~~~~~~~~~~~ 447 (449)
T cd07136 397 PFGGVGNSGMGSYHGKYSFDTFSHKKSILKKSTWFDLPLRYPPYKGKKKKL 447 (449)
T ss_pred CccCcCcccCCcccCHHHHHHhccceEEEEcCCcCCccccCCCCchHHHhh
Confidence 999999999999999999999999999998765677899999998776654
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-93 Score=749.09 Aligned_cols=442 Identities=24% Similarity=0.359 Sum_probs=411.4
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (493)
.++++++++.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|++++++|++++++|+|||..+++..|+..
T Consensus 45 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~ 124 (501)
T PLN02766 45 TGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPA 124 (501)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 5789999999999999999999999997 59999999999999999999999999999999999999999886569999
Q ss_pred HHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
+++.+++++...+++.. +.... ......++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 125 ~~~~l~~~a~~~~~~~g-~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~ 200 (501)
T PLN02766 125 AAGLLRYYAGAADKIHG-ETLKM---SRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLS 200 (501)
T ss_pred HHHHHHHHHHHHHHhcC-ceecc---CCCceEEEEeccceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEeCCCCchHH
Confidence 99999999988776543 21111 112346788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHh-ccccchhhhcCCCCeEEEcCC
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~-~~~~~~~~elgG~~p~iV~~d 237 (493)
+..+.+++.++ +|+|++|+|+| +.+.+..|++|+ +|.|.||||+.+|+.|++.++ +++||+++|+|||||+||++|
T Consensus 201 ~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~l~~~~lElGGknp~iV~~d 280 (501)
T PLN02766 201 ALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDD 280 (501)
T ss_pred HHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhhcCCCeEEEECCCCCeEEECCC
Confidence 99999999999 99999999999 567789999995 999999999999999999998 589999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
||+|.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|+|. +++++||++++++++++.++|++
T Consensus 281 ADl~~Aa~~i~~g~f-~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~ 359 (501)
T PLN02766 281 ADVDMAVDLALLGIF-YNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEH 359 (501)
T ss_pred CCHHHHHHHHHHHHH-hhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999985 67899999999999999999999
Q ss_pred HHh-CCeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 317 DKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 317 a~~-~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
+.. ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++
T Consensus 360 a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~deai~~aN~~~~GL~a~Vft~d~~~a 439 (501)
T PLN02766 360 GKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVA 439 (501)
T ss_pred HHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 865 56999999753 4689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
.++++++++|+|+||+... ..+.+||||+|.||+|+++|++++++||+.|+|++..
T Consensus 440 ~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~ 495 (501)
T PLN02766 440 NTVSRSIRAGTIWVNCYFA--FDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTPL 495 (501)
T ss_pred HHHHHhCCcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence 9999999999999998653 5678999999999999999999999999999998764
|
|
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-93 Score=742.81 Aligned_cols=441 Identities=21% Similarity=0.345 Sum_probs=411.5
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++..+.+++++++++|++||+.|++++.++|.++|++++++|++++++|+++++.|+|||..+++ .|+..++
T Consensus 16 t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 94 (462)
T PRK13968 16 TGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQAR-AEVAKSA 94 (462)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999999996 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++.....+....... ..+...+++++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~tp~~~~ 170 (462)
T PRK13968 95 NLCDWYAEHGPAMLKAEPTL----VENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQ 170 (462)
T ss_pred HHHHHHHHHHHHhhCCcccc----CCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHH
Confidence 99999999887775433211 12345678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+.+++.++ +|+|++|+++|+.+.+..|+.|+ +|.|+||||+++|+.|++.+++++||+++|+|||||+||++|||+|
T Consensus 171 ~l~~~~~~aGlP~gv~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElGGk~p~iV~~dAdl~ 250 (462)
T PRK13968 171 LIAQVFKDAGIPQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLE 250 (462)
T ss_pred HHHHHHHHcCcCcCcEEEEecCchhhHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecCCCCceEECCCCCHH
Confidence 999999999 99999999998555566788885 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| +|+||.|++++|||||++++|+|+++|+++++++++|+|. +++++||+++..+++++.++++++..
T Consensus 251 ~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ 329 (462)
T PRK13968 251 LAVKAAVAGRY-QNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEATLAE 329 (462)
T ss_pred HHHHHHHHHHH-hccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHC
Confidence 99999999999 9999999999999999999999999999999999999885 67899999999999999999999865
Q ss_pred CCeEEeCCccCC-CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 011107 320 SGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (493)
Q Consensus 320 ~~~~~~gg~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 398 (493)
++++++||.... .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.+++
T Consensus 330 Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~d~~~a~~~~ 409 (462)
T PRK13968 330 GARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMA 409 (462)
T ss_pred CCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHH
Confidence 679999997543 4899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 399 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 399 ~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+++++|+|+||+... ..+.+||||+|.||+|+++|++++++||+.|+|++..
T Consensus 410 ~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~ 461 (462)
T PRK13968 410 ARLECGGVFINGYCA--SDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKDR 461 (462)
T ss_pred HhCCcceEEECCCCC--CCCCCCCCCccccccCcCchHHHHHHhcceeEEEEec
Confidence 999999999998653 4578999999999999999999999999999997753
|
|
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-93 Score=740.70 Aligned_cols=442 Identities=23% Similarity=0.366 Sum_probs=411.8
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++..+.+++++++++|++||..|+.+|.++|.++|++++++|++++++|++++++|+|||..++. .|+..++
T Consensus 10 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 88 (457)
T PRK09406 10 TGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAK-AEALKCA 88 (457)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999996 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++.++++......... .......+++++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~ 167 (457)
T PRK09406 89 KGFRYYAEHAEALLADEPADAA-AVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTAL 167 (457)
T ss_pred HHHHHHHHHHHHHhCCcccccc-CCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcCcHHHH
Confidence 9999999998887654322111 012235678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+.+++.++ +|+|+||+++++.+.+..|+.|+ ++.|+||||+++|+.|++.+++++||+++|+|||||+||++|||+|
T Consensus 168 ~l~~l~~~aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~~~~iV~~dadl~ 247 (457)
T PRK09406 168 YLADLFRRAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFIVMPSADLD 247 (457)
T ss_pred HHHHHHHHhCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCCCCeeEECCCCCHH
Confidence 999999999 99999999987656788899884 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|. +++++||++++.+++++.++++++.+
T Consensus 248 ~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ 326 (457)
T PRK09406 248 RAAETAVTARV-QNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAA 326 (457)
T ss_pred HHHHHHHHHHh-hCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999 9999999999999999999999999999999999999885 67899999999999999999999865
Q ss_pred CCeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 011107 320 SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (493)
Q Consensus 320 ~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 398 (493)
++++++||..+ ..|+|++|||+.+++++|.+++||+||||++|++|+|++||++++|+++|||+++|||+|.+.+++++
T Consensus 327 Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~ 406 (457)
T PRK09406 327 GATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFI 406 (457)
T ss_pred CCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 67999999764 36899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeE
Q 011107 399 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 450 (493)
Q Consensus 399 ~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~ 450 (493)
+++++|+|+||+.+. ..+.+||||+|.||+|+++|.+++++||+.|+|.+
T Consensus 407 ~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 407 DDLEAGQVFINGMTV--SYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWI 456 (457)
T ss_pred HhCCcceEEECCCCC--CCCCCCCCCccccccCccchHHHHHHhhceEEEEe
Confidence 999999999998764 45779999999999999999999999999999864
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-93 Score=741.88 Aligned_cols=444 Identities=22% Similarity=0.332 Sum_probs=409.1
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (493)
+++++++++.++.+|+++++++|++||. .|+.+|.++|.++|++++++|++++++|++++++|+|||..++...|+..
T Consensus 30 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~ 109 (486)
T cd07140 30 DGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGM 109 (486)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 5789999999999999999999999998 59999999999999999999999999999999999999999986569999
Q ss_pred HHHHHHHHHHHHHhhcCCccccccc-ccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchH
Q 011107 82 LKTSIKSALKELKHWMTPEKAKTSI-TTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~ 160 (493)
+++.+++++...+...... .+... .......+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.
T Consensus 110 ~~~~l~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~ 188 (486)
T cd07140 110 SIQTFRYFAGWCDKIQGKT-IPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPL 188 (486)
T ss_pred HHHHHHHHHHHHHHhcCcc-ccccccCCCCceEEEEeeccceEEEEcCCchHHHHHHHHHHHHHHhCCEEEEECCccCcH
Confidence 9999999998777653221 11100 001123578899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhc-cccchhhhcCCCCeEEEcC
Q 011107 161 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDS 236 (493)
Q Consensus 161 ~~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~-~~~~~~~elgG~~p~iV~~ 236 (493)
++..+++++.++ +|+|++|+|+| +.+.+..|+.|+ |+.|+||||+++|+.|++.++. ++||+++|+|||||+||++
T Consensus 189 ~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~l~~v~lElGGk~~~iV~~ 268 (486)
T cd07140 189 TALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVSNLKKVSLELGGKSPLIIFA 268 (486)
T ss_pred HHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCCeEEEEcCCCCceEECC
Confidence 999999999999 99999999998 556789999996 9999999999999999999996 8999999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 011107 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (493)
Q Consensus 237 daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~ 315 (493)
|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|. +++++||++++++++++.++|+
T Consensus 269 dadl~~a~~~i~~~~~-~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~ 347 (486)
T cd07140 269 DCDMDKAVRMGMSSVF-FNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCE 347 (486)
T ss_pred CCCHHHHHHHHHHHHH-hccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCCCCCcCCCCcCHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999999999999999985 6899999999999999999999
Q ss_pred HHHh-CCeEEeCCcc-CCCCceeeceEecCCCCCCcccccccccceeeeEeeC--CHHHHHHHHhcCCCCcEEEEecCCH
Q 011107 316 DDKV-SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTNNK 391 (493)
Q Consensus 316 ~a~~-~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~ 391 (493)
++.+ ++++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+ |++|||+++|+++|||++||||+|.
T Consensus 348 ~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~aN~~~~gL~a~vft~d~ 427 (486)
T cd07140 348 RGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDI 427 (486)
T ss_pred HHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCCHHHHHHHHhCCCcCceEEEECCCH
Confidence 9965 6799999975 3468999999999999999999999999999999998 6999999999999999999999999
Q ss_pred HHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 392 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 392 ~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|+|++.
T Consensus 428 ~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 485 (486)
T cd07140 428 NKALYVSDKLEAGTVFVNTYNK--TDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTVTIE 485 (486)
T ss_pred HHHHHHHHhCCcceEEECCCCC--CCCCCCcCCcccCcCCCcchHHHHHHhhcEEEEEEe
Confidence 9999999999999999998653 456789999999999999999999999999999763
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-93 Score=742.68 Aligned_cols=444 Identities=25% Similarity=0.370 Sum_probs=409.8
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhh-cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFAS-GKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
.++++++++.++.+|+++++++|++||+. |+++|.++|.++|++++++|++++++|++++++|+|||..+++..|+..+
T Consensus 24 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~ 103 (477)
T cd07113 24 TEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQS 103 (477)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 57899999999999999999999999985 99999999999999999999999999999999999999999865599999
Q ss_pred HHHHHHHHHHHHhhcCCcccccccc---cCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCch
Q 011107 83 KTSIKSALKELKHWMTPEKAKTSIT---TFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAP 159 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~ 159 (493)
++.++++++........ ....... ......+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|
T Consensus 104 ~~~l~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKPs~~tp 182 (477)
T cd07113 104 ANFLRYFAGWATKINGE-TLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTP 182 (477)
T ss_pred HHHHHHHHHHHHHhcCc-ccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCCCCc
Confidence 99999998776654322 1111000 1123457899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCC
Q 011107 160 ASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 160 ~~~~~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~d 237 (493)
.++..+.+++.++ +|+|+||+++|+.+.+..|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++|
T Consensus 183 ~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGkn~~iV~~d 262 (477)
T cd07113 183 LTLLRVAELAKEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIGRQAASDLTRVTLELGGKNAAAFLKD 262 (477)
T ss_pred HHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhhcCceEeecCCCCeeEECCC
Confidence 9999999999998 99999999999555889999996 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
||+|.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|+|. +++++||++++.+++++.++|++
T Consensus 263 Adl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 341 (477)
T cd07113 263 ADIDWVVEGLLTAGF-LHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDD 341 (477)
T ss_pred CCHHHHHHHHHHHHH-hhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999985 68899999999999999999999
Q ss_pred HHh-CCeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 317 DKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 317 a~~-~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
+.+ ++++++||... ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++
T Consensus 342 a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~~ 421 (477)
T cd07113 342 ARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKA 421 (477)
T ss_pred HHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 865 67999999753 3589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
.++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 422 ~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 476 (477)
T cd07113 422 LRYIPRIEAGTVWVNMHTF--LDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMIR 476 (477)
T ss_pred HHHHHhCCcceEEECCCCC--CCCCCCCCCCccccCCccchHHHHHHhhceEEEEEe
Confidence 9999999999999997653 457899999999999999999999999999999764
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-92 Score=739.58 Aligned_cols=440 Identities=26% Similarity=0.395 Sum_probs=410.1
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+|+++++++|++||..|+.+|.++|.++|++++++|++++++|+++++.|+|||..+++..|+..++
T Consensus 25 t~~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~i 104 (475)
T cd07117 25 NGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAA 104 (475)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999766999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++..++..... ... . ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.
T Consensus 105 ~~l~~~a~~~~~~~~~-~~~--~-~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~AL~aGN~VvlKPs~~~p~~~~ 180 (475)
T cd07117 105 DHFRYFAGVIRAEEGS-ANM--I-DEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLL 180 (475)
T ss_pred HHHHHHHHHHHHhcCc-ccc--c-CCCceeEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccCcHHHH
Confidence 9999998877654321 111 1 12334678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~alP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+++++.+++|+|++|+|+| +.+.+..|++|+ +|.|+||||+++|+.|.+.++++++|+++|+|||||+||++|||++
T Consensus 181 ~l~~~~~~~lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dADl~ 260 (475)
T cd07117 181 ELAKIIQDVLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLIPATLELGGKSANIIFDDANWD 260 (475)
T ss_pred HHHHHHHHhCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEEeCCCCCeEEECCCCChH
Confidence 99999999999999999998 567889999996 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| +|+||.|++++|||||++++|+|+++|.++++++++|+| ++++++||++++.+++++.++++++.+
T Consensus 261 ~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~ 339 (475)
T cd07117 261 KALEGAQLGIL-FNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEE 339 (475)
T ss_pred HHHHHHHHHHh-hccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCcCCHHHHHHHHHHHHHHHHC
Confidence 99999999999 999999999999999999999999999999999999998 478899999999999999999999865
Q ss_pred CCeEEeCCccC-----CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 320 SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 320 ~~~~~~gg~~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+++
T Consensus 340 Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~ 419 (475)
T cd07117 340 GAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRA 419 (475)
T ss_pred CCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHH
Confidence 67999999753 2588999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeE
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 450 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~ 450 (493)
.++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|++
T Consensus 420 ~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~ 473 (475)
T cd07117 420 LRVARAVETGRVWVNTYNQ--IPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYI 473 (475)
T ss_pred HHHHHhCCcceEEECCCCC--CCCCCCCCCCccCcCCCCchHHHHHHHhCeEEEEE
Confidence 9999999999999998553 45789999999999999999999999999999875
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-92 Score=740.94 Aligned_cols=442 Identities=26% Similarity=0.387 Sum_probs=411.0
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..++. .|+..++
T Consensus 49 tg~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~i 127 (498)
T PLN02278 49 TGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAI-GEVAYGA 127 (498)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999996 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+.+.+. ..+. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 128 ~~~~~~~~~~~~~~g~-~~~~--~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~ 204 (498)
T PLN02278 128 SFLEYFAEEAKRVYGD-IIPS--PFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTAL 204 (498)
T ss_pred HHHHHHHHHHHHhcCc-cccc--CCCCceEEEEeecccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 9999999988776432 1111 112334577899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+.+++.++ +|+|++|+|+|+ .+.+..|+.|+ +|.|+||||+++|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 205 ~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl 284 (498)
T PLN02278 205 AAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAATVKRVSLELGGNAPFIVFDDADL 284 (498)
T ss_pred HHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhhcCCcEEEecCCCCeeEECCCCCH
Confidence 999999998 999999999984 46789999995 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+|. +++++||++++.+++++.++|+++.+
T Consensus 285 ~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 363 (498)
T PLN02278 285 DVAVKGALASKF-RNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVS 363 (498)
T ss_pred HHHHHHHHHHHh-ccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHh
Confidence 999999999999 9999999999999999999999999999999999988884 68899999999999999999999865
Q ss_pred -CCeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 320 -SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 320 -~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
++++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++
T Consensus 364 ~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~ 443 (498)
T PLN02278 364 KGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRV 443 (498)
T ss_pred CCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 67999999763 3589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++|.|+||+... ..+.+||||+|.||+|+++|++++++||+.|+|.+++
T Consensus 444 ~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~~ 496 (498)
T PLN02278 444 SEALEYGIVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGIDEYLEIKYVCLGN 496 (498)
T ss_pred HHhCCcCeEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHhheeEEEEEec
Confidence 9999999999998664 3467899999999999999999999999999997654
|
|
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-92 Score=737.54 Aligned_cols=441 Identities=25% Similarity=0.376 Sum_probs=410.9
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+|+++++++|++||..|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++..|+..++
T Consensus 25 t~~~~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 104 (480)
T cd07559 25 NGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAI 104 (480)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999998766999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++..++...... .. ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.
T Consensus 105 ~~~~~~a~~~~~~~~~~-~~---~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~ 180 (480)
T cd07559 105 DHFRYFAGVIRAQEGSL-SE---IDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSIL 180 (480)
T ss_pred HHHHHHHHHHHHhcCcc-cc---CCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECchhhhHHHH
Confidence 99999988876543211 11 112345678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCC---
Q 011107 164 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI--- 238 (493)
Q Consensus 164 ~l~~~l~~alP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~da--- 238 (493)
.+++++.+++|+|++|+++| +.+.++.|++|+ ++.|+||||+++|+.|++.+++++||+++|+|||||+||++||
T Consensus 181 ~l~~l~~~~lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~p~~lElGGk~p~iV~~dA~~~ 260 (480)
T cd07559 181 VLMELIGDLLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENLIPVTLELGGKSPNIFFDDAMDA 260 (480)
T ss_pred HHHHHHHHhCCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEeccCCCCeEEEcCCcccc
Confidence 99999999999999999999 567889999995 9999999999999999999999999999999999999999999
Q ss_pred --CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 011107 239 --NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (493)
Q Consensus 239 --Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~ 315 (493)
|+|.|++.+++++| +|+||.|++++|||||++++|+|+++|++++++++.|+|. +++++||++++++++++.++|+
T Consensus 261 ~~Dl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~ 339 (480)
T cd07559 261 DDDFDDKAEEGQLGFA-FNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVD 339 (480)
T ss_pred ccCHHHHHHHHHHHHH-hhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999985 7889999999999999999999
Q ss_pred HHHh-CCeEEeCCccC-----CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecC
Q 011107 316 DDKV-SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 389 (493)
Q Consensus 316 ~a~~-~~~~~~gg~~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~ 389 (493)
++.. ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+
T Consensus 340 ~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~ 419 (480)
T cd07559 340 IGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTR 419 (480)
T ss_pred HHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECC
Confidence 9865 67999999763 25899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 390 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 390 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
|.+++.++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 420 d~~~a~~~a~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 479 (480)
T cd07559 420 DINRALRVARGIQTGRVWVNCYHQ--YPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNILVS 479 (480)
T ss_pred CHHHHHHHHHhcCcceEEECCCCC--CCCCCCcCCCccCcCCccChHHHHHHhhceEEEEEe
Confidence 999999999999999999997543 457899999999999999999999999999999764
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-92 Score=736.63 Aligned_cols=445 Identities=28% Similarity=0.432 Sum_probs=412.7
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHh-----hhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTF-----ASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYE 78 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~-----~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~e 78 (493)
+++++++++..+.+|+++++++|++|| ..|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|
T Consensus 32 t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~e 110 (503)
T PLN02467 32 TEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAA-WD 110 (503)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HH
Confidence 478999999999999999999999999 899999999999999999999999999999999999999999997 59
Q ss_pred HHHHHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCc
Q 011107 79 VALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVA 158 (493)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~ 158 (493)
+..+++.+++++...+++.................+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+
T Consensus 111 v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~Vv~Kps~~t 190 (503)
T PLN02467 111 MDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELA 190 (503)
T ss_pred HHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCcC
Confidence 99999999999988887644321111111112346789999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEc
Q 011107 159 PASSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235 (493)
Q Consensus 159 ~~~~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~ 235 (493)
|.++..+++++.++ +|+|++|+++| +.+.++.|+.|+ ++.|+||||+.+|+.|++.+++++||+++|+|||||+||+
T Consensus 191 p~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~~~iV~ 270 (503)
T PLN02467 191 SVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIMTAAAQMVKPVSLELGGKSPIIVF 270 (503)
T ss_pred cHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhccCCcEEEECCCCCceEEC
Confidence 99999999999999 99999999999 567889999996 9999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHH
Q 011107 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLL 314 (493)
Q Consensus 236 ~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i 314 (493)
+|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|.+++++++.|+|. +++++||++++.+++++.+++
T Consensus 271 ~dADl~~A~~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~v 349 (503)
T PLN02467 271 DDVDLDKAVEWAMFGCF-WTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFI 349 (503)
T ss_pred CCCCHHHHHHHHHHHHH-hhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999999999999999999999985 688999999999999999999
Q ss_pred HHHHh-CCeEEeCCccC---CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCC
Q 011107 315 DDDKV-SGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390 (493)
Q Consensus 315 ~~a~~-~~~~~~gg~~~---~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 390 (493)
+++.. ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|
T Consensus 350 ~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d 429 (503)
T PLN02467 350 STAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISND 429 (503)
T ss_pred HHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCC
Confidence 99865 67999999753 258899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 391 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 391 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
.+.+.++++++++|+|+||++.. ..+.+||||+|.||+|+++|++++++||+.|+|....
T Consensus 430 ~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~~ 489 (503)
T PLN02467 430 LERCERVSEAFQAGIVWINCSQP--CFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTKYI 489 (503)
T ss_pred HHHHHHHHHhCCcceEEECCCCC--CCCCCCcCCcccCcCCCcchHHHHHHhhCeEEEEEec
Confidence 99999999999999999998653 4567999999999999999999999999999998863
|
|
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-92 Score=737.01 Aligned_cols=444 Identities=23% Similarity=0.344 Sum_probs=409.2
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhh-cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFAS-GKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
.++++++++.++.+++++++++|++||.. |+++|.++|.++|++++++|+++.++|++++++|+|||..++...|+..+
T Consensus 23 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~ 102 (481)
T TIGR03216 23 DGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRG 102 (481)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHhHHHHHHH
Confidence 57899999999999999999999999997 99999999999999999999999999999999999999998865699999
Q ss_pred HHHHHHHHHHHHhhcCCccccccc-ccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 83 KTSIKSALKELKHWMTPEKAKTSI-TTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
++.++++++.++.... ....... ...+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 103 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~~~ALaaGN~vvlKPs~~tp~t 181 (481)
T TIGR03216 103 AANFRVFADVVKNAPT-ECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGT 181 (481)
T ss_pred HHHHHHHHHHHHHhcC-ccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence 9999999988765432 1111100 1112345788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeC-Ch-HhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCC
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEG-AV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g-~~-~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~d 237 (493)
+.++.+++.++ +|+|++|+++| +. +.+..|+.|+ +|.|+||||+.+|+.|++.+++++||+++|+|||||+||++|
T Consensus 182 ~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~~aa~~~~~~~lElgG~n~~iV~~d 261 (481)
T TIGR03216 182 ATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAADGVKPVSFELGGKNAAIVFAD 261 (481)
T ss_pred HHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhcCCCeEEEECCCCCeEEECCC
Confidence 99999999999 99999999998 44 4678888885 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
||+|.|++.+++++| .|+||.|+++++||||++++|+|+++|.+++++++.|+|. +++++||++++.+++++++++++
T Consensus 262 adl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~ 340 (481)
T TIGR03216 262 CDFDAAVAGILRSAF-LNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYAL 340 (481)
T ss_pred CCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999885 68999999999999999999999
Q ss_pred HHh-CCeEEeCCccC------CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecC
Q 011107 317 DKV-SGKIVHGGERD------KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 389 (493)
Q Consensus 317 a~~-~~~~~~gg~~~------~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~ 389 (493)
+.+ ++++++||..+ .+|+|++|||+++++++|++++||+||||++|++|+|++|||+++|+++|||++||||+
T Consensus 341 a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gL~~~v~t~ 420 (481)
T TIGR03216 341 AVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTE 420 (481)
T ss_pred HHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEECC
Confidence 865 67999999753 25899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 390 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 390 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
|.+.++++++++++|.|+||++..+ .+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 421 d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~~~ 480 (481)
T TIGR03216 421 DLSRAHRVARQMEVGIVWVNSWFLR--DLRTPFGGSKLSGIGREGGVHSLEFYTELTNVCIK 480 (481)
T ss_pred CHHHHHHHHHhcCccEEEECCCCCC--CCCCCcCCcccCcCCcCchHHHHHHhhceEEEEEe
Confidence 9999999999999999999987653 57799999999999999999999999999999763
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-92 Score=740.05 Aligned_cols=442 Identities=26% Similarity=0.365 Sum_probs=408.9
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (493)
+++++++++..+.+|+++|+++|++||+ .|+.++.++|.++|++++++|++++++|++++++|+|||..+++..|+..
T Consensus 82 tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~~~~a~~~Ev~~ 161 (538)
T PLN02466 82 TGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPM 161 (538)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 5889999999999999999999999997 49999999999999999999999999999999999999999986569999
Q ss_pred HHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
+++.+++++...++.... ..+. ......++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+
T Consensus 162 ~~~~l~~~a~~~~~~~g~-~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs~~tp~~ 237 (538)
T PLN02466 162 FARLFRYYAGWADKIHGL-TVPA---DGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 237 (538)
T ss_pred HHHHHHHHHHHHHHhcCc-cccc---CCCceEEEEEecceEEEEECCCchHHHHHHHHHhHHHHcCCEEEeECCCCCcHH
Confidence 999999998776654321 1111 112345789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhc-cccchhhhcCCCCeEEEcCC
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~-~~~~~~~elgG~~p~iV~~d 237 (493)
+..+++++.++ +|+|+||+|+| +.+.+..|++|+ +|.|.||||+++|+.|++.++. ++||+++|+|||||+||++|
T Consensus 238 ~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa~~~l~pv~lElGGknp~iV~~d 317 (538)
T PLN02466 238 ALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCED 317 (538)
T ss_pred HHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCCcEEEEcCCCCeEEEcCC
Confidence 99999999999 99999999999 556788999985 9999999999999999999884 89999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
||+|.|++.+++++| +|+||.|++++|||||+++||+|+++|+++..+++.|+| ++++++||++++.+++++++++++
T Consensus 318 ADl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~v~~ 396 (538)
T PLN02466 318 ADVDKAVELAHFALF-FNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKS 396 (538)
T ss_pred CCHHHHHHHHHHHHH-hhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCCccCCCHHHHHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999999999998888 578999999999999999999999
Q ss_pred HHh-CCeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 317 DKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 317 a~~-~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
+.+ ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++
T Consensus 397 a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deAi~~aN~~~~GL~a~VfT~d~~~a 476 (538)
T PLN02466 397 GVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTA 476 (538)
T ss_pred HHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHH
Confidence 865 66999999763 3588999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
.++++++++|+|+||++.. ..+.+||||+|.||+|+++|++++++||+.|+|++..
T Consensus 477 ~~~~~~l~aG~v~IN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~ 532 (538)
T PLN02466 477 NTLSRALRVGTVWVNCFDV--FDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPL 532 (538)
T ss_pred HHHHHhCCeeeEEECCCCC--CCCCCCcCCCCcCccCcccHHHHHHHhcceEEEEEeC
Confidence 9999999999999997543 4577999999999999999999999999999997754
|
|
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-92 Score=735.34 Aligned_cols=442 Identities=18% Similarity=0.230 Sum_probs=405.9
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++|+++|++||+.|+++|.++|.++|++++++|+++.++|+++++.|+|||..+++ .|+..++
T Consensus 43 t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~GK~~~~a~-~ev~~~i 121 (508)
T PLN02315 43 NNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKILAEGI-GEVQEII 121 (508)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 468999999999999999999999999999999999999999999999999999999999999999999996 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++..++.+.+. ..+. .......++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.
T Consensus 122 ~~~~~~~~~~~~l~~~-~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~ 198 (508)
T PLN02315 122 DMCDFAVGLSRQLNGS-IIPS--ERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198 (508)
T ss_pred HHHHHHHHHHHHhcCc-cccC--CCCCceeEEEEecceEEEEECCCcchHHHHHHHHhHHHHcCCEEEeeCCCcChHHHH
Confidence 9999999877665332 1111 111234467899999999999999999999999999999999999999999999988
Q ss_pred H----HHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCC
Q 011107 164 L----LAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 164 ~----l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~d 237 (493)
. +.+++.++ +|+|++|+++|+.+.+..|+.|+ ++.|.||||+++|+.|++.++++++|+++|+|||||+||++|
T Consensus 199 ~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~~~aa~~~~~~~lElgGknp~iV~~d 278 (508)
T PLN02315 199 AMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNARFGKCLLELSGNNAIIVMDD 278 (508)
T ss_pred HHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEecCCCCeEEECCC
Confidence 7 56777888 99999999998777889999985 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|. +++++||++++.+++++.+++++
T Consensus 279 ADl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~ 357 (508)
T PLN02315 279 ADIQLAVRSVLFAAV-GTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEI 357 (508)
T ss_pred CCHHHHHHHHHHHHH-HhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999985 67899999999999999999999
Q ss_pred HHh-CCeEEeCCcc-CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 317 DKV-SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 317 a~~-~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
+.+ ++++++||.. +..|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+
T Consensus 358 a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~a~Vft~d~~~a 436 (508)
T PLN02315 358 IKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETI 436 (508)
T ss_pred HHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHH
Confidence 965 6799999975 336899999999 5999999999999999999999999999999999999999999999999999
Q ss_pred HHHHh--hcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 395 QQFVE--TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 395 ~~~~~--~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+++++ ++++|.||||++..+ ..+.+||||+|.||+|+++|.+++++||+.|+|++..
T Consensus 437 ~~~~~~~~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~ 495 (508)
T PLN02315 437 FKWIGPLGSDCGIVNVNIPTNG-AEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495 (508)
T ss_pred HHHhhhcccceeEEEEcCCCCC-CCCCCCCCccccccCCccchHHHHHHHhhEEEEEEec
Confidence 99985 799999999985432 4567899999999999999999999999999988763
|
|
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-91 Score=736.96 Aligned_cols=442 Identities=25% Similarity=0.352 Sum_probs=410.9
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++|++.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++..|+..++
T Consensus 31 tg~~i~~~~~~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~ 110 (488)
T PRK13252 31 TGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGA 110 (488)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999998766999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++........ .... .. .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 111 ~~l~~~~~~~~~~~g-~~~~--~~-~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~t~~ 186 (488)
T PRK13252 111 DVLEYYAGLAPALEG-EQIP--LR-GGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTAL 186 (488)
T ss_pred HHHHHHHHHHHHhcC-ceec--cC-CCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCeEEEeCCccCcHHHH
Confidence 999999987765422 1111 11 2334678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+++++.++ +|+|+||+++|+.+.++.|+.|+ +|.|+||||+++|+.|.+.++.+++|+++|+|||||+||++|||++
T Consensus 187 ~l~~~~~~aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa~~l~~~~lElgG~~p~iV~~dAdl~ 266 (488)
T PRK13252 187 KLAEIYTEAGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAASLKEVTMELGGKSPLIVFDDADLD 266 (488)
T ss_pred HHHHHHHHcCcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEEcCCCCeeEECCCCCHH
Confidence 999999999 99999999999656889999996 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+|. +++++||++++.++++++++++++.+
T Consensus 267 ~A~~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 345 (488)
T PRK13252 267 RAADIAMLANF-YSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAE 345 (488)
T ss_pred HHHHHHHHHHH-hhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHC
Confidence 99999999999 9999999999999999999999999999999999999885 68899999999999999999999865
Q ss_pred CCeEEeCCccC-----CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 320 SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 320 ~~~~~~gg~~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++
T Consensus 346 Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~I~t~d~~~~ 425 (488)
T PRK13252 346 GARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRA 425 (488)
T ss_pred CCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCCeEEEEeCCHHHH
Confidence 67999999642 2589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|+|++..
T Consensus 426 ~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~~ 481 (488)
T PRK13252 426 HRVIHQLEAGICWINTWGE--SPAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQVEM 481 (488)
T ss_pred HHHHHhcCccEEEECCCCC--CCCCCCCCCCccCcCCcCChHHHHHHhcceEEEEEeC
Confidence 9999999999999998543 4567899999999999999999999999999998753
|
|
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-91 Score=729.24 Aligned_cols=440 Identities=23% Similarity=0.334 Sum_probs=408.7
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.+|++++++..+.+|+++++++|++||..|+.+|.++|.++|++++++|+++.++|++++++|+|||..++. .|+..++
T Consensus 6 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 84 (456)
T cd07107 6 TGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAML-GDVMVAA 84 (456)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999985 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+.+ ..+..+. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 85 ~~l~~~a~~~~~~-~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~ 160 (456)
T cd07107 85 ALLDYFAGLVTEL-KGETIPV---GGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSAL 160 (456)
T ss_pred HHHHHHHHHHHHh-CCccccC---CCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHHH
Confidence 9999998766543 3222221 12335678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEYMDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~alP~g~v~vv~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+++++.+++|+|+||+++|+ .+.+..|++|+ ++.|.||||+++|+.|++.++++++|+++|+|||||+||++|||+|
T Consensus 161 ~l~~~~~~~lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dadl~ 240 (456)
T cd07107 161 RLAELAREVLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFPDADPE 240 (456)
T ss_pred HHHHHHHHhCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCeEEECCCCCHH
Confidence 999999999999999999984 45789999996 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 242 VACRRMIMGK-WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 242 ~Aa~~i~~~~-~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
.|++.+++++ | .|+||.|++++|||||+++||+|+++|++++++++.|+|. +++++||++++.+++++.++|+++..
T Consensus 241 ~Aa~~i~~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 319 (456)
T cd07107 241 AAADAAVAGMNF-TWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKR 319 (456)
T ss_pred HHHHHHHHhchh-hcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHHHHH
Confidence 9999999995 8 8999999999999999999999999999999999999985 68899999999999999999999865
Q ss_pred -CCeEEeCCccC-----CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 320 -SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 320 -~~~~~~gg~~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++
T Consensus 320 ~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~ 399 (456)
T cd07107 320 EGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQ 399 (456)
T ss_pred CCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECCCHHH
Confidence 67999999652 248899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++++++|+|+||++.. ..+.+||||+|.||+|+++|++++++||+.|+|+++
T Consensus 400 ~~~~~~~l~~G~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 455 (456)
T cd07107 400 AHRTARRVEAGYVWINGSSR--HFLGAPFGGVKNSGIGREECLEELLSYTQEKNVNVR 455 (456)
T ss_pred HHHHHHhcCcCEEEECCCCC--CCCCCCcCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 99999999999999998765 356899999999999999999999999999999763
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-91 Score=732.54 Aligned_cols=443 Identities=22% Similarity=0.342 Sum_probs=412.2
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+++++++++|++||..|+.+|.++|.++|++++++|++++++|++++++|+|||..++...|+..++
T Consensus 26 t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 105 (475)
T PRK13473 26 TGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIV 105 (475)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999888656999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+.+....... ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 106 ~~~~~~a~~~~~~~g~~~~~---~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKps~~~p~~~~ 182 (475)
T PRK13473 106 DVFRFFAGAARCLEGKAAGE---YLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTAL 182 (475)
T ss_pred HHHHHHHHHHHHhcCccccc---CCCCceeEEEEecceeEEEEccCChHHHHHHHHHHHHHhcCCEEEEECCCCChHHHH
Confidence 99999988776653321111 012334578899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~alP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+.+++.+++|+|++|+++| +.+.+..|++|+ +|.|+||||+++|+.|++.++++++|+++|+|||||+||++|||+|
T Consensus 183 ~l~~~~~~alP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dADld 262 (475)
T PRK13473 183 KLAELAADILPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADSVKRTHLELGGKAPVIVFDDADLD 262 (475)
T ss_pred HHHHHHHHhCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECCCCCHH
Confidence 99999999999999999999 678899999995 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| +|+||.|++++|||||++++|+|+++|++++++++.|+|. +++++||++++.+++++.++|+++.+
T Consensus 263 ~Aa~~i~~~~f-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 341 (475)
T PRK13473 263 AVVEGIRTFGY-YNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKAL 341 (475)
T ss_pred HHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHc
Confidence 99999999999 9999999999999999999999999999999999999885 78899999999999999999999865
Q ss_pred C-CeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 320 S-GKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 320 ~-~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
+ +++++||... ..|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++
T Consensus 342 G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~ 421 (475)
T PRK13473 342 GHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRV 421 (475)
T ss_pred CCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 4 6999999764 3588999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|+|++++
T Consensus 422 ~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~~~ 474 (475)
T PRK13473 422 SARLQYGCTWVNTHFM--LVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMVKH 474 (475)
T ss_pred HHhCCcceEEECCCCC--CCCCCCCCCccccccCccchHHHHHHHhceEEEEEec
Confidence 9999999999998765 3567999999999999999999999999999998764
|
|
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-91 Score=727.99 Aligned_cols=436 Identities=25% Similarity=0.390 Sum_probs=405.7
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.++++.++++|++|++.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..++
T Consensus 6 tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~ 84 (448)
T TIGR01780 6 TGEIIGTVPDQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAK-GEILYAA 84 (448)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 588999999999999999999999999999999999999999999999999999999999999999999996 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+++.... .+. ...+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 85 ~~l~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~ 161 (448)
T TIGR01780 85 SFLEWFAEEAKRVYGDT-IPS--PQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSAL 161 (448)
T ss_pred HHHHHHHHHHHHhcCcc-ccC--CCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHHH
Confidence 99999888776654321 111 112334567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCC--hHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCC
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGA--VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~--~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daD 239 (493)
.+++++.++ +|+|++|+++|+ .+.+..|++|+ ++.|+||||+.+|+.|++.++.++||+++|+|||||+||++|||
T Consensus 162 ~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~~~iV~~dad 241 (448)
T TIGR01780 162 ALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFDDAD 241 (448)
T ss_pred HHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCCCC
Confidence 999999999 999999999985 56789999995 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHH
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (493)
+|.|++.+++++| .|+||.|++++|||||+++||+|+++|.+++++++.|+|. +++++||++++.+++++.++|++++
T Consensus 242 l~~aa~~iv~~~f-~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~ 320 (448)
T TIGR01780 242 IDQAVEGAMASKF-RNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAV 320 (448)
T ss_pred HHHHHHHHHHHHH-HhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999884 7899999999999999999999986
Q ss_pred h-CCeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHH
Q 011107 319 V-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396 (493)
Q Consensus 319 ~-~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 396 (493)
+ ++++++||..+ .+|+|++|||+.+++++|++++||+||||++|++|+|++||++++|+++|||+++|||+|.+.+++
T Consensus 321 ~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~~~~~ 400 (448)
T TIGR01780 321 EKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLATIWR 400 (448)
T ss_pred HCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHH
Confidence 5 67999999764 358899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhcc
Q 011107 397 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 446 (493)
Q Consensus 397 ~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k 446 (493)
+++++++|.|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|
T Consensus 401 ~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 401 VAEALEYGMVGINTGLI--SNVVAPFGGVKQSGLGREGSKYGIEEYLETK 448 (448)
T ss_pred HHHhCCccEEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHHhccC
Confidence 99999999999998754 4567899999999999999999999999875
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-91 Score=720.21 Aligned_cols=428 Identities=66% Similarity=1.059 Sum_probs=398.2
Q ss_pred HHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhcCCc
Q 011107 21 LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100 (493)
Q Consensus 21 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 100 (493)
+++++|++||..|+.+|.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++..+..+..+.
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 82 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPE 82 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 58999999999999999999999999999999999999999999999999998865699999999999999887765442
Q ss_pred ccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhhcCCCcEEE
Q 011107 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRV 180 (493)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~alP~g~v~v 180 (493)
.........+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.+++|+|++|+
T Consensus 83 ~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~~P~gvv~~ 162 (432)
T cd07137 83 KVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEYLDTKAIKV 162 (432)
T ss_pred ccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHhCCcCeEEE
Confidence 21111111233567899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCChHhHHHHHhCCCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHHHHhhccc-CCCCc
Q 011107 181 VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC-NNGQA 259 (493)
Q Consensus 181 v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~~~~~~-~~Gq~ 259 (493)
++|+.+.+..|++|+++.|+||||+++|+.|.+.+++++||+++|+|||||+||++|||+|.|++.+++++| . |+||.
T Consensus 163 v~g~~~~~~~L~~~~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f-~~~~GQ~ 241 (432)
T cd07137 163 IEGGVPETTALLEQKWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKW-GCNNGQA 241 (432)
T ss_pred EeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhh-hccCCCc
Confidence 999777889999888999999999999999999999999999999999999999999999999999999998 7 99999
Q ss_pred ccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCeEEeCCccCCCCceeece
Q 011107 260 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPT 339 (493)
Q Consensus 260 C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Pt 339 (493)
|++++|+|||++++|+|+++|.++++++++|+|++++++||++++++++++.++++++..++++++||..+.+|+|++||
T Consensus 242 C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~ga~~l~gg~~~~~g~~~~Pt 321 (432)
T cd07137 242 CIAPDYVLVEESFAPTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSVADKIVHGGERDEKNLYIEPT 321 (432)
T ss_pred ccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCCCccCCcCCcCCHHHHHHHHHHHHHHHhCCeEEeCCCcCCCCCEEeeE
Confidence 99999999999999999999999999999999987889999999999999999999998788999999765568999999
Q ss_pred EecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcccceEEEcCCCcccCCCC
Q 011107 340 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHS 419 (493)
Q Consensus 340 vl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~ 419 (493)
|+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|.|+||++..+...+.
T Consensus 322 vl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~ 401 (432)
T cd07137 322 ILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDT 401 (432)
T ss_pred EEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCccccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998765445578
Q ss_pred CCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 420 LPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 420 ~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 402 ~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~ 431 (432)
T cd07137 402 LPFGGVGESGFGAYHGKFSFDAFSHKKAVL 431 (432)
T ss_pred CCCCCcCcCcCCccccHHHHHHhccCceee
Confidence 999999999999999999999999999875
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-91 Score=731.80 Aligned_cols=439 Identities=27% Similarity=0.390 Sum_probs=407.2
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhh--cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFAS--GKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (493)
.+|++++++.++.+|+++++++|++||+. |+.+|.++|.++|++++++|+++.++|++++++|+|||..+++..|+..
T Consensus 28 t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 107 (476)
T cd07142 28 NGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPL 107 (476)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 47899999999999999999999999975 9999999999999999999999999999999999999999986569999
Q ss_pred HHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
+++.+++++...+..... ... .......++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 108 ~~~~l~~~a~~~~~~~g~-~~~---~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~ 183 (476)
T cd07142 108 AARLFRYYAGWADKIHGM-TLP---ADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLS 183 (476)
T ss_pred HHHHHHHHHHHHHHhcCc-ccc---cCCCceEEEEEeceeeEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcccHH
Confidence 999999998776654321 111 1112345788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhc-cccchhhhcCCCCeEEEcCC
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~-~~~~~~~elgG~~p~iV~~d 237 (493)
+..+++++.++ +|+|++|+++| +.+.+..|+.|+ ++.|+||||+++|+.|++.+++ +++|+++|+|||||+||++|
T Consensus 184 ~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa~~~~~~v~lElgGk~p~iV~~d 263 (476)
T cd07142 184 ALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAKSNLKPVTLELGGKSPFIVCED 263 (476)
T ss_pred HHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHHcCCCeEEEECCCCCeeEECCC
Confidence 99999999999 99999999999 556788999985 9999999999999999999986 89999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|.+++.+++.|+|. +++++||++++.+++++.+++++
T Consensus 264 ADl~~Aa~~i~~~~f-~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~v~~ 342 (476)
T cd07142 264 ADVDKAVELAHFALF-FNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEH 342 (476)
T ss_pred CCHHHHHHHHHHHHh-cCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCcCcCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999885 67899999999999999999999
Q ss_pred HHh-CCeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 317 DKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 317 a~~-~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
+.+ ++++++||... ..|+|+.|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++
T Consensus 343 a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~a 422 (476)
T cd07142 343 GKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTA 422 (476)
T ss_pred HHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 865 66999999763 3688999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
.++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 423 ~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 475 (476)
T cd07142 423 NTLSRALKAGTVWVNCYDV--FDASIPFGGYKMSGIGREKGIYALNNYLQVKAVV 475 (476)
T ss_pred HHHHHhCCcceEEECCCCC--CCCCCCCCCCccCcCCccchHHHHHHhhheeEEe
Confidence 9999999999999997643 5678999999999999999999999999999985
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-91 Score=733.66 Aligned_cols=441 Identities=24% Similarity=0.372 Sum_probs=411.5
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+++++++++|++|+..|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..++
T Consensus 25 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~ 103 (488)
T TIGR02299 25 TNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTR-QQVIRAA 103 (488)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHH-HHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++.+.++......+. .....+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~ 179 (488)
T TIGR02299 104 ENFRFFADKCEEAMDGRTYPV----DTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAA 179 (488)
T ss_pred HHHHHHHHhHHHhcCCccccC----CCceEEEEEEecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECchhchHHHH
Confidence 999999988875544332221 1234578899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+.+++.++ +|+|+||+++| +.+.++.|+.|+ +|.|.||||+++|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 180 ~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~~l~~~~lElGGknp~iV~~dAdl 259 (488)
T TIGR02299 180 RLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLKRFSMELGGKSPVIVFDDADL 259 (488)
T ss_pred HHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCeEEEEcCCCCeEEECCCCCH
Confidence 999999999 99999999998 667788999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|. +++++||++++.+++++.++++++.+
T Consensus 260 ~~A~~~i~~~~~-~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 338 (488)
T TIGR02299 260 ERALDAVVFMIF-SFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEK 338 (488)
T ss_pred HHHHHHHHHHHH-hccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence 999999999999 9999999999999999999999999999999999999985 67899999999999999999999865
Q ss_pred -CCeEEeCCccC--------CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCC
Q 011107 320 -SGKIVHGGERD--------KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390 (493)
Q Consensus 320 -~~~~~~gg~~~--------~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 390 (493)
++++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|
T Consensus 339 ~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d 418 (488)
T TIGR02299 339 EGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTND 418 (488)
T ss_pred CCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 67999998652 248899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 391 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 391 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
.+.++++++++++|+|+||+... ..+.+||||+|.||+|+++|.+++++||+.|+|+++.
T Consensus 419 ~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~~ 478 (488)
T TIGR02299 419 VGRAHRVALALEAGMIWVNSQNV--RHLPTPFGGVKASGIGREGGTYSFDFYTETKNVALAL 478 (488)
T ss_pred HHHHHHHHHhCCcCeEEECCCCC--CCCCCCCCCCccCcCCccchHHHHHHHhceEEEEEec
Confidence 99999999999999999998664 4567899999999999999999999999999998764
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-91 Score=721.28 Aligned_cols=440 Identities=50% Similarity=0.871 Sum_probs=404.9
Q ss_pred HHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhcCCc
Q 011107 21 LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100 (493)
Q Consensus 21 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 100 (493)
+++++|++||..|+.+|..+|.++|++++++|++++++|++++++|+|||..++...|+..+++.++++++.++.+....
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPE 81 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 57899999999999999999999999999999999999999999999999999876799999999999999988876543
Q ss_pred ccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhhcCCCcEEE
Q 011107 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRV 180 (493)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~alP~g~v~v 180 (493)
.............++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.+++|+|++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~lp~gv~~v 161 (443)
T cd07132 82 PVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKYLDKECYPV 161 (443)
T ss_pred cCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCcCeEEE
Confidence 22211111234568899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCChHhHHHHHhCCCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHHHHhhcccCCCCcc
Q 011107 181 VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 260 (493)
Q Consensus 181 v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~~~~~~~~Gq~C 260 (493)
++|+.+.+..|+++.+|.|+||||+++|+.|.+.+++++||+++|+|||||+||++|||++.|++.+++++| +|+||.|
T Consensus 162 v~g~~~~~~~l~~~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f-~~~GQ~C 240 (443)
T cd07132 162 VLGGVEETTELLKQRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKF-INAGQTC 240 (443)
T ss_pred EeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHH-hcCCCce
Confidence 999777777888778999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred cCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCeEEeCCccCCCCceeeceE
Q 011107 261 ISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTL 340 (493)
Q Consensus 261 ~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv 340 (493)
++++|||||++++|+|+++|.++++++++++|++++++||++++++++++.+++++ +++++||..+.+++|++|||
T Consensus 241 ~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~v~~~i~~----a~~~~gg~~~~~~~~~~Ptv 316 (443)
T cd07132 241 IAPDYVLCTPEVQEKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLSG----GKVAIGGQTDEKERYIAPTV 316 (443)
T ss_pred eCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCCCcccccCCcCCHHHHHHHHHHHhC----CEEEeCCccCCCCCEEeeEE
Confidence 99999999999999999999999999998888888999999999999999999974 48999997655689999999
Q ss_pred ecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcccceEEEcCCCcccCCCCC
Q 011107 341 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 420 (493)
Q Consensus 341 l~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~ 420 (493)
+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+.++++++++|.|+||++..+...+.+
T Consensus 317 l~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~ 396 (443)
T cd07132 317 LTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSL 396 (443)
T ss_pred EeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987655455789
Q ss_pred CccCCCCCCCCCcchHHHHHHhhhccEEeEecCCCCC--CccCCCCc
Q 011107 421 PFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDV--PVRYPPYT 465 (493)
Q Consensus 421 p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~~~~~~--~~~~~p~~ 465 (493)
||||+|.||+|+++|.+++++|++.|+|++++..... +++|+||+
T Consensus 397 PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~~~~~~~~~~~~~~~~ 443 (443)
T cd07132 397 PFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKSLNMEKLNSLRYPPYS 443 (443)
T ss_pred CCCCCCcccCCCcccHHHHHHhccccEEEEccccccccccccCCCCC
Confidence 9999999999999999999999999999877632233 77888874
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-91 Score=727.03 Aligned_cols=442 Identities=22% Similarity=0.362 Sum_probs=410.5
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||..|+.+|.++|.++|++++++|+++.++|++++++|+|||..++. .|+..++
T Consensus 5 tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~ev~~~~ 83 (454)
T cd07101 5 TGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAF-EEVLDVA 83 (454)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHH-HHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999999985 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++..+.++..+........ .....+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~ 162 (454)
T cd07101 84 IVARYYARRAERLLKPRRRRGAIP-VLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTAL 162 (454)
T ss_pred HHHHHHHHHHHHHhCCccccccCC-CCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 999999999888776543222111 1235688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCCCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+.+++.++ +|+|++|+++| +.+.+..|++| ++.|.||||+++|+.|++.++++++|+++|+|||||+||++|||+|
T Consensus 163 ~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~-~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dAdl~ 241 (454)
T cd07101 163 WAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN-ADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVLEDADLD 241 (454)
T ss_pred HHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEEECCCCCHH
Confidence 999999999 99999999999 56778888886 6899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+| ++++++||+++++++++++++++++.+
T Consensus 242 ~a~~~i~~~~~-~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~~~ 320 (454)
T cd07101 242 KAAAGAVRACF-SNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAK 320 (454)
T ss_pred HHHHHHHHHHH-hcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHC
Confidence 99999999999 999999999999999999999999999999999998887 478899999999999999999999865
Q ss_pred CCeEEeCCccC--CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 320 SGKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 320 ~~~~~~gg~~~--~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
++++++||... ..++|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++
T Consensus 321 Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~ 400 (454)
T cd07101 321 GATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRI 400 (454)
T ss_pred CCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 67999998642 2478999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcc-cCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 398 VETVSAGGLVINDTAVH-LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~-~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
++++++|+|+||++..+ ...+.+||||+|.||+|+++|++++++||+.|+|.
T Consensus 401 ~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 453 (454)
T cd07101 401 AARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVA 453 (454)
T ss_pred HHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEe
Confidence 99999999999986553 34567899999999999999999999999999985
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-91 Score=730.18 Aligned_cols=440 Identities=26% Similarity=0.393 Sum_probs=410.0
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++|++.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..++
T Consensus 24 ~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 102 (473)
T cd07097 24 TSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEELARLLTREEGKTLPEAR-GEVTRAG 102 (473)
T ss_pred CCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 378999999999999999999999999999999999999999999999999999999999999999999997 4999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+++.... ... ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 103 ~~l~~~a~~~~~~~g~~-~~~--~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~ALaaGN~VIlKps~~~p~~~~ 179 (473)
T cd07097 103 QIFRYYAGEALRLSGET-LPS--TRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAW 179 (473)
T ss_pred HHHHHHHHHHHHhcCcc-ccc--CCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHH
Confidence 99999998877664322 111 112344678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+.+++.++ +|+|++|+++| +.+.+..|+.|+ ++.|.||||+.+|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 180 ~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dadl 259 (473)
T cd07097 180 ALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGARVQLEMGGKNPLVVLDDADL 259 (473)
T ss_pred HHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEEECCCCCeeEECCCCCH
Confidence 999999999 99999999999 456889999995 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
+.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|+|. +++++||++++.+++++.++++++++
T Consensus 260 ~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 338 (473)
T cd07097 260 DLAVECAVQGAF-FSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARS 338 (473)
T ss_pred HHHHHHHHHHHH-hccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999884 78899999999999999999999865
Q ss_pred -CCeEEeCCccC---CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 011107 320 -SGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (493)
Q Consensus 320 -~~~~~~gg~~~---~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 395 (493)
++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++||++++|+++|||+++|||+|.++++
T Consensus 339 ~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~ 418 (473)
T cd07097 339 EGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHAT 418 (473)
T ss_pred CCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHH
Confidence 67999999753 24789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCC-CcchHHHHHHhhhccEEe
Q 011107 396 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 396 ~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G-~~~g~~~~~~~t~~k~v~ 449 (493)
++++++++|+|+||+++.+ ..+.+||||+|.||+| +++|.+++++||+.|+|.
T Consensus 419 ~~~~~l~~g~v~iN~~~~~-~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v~ 472 (473)
T cd07097 419 HFKRRVEAGVVMVNLPTAG-VDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTVY 472 (473)
T ss_pred HHHHhCCcCeEEECCCCCC-CCCCCCCCCcccccCcccCCcHHHHHHhhceeEEe
Confidence 9999999999999986544 3467999999999999 899999999999999985
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-91 Score=729.84 Aligned_cols=442 Identities=24% Similarity=0.312 Sum_probs=409.0
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|++.++++|++|++.|+.+|.++|.++|++++++|+++.++|+++++.|+|||..+++ .|+..++
T Consensus 25 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~ev~~~~ 103 (478)
T cd07085 25 TGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELARLITLEHGKTLADAR-GDVLRGL 103 (478)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999996 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+.. ..+..... ..+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 104 ~~~~~~~~~~~~~-~g~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~tp~~~~ 180 (478)
T cd07085 104 EVVEFACSIPHLL-KGEYLENV--ARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAM 180 (478)
T ss_pred HHHHHHHHHHHHh-CCeecccC--CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHH
Confidence 9999988765543 22222110 12334688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+++++.++ +|+|++|+++|+.+.+..|++|+ ++.|+||||+++|+.|++.+++++||+++|+|||||+||++|||+|
T Consensus 181 ~l~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dADl~ 260 (478)
T cd07085 181 RLAELLQEAGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKRVQALGGAKNHAVVMPDADLE 260 (478)
T ss_pred HHHHHHHHhCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCcEEecCCCCCceEECCCCCHH
Confidence 999999998 99999999999778899999996 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++++.|+| ++++++||++++.+++++.++|+++.+
T Consensus 261 ~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 339 (478)
T cd07085 261 QTANALVGAAF-GAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEE 339 (478)
T ss_pred HHHHHHHHHHH-hcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999 999999999999999999999999999999999999988 478999999999999999999999865
Q ss_pred CCeEEeCCccC-----CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 320 SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 320 ~~~~~~gg~~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
++++++||... .+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++
T Consensus 340 Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~ 419 (478)
T cd07085 340 GAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAA 419 (478)
T ss_pred CCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 67999998642 3589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCC--CcchHHHHHHhhhccEEeEe
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G--~~~g~~~~~~~t~~k~v~~~ 451 (493)
+++++++++|+|+||++.. ...+.+||||+|.||+| +++|++++++||+.|+|++.
T Consensus 420 ~~~~~~l~~G~v~iN~~~~-~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~~~ 477 (478)
T cd07085 420 RKFQREVDAGMVGINVPIP-VPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSR 477 (478)
T ss_pred HHHHHhCCcceEEEcCCCC-CCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEEEe
Confidence 9999999999999998643 34567999999999999 57899999999999999764
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-91 Score=734.73 Aligned_cols=442 Identities=23% Similarity=0.348 Sum_probs=413.8
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+++++++++|++||..|+.+|..+|.++|++++++|++++++|++++++|+|||..+++ .|+..++
T Consensus 56 ~~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~-~ev~~~i 134 (512)
T cd07124 56 PSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLRRRRFELAAWMVLEVGKNWAEAD-ADVAEAI 134 (512)
T ss_pred CCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCcCHHHHH-HHHHHHH
Confidence 378999999999999999999999999999999999999999999999999999999999999999999997 4999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++..++++.. +.... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 135 ~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~ 210 (512)
T cd07124 135 DFLEYYAREMLRLRG-FPVEM---VPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAA 210 (512)
T ss_pred HHHHHHHHHHHHhcC-ccccC---CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHH
Confidence 999999999887732 22211 12345688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhc------cccchhhhcCCCCeEEE
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK------HLTPVLLELGGKSPVVF 234 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~------~~~~~~~elgG~~p~iV 234 (493)
.+.+++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+++|+.|.+.+++ ++||+++|+|||||+||
T Consensus 211 ~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV 290 (512)
T cd07124 211 KLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIV 290 (512)
T ss_pred HHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCeEEE
Confidence 999999998 99999999999 557789999995 9999999999999999999886 68999999999999999
Q ss_pred cCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHH
Q 011107 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKL 313 (493)
Q Consensus 235 ~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~ 313 (493)
++|||+|.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|. +++++||++++.+++++.++
T Consensus 291 ~~daDl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~ 369 (512)
T cd07124 291 DEDADLDEAAEGIVRSAF-GFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRY 369 (512)
T ss_pred CCCCCHHHHHHHHHHHHH-hhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999999999999999985 67899999999999999999
Q ss_pred HHHHHhCCeEEeCCccCC---CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCC
Q 011107 314 LDDDKVSGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390 (493)
Q Consensus 314 i~~a~~~~~~~~gg~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 390 (493)
|+++..++++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 370 i~~a~~g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d 449 (512)
T cd07124 370 IEIGKSEGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRS 449 (512)
T ss_pred HHHHHhCCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCC
Confidence 999977889999997654 58999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCC-CcchHHHHHHhhhccEEeEe
Q 011107 391 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 391 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G-~~~g~~~~~~~t~~k~v~~~ 451 (493)
.+.+.++++++++|+|+||+.+.+...+.+||||+|.||+| +++|.+++++||+.|+|.++
T Consensus 450 ~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~~t~~k~v~~~ 511 (512)
T cd07124 450 PEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKTVTEN 511 (512)
T ss_pred HHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHHhccEEEEEEe
Confidence 99999999999999999998776555577999999999999 78899999999999999765
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-91 Score=727.28 Aligned_cols=442 Identities=28% Similarity=0.437 Sum_probs=410.8
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++..+.+++++++++|++||..|+.+|.++|.++|++++++|+++.++|+++++.|+|||..++. .|+..++
T Consensus 6 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~ 84 (456)
T cd07110 6 TEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAA-WDVDDVA 84 (456)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999986 4999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++.++.+.............+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~ 164 (456)
T cd07110 85 GCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTEL 164 (456)
T ss_pred HHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccchHHHH
Confidence 99999999888764211111111112345678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+.+++.++ +|+|+||+++| +.+.+..|++|+ ++.|.||||+.+|+.|++.++++++|+++|+|||||+||++|||+
T Consensus 165 ~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~~iV~~dadl 244 (456)
T cd07110 165 ELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFDDADL 244 (456)
T ss_pred HHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCeeEECCCCCH
Confidence 999999999 99999999999 556789999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| +|+||.|+++++||||++++|+|+++|++++++++.|+|. +++++||++++.+++++.++++++..
T Consensus 245 ~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~a~~ 323 (456)
T cd07110 245 EKAVEWAMFGCF-WNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKE 323 (456)
T ss_pred HHHHHHHHHHHH-hcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHh
Confidence 999999999999 9999999999999999999999999999999999999985 68999999999999999999999865
Q ss_pred -CCeEEeCCccC---CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 011107 320 -SGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (493)
Q Consensus 320 -~~~~~~gg~~~---~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 395 (493)
++++++||..+ ..|+|+.|||+.+++++|+++++|+||||++|++|+|+|||++++|+++|||+++|||+|.++++
T Consensus 324 ~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~ 403 (456)
T cd07110 324 EGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCD 403 (456)
T ss_pred CCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHH
Confidence 66999999764 35889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 396 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 396 ~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
++++++++|+|+||++.. ..+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 404 ~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 404 RVAEALEAGIVWINCSQP--CFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT 455 (456)
T ss_pred HHHHhCCcceEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence 999999999999998653 4678999999999999999999999999999985
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-91 Score=726.87 Aligned_cols=444 Identities=30% Similarity=0.472 Sum_probs=415.9
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++..+.+++++++++|++|+..|+.+|.++|.++|++++++|++++++|++++++|+|||..++. .|+..++
T Consensus 5 t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~-~ev~~~~ 83 (453)
T cd07099 5 TGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAG-LEVLLAL 83 (453)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999875 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++.+.++...+.........+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++.
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~~~~ 163 (453)
T cd07099 84 EAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGE 163 (453)
T ss_pred HHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 99999999988876544332111112446688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCCCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV 242 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~ 242 (493)
.|.+++.++ +|+|++|+++|+.+.+..|++|++|.|+||||+++|+.|.+.++++++|+++|+|||||+||++|||++.
T Consensus 164 ~l~~~l~~ag~P~g~~~vv~g~~~~~~~l~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dadl~~ 243 (453)
T cd07099 164 LLAEAWAAAGPPQGVLQVVTGDGATGAALIDAGVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLADADLER 243 (453)
T ss_pred HHHHHHHHcCCCCCeEEEEeCCchHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECCCCCHHH
Confidence 999999999 9999999999966888999988899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-C
Q 011107 243 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV-S 320 (493)
Q Consensus 243 Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~-~ 320 (493)
|++.+++++| .|+||.|+++++||||++++|+|+++|++++++++.|+|. +++++||++++.+++++.++++++.+ +
T Consensus 244 a~~~i~~~~~-~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~g 322 (453)
T cd07099 244 AAAAAVWGAM-VNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKG 322 (453)
T ss_pred HHHHHHHHHH-hcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCC
Confidence 9999999999 9999999999999999999999999999999999988884 78999999999999999999999865 6
Q ss_pred CeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHh
Q 011107 321 GKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 399 (493)
Q Consensus 321 ~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 399 (493)
+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++
T Consensus 323 a~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~ 402 (453)
T cd07099 323 AKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIAR 402 (453)
T ss_pred CEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHH
Confidence 7999999765 468999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 400 TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 400 ~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
++++|.|+||+.+.+...+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 403 ~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 403 RLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452 (453)
T ss_pred hCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence 99999999999876666788999999999999999999999999999985
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-91 Score=719.29 Aligned_cols=433 Identities=47% Similarity=0.809 Sum_probs=403.0
Q ss_pred CCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHH
Q 011107 14 FDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKEL 93 (493)
Q Consensus 14 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~ 93 (493)
.+.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|+++++.|+|||..+++..|+..+++.+++++..+
T Consensus 2 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~ 81 (436)
T cd07135 2 TPLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNL 81 (436)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999986569999999999999988
Q ss_pred HhhcCCcccccc-cccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhh
Q 011107 94 KHWMTPEKAKTS-ITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY 172 (493)
Q Consensus 94 ~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~a 172 (493)
+++...+..... ........++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~~ 161 (436)
T cd07135 82 KKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKY 161 (436)
T ss_pred HHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHh
Confidence 877543322211 1112345688999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEEEeCChHhHHHHHhCCCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHHHHhhc
Q 011107 173 MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKW 252 (493)
Q Consensus 173 lP~g~v~vv~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~~~~ 252 (493)
+|+|++|+++|+.+....|+.|++|.|.||||+.+|+.|++.+++++||+++|+|||||+||++|||+|.|++.+++++|
T Consensus 162 lP~g~v~vv~g~~~~~~~l~~~~vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~~~~ 241 (436)
T cd07135 162 LDPDAFQVVQGGVPETTALLEQKFDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILWGKF 241 (436)
T ss_pred CCcCEEEEEcCCchhHHHHHhCCCCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHHHHHHHh
Confidence 99999999999656566788888999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCeEEeCCccCCC
Q 011107 253 GCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKN 332 (493)
Q Consensus 253 ~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~ 332 (493)
+|+||.|+++++||||++++|+|+++|+++++++++|+|++++++||++++++++++.++++++ ++++++||..+..
T Consensus 242 -~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~v~~a--g~~v~~gg~~~~~ 318 (436)
T cd07135 242 -GNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTT--KGKVVIGGEMDEA 318 (436)
T ss_pred -ccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCCCCCHHHHHHHHHHHHhc--CCeEEECCCcCCC
Confidence 9999999999999999999999999999999999999887788999999999999999999977 7899999977667
Q ss_pred CceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcccceEEEcCCC
Q 011107 333 KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA 412 (493)
Q Consensus 333 g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~ 412 (493)
|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||+.+
T Consensus 319 g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~ 398 (436)
T cd07135 319 TRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTL 398 (436)
T ss_pred CCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeEEECCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred cccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 413 VHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 413 ~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
.+...+.+||||+|.||+|+++|.+++++||+.|+|.
T Consensus 399 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 399 IHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV 435 (436)
T ss_pred ccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence 6555678999999999999999999999999999873
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-91 Score=733.03 Aligned_cols=443 Identities=22% Similarity=0.340 Sum_probs=412.1
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++|++.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..++
T Consensus 56 ~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~ 134 (511)
T TIGR01237 56 PSEVVGKVGKASVEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRRHELNALICLEVGKIIPEAD-AEVAEAI 134 (511)
T ss_pred CCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999999987 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++.++.+.+... .. ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.
T Consensus 135 ~~~~~~a~~~~~~~~~~~-~~--~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~ 211 (511)
T TIGR01237 135 DFCEYYAREMERLAGQGV-NL--DIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTVAPIVTGNCVVLKPAETSTVIAA 211 (511)
T ss_pred HHHHHHHHHHHHhcCccc-cC--CCCCceeEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 999999998887754221 11 112345678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHh------ccccchhhhcCCCCeEEE
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPVVF 234 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~------~~~~~~~~elgG~~p~iV 234 (493)
.+++++.++ +|+|+||+++| +.+.+..|+.|+ ++.|.||||+++|+.|++.++ ++++|+++|+|||||+||
T Consensus 212 ~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~~~~~~lElgG~~p~iV 291 (511)
T TIGR01237 212 KIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDAAKVQPGQKHLKRVIAEMGGKDAIIV 291 (511)
T ss_pred HHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHHhcccccccccceeEeccCCCCeEEE
Confidence 999999998 99999999999 567899999995 999999999999999999887 588999999999999999
Q ss_pred cCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHH
Q 011107 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKL 313 (493)
Q Consensus 235 ~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~ 313 (493)
++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|.+++++++.|+|. +++++||++++.+++++.++
T Consensus 292 ~~dAdl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~~~~~~~~~gpli~~~~~~~v~~~ 370 (511)
T TIGR01237 292 DESADIEQAVAGAVYSAF-GFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNVGPTDDPSTQVGPVIDQKSQAKIQEY 370 (511)
T ss_pred CCCCCHHHHHHHHHHHHH-hcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999999999999988885 68899999999999999999
Q ss_pred HHHHHhCCeEEeCCccCC-CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 011107 314 LDDDKVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (493)
Q Consensus 314 i~~a~~~~~~~~gg~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~ 392 (493)
++++.+.+++++||.... .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 371 i~~a~~~g~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~ 450 (511)
T TIGR01237 371 IEQGKAEGELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAADFDEALEIANGTEYGLTGGVYSNTRD 450 (511)
T ss_pred HHHHHHCCcEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHH
Confidence 999977778999986533 5899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCC-cchHHHHHHhhhccEEeEe
Q 011107 393 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 393 ~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~-~~g~~~~~~~t~~k~v~~~ 451 (493)
+++++++++++|+|+||++..+...+.+||||+|.||+|+ .+|++++++||+.|+|..+
T Consensus 451 ~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~v~~~ 510 (511)
T TIGR01237 451 HIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQPKTVTEN 510 (511)
T ss_pred HHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhcceEEEEEe
Confidence 9999999999999999997765555678999999999996 6899999999999999764
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-91 Score=728.65 Aligned_cols=442 Identities=21% Similarity=0.301 Sum_probs=411.1
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+++++++++|++|+..|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..++
T Consensus 22 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 100 (478)
T cd07086 22 NGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGRLVSLEMGKILPEGL-GEVQEMI 100 (478)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999987 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+.+... .... ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.
T Consensus 101 ~~~~~~a~~~~~~~g~-~~~~--~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~ 177 (478)
T cd07086 101 DICDYAVGLSRMLYGL-TIPS--ERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAI 177 (478)
T ss_pred HHHHHHHHHHHHhcCc-cccc--CCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCeEEEECCCcchHHHH
Confidence 9999999887765332 1111 111335678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-----cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCC
Q 011107 164 LLAKLVGEY-----MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 164 ~l~~~l~~a-----lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~d 237 (493)
.+++++.++ +|+|++|+++|+.+.+..|++|+ +|.|.||||+++|+.|++.++++++|+++|+|||||+||++|
T Consensus 178 ~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~p~iV~~d 257 (478)
T cd07086 178 AVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRFGRVLLELGGNNAIIVMDD 257 (478)
T ss_pred HHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEeecCCCCcEEEcCC
Confidence 999999987 89999999999656888889886 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
||++.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|+|. +++++||++++.+++++++++++
T Consensus 258 Adl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~ 336 (478)
T cd07086 258 ADLDLAVRAVLFAAV-GTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEI 336 (478)
T ss_pred CCHHHHHHHHHHHHH-hccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999985 67899999999999999999999
Q ss_pred HHh-CCeEEeCCccCC---CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 011107 317 DKV-SGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (493)
Q Consensus 317 a~~-~~~~~~gg~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~ 392 (493)
+.+ ++++++||.... .|+|++|||+++++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 337 a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~ 416 (478)
T cd07086 337 AKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLR 416 (478)
T ss_pred HHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHH
Confidence 965 679999997643 5889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh--cccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 393 LKQQFVET--VSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 393 ~~~~~~~~--l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++++ +++|+|+||+++.+ ..+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 417 ~a~~~~~~~~~~~G~v~iN~~~~~-~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~~~ 476 (478)
T cd07086 417 EAFRWLGPKGSDCGIVNVNIPTSG-AEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN 476 (478)
T ss_pred HHHHHHhcCcccceeEEECCCCCC-CCCCCCCCCcccccCCccchHHHHHHhhceEEEEEe
Confidence 99999999 99999999987654 457899999999999999999999999999999865
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-91 Score=725.28 Aligned_cols=443 Identities=26% Similarity=0.396 Sum_probs=412.4
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcC-CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGK-TKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
.+|++++++.++.+|+++++++|++||..|+ ++|..+|.++|++++++|+++.++|++++++|+|||..++...|+..+
T Consensus 6 tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~ 85 (459)
T cd07089 6 TEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAMQVDGP 85 (459)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 5889999999999999999999999999999 999999999999999999999999999999999999987765699999
Q ss_pred HHHHHHHHHHHHhhcCCcccccc-cccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 83 KTSIKSALKELKHWMTPEKAKTS-ITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
++.++++++.+.++......... ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~ 165 (459)
T cd07089 86 IGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLS 165 (459)
T ss_pred HHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence 99999999998877544322211 01124456899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCC
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~da 238 (493)
+..+.+++.++ +|+|++|+++| +.+.+..|++|+ ++.|.||||+.+|+.|++.+++++||+++|+|||||+||++||
T Consensus 166 ~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~n~~iV~~da 245 (459)
T cd07089 166 ALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSANIVLDDA 245 (459)
T ss_pred HHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeeEECCCC
Confidence 99999999998 99999999999 455789999995 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHH
Q 011107 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 239 Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
|+|.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|. +++++||++++.+++++.++++++
T Consensus 246 dl~~aa~~i~~~~~-~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~i~~a 324 (459)
T cd07089 246 DLAAAAPAAVGVCM-HNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARG 324 (459)
T ss_pred CHHHHHHHHHHHHH-HhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999985 678999999999999999999998
Q ss_pred Hh-CCeEEeCCccCC---CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 318 KV-SGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 318 ~~-~~~~~~gg~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
.. |+++++||..+. .|+|++|||+++++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.
T Consensus 325 ~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~ 404 (459)
T cd07089 325 RDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDR 404 (459)
T ss_pred HHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEEcCCHHH
Confidence 64 679999997643 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
++++++++++|+|+||++.. ..+.+||||+|.||+|+++|++++++||+.|+|.
T Consensus 405 ~~~~~~~~~~G~v~iN~~~~--~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~ 458 (459)
T cd07089 405 AYRVARRIRTGSVGINGGGG--YGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA 458 (459)
T ss_pred HHHHHHhcCcCeEEECCCCC--CCCCCCcCCcccccCCCCchHHHHHHhhceeEEe
Confidence 99999999999999998763 5677899999999999999999999999999985
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-91 Score=726.12 Aligned_cols=442 Identities=28% Similarity=0.412 Sum_probs=408.9
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..++
T Consensus 8 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 86 (456)
T cd07145 8 NGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSR-VEVERTI 86 (456)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 4999999
Q ss_pred HHHHHHHHHHHhhcCCccccccc--ccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSI--TTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
+.++++++..+.+. .+...... ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 87 ~~l~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~ 165 (456)
T cd07145 87 RLFKLAAEEAKVLR-GETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLT 165 (456)
T ss_pred HHHHHHHHHHHHhc-CccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence 99999998776432 22211110 0112345788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCC
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~da 238 (493)
+..+.+++.++ +|+|++|+++| +.+.+..|++|+ ++.|.||||+++|+.|++.++++++|+++|+|||||+||++||
T Consensus 166 ~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElgG~n~~iV~~dA 245 (456)
T cd07145 166 AIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPMIVLKDA 245 (456)
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeeEECCCC
Confidence 99999999998 99999999999 567788999995 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHH
Q 011107 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 239 Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
|++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|. +++++||++++.+++++.++++++
T Consensus 246 dl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a 324 (456)
T cd07145 246 DLERAVSIAVRGRF-ENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDA 324 (456)
T ss_pred CHHHHHHHHHHHHH-hccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999885 688999999999999999999998
Q ss_pred Hh-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHH
Q 011107 318 KV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396 (493)
Q Consensus 318 ~~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 396 (493)
.. ++++++||..+. |+|++|||+++++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++.+
T Consensus 325 ~~~ga~vl~gg~~~~-g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~ 403 (456)
T cd07145 325 VEKGGKILYGGKRDE-GSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALK 403 (456)
T ss_pred HHCCCEEEeCCCCCC-CeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence 65 679999997643 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeE
Q 011107 397 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 450 (493)
Q Consensus 397 ~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~ 450 (493)
+++++++|+|+||+.+.. ..+.+||||+|.||+|+++|++|+++|++.|+|.+
T Consensus 404 ~~~~~~~g~v~vN~~~~~-~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~~ 456 (456)
T cd07145 404 VARELEAGGVVINDSTRF-RWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIVI 456 (456)
T ss_pred HHHhCCcceEEECCCCCC-CCCCCCCCCcccccCCcCchHHHHHHhhceeEEeC
Confidence 999999999999987642 34679999999999999999999999999999853
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-90 Score=723.04 Aligned_cols=436 Identities=25% Similarity=0.384 Sum_probs=407.5
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||..|+.+|.++|.++|++++++|++++++|++++++|+|||..++. .|+..++
T Consensus 6 tg~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 84 (446)
T cd07106 6 TGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQ-FEVGGAV 84 (446)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999986 4999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++... ...... ...+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++.
T Consensus 85 ~~l~~~~~~~~---~~~~~~---~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~ 158 (446)
T cd07106 85 AWLRYTASLDL---PDEVIE---DDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTL 158 (446)
T ss_pred HHHHHHHhhhh---cCcccc---CCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 99998877642 111111 112445688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHH
Q 011107 164 LLAKLVGEYMDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV 242 (493)
Q Consensus 164 ~l~~~l~~alP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~ 242 (493)
.+++++.+++|+|++|+++|+.+.+..|++|+ +|.|+||||+++|+.|++.+++++||+++|+|||||+||++|||+|.
T Consensus 159 ~l~~~~~~~lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~iV~~dADl~~ 238 (446)
T cd07106 159 KLGELAQEVLPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPDVDIDA 238 (446)
T ss_pred HHHHHHHHhCCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCeeEECCCCCHHH
Confidence 99999999999999999999777889999996 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-C
Q 011107 243 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV-S 320 (493)
Q Consensus 243 Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~-~ 320 (493)
|++.+++++| +|+||.|+++++||||++++|+|+++|++++++++.|+|. +++++||++++.+++++.++++++.. +
T Consensus 239 aa~~iv~~~~-~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~g 317 (446)
T cd07106 239 VAPKLFWGAF-INSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKG 317 (446)
T ss_pred HHHHHHHHHH-HhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
Confidence 9999999999 9999999999999999999999999999999999988884 78999999999999999999999865 6
Q ss_pred CeEEeCCccCC-CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHh
Q 011107 321 GKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 399 (493)
Q Consensus 321 ~~~~~gg~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 399 (493)
+++++||..+. .|+|+.|||+++++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 318 a~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~ 397 (446)
T cd07106 318 AKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVAR 397 (446)
T ss_pred CEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHH
Confidence 79999997643 58899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 400 TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 400 ~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
++++|+|+||++.. ..+.+||||+|.||+|+++|++++++||+.|+|.
T Consensus 398 ~~~~G~v~iN~~~~--~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 398 RLEAGTVWINTHGA--LDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred hCCccEEEECCCCC--CCCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence 99999999998763 4678999999999999999999999999999985
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-91 Score=726.40 Aligned_cols=441 Identities=20% Similarity=0.266 Sum_probs=404.4
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+++++++++|++|+..|+++|.++|.++|++++++|++++++|++++++|+|||..++. .|+..++
T Consensus 21 t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~ 99 (474)
T cd07130 21 NGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKLVSLEMGKILPEGL-GEVQEMI 99 (474)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999986 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+.+.+ ..... ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.
T Consensus 100 ~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~ 176 (474)
T cd07130 100 DICDFAVGLSRQLYG-LTIPS--ERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAI 176 (474)
T ss_pred HHHHHHHHhHHHhcC-ccccC--CCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHHHHcCCeEEeeCCccCHHHHH
Confidence 999998876654432 21111 112334578899999999999999999999999999999999999999999999999
Q ss_pred HHHHHH----hhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCC
Q 011107 164 LLAKLV----GEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 164 ~l~~~l----~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~d 237 (493)
.+.+++ .++ +|+|++|+++|+.+.+..|++|+ +|+|.||||+++|+.|++.++++++|+++|+|||||+||++|
T Consensus 177 ~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~p~iV~~d 256 (474)
T cd07130 177 AVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFGRSLLELGGNNAIIVMED 256 (474)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHhcCCCEEEEcCCCCeEEECCC
Confidence 888775 466 89999999999777899999985 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|+|. +++++||++++.+++++++++++
T Consensus 257 adl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~ 335 (474)
T cd07130 257 ADLDLAVRAVLFAAV-GTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEE 335 (474)
T ss_pred CCHHHHHHHHHHHHH-hcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999985 67899999999999999999999
Q ss_pred HHh-CCeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 317 DKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 317 a~~-~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
+.+ ++++++||... ..|+|++|||+.++++ |++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++
T Consensus 336 a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a 414 (474)
T cd07130 336 AKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNA 414 (474)
T ss_pred HHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHH
Confidence 965 67999999753 3589999999988776 99999999999999999999999999999999999999999999999
Q ss_pred HHHHhh--cccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 395 QQFVET--VSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 395 ~~~~~~--l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++ +++|.|+||..+. ...+.+||||+|.||+|+++|++++++||+.|+|.++
T Consensus 415 ~~~~~~~~~~~g~v~iN~~~~-~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~~~ 472 (474)
T cd07130 415 FRWLGPKGSDCGIVNVNIGTS-GAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN 472 (474)
T ss_pred HHHHhhcCcceEEEEEcCCCC-CCCCCCCcCccccccCCccchHHHHHHHhheEEEEEe
Confidence 999987 8999999998543 2457799999999999999999999999999998764
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-90 Score=722.94 Aligned_cols=442 Identities=23% Similarity=0.355 Sum_probs=407.3
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhh-cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFAS-GKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
++|++++++.++.+++++++++|++||.. |+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..+
T Consensus 8 t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~ 86 (455)
T cd07148 8 DLKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAK-VEVTRA 86 (455)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHH
Confidence 57899999999999999999999999997 5679999999999999999999999999999999999999996 599999
Q ss_pred HHHHHHHHHHHHhhcCCcccccc-cccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 83 KTSIKSALKELKHWMTPEKAKTS-ITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
++.++++++.++++......... ....+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+
T Consensus 87 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~ 166 (455)
T cd07148 87 IDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLS 166 (455)
T ss_pred HHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCCcccHH
Confidence 99999999998877543211110 00112346789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCC
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daD 239 (493)
+..+++++.++ +|+|++|+++|+.+.+..|+.|+ +|.|.||||+++|+.|++.++. .+|+++|+|||||+||++|||
T Consensus 167 ~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~~~~~lElGG~~p~iV~~dAD 245 (455)
T cd07148 167 CLAFVDLLHEAGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-GTRCALEHGGAAPVIVDRSAD 245 (455)
T ss_pred HHHHHHHHHHcCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-CCcEEEecCCCCceEECCCCC
Confidence 99999999999 99999999999777889999985 9999999999999999998876 599999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHH
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (493)
+|.|++.+++++| +|+||.|++++|||||++++|+|+++|+++++++++|+|. +++++||++++.++++++++++++.
T Consensus 246 l~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~ 324 (455)
T cd07148 246 LDAMIPPLVKGGF-YHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAV 324 (455)
T ss_pred HHHHHHHHHHHHH-hcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999985 6889999999999999999999986
Q ss_pred h-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 319 V-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 319 ~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
+ ++++++||... .++|++|||+++++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.++
T Consensus 325 ~~Ga~vl~gg~~~-~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~ 403 (455)
T cd07148 325 AAGARLLCGGKRL-SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKA 403 (455)
T ss_pred hCCCEEEeCCccC-CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 5 66999999764 478999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeE
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 450 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~ 450 (493)
++++++|+|+||+++. ...+.+||||+|.||+|+++|.+++++||+.|++++
T Consensus 404 ~~~~~~g~v~iN~~~~-~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07148 404 VRRLDATAVMVNDHTA-FRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAVI 455 (455)
T ss_pred HHHcCcCeEEECCCCC-CCCCCCCCCcchhcccCCCchHHHHHHhhceeEEeC
Confidence 9999999999998753 344568999999999999999999999999999853
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-90 Score=727.00 Aligned_cols=439 Identities=25% Similarity=0.355 Sum_probs=404.6
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|+++++.|+|||..++...|+..++
T Consensus 25 tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 104 (479)
T cd07116 25 TGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAI 104 (479)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999988656999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+...... .. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 105 ~~~~~~a~~~~~~~~~~-~~---~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~ 180 (479)
T cd07116 105 DHFRYFAGCIRAQEGSI-SE---IDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASIL 180 (479)
T ss_pred HHHHHHHHhHHHcCCee-ec---CCCCceEEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 99999998776542211 11 112234578999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCC----
Q 011107 164 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG---- 237 (493)
Q Consensus 164 ~l~~~l~~alP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~d---- 237 (493)
.+++++.+++|+|++|+++| +.+.+..|+.|+ ++.|+||||+++|+.|++.+++++||+++|+|||||+||++|
T Consensus 181 ~l~~l~~~alP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~p~~lElGGk~p~iV~~da~~~ 260 (479)
T cd07116 181 VLMELIGDLLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENIIPVTLELGGKSPNIFFADVMDA 260 (479)
T ss_pred HHHHHHHHHCCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHcCCCeEEEECCCCCeEEEecCcccc
Confidence 99999999999999999999 667889999995 999999999999999999999999999999999999999998
Q ss_pred --CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHH
Q 011107 238 --INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLL 314 (493)
Q Consensus 238 --aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i 314 (493)
||+|.|++.++++ + +|+||.|++++|||||+++||+|+++|.+++++++.|+|. +.+++||++++++++++++++
T Consensus 261 ~~adl~~A~~~i~~~-~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i 338 (479)
T cd07116 261 DDAFFDKALEGFVMF-A-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYI 338 (479)
T ss_pred cccCHHHHHHHHHHH-H-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHH
Confidence 7999999999985 5 6899999999999999999999999999999999999885 678999999999999999999
Q ss_pred HHHHh-CCeEEeCCccC-----CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEec
Q 011107 315 DDDKV-SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 388 (493)
Q Consensus 315 ~~a~~-~~~~~~gg~~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t 388 (493)
+++.. ++++++||... ..|+|+.|||+.+++ +|++++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 339 ~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gLsa~v~t 417 (479)
T cd07116 339 DIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWT 417 (479)
T ss_pred HHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeCCHHHHHHHHhCCcccceEEEEc
Confidence 99865 66999999753 258899999999874 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 389 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 389 ~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|+|.++
T Consensus 418 ~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 478 (479)
T cd07116 418 RDGNTAYRMGRGIQAGRVWTNCYHL--YPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNLLVS 478 (479)
T ss_pred CCHHHHHHHHHhcCcCeEEECCCCC--CCCCCCcCCCccCcCCccChHHHHHHhhceEEEEEe
Confidence 9999999999999999999997653 456789999999999999999999999999999764
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-90 Score=720.11 Aligned_cols=437 Identities=22% Similarity=0.304 Sum_probs=406.7
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhh--cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFAS--GKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (493)
+++++++++.++.+|+++|++.|++||.. |+. +.++|.++|++++++|++++++|++++++|+|||..+++ .|+..
T Consensus 6 t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~Ev~~ 83 (455)
T cd07120 6 TGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEAR-FEISG 83 (455)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHH
Confidence 57899999999999999999999999984 998 999999999999999999999999999999999999997 59999
Q ss_pred HHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
+++.+++++...+...... .. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 84 ~i~~l~~~~~~~~~~~g~~-~~---~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~~ 159 (455)
T cd07120 84 AISELRYYAGLARTEAGRM-IE---PEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQI 159 (455)
T ss_pred HHHHHHHHHHHHHHhcCcc-cc---cCCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChHH
Confidence 9999999998887654321 11 1123456889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-h-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCC
Q 011107 162 SSLLAKLVGE-Y-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 162 ~~~l~~~l~~-a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~d 237 (493)
+..+++++.+ + +|+|++|+++| +.+.+..|++|+ ++.|.||||+++|+.|++.+++++||+++|+|||||+||++|
T Consensus 160 ~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~~~IV~~d 239 (455)
T cd07120 160 NAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCIVFDD 239 (455)
T ss_pred HHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeeEECCC
Confidence 9999999999 6 99999999998 567789999995 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
||+|.|++.+++++| .|+||.|+++++||||++++|+|+++|++++++++.|+| ++++++||++++.+++++++++++
T Consensus 240 aDl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~ 318 (455)
T cd07120 240 ADLDAALPKLERALT-IFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVER 318 (455)
T ss_pred CCHHHHHHHHHHHHH-HhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999999999999988 578999999999999999999999
Q ss_pred HHh-CCeEEeCCcc-CC---CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCH
Q 011107 317 DKV-SGKIVHGGER-DK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 391 (493)
Q Consensus 317 a~~-~~~~~~gg~~-~~---~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~ 391 (493)
+.+ ++++++||.. +. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 319 a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d~ 398 (455)
T cd07120 319 AIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDL 398 (455)
T ss_pred HHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence 865 6789987754 32 588999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 392 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 392 ~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 399 ~~a~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~ 454 (455)
T cd07120 399 ARAMRVARAIRAGTVWINDWNK--LFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIY 454 (455)
T ss_pred HHHHHHHHhcCcceEEECCCCC--CCCCCCcCCccccccCccchHHHHHHHhceeEEe
Confidence 9999999999999999998764 3567999999999999999999999999999985
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-90 Score=723.82 Aligned_cols=440 Identities=27% Similarity=0.417 Sum_probs=408.1
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++..+.+|+++++++|++|+..|+.+|..+|.++|++++++|++++++|++++++|+|||..++. .|+..++
T Consensus 19 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~~ 97 (465)
T cd07151 19 TGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIRESGSTRIKAN-IEWGAAM 97 (465)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 468999999999999999999999999999999999999999999999999999999999999999999986 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHH-
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS- 162 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~- 162 (493)
+.+++++........ ..... ...+...+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++
T Consensus 98 ~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~ 174 (465)
T cd07151 98 AITREAATFPLRMEG-RILPS--DVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGG 174 (465)
T ss_pred HHHHHHHHhHHHhcC-ccccC--CCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHhHH
Confidence 999999877665422 11111 11234567889999999999999999999999999999999999999999999996
Q ss_pred HHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCC
Q 011107 163 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (493)
Q Consensus 163 ~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daD 239 (493)
..+.+++.++ +|+|+||+++| +.+.+..|+.|+ ++.|.||||+++|+.|++.+++++||+++|+|||||+||++|||
T Consensus 175 ~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~p~iV~~daD 254 (465)
T cd07151 175 LLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVALELGGNNPFVVLEDAD 254 (465)
T ss_pred HHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCC
Confidence 6899999999 99999999998 567789999996 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHH
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (493)
+|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|+|. +++++||++++.+++++.++++++.
T Consensus 255 l~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~ 333 (465)
T cd07151 255 IDAAVNAAVFGKF-LHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAV 333 (465)
T ss_pred HHHHHHHHHHHHH-hcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999885 6789999999999999999999986
Q ss_pred h-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 319 V-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 319 ~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
. ++++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++
T Consensus 334 ~~ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~ 411 (465)
T cd07151 334 EEGATLLVGGEA--EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQF 411 (465)
T ss_pred hCCCEEEecCCc--CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHH
Confidence 5 6699999864 588999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++|+|+||+.+.+ ..+.+||||+|.||+|+++|++++++||+.|++++.
T Consensus 412 ~~~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 412 ARRIDAGMTHINDQPVN-DEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred HHhCCcCeEEECCCCCC-CCCCCCCCCcccccCCcCChHHHHHHhhceEEEEec
Confidence 99999999999987653 346799999999999999999999999999999764
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-90 Score=729.90 Aligned_cols=443 Identities=19% Similarity=0.287 Sum_probs=407.1
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHh-cHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNE-REPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~-~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
.++++++++.++.+|+++++++|++||..|+++|..+|.++|++++++|++ ++++|++++++|+|||..++...|+..+
T Consensus 56 tg~~l~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ela~~~~~e~Gk~~~~a~~~~v~~~ 135 (522)
T cd07123 56 HAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKYRYELNAATMLGQGKNVWQAEIDAACEL 135 (522)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhCHHHHHHHHHHhcCCCHHHHhHHHHHHH
Confidence 479999999999999999999999999999999999999999999999996 8999999999999999998866688899
Q ss_pred HHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecc-eEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPF-GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
++.+++++....++........ ..+...++.++|+ |||++|+|||||+....+++++|| +||+||+|||+.+|++
T Consensus 136 ~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~~~~~pal-aGN~VVlKPs~~tp~~ 211 (522)
T cd07123 136 IDFLRFNVKYAEELYAQQPLSS---PAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAVLS 211 (522)
T ss_pred HHHHHHHHHHHHHhcCccccCC---CCCceeEEEEecCCceEEEECCcccHHHHHHHHHHHHH-hCCEEEEECCCCCCHH
Confidence 9999999988877654322111 1134567899998 999999999999999999999999 6999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhcccc------chhhhcCCCCeE
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLT------PVLLELGGKSPV 232 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~------~~~~elgG~~p~ 232 (493)
+..+.+++.++ +|+|+||+++|+ .+.+..|+.|+ ++.|+||||+++|+.|++.++++++ |+++|+|||||+
T Consensus 212 ~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGkn~~ 291 (522)
T cd07123 212 NYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFH 291 (522)
T ss_pred HHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhhcccccccCCEEEECCCCCee
Confidence 99999999999 999999999994 56789999985 9999999999999999999998877 899999999999
Q ss_pred EEcCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHH
Q 011107 233 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLS 311 (493)
Q Consensus 233 iV~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~ 311 (493)
||++|||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|. +++++||+++++++++++
T Consensus 292 IV~~dAdl~~Aa~~i~~~~f-~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~ 370 (522)
T cd07123 292 LVHPSADVDSLVTATVRGAF-EYQGQKCSAASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIK 370 (522)
T ss_pred EECCCCCHHHHHHHHHHHHH-hcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCccCCCCCCCCCCCCCCCHHHHHHHH
Confidence 99999999999999999999 9999999999999999999999999999999999999985 678999999999999999
Q ss_pred HHHHHHHh--CCeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCC--HHHHHHHHhcCC-CCcEEE
Q 011107 312 KLLDDDKV--SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDIINSGT-KPLAAY 385 (493)
Q Consensus 312 ~~i~~a~~--~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~n~~~-~gl~a~ 385 (493)
++++++.+ ++++++||..+ ..|+|++|||+++++++|++++||+||||++|++|+| ++|+|+++|++. |||++|
T Consensus 371 ~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~~~~eai~~aN~~~~~gL~a~ 450 (522)
T cd07123 371 GYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGA 450 (522)
T ss_pred HHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEEEeCCCCHHHHHHHHhCCCCcCceEE
Confidence 99999865 56999999754 3589999999999999999999999999999999995 799999999985 999999
Q ss_pred EecCCHHHHHHHHhhc--ccceEEEcCCCcccCCCCCCccCCCCCCCC-CcchHHHHHHhhhccEEeEe
Q 011107 386 LFTNNKKLKQQFVETV--SAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 386 v~t~d~~~~~~~~~~l--~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G-~~~g~~~~~~~t~~k~v~~~ 451 (493)
|||+|.+.+.++++++ ++|.|+||+.+.+...+.+||||+|.||+| +++|.+++++|++.|++...
T Consensus 451 Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~g~~~l~~~~~~k~~~~~ 519 (522)
T cd07123 451 IFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGSPLNLLRWVSPRTIKET 519 (522)
T ss_pred EEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcccCCHHHHHHhcceEEEEEe
Confidence 9999999999999996 599999998776555568999999999995 99999999999999998764
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-90 Score=728.57 Aligned_cols=445 Identities=22% Similarity=0.360 Sum_probs=412.8
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+|+++++++|++|++.|+.+|.++|.++|++++++|+++.++|++++++|+|||..++. .|+..++
T Consensus 41 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 119 (524)
T PRK09407 41 TGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREELLDLVQLETGKARRHAF-EEVLDVA 119 (524)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999986 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++..+++++.++....... .....+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 120 ~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~ALaaGN~VIlKPs~~tp~~~~ 198 (524)
T PRK09407 120 LTARYYARRAPKLLAPRRRAGALP-VLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTAL 198 (524)
T ss_pred HHHHHHHHHHHHhhCCccccccCC-CCceEEEEEecceEEEEEeCCCChHHHHHHHHHHHHHcCCEEEEECCCCCHHHHH
Confidence 999999999888766443221111 1245678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCCCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+.+++.++ +|+|++|+++| +.+.+..|++| ++.|+||||+++|+.|++.++++++|+++|+|||||+||++|||++
T Consensus 199 ~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~-~d~V~fTGs~~~g~~v~~~aa~~~~~v~lElGGknp~iV~~dADl~ 277 (524)
T PRK09407 199 AAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN-ADYLMFTGSTATGRVLAEQAGRRLIGFSLELGGKNPMIVLDDADLD 277 (524)
T ss_pred HHHHHHHHcCCCcccEEEEecCCchHHHHHHhc-CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceeEECCCCCHH
Confidence 999999999 99999999999 56778889876 7999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| .|+||.|+++++||||+++||+|+++|++++++++.|+| ++++++||++++.+++++.++++++.+
T Consensus 278 ~Aa~~i~~~~f-~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~ 356 (524)
T PRK09407 278 KAAAGAVRACF-SNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAK 356 (524)
T ss_pred HHHHHHHHHHH-hcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcCCccCCCCCHHHHHHHHHHHHHHHhC
Confidence 99999999999 999999999999999999999999999999999998888 478899999999999999999999865
Q ss_pred CCeEEeCCccC--CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 320 SGKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 320 ~~~~~~gg~~~--~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
++++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++
T Consensus 357 Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~~~N~~~~gLsa~V~t~d~~~a~~~ 436 (524)
T PRK09407 357 GATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAI 436 (524)
T ss_pred CCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 67999998743 2578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcc-cCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 398 VETVSAGGLVINDTAVH-LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~-~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++|.|+||+...+ ...+.+||||+|.||+|+++|.+++++||+.|+|++++
T Consensus 437 ~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~ 492 (524)
T PRK09407 437 AARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIATQR 492 (524)
T ss_pred HHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEEEEcc
Confidence 99999999999986542 23467899999999999999999999999999998775
|
|
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-90 Score=726.05 Aligned_cols=440 Identities=25% Similarity=0.360 Sum_probs=409.1
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh---hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA---SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA 80 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~ 80 (493)
.++++++++..+.+++++++++|++||. .|+.+|.++|.++|++++++|+++.++|++++++|+|||..++...|+.
T Consensus 31 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~ 110 (481)
T cd07141 31 TGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLP 110 (481)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCchHHHHHHHHH
Confidence 4789999999999999999999999998 6999999999999999999999999999999999999999777556999
Q ss_pred HHHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchH
Q 011107 81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (493)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~ 160 (493)
.+++.+++++...+.+.+.. ... ..+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.
T Consensus 111 ~~~~~l~~~a~~~~~~~g~~-~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~ 186 (481)
T cd07141 111 GAIKVLRYYAGWADKIHGKT-IPM---DGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPL 186 (481)
T ss_pred HHHHHHHHHHHHHHHhcCce-ecC---CCCceEEEEEeceeEEEEEccChhHHHHHHHHHHHHHHcCCEEEEeCCCCCcH
Confidence 99999999998877764421 111 11234578999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhc-cccchhhhcCCCCeEEEcC
Q 011107 161 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDS 236 (493)
Q Consensus 161 ~~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~-~~~~~~~elgG~~p~iV~~ 236 (493)
++..+++++.++ +|+|++|+|+| +.+.+..|+.|+ +|.|+||||+.+|+.|++.++. ++||+++|+|||||+||++
T Consensus 187 ~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~lElGG~~~~iV~~ 266 (481)
T cd07141 187 TALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLELGGKSPNIVFA 266 (481)
T ss_pred HHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhhhcCceEEEEcCCCCeEEECC
Confidence 999999999999 99999999999 556788999995 9999999999999999998886 8999999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 011107 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (493)
Q Consensus 237 daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~ 315 (493)
|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|. +++++||++++.+++++.++++
T Consensus 267 dADl~~A~~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~ 345 (481)
T cd07141 267 DADLDYAVEQAHEALF-FNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIE 345 (481)
T ss_pred CCCHHHHHHHHHHHHH-hcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCcCCCCHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999999999999999985 6799999999999999999999
Q ss_pred HHHh-CCeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 316 DDKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 316 ~a~~-~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
++.. ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++
T Consensus 346 ~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~ 425 (481)
T cd07141 346 SGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDK 425 (481)
T ss_pred HHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHH
Confidence 9865 66999999763 368999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeE
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 450 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~ 450 (493)
+.++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|+|++
T Consensus 426 a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~ 480 (481)
T cd07141 426 AITFSNALRAGTVWVNCYNV--VSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVTI 480 (481)
T ss_pred HHHHHHhcCcCeEEECCCCC--CCCCCCCCCcccCcCCccchHHHHHHHhheEEEEE
Confidence 99999999999999998653 56789999999999999999999999999999875
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-90 Score=722.05 Aligned_cols=439 Identities=28% Similarity=0.389 Sum_probs=410.1
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcC-CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGK-TKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
+++++++++.++.+|+++++++|++|++.|. .+|.++|.++|++++++|++++++|+++++.|+|||..+++ .|+..+
T Consensus 6 tg~~i~~~~~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~ 84 (454)
T cd07109 6 TGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQAR-ADVEAA 84 (454)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHH
Confidence 5789999999999999999999999999876 99999999999999999999999999999999999999997 599999
Q ss_pred HHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHH
Q 011107 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~ 162 (493)
++.++++++..+.+.+.. .. ...+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 85 ~~~l~~~~~~~~~~~g~~-~~---~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~ 160 (454)
T cd07109 85 ARYFEYYGGAADKLHGET-IP---LGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTA 160 (454)
T ss_pred HHHHHHHHHHHHHhcCcc-cc---cCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHH
Confidence 999999988877654321 11 11234578899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCC
Q 011107 163 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (493)
Q Consensus 163 ~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daD 239 (493)
..+++++.++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+++|+.|++.+++++||+++|+|||||+||++|||
T Consensus 161 ~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~~~iV~~daD 240 (454)
T cd07109 161 LRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIVFADAD 240 (454)
T ss_pred HHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCCceEECCCCC
Confidence 9999999998 99999999999 678889999996 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
++.|++.+++++| +|+||.|+++++||||++++|+|+++|++++++++.|+|.+++++||++++++++++.++++++..
T Consensus 241 l~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~~~~~gpli~~~~~~~~~~~i~~a~~ 319 (454)
T cd07109 241 LEAALPVVVNAII-QNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLEDPDLGPLISAKQLDRVEGFVARARA 319 (454)
T ss_pred HHHHHHHHHHHHH-hccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcccCcCCCccCHHHHHHHHHHHHHHHh
Confidence 9999999999999 999999999999999999999999999999999999999778899999999999999999999865
Q ss_pred -CCeEEeCCccC----CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 320 -SGKIVHGGERD----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 320 -~~~~~~gg~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+
T Consensus 320 ~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~~~ 399 (454)
T cd07109 320 RGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRA 399 (454)
T ss_pred CCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCCHHHH
Confidence 67999998753 2588999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
.++++++++|+|+||++..+ ..+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 400 ~~~~~~l~~g~v~iN~~~~~-~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 453 (454)
T cd07109 400 LRVARRLRAGQVFVNNYGAG-GGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453 (454)
T ss_pred HHHHHhcCcCeEEECCCCCC-CCCCCCcCCcccCcCCccchHHHHHHHhceeEEe
Confidence 99999999999999987633 3567899999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-90 Score=728.15 Aligned_cols=444 Identities=21% Similarity=0.293 Sum_probs=408.9
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHH-hcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN-EREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~-~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
.++++++++..+.+|+++++++|++||+.|+.+|..+|.++|++++++|+ +++++|+++++.|+|||..+++..++..+
T Consensus 56 ~g~~i~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l~~~~~~~la~~~~~e~GK~~~~a~~e~v~~~ 135 (533)
T TIGR01236 56 HQAVLAKATNATEEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLLSGPYREEILAATMLGQSKNVYQAEIDAVAEL 135 (533)
T ss_pred CCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHcCCcHHHHhHhHHHHH
Confidence 36899999999999999999999999999999999999999999999999 59999999999999999999875449999
Q ss_pred HHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecc-eEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPF-GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
++.+++++...+.+....... ...+...++.++|+ |||++|+|||||+....+++++|| +||+||+|||+.+|.+
T Consensus 136 i~~~~~~a~~a~~~~~~~~~~---~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~AL-aGN~VVlKPs~~tp~~ 211 (533)
T TIGR01236 136 IDFFRFNVKYARELYEQQPSE---SAPGEWNRTDYRPLEGFVYAISPFNFTAIAGNLPGAPAL-MGNTVIWKPSITATLS 211 (533)
T ss_pred HHHHHHHHHHHHHhcCccccC---CCCCceeEEEEecCCCEEEEEeCCchHHHHHHHHHHHHH-hCCeEEEECCCcCCHH
Confidence 999999998877664432101 11234568899999 999999999999999999999999 8999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccc------hhhhcCCCCeE
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTP------VLLELGGKSPV 232 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~------~~~elgG~~p~ 232 (493)
+..+.+++.++ +|+|+||+++| +.+.+..|+.|+ ++.|+||||+++|+.|++.++++++| +++|+|||||+
T Consensus 212 ~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGknp~ 291 (533)
T TIGR01236 212 NYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLWKWVASNLDRYHNFPRIVGETGGKDFH 291 (533)
T ss_pred HHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhhccccccCCcEEEEcCCCCeE
Confidence 99999999999 99999999999 567889999995 99999999999999999999998874 99999999999
Q ss_pred EEcCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHH
Q 011107 233 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLS 311 (493)
Q Consensus 233 iV~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~ 311 (493)
||++|||+|.|++.+++|+| .|+||.|++++|||||+++||+|+++|+++++++++|+|. +++++||++++.+++++.
T Consensus 292 IV~~dADl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~ 370 (533)
T TIGR01236 292 VVHPSADIDHAVTATIRGAF-EYQGQKCSAASRLYVPHSVWPRFKDELLAELAEVKVGDPDDFSNFMGAVIDERSFVKNV 370 (533)
T ss_pred EECCCCCHHHHHHHHHHHHH-hhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhcCCcCCCCCCCCcccccCCHHHHHHHH
Confidence 99999999999999999999 9999999999999999999999999999999999999995 688999999999999999
Q ss_pred HHHHHHHhC---CeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCC--HHHHHHHH-hcCCCCcEE
Q 011107 312 KLLDDDKVS---GKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDII-NSGTKPLAA 384 (493)
Q Consensus 312 ~~i~~a~~~---~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~a 384 (493)
++++++.+. +++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+| ++||++++ |+++|||++
T Consensus 371 ~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a 450 (533)
T TIGR01236 371 KYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLTG 450 (533)
T ss_pred HHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCceE
Confidence 999998763 4999999764 3589999999999999999999999999999999998 49999999 889999999
Q ss_pred EEecCCHHHHHHHHhhcc--cceEEEcCCCcccCCCCCCccCCCCCCCC-CcchHHHHHHhhhccEEeEec
Q 011107 385 YLFTNNKKLKQQFVETVS--AGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 385 ~v~t~d~~~~~~~~~~l~--~g~v~iN~~~~~~~~~~~p~gG~~~SG~G-~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+|||+|.+.+.+++++++ +|.|+||+.+.+...+.+||||+|.||+| +++|.+++++|++.|++....
T Consensus 451 ~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~~ 521 (533)
T TIGR01236 451 AVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTNDKAGGPLNLLRWTSARSIKETF 521 (533)
T ss_pred EEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhcceEEEEEEc
Confidence 999999999999999977 99999998776555578999999999998 999999999999999998765
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-90 Score=728.71 Aligned_cols=443 Identities=24% Similarity=0.357 Sum_probs=412.3
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+++++++++|++|+..|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 60 t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 138 (514)
T PRK03137 60 KSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRRKHEFSAWLVKEAGKPWAEAD-ADTAEAI 138 (514)
T ss_pred CCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++..+.++...+.... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.
T Consensus 139 ~~~~~~a~~~~~~~~~~~~~~---~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~ 215 (514)
T PRK03137 139 DFLEYYARQMLKLADGKPVES---RPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAA 215 (514)
T ss_pred HHHHHHHHHHHHhcCCccccC---CCCceEEEEEecCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 999999998887653332211 12345688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhc------cccchhhhcCCCCeEEE
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK------HLTPVLLELGGKSPVVF 234 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~------~~~~~~~elgG~~p~iV 234 (493)
.+.+++.++ +|+|++|+++| +.+.+..|++|+ ++.|+||||+.+|+.|++.+++ ++||+++|+|||||+||
T Consensus 216 ~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~l~~v~lElgGk~~~iV 295 (514)
T PRK03137 216 KFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVV 295 (514)
T ss_pred HHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHHHhcccccccccceEEecCCCCCeEEE
Confidence 999999999 99999999998 567789999995 9999999999999999999886 68999999999999999
Q ss_pred cCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHH
Q 011107 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLL 314 (493)
Q Consensus 235 ~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i 314 (493)
++|||+|.|++.+++++| .|+||.|+++++||||+++||+|+++|++++++++.|+|.+..++||++++.+++++.+++
T Consensus 296 ~~daDl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~Gpli~~~~~~~v~~~v 374 (514)
T PRK03137 296 DEDADLDLAAESIVASAF-GFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVGNPEDNAYMGPVINQASFDKIMSYI 374 (514)
T ss_pred CCCCCHHHHHHHHHHHHH-hCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCccCcCCCCCHHHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999999999999999996434999999999999999999
Q ss_pred HHHHhCCeEEeCCccCC-CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 315 DDDKVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 315 ~~a~~~~~~~~gg~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
+++.+++++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.
T Consensus 375 ~~a~~~~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~ 454 (514)
T PRK03137 375 EIGKEEGRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREH 454 (514)
T ss_pred HHHHhCCEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHH
Confidence 99977789999997643 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCC-CcchHHHHHHhhhccEEeEe
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G-~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++++++|+|+||+.+.+...+.+||||+|.||+| +++|.+++++||+.|+|...
T Consensus 455 a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft~~k~v~~~ 513 (514)
T PRK03137 455 LEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQAKTVSEM 513 (514)
T ss_pred HHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhceEEEEEEe
Confidence 99999999999999998766555567999999999999 68999999999999998653
|
|
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-90 Score=716.22 Aligned_cols=423 Identities=25% Similarity=0.411 Sum_probs=397.2
Q ss_pred HHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhcC
Q 011107 19 ASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMT 98 (493)
Q Consensus 19 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 98 (493)
+++++++|++||..|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.+++++...+++..
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~ 79 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEAR-AEVEKCAWICRYYAENAEAFLA 79 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC
Confidence 478999999999999999999999999999999999999999999999999999997 5999999999999999888765
Q ss_pred CcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhh-cCCCc
Q 011107 99 PEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 177 (493)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~a-lP~g~ 177 (493)
.+.... .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+
T Consensus 80 ~~~~~~----~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gv 155 (429)
T cd07100 80 DEPIET----DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGV 155 (429)
T ss_pred CeeccC----CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCc
Confidence 443321 1345678999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred EEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHHHHhhcccCC
Q 011107 178 IRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNN 256 (493)
Q Consensus 178 v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~~~~~~~~ 256 (493)
+|+++|+.+.+..|++|+ ++.|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| +|+
T Consensus 156 v~~v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~-~~~ 234 (429)
T cd07100 156 FQNLLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRL-QNA 234 (429)
T ss_pred EEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHH-hcc
Confidence 999999667788999984 999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-CCeEEeCCccCC-CC
Q 011107 257 GQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDK-NK 333 (493)
Q Consensus 257 Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~~~~gg~~~~-~g 333 (493)
||.|+++++||||+++||+|+++|++++++++.|+|. +++++||++++.+++++.++++++.+ ++++++||...+ .|
T Consensus 235 GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g 314 (429)
T cd07100 235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPG 314 (429)
T ss_pred CCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCC
Confidence 9999999999999999999999999999999999984 68899999999999999999999865 669999997543 57
Q ss_pred ceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcccceEEEcCCCc
Q 011107 334 LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAV 413 (493)
Q Consensus 334 ~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~ 413 (493)
+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+.++++++++++|.|+||++..
T Consensus 315 ~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~ 394 (429)
T cd07100 315 AFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVK 394 (429)
T ss_pred eEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998764
Q ss_pred ccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 414 HLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 414 ~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
..+.+||||+|.||+|+++|++++++||+.|+|.
T Consensus 395 --~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 395 --SDPRLPFGGVKRSGYGRELGRFGIREFVNIKTVW 428 (429)
T ss_pred --CCCCCCcCCccccccCCcchHHHHHHhcceeEEe
Confidence 4577999999999999999999999999999985
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-90 Score=721.51 Aligned_cols=440 Identities=27% Similarity=0.389 Sum_probs=410.8
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+++++++++|++|+..|+.+|.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..++
T Consensus 6 t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~ 84 (457)
T cd07090 6 TGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEAR-VDIDSSA 84 (457)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999886 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+.... +.... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.
T Consensus 85 ~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~~ 160 (457)
T cd07090 85 DCLEYYAGLAPTLSG-EHVPL---PGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTAL 160 (457)
T ss_pred HHHHHHHHHHHHhCC-eeecc---CCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHHH
Confidence 999999987766422 22111 12445678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+.+++.++ +|+|++|+++|+.+.+..|+.|+ +++|+||||+++|+.|++.+++++||+++|+|||||+||++|||+|
T Consensus 161 ~l~~~~~~aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dAdl~ 240 (457)
T cd07090 161 LLAEILTEAGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFDDADLE 240 (457)
T ss_pred HHHHHHHHcCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCceEECCCCCHH
Confidence 999999999 99999999999777889999996 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| .|+||.|+++++||||++++|+|+++|++++++++.|+| ++++++||++++++++++.++|+++..
T Consensus 241 ~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 319 (457)
T cd07090 241 NAVNGAMMANF-LSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQE 319 (457)
T ss_pred HHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHHC
Confidence 99999999999 999999999999999999999999999999999999988 478899999999999999999999865
Q ss_pred CCeEEeCCccC------CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 320 SGKIVHGGERD------KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 320 ~~~~~~gg~~~------~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
++++++||... .+|+|++|||+++++++|+++++|+||||++|++|+|.||||+++|+++|||+++|||+|.+.
T Consensus 320 Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~ 399 (457)
T cd07090 320 GAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQR 399 (457)
T ss_pred CCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHHH
Confidence 67999999752 258899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|+|.+.
T Consensus 400 ~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~~ 455 (457)
T cd07090 400 AHRVIAQLQAGTCWINTYNI--SPVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVE 455 (457)
T ss_pred HHHHHHhCCcCeEEECCCCC--CCCCCCcCCCccCcCCccchHHHHHHHhCeEEEEEe
Confidence 99999999999999998643 457799999999999999999999999999999764
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-90 Score=721.37 Aligned_cols=441 Identities=27% Similarity=0.381 Sum_probs=407.6
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh-hcC-CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA-SGK-TKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~-~w~-~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (493)
.++++++++.++.+|+++++++|++||. .|+ .+|.++|.++|++++++|++++++|++++++|+|||..++...|+..
T Consensus 31 t~~~i~~~~~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~ 110 (481)
T cd07143 31 TGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQA 110 (481)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 4789999999999999999999999998 599 99999999999999999999999999999999999997665569999
Q ss_pred HHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
+++.+++++...+..... .... ..+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+
T Consensus 111 ~~~~~~~~a~~a~~~~g~-~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~ 186 (481)
T cd07143 111 SADTFRYYGGWADKIHGQ-VIET---DIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLS 186 (481)
T ss_pred HHHHHHHHHHHHHHhcCc-cccC---CCCceEEEEEecceeEEEECCCcChHHHHHHHHHHHHHcCCEEEEeCCCCCcHH
Confidence 999999998877654322 1111 123356789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhc-cccchhhhcCCCCeEEEcCC
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~-~~~~~~~elgG~~p~iV~~d 237 (493)
+..+.+++.++ +|+|++|+++| +.+.+..|+.|+ +|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|
T Consensus 187 ~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~~~~~~~~lElGG~~p~iV~~d 266 (481)
T cd07143 187 ALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTLELGGKSPNIVFDD 266 (481)
T ss_pred HHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHHhcCCEEEeecCCCCeeEECCC
Confidence 99999999999 99999999999 456789999995 9999999999999999998885 78999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
||++.|++.+++++| +|+||.|+++++||||++++|+|+++|.++++++++|+|. +++++||++++.+++++.+++++
T Consensus 267 ADl~~Aa~~i~~~~~-~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~ 345 (481)
T cd07143 267 ADLESAVVWTAYGIF-FNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIES 345 (481)
T ss_pred CCHHHHHHHHHHHHH-hccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999884 78899999999999999999999
Q ss_pred HHh-CCeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 317 DKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 317 a~~-~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
+.. ++++++||..+ ..|+|+.|||+.+++++|++++||+||||++|++|+|++||++++|+++|||++||||+|.+.+
T Consensus 346 a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~ 425 (481)
T cd07143 346 GKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNA 425 (481)
T ss_pred HHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 865 67999999764 3688999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
.++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|+|.++
T Consensus 426 ~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i~~~ 480 (481)
T cd07143 426 IRVANALKAGTVWVNCYNL--LHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHIN 480 (481)
T ss_pred HHHHHhcCcCeEEECCCCC--CCCCCCCCCccccccCcccHHHHHHHHhCeEEEEEe
Confidence 9999999999999998654 467799999999999999999999999999998753
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-90 Score=718.32 Aligned_cols=436 Identities=25% Similarity=0.370 Sum_probs=405.6
Q ss_pred hhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHH
Q 011107 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT 84 (493)
Q Consensus 5 ~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~ 84 (493)
++++++++.++.+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~i~ 79 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAG-FEVGAAIG 79 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999886 59999999
Q ss_pred HHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHH-H
Q 011107 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS-S 163 (493)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~-~ 163 (493)
.+++++........ ...+. ..+...+.+++|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++ .
T Consensus 80 ~l~~~~~~~~~~~~-~~~~~---~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~ 155 (443)
T cd07152 80 ELHEAAGLPTQPQG-EILPS---APGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGV 155 (443)
T ss_pred HHHHHHHhHHHhCC-ccccc---cCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHH
Confidence 99999876654322 11111 1234567899999999999999999999999999999999999999999999996 7
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+.+++.++ +|+|++|+++|+.+.+..|++|+ ++.|+||||+.+|+.|.+.+++++||+++|+|||||+||++|||+|
T Consensus 156 ~l~~~~~~ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~ 235 (443)
T cd07152 156 VIARLFEEAGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLD 235 (443)
T ss_pred HHHHHHHHhCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHH
Confidence 899999998 99999999999778889999985 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| +|+||.|+++++||||+++||+|+++|.+++++++.|+|. +++++||++++.+++++.++++++..
T Consensus 236 ~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 314 (443)
T cd07152 236 LAASNGAWGAF-LHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAA 314 (443)
T ss_pred HHHHHHHHHHH-hhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhC
Confidence 99999999999 9999999999999999999999999999999999999884 67899999999999999999999865
Q ss_pred CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHh
Q 011107 320 SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 399 (493)
Q Consensus 320 ~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 399 (493)
++++++||.. +|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++
T Consensus 315 Ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~ 392 (443)
T cd07152 315 GARLEAGGTY--DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALAD 392 (443)
T ss_pred CCEEEeccCc--CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHH
Confidence 6799999875 48999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccceEEEcCCCcccCCCCCCccCCCCCCCC-CcchHHHHHHhhhccEEe
Q 011107 400 TVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 400 ~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G-~~~g~~~~~~~t~~k~v~ 449 (493)
++++|+|+||+++.+ ..+.+||||+|.||+| +++|++++++||+.|++.
T Consensus 393 ~l~~G~v~iN~~~~~-~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~ 442 (443)
T cd07152 393 RLRTGMLHINDQTVN-DEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVT 442 (443)
T ss_pred hCCcCeEEECCCCCC-CCCCCCCCCcccccCCCccCcHHHHHHhhceeEEe
Confidence 999999999987764 3577999999999999 888999999999999875
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-90 Score=722.80 Aligned_cols=441 Identities=25% Similarity=0.388 Sum_probs=410.9
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (493)
.++++++++.++.+|+++++++|++||. .|+.+|.++|.++|++++++|++++++|++++++|+|||..++...|+..
T Consensus 44 tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~ 123 (494)
T PRK09847 44 TQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPG 123 (494)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4789999999999999999999999997 59999999999999999999999999999999999999998876569999
Q ss_pred HHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
+++.++++++.++.+.+.. .+. ..+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+
T Consensus 124 ~~~~l~~~a~~~~~~~g~~-~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~ 199 (494)
T PRK09847 124 AARAIRWYAEAIDKVYGEV-ATT---SSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLS 199 (494)
T ss_pred HHHHHHHHHHHHHHhcCcc-ccC---CCCceeEEEecceeEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCChHH
Confidence 9999999999888765432 111 123345789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHh-ccccchhhhcCCCCeEEEcCC
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~-~~~~~~~~elgG~~p~iV~~d 237 (493)
+..+++++.++ +|+|+||+++| +.+.+..|+.|+ +|.|+||||+.+|+.|.+.++ .+++|+++|+|||||+||++|
T Consensus 200 ~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~aa~~~~~~~~lElGGk~~~iV~~d 279 (494)
T PRK09847 200 AIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFAD 279 (494)
T ss_pred HHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhhCCCeEEEecCCCCeeEEcCC
Confidence 99999999999 99999999999 667889999985 999999999999999999888 588999999999999999999
Q ss_pred C-CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 011107 238 I-NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (493)
Q Consensus 238 a-Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~ 315 (493)
+ |+|.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|. +++++||++++.+++++.++|+
T Consensus 280 aaDl~~Aa~~i~~~~~-~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~ 358 (494)
T PRK09847 280 CPDLQQAASATAAGIF-YNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIR 358 (494)
T ss_pred ccCHHHHHHHHHHHHH-hcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCcCHHHHHHHHHHHH
Confidence 7 99999999999999 9999999999999999999999999999999999999885 6889999999999999999999
Q ss_pred HHHhCCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 011107 316 DDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (493)
Q Consensus 316 ~a~~~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 395 (493)
++...|++++||.....++|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++.
T Consensus 359 ~a~~~G~i~~gg~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~a~ 438 (494)
T PRK09847 359 EGESKGQLLLDGRNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAH 438 (494)
T ss_pred HHHHCCeEEECCccCCCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 99776699999876556789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 396 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 396 ~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|+|.+.
T Consensus 439 ~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~ 492 (494)
T PRK09847 439 RMSRRLKAGSVFVNNYND--GDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWIS 492 (494)
T ss_pred HHHHhCCcceEEECCCCC--CCCCCCcCCCcccccCccchHHHHHHhhceEEEEEe
Confidence 999999999999998654 456789999999999999999999999999999764
|
|
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-90 Score=717.94 Aligned_cols=439 Identities=25% Similarity=0.405 Sum_probs=408.2
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhh--cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFAS--GKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (493)
.++++++++.++.+|+++++++|++||+. |+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..
T Consensus 6 t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~ 84 (454)
T cd07118 6 HGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQAR-GEIEG 84 (454)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHH
Confidence 57899999999999999999999999985 9999999999999999999999999999999999999999996 69999
Q ss_pred HHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
+++.+++++...+.... ..... ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+
T Consensus 85 ~i~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~ 161 (454)
T cd07118 85 AADLWRYAASLARTLHG-DSYNN--LGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGT 161 (454)
T ss_pred HHHHHHHHHHHHHHhcC-ccccc--CCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHH
Confidence 99999998886655432 11111 1123345789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCC
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~da 238 (493)
+..+.+++.++ +|+|++|+++|+ .+.+..|++|+ ++.|.||||+++|+.|.+.++++++|+++|+|||||+||++||
T Consensus 162 ~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n~~iV~~dA 241 (454)
T cd07118 162 TLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFADA 241 (454)
T ss_pred HHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCCceEECCCC
Confidence 99999999999 999999999984 46789999995 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHH
Q 011107 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 239 Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
|+|.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|. +++++||++++.+++++.++|+++
T Consensus 242 dl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a 320 (454)
T cd07118 242 DLDAAADAVVFGVY-FNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAG 320 (454)
T ss_pred CHHHHHHHHHHHHH-hccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999984 678999999999999999999998
Q ss_pred Hh-CCeEEeCCccCC--CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 318 KV-SGKIVHGGERDK--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 318 ~~-~~~~~~gg~~~~--~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
.. ++++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|++||++++|+++|||+++|||+|.+.+
T Consensus 321 ~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~ 400 (454)
T cd07118 321 RAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTA 400 (454)
T ss_pred HhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHHHH
Confidence 65 669999997643 689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
.++++++++|.|+||++.. ..+.+||||+|.||+|+++|++++++||+.|++.
T Consensus 401 ~~~~~~l~~g~v~iN~~~~--~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 401 LTVARRIRAGTVWVNTFLD--GSPELPFGGFKQSGIGRELGRYGVEEYTELKTVH 453 (454)
T ss_pred HHHHHhcCcCEEEECCCCC--CCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 9999999999999998764 4678999999999999999999999999999875
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-90 Score=723.83 Aligned_cols=443 Identities=22% Similarity=0.334 Sum_probs=412.9
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++|++.|+.+|.++|.++|++++++|++++++|+++++.|+|||..++. .|+..++
T Consensus 42 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 120 (500)
T cd07083 42 PSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNWVEAI-DDVAEAI 120 (500)
T ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 489999999999999999999999999999999999999999999999999999999999999999999975 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++.+..+........ ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~ 198 (500)
T cd07083 121 DFIRYYARAALRLRYPAVEVV--PYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGY 198 (500)
T ss_pred HHHHHHHHHHHHhcCcccccC--CCCCceEEEEEeccceEEEEcCCccHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHH
Confidence 999999999887754332111 112345678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccc------cchhhhcCCCCeEEE
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL------TPVLLELGGKSPVVF 234 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~------~~~~~elgG~~p~iV 234 (493)
.+++++.++ +|+|+||+++| +.+.+..|++|+ +|.|+||||+.+|+.|.+.+++++ +|+++|+|||||+||
T Consensus 199 ~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~aa~~~~~~~~~~~v~lElgG~~~~iV 278 (500)
T cd07083 199 KVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIV 278 (500)
T ss_pred HHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhhccccccccCcEEEecCCCCeEEE
Confidence 999999999 99999999999 567889999985 999999999999999999998876 999999999999999
Q ss_pred cCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHH
Q 011107 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKL 313 (493)
Q Consensus 235 ~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~ 313 (493)
++|||+|.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|. +++++||++++.++++++++
T Consensus 279 ~~dadl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~ 357 (500)
T cd07083 279 DETADFELVVEGVVVSAF-GFQGQKCSAASRLILTQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSY 357 (500)
T ss_pred CCCCCHHHHHHHHHHHHH-hhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999999999999999985 67899999999999999999
Q ss_pred HHHHHhCCeEEeCCccCC-CCceeeceEecCCCCCCcccccccccceeeeEeeC--CHHHHHHHHhcCCCCcEEEEecCC
Q 011107 314 LDDDKVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTNN 390 (493)
Q Consensus 314 i~~a~~~~~~~~gg~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d 390 (493)
++++..++++++||..+. .|+|+.|||+.+++++|++++||+||||++|++|+ |++|||+++|+++|||+++|||+|
T Consensus 358 i~~a~~~g~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~d~~~~eai~~~n~~~~gL~~~v~t~d 437 (500)
T cd07083 358 IEHGKNEGQLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRK 437 (500)
T ss_pred HHHHHhCCEEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCC
Confidence 999987789999997643 58899999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCC-CcchHHHHHHhhhccEEeE
Q 011107 391 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLS 450 (493)
Q Consensus 391 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G-~~~g~~~~~~~t~~k~v~~ 450 (493)
.+.+.++++++++|+|+||+++.+...+.+||||+|.||+| +++|.+++++||+.|++..
T Consensus 438 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~~~~ 498 (500)
T cd07083 438 REHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRFLEMKAVAE 498 (500)
T ss_pred HHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHHHHhhheeEEEE
Confidence 99999999999999999999876655567899999999999 6889999999999999864
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-90 Score=722.75 Aligned_cols=441 Identities=24% Similarity=0.363 Sum_probs=410.3
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (493)
.++++++++..+.++++++++.|++||. .|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..
T Consensus 22 tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~ 100 (482)
T cd07119 22 NGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELARLETLNTGKTLRESE-IDIDD 100 (482)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHH
Confidence 4789999999999999999999999997 59999999999999999999999999999999999999999997 49999
Q ss_pred HHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
+++.+++++...++... +.... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 101 ~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~ 176 (482)
T cd07119 101 VANCFRYYAGLATKETG-EVYDV---PPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLT 176 (482)
T ss_pred HHHHHHHHHHHHHHhcC-ccccC---CCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCccccHH
Confidence 99999999988876432 21111 123456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCC
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~da 238 (493)
+.++.+++.++ +|+|++|+++|+ .+.+..|++|+ +|+|.||||+++|+.|++.+++++||+++|+|||||+||++||
T Consensus 177 ~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGkn~~iV~~dA 256 (482)
T cd07119 177 TIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKKVALELGGKNPNIVFADA 256 (482)
T ss_pred HHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEECCCC
Confidence 99999999999 999999999984 45789999995 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHH
Q 011107 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 239 Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
|+|.|++.+++++| .|+||.|+++++||||+++||+|+++|++++++++.|+|. +++++||++++.++++++++++++
T Consensus 257 Dl~~Aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gpli~~~~~~~~~~~i~~a 335 (482)
T cd07119 257 DFETAVDQALNGVF-FNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLG 335 (482)
T ss_pred CHHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999988884 678999999999999999999998
Q ss_pred Hh-CCeEEeCCccCC-----CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCH
Q 011107 318 KV-SGKIVHGGERDK-----NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 391 (493)
Q Consensus 318 ~~-~~~~~~gg~~~~-----~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~ 391 (493)
.+ ++++++||.... .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 336 ~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~ 415 (482)
T cd07119 336 KEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDI 415 (482)
T ss_pred HHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCH
Confidence 65 669999997532 589999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 392 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 392 ~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|+++.
T Consensus 416 ~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~~~ 474 (482)
T cd07119 416 ARANRVARRLRAGTVWINDYHP--YFAEAPWGGYKQSGIGRELGPTGLEEYQETKHININL 474 (482)
T ss_pred HHHHHHHHhcCcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence 9999999999999999998643 4678999999999999999999999999999998865
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-90 Score=722.54 Aligned_cols=441 Identities=28% Similarity=0.405 Sum_probs=408.6
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhh-cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFAS-GKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
+++++++++..+.++++.++++|++|+.. |+.+|.++|.++|++++++|++++++|++++++|+|||..++...|+..+
T Consensus 32 tg~~i~~~~~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~ 111 (484)
T cd07144 32 TGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEI 111 (484)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 47899999999999999999999999996 88999999999999999999999999999999999999877644699999
Q ss_pred HHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHH
Q 011107 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~ 162 (493)
++.++++++..+.+.. +.... ..+...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++
T Consensus 112 ~~~l~~~~~~~~~~~g-~~~~~---~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~ 187 (484)
T cd07144 112 IAVIRYYAGWADKIQG-KTIPT---SPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSL 187 (484)
T ss_pred HHHHHHHHHHHHHhcC-ceecC---CCCceEEEEEecceEEEEECcCCCHHHHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence 9999999988877632 21111 1233457889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCC
Q 011107 163 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (493)
Q Consensus 163 ~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daD 239 (493)
..+.+++.++ +|+|++|+|+| +.+.+..|+.|+ +|.|.||||+.+|+.|++.+++++||+++|+|||||+||++|||
T Consensus 188 ~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~~~~~~~lElGGk~p~iV~~dAD 267 (484)
T cd07144 188 LYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQNLKAVTLECGGKSPALVFEDAD 267 (484)
T ss_pred HHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCeEEEEcCCCCeEEECCCCC
Confidence 9999999999 99999999999 567889999995 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHh-hcCCCC-CCCCcccccCCHHHHHHHHHHHHHH
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN-FYGKNP-LESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
++.|++.+++++| +|+||.|+++++||||+++||+|+++|++++++ ++.|+| ++++++||++++.+++++.++++++
T Consensus 268 l~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a 346 (484)
T cd07144 268 LDQAVKWAAAGIM-YNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKG 346 (484)
T ss_pred HHHHHHHHHHHHH-hcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHH
Confidence 9999999999999 999999999999999999999999999999985 788888 4789999999999999999999998
Q ss_pred Hh-CCeEEeCCccCC----CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 011107 318 KV-SGKIVHGGERDK----NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (493)
Q Consensus 318 ~~-~~~~~~gg~~~~----~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~ 392 (493)
.+ ++++++||.... .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+
T Consensus 347 ~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~ 426 (484)
T cd07144 347 KKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIR 426 (484)
T ss_pred HHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 65 679999987632 5889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 393 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 393 ~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
.+.++++++++|+|+||+++. ..+.+||||+|.||+|+++|++++++||+.|+|.++
T Consensus 427 ~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 483 (484)
T cd07144 427 RAHRVARELEAGMVWINSSND--SDVGVPFGGFKMSGIGRELGEYGLETYTQTKAVHIN 483 (484)
T ss_pred HHHHHHHhcCcCEEEECCCCC--CCCCCCcCCcccCcCCCCchHHHHHHhhceEEEEEe
Confidence 999999999999999998654 457799999999999999999999999999999764
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-90 Score=718.05 Aligned_cols=441 Identities=27% Similarity=0.392 Sum_probs=410.3
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+++++++++|++|+..|+.+|.++|.++|++++++|++++++|++++++|+|||..++...|+..++
T Consensus 6 t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~i 85 (453)
T cd07115 6 TGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDVPRAA 85 (453)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999998756999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+..... ... ...+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 86 ~~l~~~~~~~~~~~g~-~~~---~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~ 161 (453)
T cd07115 86 DTFRYYAGWADKIEGE-VIP---VRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSAL 161 (453)
T ss_pred HHHHHHHHHHHHhcCc-eec---CCCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHH
Confidence 9999998776654321 111 112345688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+.+++.++ +|+|++|+++| +.+.++.|+.|+ +|.|+||||+++|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 162 ~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~iV~~dAdl 241 (453)
T cd07115 162 RIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFADADL 241 (453)
T ss_pred HHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCceEECCCCCH
Confidence 999999999 99999999999 556788999995 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|. +++++||++++.+++++.++|+++..
T Consensus 242 ~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~ 320 (453)
T cd07115 242 DAAVRAAATGIF-YNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGRE 320 (453)
T ss_pred HHHHHHHHHHHH-hccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999985 78899999999999999999999865
Q ss_pred -CCeEEeCCccCC-CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 320 -SGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 320 -~~~~~~gg~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
++++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++
T Consensus 321 ~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~~~~ 400 (453)
T cd07115 321 EGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRV 400 (453)
T ss_pred CCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHH
Confidence 569999997643 588999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|+|.++
T Consensus 401 ~~~l~~G~v~iN~~~~--~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 401 AAALKAGTVWINTYNR--FDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWVN 452 (453)
T ss_pred HHhcCccEEEECCCCC--CCCCCCCCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 9999999999998543 567899999999999999999999999999998753
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-90 Score=718.35 Aligned_cols=439 Identities=23% Similarity=0.363 Sum_probs=411.4
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.+|++++++..+.+|+++++++|++|++.|+.+|.++|.++|++++++|+++.++|+++++.|+|||..+++ .|+..++
T Consensus 5 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ev~~~~ 83 (452)
T cd07102 5 DGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAG-GEIRGML 83 (452)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999986 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++.++++........ ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~ 160 (452)
T cd07102 84 ERARYMISIAEEALADIRVPE---KDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGE 160 (452)
T ss_pred HHHHHHHHHHHHhcCCcccCC---CCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 999999998887765433221 12345678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+.+++.++ +|+|++|+++|+.+.+..|++|+ ++.|.||||+++|+.|++.++++++|+.+|+|||||+||++|||+|
T Consensus 161 ~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~iV~~dADl~ 240 (452)
T cd07102 161 RFAAAFAEAGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPDADLD 240 (452)
T ss_pred HHHHHHHhcCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEEcCCCCHH
Confidence 999999999 99999999999668899999995 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| +|+||.|+++++||||++++|+|+++|++++.++++|+|. +++++||++++.+++++.++++++..
T Consensus 241 ~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ 319 (452)
T cd07102 241 AAAESLVDGAF-FNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAK 319 (452)
T ss_pred HHHHHHHHHHH-HhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhC
Confidence 99999999999 9999999999999999999999999999999999999984 68899999999999999999999865
Q ss_pred CCeEEeCCcc----CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 011107 320 SGKIVHGGER----DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (493)
Q Consensus 320 ~~~~~~gg~~----~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 395 (493)
++++++||.. +..|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+++.
T Consensus 320 ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~ 399 (452)
T cd07102 320 GARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAE 399 (452)
T ss_pred CCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 6799999864 236899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 396 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 396 ~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 400 ~~~~~l~~G~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 400 ALGEQLETGTVFMNRCDY--LDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred HHHHHcCcceEEECCCCC--CCCCCCCCCccccccCccchHHHHHHHhceeEEe
Confidence 999999999999998753 4577899999999999999999999999999985
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-89 Score=718.43 Aligned_cols=447 Identities=29% Similarity=0.453 Sum_probs=411.3
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++|++.|+++|.++|.++|++++++|.+++++|++++++|+|||..+++..|+..++
T Consensus 5 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~~~~~ 84 (465)
T cd07098 5 TGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEILVTC 84 (465)
T ss_pred CCCeeEEeeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 58899999999999999999999999999999999999999999999999999999999999999999998767999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++....+.................++.++|+|||++|+|||||+..++.++++||++||+||+|||+.+|+++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~ 164 (465)
T cd07098 85 EKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSG 164 (465)
T ss_pred HHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHH
Confidence 99999998877655432221110012334578899999999999999999999999999999999999999999999999
Q ss_pred HHHHHH----hhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCC
Q 011107 164 LLAKLV----GEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 164 ~l~~~l----~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~d 237 (493)
.+++++ .++ +|+|+||+++|+.+.+..|+.|+ |+.|.||||+++|+.|.+.+++++||+++|+|||||+||++|
T Consensus 165 ~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~~~~iV~~d 244 (465)
T cd07098 165 FFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAIVLDD 244 (465)
T ss_pred HHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECCC
Confidence 877665 456 89999999999668899999995 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
||+|.|++.+++++| .|+||.|+++++||||++++|+|+++|++++..++.|+| ++++++||++++.+++++.+++++
T Consensus 245 adl~~a~~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~ 323 (465)
T cd07098 245 ADLDQIASIIMRGTF-QSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVAD 323 (465)
T ss_pred CCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999999999999988 478999999999999999999999
Q ss_pred HHh-CCeEEeCCccC-----CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCC
Q 011107 317 DKV-SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390 (493)
Q Consensus 317 a~~-~~~~~~gg~~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 390 (493)
+.. ++++++||... ..|+|++|||+++++++|++++||+||||++|++|+|+|||++++|+++|||+++|||+|
T Consensus 324 a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d 403 (465)
T cd07098 324 AVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKD 403 (465)
T ss_pred HHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 865 67999998642 248999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 391 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 391 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
.+.++++++++++|.|+||.++.+...+.+||||+|.||+|+++|++++++||+.|+|.++
T Consensus 404 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~ 464 (465)
T cd07098 404 IKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTED 464 (465)
T ss_pred HHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEe
Confidence 9999999999999999999876555567899999999999999999999999999999764
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-90 Score=720.95 Aligned_cols=439 Identities=24% Similarity=0.361 Sum_probs=409.7
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhh--cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFAS--GKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (493)
+++++++++.++.+++++++++|++||+. |+.+|.++|.++|++++++|+++.++|++++++|+|||..++...|+..
T Consensus 23 tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~ 102 (471)
T cd07139 23 TEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPG 102 (471)
T ss_pred CCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 57899999999999999999999999984 9999999999999999999999999999999999999998876569999
Q ss_pred HHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
+++.++++++..+++...+.... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~~p~~ 179 (471)
T cd07139 103 PAALLRYYAALARDFPFEERRPG---SGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLD 179 (471)
T ss_pred HHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcCCHH
Confidence 99999999988876643332211 123456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCC
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daD 239 (493)
+..+.+++.++ +|+|++|+++|+.+.+..|+.|+ ++.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||
T Consensus 180 ~~~l~~~~~~aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~~~~~~~lElGG~np~iV~~dAD 259 (471)
T cd07139 180 AYLLAEAAEEAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGERLARVTLELGGKSAAIVLDDAD 259 (471)
T ss_pred HHHHHHHHHHcCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCEEEEEcCCCCeeEECCCCC
Confidence 99999999999 99999999999777889999996 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHH
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (493)
+|.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|. +++++||++++++++++.++++++.
T Consensus 260 l~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~ 338 (471)
T cd07139 260 LDAAVPGLVPASL-MNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGR 338 (471)
T ss_pred HHHHHHHHHHHHH-hcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999985 6789999999999999999999886
Q ss_pred h-CCeEEeCCccCC---CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 319 V-SGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 319 ~-~~~~~~gg~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
. ++++++||..+. .++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+
T Consensus 339 ~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~s~d~~~~ 418 (471)
T cd07139 339 AEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERG 418 (471)
T ss_pred HCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHH
Confidence 5 669999997533 488999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
.++++++++|+|+||++. ..+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus 419 ~~~~~~l~~G~v~iN~~~---~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~ 470 (471)
T cd07139 419 LAVARRIRTGTVGVNGFR---LDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470 (471)
T ss_pred HHHHHhCCcceEEECCCC---CCCCCCCCCcccccCCccchHHHHHHHhceeEEe
Confidence 999999999999999865 3578999999999999999999999999999985
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-89 Score=718.77 Aligned_cols=434 Identities=27% Similarity=0.425 Sum_probs=406.8
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+++++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++..|+..++
T Consensus 23 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~ 102 (466)
T cd07138 23 TEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGI 102 (466)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999988656999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++.++.+.... .....++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.
T Consensus 103 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~ 174 (466)
T cd07138 103 GHLRAAADALKDFEFEE--------RRGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAI 174 (466)
T ss_pred HHHHHHHHhhhhccccc--------cCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHH
Confidence 99999998877653321 1234577899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+.+++.++ +|+|+||+++| +.+.+..|+.|+ ++.|.||||+++|+.|.+.++.+++|+++|+|||||+||++|||+
T Consensus 175 ~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~v~lElgG~~p~iV~~dADl 254 (466)
T cd07138 175 ILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADTVKRVALELGGKSANIILDDADL 254 (466)
T ss_pred HHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEECCCCCH
Confidence 999999999 99999999998 456789999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| +|+||.|+++++||||++++|+|+++|++++++++.|||. +++++||++++.+++++.++++++.+
T Consensus 255 ~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~v~~a~~ 333 (466)
T cd07138 255 EKAVPRGVAACF-ANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIE 333 (466)
T ss_pred HHHHHHHHHHHH-hccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCccCCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999995 68999999999999999999999865
Q ss_pred -CCeEEeCCccC----CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 320 -SGKIVHGGERD----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 320 -~~~~~~gg~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++
T Consensus 334 ~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~a 413 (466)
T cd07138 334 EGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERA 413 (466)
T ss_pred CCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEEcCCHHHH
Confidence 67999998632 2589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
.++++++++|+|+||+.. ..+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 414 ~~~~~~l~~G~v~iN~~~---~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 414 RAVARRLRAGQVHINGAA---FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred HHHHHhcCcceEEECCCC---CCCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence 999999999999999853 4578999999999999999999999999999874
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-89 Score=718.68 Aligned_cols=436 Identities=25% Similarity=0.386 Sum_probs=405.7
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+++++++++|++|++.|+.+|.++|.++|++++++|++++++|++++++|+|||..++...|+..++
T Consensus 22 t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 101 (467)
T TIGR01804 22 NQEVIATVAEATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKLETLDTGKTLEETSVADMDDIA 101 (467)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999998556999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+.... ..... ......+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 102 ~~l~~~a~~~~~~~~-~~~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~ 177 (467)
T TIGR01804 102 DVFEFFAGLADKDGG-EIIPL---PIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSEITPLTAL 177 (467)
T ss_pred HHHHHHHHHHHHhCC-ccccC---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCccCcHHHH
Confidence 999999988776432 11111 11234578899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+++++.++ +|+|++|+++|+ .+.+..|+.|+ +|.|.||||+++|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 178 ~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~l~~~~lElGG~~~~iV~~dADl 257 (467)
T TIGR01804 178 KVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAADHLKHVTMELGGKSPLIVFDDADL 257 (467)
T ss_pred HHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEecCCCCeeEECCCCCH
Confidence 999999999 999999999984 77889999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| +|+||.|+++++||||+++||+|+++|+++++++++|+|. +++++||++++.+++++.++++++..
T Consensus 258 ~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~ 336 (467)
T TIGR01804 258 ELAVDQAMNGNF-FSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGPLISAEHRDKVESYIEKGKE 336 (467)
T ss_pred HHHHHHHHHHHH-HhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCccCCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999984 78899999999999999999998865
Q ss_pred -CCeEEeCCccCC-----CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 320 -SGKIVHGGERDK-----NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 320 -~~~~~~gg~~~~-----~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
++++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++
T Consensus 337 ~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~ 416 (467)
T TIGR01804 337 EGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIARANDTIYGLAAGVFTADLGR 416 (467)
T ss_pred CCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence 679999997532 47899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhcc
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 446 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k 446 (493)
+.++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|
T Consensus 417 ~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 417 AHRVANQLKAGTVWINDFHP--YPAEAPWGGYKQSGIGRENGKAGLAEYTEVK 467 (467)
T ss_pred HHHHHHhCCcceEEECCCCC--CCCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence 99999999999999998654 4567899999999999999999999999875
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-89 Score=707.53 Aligned_cols=427 Identities=38% Similarity=0.676 Sum_probs=393.9
Q ss_pred HHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCC-chhhhHHHHHHHHHHHHHHHHHHHhhcCC
Q 011107 21 LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKP-ELESSIYEVALLKTSIKSALKELKHWMTP 99 (493)
Q Consensus 21 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~-~~~a~~~ev~~~~~~~~~~~~~~~~~~~~ 99 (493)
..+++|++||+.|+.+|..+|.++|++++++|++++++|++++++|+||+ ..++...|+..+++.+++++..+..+..+
T Consensus 2 ~~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~ 81 (434)
T cd07133 2 ALLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKP 81 (434)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 35788999999999999999999999999999999999999999999985 56765569999999999999988877654
Q ss_pred cccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhhcCCCcEE
Q 011107 100 EKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIR 179 (493)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~alP~g~v~ 179 (493)
..........+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.+++|+|+||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~alP~g~~~ 161 (434)
T cd07133 82 SRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEYFDEDEVA 161 (434)
T ss_pred cccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCcCeEE
Confidence 42221111123456889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCChHhHHHHHhCCCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHHHHhhcccCCCCc
Q 011107 180 VVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQA 259 (493)
Q Consensus 180 vv~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~~~~~~~~Gq~ 259 (493)
+++|+.+.+..|++|++|.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| +|+||.
T Consensus 162 ~v~g~~~~~~~l~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~-~~~GQ~ 240 (434)
T cd07133 162 VVTGGADVAAAFSSLPFDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKL-LNAGQT 240 (434)
T ss_pred EEeCChHHHHHHHhCCCCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHh-ccCCCc
Confidence 9999777888888778999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred ccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHh-CCeEEeCCccC---CCCce
Q 011107 260 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERD---KNKLR 335 (493)
Q Consensus 260 C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~~~~gg~~~---~~g~~ 335 (493)
|+++++||||++++|+|+++|+++++++++|+ .+++++||++++.+++++.++++++++ ++++++||... .+|+|
T Consensus 241 C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~-~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~ 319 (434)
T cd07133 241 CVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL-ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRK 319 (434)
T ss_pred ccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC-CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCCCCCcE
Confidence 99999999999999999999999999998876 577899999999999999999999865 67999998653 35899
Q ss_pred eeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcccceEEEcCCCccc
Q 011107 336 IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHL 415 (493)
Q Consensus 336 ~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~ 415 (493)
++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+++.+.
T Consensus 320 ~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~ 399 (434)
T cd07133 320 LPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLLHV 399 (434)
T ss_pred EeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999876555
Q ss_pred CCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 416 AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 416 ~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
..+.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 400 ~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 400 AQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred CCCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence 5678999999999999999999999999999874
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-89 Score=715.82 Aligned_cols=438 Identities=25% Similarity=0.407 Sum_probs=408.9
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+++++++++|++|+..|+.+|.++|.++|++++++|+++.++|+++++.|+|||..+++ .|+..++
T Consensus 8 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 86 (451)
T cd07150 8 DGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAW-FETTFTP 86 (451)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999986 4999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+..... ..+. ...+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 87 ~~l~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~t~~ 163 (451)
T cd07150 87 ELLRAAAGECRRVRGE-TLPS--DSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGL 163 (451)
T ss_pred HHHHHHHHHHHHhcCc-cccC--CCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcHHHH
Confidence 9999999887765332 1111 112345678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+.+++.++ +|+|++|+++| +.+.+..|+.|+ ++.|.||||+++|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 164 ~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~dadl 243 (451)
T cd07150 164 KIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLADADL 243 (451)
T ss_pred HHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCCCCh
Confidence 999999999 99999999998 567889999985 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|. +++++||++++++++++.++++++..
T Consensus 244 ~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~ 322 (451)
T cd07150 244 DYAVRAAAFGAF-MHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVA 322 (451)
T ss_pred HHHHHHHHHHHH-hhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence 999999999999 9999999999999999999999999999999999999985 67899999999999999999999865
Q ss_pred -CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 011107 320 -SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (493)
Q Consensus 320 -~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 398 (493)
++++++||.. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 323 ~Ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~~~~~~ 400 (451)
T cd07150 323 KGAKLLTGGKY--DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLA 400 (451)
T ss_pred CCCEEEeCCcc--CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHH
Confidence 6799999865 4889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 399 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 399 ~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
+++++|.|+||+++.+ ..+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 401 ~~l~~G~v~iN~~~~~-~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~ 450 (451)
T cd07150 401 ERLESGMVHINDPTIL-DEAHVPFGGVKASGFGREGGEWSMEEFTELKWIT 450 (451)
T ss_pred HhcCcCEEEECCCCCC-CCCCCCcCCccccccCcCCcHHHHHHhheeeEEe
Confidence 9999999999998754 4577999999999999999999999999999985
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-89 Score=717.24 Aligned_cols=440 Identities=21% Similarity=0.310 Sum_probs=405.1
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+++++++++|++||+.|+++|.++|.++|++++++|+++.++|+++++.|+|||..+++ .|+..++
T Consensus 24 t~~~i~~~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 102 (487)
T PRK09457 24 SGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAEVIARETGKPLWEAA-TEVTAMI 102 (487)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 468999999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++.+..+..... . ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.
T Consensus 103 ~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKPs~~tp~t~~ 178 (487)
T PRK09457 103 NKIAISIQAYHERTGEKR-S---EMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAE 178 (487)
T ss_pred HHHHHHHHHHHHhcCcee-c---cCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 999998888776654322 1 112345688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhcc-ccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH-LTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~-~~~~~~elgG~~p~iV~~daDl 240 (493)
.+++++.++ +|+|++|+|+|+.+.+..|+.|+ ++.|.||||+++|+.|++.++.+ .+++++|+|||||+||++|||+
T Consensus 179 ~l~~l~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~~lElGGk~p~IV~~dADl 258 (487)
T PRK09457 179 LTVKLWQQAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADI 258 (487)
T ss_pred HHHHHHHHhCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCCcEEEecCCCCeEEECCCCCH
Confidence 999999999 99999999999878899999995 99999999999999999987755 5778999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcch-HHHHHHHHHHHHhhcCCCCC--CCCcccccCCHHHHHHHHHHHHHH
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYA-PKLLESLKNELENFYGKNPL--ESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~g~~~--~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
+.|++.+++++| .|+||.|++++|||||+++| |+|+++|+++++++++|+|. +++++||++++.+++++.++++++
T Consensus 259 ~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~~~Gpli~~~~~~~v~~~i~~a 337 (487)
T PRK09457 259 DAAVHLIIQSAF-ISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQL 337 (487)
T ss_pred HHHHHHHHHHHh-hccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCCccCCCcCHHHHHHHHHHHHHH
Confidence 999999999999 99999999999999999998 99999999999999999983 678999999999999999999998
Q ss_pred Hh-CCeEEeCCcc-CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 011107 318 KV-SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (493)
Q Consensus 318 ~~-~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 395 (493)
.+ ++++++||.. +.+|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++
T Consensus 338 ~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~ 416 (487)
T PRK09457 338 LALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYD 416 (487)
T ss_pred HHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 65 6798888764 345789999999 69999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 396 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 396 ~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++++|+|+||+...+ ..+.+||||+|.||+|+++|..+ .+|++.|+++++.
T Consensus 417 ~~~~~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~-~~~~~~k~~~~~~ 471 (487)
T PRK09457 417 QFLLEIRAGIVNWNKPLTG-ASSAAPFGGVGASGNHRPSAYYA-ADYCAYPMASLES 471 (487)
T ss_pred HHHHhCCcceEEEECCCCC-CCCCCCCCCcccccCCCCCchhH-hhheeeeEEEEec
Confidence 9999999999999987654 45679999999999999999555 5599999998874
|
|
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-89 Score=718.12 Aligned_cols=439 Identities=29% Similarity=0.393 Sum_probs=407.1
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcC--CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGK--TKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~--~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (493)
+++++++++.++.++++.++++|++||..|+ .+|.++|.++|++++++|++++++|++++++|+|||..++...|+..
T Consensus 28 t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~ 107 (476)
T cd07091 28 TEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVAL 107 (476)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 5789999999999999999999999999855 99999999999999999999999999999999999987765569999
Q ss_pred HHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
+++.+++++...+..... .... ..+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+
T Consensus 108 ~~~~~~~~a~~~~~~~~~-~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL~aGN~VvlKps~~~p~~ 183 (476)
T cd07091 108 SIKCLRYYAGWADKIQGK-TIPI---DGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLS 183 (476)
T ss_pred HHHHHHHHHHHHHHhcCc-cccC---CCCceEEEEEeceeEEEEECCCcCHHHHHHHHHHHHHHcCCEEEEeCCCCChHH
Confidence 999999998776554322 1111 123456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhc-cccchhhhcCCCCeEEEcCC
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~-~~~~~~~elgG~~p~iV~~d 237 (493)
+..+.+++.++ +|+|++|+|+| +.+.+..|+.|+ +|.|+||||+++|+.|++.++. +++|+++|+|||||+||++|
T Consensus 184 ~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~~lElgG~~~~iV~~d 263 (476)
T cd07091 184 ALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKSNLKKVTLELGGKSPNIVFDD 263 (476)
T ss_pred HHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEEecCCCCeEEECCC
Confidence 99999999999 99999999998 566788999985 9999999999999999999987 88999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
||++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.+++++
T Consensus 264 ADl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~ 342 (476)
T cd07091 264 ADLDKAVEWAAFGIF-FNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIES 342 (476)
T ss_pred CCHHHHHHHHHHHHH-hccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999999999999998 478999999999999999999999
Q ss_pred HHh-CCeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 317 DKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 317 a~~-~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
+.. ++++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|++||++++|+++|||+++|||+|.+++
T Consensus 343 a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~~ 422 (476)
T cd07091 343 GKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKA 422 (476)
T ss_pred HHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 865 56999999764 3689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
.++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|+|.
T Consensus 423 ~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~ 475 (476)
T cd07091 423 LRVSRALKAGTVWVNTYNV--FDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVT 475 (476)
T ss_pred HHHHHhcCcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHhhceeEEe
Confidence 9999999999999998643 5678999999999999999999999999999985
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-89 Score=714.46 Aligned_cols=439 Identities=25% Similarity=0.383 Sum_probs=409.0
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (493)
.++++++++.++.+++++++++|++||+ .|+.+|.++|.++|++++++|++++++|++++++|+|||..++...|+..
T Consensus 11 t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 90 (462)
T cd07112 11 TGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPISDALAVDVPS 90 (462)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 4789999999999999999999999997 49999999999999999999999999999999999999999986569999
Q ss_pred HHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
+++.+++++..++.+.... .+ ...+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~ 166 (462)
T cd07112 91 AANTFRWYAEAIDKVYGEV-AP---TGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLT 166 (462)
T ss_pred HHHHHHHHHHHHHHhcCce-ec---CCCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCCCCCHH
Confidence 9999999999888765421 11 1123456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHh-ccccchhhhcCCCCeEEEcCC
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~-~~~~~~~~elgG~~p~iV~~d 237 (493)
+..+++++.++ +|+|++|+++| +.+.+..|+.|+ ++.|.||||+++|+.|++.++ .++||+++|+||+||+||++|
T Consensus 167 ~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~~iV~~d 246 (462)
T cd07112 167 ALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPNIVFAD 246 (462)
T ss_pred HHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCeEEECCC
Confidence 99999999999 99999999999 567889999885 999999999999999999888 489999999999999999999
Q ss_pred C-CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 011107 238 I-NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (493)
Q Consensus 238 a-Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~ 315 (493)
+ |+|.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|. +++++||++++.+++++.++|+
T Consensus 247 a~dl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~ 325 (462)
T cd07112 247 APDLDAAAEAAAAGIF-WNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVLGYIE 325 (462)
T ss_pred CcCHHHHHHHHHHHHH-hccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 9 99999999999999 9999999999999999999999999999999999999985 6899999999999999999999
Q ss_pred HHHh-CCeEEeCCccCC---CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCH
Q 011107 316 DDKV-SGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 391 (493)
Q Consensus 316 ~a~~-~~~~~~gg~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~ 391 (493)
++.+ ++++++||.... .|+|+.|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.
T Consensus 326 ~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~ 405 (462)
T cd07112 326 SGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDL 405 (462)
T ss_pred HHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEEcCCH
Confidence 9865 679999987532 588999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 392 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 392 ~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
+.+.++++++++|+|+||++.. ..+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 406 ~~~~~~~~~l~~g~v~iN~~~~--~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 461 (462)
T cd07112 406 SRAHRVARRLRAGTVWVNCFDE--GDITTPFGGFKQSGNGRDKSLHALDKYTELKTTW 461 (462)
T ss_pred HHHHHHHHhcCcceEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHHhceeEEE
Confidence 9999999999999999998654 4578999999999999999999999999999985
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-89 Score=713.57 Aligned_cols=440 Identities=24% Similarity=0.399 Sum_probs=406.0
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+++++++++|++|++.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..++
T Consensus 8 t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~ 86 (452)
T cd07147 8 TGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDAR-GEVARAI 86 (452)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcCCccc-ccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHH
Q 011107 84 TSIKSALKELKHWMTPEKA-KTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~ 162 (493)
+.+++++..+.++...... .......+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~ 166 (452)
T cd07147 87 DTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSA 166 (452)
T ss_pred HHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHH
Confidence 9999999888766432111 100011233457789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 163 SLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 163 ~~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
..+.+++.++ +|+|+||+++|+.+.+..|+.|+ ++.|.||||+++|+.|.+.++. +|+++|+|||||+||++|||+
T Consensus 167 ~~l~~~l~~ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~--~~v~lelgG~~p~iV~~dadl 244 (452)
T cd07147 167 LILGEVLAETGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK--KKVVLELGGNAAVIVDSDADL 244 (452)
T ss_pred HHHHHHHHHcCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCc--CceEeecCCCCcEEECCCCCH
Confidence 9999999999 99999999999777889999885 9999999999999999987763 799999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| +|+||.|+++++||||++++|+|+++|++++++++.|+|. +++++||++++.+++++.++++++.+
T Consensus 245 ~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~ 323 (452)
T cd07147 245 DFAAQRIIFGAF-YQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVD 323 (452)
T ss_pred HHHHHHHHHHHH-hccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999884 67899999999999999999999865
Q ss_pred -CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 011107 320 -SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (493)
Q Consensus 320 -~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 398 (493)
++++++||.. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 324 ~Ga~~l~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~a~~~~ 401 (452)
T cd07147 324 AGAKLLTGGKR--DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAW 401 (452)
T ss_pred CCCEEEecCCc--CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 6799999875 4889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeE
Q 011107 399 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 450 (493)
Q Consensus 399 ~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~ 450 (493)
+++++|+|+||+.+.. ..+.+||||+|.||+|+++|.+|+++||+.|+|++
T Consensus 402 ~~~~~G~v~vN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 402 DELEVGGVVINDVPTF-RVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred HHcCcceEEECCCCCC-CCCCCCcCCccccccCCCChHHHHHHhcceeEEeC
Confidence 9999999999986642 35679999999999999999999999999999864
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-89 Score=716.40 Aligned_cols=441 Identities=25% Similarity=0.396 Sum_probs=409.3
Q ss_pred hhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHH
Q 011107 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT 84 (493)
Q Consensus 5 ~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~ 84 (493)
++++++++.++.+|+++++++|++|+..|+.++.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++
T Consensus 25 ~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~-~ev~~~i~ 103 (478)
T cd07131 25 EEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELARLVTREMGKPLAEGR-GDVQEAID 103 (478)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999997 59999999
Q ss_pred HHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHH
Q 011107 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (493)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~ 164 (493)
.+++++...+.... +..... ......+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..
T Consensus 104 ~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~ 180 (478)
T cd07131 104 MAQYAAGEGRRLFG-ETVPSE--LPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALK 180 (478)
T ss_pred HHHHHHHHHHHhCC-cccccC--CCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHH
Confidence 99999888776432 222111 112346789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 165 LAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 165 l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
+.+++.++ +|+|+||+++| +.+.+..|+.|+ +|.|+||||+++|+.|++.+++++||+++|+|||||+||++|||+|
T Consensus 181 l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dADl~ 260 (478)
T cd07131 181 LVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKRVALEMGGKNPIIVMDDADLD 260 (478)
T ss_pred HHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeEEECCCCCHH
Confidence 99999999 99999999999 555889999995 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| +|+||.|+++++||||+++||+|+++|++++++++.|+|. +++++||++++.+++++.++++++.+
T Consensus 261 ~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 339 (478)
T cd07131 261 LALEGALWSAF-GTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEE 339 (478)
T ss_pred HHHHHHHHHHH-hcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCcCCcCCCHHHHHHHHHHHHHHHHC
Confidence 99999999999 9999999999999999999999999999999999999885 67899999999999999999999865
Q ss_pred CCeEEeCCccC-----CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 320 SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 320 ~~~~~~gg~~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++
T Consensus 340 Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a 419 (478)
T cd07131 340 GATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKA 419 (478)
T ss_pred CCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHH
Confidence 67999998652 3588999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCC-CcchHHHHHHhhhccEEeEe
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G-~~~g~~~~~~~t~~k~v~~~ 451 (493)
+++++++++|+|+||+++.+ ..+.+||||+|.||+| +++|.+++++||+.|+|+++
T Consensus 420 ~~~~~~l~~G~v~iN~~~~~-~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i~~~ 476 (478)
T cd07131 420 FRARRDLEAGITYVNAPTIG-AEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVYVD 476 (478)
T ss_pred HHHHHhcCccEEEECCCCCC-CCCCCCCCCcccccCCCcCCcHHHHHHhhheEEEEEe
Confidence 99999999999999987654 4578999999999999 78899999999999999764
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-89 Score=712.84 Aligned_cols=438 Identities=27% Similarity=0.430 Sum_probs=406.4
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+|+++++++|++|+..|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 8 t~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~ 86 (453)
T cd07094 8 DGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDAR-VEVDRAI 86 (453)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccc--cccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTS--ITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
+.++++++.++++.... .+.. ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 87 ~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~~~p~~ 165 (453)
T cd07094 87 DTLRLAAEEAERIRGEE-IPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLS 165 (453)
T ss_pred HHHHHHHHHHHHhcCcc-ccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcchHH
Confidence 99999999888775321 1111 00123456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCC
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~da 238 (493)
+..+++++.++ +|+|++|+++|+ .+.+..|++|+ ++.|.||||+++|+.|++.+ .++|+++|+|||||+||++||
T Consensus 166 ~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a--~~~~~~lelGGk~~~iV~~da 243 (453)
T cd07094 166 ALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA--GGKRIALELGGNAPVIVDRDA 243 (453)
T ss_pred HHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc--CCCceEEecCCCCceEECCCC
Confidence 99999999998 999999999994 45689999996 99999999999999999877 579999999999999999999
Q ss_pred CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHH
Q 011107 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 239 Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
|++.|++.+++++| +|+||.|+++++||||++++|+|+++|++++++++.|+|. +++++||++++.+++++.++++++
T Consensus 244 dl~~aa~~i~~~~~-~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a 322 (453)
T cd07094 244 DLDAAIEALAKGGF-YHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEA 322 (453)
T ss_pred CHHHHHHHHHHHHH-HhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999985 678999999999999999999998
Q ss_pred Hh-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHH
Q 011107 318 KV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396 (493)
Q Consensus 318 ~~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 396 (493)
.+ ++++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+++.+
T Consensus 323 ~~~Ga~v~~gg~~--~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~ 400 (453)
T cd07094 323 VEAGARLLCGGER--DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFK 400 (453)
T ss_pred HHCCCEEEeCccC--CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECCCHHHHHH
Confidence 65 6699999864 57899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 397 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 397 ~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
+++++++|+|+||+++.. ..+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 401 ~~~~l~~g~v~iN~~~~~-~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~ 452 (453)
T cd07094 401 AAEKLEVGGVMVNDSSAF-RTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV 452 (453)
T ss_pred HHHhcCcCeEEEcCCCCC-CCCCCCCCCccccccCcCChHHHHHHHhceeEEe
Confidence 999999999999997642 4578999999999999999999999999999985
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-89 Score=714.66 Aligned_cols=439 Identities=24% Similarity=0.387 Sum_probs=407.7
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+++++++++|++|+..|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 22 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~ 100 (468)
T cd07088 22 TGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKLIVEEQGKTLSLAR-VEVEFTA 100 (468)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++.......... ... ...+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 101 ~~l~~~~~~a~~~~~~~-~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VVlKps~~~p~~~~ 177 (468)
T cd07088 101 DYIDYMAEWARRIEGEI-IPS--DRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNAL 177 (468)
T ss_pred HHHHHHHHHHHHhCCcc-ccC--ccccceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHH
Confidence 99999988776543321 111 112345678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+++++.++ +|+|++|+++|+ .+.+..|++|+ +|.|.||||+++|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 178 ~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~dadl 257 (468)
T cd07088 178 EFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVSLELGGKAPAIVMKDADL 257 (468)
T ss_pred HHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCH
Confidence 999999999 999999999994 45788999985 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| +|+||.|+++++||||++++|+|+++|++++++++.|+|. +++++||++++.+++++.++++++..
T Consensus 258 ~~aa~~iv~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~ 336 (468)
T cd07088 258 DLAVKAIVDSRI-INCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVE 336 (468)
T ss_pred HHHHHHHHHHHh-cccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCcccCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999885 68899999999999999999999865
Q ss_pred -CCeEEeCCccCC--CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHH
Q 011107 320 -SGKIVHGGERDK--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396 (493)
Q Consensus 320 -~~~~~~gg~~~~--~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 396 (493)
++++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|++||++++|+++|||+++|||+|.+++++
T Consensus 337 ~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~ 416 (468)
T cd07088 337 AGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMR 416 (468)
T ss_pred CCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence 679999997643 58999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 397 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 397 ~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
+++++++|+|+||++..+ ....||||+|.||+|+++|++++++||+.|+|.
T Consensus 417 ~~~~l~~g~v~iN~~~~~--~~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 417 ATNELEFGETYINRENFE--AMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY 467 (468)
T ss_pred HHHhCCcceEEECCCCCC--CCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 999999999999987653 345699999999999999999999999999985
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-89 Score=710.64 Aligned_cols=440 Identities=24% Similarity=0.364 Sum_probs=408.7
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++|+..|+.+|.++|.++|++++++|++++++|++++++|+|||..++...|+..++
T Consensus 6 t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~i 85 (450)
T cd07092 6 TGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDELPGAV 85 (450)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999876556999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+...... ... ...+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 86 ~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~ 162 (450)
T cd07092 86 DNFRFFAGAARTLEGPA-AGE--YLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTL 162 (450)
T ss_pred HHHHHHHHHHHHhcCcc-cCc--cCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 99999988766543211 111 011235678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEYMDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~alP~g~v~vv~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+.+++.+.+|+|++|+++|+ .+.+..|++|+ ++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||+|
T Consensus 163 ~l~~~~~~glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p~iV~~dAdl~ 242 (450)
T cd07092 163 LLAELAAEVLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVFDDADLD 242 (450)
T ss_pred HHHHHHHhcCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECCCCCHH
Confidence 999999988999999999984 45788999995 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHhC
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVS 320 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~ 320 (493)
.|++.+++++| +|+||.|+++++||||++++|+|+++|++++++++.|+|. +++++||++++.+++++.++|+++.++
T Consensus 243 ~aa~~iv~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a~~g 321 (450)
T cd07092 243 AAVAGIATAGY-YNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAPAH 321 (450)
T ss_pred HHHHHHHHHHH-hhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHcC
Confidence 99999999999 9999999999999999999999999999999999999885 678999999999999999999998877
Q ss_pred CeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHh
Q 011107 321 GKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 399 (493)
Q Consensus 321 ~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 399 (493)
+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++
T Consensus 322 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~~~~~~~ 401 (450)
T cd07092 322 ARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSA 401 (450)
T ss_pred CEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHH
Confidence 8999999764 368999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 400 TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 400 ~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
++++|+|+||++.. ..+.+||||+|.||+|+++|++++++||+.|+|.
T Consensus 402 ~l~~g~v~iN~~~~--~~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 402 RLDFGTVWVNTHIP--LAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM 449 (450)
T ss_pred hcCccEEEECCCCC--CCCCCCcCCcccCcCCCCChHHHHHHHheeeEEe
Confidence 99999999998765 4578999999999999999999999999999985
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-89 Score=703.26 Aligned_cols=428 Identities=43% Similarity=0.740 Sum_probs=397.6
Q ss_pred HHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhcCCc
Q 011107 21 LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100 (493)
Q Consensus 21 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 100 (493)
+++++|++||..|+.+|..+|.++|++++++|++++++|+++++.|+|||..+++..|+..+++.+++++..+..+....
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPK 81 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 57899999999999999999999999999999999999999999999999999865699999999999998877665443
Q ss_pred ccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhhcCCCcEEE
Q 011107 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRV 180 (493)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~alP~g~v~v 180 (493)
....+....+...++.++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++..+.+++.+++|+|++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a~p~g~v~~ 161 (433)
T cd07134 82 RVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDEVAV 161 (433)
T ss_pred ccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCcCEEEE
Confidence 22211111234568999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCChHhHHHHHhCCCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHHHHhhcccCCCCcc
Q 011107 181 VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 260 (493)
Q Consensus 181 v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~~~~~~~~Gq~C 260 (493)
++|+.+.+..|++|+++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| +++||.|
T Consensus 162 v~g~~~~~~~l~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~-~~~GQ~C 240 (433)
T cd07134 162 FEGDAEVAQALLELPFDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKF-LNAGQTC 240 (433)
T ss_pred EeCChhHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhh-cCcCCcc
Confidence 999778889999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred cCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC--CCCCcccccCCHHHHHHHHHHHHHHHh-CCeEEeCCccCCCCceee
Q 011107 261 ISPDHIITTKDYAPKLLESLKNELENFYGKNP--LESKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDKNKLRIA 337 (493)
Q Consensus 261 ~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~--~~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~~~~gg~~~~~g~~~~ 337 (493)
+++++||||++++|+|+++|+++++++.+++| +.++++||++++.+++++.++++++.+ ++++++||..+.+|+|++
T Consensus 241 ~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~g~~~~ 320 (433)
T cd07134 241 IAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFDAAQRYIA 320 (433)
T ss_pred cCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCEEe
Confidence 99999999999999999999999999988875 578899999999999999999999865 679999998765689999
Q ss_pred ceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcccceEEEcCCCcccCC
Q 011107 338 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAV 417 (493)
Q Consensus 338 Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~ 417 (493)
|||+.+++++|++++||+||||++|++|+|+||+|+++|+++|||+++|||+|.+.++++++++++|.|+||+.+.+...
T Consensus 321 Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~ 400 (433)
T cd07134 321 PTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLN 400 (433)
T ss_pred eEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987655456
Q ss_pred CCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 418 HSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 418 ~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
+.+||||+|.||+|+++|.+++++||+.|+|.
T Consensus 401 ~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 401 PNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL 432 (433)
T ss_pred CCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence 78999999999999999999999999999875
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-89 Score=713.54 Aligned_cols=441 Identities=22% Similarity=0.316 Sum_probs=405.0
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+|++++++.|++|++.|+.++..+|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus 40 t~~~i~~~~~a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~Ev~~~~ 118 (496)
T PLN00412 40 TRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAV-TEVVRSG 118 (496)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999999999999999999996 6999999
Q ss_pred HHHHHHHHHHHhhcCCc-cccc-cccc--CCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCch
Q 011107 84 TSIKSALKELKHWMTPE-KAKT-SITT--FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAP 159 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~-~~~~-~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~ 159 (493)
+.+++++..+.++.... .... .... .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|
T Consensus 119 ~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKPs~~t~ 198 (496)
T PLN00412 119 DLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGA 198 (496)
T ss_pred HHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccCc
Confidence 99999998877665321 1111 0011 122346789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcC
Q 011107 160 ASSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236 (493)
Q Consensus 160 ~~~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~ 236 (493)
.++..+++++.++ +|+|++|+++| +.+.+..|+.|+ ++.|.|||| .+|+.|++.++ ++|+++|+|||||+||++
T Consensus 199 ~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~v~~~a~--~~~~~lElGG~~p~iV~~ 275 (496)
T PLN00412 199 VAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAISKKAG--MVPLQMELGGKDACIVLE 275 (496)
T ss_pred HHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHHHHHHhC--CCcEEEEcCCCceEEEcC
Confidence 9999999999998 99999999998 457788899995 999999999 99999998875 799999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 011107 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 237 daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
|||+|.|++.+++++| +|+||.|++++|||||++++|+|+++|++++++++.|+|.+++++||++++.+++++.+++++
T Consensus 276 dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gp~i~~~~~~~v~~~i~~ 354 (496)
T PLN00412 276 DADLDLAAANIIKGGF-SYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPEDDCDITPVVSESSANFIEGLVMD 354 (496)
T ss_pred CCCHHHHHHHHHHHHH-hcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCccCCCcccCCcCCCcCHHHHHHHHHHHHH
Confidence 9999999999999999 999999999999999999999999999999999999999778899999999999999999999
Q ss_pred HHh-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 011107 317 DKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (493)
Q Consensus 317 a~~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 395 (493)
+.. ++++++||.. .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.
T Consensus 355 a~~~Ga~~l~~~~~--~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~deai~~an~~~~gL~a~v~t~d~~~a~ 432 (496)
T PLN00412 355 AKEKGATFCQEWKR--EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAI 432 (496)
T ss_pred HHHCCCEEEecCCC--CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 865 6688887743 6899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 396 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 396 ~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++++|+|+||++.. ...+.+||||+|.||+|+++|++|+++||+.|+++++.
T Consensus 433 ~~~~~l~~G~v~vN~~~~-~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~~ 488 (496)
T PLN00412 433 LISDAMETGTVQINSAPA-RGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTVINL 488 (496)
T ss_pred HHHHhCCcceEEEcCCCC-CCCCCCCCCCccccccCCCChHHHHHHhcceEEEEEec
Confidence 999999999999998764 24457999999999999999999999999999998763
|
|
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-89 Score=717.60 Aligned_cols=441 Identities=21% Similarity=0.310 Sum_probs=411.2
Q ss_pred hhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHH
Q 011107 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT 84 (493)
Q Consensus 5 ~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~ 84 (493)
++++++++..+.+|+++++++|++|++.|+.++.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..+++
T Consensus 57 g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~i~ 135 (518)
T cd07125 57 ERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANRGELIALAAAEAGKTLADAD-AEVREAID 135 (518)
T ss_pred CceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999996 59999999
Q ss_pred HHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHH
Q 011107 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (493)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~ 164 (493)
.+++++..+++++.....+. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..
T Consensus 136 ~l~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~ 212 (518)
T cd07125 136 FCRYYAAQARELFSDPELPG---PTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAAR 212 (518)
T ss_pred HHHHHHHHHHHhcCCccccC---CCCceeEEEEecccEEEEECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHH
Confidence 99999999888765432221 124456889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh-cCCCcEEEEeCCh-HhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhcc---ccchhhhcCCCCeEEEcCCC
Q 011107 165 LAKLVGEY-MDLSSIRVVEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKSPVVFDSGI 238 (493)
Q Consensus 165 l~~~l~~a-lP~g~v~vv~g~~-~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~---~~~~~~elgG~~p~iV~~da 238 (493)
+++++.++ +|+|++|+++|+. +.+..|+.|+ +|.|+||||+++|+.|++.++++ ++|+++|+|||||+||++||
T Consensus 213 l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV~~dA 292 (518)
T cd07125 213 AVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGKNAMIVDSTA 292 (518)
T ss_pred HHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhhccCCCceEEEEcCCCCeEEECCCC
Confidence 99999999 9999999999954 4788999985 99999999999999999988855 78999999999999999999
Q ss_pred CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHH
Q 011107 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 239 Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
|+|.|++.+++++| +|+||.|++++|||||++++|+|+++|++++.++++|+|. +++++||++++++++++.++++++
T Consensus 293 Dl~~Aa~~iv~g~f-~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a 371 (518)
T cd07125 293 LPEQAVKDVVQSAF-GSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELM 371 (518)
T ss_pred CHHHHHHHHHHHHH-hcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999985 689999999999999999999998
Q ss_pred HhCCeEEeCCccCC-CCceeeceEecCCCCCCcccccccccceeeeEeeC--CHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 318 KVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 318 ~~~~~~~~gg~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
..++++++||..+. +|+|++|||+.++ +|++++||+||||++|++|+ |+||||+++|+++|||+++|||+|.+.+
T Consensus 372 ~~~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~ 449 (518)
T cd07125 372 RGEAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREI 449 (518)
T ss_pred HhCCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHH
Confidence 87789999987644 6899999999888 89999999999999999999 9999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCC-cchHHHHHHhhhccEEeEec
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~-~~g~~~~~~~t~~k~v~~~~ 452 (493)
+++++++++|+|+||++..+...+.+||||+|.||+|+ ++|.+++++||+.|+|+++.
T Consensus 450 ~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~k~i~~~~ 508 (518)
T cd07125 450 EYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEKTVSLNT 508 (518)
T ss_pred HHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcceEEEEEEc
Confidence 99999999999999997765555779999999999995 68899999999999998764
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-89 Score=710.82 Aligned_cols=438 Identities=26% Similarity=0.379 Sum_probs=405.3
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCc-hhhhHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE-LESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-~~a~~~ev~~~ 82 (493)
.++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||. .+++ .|+..+
T Consensus 6 t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~-~ev~~~ 84 (457)
T cd07108 6 TGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQAR-PEAAVL 84 (457)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHH-HHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999997 6775 699999
Q ss_pred HHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHH
Q 011107 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~ 162 (493)
++.+++++....++.. ...+. ..+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 85 ~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~ 160 (457)
T cd07108 85 ADLFRYFGGLAGELKG-ETLPF---GPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAV 160 (457)
T ss_pred HHHHHHHHHHHHHhCC-ceecc---CCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHH
Confidence 9999998876654332 22211 1233457889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 163 SLLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 163 ~~l~~~l~~alP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
..+.+++.+++|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|++.++++++|+++|+|||||+||++|||+
T Consensus 161 ~~l~~~~~~~lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~~~iV~~dAdl 240 (457)
T cd07108 161 LLLAEILAQVLPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVFPDADL 240 (457)
T ss_pred HHHHHHHHHhCCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEECCCCCH
Confidence 999999999999999999998 567788999985 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh-hcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHH
Q 011107 241 KVACRRMIMG-KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (493)
Q Consensus 241 ~~Aa~~i~~~-~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (493)
+.|++.++++ +| .|+||.|+++++||||++++|+|+++|+++++++++|+|. +++++||++++.+++++.++++++.
T Consensus 241 ~~Aa~~iv~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~ 319 (457)
T cd07108 241 DDAVDGAIAGMRF-TRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGL 319 (457)
T ss_pred HHHHHHHHHhhHh-hcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999 49 9999999999999999999999999999999999999985 6889999999999999999999985
Q ss_pred h--CCeEEeCCccC-----CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCH
Q 011107 319 V--SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 391 (493)
Q Consensus 319 ~--~~~~~~gg~~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~ 391 (493)
+ ++++++||..+ ..|+|++|||+++++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.
T Consensus 320 ~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~ 399 (457)
T cd07108 320 STSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDL 399 (457)
T ss_pred hCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEEcCCH
Confidence 4 77999999753 3589999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHH-HHHhhhccEEe
Q 011107 392 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFS-FDVFSHKKAVL 449 (493)
Q Consensus 392 ~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~-~~~~t~~k~v~ 449 (493)
+.++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.++ +++||+.|+|+
T Consensus 400 ~~a~~~~~~l~~g~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~ 456 (457)
T cd07108 400 GRALRAAHALEAGWVQVNQGGG--QQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN 456 (457)
T ss_pred HHHHHHHHhcCcceEEECCCCC--CCCCCCcCCcccCcCCCCccchhHHHHhhceEEEe
Confidence 9999999999999999999764 45779999999999999999977 69999999885
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-88 Score=709.68 Aligned_cols=437 Identities=22% Similarity=0.312 Sum_probs=400.2
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.+|++++++.++.+|+++++++|++|+ +.++..+|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 26 t~~~i~~~~~~~~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 101 (472)
T TIGR03250 26 NGTVVGTVPKASVDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEISDLITLESGLSKKDSL-YEVGRVA 101 (472)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999886 468999999999999999999999999999999999999986 5999999
Q ss_pred HHHHHHHHHHHhhcCCccccccc--ccCCCCceeeeecc-eEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSI--TTFPSSAEIVPEPF-GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~ 160 (493)
+.+++++..+....... ..... .......++.++|+ |||++|+|||||+.++++++++||++||+||+|||+.+|.
T Consensus 102 ~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~ 180 (472)
T TIGR03250 102 DVLTFAAAEALRDDGQI-FSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPL 180 (472)
T ss_pred HHHHHHHHHHHHhcCcc-cccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHHHHHHHHcCCEEEEECCCcchH
Confidence 99999998887654321 11100 11123457899998 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCC
Q 011107 161 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 161 ~~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~d 237 (493)
++..+.+++.++ +|+|++|+++| +.+.+..|++|+ ++.|.||||+.+|+.|++.++ .+|+++|+|||||+||++|
T Consensus 181 ~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~--~~~~~lElGGk~p~iV~~d 258 (472)
T TIGR03250 181 SALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAG--YRRQVLELGGNDPLIVMED 258 (472)
T ss_pred HHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhc--CCceEEecCCCCeEEECCC
Confidence 999999999999 99999999998 567889999985 999999999999999998775 6899999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
||++.|++.+++++| .|+||.|+++++||||++++|+|+++|++++++++.|+|. +++++||++++++++++++++++
T Consensus 259 Adl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~ 337 (472)
T TIGR03250 259 ADLDRAADLAVKGSY-KNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNE 337 (472)
T ss_pred CCHHHHHHHHHHHHH-HhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999988884 68899999999999999999999
Q ss_pred HHh-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 011107 317 DKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (493)
Q Consensus 317 a~~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 395 (493)
+.+ ++++++||.. .|+|++|||+++++++|++++||+||||++|++|+|++||++++|+++|||++||||+|.+++.
T Consensus 338 a~~~Ga~vl~gg~~--~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~~~ 415 (472)
T TIGR03250 338 AIAQGARLLLGNVR--DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYIT 415 (472)
T ss_pred HHHCCCEEEECCCc--CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHH
Confidence 865 6699999865 5899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCC-CcchHHHHHHhhhccEEeEe
Q 011107 396 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 396 ~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G-~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++++|+||||+.+.+ ..+.+||||+|.||+| +.+|.+++++||+.|+|.++
T Consensus 416 ~~~~~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~~~ 471 (472)
T TIGR03250 416 RFIAELQVGTVNVWEVPGY-RLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYSLP 471 (472)
T ss_pred HHHHHCCcceEEEcCCCCC-CCCCCCCCccccccCCCCCChHHHHHHhhceEEEEEe
Confidence 9999999999999986642 3456899999999999 56778999999999999764
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-88 Score=709.62 Aligned_cols=427 Identities=26% Similarity=0.382 Sum_probs=400.1
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+++++++++|++||..|+.+|.++|.++|++++++|++++++|++++++|+|||..+++..|+..++
T Consensus 46 t~~~i~~~~~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~ 125 (480)
T cd07111 46 TGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRARHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVA 125 (480)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999998756999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++....+... .....++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 126 ~~~~~~~~~~~~~~--------------~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~ 191 (480)
T cd07111 126 RHFYHHAGWAQLLD--------------TELAGWKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTAL 191 (480)
T ss_pred HHHHHHHHHHHHhc--------------CCcccceecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 98888765554321 1234589999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+++++.++ +|+|++|+|+|+.+.+..|++|+ +|.|+||||+.+|+.|.+.+++++||+++|+|||||+||++|||+|
T Consensus 192 ~l~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~p~iV~~daDl~ 271 (480)
T cd07111 192 LFAEICAEAGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGTGKKLSLELGGKSPFIVFDDADLD 271 (480)
T ss_pred HHHHHHHhcCCCcccEEEEeCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhccCCcEEEEcCCCceEEECCCCCHH
Confidence 999999999 99999999999667889999996 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|. +++++||++++.+++++.++++++..
T Consensus 272 ~aa~~i~~~~f-~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 350 (480)
T cd07111 272 SAVEGIVDAIW-FNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAE 350 (480)
T ss_pred HHHHHHHHHHH-hcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccccccCHHHHHHHHHHHHHHHHC
Confidence 99999999999 9999999999999999999999999999999999999985 68899999999999999999999865
Q ss_pred CCeEEeCCcc-CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 011107 320 SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (493)
Q Consensus 320 ~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 398 (493)
++++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.+++
T Consensus 351 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~ 430 (480)
T cd07111 351 GADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVA 430 (480)
T ss_pred CCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 6688888864 346899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccE
Q 011107 399 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 447 (493)
Q Consensus 399 ~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~ 447 (493)
+++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+
T Consensus 431 ~~l~aG~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~ 477 (480)
T cd07111 431 LSLKAGVVWINGHNL--FDAAAGFGGYRESGFGREGGKEGLYEYLRPSW 477 (480)
T ss_pred HhCCEeeEEECCCCC--CCCCCCcCCcccccCCccchHHHHHHHhhccC
Confidence 999999999998754 45678999999999999999999999999885
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-90 Score=719.98 Aligned_cols=438 Identities=32% Similarity=0.514 Sum_probs=407.9
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+|+++++++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+|||..+++. |+..++
T Consensus 16 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~ 94 (462)
T PF00171_consen 16 TGEVIGEVPSATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALETGKPIAEARG-EVDRAI 94 (462)
T ss_dssp TECEEEEEEEBSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSSHHHHHH-HHHHHH
T ss_pred CcCEEEEEcCCCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhcccccccccccccccccccccc-hhhhhh
Confidence 6789999999999999999999999999999999999999999999999999999999999999999999985 999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++.++.+.. +..+. ..+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.
T Consensus 95 ~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VVlkps~~~~~~~~ 170 (462)
T PF00171_consen 95 DFLRYYADAARKLAG-EVLPS---DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVVLKPSEQAPLTAL 170 (462)
T ss_dssp HHHHHHHHHHHHHTE-EEEEE---STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEEEEEBTTSHHHHH
T ss_pred hhhhhhhhcccceeh-hhccc---ccccccccccccccceeecccccccccccccchhhhhcccccceeeeccccccccc
Confidence 999999999988533 33222 24567789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+.+++.++ +|+|++|+++| +.+.+..|+.|+ ++.|.||||+++|+.|.+.++++++|+++|+|||||+||++|||+
T Consensus 171 ~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~daDl 250 (462)
T PF00171_consen 171 LLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLKPVVLELGGKNPVIVDPDADL 250 (462)
T ss_dssp HHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTSEEEEEECEEEEEEE-TTSHH
T ss_pred cchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcccccccccccccccceeeEeccccc
Confidence 999999998 99999999999 778899999995 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| +|+||.|+++++||||++++|+|+++|++++++++.|+|. +++++||+++.++++++.++++++..
T Consensus 251 d~aa~~iv~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 329 (462)
T PF00171_consen 251 DKAAEAIVRGAF-FNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKAQRERVKALIEDAVA 329 (462)
T ss_dssp HHHHHHHHHHHH-GGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHHHHHHHHHHHHHHHH
T ss_pred ccccccccchhc-ccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccchhhhhcccccccccc
Confidence 999999999999 9999999999999999999999999999999999999985 68999999999999999999999965
Q ss_pred -CCeEEeCC----ccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 320 -SGKIVHGG----ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 320 -~~~~~~gg----~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
++++++|| .....|+|++|||+.+++++|++++||+||||++|++|+|++||++++|+++|||+++|||+|.+.+
T Consensus 330 ~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~ 409 (462)
T PF00171_consen 330 EGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEYGLTASVFSRDESRA 409 (462)
T ss_dssp TTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSEESEEEEECSBHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccceecccccchhhhhcccccCCCceeEEeccccccc
Confidence 67999999 2345789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEE
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v 448 (493)
+++++++++|+|+||+++.+.... +||||+|.||+|+++|.+++++||+.|+|
T Consensus 410 ~~~~~~l~~g~v~iN~~~~~~~~~-~pfgG~~~SG~G~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 410 ERLARRLEAGRVWINDPPTGDPDG-LPFGGFKQSGIGREGGPEGLDEFTQIKTV 462 (462)
T ss_dssp HHHHHHSTSSEEEESSSSTGGTTS-SEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred ccccccccccceeecCCccccccc-CCCCCcccccCCcchHHHHHHHhCCccCC
Confidence 999999999999999987764444 89999999999999999999999999986
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-88 Score=707.01 Aligned_cols=441 Identities=21% Similarity=0.305 Sum_probs=407.6
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+++++++++|++|+..|+++|.++|.++|++++++|++++++|+++++.|+|||..+++ .|+..++
T Consensus 25 t~~~i~~~~~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~i 103 (477)
T TIGR01722 25 TNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIAELITAEHGKTHSDAL-GDVARGL 103 (477)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH-HHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999999996 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++........ ..... ...+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 104 ~~~~~~~~~~~~~~g-~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~ 180 (477)
T TIGR01722 104 EVVEHACGVNSLLKG-ETSTQ--VATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAV 180 (477)
T ss_pred HHHHHHHHHHHHhcC-ccccc--CCCCceEEEEEcccceEEEEccCChHHHHHHHHHHHHHhcCCEEEeeCcccChHHHH
Confidence 999998876665432 21111 112334577899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+.+++.++ +|+|++|+++|+.+.+..|++|+ ++.|+||||+++|+.|.+.++.++||+++|+|||||+||++|||+|
T Consensus 181 ~l~~~l~~aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~~~~~v~lElGG~n~~iV~~dADl~ 260 (477)
T TIGR01722 181 KLAELFSEAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKRVQALGGAKNHMVVMPDADKD 260 (477)
T ss_pred HHHHHHHHhCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCceEECCCCCHH
Confidence 999999999 99999999999777889999995 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| .|+||.|++++|||||+++ |+|+++|++++++++.|+|. +++++||++++++++++.++++++.+
T Consensus 261 ~a~~~i~~~~f-~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~ 338 (477)
T TIGR01722 261 AAADALVGAAY-GAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAE 338 (477)
T ss_pred HHHHHHHHHHH-HhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999 9999999999999999999 99999999999999999884 78899999999999999999999865
Q ss_pred CCeEEeCCccC-----CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 320 SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 320 ~~~~~~gg~~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
++++++||... ..|+|+.|||+.+++++|.+++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+
T Consensus 339 Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~ 418 (477)
T TIGR01722 339 GAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAA 418 (477)
T ss_pred CCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHH
Confidence 67999998752 2588999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCC--CcchHHHHHHhhhccEEeEe
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G--~~~g~~~~~~~t~~k~v~~~ 451 (493)
+++++++++|.|+||++... ..+.+||||+|.||+| +++|.+++++||+.|+|++.
T Consensus 419 ~~~~~~l~~g~v~iN~~~~~-~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~~ 476 (477)
T TIGR01722 419 RRFQHEIEVGQVGVNVPIPV-PLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTR 476 (477)
T ss_pred HHHHHhCCeeeEEECCCCCC-CCCCCCCCccccccCCCCccChHHHHHHhcCeeEEEEe
Confidence 99999999999999985532 4567899999999999 57899999999999999865
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-88 Score=707.30 Aligned_cols=440 Identities=22% Similarity=0.323 Sum_probs=404.0
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++|++.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..++
T Consensus 22 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 100 (484)
T TIGR03240 22 TQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALARVIARETGKPLWETR-TEVASMI 100 (484)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999999986 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++.....+...... ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.
T Consensus 101 ~~~~~~~~~~~~~~g~~~~----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~t~~ 176 (484)
T TIGR03240 101 GKVAISIKAYHERTGESEN----PMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAE 176 (484)
T ss_pred HHHHHHHHHHHHhcCcccc----CCCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccccHHHH
Confidence 9999988877665332111 112334678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhC-CCCeEEEeCCHHHHHHHHHHHhcc-ccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAKH-LTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~-~v~~v~ftGs~~~g~~i~~~a~~~-~~~~~~elgG~~p~iV~~daDl 240 (493)
.+++++.++ +|+|+||+|+|+.+.+..|++| ++|.|+||||+++|+.|++.++++ .+++++|+|||||+||++|||+
T Consensus 177 ~l~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~~~~~lElGGk~p~iV~~dADl 256 (484)
T TIGR03240 177 ETVKLWEKAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKILALEMGGNNPLIVDEVADI 256 (484)
T ss_pred HHHHHHHHhCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCCCcEEEECCCCCeEEECCCCCH
Confidence 999999999 9999999999977889999999 599999999999999999987765 6789999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcch-HHHHHHHHHHHHhhcCCCC--CCCCcccccCCHHHHHHHHHHHHHH
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYA-PKLLESLKNELENFYGKNP--LESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~g~~--~~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
+.|++.+++++| +|+||.|++++|||||++++ |+|+++|.+++++++.|+| ++++++||++++++++++.++++++
T Consensus 257 ~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~~gpli~~~~~~~v~~~i~~a 335 (484)
T TIGR03240 257 DAAVHLIIQSAF-ISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKL 335 (484)
T ss_pred HHHHHHHHHHHH-hcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCcccccCCHHHHHHHHHHHHHH
Confidence 999999999999 99999999999999999985 9999999999999999986 4678999999999999999999998
Q ss_pred Hh-CCeEEeCCcc-CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 011107 318 KV-SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (493)
Q Consensus 318 ~~-~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 395 (493)
.+ ++++++||.. +..++|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++
T Consensus 336 ~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~ 414 (484)
T TIGR03240 336 LALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYD 414 (484)
T ss_pred HHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 65 6788888764 345789999999 69999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 396 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 396 ~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++++|.|+||+...+ ..+.+||||+|.||+|+++|..+++ |++.|++.++.
T Consensus 415 ~~~~~l~aG~v~iN~~~~~-~~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~~ 469 (484)
T TIGR03240 415 RFLLEIRAGIVNWNKPLTG-ASSAAPFGGIGASGNHRPSAYYAAD-YCAYPVASLEA 469 (484)
T ss_pred HHHHhCCcceEEEECCCCC-CCCCCCcCCcccccCCCCCchHHHh-heeeeEEEEec
Confidence 9999999999999987654 4577999999999999999966666 99999998875
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-88 Score=704.88 Aligned_cols=439 Identities=26% Similarity=0.404 Sum_probs=406.9
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (493)
.++++++++.++.+++++++++|++|+. .|+.+|.++|.++|++++++|.+++++|++++++|+|||..+++ .|+..
T Consensus 6 tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ev~~ 84 (457)
T cd07114 6 TGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETR-AQVRY 84 (457)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH-HHHHH
Confidence 5789999999999999999999999997 49999999999999999999999999999999999999999986 59999
Q ss_pred HHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
+++.+++++...+.... .... ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+
T Consensus 85 ~~~~~~~~a~~~~~~~~-~~~~--~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~~ 161 (457)
T cd07114 85 LAEWYRYYAGLADKIEG-AVIP--VDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPAS 161 (457)
T ss_pred HHHHHHHHHHHHHHhcC-cccc--cCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchHH
Confidence 99999998876654422 1111 11123456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCC
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~da 238 (493)
+..++++|.++ +|+|+||+++| +.+.+..|+.|+ ++.|+||||+++|+.+.+.+++++||+++|+|||||+||++||
T Consensus 162 ~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dA 241 (457)
T cd07114 162 TLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIVFDDA 241 (457)
T ss_pred HHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCCCeeEECCCC
Confidence 99999999999 99999999999 556788899985 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHH
Q 011107 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 239 Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
|++.|++.|++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|. +++++||++++++++++.++++++
T Consensus 242 dl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a 320 (457)
T cd07114 242 DLDAAVNGVVAGIF-AAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARA 320 (457)
T ss_pred CHHHHHHHHHHHHH-hccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999985 689999999999999999999998
Q ss_pred Hh-CCeEEeCCccCC-----CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCH
Q 011107 318 KV-SGKIVHGGERDK-----NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 391 (493)
Q Consensus 318 ~~-~~~~~~gg~~~~-----~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~ 391 (493)
.. ++++++||.... .|+|++|||+++++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.
T Consensus 321 ~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~d~ 400 (457)
T cd07114 321 REEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDL 400 (457)
T ss_pred HHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECCCH
Confidence 65 669999997532 478999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 392 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 392 ~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
+.++++++++++|+|+||+... ..+.+||||+|.||+|+++|.+++++||+.|++.
T Consensus 401 ~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~ 456 (457)
T cd07114 401 ARAHRVARAIEAGTVWVNTYRA--LSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVW 456 (457)
T ss_pred HHHHHHHHhcCcceEEECCCCC--CCCCCCCCCCccCcCCccchHHHHHHHhceeEEe
Confidence 9999999999999999998654 4578999999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-88 Score=695.68 Aligned_cols=420 Identities=23% Similarity=0.348 Sum_probs=388.7
Q ss_pred HHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhc
Q 011107 18 AASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWM 97 (493)
Q Consensus 18 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~ 97 (493)
|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|+++++.|+|||..++. .|+..+++.+++++..+.++.
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~ 79 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQ-TEVAAMAGKIDISIKAYHERT 79 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 4789999999999999999999999999999999999999999999999999999996 599999999999998888775
Q ss_pred CCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhh-cCCC
Q 011107 98 TPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176 (493)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~a-lP~g 176 (493)
...... ..+...+++++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++..+.+++.++ +|+|
T Consensus 80 ~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g 155 (431)
T cd07095 80 GERATP----MAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPG 155 (431)
T ss_pred CCcccC----CCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChh
Confidence 433221 12446788999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred cEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhcc-ccchhhhcCCCCeEEEcCCCCHHHHHHHHHHhhccc
Q 011107 177 SIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH-LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC 254 (493)
Q Consensus 177 ~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~-~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~~~~~~ 254 (493)
++|+++|+.+.+..|++|+ +|.|.||||+++|+.|++.++.+ .+++++|+|||||+||++|||+|.|++.+++++| +
T Consensus 156 ~~~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~-~ 234 (431)
T cd07095 156 VLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAF-L 234 (431)
T ss_pred HheEEeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-H
Confidence 9999999777889999996 99999999999999999987654 6999999999999999999999999999999999 9
Q ss_pred CCCCcccCCCEEEEcCc-chHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-CCeEEeCCcc-C
Q 011107 255 NNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGER-D 330 (493)
Q Consensus 255 ~~Gq~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~~~~gg~~-~ 330 (493)
|+||.|+++++||||++ ++|+|+++|++++++++.|+|. +++++||++++.+++++.++++++.. ++++++||.. +
T Consensus 235 ~~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~ 314 (431)
T cd07095 235 TAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLV 314 (431)
T ss_pred hCCCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCC
Confidence 99999999999999999 9999999999999999999985 56899999999999999999999865 6799999865 3
Q ss_pred CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcccceEEEcC
Q 011107 331 KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 410 (493)
Q Consensus 331 ~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~ 410 (493)
.+|+|++|||+ +++++|++++||+||||++|++|+|++||++++|+++|||+++|||+|.++++++++++++|+|+||+
T Consensus 315 ~~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~ 393 (431)
T cd07095 315 AGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNR 393 (431)
T ss_pred CCCeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECC
Confidence 46899999999 69999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhc
Q 011107 411 TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 445 (493)
Q Consensus 411 ~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~ 445 (493)
+... ..+.+||||+|.||+|+++|.++++.|+.+
T Consensus 394 ~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~ 427 (431)
T cd07095 394 PTTG-ASSTAPFGGVGLSGNHRPSAYYAADYCAYP 427 (431)
T ss_pred CCCC-CCCCCCCCCcccccCCCCChHHHHHHHhhh
Confidence 6553 456799999999999999999999955443
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-87 Score=694.23 Aligned_cols=424 Identities=52% Similarity=0.887 Sum_probs=393.7
Q ss_pred HHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhcCCc
Q 011107 21 LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100 (493)
Q Consensus 21 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 100 (493)
+++++|++||..|+.+|..+|.++|++++++|++++++|++++++|+|||..++...|+..+++.++++++.+..+....
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~ 81 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPR 81 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 48899999999999999999999999999999999999999999999999887765699999999999998887665433
Q ss_pred ccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhhcCCCcEEE
Q 011107 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRV 180 (493)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~alP~g~v~v 180 (493)
.........+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+++++.+++|+|++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~~~P~gv~~v 161 (426)
T cd07087 82 RVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPKYFDPEAVAV 161 (426)
T ss_pred ccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCCCEEEE
Confidence 22211111234568899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCChHhHHHHHhCCCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHHHHhhcccCCCCcc
Q 011107 181 VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 260 (493)
Q Consensus 181 v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~~~~~~~~Gq~C 260 (493)
++|+.+.+..|+.|+++.|+||||+++|+.|.+.+++++||+++|+|||||+||++|||+|.|++.+++++| .|+||.|
T Consensus 162 v~g~~~~~~~l~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~-~~~GQ~C 240 (426)
T cd07087 162 VEGGVEVATALLAEPFDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKF-LNAGQTC 240 (426)
T ss_pred EeCCchHHHHHHhCCCCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHH-hccCCcc
Confidence 999777889999989999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred cCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCeEEeCCccCCCCceeeceE
Q 011107 261 ISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTL 340 (493)
Q Consensus 261 ~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv 340 (493)
+++++||||++++|+|+++|.++++++.+++|++.+++||++++.+++++.++++++ ++++||..+.+|+|++|||
T Consensus 241 ~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~~~~~~~gpli~~~~~~~~~~~i~~a----~v~~gg~~~~~g~~~~Ptv 316 (426)
T cd07087 241 IAPDYVLVHESIKDELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDDG----KVVIGGQVDKEERYIAPTI 316 (426)
T ss_pred ccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCCccCCCcCCCCCHHHHHHHHHHHhcc----eEEeCCccCCCCCEEeeEE
Confidence 999999999999999999999999999988888889999999999999999999864 8999997655689999999
Q ss_pred ecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcccceEEEcCCCcccCCCCC
Q 011107 341 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 420 (493)
Q Consensus 341 l~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~ 420 (493)
+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++++++|+|+||+++.+...+.+
T Consensus 317 l~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~ 396 (426)
T cd07087 317 LDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNL 396 (426)
T ss_pred EecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987654455789
Q ss_pred CccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 421 PFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 421 p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
||||+|.||+|+++|.+++++||+.|+|+
T Consensus 397 PfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 397 PFGGVGNSGMGAYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred CCCCCCcccCCCccCHHHHHHhccceeec
Confidence 99999999999999999999999999874
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-87 Score=701.13 Aligned_cols=439 Identities=26% Similarity=0.410 Sum_probs=409.2
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+++++++++|++|+..|+.+|.++|.++|++++++|++++++|++++++|+|||..+++..|+..++
T Consensus 6 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~i 85 (455)
T cd07093 6 TGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRDIPRAA 85 (455)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999888667999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++...... ...... ..+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 86 ~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~~~ 161 (455)
T cd07093 86 ANFRFFADYILQLD-GESYPQ---DGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAW 161 (455)
T ss_pred HHHHHHHHhHHHhC-CccccC---CCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHHHH
Confidence 99999988876632 221111 12445678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+.+++.++ +|+|+||+++| +.+.+..|++|+ ++.|+||||+.+|+.|.+.+++++||+++|+|||||+||++|||+
T Consensus 162 ~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dAdl 241 (455)
T cd07093 162 LLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVFADADL 241 (455)
T ss_pred HHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCceEECCCCCH
Confidence 999999999 99999999998 567889999985 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
+.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|. +++++||++++.+++++.++++++..
T Consensus 242 ~~a~~~i~~~~~-~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~ 320 (455)
T cd07093 242 DRAVDAAVRSSF-SNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARA 320 (455)
T ss_pred HHHHHHHHHHHH-hccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999885 67899999999999999999998864
Q ss_pred -CCeEEeCCccCC-----CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 320 -SGKIVHGGERDK-----NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 320 -~~~~~~gg~~~~-----~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
++++++||.... .|+|+.|||+++++++|++++||+||||++|++|+|.+|||+++|+++|||+++|||+|.+.
T Consensus 321 ~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~~~ 400 (455)
T cd07093 321 EGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGR 400 (455)
T ss_pred CCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence 679999997542 48899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
++++++++++|+|+||++..+ .+.+||||+|.||+|+++|++|+++|++.|++.
T Consensus 401 ~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07093 401 AHRVARRLEAGTVWVNCWLVR--DLRTPFGGVKASGIGREGGDYSLEFYTELKNVC 454 (455)
T ss_pred HHHHHHhCCcceEEECCCCCC--CCCCCcCCCccCcCCCCchHHHHHHHhceeEEe
Confidence 999999999999999997754 467999999999999999999999999999885
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-87 Score=703.68 Aligned_cols=439 Identities=18% Similarity=0.245 Sum_probs=392.8
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHH-hhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGT-FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
.++++++++..+ +|+++|+++|++| |+.|+.+|.++|.++|++++++|++++++|+++ +.|+|||+.+++ .|+..+
T Consensus 24 tg~~~~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~la~l-~~e~Gkp~~ea~-~Ev~~~ 100 (513)
T cd07128 24 TGEVVARVSSEG-LDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDLYAL-SAATGATRRDSW-IDIDGG 100 (513)
T ss_pred CCCEEEEEcCCH-HHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHH-HHHHHH
Confidence 578999999865 8999999999998 799999999999999999999999999999996 999999999997 599999
Q ss_pred HHHHHHHHHHHHhhcCCcccc-----cccccCC-CCceeeeec-ceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCC
Q 011107 83 KTSIKSALKELKHWMTPEKAK-----TSITTFP-SSAEIVPEP-FGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPS 155 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~P-~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps 155 (493)
++.+++++...+++....... .+..... ...+++++| +|||++|+|||||++++++++++||++||+||+|||
T Consensus 101 ~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKPs 180 (513)
T cd07128 101 IGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPA 180 (513)
T ss_pred HHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCEEEEECC
Confidence 999999999887765321110 0000001 134678999 599999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHhhh--cCCCcEEEEeCChHhHHHHHhC--CCCeEEEeCCHHHHHHHHHHH--hccccchhhhcCCC
Q 011107 156 EVAPASSSLLAKLVGEY--MDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAA--AKHLTPVLLELGGK 229 (493)
Q Consensus 156 ~~~~~~~~~l~~~l~~a--lP~g~v~vv~g~~~~~~~L~~~--~v~~v~ftGs~~~g~~i~~~a--~~~~~~~~~elgG~ 229 (493)
+.+|+++..+.+++.++ +|+|++|+++|+.. .+.++ .+|+|.||||+++|+.|++.+ +++++|+++|+|||
T Consensus 181 ~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~---~~~~~l~~~d~v~fTGS~~~G~~i~~~a~~a~~~~~~~lElGGk 257 (513)
T cd07128 181 TATAYLTEAVVKDIVESGLLPEGALQLICGSVG---DLLDHLGEQDVVAFTGSAATAAKLRAHPNIVARSIRFNAEADSL 257 (513)
T ss_pred CCCCHHHHHHHHHHHHhCCCCCCcEEEecCChH---HHhcccCCCCEEEEECCHHHHHHHHHHhhhhccCceEEEeccCc
Confidence 99999999999999997 79999999998532 23333 489999999999999999985 47899999999999
Q ss_pred CeEEEcCCCC-----HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCC
Q 011107 230 SPVVFDSGIN-----LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVN 303 (493)
Q Consensus 230 ~p~iV~~daD-----l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~ 303 (493)
||+||++||| +|.|++.+++++| .|+||.|++++|+|||+++||+|+++|++++++++.|+| ++++++||+++
T Consensus 258 np~IV~~DAd~~~~dld~aa~~iv~~~f-~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~lGpli~ 336 (513)
T cd07128 258 NAAILGPDATPGTPEFDLFVKEVAREMT-VKAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVS 336 (513)
T ss_pred CcEEECCCCCcchhhHHHHHHHHHHHHH-HhcCCcccCCceEEEehHHHHHHHHHHHHHHHhcccCCCccCCCCcCCCCC
Confidence 9999999999 9999999999999 999999999999999999999999999999999999998 47889999999
Q ss_pred HHHHHHHHHHHHHHHhCCeEEeCCccC--------CCCceeeceEecCCCCC--CcccccccccceeeeEeeCCHHHHHH
Q 011107 304 SNHFARLSKLLDDDKVSGKIVHGGERD--------KNKLRIAPTLLLDVPRD--SLIMSEEIFGPLLPILTVDKIEDSFD 373 (493)
Q Consensus 304 ~~~~~~~~~~i~~a~~~~~~~~gg~~~--------~~g~~~~Ptvl~~v~~~--~~i~~eE~fgPvl~v~~~~~~~eai~ 373 (493)
+.+++++.++|+++.+++++++||... ..|+|++|||+.+++++ |++++||+||||++|++|+|++|+++
T Consensus 337 ~~~~~~i~~~i~~a~~~A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eE~FGPVl~V~~~~~~deai~ 416 (513)
T cd07128 337 REQREDVRAAVATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIE 416 (513)
T ss_pred HHHHHHHHHHHHHHHhCCEEEECCCccccccCCCCCCCEEECCEEEeccCCcccchHHhCCCcCCeEEEEeeCCHHHHHH
Confidence 999999999999997669999999642 25899999999998874 89999999999999999999999999
Q ss_pred HHhcCCCCcEEEEecCCHHHHHHHHhhcc--cceEEEcCCCc-------ccCCCCCCccCCCCCCCCCcc-hHHHHHHhh
Q 011107 374 IINSGTKPLAAYLFTNNKKLKQQFVETVS--AGGLVINDTAV-------HLAVHSLPFGGVQESGMGAYH-GKFSFDVFS 443 (493)
Q Consensus 374 ~~n~~~~gl~a~v~t~d~~~~~~~~~~l~--~g~v~iN~~~~-------~~~~~~~p~gG~~~SG~G~~~-g~~~~~~~t 443 (493)
++|+++|||++||||+|.+++.+++++++ +|+||||+... ....+.+||||+|.||+|++. |.+++++|+
T Consensus 417 ~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~gg~~~l~~~~ 496 (513)
T cd07128 417 LAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYM 496 (513)
T ss_pred HHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCCCCCCCcccCCCCcccccHHHHHHhh
Confidence 99999999999999999999999999997 99999998642 123467899999999999994 799999999
Q ss_pred hccEEe
Q 011107 444 HKKAVL 449 (493)
Q Consensus 444 ~~k~v~ 449 (493)
+.|+|.
T Consensus 497 ~~k~v~ 502 (513)
T cd07128 497 QRTAVQ 502 (513)
T ss_pred eeeeee
Confidence 999874
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-87 Score=694.24 Aligned_cols=422 Identities=30% Similarity=0.489 Sum_probs=391.2
Q ss_pred HHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhc
Q 011107 18 AASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWM 97 (493)
Q Consensus 18 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~ 97 (493)
|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..++. .|+..+++.++++++....+.
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~-~ei~~~~~~l~~~~~~~~~~~ 79 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAG-FNVDLAAGMLREAASLITQII 79 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999999999999999999999999999987775 599999999999998887652
Q ss_pred CCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhh-cCCC
Q 011107 98 TPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176 (493)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~a-lP~g 176 (493)
. ...+. ...+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+.+++.++ +|+|
T Consensus 80 ~-~~~~~--~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~g 156 (432)
T cd07105 80 G-GSIPS--DKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKG 156 (432)
T ss_pred C-eeccc--CCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCC
Confidence 2 11111 112345678999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred cEEEEeCC----hHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHHHHhh
Q 011107 177 SIRVVEGA----VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK 251 (493)
Q Consensus 177 ~v~vv~g~----~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~~~ 251 (493)
++|+++|+ .+.+..|++|+ ++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||+|.|++.+++++
T Consensus 157 v~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~ 236 (432)
T cd07105 157 VLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGA 236 (432)
T ss_pred cEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHH
Confidence 99999974 24678999996 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHh-CCeEEeCCccC
Q 011107 252 WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERD 330 (493)
Q Consensus 252 ~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~~~~gg~~~ 330 (493)
| +|+||.|+++++||||+++||+|+++|+++++++++| ++++||++++.+++++.++++++.. ++++++||..+
T Consensus 237 ~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~ 311 (432)
T cd07105 237 F-LNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLAD 311 (432)
T ss_pred H-hcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC
Confidence 9 9999999999999999999999999999999999877 6899999999999999999999865 66999998764
Q ss_pred --CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcccceEEE
Q 011107 331 --KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVI 408 (493)
Q Consensus 331 --~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~i 408 (493)
..|+|++|||+++++++|++++||+||||++|++|+|.|||++++|+++|||+++|||+|.+.++++++++++|+|+|
T Consensus 312 ~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~v 391 (432)
T cd07105 312 ESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHI 391 (432)
T ss_pred CCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEE
Confidence 358999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 409 NDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 409 N~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
|+++.+ ..+.+||||+|.||+|+++|++++++||+.|+|.
T Consensus 392 N~~~~~-~~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~ 431 (432)
T cd07105 392 NGMTVH-DEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWIT 431 (432)
T ss_pred CCCCCC-CCCCCCCCCcccccccccChHHHHHHhhceEEEe
Confidence 987654 4578999999999999999999999999999985
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-87 Score=695.09 Aligned_cols=435 Identities=24% Similarity=0.361 Sum_probs=399.3
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.+|++++++.++.+++++++++|+++ |+.+|.++|.++|++++++|++++++|++++++|+|||..++. .|+..++
T Consensus 8 tg~~i~~~~~~~~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 83 (451)
T cd07146 8 TGEVVGTVPAGTEEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTR-YEVGRAA 83 (451)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 57899999999999999999999875 8889999999999999999999999999999999999999996 5999999
Q ss_pred HHHHHHHHHHHhhcCCccccccc--ccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSI--TTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
+.+++++.....+.. +...... ...+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|++
T Consensus 84 ~~l~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~ 162 (451)
T cd07146 84 DVLRFAAAEALRDDG-ESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLS 162 (451)
T ss_pred HHHHHHHHHHHHhcC-cccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCCchHH
Confidence 999999988776533 2111110 0123345788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCC
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~da 238 (493)
+..+.+++.++ +|+|++|+++| +.+.+..|++|+ ++.|+||||+.+|+.|.+.++ .+|+++|+|||||+||++||
T Consensus 163 ~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~--~~~~~lElGG~~p~iV~~da 240 (451)
T cd07146 163 AIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YKRQLLELGGNDPLIVMDDA 240 (451)
T ss_pred HHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc--CCceeeecCCCceEEECCCC
Confidence 99999999998 99999999998 467789999995 999999999999999988775 68999999999999999999
Q ss_pred CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHH
Q 011107 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 239 Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
|++.|++.+++++| +|+||.|+++++||||++++|+|+++|++++++++.|+|. +++++||++++.++++++++++++
T Consensus 241 Dl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a 319 (451)
T cd07146 241 DLERAATLAVAGSY-ANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEA 319 (451)
T ss_pred CHHHHHHHHHHHHH-hhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999885 688999999999999999999998
Q ss_pred Hh-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHH
Q 011107 318 KV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396 (493)
Q Consensus 318 ~~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 396 (493)
.. ++++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++
T Consensus 320 ~~~Ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~ 397 (451)
T cd07146 320 IAQGARVLLGNQR--QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKR 397 (451)
T ss_pred HhCCCEEEeCCCc--CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence 65 6799999864 58899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccceEEEcCCCcccCCCCCCccCCCCCCC-CCcchHHHHHHhhhccEEe
Q 011107 397 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGM-GAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 397 ~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~-G~~~g~~~~~~~t~~k~v~ 449 (493)
+++++++|+|+||+.+. ...+.+||||+|.||+ |+++|++|+++||+.|+|.
T Consensus 398 ~~~~l~~G~v~iN~~~~-~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 398 LVERLDVGTVNVNEVPG-FRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450 (451)
T ss_pred HHHHCCcceEEECCCCC-CCCCCCCcCcccccCCCcccChHHHHHHHhceeEEe
Confidence 99999999999998653 3456799999999995 8999999999999999875
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-87 Score=697.46 Aligned_cols=439 Identities=28% Similarity=0.422 Sum_probs=408.8
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++..+.+++++++++|++|++.|+.+|.++|.++|+++++.|+++.++|+++++.|+|||..+++ .|+..++
T Consensus 6 tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~ 84 (451)
T cd07103 6 TGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEAR-GEVDYAA 84 (451)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++....+...... .+ ....+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 85 ~~l~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~ 161 (451)
T cd07103 85 SFLEWFAEEARRIYGRT-IP--SPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSAL 161 (451)
T ss_pred HHHHHHHHHHHHhcCcc-cc--cCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHHH
Confidence 99999888776654321 11 1112445678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhC-CCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~-~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+.+++.++ +|+|++|++++ +.+.++.|+.| ++|.|+||||+.+|+.+.+.+++++||+++|+|||||+||++|||+
T Consensus 162 ~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl 241 (451)
T cd07103 162 ALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVFDDADL 241 (451)
T ss_pred HHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCH
Confidence 999999998 99999999999 45678889988 5999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
+.|++.+++++| .|+||.|+++++||||++++|+|+++|++++++++.|+| ++++++||++++.+++++.++++++..
T Consensus 242 ~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~ 320 (451)
T cd07103 242 DKAVDGAIASKF-RNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVA 320 (451)
T ss_pred HHHHHHHHHHHH-HhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 999999999999999999999999999999999998888 478899999999999999999999865
Q ss_pred -CCeEEeCCccCC-CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 320 -SGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 320 -~~~~~~gg~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
++++++||.... +|+|++|||+.+++++++++++|+||||++|++|+|++||++++|+++|||+++|||+|.+.++++
T Consensus 321 ~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 400 (451)
T cd07103 321 KGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRV 400 (451)
T ss_pred CCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 679999987643 688999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
++++++|.|+||++.. ..+.+||||+|.||+|+++|++++++||+.|+|.
T Consensus 401 ~~~l~~g~v~vN~~~~--~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 401 AEALEAGMVGINTGLI--SDAEAPFGGVKESGLGREGGKEGLEEYLETKYVS 450 (451)
T ss_pred HHhCCcceEEECCCCC--CCCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence 9999999999999864 4577999999999999999999999999999874
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-87 Score=698.81 Aligned_cols=441 Identities=16% Similarity=0.212 Sum_probs=390.5
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHh-hhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTF-ASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~-~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
.++++++++. +.+|+++|+++|++|+ +.|+++|..+|.++|++++++|++++++|++++++|+|||+.+++ .|+..+
T Consensus 28 tge~l~~v~~-~~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~a~-~ev~~~ 105 (521)
T PRK11903 28 TGEELVRVSA-TGLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDAYYDIATANSGTTRNDSA-VDIDGG 105 (521)
T ss_pred CCCEEEEecC-ChHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 4789999997 8899999999999995 999999999999999999999999999999999999999999997 599999
Q ss_pred HHHHHHHHHHHHhhcCCcccccc--cc--c-CCCCceeeeec-ceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCC
Q 011107 83 KTSIKSALKELKHWMTPEKAKTS--IT--T-FPSSAEIVPEP-FGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSE 156 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~--~~--~-~~~~~~~~~~P-~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~ 156 (493)
++.+++++...+.+......... .. . .....++.++| +|||++|+|||||+.++++++++||++||+||+|||+
T Consensus 106 i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VV~KPs~ 185 (521)
T PRK11903 106 IFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGVPVIVKPAT 185 (521)
T ss_pred HHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHHHHHHHHHHHHHHcCCeEEEEcCC
Confidence 99999999887665322111100 00 0 11224667899 6999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHhhh--cCCCcEEEEeCCh-HhHHHHHhCCCCeEEEeCCHHHHHHHHHHH--hccccchhhhcCCCCe
Q 011107 157 VAPASSSLLAKLVGEY--MDLSSIRVVEGAV-AETSALLDQKWDKICYTGNSRVARIVMAAA--AKHLTPVLLELGGKSP 231 (493)
Q Consensus 157 ~~~~~~~~l~~~l~~a--lP~g~v~vv~g~~-~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a--~~~~~~~~~elgG~~p 231 (493)
.+|.++..+.+++.++ +|+|++|+++|+. +.+..| .++|.|+||||+++|+.|++.+ +.+++|+++|+|||||
T Consensus 186 ~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l--~~v~~v~fTGS~~~G~~v~~~aa~~~~~~~~~lElGGknp 263 (521)
T PRK11903 186 ATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL--QPFDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNS 263 (521)
T ss_pred cChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc--cCCCEEEEECCHHHHHHHHhhhhhhccCceeEeeccccCc
Confidence 9999999999999987 7999999999843 433333 3599999999999999999865 4789999999999999
Q ss_pred EEEcCCCC-----HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHH
Q 011107 232 VVFDSGIN-----LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSN 305 (493)
Q Consensus 232 ~iV~~daD-----l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~ 305 (493)
+||++||| ++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|. +++++||++++.
T Consensus 264 ~IV~~dAd~~~~~~~~aa~~i~~~~f-~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~ 342 (521)
T PRK11903 264 ALLGPDAAPGSEAFDLFVKEVVREMT-VKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRA 342 (521)
T ss_pred eEEccCCcccchhHHHHHHHHHHHHH-hccCCCccCCeEEEEehhHHHHHHHHHHHHHHhccCCCCCCCcCccCCCCCHH
Confidence 99999999 5999999999999 9999999999999999999999999999999999999985 688999999999
Q ss_pred HHHHHHHHHHHHHhCCeEEeCCccC-------CCCceeeceEecCCCC--CCcccccccccceeeeEeeCCHHHHHHHHh
Q 011107 306 HFARLSKLLDDDKVSGKIVHGGERD-------KNKLRIAPTLLLDVPR--DSLIMSEEIFGPLLPILTVDKIEDSFDIIN 376 (493)
Q Consensus 306 ~~~~~~~~i~~a~~~~~~~~gg~~~-------~~g~~~~Ptvl~~v~~--~~~i~~eE~fgPvl~v~~~~~~~eai~~~n 376 (493)
+++++.++|+...+++++++||... ..|+|++|||+.++++ +|++++||+||||++|++|+|++|||+++|
T Consensus 343 ~~~~v~~~i~~~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~~eE~FGPvl~V~~~~~~~eai~~~N 422 (521)
T PRK11903 343 QLAAVRAGLAALRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHDVEVFGPVATLLPYRDAAHALALAR 422 (521)
T ss_pred HHHHHHHHHHHHhcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHHhCcccCCeEEEEeeCCHHHHHHHHh
Confidence 9999999999776788999999641 2478999999987654 478899999999999999999999999999
Q ss_pred cCCCCcEEEEecCCHHHHHHHHhhc--ccceEEEcCCCc-------ccCCCCCCccCCCCCCCCCcc-hHHHHHHhhhcc
Q 011107 377 SGTKPLAAYLFTNNKKLKQQFVETV--SAGGLVINDTAV-------HLAVHSLPFGGVQESGMGAYH-GKFSFDVFSHKK 446 (493)
Q Consensus 377 ~~~~gl~a~v~t~d~~~~~~~~~~l--~~g~v~iN~~~~-------~~~~~~~p~gG~~~SG~G~~~-g~~~~~~~t~~k 446 (493)
+++|||++||||+|.+.+.++++++ ++|+|+||+.+. ....+.+||||+|.||+|+++ |.+++++||+.|
T Consensus 423 ~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~~l~~~t~~~ 502 (521)
T PRK11903 423 RGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLHGGPGRAGGGEELGGLRALAFYHRRS 502 (521)
T ss_pred cCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCCCCCCCcCcCCcccccHHHHHHHhccc
Confidence 9999999999999999999999999 999999997542 123457899999999999995 589999999988
Q ss_pred EEe
Q 011107 447 AVL 449 (493)
Q Consensus 447 ~v~ 449 (493)
+|.
T Consensus 503 ~~~ 505 (521)
T PRK11903 503 AVQ 505 (521)
T ss_pred eee
Confidence 764
|
|
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-86 Score=714.55 Aligned_cols=441 Identities=18% Similarity=0.223 Sum_probs=393.3
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHH-hhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGT-FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
.++++++++..+ +|+++|+++|++| |+.|+++|..+|.++|++++++|++++++|++ +++|+|||+.+++ .|+..+
T Consensus 24 tg~~i~~~~~~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-~~~e~GK~~~~a~-~ev~~~ 100 (663)
T TIGR02278 24 TGEVLARVTSEG-LDVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEALYA-LAATTGATRRDNW-VDIDGG 100 (663)
T ss_pred CCCEEEEEcCCc-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHH-HHHHHH
Confidence 578999999999 6999999999996 99999999999999999999999999999999 5999999999997 599999
Q ss_pred HHHHHHHHHHHHhhcCCccc----c-cccccC-CCCceeeeecc-eEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCC
Q 011107 83 KTSIKSALKELKHWMTPEKA----K-TSITTF-PSSAEIVPEPF-GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPS 155 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~----~-~~~~~~-~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps 155 (493)
++.+++++...+++...... . .+.... ....++.++|+ |||++|+|||||+.++++++++||++||+||+|||
T Consensus 101 ~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~Vv~KPs 180 (663)
T TIGR02278 101 IGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPA 180 (663)
T ss_pred HHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 99999999988764321100 0 000001 12457899997 99999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHhhh--cCCCcEEEEeCChHhHHHHHhC-C-CCeEEEeCCHHHHHHHHHHH--hccccchhhhcCCC
Q 011107 156 EVAPASSSLLAKLVGEY--MDLSSIRVVEGAVAETSALLDQ-K-WDKICYTGNSRVARIVMAAA--AKHLTPVLLELGGK 229 (493)
Q Consensus 156 ~~~~~~~~~l~~~l~~a--lP~g~v~vv~g~~~~~~~L~~~-~-v~~v~ftGs~~~g~~i~~~a--~~~~~~~~~elgG~ 229 (493)
+.+|+++..+.+++.++ +|+|+||+++|+. +. +..+ + ++.|+||||+++|+.|++.+ +++++|+++|+|||
T Consensus 181 ~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~--~~-~~~~~~~~~~V~FTGS~~~G~~i~~~aaaa~~~~~~~lELGGk 257 (663)
T TIGR02278 181 TPTAYVAEALVRTMVESGLLPEGSLQLICGSA--GD-LLDHLDHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADSL 257 (663)
T ss_pred CcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh--HH-HHhcCCCCCEEEEECCHHHHHHHHHhHhHHhcCceEEEEcCCC
Confidence 99999999999999997 7999999999852 22 3333 3 89999999999999999874 47899999999999
Q ss_pred CeEEEcCCCC-----HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCC
Q 011107 230 SPVVFDSGIN-----LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVN 303 (493)
Q Consensus 230 ~p~iV~~daD-----l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~ 303 (493)
||+||++||| +|.|++.+++++| .|+||.|++++|||||++++|+|+++|.++++++++|+|. +++++||+++
T Consensus 258 ~p~IV~~dAd~~~~dl~~aa~~i~~~~f-~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~t~~Gpli~ 336 (663)
T TIGR02278 258 NAAILGEDATPDEPEFDLFAQEIVRELT-IKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVS 336 (663)
T ss_pred CeEEEcCCCCccchhHHHHHHHHHHHHH-hcCCCCccCCceEEEeHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCCC
Confidence 9999999999 9999999999999 9999999999999999999999999999999999999995 6889999999
Q ss_pred HHHHHHHHHHHHHHHh-CCeEEeCCccCCCCceeeceEecCCCCCC-cccccccccceeeeEeeCCHHHHHHHHhcCCCC
Q 011107 304 SNHFARLSKLLDDDKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDS-LIMSEEIFGPLLPILTVDKIEDSFDIINSGTKP 381 (493)
Q Consensus 304 ~~~~~~~~~~i~~a~~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~-~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~g 381 (493)
+.++++++++|+++.+ ++++++||..+.+|+|++|||+.+++++| ++++||+||||++|++|+|.+|||+++|+++||
T Consensus 337 ~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~g~~~~PTvl~~~~~~~~~i~~eE~FGPVl~V~~~~~~~eai~~aN~~~~g 416 (663)
T TIGR02278 337 LEQRADVEAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGS 416 (663)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEECCCcCCCCeeEccEEEeeCCcchhhHHhccccCCeEEEEeeCCHHHHHHHHHcCCCC
Confidence 9999999999999866 67999999765568999999999999886 799999999999999999999999999999999
Q ss_pred cEEEEecCCHHHHHHHHhhc--ccceEEE-cCCC-----cc-cCCCCCCccCCCCCCCCCc-chHHHHHHhhhccEEeEe
Q 011107 382 LAAYLFTNNKKLKQQFVETV--SAGGLVI-NDTA-----VH-LAVHSLPFGGVQESGMGAY-HGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 382 l~a~v~t~d~~~~~~~~~~l--~~g~v~i-N~~~-----~~-~~~~~~p~gG~~~SG~G~~-~g~~~~~~~t~~k~v~~~ 451 (493)
|++||||+|.+.+.++++++ ++|.||| |.+. .+ ...+.+||||+|.||+|++ +|.+++++|++.|+|..-
T Consensus 417 L~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~g~~~~l~~f~~~k~v~~~ 496 (663)
T TIGR02278 417 LVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGGGEELGGLRSVKHYMQRTAIQGS 496 (663)
T ss_pred ceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCccCcCCCccchHHHHHHhceeEEEEcC
Confidence 99999999999999999999 8999999 6421 11 1236789999999999999 468999999999998653
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-86 Score=693.93 Aligned_cols=439 Identities=27% Similarity=0.423 Sum_probs=403.3
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++..+.+++++++++|++|+..|+.+|.++|.++|++++++|+++.++|++++++|+|||..++. .|+..++
T Consensus 8 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~ 86 (453)
T cd07149 8 DGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDAR-KEVDRAI 86 (453)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHH-HHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999999996 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccc-cCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSIT-TFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~ 162 (493)
+.++++++.++.+........... ..+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++
T Consensus 87 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~~~p~~~ 166 (453)
T cd07149 87 ETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSA 166 (453)
T ss_pred HHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCCcchHHH
Confidence 999999888766543211100000 1122357789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCC
Q 011107 163 SLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (493)
Q Consensus 163 ~~l~~~l~~a-lP~g~v~vv~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daD 239 (493)
..+.+++.++ +|+|++|+++|+ .+.+..|++|+ +|.|+||||+++|+.|++.++ ++|+++|+|||||+||++|||
T Consensus 167 ~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelGGk~p~iV~~dad 244 (453)
T cd07149 167 LKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSNAAVIVDADAD 244 (453)
T ss_pred HHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC--CCceeeecCCCceEEECCCCC
Confidence 9999999998 999999999994 45589999985 999999999999999988764 789999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHH
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (493)
++.|++.+++++| +|+||.|+++++||||++++|+|+++|++++++++.|+|. +++++||++++.+++++.++++++.
T Consensus 245 l~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~ 323 (453)
T cd07149 245 LEKAVERCVSGAF-ANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAV 323 (453)
T ss_pred HHHHHHHHHHHHH-HhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999885 6789999999999999999999986
Q ss_pred h-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 319 V-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 319 ~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
. ++++++||.. .|+|+.|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++++
T Consensus 324 ~~ga~v~~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~d~~~~~~~ 401 (453)
T cd07149 324 EGGARLLTGGKR--DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKA 401 (453)
T ss_pred HCCCEEEeCCCC--CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEcCCHHHHHHH
Confidence 5 6699999865 478999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
++++++|+|+||+++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|.
T Consensus 402 ~~~l~~g~v~iN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 402 ARELEVGGVMINDSSTF-RVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC 452 (453)
T ss_pred HHHcCcCeEEECCCCCC-CCCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence 99999999999987643 3467999999999999999999999999999885
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-86 Score=687.32 Aligned_cols=424 Identities=26% Similarity=0.429 Sum_probs=392.9
Q ss_pred HHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhc
Q 011107 18 AASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWM 97 (493)
Q Consensus 18 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~ 97 (493)
|++++++.|++|++.|+.+|.++|.++|++++++|++++++|+++++.|+|||..++. .|+..+++.+++++....+..
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~-~ei~~~~~~l~~~~~~~~~~~ 79 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAA-FEVGAAIAILREAAGLPRRPE 79 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999999999999999999999999999999986 599999999999988776542
Q ss_pred CCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH-HHHHHHHHhhh-cCC
Q 011107 98 TPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS-SSLLAKLVGEY-MDL 175 (493)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~-~~~l~~~l~~a-lP~ 175 (493)
. ..... ...+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.+ +..+.+++.++ +|+
T Consensus 80 ~-~~~~~--~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~ 156 (431)
T cd07104 80 G-EILPS--DVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPK 156 (431)
T ss_pred C-ccccC--CCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCc
Confidence 2 11111 1123456789999999999999999999999999999999999999999999998 56899999999 999
Q ss_pred CcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHHHHhhcc
Q 011107 176 SSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWG 253 (493)
Q Consensus 176 g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~~~~~ 253 (493)
|++|++++ +.+.+..|++|+ ++.|.||||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|
T Consensus 157 gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~- 235 (431)
T cd07104 157 GVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAF- 235 (431)
T ss_pred ccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-
Confidence 99999999 455789999994 999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-CCeEEeCCccCC
Q 011107 254 CNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDK 331 (493)
Q Consensus 254 ~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~~~~gg~~~~ 331 (493)
+|+||.|+++++||||++++|+|+++|+++++++++|+|. +++++||++++.+++++.++++++.. ++++++||..
T Consensus 236 ~~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~-- 313 (431)
T cd07104 236 LHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY-- 313 (431)
T ss_pred hcCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC--
Confidence 9999999999999999999999999999999999999885 67899999999999999999998865 6799999865
Q ss_pred CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcccceEEEcCC
Q 011107 332 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDT 411 (493)
Q Consensus 332 ~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~ 411 (493)
+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~ 393 (431)
T cd07104 314 EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQ 393 (431)
T ss_pred CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCC
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 412 AVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 412 ~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
+.+ ..+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 394 ~~~-~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~ 430 (431)
T cd07104 394 TVN-DEPHVPFGGVKASGGGRFGGPASLEEFTEWQWIT 430 (431)
T ss_pred CCC-CCCCCCCCCcccccCCccchHHHHHHhhceeEEe
Confidence 765 4578999999999999999999999999999985
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-86 Score=691.65 Aligned_cols=440 Identities=24% Similarity=0.379 Sum_probs=406.8
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCC-CHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTK-SYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~-~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
.++++++++.++.+|+++++++|++|++.|+.. |.++|.++|++++++|++++++|++++++|+|||..++. .|+..+
T Consensus 25 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~ev~~~ 103 (473)
T cd07082 25 DGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEEVANLLMWEIGKTLKDAL-KEVDRT 103 (473)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHH-HHHHHH
Confidence 578999999999999999999999999999988 999999999999999999999999999999999999986 599999
Q ss_pred HHHHHHHHHHHHhhcCCcccccccc--cCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchH
Q 011107 83 KTSIKSALKELKHWMTPEKAKTSIT--TFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~ 160 (493)
++.++++++.++++.+.. ...... ..+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.
T Consensus 104 ~~~l~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL~aGN~vilKps~~~~~ 182 (473)
T cd07082 104 IDYIRDTIEELKRLDGDS-LPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVL 182 (473)
T ss_pred HHHHHHHHHHHHHhcCCc-ccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCCCcH
Confidence 999999999888764322 111110 12345678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhC-CCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCC
Q 011107 161 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 161 ~~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~-~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~d 237 (493)
++..+.+++.++ +|+|++|+++| +.+.+..|+.| ++|.|+||||+++|+.|.+.++ ++|+++|+||+||+||++|
T Consensus 183 ~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelgg~n~~iV~~d 260 (473)
T cd07082 183 LGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHP--MKRLVLELGGKDPAIVLPD 260 (473)
T ss_pred HHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhC--CCcEEEEcCCCCeEEECCC
Confidence 999999999998 99999999999 55668999988 4999999999999999998876 7999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
||++.|++.+++++| .++||.|+++++||||++++|+|+++|.+++++++.|+|. +.+++||++++.+++++++++++
T Consensus 261 adl~~aa~~i~~~~~-~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~ 339 (473)
T cd07082 261 ADLELAAKEIVKGAL-SYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDD 339 (473)
T ss_pred CCHHHHHHHHHHHHH-HhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999885 67899999999999999999998
Q ss_pred HHh-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 011107 317 DKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (493)
Q Consensus 317 a~~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 395 (493)
+.. ++++++||... .|+|+.|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+.
T Consensus 340 a~~~ga~~~~gg~~~-~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~ 418 (473)
T cd07082 340 AVAKGATVLNGGGRE-GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKAR 418 (473)
T ss_pred HHHCCCEEEeCCccC-CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHHHHhCCCCCceEEEEeCCHHHHH
Confidence 865 67999999764 3899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeE
Q 011107 396 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 450 (493)
Q Consensus 396 ~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~ 450 (493)
++++++++|+|+||+++.+ ..+.+||||+|.||+|+++|.+|+++||+.|+|++
T Consensus 419 ~~~~~l~~G~v~iN~~~~~-~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~~ 472 (473)
T cd07082 419 KLADALEVGTVNINSKCQR-GPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVI 472 (473)
T ss_pred HHHHhCCcceEEECCCCCC-CCCCCCCCcccccccCCCChHHHHHHhhceeEEEE
Confidence 9999999999999997654 34568999999999999999999999999999865
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-86 Score=691.13 Aligned_cols=423 Identities=20% Similarity=0.303 Sum_probs=391.5
Q ss_pred hhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHH
Q 011107 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT 84 (493)
Q Consensus 5 ~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~ 84 (493)
+|++++++..+.+|+++++++|++||..|+.+|..+|.++|++++++|++++++|++++++|+|||..++. .|+..+++
T Consensus 62 ~e~i~~~~~~~~~dv~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~i~ 140 (500)
T TIGR01238 62 RDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLELHMPELMALCVREAGKTIHNAI-AEVREAVD 140 (500)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999996 59999999
Q ss_pred HHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHH
Q 011107 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (493)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~ 164 (493)
.+++++...+.++. ...++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..
T Consensus 141 ~l~~~a~~~~~~~~---------------~~~~~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~ 205 (500)
T TIGR01238 141 FCRYYAKQVRDVLG---------------EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYR 205 (500)
T ss_pred HHHHHHHHHHHhcC---------------ceeccCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHH
Confidence 99999987765421 135899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccc---cchhhhcCCCCeEEEcCCC
Q 011107 165 LAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL---TPVLLELGGKSPVVFDSGI 238 (493)
Q Consensus 165 l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~---~~~~~elgG~~p~iV~~da 238 (493)
+.+++.++ +|+|+||+++| +.+.+..|+.|+ ++.|+||||+.+|+.|++.+++++ +|+++|+|||||+||++||
T Consensus 206 l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~~v~lElGGknp~IV~~dA 285 (500)
T TIGR01238 206 AVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDSTA 285 (500)
T ss_pred HHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhcccCCceEEEecCCcCcEEECCCC
Confidence 99999999 99999999998 457889999985 999999999999999999999876 7999999999999999999
Q ss_pred CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHH
Q 011107 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 239 Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
|+|.|++.+++++| .|+||.|++++|||||++++|+|+++|.++++++++|+|. +++++||++++.++++++++++++
T Consensus 286 dld~Aa~~i~~~~f-~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a 364 (500)
T TIGR01238 286 LPEQVVRDVLRSAF-DSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHM 364 (500)
T ss_pred CHHHHHHHHHHHHH-hcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999884 789999999999999999999998
Q ss_pred HhC-CeEEeCCc---c-CCCCceeeceEecCCCCCCcccccccccceeeeEeeC--CHHHHHHHHhcCCCCcEEEEecCC
Q 011107 318 KVS-GKIVHGGE---R-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTNN 390 (493)
Q Consensus 318 ~~~-~~~~~gg~---~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d 390 (493)
.+. ++++.|+. . ...|+|++|||+.. ++|.+++||+||||++|++|+ ++||||+++|+++|||+++|||+|
T Consensus 365 ~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d 442 (500)
T TIGR01238 365 SQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRI 442 (500)
T ss_pred HHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCC
Confidence 764 46553322 1 13589999999973 688999999999999999998 799999999999999999999999
Q ss_pred HHHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCC-CcchHHHHHHhhhcc
Q 011107 391 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKK 446 (493)
Q Consensus 391 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G-~~~g~~~~~~~t~~k 446 (493)
.+.+.++++++++|+|+||+...+...+.+||||+|.||+| +++|.+++++|++.|
T Consensus 443 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~~~~~~k 499 (500)
T TIGR01238 443 ETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQVQ 499 (500)
T ss_pred HHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHHHHHhhc
Confidence 99999999999999999998765544466899999999999 799999999999987
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-86 Score=675.13 Aligned_cols=401 Identities=24% Similarity=0.402 Sum_probs=370.1
Q ss_pred HHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEE
Q 011107 45 LKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVL 124 (493)
Q Consensus 45 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 124 (493)
|++++++|++++++|++++++|+|||..+++ .|+..+++.+++++...+.+.... ... ...+...+++++|+|||+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~-~~~--~~~~~~~~~~~~P~Gvv~ 76 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEI-IQS--DRPGENILLFKRALGVTT 76 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-cCC--CCCCceeEEEEecccEEE
Confidence 5789999999999999999999999999997 599999999999988777653321 111 112335678899999999
Q ss_pred EEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEE
Q 011107 125 IISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICY 201 (493)
Q Consensus 125 ~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~f 201 (493)
+|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|+++| +.+.+..|++|+ ++.|.|
T Consensus 77 ~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~f 156 (409)
T PRK10090 77 GILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSM 156 (409)
T ss_pred EECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEE
Confidence 999999999999999999999999999999999999999999999999 99999999999 567789999985 999999
Q ss_pred eCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHH
Q 011107 202 TGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLK 281 (493)
Q Consensus 202 tGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~ 281 (493)
|||+++|+.|++.+++++||+++|+|||||+||++|||+|.|++.+++++| .|+||.|++++|||||++++|+|+++|.
T Consensus 157 tGs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~ 235 (409)
T PRK10090 157 TGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLG 235 (409)
T ss_pred ECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHH-HhcCCCCCCCeEEEEcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHhhcCCCCC-C-CCcccccCCHHHHHHHHHHHHHHHh-CCeEEeCCccCC-CCceeeceEecCCCCCCccccccccc
Q 011107 282 NELENFYGKNPL-E-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFG 357 (493)
Q Consensus 282 ~~~~~~~~g~~~-~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~~~~gg~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~fg 357 (493)
+++++++.|+|. + ++++||+++++++++++++|+++.+ ++++++||..+. .|+|++|||+++++++|++++||+||
T Consensus 236 ~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~Fg 315 (409)
T PRK10090 236 EAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFG 315 (409)
T ss_pred HHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCC
Confidence 999999999885 4 7899999999999999999999865 679999997643 57899999999999999999999999
Q ss_pred ceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHH
Q 011107 358 PLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKF 437 (493)
Q Consensus 358 Pvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~ 437 (493)
||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.|+||++..+ .+..||||+|.||+|+++|.+
T Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~G~~~g~~ 393 (409)
T PRK10090 316 PVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE--AMQGFHAGWRKSGIGGADGKH 393 (409)
T ss_pred ceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCcccccCCccchHH
Confidence 999999999999999999999999999999999999999999999999999987654 345799999999999999999
Q ss_pred HHHHhhhccEEeEec
Q 011107 438 SFDVFSHKKAVLSRG 452 (493)
Q Consensus 438 ~~~~~t~~k~v~~~~ 452 (493)
|+++||+.|+|.+.+
T Consensus 394 gl~~f~~~k~v~~~~ 408 (409)
T PRK10090 394 GLHEYLQTQVVYLQS 408 (409)
T ss_pred HHHHhcceEEEEEec
Confidence 999999999997653
|
|
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-85 Score=725.91 Aligned_cols=441 Identities=21% Similarity=0.325 Sum_probs=409.1
Q ss_pred hhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHH
Q 011107 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT 84 (493)
Q Consensus 5 ~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~ 84 (493)
+++|++++.++.+++++|+++|++||+.|+.+|.++|.++|++++++|++++++|+.+++.|+|||..++. .|+..+++
T Consensus 573 ~~~vg~v~~a~~~~v~~Ai~aA~~A~~~W~~~~~~~Ra~iL~kaAdll~~~~~eL~~l~~~E~GK~~~~a~-~EV~eaid 651 (1038)
T PRK11904 573 RRVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEANRAELIALCVREAGKTLQDAI-AEVREAVD 651 (1038)
T ss_pred CeeEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 45899999999999999999999999999999999999999999999999999999999999999999996 69999999
Q ss_pred HHHHHHHHHHhhcCC-cccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 85 SIKSALKELKHWMTP-EKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 85 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
.++|++..++.+... ...+. ..+..++..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 652 ~lr~ya~~a~~~~~~~~~l~g---~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~ 728 (1038)
T PRK11904 652 FCRYYAAQARRLFGAPEKLPG---PTGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAA 728 (1038)
T ss_pred HHHHHHHHHHHhhCCCcccCC---CCCceeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHH
Confidence 999999998876532 22221 12456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhcc---ccchhhhcCCCCeEEEcCC
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~---~~~~~~elgG~~p~iV~~d 237 (493)
.+.+++.++ +|+|++|+++|+ .+.+..|+.|+ ++.|+||||+++|+.|.+.++.+ .+|+++|+|||||+||++|
T Consensus 729 ~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~d 808 (1038)
T PRK11904 729 EAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQNAMIVDST 808 (1038)
T ss_pred HHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEECCC
Confidence 999999999 999999999994 45899999995 99999999999999999888765 6899999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
||+|.|++.+++|+| .++||.|+++++||||++++|+|+++|+++++++++|+|. .++++||++++.+++++.++|++
T Consensus 809 Adld~Av~~iv~saF-~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~ 887 (1038)
T PRK11904 809 ALPEQVVDDVVTSAF-RSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIER 887 (1038)
T ss_pred CCHHHHHHHHHHHHH-hCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999995 68999999999999999999999
Q ss_pred HHhCCeEEeCCccCC---CCceeeceEecCCCCCCcccccccccceeeeEeeC--CHHHHHHHHhcCCCCcEEEEecCCH
Q 011107 317 DKVSGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTNNK 391 (493)
Q Consensus 317 a~~~~~~~~gg~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~ 391 (493)
+++++++++||..++ .|+|+.|||+. .+++.+++||+||||++|++|+ +++|+|+++|+++|||+++|||+|.
T Consensus 888 a~~ga~vl~gg~~~~~~~~G~fv~PTvi~--~~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~ 965 (1038)
T PRK11904 888 MKREARLLAQLPLPAGTENGHFVAPTAFE--IDSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIE 965 (1038)
T ss_pred HHcCCEEEeCCCCCCCCCCceEEeeEEEc--cCCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCH
Confidence 988889999997643 48999999996 3678889999999999999998 6999999999999999999999999
Q ss_pred HHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCC-CcchHHHHHHhhhccEEeEec
Q 011107 392 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 392 ~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G-~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+.++++++++++|.|+||+.+++...+..||||+|.||+| +.+|++++.+|++.|+|.++.
T Consensus 966 ~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~~ktv~~~~ 1027 (1038)
T PRK11904 966 ETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFATEKTVTVNT 1027 (1038)
T ss_pred HHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHhceEEEEEcc
Confidence 9999999999999999999877666677899999999999 578999999999999998764
|
|
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-85 Score=709.06 Aligned_cols=440 Identities=18% Similarity=0.263 Sum_probs=392.3
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHH-hhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGT-FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
.++++++++..+ +|+++|+++|++| ++.|+++|..+|.++|++++++|+++.++|++ ++.|+|||..+++ .|+..+
T Consensus 28 tg~~i~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-l~~e~GK~~~~a~-~ev~~~ 104 (675)
T PRK11563 28 TGEPVARVSSEG-LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKEELYA-LSAQTGATRRDSW-IDIEGG 104 (675)
T ss_pred CCCEEEEEcCCc-HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH-HHHHhCCCHHHHH-HHHHHH
Confidence 578999999987 6999999999998 79999999999999999999999999999998 5999999999997 499999
Q ss_pred HHHHHHHHHHHHhhcCC-------cccccccccCC-CCceeeeecc-eEEEEEccCchhHHhhhhHHHHHHHhCCEEEEe
Q 011107 83 KTSIKSALKELKHWMTP-------EKAKTSITTFP-SSAEIVPEPF-GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLK 153 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~-~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlk 153 (493)
++.+++++..+++.... +..+. ...+ ...++.++|+ |||++|+|||||+.++++++++||++||+||+|
T Consensus 105 ~~~~~~~a~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~p~~GVv~~I~PwNfP~~~~~~~i~pALaaGN~VV~K 182 (675)
T PRK11563 105 IGTLFTYASKGRRELPNDTVLVEGEVEPL--SKGGTFAGRHILTPLEGVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVK 182 (675)
T ss_pred HHHHHHHHHHHhhhccccccccCCccccc--cCCCcccceEEEeecCceEEEECCCchHHHHHHHHHHHHHHcCCeEEEE
Confidence 99999999887654321 11110 0011 1246788997 999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHhhh--cCCCcEEEEeCChHhHHHHHhC--CCCeEEEeCCHHHHHHHHHH--HhccccchhhhcC
Q 011107 154 PSEVAPASSSLLAKLVGEY--MDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAA--AAKHLTPVLLELG 227 (493)
Q Consensus 154 ps~~~~~~~~~l~~~l~~a--lP~g~v~vv~g~~~~~~~L~~~--~v~~v~ftGs~~~g~~i~~~--a~~~~~~~~~elg 227 (493)
||+.+|+++..+.+++.++ +|+|++|+++|+.. . +..+ .++.|.||||+++|+.|++. ++.++||+++|+|
T Consensus 183 Pse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~--~-~~~~~~~i~~v~FTGS~~~G~~i~~~~~a~~~~~~~~lELG 259 (675)
T PRK11563 183 PATATAYLTEAVVRLIVESGLLPEGALQLICGSAG--D-LLDHLDGQDVVTFTGSAATAQKLRAHPNVVANSVPFTAEAD 259 (675)
T ss_pred CCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH--H-HhhcCCCCCEEEEECcHHHHHHHHhhhhhhhCCceEEEecC
Confidence 9999999999999999997 79999999998522 2 4443 49999999999999999985 4588999999999
Q ss_pred CCCeEEEcCCCC-----HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCccccc
Q 011107 228 GKSPVVFDSGIN-----LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRI 301 (493)
Q Consensus 228 G~~p~iV~~daD-----l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl 301 (493)
||||+||++||| +|.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|. +++++||+
T Consensus 260 Gknp~IV~~DAd~~~~dld~aa~~i~~~~f-~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~d~~t~~GPl 338 (675)
T PRK11563 260 SLNAAILGPDATPGTPEFDLFVKEVVREMT-VKAGQKCTAIRRAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGAL 338 (675)
T ss_pred CcCceEECCCCCcCchhHHHHHHHHHHHHH-HhCCCccccceeEEeeHHHHHHHHHHHHHHHhcCccCCCCCCCCcccCC
Confidence 999999999995 9999999999999 9999999999999999999999999999999999999985 68999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCeEEeCCccC--------CCCceeeceEecCCCC--CCcccccccccceeeeEeeCCHHHH
Q 011107 302 VNSNHFARLSKLLDDDKVSGKIVHGGERD--------KNKLRIAPTLLLDVPR--DSLIMSEEIFGPLLPILTVDKIEDS 371 (493)
Q Consensus 302 ~~~~~~~~~~~~i~~a~~~~~~~~gg~~~--------~~g~~~~Ptvl~~v~~--~~~i~~eE~fgPvl~v~~~~~~~ea 371 (493)
+++.+++++.++|+++.+.+++++||... ..|+|++|||+.++++ ++++++||+||||++|++|+|+|||
T Consensus 339 i~~~~~~~i~~~i~~a~~~a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~~i~~eEiFGPVl~V~~~~~~~ea 418 (675)
T PRK11563 339 ASLEQREDVREKVAALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEA 418 (675)
T ss_pred cCHHHHHHHHHHHHHHHhCCEEEECCcccccccCCCCCCCeeECCEEEeccCchhhhhHhhccccCCceEEEecCCHHHH
Confidence 99999999999999997669999999531 2589999999999998 5799999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEecCCHHHHHHHHhhcc--cceEEEcCCCc------c-cCCCCCCccCCCCCCCCCc-chHHHHHH
Q 011107 372 FDIINSGTKPLAAYLFTNNKKLKQQFVETVS--AGGLVINDTAV------H-LAVHSLPFGGVQESGMGAY-HGKFSFDV 441 (493)
Q Consensus 372 i~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~--~g~v~iN~~~~------~-~~~~~~p~gG~~~SG~G~~-~g~~~~~~ 441 (493)
|+++|+++|||++||||+|.+.+.+++++++ +|.||||+.+. + ...+.+||||+|.||+|++ +|.+++++
T Consensus 419 i~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~~g~~~~~~ 498 (675)
T PRK11563 419 IELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKH 498 (675)
T ss_pred HHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcCCCcCCCCCCCCCccccchhHHHH
Confidence 9999999999999999999999999999997 99999997531 1 1236789999999999999 46999999
Q ss_pred hhhccEEeEec
Q 011107 442 FSHKKAVLSRG 452 (493)
Q Consensus 442 ~t~~k~v~~~~ 452 (493)
|++.|+|...+
T Consensus 499 f~~~k~~~~~~ 509 (675)
T PRK11563 499 YMQRTAVQGSP 509 (675)
T ss_pred hheeeeeecCH
Confidence 99999986543
|
|
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-82 Score=660.15 Aligned_cols=421 Identities=16% Similarity=0.212 Sum_probs=374.2
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhc--CCCCHHHH----HHHHHHHHHHHHhc--HHHHHHHHHhhcCCCchhhh
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASG--KTKSYGWR----VSQLKSLMKMLNER--EPDIVDALRQDLDKPELESS 75 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w--~~~~~~~R----~~~L~~~a~~l~~~--~~~la~~~~~e~Gk~~~~a~ 75 (493)
.++++++++.++.+|+++|+++|++||+.| +.++..+| .++|+++++.|+++ .++|++++++|+|||+.+++
T Consensus 21 t~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~~~~~~la~~~~~e~GK~~~~a~ 100 (489)
T cd07126 21 NGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQAL 100 (489)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcCCCHHHHHHHHHHHcCCCHHHHH
Confidence 478999999999999999999999999988 56779999 89999999999998 49999999999999999986
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCC
Q 011107 76 IYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPS 155 (493)
Q Consensus 76 ~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps 155 (493)
.|+..+++.++++++...+...... ..+....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 101 -~Ev~~~~~~~~~~a~~~~~~~g~~~-~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l~~~~ia~ALaaGN~VVlKPS 178 (489)
T cd07126 101 -GEVVVTRKFLENFAGDQVRFLARSF-NVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVD 178 (489)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCcee-ccCCCCCCceeEEEEecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 6999999999999987766543221 00111124456889999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhC-CCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEE
Q 011107 156 EVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV 233 (493)
Q Consensus 156 ~~~~~~~~~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~-~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~i 233 (493)
+.+|.++.+|.+++.++ +|+|++|+|+|+.+.+..|+.| ++++|+||||+++|+.|...++ +++.+|+||+||+|
T Consensus 179 e~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~~~~l~~~~~v~~V~FTGS~~vGr~i~~~~g---~k~~lElgg~~~~I 255 (489)
T cd07126 179 SKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKILLEANPRMTLFTGSSKVAERLALELH---GKVKLEDAGFDWKI 255 (489)
T ss_pred CCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchhHHHHhcCCCCCEEEEECCHHHHHHHHHHhC---CCEEeecCCCCceE
Confidence 99999999999999999 9999999999954556668877 5999999999999999988766 57899999999999
Q ss_pred EcCCC-CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcc-hHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHH
Q 011107 234 FDSGI-NLKVACRRMIMGKWGCNNGQACISPDHIITTKDY-APKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLS 311 (493)
Q Consensus 234 V~~da-Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~ 311 (493)
|++|| |+|.|++.+++++| .|+||.|++++|||||+++ +|+|+++|++.+++++.++ +++||+++.. .+++.
T Consensus 256 V~~Da~dld~a~~~~~~g~f-~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~g~----~~~Gpli~~~-~~~v~ 329 (489)
T cd07126 256 LGPDVSDVDYVAWQCDQDAY-ACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED----LTIGPVLTWT-TERIL 329 (489)
T ss_pred ECCCcccHHHHHHHHHHHHH-hcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhcccCC----CcCCCCcCHH-HHHHH
Confidence 99999 99999999999999 9999999999999999995 6999999999999988763 5899999998 89999
Q ss_pred HHHHHHH--hCCeEEeCCccCC-----CC-ceeeceEecC------CCCCCcccccccccceeeeEeeCC--HHHHHHHH
Q 011107 312 KLLDDDK--VSGKIVHGGERDK-----NK-LRIAPTLLLD------VPRDSLIMSEEIFGPLLPILTVDK--IEDSFDII 375 (493)
Q Consensus 312 ~~i~~a~--~~~~~~~gg~~~~-----~g-~~~~Ptvl~~------v~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~ 375 (493)
++++++. +++++++||..+. .+ .|++|||+.. ++++|++++||+||||++|++|+| ++||++++
T Consensus 330 ~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~~~deai~~a 409 (489)
T cd07126 330 DHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVLEAL 409 (489)
T ss_pred HHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcCCEEEEEEECCCCHHHHHHHH
Confidence 9999986 4779999997642 23 3899999841 678999999999999999999999 99999999
Q ss_pred hcCCCCcEEEEecCCHHHHHHHHhhcccce--EEEcCCCcccCCC--CCCccCCCCCCCCCcch
Q 011107 376 NSGTKPLAAYLFTNNKKLKQQFVETVSAGG--LVINDTAVHLAVH--SLPFGGVQESGMGAYHG 435 (493)
Q Consensus 376 n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~--v~iN~~~~~~~~~--~~p~gG~~~SG~G~~~g 435 (493)
|+++|||++||||+|.++++++++++++|+ |+||+.+.+.... ..||||+|.||+|+++.
T Consensus 410 N~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~g~~~~ 473 (489)
T cd07126 410 ERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGTPEA 473 (489)
T ss_pred hCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCCCCHhH
Confidence 999999999999999999999999999999 6699877654221 29999999999998764
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-82 Score=708.32 Aligned_cols=425 Identities=19% Similarity=0.293 Sum_probs=394.7
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.+++|++++.++.++++.|+++|++||..|+.+|.++|.++|++++++|+++.++|+.+++.|+|||..++. .||..++
T Consensus 669 ~~~~vg~v~~a~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~~l~~~EaGKt~~~A~-~EV~eai 747 (1318)
T PRK11809 669 PRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMGLLVREAGKTFSNAI-AEVREAV 747 (1318)
T ss_pred CCeeEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 367899999999999999999999999999999999999999999999999999999999999999999985 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
++++||+...+.... ...++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.
T Consensus 748 dflryyA~~a~~~~~---------------~~~~~PlGVV~~IsPWNFPlai~~g~iaaALaAGN~VV~KPseqTpl~a~ 812 (1318)
T PRK11809 748 DFLRYYAGQVRDDFD---------------NDTHRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAA 812 (1318)
T ss_pred HHHHHHHHHHHHhcC---------------CceeecccEEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCcHHHHH
Confidence 999999987654211 24689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccc------cchhhhcCCCCeEEE
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL------TPVLLELGGKSPVVF 234 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~------~~~~~elgG~~p~iV 234 (493)
.+++++.++ +|+|++|+++| +.+.+..|+.|+ |+.|+||||+++|+.|.+.+++++ +|+++|+||+||+||
T Consensus 813 ~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~~l~~~g~~~pliaElGGkNa~IV 892 (1318)
T PRK11809 813 QAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIAETGGQNAMIV 892 (1318)
T ss_pred HHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhhhcccccCceeEEEecCCccceEE
Confidence 999999999 99999999999 556799999995 999999999999999999988765 799999999999999
Q ss_pred cCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHH
Q 011107 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKL 313 (493)
Q Consensus 235 ~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~ 313 (493)
++|||+|.|++.+++|+| .++||.|++.++||||++++|+|++.|+..++++++|+|. .++++||++++.+++++.++
T Consensus 893 dsdAdle~Av~~iv~sAF-~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~~~~tdvGPvId~~a~~~i~~~ 971 (1318)
T PRK11809 893 DSSALTEQVVADVLASAF-DSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERH 971 (1318)
T ss_pred CCCCCHHHHHHHHHHHHH-hcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcccccCCcCCCCCHHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999999999999999995 68999999999999999999
Q ss_pred HHHHHh-CCeEEeCCccC----CCCceeeceEecCCCCCCcccccccccceeeeEeeC--CHHHHHHHHhcCCCCcEEEE
Q 011107 314 LDDDKV-SGKIVHGGERD----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYL 386 (493)
Q Consensus 314 i~~a~~-~~~~~~gg~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v 386 (493)
|+++++ +++++.||... ..|+|++|||+.. +++.++++|+||||++|++|+ +++|+|+++|+++|||+++|
T Consensus 972 I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~gV 1049 (1318)
T PRK11809 972 IQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGV 1049 (1318)
T ss_pred HHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEE
Confidence 999966 45777776542 3589999999973 668889999999999999996 79999999999999999999
Q ss_pred ecCCHHHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCC-cchHHHHHHhhhccE
Q 011107 387 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSFDVFSHKKA 447 (493)
Q Consensus 387 ~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~-~~g~~~~~~~t~~k~ 447 (493)
||+|.+.++++++++++|.|+||+...+...+..||||+|.||+|. .+|++++..|+..+.
T Consensus 1050 ~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~f~~~~~ 1111 (1318)
T PRK11809 1050 HTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLATRP 1111 (1318)
T ss_pred EeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHHHhccCC
Confidence 9999999999999999999999997766555678999999999995 699999999999874
|
|
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-83 Score=603.54 Aligned_cols=472 Identities=26% Similarity=0.405 Sum_probs=436.8
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++-++.+|..++.|+|+.+..|++|++.|.+.++..|.++|+.+.+.+-+|.|.+++..++||||+..++.++||.-+.
T Consensus 73 tg~yLG~fp~~~~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmvDAs~GEIlvTl 152 (583)
T KOG2454|consen 73 TGKYLGYFPALSPTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTMVDASLGEILVTL 152 (583)
T ss_pred CcceeeecccCChhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCchhhhhhHhHHHHHH
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+.+...+.++|++++..+......-...+++++|+||++.|.|||||+.+.+.+++.||.+||++|+|-|+.+.+++.
T Consensus 153 EKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVvK~SE~~~WS~~ 232 (583)
T KOG2454|consen 153 EKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVVKVSEHASWSGC 232 (583)
T ss_pred HHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEEEeecceeeehh
Confidence 99999999999999877655444444456789999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHhhh-----cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCC
Q 011107 164 LLAKLVGEY-----MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 164 ~l~~~l~~a-----lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~d 237 (493)
...++++.+ -|+++||++++-.+++++|++|+ ++++.|.||..+++.|++.++++++|+++|+|||++.||++|
T Consensus 233 fy~e~ir~~L~a~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~LTPv~lELGGKDafIi~dd 312 (583)
T KOG2454|consen 233 FYFEIIRAALAAVGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTLTPVTLELGGKDAFIICDD 312 (583)
T ss_pred hHHHHHHHHHHHcCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhcCcEEEeecCcccEEEecc
Confidence 888887764 49999999999778999999995 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
+|++..+.-+++|.| ..+||.|...+|++||+++||.|+..|..+++.++.|.|. ...|||.+++...++.++++++|
T Consensus 313 a~l~~v~si~mRGtf-QSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nrfdhLesLv~D 391 (583)
T KOG2454|consen 313 ADLSHVASIAMRGTF-QSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQNRFDHLESLVND 391 (583)
T ss_pred ccHHHHHHHHHhhhh-hhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhccchHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999988775 78899999999999999999999
Q ss_pred HHh-CCeEEeCCcc-----CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCC
Q 011107 317 DKV-SGKIVHGGER-----DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390 (493)
Q Consensus 317 a~~-~~~~~~gg~~-----~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 390 (493)
|.. |+++++||.+ ...|.|++||++.+++++|.|++||.|||+++++++++.|++++++|+++|||.++||+.|
T Consensus 392 Av~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~fgLG~sVFg~d 471 (583)
T KOG2454|consen 392 AVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSRFGLGCSVFGGD 471 (583)
T ss_pred HHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCCcccccceecccc
Confidence 965 6799999975 2468899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec-----CCCCCCccCCCCc
Q 011107 391 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG-----FIGDVPVRYPPYT 465 (493)
Q Consensus 391 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~-----~~~~~~~~~~p~~ 465 (493)
..+++.+++++++|.|.||+..... ...+||||+|.||+||..|.+|++..+..|+|.... +.+|..+.||-|.
T Consensus 472 k~~c~y~a~~lqtG~vAiNDFasfY-~cQlPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~yd~~~~~~t~ip~aldypi~~ 550 (583)
T KOG2454|consen 472 KHRCKYIASQLQTGVVAINDFASFY-MCQLPFGGVKDSGYGRFAGIEGLRGCCNVKSVAYDRVAENATEIPEALDYPIYG 550 (583)
T ss_pred HHHHHHHHhhhhccceeehhhhhhh-eeccccCCccCCCccccccHHHHHHHhcccceeccchhhhhccCCccccccCcC
Confidence 9999999999999999999987654 456999999999999999999999999999997764 3467788898777
Q ss_pred hhH-HHHHHHHHh
Q 011107 466 KGK-LRLLKVLIS 477 (493)
Q Consensus 466 ~~~-~~~~~~~~~ 477 (493)
..+ +..++.|+-
T Consensus 551 s~kaW~fvrsli~ 563 (583)
T KOG2454|consen 551 SLKAWDFVRSLID 563 (583)
T ss_pred hhhHHHHHHHHHH
Confidence 444 566666663
|
|
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-82 Score=707.18 Aligned_cols=430 Identities=20% Similarity=0.321 Sum_probs=398.1
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+++++|+++|++||+.|+.+|.++|.++|++++++|++++++|+++++.|+||+..++. .|+..++
T Consensus 577 ~~~~vg~v~~a~~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~eL~~l~~~E~GKt~~ea~-~Ev~eai 655 (1208)
T PRK11905 577 HDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELFALAVREAGKTLANAI-AEVREAV 655 (1208)
T ss_pred CCceEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 378999999999999999999999999999999999999999999999999999999999999999999995 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++|++...+.... ...++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.
T Consensus 656 d~lr~ya~~a~~~~~---------------~~~~~P~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~KPse~tpl~a~ 720 (1208)
T PRK11905 656 DFLRYYAAQARRLLN---------------GPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAA 720 (1208)
T ss_pred HHHHHHHHHHHHhcC---------------CceecCccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEEeCCcccHHHHH
Confidence 999999988765421 13578999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhcc---ccchhhhcCCCCeEEEcCC
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~---~~~~~~elgG~~p~iV~~d 237 (493)
.+++++.++ +|+|++|+|+| +.+.+..|+.|+ |+.|+||||+++|+.|.+.++++ .+|+++|+|||||+||++|
T Consensus 721 ~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~~~~~~pli~ElGGkN~~IV~~d 800 (1208)
T PRK11905 721 RAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQNAMIVDSS 800 (1208)
T ss_pred HHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhhcCCCCeEEEecCCcCeEEEcCC
Confidence 999999999 99999999999 455899999995 99999999999999999998876 4899999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
||+|.|++.+++|+| .++||.|+++++||||++++|+|+++|+++++++++|||. .++++||++++.+++++.++|++
T Consensus 801 Adle~Av~~iv~saF-~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~t~~GPvId~~a~~~i~~~I~~ 879 (1208)
T PRK11905 801 ALPEQVVADVIASAF-DSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEA 879 (1208)
T ss_pred CCHHHHHHHHHHHHH-hcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhccCCccCccCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999995 68899999999999999999999
Q ss_pred HHhCC-eEEeCCccC--CCCceeeceEecCCCCCCcccccccccceeeeEeeC--CHHHHHHHHhcCCCCcEEEEecCCH
Q 011107 317 DKVSG-KIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTNNK 391 (493)
Q Consensus 317 a~~~~-~~~~gg~~~--~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~ 391 (493)
+++.| .++.|+... ..|+|+.|||+. + +++.++++|+||||++|++|+ +++|+|+++|+++|||+++|||+|.
T Consensus 880 a~~~G~~l~~g~~~~~~~~G~fv~PTVl~-~-~~~~~~~eEiFGPVL~V~~y~~~dldeaI~~iN~t~yGLt~~I~S~d~ 957 (1208)
T PRK11905 880 MRAAGRLVHQLPLPAETEKGTFVAPTLIE-I-DSISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHSRID 957 (1208)
T ss_pred HHHCCCEEEEccCCCCCCCCeEEeeEEEe-c-CChHHhcCCccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEcCCH
Confidence 97765 455444322 358999999996 3 678899999999999999997 6999999999999999999999999
Q ss_pred HHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCC-cchHHHHHHhhhccEEeEec
Q 011107 392 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 392 ~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~-~~g~~~~~~~t~~k~v~~~~ 452 (493)
+.++++.+++++|+|+||+.+++...+..||||+|.||+|. .+|++++.+|++.|++.+..
T Consensus 958 ~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k~v~~~~ 1019 (1208)
T PRK11905 958 ETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVREAPTPIPP 1019 (1208)
T ss_pred HHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcceeeccc
Confidence 99999999999999999998776666678999999999995 89999999999999997653
|
|
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-80 Score=640.90 Aligned_cols=416 Identities=17% Similarity=0.250 Sum_probs=368.8
Q ss_pred HHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhh--
Q 011107 19 ASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHW-- 96 (493)
Q Consensus 19 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~-- 96 (493)
+++|+++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++..++..
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~-~ev~~~~~~l~~~a~~~~~~~~ 79 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQ-GELGRTTGQLRLFADLVREGSW 79 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHH-HHHHHHHHHHHHHHHHHHhcCC
Confidence 478999999999999999999999999999999999999999999999999998886 69999999999999877642
Q ss_pred cCCcccccccc----cCCCCceeeeecceEEEEEccCchhHHh--hhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHh
Q 011107 97 MTPEKAKTSIT----TFPSSAEIVPEPFGVVLIISPWNYPFLL--SLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 170 (493)
Q Consensus 97 ~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~--~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~ 170 (493)
.... ...... ..+...+++++|+|||++|+|||||+.+ .++++++||++||+||+|||+.+|.++.++++++.
T Consensus 80 ~~~~-~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~ 158 (454)
T cd07129 80 LDAR-IDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIR 158 (454)
T ss_pred cccc-ccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHH
Confidence 1111 110000 0123357889999999999999999988 55899999999999999999999999999988875
Q ss_pred ----hh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhc--cccchhhhcCCCCeEEEcCCC---
Q 011107 171 ----EY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK--HLTPVLLELGGKSPVVFDSGI--- 238 (493)
Q Consensus 171 ----~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~--~~~~~~~elgG~~p~iV~~da--- 238 (493)
++ +|+|+||+|+| +.+.+..|++|+ ++.|+||||+.+|+.|++.+++ ++||+++|+|||||+||++||
T Consensus 159 ~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~ 238 (454)
T cd07129 159 AALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAE 238 (454)
T ss_pred HHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchH
Confidence 56 99999999999 557899999996 9999999999999999999988 699999999999999999999
Q ss_pred CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCc-chHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 011107 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 239 Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
|+|.|++.+++++| .|+||.|++++|||||++ ++|+|+++|.+++++++. ||++++.+.++..+.++++
T Consensus 239 dl~~aa~~i~~~~~-~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~---------g~~~~~~~~~~~~~~i~~a 308 (454)
T cd07129 239 RGEAIAQGFVGSLT-LGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPA---------QTMLTPGIAEAYRQGVEAL 308 (454)
T ss_pred HHHHHHHHHHHHHh-cCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCC---------CCCcChHHHHHHHHHHHHH
Confidence 89999999999999 999999999999999999 999999999999998764 4677777777788888887
Q ss_pred Hh--CCeEEeCCccCCCCceeeceEecCCC---CCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCC--
Q 011107 318 KV--SGKIVHGGERDKNKLRIAPTLLLDVP---RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN-- 390 (493)
Q Consensus 318 ~~--~~~~~~gg~~~~~g~~~~Ptvl~~v~---~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d-- 390 (493)
.+ ++++++||..+.+|+|++|||+...+ ++|++++||+||||++|++|+|.||+|+++|+++|||+++|||+|
T Consensus 309 ~~~~ga~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~ 388 (454)
T cd07129 309 AAAPGVRVLAGGAAAEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDD 388 (454)
T ss_pred HhcCCcEEEeCCCcCCCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCch
Confidence 54 56999999765568999999997655 689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhc--ccceEEEcCCCcccC-CCCCCccC-CCCCCCCCc--chHHHHHHhhhcc
Q 011107 391 KKLKQQFVETV--SAGGLVINDTAVHLA-VHSLPFGG-VQESGMGAY--HGKFSFDVFSHKK 446 (493)
Q Consensus 391 ~~~~~~~~~~l--~~g~v~iN~~~~~~~-~~~~p~gG-~~~SG~G~~--~g~~~~~~~t~~k 446 (493)
.+.++++++++ ++|+|+||+++.+.. .+.+|||| +|.||.|++ +|.+++++||++-
T Consensus 389 ~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~~ 450 (454)
T cd07129 389 LALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRPV 450 (454)
T ss_pred HHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhcccc
Confidence 79999999999 699999998665432 25899999 999999999 7999999999863
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-80 Score=637.82 Aligned_cols=416 Identities=17% Similarity=0.211 Sum_probs=368.2
Q ss_pred HHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhc-C
Q 011107 20 SLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWM-T 98 (493)
Q Consensus 20 ~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~-~ 98 (493)
++++++|++||..|+++|.++|.++|++++++|++++++|+++++.|+|||. ++. .|+..+++.+++++....... .
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~-~ev~~~i~~~~~~~~~~~~~~~~ 79 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFA-ENICGDQVQLRARAFVIYSYRIP 79 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhh-hhhcchHHHHHHHHHHHHhcccc
Confidence 6799999999999999999999999999999999999999999999999999 554 599999999999988776431 1
Q ss_pred CcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhh-c-CCC
Q 011107 99 PEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-M-DLS 176 (493)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~a-l-P~g 176 (493)
...............+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+.+++.++ + |+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g 159 (442)
T cd07084 80 HEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPE 159 (442)
T ss_pred ccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCcc
Confidence 11110000011235688999999999999999999999999999999999999999999999999999999998 6 999
Q ss_pred cEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCC-CHHHHHHHHHHhhccc
Q 011107 177 SIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI-NLKVACRRMIMGKWGC 254 (493)
Q Consensus 177 ~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~da-Dl~~Aa~~i~~~~~~~ 254 (493)
++|+++|+.+.+..|+.|+ ++.|+||||+++|+.|++.++. +|+++|+|||||+||++|| |+|.|++.+++++| .
T Consensus 160 ~~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~-~ 236 (442)
T cd07084 160 DVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMT-A 236 (442)
T ss_pred ceEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccC--CcEEEeccCcCcEEECCChhhHHHHHHHHHHHHh-c
Confidence 9999999656889999995 9999999999999999998765 8999999999999999999 69999999999999 9
Q ss_pred CCCCcccCCCEEEEcCc-chHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHh--CCeEEeCCccC-
Q 011107 255 NNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV--SGKIVHGGERD- 330 (493)
Q Consensus 255 ~~Gq~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~--~~~~~~gg~~~- 330 (493)
|+||.|+++++||||++ ++|+|+++|.++++++++| ++++||++++.. .++++++.+ ++++++||...
T Consensus 237 ~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g----~~~~gpl~~~~~----~~~i~~a~~~gga~~~~gg~~~~ 308 (442)
T cd07084 237 CSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE----DLLLGPVQTFTT----LAMIAHMENLLGSVLLFSGKELK 308 (442)
T ss_pred ccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC----ccccChhhhHHH----HHHHHHHHhcCCcEEEeCCcccc
Confidence 99999999999999999 9999999999999999887 678999987654 445555543 36899998642
Q ss_pred ------CCCceeeceEecCCCCCC---cccccccccceeeeEeeCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHh
Q 011107 331 ------KNKLRIAPTLLLDVPRDS---LIMSEEIFGPLLPILTVDK--IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 399 (493)
Q Consensus 331 ------~~g~~~~Ptvl~~v~~~~---~i~~eE~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 399 (493)
..|+|++|||+.+++++| ++++||+||||++|++|+| ++|+++++|+++|||+++|||+|.+.++++++
T Consensus 309 ~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~ 388 (442)
T cd07084 309 NHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIG 388 (442)
T ss_pred cCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHH
Confidence 147899999999999997 9999999999999999999 99999999999999999999999999999999
Q ss_pred hc-ccceEEEcCCCcccCCCCCCccC-CCCCCCCCcc-hHHHHHHhhhccEE
Q 011107 400 TV-SAGGLVINDTAVHLAVHSLPFGG-VQESGMGAYH-GKFSFDVFSHKKAV 448 (493)
Q Consensus 400 ~l-~~g~v~iN~~~~~~~~~~~p~gG-~~~SG~G~~~-g~~~~~~~t~~k~v 448 (493)
++ ++|+||||+.++....+..|||| .|.||+|++. |.+++++||+...+
T Consensus 389 ~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 389 NLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAE 440 (442)
T ss_pred HHHhcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeeee
Confidence 99 99999999763333456677776 8899999996 99999999987654
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-78 Score=630.40 Aligned_cols=424 Identities=31% Similarity=0.480 Sum_probs=395.4
Q ss_pred HHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhcCC
Q 011107 20 SLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTP 99 (493)
Q Consensus 20 ~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~ 99 (493)
++++++|++|+..|+.+|.++|.++|+++++.|.++.++|+++++.|+||+..++. .|+..+++.+++++...+.+...
T Consensus 1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~-~ei~~~i~~l~~~~~~~~~~~~~ 79 (432)
T cd07078 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEAL-GEVARAADTFRYYAGLARRLHGE 79 (432)
T ss_pred CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc
Confidence 36899999999999999999999999999999999999999999999999988775 69999999999999888877654
Q ss_pred cccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhh-cCCCcE
Q 011107 100 EKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSI 178 (493)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~a-lP~g~v 178 (493)
.... ...+...+.+++|+|||++|+|||||+...++.+++||++||+||+|||+.+|.++..+.++|.++ +|++++
T Consensus 80 ~~~~---~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~ 156 (432)
T cd07078 80 VIPS---PDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVL 156 (432)
T ss_pred cccc---cCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcE
Confidence 3211 123456788999999999999999999999999999999999999999999999999999999999 899999
Q ss_pred EEEeCCh-HhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHHHHhhcccCC
Q 011107 179 RVVEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNN 256 (493)
Q Consensus 179 ~vv~g~~-~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~~~~~~~~ 256 (493)
++++|+. +.+..|+.|+ +|.|.||||..+++.|.+.++++++|+++|+||+||+||++|+|++.|++.+++++| .++
T Consensus 157 ~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~-~~~ 235 (432)
T cd07078 157 NVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAF-GNA 235 (432)
T ss_pred EEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHH-hcc
Confidence 9999954 4788899985 899999999999999999999999999999999999999999999999999999999 999
Q ss_pred CCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHHh-CCeEEeCCccCC--C
Q 011107 257 GQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDK--N 332 (493)
Q Consensus 257 Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~~~~gg~~~~--~ 332 (493)
||.|+++++||||++++|+|+++|++++++++.|+| ++++++||++++.+++++.++++++.+ ++++++||..+. .
T Consensus 236 Gq~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~ 315 (432)
T cd07078 236 GQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGK 315 (432)
T ss_pred CCCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCC
Confidence 999999999999999999999999999999999988 578999999999999999999998864 679999987654 4
Q ss_pred CceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcccceEEEcCCC
Q 011107 333 KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA 412 (493)
Q Consensus 333 g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~ 412 (493)
|+|++|||+.+++++++++++|+||||++|++|++++|||+++|+.++||+++|||+|.+.++++++++++|+|+||+++
T Consensus 316 g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~ 395 (432)
T cd07078 316 GYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYS 395 (432)
T ss_pred CcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 413 VHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 413 ~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
.+ ..+.+||||+|.||+|+++|++++++|++.|+|.
T Consensus 396 ~~-~~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 396 VG-AEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVT 431 (432)
T ss_pred CC-CCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 76 5788999999999999999999999999999874
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-79 Score=626.77 Aligned_cols=396 Identities=16% Similarity=0.239 Sum_probs=342.9
Q ss_pred HHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhh
Q 011107 17 EAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHW 96 (493)
Q Consensus 17 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~ 96 (493)
+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..++. ++.++++++.....
T Consensus 4 ~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~-------~~~~~~~~~~~~~~ 76 (429)
T cd07121 4 ATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK-------IAKNHLAAEKTPGT 76 (429)
T ss_pred hhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-------HHHHHHHHHhcCcc
Confidence 68999999999999999999999999999999999999999999999999999987763 34455554422111
Q ss_pred cCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHh----hh
Q 011107 97 MTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG----EY 172 (493)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~----~a 172 (493)
. ..............+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++++ ++
T Consensus 77 ~--~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~a 154 (429)
T cd07121 77 E--DLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEA 154 (429)
T ss_pred c--ccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHHc
Confidence 0 00000001112345788999999999999999999999999999999999999999999999999999885 45
Q ss_pred -cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHHHH
Q 011107 173 -MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIM 249 (493)
Q Consensus 173 -lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~ 249 (493)
+|+|++|+++| +.+.++.|++|+ ||.|+||||+++|+.|++. .||+++|+|||||+||++|||+|.|++.+++
T Consensus 155 GlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~----~k~~~lelGGk~p~iV~~dADld~Aa~~i~~ 230 (429)
T cd07121 155 GGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS----GKKAIGAGAGNPPVVVDETADIEKAARDIVQ 230 (429)
T ss_pred CCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC----CCceEeecCCCceEEEecCCCHHHHHHHHHh
Confidence 89999999998 567899999996 9999999999999999874 4999999999999999999999999999999
Q ss_pred hhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhC---CeEEeC
Q 011107 250 GKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVS---GKIVHG 326 (493)
Q Consensus 250 ~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~---~~~~~g 326 (493)
++| +|+||.|++++|||||+++||+|+++|+++ . .+++++++++++.++++++.++ +++++|
T Consensus 231 ~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~-------------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~g 295 (429)
T cd07121 231 GAS-FDNNLPCIAEKEVIAVDSVADYLIAAMQRN-G-------------AYVLNDEQAEQLLEVVLLTNKGATPNKKWVG 295 (429)
T ss_pred ccc-ccCCCCCCccceEEEeHHHHHHHHHHHHHC-C-------------CEEcCHHHHHHHHHhhcccCCCccccccccC
Confidence 999 999999999999999999999999999886 1 1478999999999999988653 688888
Q ss_pred Ccc----CCCCceee---ceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCc--EEEEecCCHHHHHHH
Q 011107 327 GER----DKNKLRIA---PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL--AAYLFTNNKKLKQQF 397 (493)
Q Consensus 327 g~~----~~~g~~~~---Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl--~a~v~t~d~~~~~~~ 397 (493)
|.. +..|+|+. |||+.+++++|++++||+||||++|++|+|+||||+++|+++||| +++|||+|.++++++
T Consensus 296 g~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~ 375 (429)
T cd07121 296 KDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKM 375 (429)
T ss_pred cCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHH
Confidence 753 12477877 599999999999999999999999999999999999999999998 999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCC--CCcchHHHHHHhhhccEE
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGM--GAYHGKFSFDVFSHKKAV 448 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~--G~~~g~~~~~~~t~~k~v 448 (493)
++++++|+||||+++. +.+||||+|.|++ |..-| +|+ +..|++
T Consensus 376 a~~l~aG~v~iN~~~~----~~~p~gG~k~s~~~~~~~~~-~~~---~~~~~~ 420 (429)
T cd07121 376 ARAMQTTIFVKNGPSY----AGLGVGGEGYTTFTIAGPTG-EGL---TSARTF 420 (429)
T ss_pred HhhCCceEEEEcCCCc----CccccCCCccceEEecCCcC-cCc---cChhhh
Confidence 9999999999997642 5689999999998 54444 443 455544
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-77 Score=616.27 Aligned_cols=406 Identities=15% Similarity=0.166 Sum_probs=340.3
Q ss_pred HHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhcC
Q 011107 19 ASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMT 98 (493)
Q Consensus 19 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 98 (493)
+++++++|++||+.|+.+|+++|.++|++++++|++++++|+++++.|+|||+.+++. ++........ .........
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~-~~~~~~~~~~--~~~~~~~~~ 77 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKV-IKNHFAAEYI--YNVYKDEKT 77 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHH-HHHHHHHHHH--HHHHhcccc
Confidence 4789999999999999999999999999999999999999999999999999998863 5544332111 111111111
Q ss_pred CcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHh----hh-c
Q 011107 99 PEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG----EY-M 173 (493)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~----~a-l 173 (493)
.+..+ ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++. ++ +
T Consensus 78 ~~~~~---~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~ 154 (439)
T cd07081 78 CGVLT---GDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGA 154 (439)
T ss_pred Cceec---CCCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCC
Confidence 11111 1113345789999999999999999999999999999999999999999999999999998886 45 9
Q ss_pred CCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHHHHhh
Q 011107 174 DLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK 251 (493)
Q Consensus 174 P~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~~~ 251 (493)
|+|+||+++| +.+.++.|+.|+ |++|+||||++ +++.+++++||+++|+|||+|+||++|||+|.|++.+++++
T Consensus 155 P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~ 230 (439)
T cd07081 155 PENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSK 230 (439)
T ss_pred ChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHhcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHH
Confidence 9999999998 667899999996 99999999987 56677788999999999999999999999999999999999
Q ss_pred cccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCeEEeCCcc--
Q 011107 252 WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-- 329 (493)
Q Consensus 252 ~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~-- 329 (493)
| +|+||.|++.+|||||+++||+|+++|.++. ||+++..+++++.++|+++...|..+.||..
T Consensus 231 ~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~--------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~ 295 (439)
T cd07081 231 T-FDNGVICASEQSVIVVDSVYDEVMRLFEGQG--------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDAYK 295 (439)
T ss_pred h-cCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC--------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCHHH
Confidence 9 9999999999999999999999999998863 7999999999999999988664434455532
Q ss_pred --CCCCceeece---EecCCC--CCCcccccccccceeeeEeeCCHHHHHHHHhcC----CCCcEEEEecCC---HHHHH
Q 011107 330 --DKNKLRIAPT---LLLDVP--RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG----TKPLAAYLFTNN---KKLKQ 395 (493)
Q Consensus 330 --~~~g~~~~Pt---vl~~v~--~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~----~~gl~a~v~t~d---~~~~~ 395 (493)
...|+|++|| ++.+++ ++|++++||+||||++|++|+|+||||+++|++ +|||+++|||+| .++++
T Consensus 296 ~~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~ 375 (439)
T cd07081 296 IAAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMN 375 (439)
T ss_pred HHHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHH
Confidence 1248899998 998888 999999999999999999999999999999965 799999999999 99999
Q ss_pred HHHhhcccceEEEcCCC-cccCCCCCCccCCCCC--CCCCcchHH-----HHHHhhhccEEe
Q 011107 396 QFVETVSAGGLVINDTA-VHLAVHSLPFGGVQES--GMGAYHGKF-----SFDVFSHKKAVL 449 (493)
Q Consensus 396 ~~~~~l~~g~v~iN~~~-~~~~~~~~p~gG~~~S--G~G~~~g~~-----~~~~~t~~k~v~ 449 (493)
++++++++|.|+||.++ .....-..-|||++.+ |.|.++|.. +.++|++.|.|.
T Consensus 376 ~~a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (439)
T cd07081 376 QFANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVA 437 (439)
T ss_pred HHHhhCCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeee
Confidence 99999999999999765 3323333456677654 555554433 456677766654
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-77 Score=620.14 Aligned_cols=437 Identities=16% Similarity=0.207 Sum_probs=363.5
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhH----HHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSI----YEV 79 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~----~ev 79 (493)
.++++.+++.++. ++++++|++||+.|+.++..+|.++|++++++|+++.++|+++++.|+|||..+++. .++
T Consensus 74 t~~~~~~~~~~~~---~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~gkp~~~ 150 (551)
T TIGR02288 74 GVELGVTYPQCDG---DALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQAGGPHAQ 150 (551)
T ss_pred CCCEEEEEcCCCH---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhccChHHH
Confidence 3678888998885 899999999999999999999999999999999999999999999999999987731 167
Q ss_pred HHHHHHHHHHHHHHHhhcCCcccccccc-c--CCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCC
Q 011107 80 ALLKTSIKSALKELKHWMTPEKAKTSIT-T--FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSE 156 (493)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~ 156 (493)
...++.+++++....++........+.. . .....+..++|+|||++|+|||||+++.++++++||++||+||+|||+
T Consensus 151 ~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VVlKPs~ 230 (551)
T TIGR02288 151 DRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPHP 230 (551)
T ss_pred HHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEEEECCc
Confidence 7889999998887766543211000000 0 011223478999999999999999999999999999999999999999
Q ss_pred CchHHHH----HHHHHHhhh-cCCCcEEEEeC--ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCC
Q 011107 157 VAPASSS----LLAKLVGEY-MDLSSIRVVEG--AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGG 228 (493)
Q Consensus 157 ~~~~~~~----~l~~~l~~a-lP~g~v~vv~g--~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG 228 (493)
.+|+++. .+.+++.++ +|+|+||+++| +.+.++.|+.|+ |+.|.||||+++|+.|.+.++ .+++++|+||
T Consensus 231 ~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa--~~~v~lElGG 308 (551)
T TIGR02288 231 GAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR--QAQVYTEKAG 308 (551)
T ss_pred ccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--cCcEEeecCC
Confidence 9999755 567889998 99999999998 356789999996 999999999999999998876 4899999999
Q ss_pred CCeEEEcCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCc---------chHHHHHHHHHHHHhhcCCCCC-CCCcc
Q 011107 229 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD---------YAPKLLESLKNELENFYGKNPL-ESKDL 298 (493)
Q Consensus 229 ~~p~iV~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~---------i~d~f~~~l~~~~~~~~~g~~~-~~~~~ 298 (493)
|||+||++|||+|.|++.+++++| .|+||.|++++|||||++ +||+|+++|+++++++ .|||. +.+++
T Consensus 309 knp~IV~~dADld~aa~~i~~~~f-~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~~~~~~ 386 (551)
T TIGR02288 309 VNTVIIESTDDYKAMLRNLAFSLS-LYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPARATAVL 386 (551)
T ss_pred cCeEEEcCCCCHHHHHHHHHHHHH-hhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCcccccccc
Confidence 999999999999999999999999 999999999999999999 7999999999999999 78884 67899
Q ss_pred cccCCHHHHHHHHHHHHHHHhCCeEEeCCccC---C-CC-ceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHH
Q 011107 299 SRIVNSNHFARLSKLLDDDKVSGKIVHGGERD---K-NK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFD 373 (493)
Q Consensus 299 gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~---~-~g-~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~ 373 (493)
||++++.+++++. ++.+.|++++||... . .| +|++|||+....++|++++||+||||++|++|+|.||||+
T Consensus 387 Gplis~~~~~ri~----~a~~~G~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~deAi~ 462 (551)
T TIGR02288 387 GAIQSPDTLARIA----EARALGEVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDGAHAVE 462 (551)
T ss_pred cCcCCHHHHHHHH----HHHhCCCEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCHHHHHH
Confidence 9999999999964 444455777877542 1 34 5889999953335999999999999999999999999999
Q ss_pred HHhcC--CCC-cEEEEecCCHHHHHHHHhhc--ccceEEEcCCCcccCCCCCCccCCCCCCCCCcc-hHHHHHHhhhccE
Q 011107 374 IINSG--TKP-LAAYLFTNNKKLKQQFVETV--SAGGLVINDTAVHLAVHSLPFGGVQESGMGAYH-GKFSFDVFSHKKA 447 (493)
Q Consensus 374 ~~n~~--~~g-l~a~v~t~d~~~~~~~~~~l--~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~-g~~~~~~~t~~k~ 447 (493)
++|++ +|| |+++|||+|.+++.++.+++ ..|.++||.......+...||++.+.||...-. ..+.-..|...|.
T Consensus 463 ~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~~~~~~~~~sg~n~~a~~~~~~~~~~~~r~ 542 (551)
T TIGR02288 463 LARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQSAAFSDFHGTGGNPAANASLSDGAFVANRF 542 (551)
T ss_pred HHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccCCCCCCCCCCCCCCccCCcccchhhhhcce
Confidence 99998 566 99999999999999999998 344444554333333445678899989886543 3445555666655
Q ss_pred EeEe
Q 011107 448 VLSR 451 (493)
Q Consensus 448 v~~~ 451 (493)
.+.+
T Consensus 543 ~~~~ 546 (551)
T TIGR02288 543 RVVQ 546 (551)
T ss_pred EEEE
Confidence 4444
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-77 Score=619.56 Aligned_cols=403 Identities=16% Similarity=0.230 Sum_probs=347.5
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHH
Q 011107 13 VFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKE 92 (493)
Q Consensus 13 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~ 92 (493)
....+|+++++++|++||..|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++. ..++++++.
T Consensus 32 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~~~ 104 (465)
T PRK15398 32 MGVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAAEK 104 (465)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHHHH
Confidence 4467899999999999999999999999999999999999999999999999999999988753 234444443
Q ss_pred HHh--hcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHh
Q 011107 93 LKH--WMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 170 (493)
Q Consensus 93 ~~~--~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~ 170 (493)
... +..... ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus 105 ~~~~~~~~~~~----~~~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~ 180 (465)
T PRK15398 105 TPGVEDLTTEA----LTGDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLN 180 (465)
T ss_pred hccccccccCc----ccCCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHH
Confidence 321 111110 11123446788999999999999999999999999999999999999999999999999999987
Q ss_pred h----h-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHH
Q 011107 171 E----Y-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 243 (493)
Q Consensus 171 ~----a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~A 243 (493)
+ + +|+|++|++++ +.+.+..|++|+ +|.|+||||+++|+.|++ ..||+++|+|||||+||++|||+|.|
T Consensus 181 ~~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~----~~k~~~~elGGk~p~IV~~dADld~A 256 (465)
T PRK15398 181 EAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGNPPVVVDETADIEKA 256 (465)
T ss_pred HHHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH----cCCceeeecCCCceEEEecCCCHHHH
Confidence 4 5 89999999998 667899999996 999999999999999987 36999999999999999999999999
Q ss_pred HHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHH-hCCe
Q 011107 244 CRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK-VSGK 322 (493)
Q Consensus 244 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~ 322 (493)
++.+++|+| +|+||.|++++|||||+++||+|+++|+++. +|++++.+++++.++++++. ++++
T Consensus 257 a~~i~~g~~-~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~~--------------~~li~~~~~~~v~~~l~~~~~~~~~ 321 (465)
T PRK15398 257 ARDIVKGAS-FDNNLPCIAEKEVIVVDSVADELMRLMEKNG--------------AVLLTAEQAEKLQKVVLKNGGTVNK 321 (465)
T ss_pred HHHHHHhcc-cCCCCcCCCCceEEEeHHHHHHHHHHHHHcC--------------CccCCHHHHHHHHHHHhhcccccch
Confidence 999999999 9999999999999999999999999999861 27999999999999998654 2336
Q ss_pred EEeCCcc----CCCCcee---eceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCc--EEEEecCCHHH
Q 011107 323 IVHGGER----DKNKLRI---APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL--AAYLFTNNKKL 393 (493)
Q Consensus 323 ~~~gg~~----~~~g~~~---~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl--~a~v~t~d~~~ 393 (493)
++.||.. ...|+++ +|||+.+++++|++++||+||||++|++|+|+|||++++|+++||| +++|||+|.++
T Consensus 322 ~~~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~ 401 (465)
T PRK15398 322 KWVGKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDN 401 (465)
T ss_pred hhhCCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHH
Confidence 6776542 1236655 4799999999999999999999999999999999999999999998 99999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++++++|+|+||++.. +.+||||+|.|.+ ..+|+.| ...|..|++..+
T Consensus 402 a~~~a~~l~~G~V~iN~~~~----~~~p~gg~~~s~~-~~~~~~g-~~~~~~~~~~~~ 453 (465)
T PRK15398 402 LNKMARAIQTSIFVKNGPSY----AGLGLGGEGFTTF-TIATPTG-EGVTSARTFTRR 453 (465)
T ss_pred HHHHHHhCCceEEEECCCCc----cccCcCCCCCcee-eecccCC-CCccchhhhhhh
Confidence 99999999999999997642 5789999999985 2236666 666777766554
|
|
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-75 Score=608.93 Aligned_cols=436 Identities=17% Similarity=0.233 Sum_probs=371.2
Q ss_pred hhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhH----HHHH
Q 011107 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSI----YEVA 80 (493)
Q Consensus 5 ~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~----~ev~ 80 (493)
++++++++.+ ++++++++|++|++.|++++.++|.++|++++++|.+++++|+++++.|+||+..++.. .|++
T Consensus 75 ~~l~~~~~~a---dv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~~~a~qa~~~~evd 151 (549)
T cd07127 75 VELGVTYPQC---DPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFMMAFQAGGPHAQD 151 (549)
T ss_pred CcEEEEEchH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCHHHHHhcccHHHHH
Confidence 4556677776 89999999999999999999999999999999999999999999999999999987742 2799
Q ss_pred HHHHHHHHHHHHHHhhcCCcccc-cccc--cCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCC
Q 011107 81 LLKTSIKSALKELKHWMTPEKAK-TSIT--TFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEV 157 (493)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~ 157 (493)
.+++.++|+.+...+........ .... .........++|+||+++|+|||||+++.+.++++||++||+||+|||+.
T Consensus 152 ~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVvKPs~~ 231 (549)
T cd07127 152 RGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKPHPA 231 (549)
T ss_pred HHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEEECCcc
Confidence 99999999988877653321100 0000 00112245789999999999999999999999999999999999999999
Q ss_pred chHHHH----HHHHHHhhh-cCCCcEEEEeCC--hHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCC
Q 011107 158 APASSS----LLAKLVGEY-MDLSSIRVVEGA--VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGK 229 (493)
Q Consensus 158 ~~~~~~----~l~~~l~~a-lP~g~v~vv~g~--~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~ 229 (493)
+|+++. .+.++|.++ +|+|+||+++++ .+.+..|+.|+ ++.|.||||+.+|+.|.+.++. +|+++|+|||
T Consensus 232 a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~~--~~v~~ElGGk 309 (549)
T cd07127 232 AILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANARQ--AQVYTEKAGV 309 (549)
T ss_pred cchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhcc--CcEEEecCCc
Confidence 998864 456888888 999999999983 46789999996 9999999999999999998874 8999999999
Q ss_pred CeEEEcCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCc---------chHHHHHHHHHHHHhhcCCCCC-CCCccc
Q 011107 230 SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD---------YAPKLLESLKNELENFYGKNPL-ESKDLS 299 (493)
Q Consensus 230 ~p~iV~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~---------i~d~f~~~l~~~~~~~~~g~~~-~~~~~g 299 (493)
||+||++|+|++.+++.+++|+| .|+||.|++++|||||++ +||+|+++|+++++++ .|||. ..+++|
T Consensus 310 n~~IV~~dADl~~aa~~i~~~~f-~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l-~Gdp~~~~~~~G 387 (549)
T cd07127 310 NTVVVDSTDDLKAMLRNLAFSLS-LYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-LADPARAAALLG 387 (549)
T ss_pred CeEEECCCCCHHHHHHHHHHHHH-ccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh-cCCccccccccC
Confidence 99999999999999999999999 999999999999999999 8999999999999999 77874 678999
Q ss_pred ccCCHHHHHHHHHHHHHHHhCCeEEeCCccCC----CC-ceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHH
Q 011107 300 RIVNSNHFARLSKLLDDDKVSGKIVHGGERDK----NK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDI 374 (493)
Q Consensus 300 pl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~----~g-~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~ 374 (493)
|++++.+++++.+.+ +.|++++||.... .| +|++|||+...+++|++++||+||||++|++|+|.+|++++
T Consensus 388 pli~~~~~~ri~~a~----~~g~vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~~eai~~ 463 (549)
T cd07127 388 AIQSPDTLARIAEAR----QLGEVLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIEL 463 (549)
T ss_pred CcCCHHHHHHHHHHH----hCCCEEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCHHHHHHH
Confidence 999999999986544 4456888886531 24 46699999988899999999999999999999999999999
Q ss_pred HhcCC--C-CcEEEEecCCHHHHHHHHhhc-ccc-eEEEcCCCcccCCCCCCccCCCCCCCCCcc-hHHHHHHhhhccEE
Q 011107 375 INSGT--K-PLAAYLFTNNKKLKQQFVETV-SAG-GLVINDTAVHLAVHSLPFGGVQESGMGAYH-GKFSFDVFSHKKAV 448 (493)
Q Consensus 375 ~n~~~--~-gl~a~v~t~d~~~~~~~~~~l-~~g-~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~-g~~~~~~~t~~k~v 448 (493)
+|++. + ||+++|||+|.+.++++.+++ .+| .++||.+.....+..+||||.+.||...-. .......|...|..
T Consensus 464 an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~~a~~~~~~~~fv~~r~~ 543 (549)
T cd07127 464 ARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANPAANAALTDGAFVANRFR 543 (549)
T ss_pred HHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCcccccccchhhhhhcceE
Confidence 99974 4 599999999999999999984 555 899997655455566779999999997654 44566666666655
Q ss_pred eEe
Q 011107 449 LSR 451 (493)
Q Consensus 449 ~~~ 451 (493)
+.+
T Consensus 544 ~~~ 546 (549)
T cd07127 544 VVQ 546 (549)
T ss_pred EEE
Confidence 443
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-75 Score=594.95 Aligned_cols=386 Identities=17% Similarity=0.205 Sum_probs=329.7
Q ss_pred HHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCc----hhhhH-------HHHHHHHHH
Q 011107 17 EAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE----LESSI-------YEVALLKTS 85 (493)
Q Consensus 17 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~-------~ev~~~~~~ 85 (493)
+|+++++++|++||..|+.+|.++|.++|++++++|++++++|++++++|+||+. .++.. .|+..+++.
T Consensus 4 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~ 83 (417)
T PRK00197 4 EYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEG 83 (417)
T ss_pred hHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999998887764 34432 477777777
Q ss_pred HHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHH
Q 011107 86 IKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLL 165 (493)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l 165 (493)
+++++...+.. . +..+......+...+++++|+|||++|+||| | ..+++++++||++||+||+|||+.+|.++.++
T Consensus 84 ~~~~a~~~~~~-g-~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l 159 (417)
T PRK00197 84 LRQVAALPDPV-G-EVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRAL 159 (417)
T ss_pred HHHHhhcCCCc-c-ccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHH
Confidence 77776544321 1 1111100011224688999999999999986 4 77889999999999999999999999999999
Q ss_pred HHHH----hhh-cCCCcEEEEeC-ChH-hHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCC
Q 011107 166 AKLV----GEY-MDLSSIRVVEG-AVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 166 ~~~l----~~a-lP~g~v~vv~g-~~~-~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~d 237 (493)
++++ .++ +|+|++|+|+| +.+ .+..|..|+ +|+|+||||+++|+.+++.+ +||+++|+|||||+||++|
T Consensus 160 ~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a---~~~~~lELGGk~p~IV~~d 236 (417)
T PRK00197 160 VAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA---TVPVIEHGDGICHIYVDES 236 (417)
T ss_pred HHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCC
Confidence 8886 466 99999999996 544 566677785 99999999999999998864 5999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
||+|.|++.+++++| +|+| .|++++|+|||+++||+|+++|+++++++..+
T Consensus 237 Adl~~Aa~~iv~~~~-~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~--------------------------- 287 (417)
T PRK00197 237 ADLDKALKIVLNAKT-QRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE--------------------------- 287 (417)
T ss_pred CCHHHHHHHHHHhcc-CCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe---------------------------
Confidence 999999999999999 9999 99999999999999999999999999876431
Q ss_pred HhCCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 318 KVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 318 ~~~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
++ ||... .+ |+ |||+ +++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++
T Consensus 288 -----~~-~~~~~-~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~ 355 (417)
T PRK00197 288 -----LR-GDEAA-LA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAERF 355 (417)
T ss_pred -----Ee-cCHHH-HH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHH
Confidence 11 11110 12 33 9998 56899999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCCC----CcchHHHHHHhhhccEEeEec
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG----AYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G----~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++|+|+||+++.+ .+..||||.+.||+| +++|.+++++||+.|+++++.
T Consensus 356 ~~~l~~G~v~VN~~~~~--~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~~ 412 (417)
T PRK00197 356 LNEVDSAAVYVNASTRF--TDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLGD 412 (417)
T ss_pred HHhCCeeEEEEeCCCcc--CCCCccccchhheeecCCCcCCCccchHhhcEEEEEEECC
Confidence 99999999999987643 456899999999999 999999999999999998754
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-74 Score=591.56 Aligned_cols=381 Identities=19% Similarity=0.241 Sum_probs=325.3
Q ss_pred HHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCch----hhhH-------HHHHHHHHHHHHH
Q 011107 21 LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPEL----ESSI-------YEVALLKTSIKSA 89 (493)
Q Consensus 21 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~~-------~ev~~~~~~~~~~ 89 (493)
+.+++|++||..|+.+|.++|.++|++++++|++++++|+++++.|+||+.. ++.. .|+..+++.++++
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999777666643 3321 3777888888777
Q ss_pred HHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHH
Q 011107 90 LKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV 169 (493)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l 169 (493)
+...+. .. ...+......+...+++++|+|||++|+|| +| ..+++++++||++||+||+|||+.+|.++..+++++
T Consensus 82 a~~~~~-~g-~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~ 157 (406)
T cd07079 82 AALPDP-VG-EVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEII 157 (406)
T ss_pred HhcCCC-Cc-ccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHH
Confidence 654321 11 111110001123457889999999999996 56 778899999999999999999999999999999998
Q ss_pred h----hh-cCCCcEEEEeC-Ch-HhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 170 G----EY-MDLSSIRVVEG-AV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 170 ~----~a-lP~g~v~vv~g-~~-~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
. ++ +|+|++|+++| +. ..+..|+.|+ +|+|+||||+++|+.|++.+ +||+++|+|||||+||++|||+|
T Consensus 158 ~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a---~~pv~lELGGk~p~IV~~dADl~ 234 (406)
T cd07079 158 QEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA---TIPVIKHGDGNCHVYVDESADLE 234 (406)
T ss_pred HHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCCCHH
Confidence 7 56 99999999998 44 4577778886 99999999999999998766 69999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCC
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG 321 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~ 321 (493)
.|++.+++++| .|+| .|++++|||||+++||+|+++|+++++++ ++
T Consensus 235 ~Aa~~i~~~~f-~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~~--------------------------------ga 280 (406)
T cd07079 235 MAVRIVVNAKT-QRPS-VCNALETLLVHRDIAEEFLPKLAEALREA--------------------------------GV 280 (406)
T ss_pred HHHHHHHHccc-CCCc-ccccceeEEEeHHHHHHHHHHHHHHHHHC--------------------------------CC
Confidence 99999999999 9999 99999999999999999999999987642 24
Q ss_pred eEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc
Q 011107 322 KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV 401 (493)
Q Consensus 322 ~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 401 (493)
+++ ||... ..|++|| ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++
T Consensus 281 ~~~-~g~~~--~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~ 353 (406)
T cd07079 281 ELR-GDEET--LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFLREV 353 (406)
T ss_pred EEe-cCHHH--HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHHHhC
Confidence 443 33221 1377888 7899999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEcCCCcccCCCCCCccCCCCCCC----CCcchHHHHHHhhhccEEeEe
Q 011107 402 SAGGLVINDTAVHLAVHSLPFGGVQESGM----GAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 402 ~~g~v~iN~~~~~~~~~~~p~gG~~~SG~----G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++|.|+||+++.. .+..||||.+.||. |+++|.+++++||+.|+|.+.
T Consensus 354 ~~G~v~iN~~~~~--~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~~ 405 (406)
T cd07079 354 DSAAVYVNASTRF--TDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVRG 405 (406)
T ss_pred CeeEEEEeCCCcc--cCCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEeC
Confidence 9999999987643 35689999999998 999999999999999998764
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-73 Score=591.29 Aligned_cols=413 Identities=17% Similarity=0.179 Sum_probs=352.9
Q ss_pred CCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHH
Q 011107 12 EVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALK 91 (493)
Q Consensus 12 ~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~ 91 (493)
+..+.+++++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++..+.......+.+++.
T Consensus 3 ~~~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~ 82 (488)
T TIGR02518 3 DLYSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIK 82 (488)
T ss_pred cccCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHh
Confidence 56788999999999999999999999999999999999999999999999999999999888754333344455554443
Q ss_pred HHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHH--
Q 011107 92 ELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV-- 169 (493)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l-- 169 (493)
..+. .. . . ....+...+.+++|+|||++|+|||||+.++.+++++||++||+||+|||+.+|.++..+++++
T Consensus 83 ~~~~-~G-~-~---~~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~ 156 (488)
T TIGR02518 83 DMKT-IG-I-L---SEDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRK 156 (488)
T ss_pred hCcc-cc-e-e---cCCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHH
Confidence 2211 11 1 1 1112345678899999999999999999999999999999999999999999999999865554
Q ss_pred --hhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHH
Q 011107 170 --GEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVAC 244 (493)
Q Consensus 170 --~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa 244 (493)
.++ +|+|+||++++ +.+.+.+|++|+ ||+|+||||+..+ +.++.++||+++|+|||+|+||++|||+|.|+
T Consensus 157 ~l~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~----~~a~~~~~pv~~e~gGn~p~iV~~dADld~Aa 232 (488)
T TIGR02518 157 AAEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMV----KAAYSSGTPAIGVGPGNGPAYIERTANVKKAV 232 (488)
T ss_pred HHHHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHH----HHHHHcCCCEEEEcCCCCeEEEeCCCCHHHHH
Confidence 677 99999999998 678899999995 9999999999865 44455789999999999999999999999999
Q ss_pred HHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHH-------HHhhcCCCC-C-CCCcccccCCHHHHHHHHHHHH
Q 011107 245 RRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNE-------LENFYGKNP-L-ESKDLSRIVNSNHFARLSKLLD 315 (493)
Q Consensus 245 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~-------~~~~~~g~~-~-~~~~~gpl~~~~~~~~~~~~i~ 315 (493)
+.+++|+| +|+||.|++.+|||||+++||+|+++|+++ .+.++.|+| . +++++||+++.++++++.++++
T Consensus 233 ~~iv~sk~-~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~ 311 (488)
T TIGR02518 233 RDIIDSKT-FDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAG 311 (488)
T ss_pred HHHHHHHh-cCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhc
Confidence 99999999 999999999999999999999999999998 778888885 3 6789999999999999999999
Q ss_pred HHHh-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhc----CCCCcEEEEecCC
Q 011107 316 DDKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS----GTKPLAAYLFTNN 390 (493)
Q Consensus 316 ~a~~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~----~~~gl~a~v~t~d 390 (493)
++.. ++++++||.. .++++|++ .+|+||||++|++|+|+||||+++|+ ++|||+++|||+|
T Consensus 312 ~av~~gakll~gg~~-------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d 377 (488)
T TIGR02518 312 LTVPEDAKVLIGEQN-------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSEN 377 (488)
T ss_pred cccCCCCEEEEeCCC-------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCC
Confidence 9865 6799998742 35778886 79999999999999999999999887 6999999999999
Q ss_pred HHHHHHHHhhcccceEEEcCCCcc----c---CCC--CCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 391 KKLKQQFVETVSAGGLVINDTAVH----L---AVH--SLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 391 ~~~~~~~~~~l~~g~v~iN~~~~~----~---~~~--~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
.+++++|++++++|+|+||++..+ . ..+ .+.||+++.+++. .+-++++++..|.|....
T Consensus 378 ~~~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~---~~v~~~~l~~~k~v~~~~ 445 (488)
T TIGR02518 378 KDIVREFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS---DNITPENLINIRRVAYGV 445 (488)
T ss_pred HHHHHHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC---CCCCHHHhheeeEEEecc
Confidence 999999999999999999964321 1 112 2336677666665 388999999999987654
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-74 Score=587.53 Aligned_cols=369 Identities=15% Similarity=0.184 Sum_probs=317.9
Q ss_pred HHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHH-HHHHHHHHHHhhc
Q 011107 19 ASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT-SIKSALKELKHWM 97 (493)
Q Consensus 19 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~-~~~~~~~~~~~~~ 97 (493)
+++++++|++||..|+++|.++|.++|++++++|++++++|++++++|+|||+.+++..|+..+++ .++++... ...
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~ 78 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTV 78 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cce
Confidence 478999999999999999999999999999999999999999999999999999987547777666 56665531 111
Q ss_pred CCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHh----hh-
Q 011107 98 TPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG----EY- 172 (493)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~----~a- 172 (493)
. . .. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++. ++
T Consensus 79 g-~-~~---~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG 153 (436)
T cd07122 79 G-V-IE---EDEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAG 153 (436)
T ss_pred e-e-ec---cCCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcC
Confidence 0 0 11 1113356789999999999999999999999999999999999999999999999999888875 56
Q ss_pred cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHHHHh
Q 011107 173 MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMG 250 (493)
Q Consensus 173 lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~~ 250 (493)
+|+|++|+++| +.+.+..|++|+ |+.|.||||+++++ .++++++|+++|+|||||+||++|||+|.|++.+++|
T Consensus 154 ~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~----~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~ 229 (436)
T cd07122 154 APEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK----AAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILS 229 (436)
T ss_pred CCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHH----HHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHH
Confidence 99999999998 667889999996 99999999998654 4567789999999999999999999999999999999
Q ss_pred hcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhh-------cCCCC--CCCCcccccCCHHHHHHHHHHHHHHHh-C
Q 011107 251 KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF-------YGKNP--LESKDLSRIVNSNHFARLSKLLDDDKV-S 320 (493)
Q Consensus 251 ~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~-------~~g~~--~~~~~~gpl~~~~~~~~~~~~i~~a~~-~ 320 (493)
+| +|+||.|++++|||||+++||+|+++|+++...+ +.+++ ++++++||+++..+++++..++..+.. +
T Consensus 230 ~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~g 308 (436)
T cd07122 230 KT-FDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPED 308 (436)
T ss_pred hh-ccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCC
Confidence 99 9999999999999999999999999999988765 55555 346678888888877777666554332 2
Q ss_pred CeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcC----CCCcEEEEecCCHHHHHH
Q 011107 321 GKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG----TKPLAAYLFTNNKKLKQQ 396 (493)
Q Consensus 321 ~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~----~~gl~a~v~t~d~~~~~~ 396 (493)
+++++|+ +++++++|+++ +|.||||++|++|+|+||||+++|++ +|||+++|||+|.+++++
T Consensus 309 a~vl~~~-------------~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~ 374 (436)
T cd07122 309 TKVLVAE-------------ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEE 374 (436)
T ss_pred CeEEEEe-------------cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHH
Confidence 3444333 57889999987 56799999999999999999999997 899999999999999999
Q ss_pred HHhhcccceEEEcCCCc
Q 011107 397 FVETVSAGGLVINDTAV 413 (493)
Q Consensus 397 ~~~~l~~g~v~iN~~~~ 413 (493)
+++++++|+||||+++.
T Consensus 375 ~~~~l~aG~V~IN~~~~ 391 (436)
T cd07122 375 FALRMPVSRILVNTPSS 391 (436)
T ss_pred HHhhCCceEEEEeCCcc
Confidence 99999999999998764
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-73 Score=612.81 Aligned_cols=383 Identities=21% Similarity=0.215 Sum_probs=334.0
Q ss_pred HHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHH------HhhcC--CCchhhh---HHHHHHHHHHH
Q 011107 18 AASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDAL------RQDLD--KPELESS---IYEVALLKTSI 86 (493)
Q Consensus 18 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~------~~e~G--k~~~~a~---~~ev~~~~~~~ 86 (493)
++++++++|++||+.|+++|.++|.++|++++++|+++.++|++++ ++|+| ||+.++. ..|+..+++.+
T Consensus 295 ~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~~ 374 (718)
T PLN02418 295 GAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAASI 374 (718)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHHH
Confidence 4999999999999999999999999999999999999999999996 77999 8877753 35999999999
Q ss_pred HHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHH
Q 011107 87 KSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLA 166 (493)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~ 166 (493)
++++.. ..... +..+......+...++.++|+|||++|+||| |+.+. +++++||++||+||+|||+.+|.++..++
T Consensus 375 ~~~a~~-~~~~g-~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~ 450 (718)
T PLN02418 375 RQLADM-EDPIG-RVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILH 450 (718)
T ss_pred HHHhcC-ccccC-ccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHH
Confidence 999876 33322 1111000111223578899999999999999 99999 99999999999999999999999999999
Q ss_pred HHHhhhcCCCc----EEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 167 KLVGEYMDLSS----IRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 167 ~~l~~alP~g~----v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
+++.+++|+|+ +|+|+|+.+.+..|+.|+ |++|+||||++. +.+.++.++||+++|+|||||+||++|||+|
T Consensus 451 ~l~~eAlP~gv~~~v~nvv~g~~~~g~~L~~~~~v~~V~FTGSt~~---i~~~aa~~~k~v~lELGGk~p~iV~~DADld 527 (718)
T PLN02418 451 KVITDAIPKTVGGKLIGLVTSRDEIPDLLKLDDVIDLVIPRGSNKL---VSQIKASTKIPVLGHADGICHVYVDKSADMD 527 (718)
T ss_pred HHHHHHccccCCcceEEEeCCcHHHHHHHhhCCCCCEEEEeCCHHH---HHHHHHhcCCCEEEeCCCcceEEEeCCCCHH
Confidence 99999999996 999998667788999995 999999999964 5555666789999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHh-C
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV-S 320 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~ 320 (493)
.|++.+++++| .| ||.|++.+|+|||+++||+ | .+.++|+++++ |
T Consensus 528 ~A~~~i~~~~~-~n-GQ~C~a~~RllVh~~i~d~-----------------------G---------~~~~~i~~a~~~G 573 (718)
T PLN02418 528 MAKRIVVDAKT-DY-PAACNAMETLLVHKDLVQN-----------------------G---------GLNDLLVALRSAG 573 (718)
T ss_pred HHHHHHHHHhC-CC-CCccccCcEEEEecccccc-----------------------c---------cHHHHHHHHHHCC
Confidence 99999999999 88 9999999999999999997 1 24788888866 5
Q ss_pred CeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhh
Q 011107 321 GKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 400 (493)
Q Consensus 321 ~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 400 (493)
+++ +||.... | ++. + ++|++++||+||||++|.+|+|+||||+++|+++|||+++|||+|.+++.+++++
T Consensus 574 a~l-~Gg~~~~-g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~a~~ 643 (718)
T PLN02418 574 VTL-YGGPRAS-K------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIFLRQ 643 (718)
T ss_pred CEE-ECCcccc-C------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHHHHh
Confidence 677 7885432 3 243 4 8899999999999999999999999999999999999999999999999999999
Q ss_pred cccceEEEcCCCcccCCCCCCccCCCCCCC--CCcc--hHHHHHHhhhccEEeEecC
Q 011107 401 VSAGGLVINDTAVHLAVHSLPFGGVQESGM--GAYH--GKFSFDVFSHKKAVLSRGF 453 (493)
Q Consensus 401 l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~--G~~~--g~~~~~~~t~~k~v~~~~~ 453 (493)
+++|.||||+++.+ .+..||||+|.||+ |+++ |++|+++||+.|+|++...
T Consensus 644 l~aG~V~IN~~~~~--~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~g 698 (718)
T PLN02418 644 VDSAAVFHNASTRF--SDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGNG 698 (718)
T ss_pred CCeeEEEEeCCCCC--CCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECCC
Confidence 99999999987543 45689999999999 9885 9999999999999988763
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-72 Score=626.44 Aligned_cols=416 Identities=18% Similarity=0.197 Sum_probs=360.4
Q ss_pred cccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHH
Q 011107 9 KKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKS 88 (493)
Q Consensus 9 ~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~ 88 (493)
.+++..+.+|+++++++|++||+.|+++|.++|.++|+++++++++++++|++++++|+|||..+++..++..+++.+.+
T Consensus 4 ~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~ 83 (862)
T PRK13805 4 EEMAVTNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYN 83 (862)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999988763233333333322
Q ss_pred HHHHHHhhcCCccccccc-ccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHH
Q 011107 89 ALKELKHWMTPEKAKTSI-TTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAK 167 (493)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~ 167 (493)
+ +......... .......+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++
T Consensus 84 ~-------~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~ 156 (862)
T PRK13805 84 S-------YKDEKTVGVIEEDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAK 156 (862)
T ss_pred H-------hcCCCcccccCcCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHH
Confidence 2 2111111111 1123346788999999999999999999999999999999999999999999999999999
Q ss_pred HHhh----h-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 168 LVGE----Y-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 168 ~l~~----a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
++.+ + +|+|+||+++| +.+.+..|++|+ +|+|+||||++++ +.++++++|+++|+|||||+||++|||+
T Consensus 157 l~~~~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~~~~pv~~e~gGk~p~iV~~dADl 232 (862)
T PRK13805 157 IVLDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAYSSGKPALGVGAGNVPAYIDKTADI 232 (862)
T ss_pred HHHHHHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHHhcCCCeEEECCCCCeEEEeCCCCH
Confidence 8865 4 99999999998 778899999996 9999999999864 4566789999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhC
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVS 320 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 320 (493)
+.|++.|++|+| +|+||.|+++++||||+++||+|+++|+++. +|+++++++++++++++++..+
T Consensus 233 ~~Aa~~i~~~k~-~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~g--------------~~l~~~~~~~~v~~~i~~a~~~ 297 (862)
T PRK13805 233 KRAVNDILLSKT-FDNGMICASEQAVIVDDEIYDEVKEEFASHG--------------AYFLNKKELKKLEKFIFGKENG 297 (862)
T ss_pred HHHHHHHHHhhh-ccCCCccCCCceEEEehhhHHHHHHHHHHhC--------------CeeCCHHHHHHHHHHHhhccCC
Confidence 999999999999 9999999999999999999999999998862 4899999999999999987554
Q ss_pred C--eEEeCCccC----CCCceeeceE------ecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhc----CCCCcEE
Q 011107 321 G--KIVHGGERD----KNKLRIAPTL------LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS----GTKPLAA 384 (493)
Q Consensus 321 ~--~~~~gg~~~----~~g~~~~Ptv------l~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~----~~~gl~a 384 (493)
+ ..++||... ..|+|++||+ +.+++++|++++ |+||||++|++|+|+||||+++|+ ++|||++
T Consensus 298 ~~~~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~ 376 (862)
T PRK13805 298 ALNADIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTA 376 (862)
T ss_pred CcCccccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEE
Confidence 3 224566421 2478899997 778999999887 799999999999999999999988 5899999
Q ss_pred EEecCCHHHHHHHHhhcccceEEEcCCCcc--------cCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 385 YLFTNNKKLKQQFVETVSAGGLVINDTAVH--------LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 385 ~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--------~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+|||+|.+++++|++++++|+|+||.++.+ ...+++|||| |.||+|+++|+.|+++|++.|+|..+.
T Consensus 377 ~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~~ 451 (862)
T PRK13805 377 VIYTNDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKRR 451 (862)
T ss_pred EEECCCHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeecc
Confidence 999999999999999999999999987522 3678899997 999999999999999999999998765
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-69 Score=530.93 Aligned_cols=427 Identities=21% Similarity=0.323 Sum_probs=389.9
Q ss_pred chhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 3 ~~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
...++|+++..++.+|+++|++.|.+|++.|..+|.++|+.+|++++++++.+..+|..++++|-||+...+. .||..+
T Consensus 136 d~~dvVG~V~ea~~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~L~~REAGKtl~naI-AEVREA 214 (769)
T COG4230 136 DPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVREAGKTLSNAI-AEVREA 214 (769)
T ss_pred CHhHCeeeeeecCHHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHH-HHHHHH
Confidence 3457889999999999999999999999999999999999999999999999999999999999999999995 699999
Q ss_pred HHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHH
Q 011107 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~ 162 (493)
+++|+||+...+.-.. ...++|+|.+++|+|||||+.++...++.||++||+|+-||.++||+.+
T Consensus 215 VDFlrYYA~~ar~~~g---------------~~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIA 279 (769)
T COG4230 215 VDFLRYYAGQARDTFG---------------NLTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIA 279 (769)
T ss_pred HHHHHHHHHHHhcccC---------------ccccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccccCccccccHHH
Confidence 9999999988764211 1347899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeCCh-HhHHHHHhC-CCCeEEEeCCHHHHHHHHHHHhcc---ccchhhhcCCCCeEEEcC
Q 011107 163 SLLAKLVGEY-MDLSSIRVVEGAV-AETSALLDQ-KWDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKSPVVFDS 236 (493)
Q Consensus 163 ~~l~~~l~~a-lP~g~v~vv~g~~-~~~~~L~~~-~v~~v~ftGs~~~g~~i~~~a~~~---~~~~~~elgG~~p~iV~~ 236 (493)
..-+++++++ +|++++|+++|+. .+|..|+.+ +++.|.||||+++++.|.+..+++ ..|++.|.||-|.+||+.
T Consensus 280 a~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~g~~~pLIAETGGqNAMIVDS 359 (769)
T COG4230 280 AQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDS 359 (769)
T ss_pred HHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcCCCCCceEeccCCcceEEeec
Confidence 9999999999 9999999999954 589999998 599999999999999999888763 468899999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 011107 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (493)
Q Consensus 237 daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~ 315 (493)
+|--|.++.+++.|+| ..+||.|++.+.++++++++|..++.|+-.+..++.|+|+ -.+|+||+|+.++.+.++++|+
T Consensus 360 sAL~EQVv~Dvl~SAF-dSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~ 438 (769)
T COG4230 360 SALAEQVVADVLASAF-DSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQ 438 (769)
T ss_pred hhhHHHHHHHHHHHHh-hcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceeccccccccHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999999999999999997 6899999999999999999999
Q ss_pred HHHhCCeEEeCCccC---CCCceeeceEecCCCCCCcccccccccceeeeEeeC--CHHHHHHHHhcCCCCcEEEEecCC
Q 011107 316 DDKVSGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTNN 390 (493)
Q Consensus 316 ~a~~~~~~~~gg~~~---~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d 390 (493)
..+..|+.++--..+ ..|.|+.||++.--. -.-++.|+|||||-|++|+ ++++.|+-+|.++|||+.+|||+-
T Consensus 439 ~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El~~--~~eL~rEVFGPVLHVvRy~~~~l~~vi~~INatGyGLT~GvHtRi 516 (769)
T COG4230 439 TMRSKGRLVHQAAAPNSLQKGTFVAPTLIELEN--LDELQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRI 516 (769)
T ss_pred HHHhcccchhhccCCCccCCceeeCceeEEcCC--HHHHHHHhccceeEEEEecHHHHHHHHHHHhccCcceeeeeecch
Confidence 887777655543322 369999999995322 2236889999999999996 799999999999999999999999
Q ss_pred HHHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCc-chHHHHHHhhhccEE
Q 011107 391 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAY-HGKFSFDVFSHKKAV 448 (493)
Q Consensus 391 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~-~g~~~~~~~t~~k~v 448 (493)
.+.+.++.+++++|.+|||...++......||||.+.||+|.. +|+..+..|...+..
T Consensus 517 deti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL~Rl~~~~p~ 575 (769)
T COG4230 517 DETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLRLVSERPW 575 (769)
T ss_pred HHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCChHHHHHHHhcCCc
Confidence 9999999999999999999988888888899999999999975 789999999877764
|
|
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-69 Score=553.25 Aligned_cols=373 Identities=18% Similarity=0.159 Sum_probs=327.9
Q ss_pred HHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhh----------HHHHHHHHHHHHHHHHHH
Q 011107 24 KELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESS----------IYEVALLKTSIKSALKEL 93 (493)
Q Consensus 24 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~----------~~ev~~~~~~~~~~~~~~ 93 (493)
++|++||+.|+++|.++|.++|++++++|++++++|+++++.|+|||+.+.. ..|+..+++.+++++...
T Consensus 1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~ 80 (397)
T cd07077 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASV 80 (397)
T ss_pred ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence 3689999999999999999999999999999999999999999999865432 137778888888777543
Q ss_pred HhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhh-
Q 011107 94 KHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY- 172 (493)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~a- 172 (493)
.+.... .. . .....+++++|+|||++|+|||||+. +++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus 81 ~~~~~~-~~----~-~~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~ 153 (397)
T cd07077 81 GHIQDV-LL----P-DNGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAAD 153 (397)
T ss_pred Ccccce-Ee----c-CCCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHh
Confidence 332211 11 1 12356889999999999999999999 9999999999999999999999999999999998874
Q ss_pred ---cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHH
Q 011107 173 ---MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRM 247 (493)
Q Consensus 173 ---lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i 247 (493)
+|+++++++++ +.+.+..|+.|+ +|.|+||||+++++.+.+.+. ++|+++|+||++|+||++|||++.|++.+
T Consensus 154 ~~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~--~~~~~~~~gg~~~~iv~~dad~~~a~~~~ 231 (397)
T cd07077 154 AAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP--HIPVIGFGAGNSPVVVDETADEERASGSV 231 (397)
T ss_pred hcCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC--CCceEEecCCcceEEEcCCCCHHHHHHHH
Confidence 79999999997 667889999996 999999999999999987763 68999999999999999999999999999
Q ss_pred HHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCeEEeCC
Q 011107 248 IMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGG 327 (493)
Q Consensus 248 ~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg 327 (493)
++++| +| ||.|+++++||||+++||+|+++|.++++. .+++++.||
T Consensus 232 ~~~~~-~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~--------------------------------~G~~~~~g~ 277 (397)
T cd07077 232 HDSKF-FD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV--------------------------------EGLKVPQET 277 (397)
T ss_pred HHhhc-cC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh--------------------------------cCcCcCCCc
Confidence 99999 99 999999999999999999999999998763 244555555
Q ss_pred ccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHH----HHHHHHhcCCCCcEEEEecCCHHHHHHHHhhccc
Q 011107 328 ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE----DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 403 (493)
Q Consensus 328 ~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~----eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 403 (493)
. ++|+.|| ++|++.+||+||||++|++|+|++ +|++++|+++|||+++|||+|.++++++++++++
T Consensus 278 ~----~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~ 347 (397)
T cd07077 278 K----PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDT 347 (397)
T ss_pred e----eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCE
Confidence 2 4577776 789999999999999999999996 6666889999999999999999999999999999
Q ss_pred ceEEEcCCCcccCCCCCCccCCC--CCCCCCcch-HHHHHHhhhccEEe
Q 011107 404 GGLVINDTAVHLAVHSLPFGGVQ--ESGMGAYHG-KFSFDVFSHKKAVL 449 (493)
Q Consensus 404 g~v~iN~~~~~~~~~~~p~gG~~--~SG~G~~~g-~~~~~~~t~~k~v~ 449 (493)
|.|+||+++.+.....+||||++ .||+|+++| .+++++|++.|+|+
T Consensus 348 G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 348 ASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred EEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence 99999998765444668999999 899999999 99999999999985
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-68 Score=539.02 Aligned_cols=363 Identities=33% Similarity=0.524 Sum_probs=337.4
Q ss_pred HHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhcCCcccc
Q 011107 24 KELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAK 103 (493)
Q Consensus 24 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~ 103 (493)
++|++|+..|+.++.++|.++|+++++.|.++.++|+++++.|+|||..++. .|+..+++.+++++..+..+.....
T Consensus 1 ~~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ev~~~~~~l~~~~~~~~~~~~~~~-- 77 (367)
T cd06534 1 AAARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEAL-GEVARAIDTFRYAAGLADKLGGPEL-- 77 (367)
T ss_pred ChHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcc--
Confidence 3688999999999999999999999999999999999999999999999886 5999999999999988877654211
Q ss_pred cccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhh-cCCCcEEEEe
Q 011107 104 TSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVE 182 (493)
Q Consensus 104 ~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~a-lP~g~v~vv~ 182 (493)
.....+...+++++|+|||++|.|||+|+...++.+++||++||+||+|||+.+|.++..+.+++.++ +|+|++++++
T Consensus 78 -~~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~ 156 (367)
T cd06534 78 -PSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVP 156 (367)
T ss_pred -cccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEE
Confidence 11123456788999999999999999999999999999999999999999999999999999999999 8999999999
Q ss_pred CCh-HhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHHHHhhcccCCCCcc
Q 011107 183 GAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 260 (493)
Q Consensus 183 g~~-~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~~~~~~~~Gq~C 260 (493)
|+. +.+..|+.|+ +|.|+||||+++++.|.+.++++++|+++|+||+|++||++|+|++.|++.+++++| +++||.|
T Consensus 157 ~~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~-~~~gq~C 235 (367)
T cd06534 157 GGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAF-FNAGQIC 235 (367)
T ss_pred cCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCC
Confidence 954 4788999995 999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred cCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCeEEeCCccCCCCceeeceE
Q 011107 261 ISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTL 340 (493)
Q Consensus 261 ~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv 340 (493)
+++++||||++++|+|+++|+ ||
T Consensus 236 ~s~~~v~v~~~~~~~f~~~l~---------------------------------------------------------tl 258 (367)
T cd06534 236 TAASRLLVHESIYDEFVEKLV---------------------------------------------------------TV 258 (367)
T ss_pred CCCcEEEEcHHHHHHHHHhhc---------------------------------------------------------ee
Confidence 999999999999999998887 66
Q ss_pred ecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcccceEEEcCCCcccCCCCC
Q 011107 341 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 420 (493)
Q Consensus 341 l~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~ 420 (493)
+.++++++++++||+||||++|++|++++|+++++|++++||+++|||+|.+.++++++++++|+|+||+.+... .+..
T Consensus 259 ~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~-~~~~ 337 (367)
T cd06534 259 LVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGV-GPEA 337 (367)
T ss_pred eeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCC-CCCC
Confidence 777888999999999999999999999999999999999999999999999999999999999999999987643 7889
Q ss_pred CccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 421 PFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 421 p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
||||.+.||+|+++|++++++||+.|+|.
T Consensus 338 pfgg~~~sG~g~~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 338 PFGGVKNSGIGREGGPYGLEEYTRTKTVV 366 (367)
T ss_pred CCCCcccCccCCCChHHHHHHhceEEEEe
Confidence 99999999999999999999999999874
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-67 Score=570.30 Aligned_cols=382 Identities=20% Similarity=0.217 Sum_probs=314.0
Q ss_pred HHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhH--------HHHHHHHHHHHHH
Q 011107 18 AASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSI--------YEVALLKTSIKSA 89 (493)
Q Consensus 18 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~--------~ev~~~~~~~~~~ 89 (493)
+++..+++|++||..|+.+|.++|.++|++++++|+++.++|+ .++||++.+++. .|+......++++
T Consensus 287 ~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~ 362 (715)
T TIGR01092 287 GERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKISSL 362 (715)
T ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHH
Confidence 3888899999999999999999999999999999999999997 477777765532 2333333334444
Q ss_pred HHHHHhhcCCcc-----cccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHH
Q 011107 90 LKELKHWMTPEK-----AKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (493)
Q Consensus 90 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~ 164 (493)
+..++.+..... .+......+...+.+++|+|||++|+||| |+.+ ++++++||++||+||+|||+.+|.++..
T Consensus 363 ~~~l~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~~ 440 (715)
T TIGR01092 363 AISLRQLAAMEDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNAI 440 (715)
T ss_pred HHHHHHHhcCCCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHHH
Confidence 444444332111 10000011223467899999999999999 9999 6899999999999999999999999999
Q ss_pred HHHHHhhhcCCC----cEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCC
Q 011107 165 LAKLVGEYMDLS----SIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (493)
Q Consensus 165 l~~~l~~alP~g----~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daD 239 (493)
+++++.+++|+| ++|++++..+.+..|..|+ +|+|+||||+++|+.|++.++ ||+++|+|||||+||++|||
T Consensus 441 l~~l~~~alp~g~~~~~~~~v~~~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~---~pv~lElgGk~p~iV~~dAD 517 (715)
T TIGR01092 441 LHKVITEAIPIHVGKKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---IPVLGHADGICHVYVDKSAS 517 (715)
T ss_pred HHHHHHHHcCCCCCCcEEEEeCChHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC---CCEEEEcCCcceEEECCCCC
Confidence 999999999987 6899986555677788885 999999999999999998864 99999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
++.|++.++.++| ++||.|++++|||||+++||+ | .+.++++++.+
T Consensus 518 l~~A~~~i~~~~~--~~GQ~C~a~~rvlV~~~i~d~------------------------~--------~~~~~v~~~~~ 563 (715)
T TIGR01092 518 VDMAKRIVRDAKC--DYPAACNAMETLLVHKDLLRN------------------------G--------LLDDLIDMLRT 563 (715)
T ss_pred HHHHHHHHHHHhC--CCCCccccCcEEEEehhhccc------------------------h--------hHHHHHHHHHH
Confidence 9999877777766 559999999999999999985 0 14456666654
Q ss_pred -CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 011107 320 -SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (493)
Q Consensus 320 -~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 398 (493)
|+++ +||.... .|+. ..+++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++|+
T Consensus 564 ~Ga~l-~Gg~~~~--~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~ 635 (715)
T TIGR01092 564 EGVTI-HGGPRFA--AYLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFL 635 (715)
T ss_pred CCCEE-ECCcchh--heec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHH
Confidence 5566 5875432 2432 13678999999999999999999999999999999999999999999999999999
Q ss_pred hhcccceEEEcCCCcccCCCCCCccCCCCCCCCC----cchHHHHHHhhhccEEeEec
Q 011107 399 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA----YHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 399 ~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~----~~g~~~~~~~t~~k~v~~~~ 452 (493)
+++++|.|+||+++. ..+..||||+|.||+|+ ++|++++++||+.|+|.+..
T Consensus 636 ~~i~sG~V~vN~~~~--~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~ 691 (715)
T TIGR01092 636 QHVDSAAVFHNASTR--FSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGK 691 (715)
T ss_pred HhCCeeEEEEeCCCC--CCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECC
Confidence 999999999998753 34678999999999995 37999999999999998875
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-67 Score=535.33 Aligned_cols=374 Identities=18% Similarity=0.192 Sum_probs=311.0
Q ss_pred HHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHH------HHhhcCCCc------hhhhHHHHHHHHHHHHHHHHHH
Q 011107 26 LRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDA------LRQDLDKPE------LESSIYEVALLKTSIKSALKEL 93 (493)
Q Consensus 26 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~------~~~e~Gk~~------~~a~~~ev~~~~~~~~~~~~~~ 93 (493)
|++||..|+++|.++|.++|++++++|++++++|+++ ++.|+|||. .+++ .|+..+++.++++++..
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~-~ev~~~~~~~~~~a~~a 79 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTE-GRLKGIADGVKDVIELA 79 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCH-HHHHHHHHHHHHHhcCC
Confidence 5789999999999999999999999999999999999 999999993 2343 58999999999988766
Q ss_pred HhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHH----
Q 011107 94 KHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV---- 169 (493)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l---- 169 (493)
+.. . +..+......+...+++++|+|||++|+||| | ..+++++++||++||+||+|||+.+|.++..+++++
T Consensus 80 ~~~-g-~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al 155 (398)
T TIGR00407 80 DPV-G-KVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDAL 155 (398)
T ss_pred CCC-c-ccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHH
Confidence 432 2 2111100112345688999999999999997 6 678899999999999999999999999999999995
Q ss_pred hhh-cCCCcEEEEeC-ChH-hHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHH
Q 011107 170 GEY-MDLSSIRVVEG-AVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACR 245 (493)
Q Consensus 170 ~~a-lP~g~v~vv~g-~~~-~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~ 245 (493)
.++ +|+|+||+|+| +.+ .++.|..|+ |++|+||||+.+|+.+++. ..+|+++|+|||||+||++|||+|.|++
T Consensus 156 ~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~---~~~~~~~e~gGk~p~iV~~dADl~~Aa~ 232 (398)
T TIGR00407 156 AQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT---STIPVLGHGDGICHIYLDESADLIKAIK 232 (398)
T ss_pred HHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh---CCCCEEEecCCcceEEEeCCCCHHHHHH
Confidence 477 99999999997 544 677788885 9999999999999988764 3589999999999999999999999999
Q ss_pred HHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCeEEe
Q 011107 246 RMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVH 325 (493)
Q Consensus 246 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~ 325 (493)
.+++|+| .+ ||.|++++|+|||+++||+|+++|++++.++.. .+++ .+.+.+++..
T Consensus 233 ~iv~~~~-~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~-------~~~~------~~~i~~~v~~--------- 288 (398)
T TIGR00407 233 VIVNAKT-QR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV-------TIHA------DAYALKLLEL--------- 288 (398)
T ss_pred HHHhhhc-CC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC-------EEec------CHHHHHHHhc---------
Confidence 9999999 75 999999999999999999999999999887532 1221 1344444431
Q ss_pred CCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcccce
Q 011107 326 GGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 405 (493)
Q Consensus 326 gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~ 405 (493)
|| ||++ +.+|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++++++|.
T Consensus 289 g~----------~tv~---~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~ 355 (398)
T TIGR00407 289 GP----------ATEA---IVCKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAA 355 (398)
T ss_pred cC----------cccc---ccccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeE
Confidence 11 3554 3337899999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCcccCCCCCCccCCCC----CCCCCcchHHHHHHhhhcc
Q 011107 406 LVINDTAVHLAVHSLPFGGVQE----SGMGAYHGKFSFDVFSHKK 446 (493)
Q Consensus 406 v~iN~~~~~~~~~~~p~gG~~~----SG~G~~~g~~~~~~~t~~k 446 (493)
|+||+++. ..+..|||=-.. ++.....|+.+++.||..|
T Consensus 356 v~iN~~~~--~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 356 VYHNASTR--FTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred EEEeCCCC--cCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 99999765 345679972122 2334557999999998765
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-67 Score=507.66 Aligned_cols=424 Identities=20% Similarity=0.286 Sum_probs=378.1
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (493)
++++++++++++-.|+++|+++|+.||. .|+++|..+|.+.|.+++++++++.++|+.+.+.|.|.-..-+.-.-+..
T Consensus 446 ~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~eelat~e~ldagavytlalkthvgm 525 (881)
T KOG2452|consen 446 DGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGM 525 (881)
T ss_pred CCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccchhhhhhhccccceeeeeehhhcCc
Confidence 5789999999999999999999999997 69999999999999999999999999999999999997666654456777
Q ss_pred HHHHHHHHHHHHHhhcCCcccccccc-cCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchH
Q 011107 82 LKTSIKSALKELKHWMTPEKAKTSIT-TFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~ 160 (493)
.++.++|++...+++.. ...+.... .....+.+.++|+|||++|.|||||+..+.|+.+.+|++--
T Consensus 526 si~~~ryfagwcdkiqg-~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlswk~aaclaa~~------------ 592 (881)
T KOG2452|consen 526 SIQTFRYFAGWCDKIQG-STIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAQV------------ 592 (881)
T ss_pred eehHHHHhhhhhhhccC-ceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHHHHHHHHHHHH------------
Confidence 88999999887776533 33332211 12235788999999999999999999999999998886421
Q ss_pred HHHHHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhc-cccchhhhcCCCCeEEEcCC
Q 011107 161 SSSLLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 161 ~~~~l~~~l~~alP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~-~~~~~~~elgG~~p~iV~~d 237 (493)
..+++ -.|++|+++| +.-+++.|.+|| |+.|-||||+++|+.|++.++. +.|++.+|+||++|+||+.|
T Consensus 593 --~k~~e------~sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sca~snikkvslelgg~sp~iifad 664 (881)
T KOG2452|consen 593 --LKFAE------LTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGESPFIIFAD 664 (881)
T ss_pred --hhhhh------hcceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHHhhcchheeeeeccCCCceEEEec
Confidence 11222 2489999999 455789999996 9999999999999999999885 46899999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
||+++|+.....+.| ++.|..|++..|+||.++|.|+|+.++.++.+++++|+|. .+++-||.-...+..++.+|++.
T Consensus 665 ~dl~kav~~~~~~vf-f~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr~t~hgpqnh~ahl~kl~ey~~~ 743 (881)
T KOG2452|consen 665 CDLNKAVQMGMSSVF-FSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQH 743 (881)
T ss_pred CcHHHHHHhhcccee-ecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCcccccccCCchhHHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999994 78999999999999999999999
Q ss_pred HHh-CCeEEeCCcc-CCCCceeeceEecCCCCCCcccccccccceeeeEeeC--CHHHHHHHHhcCCCCcEEEEecCCHH
Q 011107 317 DKV-SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTNNKK 392 (493)
Q Consensus 317 a~~-~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~ 392 (493)
+.+ ++++.+||.. +..|.|++|||+++++..|.+..||-||||+.|.+|+ |+|++++.+|++++||+++|||+|..
T Consensus 744 ~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~~vl~ran~tefgla~gvftrd~~ 823 (881)
T KOG2452|consen 744 GVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASGVFTRDIN 823 (881)
T ss_pred HhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHHHHHhhccccccccccceeecccc
Confidence 866 5699999986 5579999999999999999999999999999999997 58899999999999999999999999
Q ss_pred HHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 393 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 393 ~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
.+.++++.+++|+|+||+..- .+-..||||+|.||+|...|.+++.+|.+.|+|++.
T Consensus 824 k~l~v~~~l~agtvfvnty~k--tdvaapfggfkqsgfgkd~ge~alneyl~~ktit~e 880 (881)
T KOG2452|consen 824 KALYVSDKLQAGTVFVNTYNK--TDVAAPFGGFKQSGFGKDLGEAALNEYLRVKTVTFE 880 (881)
T ss_pred hhhhhhhhhccceEEEeeccc--cccccCCCCccccccccchhHHHHhhheeeEEEEee
Confidence 999999999999999998653 456789999999999999999999999999999864
|
|
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-66 Score=495.25 Aligned_cols=454 Identities=20% Similarity=0.294 Sum_probs=400.8
Q ss_pred chhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHH-hcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 011107 3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN-EREPDIVDALRQDLDKPELESSIYEVAL 81 (493)
Q Consensus 3 ~~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~-~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (493)
.++..+|++..++..+++.||++|.+|+..|..+|..+|.+++++.|+++. +++-+|......-.||+..++..+-+..
T Consensus 82 ~hq~~lA~~~yA~~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlistkyr~~l~aatMlgqgKt~~qAeiDa~~e 161 (561)
T KOG2455|consen 82 NHQHVLAKVYYATKKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLISTKYRYDLLAATMLGQGKTAIQAEIDAAAE 161 (561)
T ss_pred hhhhhhhheeeccHHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCcchHHHHHHHHHH
Confidence 467889999999999999999999999999999999999999999999998 7788888889999999999986555677
Q ss_pred HHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecc-eEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchH
Q 011107 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPF-GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~ 160 (493)
.++.+++.+.++.++...+.... ..+-.+...++|+ |.|++|+||||-....-...+||| +||+|++|||..+.+
T Consensus 162 Lidf~R~na~ya~eL~~~qpi~~---~~~t~ns~~yRpleGFVaAisPFnftAI~gnLa~aPaL-MGN~VLwkPS~ta~l 237 (561)
T KOG2455|consen 162 LIDFFRFNAKYASELYAQQPISQ---TKGTWNSMEYRPLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAAL 237 (561)
T ss_pred HHHHHHHhHHHHHHhhhcCCccc---cCCCCcceeeccccceeEEecccceeeeccccccChhh-hcceeeecccchhHH
Confidence 88899998888887765443321 3455677888999 999999999997766666667777 999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhcc------ccchhhhcCCCCe
Q 011107 161 SSSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH------LTPVLLELGGKSP 231 (493)
Q Consensus 161 ~~~~l~~~l~~a-lP~g~v~vv~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~------~~~~~~elgG~~p 231 (493)
+..++.++|+|+ +|+|++|+|+++ ...++.+.+++ ...+.||||..+-+.+.+..+.+ .-+++.|+||||-
T Consensus 238 ssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNF 317 (561)
T KOG2455|consen 238 SSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLWKKVGENVDNYRTFPRLVGECGGKNF 317 (561)
T ss_pred HHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHHHHHHhhhhhhhcchhhhccCCCcce
Confidence 999999999999 999999999995 45678888885 99999999999999998877754 4678999999999
Q ss_pred EEEcCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC--CCCCcccccCCHHHHHH
Q 011107 232 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP--LESKDLSRIVNSNHFAR 309 (493)
Q Consensus 232 ~iV~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~--~~~~~~gpl~~~~~~~~ 309 (493)
-+|+++||++.++...++++| ..+||.|++.+|+||+++.++.+.+.|.+...+++.||| +-++.+||+|+.+.++|
T Consensus 318 HfVH~SA~VesvV~~TvrsAf-ey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~r 396 (561)
T KOG2455|consen 318 HFVHASADVESVVSSTVRSAF-EYQGQKCSACSRMYVPESLWPQIREELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFAR 396 (561)
T ss_pred EEeccccchHHHHHHHHHHHH-hhcccccchhhhcccchhhcHHHHHHHHHHHhhcccCCccccccchhhhhccHHHHHH
Confidence 999999999999999999999 999999999999999999999999999999999999997 35789999999999999
Q ss_pred HHHHHHHHHhC--CeEEeCCccCC-CCceeeceEecCCCCCCcccccccccceeeeEeeC--CHHHHHHHH-hcCCCCcE
Q 011107 310 LSKLLDDDKVS--GKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDII-NSGTKPLA 383 (493)
Q Consensus 310 ~~~~i~~a~~~--~~~~~gg~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~-n~~~~gl~ 383 (493)
++++|++|+.. .++++||..++ .|+|+.|||+..-+|.++++.||+|||||+|+.|+ +++|+++++ |.++|||+
T Consensus 397 l~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLT 476 (561)
T KOG2455|consen 397 LKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDEVLKLVDNTTPYALT 476 (561)
T ss_pred HHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEEEeccccHHHHHHHHhcCCcceec
Confidence 99999999764 48999999864 69999999999999999999999999999999997 489999998 46899999
Q ss_pred EEEecCCHHHHHHHHhhcc--cceEEEcCCCcccCCCCCCccCCCCCCCCC-cchHHHHHHhhhccEEeEecCCCCCCcc
Q 011107 384 AYLFTNNKKLKQQFVETVS--AGGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSFDVFSHKKAVLSRGFIGDVPVR 460 (493)
Q Consensus 384 a~v~t~d~~~~~~~~~~l~--~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~-~~g~~~~~~~t~~k~v~~~~~~~~~~~~ 460 (493)
.+||++|.+.+.+..++++ +|..+||+-+++......||||...||+.. .+|+.-+..|+.+++|--+ |-...+++
T Consensus 477 GaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKaGgp~~l~RwtSp~~ikEt-~~~l~d~~ 555 (561)
T KOG2455|consen 477 GAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKAGGPHYLLRWTSPLSIKET-FVPLTDVK 555 (561)
T ss_pred cccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCCCCCCceEEEeecCcchhhhc-ccCCcccC
Confidence 9999999999999998774 899999998888788889999999999975 4788888888888876332 33344555
Q ss_pred CC
Q 011107 461 YP 462 (493)
Q Consensus 461 ~~ 462 (493)
||
T Consensus 556 yp 557 (561)
T KOG2455|consen 556 YP 557 (561)
T ss_pred cC
Confidence 54
|
|
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-66 Score=481.52 Aligned_cols=442 Identities=19% Similarity=0.268 Sum_probs=401.5
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+-+|++.+-.++-+|.+.+++.|++|++.|...|..+|.++++++.+.|++..+-|.++++.|+||-..|.. +|+...+
T Consensus 42 nn~pia~v~~asv~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg~lvslemgkilaegv-gevqeyv 120 (507)
T KOG2453|consen 42 NNSPIANVQNASVQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLGKLVSLEMGKILAEGV-GEVQEYV 120 (507)
T ss_pred CCChhHHHhhccHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhHhhhcc-hhHHHHH
Confidence 457899999999999999999999999999999999999999999999999999999999999999999985 7999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.|+|+....+.+.. ..++. +..+.--...|-|+|+|++|+.+|||....-|.-..|+.+||+|++||++.+|+++.
T Consensus 121 dicdyavglsr~l~g-~i~ps--erpghalleqwnplg~vgvitafnfpcavygwnnaiaMv~gncVvWKpApttpLtTi 197 (507)
T KOG2453|consen 121 DICDYAVGLSRSLEG-KIFPS--ERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTI 197 (507)
T ss_pred HHHHHhhhhhhhhCC-cccCC--CCCchhHHHhcCCcceEEEEEeccCCceeeccCchhhhhhcceeEecCCCCcceeHH
Confidence 999998876665433 22221 112333456789999999999999999999999999999999999999999999877
Q ss_pred HHHHHHhh----h-cCCCcEEEEeCChHhHHHHHhC-CCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCC
Q 011107 164 LLAKLVGE----Y-MDLSSIRVVEGAVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 164 ~l~~~l~~----a-lP~g~v~vv~g~~~~~~~L~~~-~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~d 237 (493)
.+-+++.+ - +|++......|..+.++++.+. ++..+.||||++.++.+.+....+..+..+|+||+|+.||.+|
T Consensus 198 AvtklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqarfgk~llelggnnaiiv~ed 277 (507)
T KOG2453|consen 198 AVTKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQARFGKLLLELGGNNAIIVNED 277 (507)
T ss_pred HHHHHHHHHHhccCCCcceeeecccchhhhhhccccCceeecccccchhhhhHHHHHHHHHhhhHHHhhcCCceEEEecc
Confidence 66665554 3 7888888888888999999987 6999999999999999998888888899999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
||+..++...++++. ..+||.|+..+|++||+++||+++++|+...+++++|+|. +.+-+||+.++++..+.+.-+++
T Consensus 278 adl~lvvps~lfaav-gtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~ntl~gplht~qav~~f~~~vee 356 (507)
T KOG2453|consen 278 ADLNLVVPSTLFAAV-GTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEE 356 (507)
T ss_pred ccceeeehHHHHHHh-cccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCceeccccCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999995 67899999999999999999999
Q ss_pred HHh-CCeEEeCCcc-CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 317 DKV-SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 317 a~~-~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
++. +|++++||.. +.+|+|++|||++ ..+|.++..+|.|.||+.|.+|++++||+.+-|..+.||+++|||+|.+.+
T Consensus 357 ak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea~ainnev~qglsssift~n~~ni 435 (507)
T KOG2453|consen 357 AKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNI 435 (507)
T ss_pred HHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhhheeccccccccchhhhhcCHHHH
Confidence 965 7899999986 5589999999998 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHh--hcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 395 QQFVE--TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 395 ~~~~~--~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
-++.. .-++|.|.||-++.+ ...+..|||.|.+|.||+.|.+++++|+++.+.++++
T Consensus 436 frw~gpkgsdcgivnvniptsg-aeiggafggek~tgggresgsdswkqymrrstctiny 494 (507)
T KOG2453|consen 436 FRWMGPKGSDCGIVNVNIPTSG-AEIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTINY 494 (507)
T ss_pred HhhhCCCCCccceEEecCCCCc-hhhcccccCccccCCCcccCchHHHHHHhhceeeeec
Confidence 99986 448999999987654 5677889999999999999999999999999998875
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=302.24 Aligned_cols=362 Identities=17% Similarity=0.155 Sum_probs=248.3
Q ss_pred CHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHh----cHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHH--
Q 011107 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNE----REPDIVDALRQDLDKPELESSIYEVALLKTSIKS-- 88 (493)
Q Consensus 15 ~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~----~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~-- 88 (493)
+.+++++.++..+........++.++..+++.++++.+.. .+.+..+.+..-+|.+...-. .++......++.
T Consensus 3 ~~~~~~~~~~~l~~~~~~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~-~a~~~l~~~~~r~~ 81 (422)
T cd07080 3 SAPDLDALIEELRLNRRALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLR-EGLKRLMALFRREN 81 (422)
T ss_pred CHHHHHHHHHHHHhhHHhHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHH-HHHHHHHHHcCHHH
Confidence 3455666666666555555667777777777777766642 344555556666666643332 232222222221
Q ss_pred HHHHHHhhcC-CcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHH
Q 011107 89 ALKELKHWMT-PEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAK 167 (493)
Q Consensus 89 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~ 167 (493)
.-..+.+.+. ........ ..+...+++++|+||+++|+|||+|+ ..++.+++||++||++|+|||+.+|.++..+.+
T Consensus 82 l~~~l~~el~~~~~Ld~w~-~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~ 159 (422)
T cd07080 82 LERILERELGSPGILDEWV-PPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLR 159 (422)
T ss_pred HHHHHHHhcCCcccccCCc-cCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHH
Confidence 0001111111 11111110 11345688999999999999999999 799999999999999999999999999999999
Q ss_pred HHhhhcCC----CcEEEE--eC-ChHhHHHHHhCCCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCC-CeEEEcCCC-
Q 011107 168 LVGEYMDL----SSIRVV--EG-AVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGK-SPVVFDSGI- 238 (493)
Q Consensus 168 ~l~~alP~----g~v~vv--~g-~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~-~p~iV~~da- 238 (493)
++.+++|+ +.++++ +| +.+.++.|++++ |.|+||||+++++.|++.++.+ +.++|+||| +++|+++++
T Consensus 160 ~l~~~~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~-D~i~~~Gs~~~~~~i~~~a~~~--~~~Le~Ggk~s~~vi~~~a~ 236 (422)
T cd07080 160 SLADVDPNHPLTDSISVVYWPGGDAELEERILASA-DAVVAWGGEEAVKAIRSLLPPG--CRLIDFGPKYSFAVIDREAL 236 (422)
T ss_pred HHHhcCCCCcccceEEEEEecCCchHHHHHHHHhC-CEEEEeCCHHHHHHHHHhCCCC--CeeeecCCceeEEEecHHhh
Confidence 99999888 888988 46 344788899888 9999999999999999988754 468999999 556666668
Q ss_pred ---CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcc---hHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHH
Q 011107 239 ---NLKVACRRMIMGKWGCNNGQACISPDHIITTKDY---APKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSK 312 (493)
Q Consensus 239 ---Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i---~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~ 312 (493)
|++.+++.+++++| .++||.|+|+++||||+++ +++|+++|.++++++....|.. ++ +.+...++..
T Consensus 237 ~~~dl~~aa~~~a~~~~-~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~-----~~-~~~~~~~~~~ 309 (422)
T cd07080 237 ESEKLAEVADALAEDIC-RYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPAL-----SL-SAAESAKIAR 309 (422)
T ss_pred ccccHHHHHHHHHHHHH-HHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCC-----CC-CHHHHHHHHH
Confidence 99999999999999 9999999999999999999 9999999999999876433211 11 2333333322
Q ss_pred HHHHHHh-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCH
Q 011107 313 LLDDDKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 391 (493)
Q Consensus 313 ~i~~a~~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~ 391 (493)
.-..+.. +.+.... .+.++ ||+..-. ..+.. ...+=.+.|+++++++|++..++. +=.|++++..+.
T Consensus 310 ~r~~~~~~~~~~~~~---~~~~~----~v~~~~~--~~~~~-~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~ 377 (422)
T cd07080 310 ARLEAEFYELKGGVS---RDLGW----TVIISDE--IGLEA-SPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPA 377 (422)
T ss_pred HHHHHHHHHHhcCCC---CCCCe----EEEEeCC--CCccC-CCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecChh
Confidence 2221111 1111101 11121 3332222 11111 344557889999999999999986 667999999988
Q ss_pred HHHHHHHhhcc
Q 011107 392 KLKQQFVETVS 402 (493)
Q Consensus 392 ~~~~~~~~~l~ 402 (493)
+. .++++++.
T Consensus 378 ~~-~~~~~~l~ 387 (422)
T cd07080 378 EL-AELADALA 387 (422)
T ss_pred hH-HHHHHHHH
Confidence 87 67777775
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=280.13 Aligned_cols=391 Identities=17% Similarity=0.200 Sum_probs=302.9
Q ss_pred HHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCC----CchhhhHHHHHHHHHHHHHHHHH
Q 011107 17 EAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDK----PELESSIYEVALLKTSIKSALKE 92 (493)
Q Consensus 17 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk----~~~~a~~~ev~~~~~~~~~~~~~ 92 (493)
.++.+..++|++|...+..++.++|.+.|.++++.|+++.++|.++..+|.-. .+.++..+.+...-..++.+++.
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 45778889999999999999999999999999999999999998877766321 23333333444444555555555
Q ss_pred HHhhcCC-cccc----cccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHH
Q 011107 93 LKHWMTP-EKAK----TSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAK 167 (493)
Q Consensus 93 ~~~~~~~-~~~~----~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~ 167 (493)
++....- .++. ......+-..+..+.|+||+++| |..-....+....-||++||+||+|-+..+..+...+++
T Consensus 83 l~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~ 160 (417)
T COG0014 83 LRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVE 160 (417)
T ss_pred HHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHH
Confidence 5544321 1111 11112344567789999999999 777777788888899999999999999999999999999
Q ss_pred HHhhh-----cCCCcEEEEeC-ChHhHHHHHhC-C-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCC
Q 011107 168 LVGEY-----MDLSSIRVVEG-AVAETSALLDQ-K-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (493)
Q Consensus 168 ~l~~a-----lP~g~v~vv~g-~~~~~~~L~~~-~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daD 239 (493)
+++++ +|++.||+++. +.+....|+.. . +|.|+-.||..--+.|.+.+. .||+-.+-|++.++|+.+||
T Consensus 161 ~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~---vPVi~~~~G~CHiyvd~~AD 237 (417)
T COG0014 161 VIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENAT---VPVIEHGVGNCHIYVDESAD 237 (417)
T ss_pred HHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCc---CCEEecCcceEEEEecccCC
Confidence 88874 79999999998 77888888876 4 999999999998888877654 89999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
+|.|.+-+++++. ... -.|++.+.++||+.++++|+..|.+.+....+. -. .++ ...+++.+
T Consensus 238 ld~A~~ii~nAKt-qrP-s~CNA~EtLLVh~~ia~~fLp~l~~~l~~~gve------lr---~d~----~~~~~~~~--- 299 (417)
T COG0014 238 LDKALKIIVNAKT-QRP-SVCNAAETLLVHRAIAKSFLPKLANALQEAGVE------LR---GDA----EALALLPD--- 299 (417)
T ss_pred HHHHHHHHHcccC-CCC-cccchHHHHHcCHHHHHHhHHHHHHHHHhcCeE------EE---cCH----HHHHhccc---
Confidence 9999999999998 544 489999999999999999999999887632110 00 000 11111110
Q ss_pred CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHh
Q 011107 320 SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 399 (493)
Q Consensus 320 ~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 399 (493)
.+ .+....-+..|...+++.|..+++++|||+++|..+.+||-+|.|+|...+++|.+
T Consensus 300 ------------~~----------~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~ 357 (417)
T COG0014 300 ------------AV----------KPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYANAERFVN 357 (417)
T ss_pred ------------cC----------CCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHh
Confidence 00 12222236789999999999999999999999999999999999999999999999
Q ss_pred hcccceEEEcCCCcccCCCCCCccCCCCCCC--CCcchHHHHHHhhhccEEeEec
Q 011107 400 TVSAGGLVINDTAVHLAVHSLPFGGVQESGM--GAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 400 ~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~--G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
.+++..|+||.++.+.....+.||+.-.-.+ ..-.|+-|++++|..|.+....
T Consensus 358 ~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G~ 412 (417)
T COG0014 358 EVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRGD 412 (417)
T ss_pred hcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhcceeEEEeCC
Confidence 9999999999988765545555554322222 3346999999999999998765
|
|
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=215.17 Aligned_cols=381 Identities=22% Similarity=0.233 Sum_probs=280.3
Q ss_pred HHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHH------HhhcCCCchhhhHHHHHHHHHHHHHHHHH
Q 011107 19 ASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDAL------RQDLDKPELESSIYEVALLKTSIKSALKE 92 (493)
Q Consensus 19 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~------~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~ 92 (493)
+++..+.||++.+.++.++.++|.++|.+++++|..+..++.++. ++|.|. .+.....+...-..+.....-
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL--~~sll~RL~l~~~K~~sl~~g 79 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGL--AESLLKRLDLSPGKISSLAAG 79 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCc--cHHHHHHhcCChHHHHHHHHH
Confidence 456778899999999999999999999999999998766665433 445663 333222333333344444443
Q ss_pred HHhhcCCc-cccc----ccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHH
Q 011107 93 LKHWMTPE-KAKT----SITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAK 167 (493)
Q Consensus 93 ~~~~~~~~-~~~~----~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~ 167 (493)
++.....+ ++.. .....+-.-+..-.|+||.++| |....-.+..-..-|++.||.+++|-...+..+...|.+
T Consensus 80 ~~~ia~~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~ 157 (433)
T KOG4165|consen 80 LRQIAELEDPVGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHK 157 (433)
T ss_pred HHHHHhcccchhhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHH
Confidence 33332211 1110 0011233345677899999999 666555566666779999999999999999999999999
Q ss_pred HHhhhc-----CCCcEEEEeCChHhHHHHHhC-C-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 168 LVGEYM-----DLSSIRVVEGAVAETSALLDQ-K-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 168 ~l~~al-----P~g~v~vv~g~~~~~~~L~~~-~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
++++++ |.+.||+|+.. +....|++. + ||.|+-.||..-.+.|.... ..||..+..|.+.++|++|||+
T Consensus 158 ~v~~al~~~~~~~~aV~LV~sR-Eev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~t---kIPVLGHA~GichvYvd~dad~ 233 (433)
T KOG4165|consen 158 LVQEALGTHGGPGKAVQLVTSR-EEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTT---KIPVLGHAEGICHVYVDKDADL 233 (433)
T ss_pred HHHHHhhhccCchhhhhheecH-HHHHHHhhhhhheeEEecCCcHHHHHHHhhcc---cCcccccccceeEEEeccccCH
Confidence 999874 67789999754 555666665 4 99999999999988886543 2899999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcc-hHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDY-APKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
++|.+-+..+++ +..-.|++.+.+++|++. ...|.+.+...+. .
T Consensus 234 ~kA~riv~DaK~--dYPAaCNAmETLLIh~dl~~~~~~~~l~~~l~---------------------------------~ 278 (433)
T KOG4165|consen 234 DKAKRIVRDAKC--DYPAACNAMETLLIHKDLEQSPFFDDLINMLK---------------------------------E 278 (433)
T ss_pred HHHHHHHhcccC--CCchhhhhHHHHhccHhhhhcchHHHHHHHHH---------------------------------h
Confidence 999999999987 667799999999999983 3445544444332 2
Q ss_pred CCeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 011107 320 SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (493)
Q Consensus 320 ~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 398 (493)
++.-+++|.+- .-..| -+|...-++.|.-.-.+++-.+++.++||+.+|..+.+++-.|.|+|.+.+++|.
T Consensus 279 ~gVtl~agpkl~~~l~~--------~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl 350 (433)
T KOG4165|consen 279 EGVTLHAGPKLAALLKF--------SPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAEHFL 350 (433)
T ss_pred cCeEEecChhHHhhcCc--------CCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHHHHH
Confidence 33334444321 11111 1344455778888888999999999999999999999999999999999999999
Q ss_pred hhcccceEEEcCCCcccCCCCCCccCCCCCC--CCCc--chHHHHHHhhhccEEeEec
Q 011107 399 ETVSAGGLVINDTAVHLAVHSLPFGGVQESG--MGAY--HGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 399 ~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG--~G~~--~g~~~~~~~t~~k~v~~~~ 452 (493)
..+++..|+.|..+.+ ..++-||=--+-| +++. .|+.|++-++..|++.+.+
T Consensus 351 ~~VDSa~vf~NASTRF--aDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lRG~ 406 (433)
T KOG4165|consen 351 KHVDSACVFHNASTRF--ADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLRGK 406 (433)
T ss_pred hccchhheeecccccc--cccccccccceeeeeccceeccCCccccceeeeeeEEecC
Confidence 9999999999998764 3555564222333 3454 4999999999999988765
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.8e-15 Score=151.67 Aligned_cols=275 Identities=20% Similarity=0.208 Sum_probs=188.0
Q ss_pred ceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhhcCC----CcEEEE--eC-Ch
Q 011107 113 AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL----SSIRVV--EG-AV 185 (493)
Q Consensus 113 ~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~alP~----g~v~vv--~g-~~ 185 (493)
.+.++.|.|++++|.|.|-|+.... .++.+|.+||..|+|+|...+.++..+.+.|.+..|. ..+.++ ++ +.
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~~~-S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~~~~~~l~~~i~v~~~~~~d~ 159 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVGFY-SLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEIDPEHPLADSIAVVYWPGGDE 159 (399)
T ss_pred chhhccCCceEEEEcCCCccchHHH-HHHHHHHhCCceEEECCCCchhHHHHHHHHHHhhCccchhhhcEEEEEecCCch
Confidence 6778999999999999999987554 5778899999999999999999999999999887665 356666 34 33
Q ss_pred HhHHHHHhCCCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHHHHhhcccCCCCcccCCCE
Q 011107 186 AETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 265 (493)
Q Consensus 186 ~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~ 265 (493)
+..+.+. ...|.|+.+||.++.+.+.+ ..+..++.+....-.+-++|..+++++.+++.++.-.+ ...+|.|.|++.
T Consensus 160 ~~~~~~~-~~~D~vv~wGgd~ti~~ir~-~~~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~-~~dQ~aCsSp~~ 236 (399)
T PF05893_consen 160 ELEEALS-QQADAVVAWGGDETIRAIRQ-PLPPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIF-LFDQQACSSPQV 236 (399)
T ss_pred HHHHHHH-HHCCEEEEeCCHHHHHHHHH-HcCCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHH-HhhCcccCCCeE
Confidence 4444454 45799999999999999987 33344555656667778899999999999999999999 999999999999
Q ss_pred EEEc---CcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHH-----HHhCC-eEEeCCccCCCCcee
Q 011107 266 IITT---KDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDD-----DKVSG-KIVHGGERDKNKLRI 336 (493)
Q Consensus 266 v~V~---~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~-----a~~~~-~~~~gg~~~~~g~~~ 336 (493)
|||. +.-.++|.++|.+.+.+...--|.. ..+.+....+....+. +..+. ++. ++.. +
T Consensus 237 ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~------~~s~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~~---~--- 303 (399)
T PF05893_consen 237 IFVETGDGDSVEEFAERLAEALERAAERYPRG------ELSIDEAAAISSLRAEAELRYALDGEYRVW-SSDD---N--- 303 (399)
T ss_pred EEEECCCcccHHHHHHHHHHHHHHHHHhCCCc------CCCHHHHHHHHHHHHHHHHHHHhcCCccee-ecCC---C---
Confidence 9999 3345888888877777653211110 1122222222222222 22233 333 2211 1
Q ss_pred eceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc-ccceEEE
Q 011107 337 APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV-SAGGLVI 408 (493)
Q Consensus 337 ~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~v~i 408 (493)
.-||+..-. +. .....++=.+.|.++++.+|++..++....=.|++++.... ....+++.+ ..|.--|
T Consensus 304 ~~~V~~~~~--~~-~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~~-~~~~~~~~l~~~Gv~Ri 372 (399)
T PF05893_consen 304 SWTVIVSPE--PP-LLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWSE-RLEELARALAAAGVDRI 372 (399)
T ss_pred CEEEEECCC--cc-cccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecChh-hHHHHHHHHHhcCCeee
Confidence 125553322 12 22333455888999999999999999874324778875553 455555533 4453333
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.9e-14 Score=116.24 Aligned_cols=145 Identities=23% Similarity=0.283 Sum_probs=112.7
Q ss_pred hHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHH--hCCeEEeCCccCCCCceeeceEecCCCCCCc
Q 011107 273 APKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK--VSGKIVHGGERDKNKLRIAPTLLLDVPRDSL 349 (493)
Q Consensus 273 ~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~--~~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~ 349 (493)
+..+.+.|++..+.+++.+.+ +++|. .+..+++.++|+.-. .+..+..-|. ..|+|+.||+|. |+|+|.
T Consensus 8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~y--a~~~f~~~tiLs-vtP~ms 79 (157)
T KOG2449|consen 8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGY--AEGNFVGPTILS-VTPNMS 79 (157)
T ss_pred hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeecc--ccCCcccceEEE-ecCCcc
Confidence 355667777888877754443 45665 566788888887521 1222322222 368899999998 999999
Q ss_pred ccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcccceEEEcCCCcccCCCCCCccCCC
Q 011107 350 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQ 426 (493)
Q Consensus 350 i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~ 426 (493)
++.||+||||+..+.-++++|+|.++|+++||....|||.+.+.++++....++|.|-+|.+.. ...+...|.|.+
T Consensus 80 ~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip-~ilk~~sfsg~~ 155 (157)
T KOG2449|consen 80 CYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIP-VILKMFSFSGDR 155 (157)
T ss_pred eeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceecccccc-ccccceeccccC
Confidence 9999999999999999999999999999999999999999999999999999999999997543 234455555543
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.4e-10 Score=105.48 Aligned_cols=167 Identities=10% Similarity=0.119 Sum_probs=126.5
Q ss_pred CCeEEEcCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHH
Q 011107 229 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFA 308 (493)
Q Consensus 229 ~~p~iV~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~ 308 (493)
..-+||++|.|++.|+..++.+.- .--...+.-.|+|||++.|+|+++++.+++.+.. .+.+...+.
T Consensus 5 P~lMIvfe~GDlnsA~~~L~~sl~---~Pf~~~~VatVlVqEsireefi~rvr~~m~pl~~----------~va~Hpny~ 71 (215)
T PF07368_consen 5 PQLMIVFEDGDLNSAMHYLLESLH---NPFAPGAVATVLVQESIREEFIERVRSRMKPLSP----------QVANHPNYL 71 (215)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHh---CcccCCcEEEEEEeHHHHHHHHHHHHHhCccCCh----------hhccCcHHH
Confidence 345899999999999999999853 4555678889999999999999999998875431 123334566
Q ss_pred HHHHHHHHHHhCCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcC-CCCcEEEEe
Q 011107 309 RLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG-TKPLAAYLF 387 (493)
Q Consensus 309 ~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~-~~gl~a~v~ 387 (493)
+..+.++. -+.+.+.++... .-..-.|.++.+++... +.. -..+|+++..|++..||++++++. ...-+.+||
T Consensus 72 rsl~~i~~--l~~~~I~~~~~~-~~~~aSPilV~d~~h~~--fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~SVsiW 145 (215)
T PF07368_consen 72 RSLKKIKC--LNAKTIVADFEN-VPPPASPILVCDFTHSY--FGD-GPTGVITLHTFRTPKEAIELCAKETLPFDSVSIW 145 (215)
T ss_pred HHHHHHHh--cCCeEEEecccC-CCCCCCCEEEcCCCHHH--cCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcceEEEe
Confidence 66666653 356777764321 11233688888776542 233 334799999999999999999974 233499999
Q ss_pred cCCHHHHHHHHhhcccceEEEcCCCcc
Q 011107 388 TNNKKLKQQFVETVSAGGLVINDTAVH 414 (493)
Q Consensus 388 t~d~~~~~~~~~~l~~g~v~iN~~~~~ 414 (493)
++-.+.+..++.++++..++||+....
T Consensus 146 ~ekla~~Yel~~~l~~~~f~iNC~~V~ 172 (215)
T PF07368_consen 146 NEKLASAYELAARLPCDTFYINCFNVD 172 (215)
T ss_pred CcHHHHHHHHHHhCCCCEEEEEeccCC
Confidence 999999999999999999999997654
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.2e-05 Score=92.67 Aligned_cols=96 Identities=20% Similarity=0.113 Sum_probs=75.8
Q ss_pred CCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhhcCCCcEEEEeCChHhH
Q 011107 109 FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAET 188 (493)
Q Consensus 109 ~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~alP~g~v~vv~g~~~~~ 188 (493)
.++.+.....|.|++++|+||| ...+.++..||++||+||+||++.++. ....+|..+.+.+ ..+
T Consensus 1068 TGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~--------~~~~Lp~~~~~~~----~~~ 1132 (1208)
T PRK11905 1068 TGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA--------ALADLPGLVAARI----DWT 1132 (1208)
T ss_pred CCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH--------HHHhCcccccccc----ccc
Confidence 4678899999999999999999 557789999999999999999988652 1112566555544 223
Q ss_pred HHHHhC-CCCeEEEeCCHHHHHHHHHHHhccc
Q 011107 189 SALLDQ-KWDKICYTGNSRVARIVMAAAAKHL 219 (493)
Q Consensus 189 ~~L~~~-~v~~v~ftGs~~~g~~i~~~a~~~~ 219 (493)
..+..+ +++.|.|+|+.++.+.+.+..+++.
T Consensus 1133 ~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~ 1164 (1208)
T PRK11905 1133 QDWEADDPFAGALLEGDAERARAVRQALAARP 1164 (1208)
T ss_pred cccccCCcccEEEEeCCHHHHHHHHHHHHhCC
Confidence 456666 4999999999999999998887664
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.5 Score=48.20 Aligned_cols=285 Identities=20% Similarity=0.244 Sum_probs=129.7
Q ss_pred HHHHHHHHHHHhhcCCccccc--cccc-CCCCceeeeecceEEEEEcc---CchhHHhhhhHHHHHHHhCCEE--EEeCC
Q 011107 84 TSIKSALKELKHWMTPEKAKT--SITT-FPSSAEIVPEPFGVVLIISP---WNYPFLLSLDPVVGAIAAGNAL--VLKPS 155 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~P~GVv~~i~p---~n~P~~~~~~~~~~AL~aGN~V--vlkps 155 (493)
+-++.+.++++.|...+.... .... .+.....++.|+--|++..| .-||- +.+..++||-.+|..= ++-|.
T Consensus 68 ~Ai~~A~~~I~~fh~~q~~~~~~~~~~~~G~~~g~~~~Pi~rvG~YVPGG~a~~pS-tvlM~aiPA~vAGV~~Iv~~TPp 146 (412)
T PF00815_consen 68 EAIEQAAENIRAFHEAQLPKKDWEVETEPGVILGQRYRPIERVGLYVPGGRAPYPS-TVLMTAIPAKVAGVKEIVVCTPP 146 (412)
T ss_dssp HHHHHHHHHHHHHHHTT-----EEEEEETTEEEEEEEEE-SEEEEE---SSS--TH-HHHHHHHHHHHHT-SEEEEEE-S
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEecCCcEEEEEEEEhhheEEEccCCCCCccH-HHHHcccchhhcCCCeEEEEcCC
Confidence 445556666666655443211 1111 23445678999999999999 33444 4455678999999754 44554
Q ss_pred CCchH-HHHHHHHHHhhhcCCCcEEEEe-CChHhHHHHH---hC--CCCeEEEeCCHHHHHHHHHHHhccccchhhhcCC
Q 011107 156 EVAPA-SSSLLAKLVGEYMDLSSIRVVE-GAVAETSALL---DQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGG 228 (493)
Q Consensus 156 ~~~~~-~~~~l~~~l~~alP~g~v~vv~-g~~~~~~~L~---~~--~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG 228 (493)
...-. ....|+.+ ..+ |+=.+.. |+.....+|. .. +||+|+=.|+.-+...=..-...-..- -..|
T Consensus 147 ~~~G~i~p~vL~Aa-~~~---Gv~evy~vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~V~ID---~~AG 219 (412)
T PF00815_consen 147 PKDGKINPAVLAAA-HLA---GVDEVYKVGGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGDVGID---MIAG 219 (412)
T ss_dssp S------HHHHHHH-HHT---T-SEEEE--HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS-EES-------
T ss_pred CccCCCCHHHHHHH-HHc---CCCEEEecccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCCcccC---CCCC
Confidence 43111 11222221 111 2222332 3444444444 22 499999888765432211111111111 1234
Q ss_pred CC--eEEEcCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHH
Q 011107 229 KS--PVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNH 306 (493)
Q Consensus 229 ~~--p~iV~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~ 306 (493)
.+ -+|-|++||.+..+.+++.-+= ++.. .+.++|..+ +++.+++.+++.+.... +...
T Consensus 220 PSEv~ViAD~~A~p~~vAaDLLaQAE-Hd~~-----a~~vLvt~s--~~la~~V~~~v~~~l~~----------l~r~-- 279 (412)
T PF00815_consen 220 PSEVLVIADETANPEFVAADLLAQAE-HDPD-----AQAVLVTTS--EELAEAVEAEVERQLEE----------LPRR-- 279 (412)
T ss_dssp --EEEEEE-TTS-HHHHHHHHHHHHT-T-TT------EEEEEES---HHHHHHHHHHHHHHHTT-----------TTH--
T ss_pred CCceEEEECCCCCHHHHHHHHHHHhc-cCCC-----CceEEEECC--HHHHHHHHHHHHHHHHh----------CCch--
Confidence 44 3455678999999988887764 3322 234555555 55666666555543211 0011
Q ss_pred HHHHHHHHHHHHhCCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEE
Q 011107 307 FARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 386 (493)
Q Consensus 307 ~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v 386 (493)
+.++.+.+ +| .++.++|++|+++++|..-. -...|
T Consensus 280 -----~i~~~sl~------------------------------------~g---~ii~~~~l~ea~~~~N~~AP-EHLel 314 (412)
T PF00815_consen 280 -----EIAEKSLE------------------------------------NG---AIIVVDSLEEAIELANEYAP-EHLEL 314 (412)
T ss_dssp -----HHHHHHHT------------------------------------T----EEEE-SSHHHHHHHHHHH---SEEEE
T ss_pred -----HHHHHHHH------------------------------------CC---eEEEECCHHHHHHHHHHhhH-HHHHH
Confidence 11121110 11 14467999999999998422 35678
Q ss_pred ecCCHHHHHHHHhhc-ccceEEEcCCCcc-------cCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 387 FTNNKKLKQQFVETV-SAGGLVINDTAVH-------LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 387 ~t~d~~~~~~~~~~l-~~g~v~iN~~~~~-------~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
.++|.+ .++.++ .+|.|++..++.- ..++.+|- +|..|+.|..+...|.+..++.
T Consensus 315 ~~~~~~---~~~~~i~~AGaiFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 377 (412)
T PF00815_consen 315 QVEDPE---ELLEKIRNAGAIFLGEYTPEALGDYAAGPNHVLPT-----GGTARFSSGLSVDDFLKRISVQ 377 (412)
T ss_dssp ESTTHH---HHGGG--S-SEEEESTT--HHHHHHTSSS-----------TTGGGT---S-GGGGEEEEEEE
T ss_pred HHcCHH---HHHHHhhccChhhcCCCCCHHHhhhccCCCccCCC-----CccccccCCCcHHHccceeeEE
Confidence 899875 455555 5899999975431 13344454 4566777878888888876654
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.64 Score=47.01 Aligned_cols=259 Identities=21% Similarity=0.235 Sum_probs=138.7
Q ss_pred CCCceeeeecceEEEEEccCc---hhHHhhhhHHHHHHHhCCEE--EEeCCCC-chHHHHHHHHHHhhhcCCCcEEEEe-
Q 011107 110 PSSAEIVPEPFGVVLIISPWN---YPFLLSLDPVVGAIAAGNAL--VLKPSEV-APASSSLLAKLVGEYMDLSSIRVVE- 182 (493)
Q Consensus 110 ~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~~~~AL~aGN~V--vlkps~~-~~~~~~~l~~~l~~alP~g~v~vv~- 182 (493)
+.....++.|+.-|++..|.- ||- +.+...+||-.+|..= ++-|... .......|+.+ +.+ |+=.+..
T Consensus 79 Gv~~g~~~~Pi~rvGlYVPGG~a~~pS-tvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~AA-~~~---Gv~eIy~v 153 (393)
T TIGR00069 79 GVILGQRVRPLERVGLYVPGGRAPYPS-TVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLAAA-KLA---GVDEVYKV 153 (393)
T ss_pred CeEEEEEEEEeheEEEEeCCCCCcchH-HHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHHHH-HHc---CCCeehhc
Confidence 345567899999999999973 444 4455577999999764 4445422 11222223221 211 2222222
Q ss_pred CChHhHHHHH---hC-C-CCeEEEeCCHHHHHHHHHHHhccccchhhhc-CCCC--eEEEcCCCCHHHHHHHHHHhhccc
Q 011107 183 GAVAETSALL---DQ-K-WDKICYTGNSRVARIVMAAAAKHLTPVLLEL-GGKS--PVVFDSGINLKVACRRMIMGKWGC 254 (493)
Q Consensus 183 g~~~~~~~L~---~~-~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~el-gG~~--p~iV~~daDl~~Aa~~i~~~~~~~ 254 (493)
|+.....+|. +. + ||+|+=.|+.-+...= +... ..|-..+ .|.+ .+|-+++||.+..+.+++.-+= +
T Consensus 154 GGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~AK-~~v~---g~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAE-H 228 (393)
T TIGR00069 154 GGAQAIAALAYGTETVPKVDKIVGPGNIYVTAAK-KLVF---GDVGIDMPAGPSEVLVIADETANPEFVAADLLSQAE-H 228 (393)
T ss_pred CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHH-HHhc---CccCcCCCCCCceEEEEeCCCCCHHHHHHHHHHHhc-c
Confidence 4545555554 23 3 9999877766432110 0010 1121111 2444 3455567899999988887654 2
Q ss_pred CCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCeEEeCCccCCCCc
Q 011107 255 NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKL 334 (493)
Q Consensus 255 ~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~ 334 (493)
.. ..+.++|..+ .++.++..+.+.+.... +- .. +.++.+.+.
T Consensus 229 -d~----~a~~iLvT~s--~~la~~V~~~v~~ql~~----------l~---r~----~i~~~al~~-------------- 270 (393)
T TIGR00069 229 -DP----DAQAILVTTS--EELAEAVQEEIERQLAT----------LP---RR----EIARKSLED-------------- 270 (393)
T ss_pred -CC----CCcEEEEECC--HHHHHHHHHHHHHHHHh----------CC---hH----HHHHHHHHh--------------
Confidence 22 2344555444 34444444444332100 00 01 122211110
Q ss_pred eeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc-ccceEEEcCCCc
Q 011107 335 RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV-SAGGLVINDTAV 413 (493)
Q Consensus 335 ~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~ 413 (493)
+| .++.++|++|+++++|..-. -..-|.++|.. .+..++ ++|.|++..++.
T Consensus 271 ---------------------~g---~ii~v~~l~ea~~~~N~~AP-EHLel~~~~p~---~~l~~I~nAGaiFlG~~tp 322 (393)
T TIGR00069 271 ---------------------NG---AIILVDDLEEAIEISNDYAP-EHLELQTKNPE---ELLPKIRNAGSIFLGPYTP 322 (393)
T ss_pred ---------------------CC---EEEEECCHHHHHHHHHhhCh-HhheehhCCHH---HHHhhcCccceeccCCCCc
Confidence 11 13467999999999998432 23457888875 455555 589999977543
Q ss_pred cc-------CCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 414 HL-------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 414 ~~-------~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
-. .++-+|- +|..|+.+..+...|.+.-++.
T Consensus 323 ~a~GDY~aG~NHvLPT-----~G~Ar~~sgL~v~~F~K~~s~~ 360 (393)
T TIGR00069 323 EAAGDYAAGPNHVLPT-----GGTARFYSGLSVLDFLKRITVQ 360 (393)
T ss_pred hhhhhccCCCCcccCC-----CcceeecCCccHHHhccceeEE
Confidence 21 2222333 4667777888889998876654
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.56 Score=47.54 Aligned_cols=286 Identities=20% Similarity=0.235 Sum_probs=152.8
Q ss_pred HHHHHHHHHHHhhcCCcccccc-c-ccCCCCceeeeecceEEEEEcc---CchhHHhhhhHHHHHHHhCCEE--EEeCCC
Q 011107 84 TSIKSALKELKHWMTPEKAKTS-I-TTFPSSAEIVPEPFGVVLIISP---WNYPFLLSLDPVVGAIAAGNAL--VLKPSE 156 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~P~GVv~~i~p---~n~P~~~~~~~~~~AL~aGN~V--vlkps~ 156 (493)
+-++.++++++.+...+..... . ...+-.+..++.|+--|++..| .-||-..++ ..+||-.+|+.= ++-|.+
T Consensus 79 eai~~A~~~I~~fH~~Q~p~~~~~~~~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM-~avPAkvAGv~~Iv~~tPp~ 157 (425)
T COG0141 79 EALEVAAENIEAFHEAQLPKDWLVETEPGVVLGQRWRPIERVGLYVPGGKAAYPSTVLM-NAVPAKVAGVEEIVVVTPPP 157 (425)
T ss_pred HHHHHHHHHHHHHHHhhCCCccceeccCCcEEEEEEEEhhheEEEccCCCcCChHHHHH-hhccHhhcCCceEEEECCCC
Confidence 4455566666666555443211 1 1234456778999999999999 566655444 467999999864 444544
Q ss_pred CchHHHHHHHHHHhhhcCCCcEEEEeCChHhHHHHH---hC--CCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCC-
Q 011107 157 VAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALL---DQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKS- 230 (493)
Q Consensus 157 ~~~~~~~~l~~~l~~alP~g~v~vv~g~~~~~~~L~---~~--~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~- 230 (493)
..-.....|+.+ +.+--+.+++ -|+.....+|. .. +||+|+=.|+.-+...= +... ...-+=+- .|.+
T Consensus 158 ~~gv~p~iL~AA-~~~Gv~eIy~--vGGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaAK-r~v~-g~V~ID~~-AGPSE 231 (425)
T COG0141 158 KDGVNPEILAAA-RLAGVDEVYK--VGGAQAIAALAYGTETVPKVDKIVGPGNAYVTAAK-RLVS-GVVGIDMI-AGPSE 231 (425)
T ss_pred CCCCCHHHHHHH-HHhCcHHHHH--ccCHHHHHHHHccCCcCCccCeeeCCCcHHHHHHH-HHhh-CCcccCCC-CCCce
Confidence 311111112111 1110001111 13444455554 22 49999888876442110 0011 11111111 2333
Q ss_pred -eEEEcCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHH
Q 011107 231 -PVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFAR 309 (493)
Q Consensus 231 -p~iV~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~ 309 (493)
-+|-+++||.+..+.+++.-+= ++. ..+.|+|..+ ++|.++..+.+.+.... + .+ .+.
T Consensus 232 vlViAD~ta~p~~vA~DLLsQAE-Hd~-----~a~aiLvT~s--~~la~~v~~~v~~~l~~----------l-~~--~ei 290 (425)
T COG0141 232 VLVIADETANPDFVAADLLSQAE-HDP-----DAQAILVTDS--EELAEAVEAAVERQLET----------L-PR--AEI 290 (425)
T ss_pred EEEEeCCCCCHHHHHHHHHHHhh-cCC-----CceEEEEeCc--HHHHHHHHHHHHHHHHh----------c-cH--HHH
Confidence 3444556999999988887654 322 2344566555 56666666655543210 0 00 111
Q ss_pred HHHHHHHHHhCCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecC
Q 011107 310 LSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 389 (493)
Q Consensus 310 ~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~ 389 (493)
+.+.+. -|| .|+.++|++|+++++|..-. -..-|.++
T Consensus 291 ~~~~l~---------------------------------------~~g---~iilv~~l~ea~~~~N~~AP-EHLei~~~ 327 (425)
T COG0141 291 ARKALE---------------------------------------NYG---AIILVDDLDEAVEISNEYAP-EHLELQTE 327 (425)
T ss_pred HHHHHH---------------------------------------hCC---eEEEECCHHHHHHHHHhhCh-Hhhhhhhc
Confidence 111111 011 24467999999999998432 34568888
Q ss_pred CHHHHHHHHhhc-ccceEEEcCCCccc-------CCCCCCccCCCCCCCCCcchHHHHHHhhhccEE
Q 011107 390 NKKLKQQFVETV-SAGGLVINDTAVHL-------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448 (493)
Q Consensus 390 d~~~~~~~~~~l-~~g~v~iN~~~~~~-------~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v 448 (493)
|+.. ++.++ ++|.|+++.++.-. .++-+| .+|+-|..+..+...|.+.-++
T Consensus 328 ~p~~---~l~~I~nAGsIFlG~~sPe~~GDY~aG~NHVLP-----T~g~AR~~s~L~v~dF~K~~tv 386 (425)
T COG0141 328 NPRE---LLGKIRNAGSIFLGHYSPESLGDYAAGPNHVLP-----TSGTARFSSGLSVYDFLKRSTV 386 (425)
T ss_pred CHHH---HHHHhcccceeeecCCCCccccccccCCCccCC-----CCccchhcCCccHHHhhhHHHH
Confidence 8764 44544 57999999854321 222233 3566677777788888876654
|
|
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=1.2 Score=45.50 Aligned_cols=286 Identities=17% Similarity=0.235 Sum_probs=148.0
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCc-hhH-HhhhhHHHHHHHhCCEEE--EeCCCCch
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWN-YPF-LLSLDPVVGAIAAGNALV--LKPSEVAP 159 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n-~P~-~~~~~~~~~AL~aGN~Vv--lkps~~~~ 159 (493)
+.++.+.++++.+...+.........+.....++.|+--|++..|.- +|+ ++.+...+||-.+|+.=| +-|+....
T Consensus 75 ~ai~~A~~nI~~fh~~q~~~~~~~~~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~ 154 (416)
T PRK13770 75 QALQQSYERIKAYQESIKQTNQQLEESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNG 154 (416)
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEecCCcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCCCC
Confidence 33445555555554433322111122334567889999999999953 233 344456789999998654 44543211
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEe-CChHhHHHHH---hC--CCCeEEEeCCHHHHHHHHHHHhccccchhhh-cCCCC--
Q 011107 160 ASSSLLAKLVGEYMDLSSIRVVE-GAVAETSALL---DQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLE-LGGKS-- 230 (493)
Q Consensus 160 ~~~~~l~~~l~~alP~g~v~vv~-g~~~~~~~L~---~~--~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~e-lgG~~-- 230 (493)
.....|+-+ +.+ |+=.+.. |+.....+|. .. +||+|+=.|+.-+...=.. .. ..|-.. ..|.+
T Consensus 155 i~p~iL~Aa-~~~---Gv~eIy~iGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~-v~---g~V~ID~~AGPSEv 226 (416)
T PRK13770 155 VSQEVLAAC-YIT---QVNQVFQVGGAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKY-LF---GQVGIDQIAGPTEI 226 (416)
T ss_pred CCHHHHHHH-HHc---CCCeeeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHH-hc---CCcCcCCCCCCcee
Confidence 122222211 111 2212222 3545455554 23 3999987776643211000 00 112111 12343
Q ss_pred eEEEcCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHH
Q 011107 231 PVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARL 310 (493)
Q Consensus 231 p~iV~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~ 310 (493)
.+|-+++||.+..+.+++.-+= ++. . .+.++|..+ +++.+++.+++.+.... +.. .+.+
T Consensus 227 lViAD~~Anp~~iAaDLLaQAE-Hd~----~-a~~iLvT~s--~~la~~V~~ev~~ql~~----------lpr---~~i~ 285 (416)
T PRK13770 227 ALIIDETADLDAIVYDVFAQAE-HDE----L-ARTYVISED--AQVLKDLESRIAKALPN----------VDR---YDIV 285 (416)
T ss_pred EEEecCCCCHHHHHHHHHHHhc-cCC----C-CcEEEEeCC--HHHHHHHHHHHHHHHHh----------CCh---HHHH
Confidence 4555667999999988887654 222 2 334555444 34444444444332100 000 1111
Q ss_pred HHHHHHHHhCCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCC
Q 011107 311 SKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390 (493)
Q Consensus 311 ~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 390 (493)
.+-++ -+| .++-++|++|+++++|..-. -..-|.++|
T Consensus 286 ~~al~---------------------------------------~~g---~ii~v~~~eeai~~~N~~AP-EHLel~~~~ 322 (416)
T PRK13770 286 SKSIA---------------------------------------NQH---YLIHASNFDEACHVMNTIAP-EHASIQTVN 322 (416)
T ss_pred HHHHH---------------------------------------hCC---EEEEECCHHHHHHHHHhhCh-HhheehhCC
Confidence 11111 011 13467999999999998432 234588888
Q ss_pred HHHHHHHHhhc-ccceEEEcCCCccc-------CCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 391 KKLKQQFVETV-SAGGLVINDTAVHL-------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 391 ~~~~~~~~~~l-~~g~v~iN~~~~~~-------~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
.+ .+..++ ++|.|++..++.-. .++-+|- +|..|+.+..+...|.+.-++.
T Consensus 323 ~~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 381 (416)
T PRK13770 323 PQ---PYIEKVKYVGALFIGHYSPEVIGDYVAGPSHVLPT-----NRTARFTNGLSVNDFLTRNTVI 381 (416)
T ss_pred HH---HHHhhCCEeceeccCCCCchhhhccccCCCCcCCC-----CcceeccCCCcHHHeecceeeE
Confidence 75 455555 57999997644311 2223333 4666777777888888876653
|
|
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.44 E-value=1.3 Score=45.32 Aligned_cols=330 Identities=18% Similarity=0.206 Sum_probs=169.6
Q ss_pred HHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCC----chhhhHHHHHHH--------HHHHHHHHHHHHhhcCCcccccc
Q 011107 38 YGWRVSQLKSLMKMLNEREPDIVDALRQDLDKP----ELESSIYEVALL--------KTSIKSALKELKHWMTPEKAKTS 105 (493)
Q Consensus 38 ~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~----~~~a~~~ev~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 105 (493)
..+-.+..+.+.+.++.+.|+=....++...+. +.-. ..|+..+ .+.++.+.++++.|...+.....
T Consensus 26 ~~~~~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~Vs-~~ei~~A~~~v~~~~~~ai~~A~~~I~~Fh~~q~~~~~ 104 (425)
T PRK00877 26 DEDVEAAVREILEDVRERGDAALLEYTEKFDGVELESLRVS-EEEIEAAYERLDPELREALEEAAENIRAFHEAQKPESW 104 (425)
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCcccceeC-HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 333445555566666666555443333333221 1111 1233322 34455566666666544432211
Q ss_pred c--ccCCCCceeeeecceEEEEEccC---chhHHhhhhHHHHHHHhCCEE--EEeCCCCchHHHHHHHHHHhhhcCCCcE
Q 011107 106 I--TTFPSSAEIVPEPFGVVLIISPW---NYPFLLSLDPVVGAIAAGNAL--VLKPSEVAPASSSLLAKLVGEYMDLSSI 178 (493)
Q Consensus 106 ~--~~~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~~~~AL~aGN~V--vlkps~~~~~~~~~l~~~l~~alP~g~v 178 (493)
. ...+.....++.|+--|++..|. -||- +.+...+||-.+|..= ++-|..........|+.+ +.+ |+=
T Consensus 105 ~~~~~~Gv~~g~~~~Pi~~vG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPp~~g~i~p~vL~AA-~~~---Gv~ 179 (425)
T PRK00877 105 DVETAPGVRLGQRWRPIERVGLYVPGGKAAYPS-SVLMNAIPAKVAGVKEIVMVTPPPDGEINPAILAAA-ALA---GVD 179 (425)
T ss_pred EEEecCCeEEEEEEEehHHeEEEccCCCCCchH-HHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHHHH-HHc---CCC
Confidence 1 11233456789999999999996 3444 4455578999999764 445543111222222221 111 222
Q ss_pred EEEe-CChHhHHHHH---hC--CCCeEEEeCCHHHHHHHHHHHhccccchhhh-cCCCC--eEEEcCCCCHHHHHHHHHH
Q 011107 179 RVVE-GAVAETSALL---DQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLE-LGGKS--PVVFDSGINLKVACRRMIM 249 (493)
Q Consensus 179 ~vv~-g~~~~~~~L~---~~--~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~e-lgG~~--p~iV~~daDl~~Aa~~i~~ 249 (493)
.+.. |+.....+|. +. +||+|+=.|+.-+...= +... -.|-.. ..|.+ -+|-+++||.+..+.+++.
T Consensus 180 eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK-~~v~---g~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLa 255 (425)
T PRK00877 180 EVYKVGGAQAIAALAYGTESIPKVDKIVGPGNIYVTAAK-RLVF---GVVGIDMIAGPSEILVIADETADPDFVAADLLS 255 (425)
T ss_pred eeeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHH-HHHc---CCcCcCCCCCCceeEEEeCCCCCHHHHHHHHHH
Confidence 2222 4545555554 23 49999888876432110 0011 111111 12444 3444556899999998887
Q ss_pred hhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCeEEeCCcc
Q 011107 250 GKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER 329 (493)
Q Consensus 250 ~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~ 329 (493)
-+= ++. . .+.++|..+ +++.+++.+++.+.... +.. .+.+.+-++
T Consensus 256 QAE-Hd~----~-a~aiLvT~s--~~la~~V~~~v~~ql~~----------l~r---~~ia~~sl~-------------- 300 (425)
T PRK00877 256 QAE-HDP----D-AQSILVTTS--EELAEAVAAEVERQLAT----------LPR---AEIARASLE-------------- 300 (425)
T ss_pred Hhc-cCC----C-CcEEEEECC--HHHHHHHHHHHHHHHHh----------CCh---HHHHHHHHH--------------
Confidence 654 322 1 334555444 34555555544432100 000 111111111
Q ss_pred CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc-ccceEEE
Q 011107 330 DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV-SAGGLVI 408 (493)
Q Consensus 330 ~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~v~i 408 (493)
-+| .++.++|+||+++++|..-. -..-|.++|... ++.++ ++|.|++
T Consensus 301 -------------------------~~g---~iivv~~leeai~~~N~~AP-EHLel~~~~p~~---~l~~I~nAGaiFl 348 (425)
T PRK00877 301 -------------------------GQG---AIILVDDLEEAIELSNAYAP-EHLEIQTEDPRA---LLDRIRNAGAIFL 348 (425)
T ss_pred -------------------------hCC---EEEEECCHHHHHHHHHhhCh-HheeehhCCHHH---HHhhcCccceecc
Confidence 011 13467999999999998432 235688888753 44544 6899999
Q ss_pred cCCCccc-------CCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 409 NDTAVHL-------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 409 N~~~~~~-------~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
..++.-. .++-+| .+|+.|+.+..+...|.+.-++.
T Consensus 349 G~~tp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsV~~F~K~~s~~ 391 (425)
T PRK00877 349 GPYTPESLGDYAAGPNHVLP-----TSGTARFSSGLSVYDFLKRSSVI 391 (425)
T ss_pred CCCCchhhhhcccCCCcccC-----CCcceeecCCccHHHhccceeEE
Confidence 7644311 222233 35677888888899998876654
|
|
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.54 E-value=3 Score=41.88 Aligned_cols=248 Identities=18% Similarity=0.159 Sum_probs=133.3
Q ss_pred CCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhhcCCCcEEEEe-CChHhH
Q 011107 110 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVE-GAVAET 188 (493)
Q Consensus 110 ~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~alP~g~v~vv~-g~~~~~ 188 (493)
+-....++.|+--|++..|.-|| ++.+...+||-.+|..=|+--+|-.......|+.+ +.+ |+=.+.. |+....
T Consensus 84 Gv~~g~~~~Pi~rvG~YVPa~~p-StvLM~~iPAkvAGV~~Iv~~TPp~~i~p~vL~aa-~~~---Gv~eIy~vGGAQAI 158 (368)
T PRK13769 84 GVLRSVFWKPVRRAALYVPARYV-STLVMLAVPARAAGVEEIYVVTPPRGVTGELLAVA-KEL---GVKGVLAIGGPHGL 158 (368)
T ss_pred CeEEEEEEeeeeeeEEEeccchH-HHHHHhhccHhhcCCCeEEEeCCCCCCCHHHHHHH-HHc---CCCeeecccCHHHH
Confidence 34456789999999999996555 44555678999999865443322111222222211 111 2222222 344444
Q ss_pred HHHHhC-CCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHHHHhhcccCCCCcccCCCEEE
Q 011107 189 SALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 267 (493)
Q Consensus 189 ~~L~~~-~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~ 267 (493)
.++.-. +||+|+=.|+.-+...=...... .-+=+-.|-.--+||-++||.+..+.+++.-+= + .. ..+.++
T Consensus 159 Aa~a~gt~VDkIvGPGN~yV~~AK~~v~g~--V~ID~~AGPSEvlViAD~a~p~~vAaDLLaQAE-H-~~----~a~~iL 230 (368)
T PRK13769 159 AYAVFHMGVDMVAGPGGLYVQAAKYVLSQY--VGIDGIEGPTELVVYAEGVPPEVAVRGALAQLE-H-GP----TSFAYL 230 (368)
T ss_pred HHHhcCCCcCEEECCCcHHHHHHHHHHhCC--cCCCCcCCCcceEEEcCCCCHHHHHHHHHHHhh-c-CC----CCcEEE
Confidence 455543 79999888876442111001111 111111233334566667898888888777653 2 21 234455
Q ss_pred EcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCeEEeCCccCCCCceeeceEecCCCCC
Q 011107 268 TTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRD 347 (493)
Q Consensus 268 V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptvl~~v~~~ 347 (493)
|..+ +++.++..+++.+. +.. . .|
T Consensus 231 vT~s--~~la~~V~~~v~~~--------------------------~~~----~---~~--------------------- 254 (368)
T PRK13769 231 LSTD--AELLKAAEEIYRRE--------------------------RTS----S---MG--------------------- 254 (368)
T ss_pred EECC--HHHHHHHHHHHHHH--------------------------HHh----c---CC---------------------
Confidence 5555 45555555544321 110 0 00
Q ss_pred CcccccccccceeeeEeeCCHHHHHHHHhcC-CCCcEEEEecCCHHHHHHHHhhc-ccceEEEcCCCcc-----cCCCCC
Q 011107 348 SLIMSEEIFGPLLPILTVDKIEDSFDIINSG-TKPLAAYLFTNNKKLKQQFVETV-SAGGLVINDTAVH-----LAVHSL 420 (493)
Q Consensus 348 ~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~-~~gl~a~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~~-----~~~~~~ 420 (493)
- ..++.++|++|+++++|.- +-.|. |.+.+ .+..++ ++|.|+++.+... ..++-+
T Consensus 255 ----------~-~~iivv~~leeai~~~N~~APEHLe--l~~~~-----~~~~~i~nAGsiFl~~p~a~GDY~aGpNHvL 316 (368)
T PRK13769 255 ----------P-LEVRKVAGVEEAVRFIDEIAPEHLE--VWGRR-----EVAYRVRNVGAVSVNMPSPYLDYVAGISHVL 316 (368)
T ss_pred ----------C-CeEEEECCHHHHHHHHHhhChHheE--eeCcH-----HHHhhCCccCChhcCCchhhhccccCCCCcC
Confidence 0 2356789999999999984 33343 34422 244444 6899999653211 022223
Q ss_pred CccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 421 PFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 421 p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
|- +|..|+.|..+...|.+.-++.
T Consensus 317 PT-----~G~AR~~sgLsv~~FlK~~t~~ 340 (368)
T PRK13769 317 PT-----GGTARWRGIITPLTFMKPIGVA 340 (368)
T ss_pred CC-----CcceeccCCCcHHHcccceeEE
Confidence 33 4667777778888888766543
|
|
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.45 E-value=3.7 Score=42.21 Aligned_cols=285 Identities=17% Similarity=0.197 Sum_probs=150.0
Q ss_pred HHHHHHHHHHHhhcCCcccccc--c-ccCCCCceeeeecceEEEEEccCc---hhHHhhhhHHHHHHHhCCEE--EEeCC
Q 011107 84 TSIKSALKELKHWMTPEKAKTS--I-TTFPSSAEIVPEPFGVVLIISPWN---YPFLLSLDPVVGAIAAGNAL--VLKPS 155 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~~~~AL~aGN~V--vlkps 155 (493)
+.++.+.++++.+...+..... . ...+.....++.|+.-|++..|.- ||- +.+..++||-.+|..= ++-|.
T Consensus 82 ~ai~~A~~nI~~fh~~q~~~~~~~~~~~~Gv~~g~~~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPp 160 (431)
T PLN02926 82 EAFDVAYDNIYAFHLAQKSTEKLEVETMPGVRCRRVARPIGAVGLYVPGGTAVLPS-TALMLAVPAQIAGCKTVVLATPP 160 (431)
T ss_pred HHHHHHHHHHHHHHHHhCCCCcceEecCCCeEEEEEEechHHeeEeccCCCCCccH-HHHHhhcchhhcCCCeEEEEECC
Confidence 3445555566655544332211 1 112334567899999999999973 444 4455678999999764 45555
Q ss_pred CC-chHHHHHHHHHHhhhcCCCcEEEEe-CChHhHHHHH---hC--CCCeEEEeCCHHHHHHHHHHHhccccc--hhhh-
Q 011107 156 EV-APASSSLLAKLVGEYMDLSSIRVVE-GAVAETSALL---DQ--KWDKICYTGNSRVARIVMAAAAKHLTP--VLLE- 225 (493)
Q Consensus 156 ~~-~~~~~~~l~~~l~~alP~g~v~vv~-g~~~~~~~L~---~~--~v~~v~ftGs~~~g~~i~~~a~~~~~~--~~~e- 225 (493)
.. .......|+.+ +.+ |+=.+.. |+.....+|. +. +||+|+=.|+.-+...=. ... +.+ |-..
T Consensus 161 ~~~g~i~p~iL~AA-~~~---Gv~eIy~vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~-~v~--G~~~~VgID~ 233 (431)
T PLN02926 161 RKDGSICPEVLYCA-KKA---GVTHILKAGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKM-ILQ--NSEAMVSIDM 233 (431)
T ss_pred CcCCCCCHHHHHHH-HHc---CCCeeeccCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHH-Hhh--CCCCccccCC
Confidence 32 11222223221 211 2222222 4545555554 22 399998888764321100 010 110 1111
Q ss_pred cCCCC--eEEEcCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCC
Q 011107 226 LGGKS--PVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVN 303 (493)
Q Consensus 226 lgG~~--p~iV~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~ 303 (493)
..|.+ -+|-+++||.+.++.+++.-+= ++. . .+.++|..+ +++.+++.+++.+.... +..
T Consensus 234 ~AGPSEvlIiAD~tA~p~~vAaDLLaQAE-Hdp----~-a~aiLvT~s--~~la~~V~~~v~~ql~~----------l~r 295 (431)
T PLN02926 234 PAGPSEVLVIADKTANPVHVAADLLSQAE-HGP----D-SQVVLVAVG--DVDLDAIEEEVEKQCQS----------LPR 295 (431)
T ss_pred CCCCceeEEEeCCCCCHHHHHHHHHHHhc-cCC----C-CcEEEEECC--HHHHHHHHHHHHHHHHh----------CCh
Confidence 12444 3444556899999988887654 222 2 344555554 34555555444432100 000
Q ss_pred HHHHHHHHHHHHHHHhCCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcE
Q 011107 304 SNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLA 383 (493)
Q Consensus 304 ~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~ 383 (493)
.+.++.+.. - -.++.++|++|+++++|.--. -.
T Consensus 296 -------~~i~~~sl~--------------------------------------~-g~iivv~~l~ea~~~~N~~AP-EH 328 (431)
T PLN02926 296 -------GEIASKALG--------------------------------------H-SFIVVARDMAEAISFSNLYAP-EH 328 (431)
T ss_pred -------HHHHHHHHH--------------------------------------C-CEEEEECCHHHHHHHHHhhCh-Hh
Confidence 011111100 0 124567999999999998422 23
Q ss_pred EEEecCCHHHHHHHHhhc-ccceEEEcCCCccc-------CCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 384 AYLFTNNKKLKQQFVETV-SAGGLVINDTAVHL-------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 384 a~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~~~-------~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
.-|.++|.+ .+..++ ++|.|++..++.-. .++-+|- +|..|+.|..+...|.+.-++.
T Consensus 329 Lei~~~~~~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 394 (431)
T PLN02926 329 LIVNVEDAE---SWLDKIDNAGSVFLGRWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 394 (431)
T ss_pred heehhcCHH---HHHhhcCccceeccCCCCchhhhccccCcCcccCC-----CcceeecCCCcHHHhcceeeEE
Confidence 458888875 455555 68999997644311 2222333 4667888888889998866553
|
|
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=95.26 E-value=4 Score=41.52 Aligned_cols=260 Identities=21% Similarity=0.246 Sum_probs=139.1
Q ss_pred CCCceeeeecceEEEEEccCc-hhH-HhhhhHHHHHHHhCCEE--EEeCCCCc-hHHHHHHHHHHhhhcCCCcEEEEe-C
Q 011107 110 PSSAEIVPEPFGVVLIISPWN-YPF-LLSLDPVVGAIAAGNAL--VLKPSEVA-PASSSLLAKLVGEYMDLSSIRVVE-G 183 (493)
Q Consensus 110 ~~~~~~~~~P~GVv~~i~p~n-~P~-~~~~~~~~~AL~aGN~V--vlkps~~~-~~~~~~l~~~l~~alP~g~v~vv~-g 183 (493)
+.....++.|+--|++..|.- +|+ ++.+...+||-.+|..= ++-|.... ......|+-+ +.+ |+=.+.. |
T Consensus 83 G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~aa-~~~---Gv~eiy~vG 158 (390)
T cd06572 83 GVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAILAAA-KLA---GVDEIYKVG 158 (390)
T ss_pred CcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHHHHH-HHc---CCcEEeccC
Confidence 445677899999999999964 333 34445578999999764 44454321 1111222211 111 2222332 4
Q ss_pred ChHhHHHHH---hC--CCCeEEEeCCHHHHHHHHHHHhccccchhhh-cCCCC--eEEEcCCCCHHHHHHHHHHhhcccC
Q 011107 184 AVAETSALL---DQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLE-LGGKS--PVVFDSGINLKVACRRMIMGKWGCN 255 (493)
Q Consensus 184 ~~~~~~~L~---~~--~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~e-lgG~~--p~iV~~daDl~~Aa~~i~~~~~~~~ 255 (493)
+.....+|. +. +||+|+=.|+.-+...= +... ..+-.. ..|.+ -+|-+++||.+..+.+++.-+= |
T Consensus 159 GaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK-~~v~---g~V~ID~~AGPSEvlIiAD~~A~p~~vAaDLLaQAE--H 232 (390)
T cd06572 159 GAQAIAALAYGTETIPKVDKIVGPGNIYVTAAK-RLVS---GDVGIDMPAGPSEVLVIADETANPEFVAADLLSQAE--H 232 (390)
T ss_pred CHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHH-HHhc---CCcCccCCCCCceEEEEeCCCCCHHHHHHHHHhhhc--c
Confidence 555555554 22 39999877765432111 0010 111111 12444 3455556999999988887653 2
Q ss_pred CCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCeEEeCCccCCCCce
Q 011107 256 NGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR 335 (493)
Q Consensus 256 ~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~ 335 (493)
.. . .+.++|..+ .++.++..+.+.+.... +... +.+.+.+. .
T Consensus 233 ~~---~-a~aiLvT~s--~~la~~V~~~v~~ql~~----------l~r~---~~~~~~~~---~---------------- 274 (390)
T cd06572 233 DP---D-SQAILVTTS--EELAEAVEEEVERQLAE----------LPRR---EIAAKSLL---D---------------- 274 (390)
T ss_pred CC---C-CeEEEEECC--HHHHHHHHHHHHHHHHh----------CCcH---HHHHHHHH---h----------------
Confidence 21 2 334555554 44555555544432210 0000 01111111 0
Q ss_pred eeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc-ccceEEEcCCCcc
Q 011107 336 IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV-SAGGLVINDTAVH 414 (493)
Q Consensus 336 ~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~~ 414 (493)
+| .++.++|++|+++++|..-. -..-|.++|... +..++ ++|.|++..++.-
T Consensus 275 --------------------~g---~ii~~~~~~eai~~~N~~AP-EHLel~~~~~~~---~l~~i~nAGsiFlG~~tp~ 327 (390)
T cd06572 275 --------------------YG---AIILVDDLEEAIELANEYAP-EHLELQTEDPEE---LLEKIRNAGSIFLGPYTPE 327 (390)
T ss_pred --------------------CC---EEEEECCHHHHHHHHHhhch-hhheeHhcCHHH---HHhhCccceEEeecCCCch
Confidence 11 13467999999999998432 245678888764 45555 6899999875431
Q ss_pred c-------CCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 415 L-------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 415 ~-------~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
. .++-+|. +|..|+.+..+...|.+.-++.
T Consensus 328 a~GDY~aGpNHvLPT-----~G~Ar~~sgL~v~~F~K~~s~~ 364 (390)
T cd06572 328 ALGDYAAGPNHVLPT-----GGTARFYSGLSVDDFLKRITVQ 364 (390)
T ss_pred hhhccccCCCCccCC-----CcceeecCCCCHHHheecceeE
Confidence 1 2233444 4566777777888888876653
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.98 E-value=5 Score=41.17 Aligned_cols=285 Identities=16% Similarity=0.176 Sum_probs=150.2
Q ss_pred HHHHHHHHHHHhhcCCccccc--cc--ccCCCCceeeeecceEEEEEccC---chhHHhhhhHHHHHHHhCCEE--EEeC
Q 011107 84 TSIKSALKELKHWMTPEKAKT--SI--TTFPSSAEIVPEPFGVVLIISPW---NYPFLLSLDPVVGAIAAGNAL--VLKP 154 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~~~~AL~aGN~V--vlkp 154 (493)
+-++.++++++.+...+.... .. ...+.....++.|+.-|++..|. -||- +.+...+||-.+|..= ++-|
T Consensus 76 ~ai~~A~~nI~~fh~~q~~~~~~~~~~~~~Gv~~g~~~~Pl~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TP 154 (426)
T PRK12447 76 EDIRFAQDQVRRFAEAQRDSLQDLEVETLPGVILGHRNIPVNSVGCYVPGGRYPLVA-SAHMSVLTAKVAGVKRVIACTP 154 (426)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCceEEecCCCeEEEEEEeehheEEEEeCCCCCcchH-HHHHhhcchhhcCCCeEEEEeC
Confidence 344555566666554332211 11 11233456789999999999995 3444 4445678999999764 4445
Q ss_pred CCCchHHHHHHHHHHhhhcCCCcEEEEe-CChHhHHHHH---hC--CCCeEEEeCCHHHHHHHHHHHhccccchhhh-cC
Q 011107 155 SEVAPASSSLLAKLVGEYMDLSSIRVVE-GAVAETSALL---DQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLE-LG 227 (493)
Q Consensus 155 s~~~~~~~~~l~~~l~~alP~g~v~vv~-g~~~~~~~L~---~~--~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~e-lg 227 (493)
..........|+.+ +.+ |+=.+.. |+.....+|. .. +||+|+=.|+.-+...=.. .. ..|-.. ..
T Consensus 155 p~~~~i~p~iL~Aa-~~~---Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~-v~---g~V~ID~~A 226 (426)
T PRK12447 155 PFPGEPPPAIVAAM-HLA---GADEIYVLGGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQ-LF---GRVGIDLFA 226 (426)
T ss_pred CCCCCCCHHHHHHH-HHc---CCCeehhcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHH-hc---CccCcCCCC
Confidence 43211222223221 111 2222222 4545555554 23 3999988887644211100 10 112111 12
Q ss_pred CCC--eEEEcCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHH
Q 011107 228 GKS--PVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSN 305 (493)
Q Consensus 228 G~~--p~iV~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~ 305 (493)
|.+ -+|-+++||.+..+.+++.-+= ++. . .+.++|..+ +++.+++.+++.+.... + .+
T Consensus 227 GPSEvlViAD~~Anp~~vAaDLLaQAE-Hd~----~-a~~iLvT~s--~~la~~V~~~v~~ql~~----------l-~r- 286 (426)
T PRK12447 227 GPTETLVIADDTADPELVATDLLGQAE-HGP----N-SPAVLITTS--RKLAEEVLAEIERLLAI----------L-PT- 286 (426)
T ss_pred CCceeEEEeCCCCCHHHHHHHHHHHhc-cCC----C-CceEEEECC--HHHHHHHHHHHHHHHHh----------C-CH-
Confidence 444 3455556899999988887654 322 2 334555444 34555555544432100 0 00
Q ss_pred HHHHHHHHHHHHHhCCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEE
Q 011107 306 HFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 385 (493)
Q Consensus 306 ~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~ 385 (493)
.+.+++-++ -+| .++-++|++|+++++|..-. -..-
T Consensus 287 -~~i~~~sl~---------------------------------------~~g---~ii~v~~l~ea~~~~N~~AP-EHLe 322 (426)
T PRK12447 287 -ADVASAAWR---------------------------------------DYG---EVILCDDLEEMVAEADRYAS-EHVQ 322 (426)
T ss_pred -HHHHHHHHH---------------------------------------hCC---EEEEECCHHHHHHHHHhhCh-Hhee
Confidence 111111111 011 13467999999999998432 2345
Q ss_pred EecCCHHHHHHHHhhc-ccceEEEcCCCccc-------CCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 386 LFTNNKKLKQQFVETV-SAGGLVINDTAVHL-------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 386 v~t~d~~~~~~~~~~l-~~g~v~iN~~~~~~-------~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
|.++|.. .++.++ ++|.|++..++.-. .++-+| .+|+.|+.+..+...|.+.-++.
T Consensus 323 l~~~~~~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLP-----T~G~Ar~~sgLsv~~FlK~~s~~ 386 (426)
T PRK12447 323 VMTEDPD---WFLENMTNYGALFLGERTNVAYGDKVIGTNHVLP-----TSGAARYTGGLWVGKFLKTVTYQ 386 (426)
T ss_pred ehhCCHH---HHHhhcCccceeccCCCCchhhhhcccCCCcccC-----CCcceeecCCCcHHHhccceeEE
Confidence 8888875 455555 58999997644311 222233 35667888888889998876653
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=93.72 E-value=0.16 Score=59.60 Aligned_cols=101 Identities=16% Similarity=0.172 Sum_probs=72.1
Q ss_pred CCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhhcCCCcEEEEeCChHhH
Q 011107 109 FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAET 188 (493)
Q Consensus 109 ~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~alP~g~v~vv~g~~~~~ 188 (493)
.++++.....|.|+|+++.+-. ...+..+..+|++||.+|+..++.. . .+...+|+.+.+.+.-. ..
T Consensus 1177 TGE~N~l~l~pRg~vLcl~~~~---~~~~~Ql~Aala~Gn~~v~~~~~~~---~-----~~~~~Lp~~v~~~v~~~--~~ 1243 (1318)
T PRK11809 1177 TGERNTYTLLPRERVLCLADTE---QDALTQLAAVLAVGSQALWPDDALH---R-----ALVAALPAAVQARIQLA--KD 1243 (1318)
T ss_pred CCCcceeeccCCCcEEEeCCCH---HHHHHHHHHHHHhCCEEEEeCCchh---H-----HHHHhccHHHHhHhhhc--cc
Confidence 4678889999999999998843 3578899999999999988655432 1 12234888877765221 11
Q ss_pred HHHHhCCCCeEEEeCCHHHHHHHHHHHhccccch
Q 011107 189 SALLDQKWDKICYTGNSRVARIVMAAAAKHLTPV 222 (493)
Q Consensus 189 ~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~ 222 (493)
..+...+++.|.|-|.....+.+.+..+++..++
T Consensus 1244 ~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~GaI 1277 (1318)
T PRK11809 1244 WQLADQPFDAVLFHGDSDQLRALCEQVAQRDGPI 1277 (1318)
T ss_pred cccccCCccEEEEeCCHHHHHHHHHHHhcCCCCe
Confidence 2222346999999999999999988877764443
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 493 | ||||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 1e-110 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 1e-107 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 3e-69 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 8e-68 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 7e-35 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 3e-34 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 5e-34 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 3e-33 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 3e-33 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 3e-33 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 1e-32 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 5e-31 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 5e-31 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 1e-30 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 2e-29 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 4e-29 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 6e-29 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 7e-29 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 9e-29 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 9e-29 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 1e-28 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 1e-28 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 2e-28 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 3e-28 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 5e-28 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 5e-28 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 6e-28 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 7e-28 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 2e-27 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 2e-27 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 3e-27 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 3e-27 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 3e-27 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 3e-27 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 4e-27 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 6e-27 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 8e-27 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 1e-26 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 2e-26 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-26 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 2e-26 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 3e-26 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 4e-26 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 5e-26 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 5e-26 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 8e-26 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 8e-26 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 8e-26 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 1e-25 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 2e-25 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 3e-25 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 3e-25 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 8e-25 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 4e-24 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 5e-24 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 6e-24 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 9e-24 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 2e-23 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 6e-23 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 1e-22 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 2e-21 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 4e-21 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 8e-21 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 1e-20 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 2e-20 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 2e-20 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 6e-20 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 7e-20 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 3e-19 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 5e-18 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 1e-17 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 1e-17 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 2e-16 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 4e-16 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 1e-15 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 1e-14 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 8e-14 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 2e-12 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 5e-12 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 3e-10 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 3e-09 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 7e-09 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 8e-09 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 9e-09 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 6e-08 |
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 708 bits (1830), Expect = 0.0
Identities = 196/450 (43%), Positives = 288/450 (64%), Gaps = 7/450 (1%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
VK R F+SG+T+ +R+ QL++L +++ E+E ++V AL DL K E + EV +
Sbjct: 24 VKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYV 83
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
I+ +++L W E + + T I EP GVVL+I WNYPF L++ P+VG
Sbjct: 84 LEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVG 143
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGNA+VLKPSE++ +SLLA ++ +Y+D V+ G V ET+ LL +++D I YT
Sbjct: 144 AIAAGNAVVLKPSELSENMASLLATIIPQYLDKDLYPVINGGVPETTELLKERFDHILYT 203
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
G++ V +I+M AAAKHLTPV LELGGKSP D +L VACRR+ GK+ N+GQ C++
Sbjct: 204 GSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKF-MNSGQTCVA 262
Query: 263 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+I+ +++E LK L+ FYG++ +S+D RI+++ HF R+ L++ K
Sbjct: 263 PDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEG----QK 318
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
+ +GG D IAPT+L DV S +M EEIFGP+LPI+ V +E++ IN KPL
Sbjct: 319 VAYGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPL 378
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 442
A Y+F++N K+ ++ + S+GG+ ND VH+ +HSLPFGGV SGMG+YHGK SF+ F
Sbjct: 379 ALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETF 438
Query: 443 SHKKAVLSRGFIGD--VPVRYPPYTKGKLR 470
SH+++ L R + D + VRYPP +
Sbjct: 439 SHRRSCLVRPLMNDEGLKVRYPPSPAKMTQ 468
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 602 bits (1554), Expect = 0.0
Identities = 143/430 (33%), Positives = 229/430 (53%), Gaps = 8/430 (1%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
+ FA+ T G+R L+ L + + + + AL +DL KP+ + E+ +
Sbjct: 34 FSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAV 93
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
I AL L W+ P + PS +V EP+GV II P+NYP L+L P++G
Sbjct: 94 LHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIG 153
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AI GN ++KPSE P +S+++ K++ E + V++G E S LL +D I +T
Sbjct: 154 AIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYVAVIQGGRDENSHLLSLPFDFIFFT 213
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
G+ V ++VM AAAKHLTPV+LELGGK P++ +L +++ GK+ N+GQ I+
Sbjct: 214 GSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKF-INSGQTXIA 272
Query: 263 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD++ LLE L ++ + ++V RL LL+ + G+
Sbjct: 273 PDYLYVHYSVKDALLERLVERVKTELPEIN----STGKLVTERQVQRLVSLLEATQ--GQ 326
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG-TKP 381
++ G + D +K ++ T++ V + +MSEE+FGP+LP+L D + + D +N KP
Sbjct: 327 VLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKP 386
Query: 382 LAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDV 441
LA Y+F + + + + + +G +N +H LPFGG+ SGMG YHG FS+
Sbjct: 387 LAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLT 446
Query: 442 FSHKKAVLSR 451
F+HKK+V
Sbjct: 447 FTHKKSVRIV 456
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 212 bits (543), Expect = 3e-63
Identities = 104/436 (23%), Positives = 190/436 (43%), Gaps = 32/436 (7%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R + + ++L E +IV+ L ++ ++++ E+ L K
Sbjct: 74 RSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANL-EITLAGNITK--------ESASF 124
Query: 101 KAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPS 155
+ PS+ + GVV +ISPWN+P LS+ V A+A GNA+V+KP+
Sbjct: 125 PGRVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPA 184
Query: 156 EVAPASSSLLAKLVGEYMDLSS--IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIV 211
P + ++ + E + + I V GA +E I +TG++ V R V
Sbjct: 185 SDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRV 244
Query: 212 M--AAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIIT 268
A + V LELGG +P VV ++ A + +G + + GQ C+S + +I
Sbjct: 245 GELAINGGPMKTVALELGGNAPFVVLADA-DIDAAAQAAAVGAFL-HQGQICMSINRVIV 302
Query: 269 TKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHG 326
+ LE ++N +P + ++N + + L + ++ K G +
Sbjct: 303 DAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVE 362
Query: 327 GERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 386
G + + P + DV D I EEIFGPL+ +L D + ++ N+ L+A +
Sbjct: 363 GPIEGR--LVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAV 420
Query: 387 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 446
++ + QF + +G + IND V+ H + FGG + SG+G ++G ++ + F+ +
Sbjct: 421 WSKDIDRAAQFALQIDSGMVHINDLTVNDEPH-VMFGGSKNSGLGRFNGDWAIEEFTTDR 479
Query: 447 AVLSRGFIGDVPVRYP 462
+ I
Sbjct: 480 WI----GIKRSAENLY 491
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 208 bits (533), Expect = 4e-62
Identities = 92/344 (26%), Positives = 161/344 (46%), Gaps = 28/344 (8%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL--------- 168
EP G+VL ISP+NYP L+ + A+ AGN + KP S LLA+
Sbjct: 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAG 201
Query: 169 VGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 226
V + G +E + Q + I +TG++ + + A + P++LEL
Sbjct: 202 V--------FNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLEL 251
Query: 227 GGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 285
GGK V + +L++ + +I G +G +GQ C + ++ + A +L+E ++ ++
Sbjct: 252 GGKDSAIVLEDA-DLELTAKNIIAGAFG-YSGQRCTAVKRVLVMESVADELVEKIREKVL 309
Query: 286 NFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDV 344
NP + D++ ++++ + L++D G + +R+ N I P L V
Sbjct: 310 ALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGN--LICPILFDKV 367
Query: 345 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 404
D + EE FGP+LPI+ V +E++ +I N L A +FTN+ E + G
Sbjct: 368 TTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVG 427
Query: 405 GLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+ IN+ + PF G ++SG G K+S + + K+V
Sbjct: 428 TVHINNKTQRGTDN-FPFLGAKKSGAGIQGVKYSIEAMTTVKSV 470
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 207 bits (530), Expect = 2e-61
Identities = 98/434 (22%), Positives = 190/434 (43%), Gaps = 29/434 (6%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R + L+ L+E DI+ + ++ ++S+I E+ + A+ +
Sbjct: 68 RKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVK 126
Query: 101 KAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPS 155
PS E I P GV+ ISP+N+P LS+ + AIA GN++V KP
Sbjct: 127 -------EVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPD 179
Query: 156 EVAPASSSLLAKLVGEYMDLSS--IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIV 211
S + E+ L + + V+ V E + + I +TG++ V R +
Sbjct: 180 IQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHI 239
Query: 212 MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 270
A + + LELGG +P V ++ A I GK+ + GQ C+ + II +
Sbjct: 240 GEIAGRAFKRMALELGGNNPFAVLSDA-DVDRAVDAAIFGKFI-HQGQICMIINRIIVHQ 297
Query: 271 DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 328
D + +E ++ + + K + ++N + ++++ K G ++ G+
Sbjct: 298 DVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK 357
Query: 329 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 388
R N L P + + +S I E+F P+ I+ +++ D+ N L++ +FT
Sbjct: 358 RVGNVL--TPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFT 415
Query: 389 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
++ + ++F + +G +ND +V+ + + FGG + SG+G + + + F+ K +
Sbjct: 416 SDLEKGEKFALQIDSGMTHVNDQSVNDSPNI-AFGGNKASGVGRFGNPWVVEEFTVTKWI 474
Query: 449 LSRGFIGDVPVRYP 462
I +YP
Sbjct: 475 S----IQKQYRKYP 484
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 206 bits (527), Expect = 7e-61
Identities = 94/344 (27%), Positives = 156/344 (45%), Gaps = 28/344 (8%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL--------- 168
EP GVVL ISP+NYP L+ + A+ GN +V KP+ S + +
Sbjct: 151 EPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEG 210
Query: 169 VGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 226
+ I+VV G + L D I +TG + + A + PV+LEL
Sbjct: 211 I--------IQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVVLEL 260
Query: 227 GGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 285
GGK P V D +LK+ +++ G + +GQ C + + A +L+ ++K +E
Sbjct: 261 GGKDPAIVLDDA-DLKLTASQIVSGAFS-YSGQRCTAIKRVFVQDSVADQLVANIKELVE 318
Query: 286 NFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDV 344
+P + D++ +++ A + L+DD +G ++ G +R N ++PTLL DV
Sbjct: 319 QLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGN--LLSPTLLDDV 376
Query: 345 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 404
+ EE FGP+LPI+ V ++ + N L A +FT + + + G
Sbjct: 377 TPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVG 436
Query: 405 GLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+ IN H PF GV++SG+G K S + ++
Sbjct: 437 TVHINAKTERGPDH-FPFLGVKKSGLGVQGIKPSLLSMTRERVT 479
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 205 bits (523), Expect = 5e-60
Identities = 94/385 (24%), Positives = 163/385 (42%), Gaps = 25/385 (6%)
Query: 96 WMTPEKAKTSITTFPSS-AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKP 154
M I + P P GV + ISPWN+ + + V I GN +VLKP
Sbjct: 148 QMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKP 207
Query: 155 SEVAPASSSLLAKLVGEYMDLSS------IRVVEGAVAETSALL--DQKWDKICYTGNSR 206
+ P ++ +++ + + I V G+ AE L K I +TG+
Sbjct: 208 ASTTPVVAAKFVEVLED-----AGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKD 262
Query: 207 VARIVMAAAAK------HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 260
V + AA HL V++E+GGK VV D +L +A +++ +G +GQ C
Sbjct: 263 VGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFG-FSGQKC 321
Query: 261 ISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKV 319
+ + KD ++LE +N +P + +++ F ++ ++ K
Sbjct: 322 SAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKK 381
Query: 320 SGKIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG 378
G+++ GGE D + I PT++ D+ +++IM EEIFGP++ + + + +I N+
Sbjct: 382 EGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNT 441
Query: 379 TKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYH-GKF 437
L + T N+ +Q G L N V PFGG + SG + G
Sbjct: 442 EYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPD 501
Query: 438 SFDVFSHKKAVLSRGFIGDVPVRYP 462
+ K V S + ++ +
Sbjct: 502 YLALHMQAKTV-SEMYAENLYFQSH 525
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 200 bits (512), Expect = 5e-59
Identities = 109/446 (24%), Positives = 191/446 (42%), Gaps = 28/446 (6%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
D + A V+ + + S R + L ++K R+ DIV A+ +L P S
Sbjct: 46 DVDKA---VEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLS 102
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFL 134
+ +A L +V E GV +I+PWN+P
Sbjct: 103 ERVHYQMGLNHFVAARDALD--------NYEFEERRGDDLVVKEAIGVSGLITPWNFPTN 154
Query: 135 LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS--IRVVEGAVAETSALL 192
+ + A AAG+ +VLKPSE P ++ +LA++ + + + +V G A L
Sbjct: 155 QTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDK-VGVPKGVFNLVNGDGAGVGNPL 213
Query: 193 DQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIM 249
+ K + +TG+ +M AAK V LELGGKSP +V D +++K A +
Sbjct: 214 SEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVLD-DVDIKEAAKATTG 272
Query: 250 GKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFA 308
N GQ C + ++ L LK + NP + + I++ F
Sbjct: 273 KVVN-NTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFD 331
Query: 309 RLSKLLDDDKVSG-KIVHGGERDKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLPIL 363
++ ++ G ++ +GG L PT+ ++V I EEIFGP++ ++
Sbjct: 332 QVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVI 391
Query: 364 TVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFG 423
T + ++++ I N LA Y+ +K+ + ++ AG + IN+ + PFG
Sbjct: 392 TYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEAGRKPDL---PFG 448
Query: 424 GVQESGMGAYHGKFSFDVFSHKKAVL 449
G ++SG+G G + + F K++
Sbjct: 449 GYKQSGLGREWGDYGIEEFLEVKSIA 474
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 200 bits (511), Expect = 1e-58
Identities = 74/346 (21%), Positives = 153/346 (44%), Gaps = 28/346 (8%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV-------G 170
EP GVV I+P+NYP +++ + + GNA+V+KPS P +++ K +
Sbjct: 156 EPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPD 215
Query: 171 EYMDLSSIRVVEGAVAETSALL-DQKWDKICYTGNSRVARIVMAAAA-KHLTPVLLELGG 228
+I ++ E ++ D + + +TG++ V V+ K +ELGG
Sbjct: 216 ------AIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGGVKQYV---MELGG 266
Query: 229 KSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF 287
P V + +L +A ++ G + GQ C + ++ + KL+E + L +
Sbjct: 267 GDPAIVLEDA-DLDLAADKIARGIYS-YAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSL 324
Query: 288 YGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLL--- 342
+P + D+ +++ + + ++D G +++ GG R + PT +
Sbjct: 325 RVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTY-VQPTFVEAPA 383
Query: 343 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 402
D +D ++ E+F P+ + V ++ + ++ N L A +F + ++ V +
Sbjct: 384 DRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLE 443
Query: 403 AGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
G + IND + PFGG ++SG+ ++ + + K +
Sbjct: 444 VGAIYINDMPR-HGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTI 488
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 197 bits (504), Expect = 9e-58
Identities = 106/341 (31%), Positives = 180/341 (52%), Gaps = 19/341 (5%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
EP G+V I+P+N+P LS + AIA GN +V PS AP LAK++ + +
Sbjct: 129 EPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYN 188
Query: 178 I-----RVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKS 230
+ ++ GA + ++K + I +TG+S+V ++ A + LELGG +
Sbjct: 189 VPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVN 246
Query: 231 PV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG 289
P V +L A +I G + GQ CIS I+ + A K +E N+ +
Sbjct: 247 PNIVLKDA-DLNKAVNALIKGSFI-YAGQVCISVGMILVDESIADKFIEMFVNKAKVLNV 304
Query: 290 KNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRD 347
NPL+ K D+ +++ H + K+++ G K++ GG+RDK PT+L +V RD
Sbjct: 305 GNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDKA--LFYPTIL-EVDRD 361
Query: 348 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 407
+++ E F P++PI+ ++ E+ DI NS L + +FTN+ +F E + GG+V
Sbjct: 362 NILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVV 420
Query: 408 INDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
IND+++ ++PFGGV++SG+G K++ + S+ K +
Sbjct: 421 INDSSL-FRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTI 460
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 197 bits (502), Expect = 3e-57
Identities = 103/447 (23%), Positives = 198/447 (44%), Gaps = 29/447 (6%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
DA+ A + + F + KT S R+ ++ ++++ +R D+ + ++ P +
Sbjct: 64 DADKA---INAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMA 120
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFL 134
+ A + I++ +K + ++ A + + GVV +I+PWN+P
Sbjct: 121 LNAQTATGSSHIRNFIK----AYKEFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMN 176
Query: 135 LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS--IRVVEGAVAETSALL 192
V+ A+ AG +VLKPSE+AP S+ L A+++ E L S ++ G A + L
Sbjct: 177 QVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDE-AALPSGVFNLINGDGANVGSYL 235
Query: 193 DQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIM 249
+ I +TG++R + + A+ L V LELGGK ++F ++
Sbjct: 236 SAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFA-DADIDAL----QR 290
Query: 250 GKWGC--NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNH 306
G C N+GQ+C +P ++ + K +++ K+ E ++ + +V+
Sbjct: 291 GVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQ 350
Query: 307 FARLSKLLDDDKVSG-KIVHGGERDKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLP 361
+ ++ L+ G +V GG + + PT+ DV I EEIFGP+L
Sbjct: 351 YDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLS 410
Query: 362 ILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP 421
+L + +++ + N L Y+ + ++ ++ V +G + +N +
Sbjct: 411 LLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNGHELPGGS---Y 467
Query: 422 FGGVQESGMGAYHGKFSFDVFSHKKAV 448
FGGV+ SG G + F KA+
Sbjct: 468 FGGVKFSGRAREGGLWGIKEFLDTKAI 494
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 193 bits (492), Expect = 9e-56
Identities = 86/352 (24%), Positives = 155/352 (44%), Gaps = 22/352 (6%)
Query: 113 AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY 172
E P G ++I+PWN+P + +VG +A GN ++ KP+E A + + ++ E
Sbjct: 167 NESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHE- 225
Query: 173 MDLSS------IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAK------H 218
+ + + G E A L + I +TG+ V + AA +
Sbjct: 226 ----AGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTW 281
Query: 219 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLE 278
+E GGK+ ++ D + +A +++ +G GQ C + +I T+ +LE
Sbjct: 282 FKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYG-FQGQKCSAASRLILTQGAYEPVLE 340
Query: 279 SLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK-LRIA 337
+ E E+ DL +V++ ++ ++ K G++V GG+R + + IA
Sbjct: 341 RVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIA 400
Query: 338 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397
PT+ +VP + I EEIFGP+L ++ V ++ ++ N L +++ ++ +
Sbjct: 401 PTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWA 460
Query: 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF-DVFSHKKAV 448
G L N V PFGG + SG A G + +F KAV
Sbjct: 461 RREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAV 512
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 192 bits (490), Expect = 1e-55
Identities = 117/470 (24%), Positives = 194/470 (41%), Gaps = 51/470 (10%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGW-------RVSQLKSLMKMLNEREPDIVDALRQDL 67
D +AA V R F +G W R + + + +KML ER+ L +
Sbjct: 47 DVDAA---VAAARAAFDNG-----PWPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAET 98
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
+P ++ + T + + EP GVV I
Sbjct: 99 GQPPTIIETMHWMGSMGAMNYFAG----AADKVTWTETRTGSYGQSIVSREPVGVVGAIV 154
Query: 128 PWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAV-- 185
WN P L+++ + A+ AG +VLKP+ P +++ LA++ E + + EG +
Sbjct: 155 AWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAE------VGLPEGVLSV 208
Query: 186 ----AETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGI 238
ET L + D +TG+S V R V AA+ L P LELGGKS ++ +
Sbjct: 209 VPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIILEDV- 267
Query: 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK-D 297
+L A M+ N GQ C++ I+ + +++ ++ N + P +
Sbjct: 268 DLAAAIPMMVFSGVM-NAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQ 326
Query: 298 LSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---IAPTLLLDVPRDSLIMSE 353
+ +++ R+ + G ++V GG R + I PT+ DV I E
Sbjct: 327 IGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQE 386
Query: 354 EIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAV 413
EIFGP+L I+ D ED+ I N LA ++T + + + + G IN A
Sbjct: 387 EIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYAF 446
Query: 414 HLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPP 463
PFGG + SG+G +G + F+ +K+VL +P+ Y
Sbjct: 447 DPGS---PFGGYKNSGIGRENGPEGVEHFTQQKSVL-------LPMGYTV 486
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 186 bits (474), Expect = 3e-53
Identities = 114/370 (30%), Positives = 183/370 (49%), Gaps = 32/370 (8%)
Query: 115 IVPEPFGVVLIISPWNYPFLLS---LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE 171
++ EP GVV +I+PWNYP L++ + P A+AAG A +LKPSE+A + L ++ E
Sbjct: 147 VLREPIGVVGLITPWNYPMLMATWKVAP---ALAAGCAAILKPSELASLTCLELGEICKE 203
Query: 172 YMDLSS------IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVL 223
+ ++ G E A L DK+ +TG+S +M AAA+ + PV
Sbjct: 204 -----VGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVS 258
Query: 224 LELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKN 282
LELGGKSP VVF+ +L A I G + NGQ C + +I + A + L +
Sbjct: 259 LELGGKSPLVVFEDV-DLDKAAEWAIFGCFW-TNGQICSATSRLILHESIATEFLNRIVK 316
Query: 283 ELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---IA 337
++N +PLE L +V+ + ++ K + + K G I+ GG R ++ + I
Sbjct: 317 WIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIE 376
Query: 338 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397
PT++ DV + I EE+FGP+L + T E++ D+ N L A + +N+ + ++
Sbjct: 377 PTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERV 436
Query: 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDV 457
+ AG + +N + P+GGV+ SG G G++ D + K V I +
Sbjct: 437 TKAFKAGIVWVNCS--QPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQY--ISEE 492
Query: 458 PVR-YPPYTK 466
P Y P K
Sbjct: 493 PWGWYQPPAK 502
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 185 bits (473), Expect = 3e-53
Identities = 92/345 (26%), Positives = 159/345 (46%), Gaps = 19/345 (5%)
Query: 115 IVPEPFGVVLIISPWNYPFLLS---LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE 171
I +P GVV I+PWNYP +++ L P A+AAGN +VLKPSE+ P ++ LA+L +
Sbjct: 155 IRRDPLGVVASIAPWNYPLMMAAWKLAP---ALAAGNCVVLKPSEITPLTALKLAELAKD 211
Query: 172 YMDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGK 229
+ ++ G L K + TG+ +++ A + +ELGGK
Sbjct: 212 IFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGK 271
Query: 230 SP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFY 288
+P +VFD +++ + + N GQ C + I K L+E L +
Sbjct: 272 APVIVFDDA-DIEAVVEGVRTFGY-YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLK 329
Query: 289 GKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG--KIVHGGERDKNK-LRIAPTLLLDV 344
P + +L + + H R+ K +++ K +G K++ GGE+ K APTLL
Sbjct: 330 SGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGA 389
Query: 345 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 404
+D I+ +E+FGP++ + D E + N LA+ ++T + + + G
Sbjct: 390 LQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYG 449
Query: 405 GLVINDTAVHLAVHS-LPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+N H + S +P GG + SG G + + ++ + V
Sbjct: 450 CTWVNT---HFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHV 491
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 183 bits (468), Expect = 2e-52
Identities = 80/345 (23%), Positives = 155/345 (44%), Gaps = 19/345 (5%)
Query: 115 IVPEPFGVVLIISPWNYPFLLS---LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE 171
I +P G+V I+PWNYP ++ L P AI GN +V KPSE P ++ LA+L+ +
Sbjct: 157 IRRDPIGIVGSIAPWNYPLMMMAWKLAP---AIGGGNTVVFKPSEQTPLTALKLARLIAD 213
Query: 172 YMDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGK 229
+ + V+ G L K + TG+ + V+AAAAK + LELGGK
Sbjct: 214 ILPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGGK 273
Query: 230 SP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFY 288
+P +V+ +L+ + + N GQ C + I KL+ L + +
Sbjct: 274 APVIVYGDA-DLEAVVNGIRTFGY-YNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIR 331
Query: 289 GKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG--KIVHGGERDKNK-LRIAPTLLLDV 344
+++ ++ +++ R++ ++ +I GG ++ PT++
Sbjct: 332 YNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGA 391
Query: 345 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 404
++ I+ E+FGP++ + +D+ N LA+ ++T + + + G
Sbjct: 392 TQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYG 451
Query: 405 GLVINDTAVHLAVHS-LPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
IN H + + +P GG+++SG G ++ + ++ + +
Sbjct: 452 CTWINT---HFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHI 493
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 181 bits (461), Expect = 2e-51
Identities = 91/349 (26%), Positives = 172/349 (49%), Gaps = 23/349 (6%)
Query: 115 IVPEPFGVVLIISPWNYPFLLS---LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE 171
IV EP GVV I+PWNYP L + + P A+A G +LV+KPSE+ P ++ + +L+ E
Sbjct: 166 IVKEPVGVVTQITPWNYPLLQASWKIAP---ALATGCSLVMKPSEITPLTTIRVFELMEE 222
Query: 172 YMDLSS--IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELG 227
+ I ++ GA +E ++ + D + +TG + +M AA ++T + LELG
Sbjct: 223 -VGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELG 281
Query: 228 GKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN 286
GK+P ++FD + ++A + + G + + GQ C + I+ K ++L + ++
Sbjct: 282 GKNPNIIFDDA-DFELAVDQALNGGYF-HAGQVCSAGSRILVQNSIKDKFEQALIDRVKK 339
Query: 287 FYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR-----IAPT 339
N ++ ++ ++++ H ++ +D K G I GG+R PT
Sbjct: 340 IKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPT 399
Query: 340 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 399
++ + I+ EE+FGP++ + + +++ + N LA +F+ + Q+
Sbjct: 400 VITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVAN 459
Query: 400 TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+ G + IND H P+GG ++SG+G GK + + K +
Sbjct: 460 KLKLGTVWINDF--HPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHI 506
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 180 bits (459), Expect = 3e-51
Identities = 92/439 (20%), Positives = 173/439 (39%), Gaps = 39/439 (8%)
Query: 29 TFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKS 88
+ + + R L + L E E ++ + ++ K L S EV
Sbjct: 38 LYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKL-LSESKEEVE------LC 90
Query: 89 AL------KELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
+ P K + +A + + GV++ PWN+P +
Sbjct: 91 VSICNYYADHGPEMLKPTKLNSD----LGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAP 146
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLV-------GEYMDLSSIRVVEGAVAETSALL-DQ 194
GN ++LK + P S++L AK++ G + + + + ++ D
Sbjct: 147 NFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSL------INLYPSYDQLADIIADP 200
Query: 195 KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWG 253
+ + TG+ R V AA K+L +ELGG +V D + +V + +
Sbjct: 201 RIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDDA-DPQVLRNVLNDARTY 259
Query: 254 CNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSK 312
N+GQ C S II K ++L LKN N +PLE+ L + + +L
Sbjct: 260 -NDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEA 318
Query: 313 LLDDDKVSG-KIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED 370
+ + +G K+ + D PT+L D+ +D+ + +E+FGP+ + V+
Sbjct: 319 QVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNA 378
Query: 371 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGM 430
+ + N + L + + ++ ++ + G VIN + LPFGG+++SG
Sbjct: 379 AIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWITSGE--LPFGGIKKSGY 436
Query: 431 GAYHGKFSFDVFSHKKAVL 449
G F ++ V+
Sbjct: 437 GRELSGLGLMAFVNEHLVI 455
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 180 bits (458), Expect = 3e-51
Identities = 103/447 (23%), Positives = 177/447 (39%), Gaps = 43/447 (9%)
Query: 29 TFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKS 88
F K S R L+ + + L ++ + +++ KP ++ + EV KS
Sbjct: 41 GFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP-IKQARAEVT------KS 93
Query: 89 AL------KELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
A + + PE A I P GV+L I PWN+P L V
Sbjct: 94 AALCDWYAEHGPAMLNPEPTLVE----NQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVP 149
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLV-------GEYMDLSSIRVVEGAVAETSALL-DQ 194
+ AGN+ +LK + + ++A+++ G Y V S ++ D
Sbjct: 150 ILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVY------GWVNANNEGVSQMINDP 203
Query: 195 KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWG 253
+ + TG+ R + A A L +LELGG P +V + +L++A + + G++
Sbjct: 204 RIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDA-DLELAVKAAVAGRYQ 262
Query: 254 CNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSK 312
N GQ C + I + A + +PL + DL + + L +
Sbjct: 263 -NTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQ 321
Query: 313 LLDDDKVSG-KIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED 370
+ G +++ GGE+ A T+L DV D +E+FGP+ I
Sbjct: 322 QVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAH 381
Query: 371 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGM 430
+ + N L+A +FT + L + + GG+ IN + A + FGGV++SG
Sbjct: 382 ALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSASDAR--VAFGGVKKSGF 439
Query: 431 GAYHGKFSFDVFSHKKAVLSRGFIGDV 457
G F F + + V + V
Sbjct: 440 GRELSHFGLHEFCNVQTV----WKNRV 462
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 180 bits (460), Expect = 5e-51
Identities = 107/351 (30%), Positives = 169/351 (48%), Gaps = 30/351 (8%)
Query: 115 IVPEPFGVVLIISPWNYPFLLS---LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE 171
++ EP GVV II+PWN+PF+++ + AI +G +VLKPSE +S LA+L E
Sbjct: 157 VLREPVGVVGIITPWNFPFIIASERVPW---AIGSGCTVVLKPSEFTSGTSIRLAELARE 213
Query: 172 -------YMDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPV 222
VV G +L + D + +TG+ RV + AA+ + V
Sbjct: 214 AGIPDGV------FNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVKRV 267
Query: 223 LLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLK 281
LELGGK P +VF +L A + G + N GQ CIS ++ + L+E L
Sbjct: 268 GLELGGKGPQIVFADA-DLDAAADGIAYGVYH-NAGQCCISGSRLLVQEGIRDALMERLL 325
Query: 282 NELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK--LRIA 337
+ +PL + + +++ H ++ + SG +++ GGER + L A
Sbjct: 326 DISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYA 385
Query: 338 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397
PT+ V D I EEIFGP+L LT +++ + N+ L+A +++ N + Q
Sbjct: 386 PTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQT 445
Query: 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+ + AG IN V LP GG ++SG+G G++ FD +S K V
Sbjct: 446 IRRIRAGRCWINS--VIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGV 494
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 179 bits (456), Expect = 9e-51
Identities = 81/347 (23%), Positives = 144/347 (41%), Gaps = 29/347 (8%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL--------- 168
+P GVV + P+N+P L +V A+ AGN +V KPSE+ P + L K
Sbjct: 138 KPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAG 197
Query: 169 VGEYMDLSSIRVVEGAVAETSALLDQKW-DKICYTGNSRVARIVMA-AAAKHLTPVLLEL 226
V + +V+G AL + D + +TG+SR ++ + + + LE+
Sbjct: 198 V--------LNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEM 249
Query: 227 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNEL 284
GG +P VV + +L A +I + + GQ C ++ + + LL L
Sbjct: 250 GGNNPLVVEEVA-DLDAAVYTIIQSAFI-SAGQRCTCARRLLVPQGAWGDALLARLVAVS 307
Query: 285 ENFY-GKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRIAPTL 340
G+ + + +++ + L K + G + + + + P
Sbjct: 308 ATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPG- 366
Query: 341 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 400
+LDV + EE FGPLL ++ + N+ LAA L +++++ +QF+
Sbjct: 367 ILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVE 426
Query: 401 VSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 447
AG + N A PFGG+ SG ++ D ++ A
Sbjct: 427 SRAGIVNWNKQLTGAASS-APFGGIGASGNHRPSAYYAADYCAYPVA 472
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 179 bits (457), Expect = 1e-50
Identities = 100/352 (28%), Positives = 166/352 (47%), Gaps = 30/352 (8%)
Query: 118 EPFGVVLIISPWNYPFLLS---LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMD 174
P G V II+PWN P +LS + P A+A GN +VLKP+E +P +++ LA+++ E D
Sbjct: 161 VPAGPVGIITPWNAPLMLSTWRIAP---ALAFGNTVVLKPAEWSPFTATKLAEILKE-AD 216
Query: 175 LSS--IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKS 230
L +V+G E A L + TG + +IVM AA HL + ELGGKS
Sbjct: 217 LPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKS 276
Query: 231 P-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG 289
P +VF +L+ A ++ + NG+ C + ++ + + +
Sbjct: 277 PALVFADA-DLERALDAVVFQIFS-FNGERCTASSRLLVEEKIFEDFVGKVVERARAIRV 334
Query: 290 KNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---------IAP 338
+PL+ + ++ +++ H R+ ++ K G +++ GGER K R + P
Sbjct: 335 GHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLP 394
Query: 339 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398
T+ + I EEIFGP+L + E++ N LAAY+FT + + +
Sbjct: 395 TVFVGEN-HMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLA 453
Query: 399 ETVSAGGLVIND-TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449
+ AG + +N HL PFGGV+ SG G ++ D ++ K +
Sbjct: 454 LELEAGMVYLNSHNVRHLPT---PFGGVKGSGDRREGGTYALDFYTDLKTIA 502
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 179 bits (457), Expect = 1e-50
Identities = 105/350 (30%), Positives = 165/350 (47%), Gaps = 33/350 (9%)
Query: 118 EPFGVVLIISPWNYPFLLS---LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE--- 171
P GV + I WNYP ++ P A+ AGNA+V KPSE P + +A+++ E
Sbjct: 149 VPLGVCVGIGAWNYPQQIACWKAAP---ALVAGNAMVFKPSENTPLGALKIAEILIEAGL 205
Query: 172 ----YMDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLE 225
V++G +T LL K+ TG+ R V AAAA HL V +E
Sbjct: 206 PKGL------FNVIQGD-RDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTME 258
Query: 226 LGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNEL 284
LGGKSP +VFD +++ A ++G + ++GQ C + + K + LE+LK
Sbjct: 259 LGGKSPMIVFDDA-DIESAVGGAMLGNFY-SSGQVCSNGTRVFVQKKAKARFLENLKRRT 316
Query: 285 ENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR----IAP 338
E +PL+ L +V+ ++ ++ K G ++ GG N + P
Sbjct: 317 EAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQP 376
Query: 339 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398
T+ DV D I EEIFGP++ +L D ++ N+ LA +FT + + V
Sbjct: 377 TVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVV 436
Query: 399 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+ + AG L IN +L +PFGG ++SG G + + + +S K V
Sbjct: 437 DGLEAGTLWIN--TYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTV 484
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 176 bits (449), Expect = 9e-50
Identities = 70/352 (19%), Positives = 143/352 (40%), Gaps = 29/352 (8%)
Query: 116 VPEPFGVVLIISPWNYPFLLSLDPVVG-----AIAAGNALVLKPSEVAPASSSLLAKLVG 170
P G+V II+ +N+P V G A+ GN + K + S + K++
Sbjct: 154 QWNPVGLVGIITAFNFPVA-----VYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIA 208
Query: 171 EYMDLSSI-----RVVEGAVAETSALL-DQKWDKICYTGNSRVARIVMAAAAKHLTPVLL 224
+ ++ + + + G +A+ D++ + + +TG+++V + V + LL
Sbjct: 209 KVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLL 268
Query: 225 ELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNE 283
ELGG + + F+ +L + + G GQ C + + + +++ LK
Sbjct: 269 ELGGNNAIIAFEDA-DLSLVVPSALFAAVG-TAGQRCTTARRLFIHESIHDEVVNRLKKA 326
Query: 284 LENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRIAPTL 340
NP + + + +++ K G +V+GG+ D+ + PT+
Sbjct: 327 YAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTI 386
Query: 341 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 400
+ + D+ I E F P+L + E+ F N + L++ +FT + L + F
Sbjct: 387 VTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKD--LGRIFRWL 444
Query: 401 VSAG---GLV-INDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
G G+V +N + FGG + +G G G ++ + +
Sbjct: 445 GPKGSDCGIVNVNIPTSGAEIG-GAFGGEKHTGGGRESGSDAWKQYMRRSTC 495
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 176 bits (449), Expect = 1e-49
Identities = 96/350 (27%), Positives = 158/350 (45%), Gaps = 28/350 (8%)
Query: 115 IVPEPFGVVLIISPWNYPFLLS---LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE 171
EP GV I PWN+P L+ + P A++ GN +V+KP+E P ++ + L+ E
Sbjct: 155 TRSEPVGVCGQIIPWNFPLLMFLWKIGP---ALSCGNTVVVKPAEQTPLTALHMGSLIKE 211
Query: 172 YMDLSS------IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAK-HLTPV 222
+ + +V G A + DK+ +TG++ V +++ AA K +L V
Sbjct: 212 -----AGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRV 266
Query: 223 LLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLK 281
LELGGKSP +VF +L A G + + GQ CI+ + + + +
Sbjct: 267 SLELGGKSPCIVFADA-DLDNAVEFAHQGVFY-HQGQCCIAASRLFVEESIYDEFVRRSV 324
Query: 282 NELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAP 338
+ + NPL ++ + ++ L++ K G K+ GG NK I P
Sbjct: 325 ERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQP 384
Query: 339 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398
T+ DV D I EEIFGP+ I+ ++D N+ L+A +FTN+
Sbjct: 385 TVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVS 444
Query: 399 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+ +G + +N + PFGG + SG G G++ F ++ K V
Sbjct: 445 SALQSGTVWVN--CYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTV 492
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 176 bits (449), Expect = 1e-49
Identities = 100/362 (27%), Positives = 168/362 (46%), Gaps = 36/362 (9%)
Query: 118 EPFGVVLIISPWNYPFLLS---LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE--- 171
EP GV I WNYPF+++ P A+A GNA+V KPS + P + +LA++ E
Sbjct: 154 EPLGVCAGILAWNYPFMIAAWKCAP---ALACGNAVVFKPSPMTPVTGVILAEIFHEAGV 210
Query: 172 ----YMDLSSIRVVEGAVAETSALLD-QKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 226
+ VV+G S L K+ +TG+ + VM +AK + V LEL
Sbjct: 211 PVGL------VNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLEL 264
Query: 227 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 285
GGKSP ++F L+ A R +M + GQ C + + ++ P+ LE + +
Sbjct: 265 GGKSPLLIFKDC-ELENAVRGALMANFL-TQGQVCTNGTRVFVQREIMPQFLEEVVKRTK 322
Query: 286 NFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR-------I 336
+PL ++ + +++ ++ + K G +++ GGE +
Sbjct: 323 AIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFM 382
Query: 337 APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396
+P +L + D + EEIFGP++ +L D E+ N+ T LA+ +FT + +
Sbjct: 383 SPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHR 442
Query: 397 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGD 456
+ AG IN ++ +PFGG + SG G +G+ + D +S K V+ +GD
Sbjct: 443 VAANLEAGTCYINTY--SISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVE--MGD 498
Query: 457 VP 458
V
Sbjct: 499 VD 500
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 176 bits (448), Expect = 1e-49
Identities = 96/350 (27%), Positives = 160/350 (45%), Gaps = 28/350 (8%)
Query: 115 IVPEPFGVVLIISPWNYPFLLS---LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE 171
EP GV I PWN+P L+ L P A+A GN +V+K +E P ++ +A L+ E
Sbjct: 154 TRHEPVGVCGQIIPWNFPLLMQAWKLGP---ALATGNVVVMKVAEQTPLTALYVANLIKE 210
Query: 172 YMDLSS------IRVVEGAVAET-SALLD-QKWDKICYTGNSRVARIVMAAAAK-HLTPV 222
+ + +V G +A+ + DK+ +TG++ + R++ AA +L V
Sbjct: 211 -----AGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRV 265
Query: 223 LLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLK 281
LELGGKSP ++ ++ A + + N GQ + +D + +E
Sbjct: 266 TLELGGKSPNIIMSDA-DMDWAVEQAHFALFF-NQGQCSCAGSRTFVQEDIYDEFVERSV 323
Query: 282 NELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAP 338
++ NP +SK + V+ F ++ ++ K G K++ GG ++ I P
Sbjct: 324 ARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQP 383
Query: 339 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398
T+ DV I EEIFGP++ IL IE+ N+ T LAA +FT +
Sbjct: 384 TVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLS 443
Query: 399 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+ + AG + +N + PFGG + SG G G++ ++ K V
Sbjct: 444 QALQAGTVWVN--CYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTV 491
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 169 bits (430), Expect = 3e-47
Identities = 94/345 (27%), Positives = 158/345 (45%), Gaps = 24/345 (6%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV-------G 170
GV I PWN+PF L + A+ GN +V+KPSE P ++ AK+V G
Sbjct: 141 RALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRG 200
Query: 171 EYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGG 228
+V G L + K + TG+ +MA AAK++T V LELGG
Sbjct: 201 ------VFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGG 254
Query: 229 KSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF 287
K+P +V D +L++A + ++ + N+GQ C + + K + + L ++
Sbjct: 255 KAPAIVMDDA-DLELAVKAIVDSRVI-NSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAV 312
Query: 288 YGKNPLESKDLSR--IVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRIAPTLLLD 343
NP E D++ ++N+ R+ + + G ++ GG+ + PTLLLD
Sbjct: 313 QFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLD 372
Query: 344 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 403
V ++ IM EE FGP+LP++ D +ED+ + N L + ++T N + + ++ +
Sbjct: 373 VRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKF 432
Query: 404 GGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
G IN G ++SG+G GK + + V
Sbjct: 433 GETYINRENFEAMQ--GFHAGWRKSGIGGADGKHGLHEYLQTQVV 475
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 169 bits (430), Expect = 6e-47
Identities = 88/353 (24%), Positives = 155/353 (43%), Gaps = 32/353 (9%)
Query: 115 IVPEPFGVVLIISPWNYPFLLS---LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE 171
EP GV I+ PWNYP ++ +AAGN +V+KP++V P ++ A+L +
Sbjct: 174 TKKEPVGVCGIVIPWNYPLMMLSWKTAA---CLAAGNTVVIKPAQVTPLTALKFAELTLK 230
Query: 172 YMDLSS------IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAK-HLTPV 222
+ + ++ G+ + L KI +TG++ V + +M + A ++ V
Sbjct: 231 -----AGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKV 285
Query: 223 LLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLK 281
LELGGKSP ++F +L A + + + N G+ CI+ + + + ++ +
Sbjct: 286 SLELGGKSPLIIFADC-DLNKAVQMGMSSVFF-NKGENCIAAGRLFVEESIHNQFVQKVV 343
Query: 282 NELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAP 338
E+E NPLE + + H +L + G +V GG + P
Sbjct: 344 EEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQP 403
Query: 339 TLLLDVPRDSLIMSEEIFGPLLPILT--VDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396
T+ DV I EE FGP++ I ++ N+ LA+ +FT +
Sbjct: 404 TVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALY 463
Query: 397 FVETVSAGGLVINDTAVHLAVH-SLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+ + AG + IN + + PFGG ++SG G G+ + + + K V
Sbjct: 464 VSDKLQAGTVFINT---YNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 169 bits (431), Expect = 2e-45
Identities = 71/334 (21%), Positives = 131/334 (39%), Gaps = 18/334 (5%)
Query: 113 AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY 172
EP GV +I+PWN+P +S+ AI GN +V KPS + L +L E
Sbjct: 660 NHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREA 719
Query: 173 -MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAK------HLTPVL 223
+ G + L I +TG+ ++ AAK ++ ++
Sbjct: 720 GLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKII 779
Query: 224 LELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNE 283
E+GGK+ ++ D +L A ++ +G GQ C + +I K +E L +
Sbjct: 780 SEMGGKNAIIIDDDADLDEAVPHVLYSAFG-FQGQKCSACSRVIVLDAVYDKFIERLVSM 838
Query: 284 LENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR-IAPTLL 341
+ + + + + + + + K G +++ + + T++
Sbjct: 839 AKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTII 898
Query: 342 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS---GTKPLAAYLFTNNKKLKQQFV 398
+ + I EEIFGP+L ++ + + + NS L +F+ + + +
Sbjct: 899 GGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFA---LTGGIFSRSPEHLAKAR 955
Query: 399 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA 432
G L IN V PFGG + SG+G
Sbjct: 956 REFRVGNLYINRNNTGALVERQPFGGARMSGVGT 989
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 162 bits (412), Expect = 2e-44
Identities = 62/451 (13%), Positives = 154/451 (34%), Gaps = 46/451 (10%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSI---YEVALLKT--SIKSALKELKH 95
R ++L ++K+L + D + +S++ + L + ++L E+
Sbjct: 68 RAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHA 127
Query: 96 WMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPS 155
S S+ ++ GV L I+ +N+P + A+ +G +++KP+
Sbjct: 128 LRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPA 187
Query: 156 EVAPASSSLLAKLVGEYMDL--SSIRVVEGAVAET-SALLDQKWDKICYTGNSRVARIVM 212
+ + V + L ++ ++ G+ A + D + +TG++ A +
Sbjct: 188 TATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQIRSF--DVVSFTGSADTAATLR 245
Query: 213 AAAAK--HLTPVLLELGGKSP-VVFD----SGINLKVACRRMIMGKWGCNNGQACISPDH 265
A A + ++ + ++ + + ++ +GQ C +
Sbjct: 246 AHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTV-KSGQKCTAIRR 304
Query: 266 IITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KI 323
+ +LE+LK +L NP ++ + +V+ + + + +
Sbjct: 305 AFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLA 364
Query: 324 VHGGERDKNKLR------IAPTLLL--DVPRDSLIMSEEIFGPLLPILTVDKIEDSFD-- 373
+AP L + D +L+ E+FGP+ + D+
Sbjct: 365 YDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALP 424
Query: 374 ------IINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHS-------- 419
+ G L A +++N+ + ++ ++ + +
Sbjct: 425 EAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMP 484
Query: 420 -LPFGGVQESGMGA-YHGKFSFDVFSHKKAV 448
GG +G G G + + + A+
Sbjct: 485 MSLHGGPGRAGGGEELGGLRALAFYHRRSAI 515
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 155 bits (395), Expect = 4e-42
Identities = 86/354 (24%), Positives = 155/354 (43%), Gaps = 39/354 (11%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL--------- 168
P GVV+ I+ WN+P L+ + A+ GN +VLKP++ P +++ L ++
Sbjct: 147 VPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDG 206
Query: 169 VGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 226
V + V+ G + L I TG++ + + +A+++TPV+LEL
Sbjct: 207 V--------LNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLEL 258
Query: 227 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 285
GGK+P VV D +L A + G++ N GQ C + + + + ++
Sbjct: 259 GGKAPMVVMDDA-DLDKAAEDALWGRFA-NCGQVCTCVERLYVHASVYDEFMAKFLPLVK 316
Query: 286 NFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRI-----AP 338
+P+++ + N + ++ + G + GG+ + P
Sbjct: 317 GLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEP 376
Query: 339 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398
T+L+DV +D++++ EE FGP+LPI+ V +E + + N L+AY+ T +
Sbjct: 377 TVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQS--FANIN- 433
Query: 399 ETVSAG---GLV-INDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448
+ G V IN G ++SG G GKF + + KK V
Sbjct: 434 -QAISDLEVGEVYINRGMGEQHQ--GFHNGWKQSGFGGEDGKFGLEQYLEKKTV 484
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 154 bits (390), Expect = 2e-41
Identities = 60/331 (18%), Positives = 120/331 (36%), Gaps = 37/331 (11%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVG-----AIAAGNALVLKPSEVAPASSSLLAKLVGEY 172
G V + N+P S G A+AAG +++K P +S ++A+ + +
Sbjct: 135 IALGPVAVFGASNFPLAFS---AAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQA 191
Query: 173 MDLSSI-----RVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPV--L 223
+ + +++G L + + +TG+ R + A + P+
Sbjct: 192 LKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFY 251
Query: 224 LELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLK 281
ELG +P +F S + K + GQ C P + +E+ +
Sbjct: 252 GELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQ 311
Query: 282 NELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLL 341
+ + ++P S L+ + ++ +++ DD + + +A L
Sbjct: 312 SLIR---QQSP--STLLTPGIRDSYQSQVVSRGSDDGI--DVTFSQAESP---CVASALF 361
Query: 342 L---DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK--QQ 396
+ + R EEIFGP I+ + + D + L A + + Q
Sbjct: 362 VTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQ 421
Query: 397 FVETVS--AGGLVINDTAVHLAV-HSLPFGG 424
+ + AG LV N + V +++ GG
Sbjct: 422 LIPRLEEIAGRLVFNGWPTGVEVGYAMVHGG 452
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 149 bits (379), Expect = 6e-40
Identities = 93/333 (27%), Positives = 153/333 (45%), Gaps = 35/333 (10%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL--------- 168
+P GV I+PWN+P + A+AAG +VLKP+ P S+ LA+L
Sbjct: 144 QPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAG 203
Query: 169 VGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 226
V VV G+ L + K+ +TG++ + R +M AK + V LEL
Sbjct: 204 V--------FNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLEL 255
Query: 227 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 285
GG +P +VFD +L A + K+ N GQ C+ + + + E L+ +
Sbjct: 256 GGNAPFIVFDDA-DLDKAVEGALASKFR-NAGQTCVCANRLYVQDGVYDRFAEKLQQAMS 313
Query: 286 NFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRIAPTLLL 342
+ + L++ + +++ A++ + + D G ++V GG+ ++ PT+L+
Sbjct: 314 KLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILV 373
Query: 343 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 402
DVP ++ + EE FGPL P+ D N LAAY + + L + F V
Sbjct: 374 DVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARD--LSRVF--RVG 429
Query: 403 AG---GLV-INDTAVHLAVHSLPFGGVQESGMG 431
G+V IN + V PFGG++ SG+G
Sbjct: 430 EALEYGIVGINTGIISNEV--APFGGIKASGLG 460
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 7e-40
Identities = 95/333 (28%), Positives = 150/333 (45%), Gaps = 35/333 (10%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL--------- 168
EP GV I+PWN+P + V A+AAG +V+KP+E P S+ +A L
Sbjct: 147 EPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKG 206
Query: 169 VGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 226
V + VV G + + K+ +TG++ V R++MA +A + + LEL
Sbjct: 207 V--------LSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLEL 258
Query: 227 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 285
GG +P +VFD +L A I K+ NNGQ C+ + + + L +
Sbjct: 259 GGNAPFIVFDDA-DLDAAVEGAIASKYR-NNGQTCVCTNRFFVHERVYDAFADKLAAAVS 316
Query: 286 NFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRIAPTLLL 342
ES L ++N ++ + D G ++ GG+R PT+L
Sbjct: 317 KLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLT 376
Query: 343 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 402
V D + EE FGPL P+ E+ + N LAAYL++ + + + + V+
Sbjct: 377 GVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRD--IGRVW--RVA 432
Query: 403 AG---GLV-INDTAVHLAVHSLPFGGVQESGMG 431
G+V IN + V PFGGV++SG+G
Sbjct: 433 EALEYGMVGINTGLISNEV--APFGGVKQSGLG 463
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 1e-39
Identities = 90/363 (24%), Positives = 156/363 (42%), Gaps = 37/363 (10%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL--------- 168
P GV +I PWN+P + + A+AAG V+KP+ P + +
Sbjct: 146 RPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDG 205
Query: 169 VGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 226
+ + +V G + +L + + +TG++ V R ++ A+ + + LEL
Sbjct: 206 M--------VNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALEL 257
Query: 227 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 285
GG +P +VFD +L+ A +I K+ GQ C+ + I + A + L +
Sbjct: 258 GGNAPFIVFDDA-DLEAAADNLIANKFR-GGGQTCVCANRIFVHEKVADAFGQKLAERVN 315
Query: 286 NFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK--NKLRIAPTLL 341
+ + D+ ++N F ++ + L D G +V G + + + L PT++
Sbjct: 316 KMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVV 375
Query: 342 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV 401
V R+ EE FGPL+P+ E+ D N LA+Y+FT + ++ V
Sbjct: 376 QGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTAD--AERAQ--RV 431
Query: 402 SAG---GLV-INDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDV 457
+AG G V N PFGG++ SG+G G F + V RGF ++
Sbjct: 432 AAGLRFGHVGWNTGTGPTPE--APFGGMKASGIGREGGLEGLFEFVEAQTV-PRGFAENL 488
Query: 458 PVR 460
+
Sbjct: 489 YFQ 491
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 148 bits (377), Expect = 2e-39
Identities = 93/332 (28%), Positives = 152/332 (45%), Gaps = 35/332 (10%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL--------- 168
+P GV I+PWN+P + A+AAG ++++P+++ P ++ L L
Sbjct: 167 QPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAG 226
Query: 169 VGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 226
V +++V G E A L + K+ +TG++ V R++MA A + + LEL
Sbjct: 227 V--------LQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLEL 278
Query: 227 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 285
GG +P +VFD +L A ++ K+ N GQ C+ + I + K E L +++
Sbjct: 279 GGNAPFIVFDDA-DLDAAVDGAMVSKYR-NAGQTCVCANRIYVQRGVYDKFAEKLAAKVK 336
Query: 286 NFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLD 343
N E + ++ ++ ++D G K++ GG+ L P +L
Sbjct: 337 ELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE-LGGLFFEPGILTG 395
Query: 344 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 403
V D L+ EE FGPL P+ D E+ N LAAY +T N + VS
Sbjct: 396 VTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTEN--FSRAI--RVSE 451
Query: 404 G---GLV-INDTAVHLAVHSLPFGGVQESGMG 431
G+V N + V PFGGV++SG+G
Sbjct: 452 ALEYGMVGHNTGLISNEV--APFGGVKQSGLG 481
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 2e-39
Identities = 69/325 (21%), Positives = 134/325 (41%), Gaps = 16/325 (4%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY---MD 174
GV + ISPWN+P + L V A+ AGN++V KP+E P + L+ E
Sbjct: 648 RGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKS 707
Query: 175 LSSIRVVEGAVAETSALL-DQKWDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKS 230
+ +G + AL + +TG++ VAR + A A + P++ E GG +
Sbjct: 708 ALYLVTGDGRIGA--ALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGIN 765
Query: 231 PVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK 290
++ D+ + ++ + + GQ C + + +D A +++E +
Sbjct: 766 AMIADATALPEQVADDVVTSAFR-SAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIG 824
Query: 291 NPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSL 349
+P + + + +++ RL + K ++ G + +AP +
Sbjct: 825 DPSDVATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGPAPEGCF-VAPHIFELTEAG-- 881
Query: 350 IMSEEIFGPLLPILTV--DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 407
++EE+FGP+L ++ + +E I L + + + ++ V G +
Sbjct: 882 QLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIY 941
Query: 408 INDTAVHLAVHSLPFGGVQESGMGA 432
+N + V PFGG SG G
Sbjct: 942 VNRNMIGAVVGVQPFGGNGLSGTGP 966
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 1e-38
Identities = 54/337 (16%), Positives = 116/337 (34%), Gaps = 36/337 (10%)
Query: 116 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 175
V P GVV + P P + + +I AGN++V P A + +++ E +
Sbjct: 105 VAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEK 164
Query: 176 SS-----IRVVEGAVAE-TSALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGG 228
+ I + + T L+ I TG S + + AA TP + G
Sbjct: 165 AGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVK----AAYSSGTPAIGVGPG 220
Query: 229 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFY 288
P + N+ A + ++ K +NG C S ++ + ++ + + +
Sbjct: 221 NGPAFIERSANIPRAVKHILDSK-TFDNGTICASEQSVVVERVNKEAVIAEFRK--QGAH 277
Query: 289 GKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRD 347
+ E+ L + + + + ++ + ++ IA
Sbjct: 278 FLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEE---TKVGA 334
Query: 348 SLIMSEEIFGPLLPILTVDKIEDSF----DIINSGTKPLAAYLFTNNKKLKQQFVETVSA 403
+ S E P+L T + +++ DI+ + + +K++ ++F
Sbjct: 335 KIPYSREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPV 394
Query: 404 GGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSF 439
L++N GG+ GA + +
Sbjct: 395 SRLLVNTPG--------ALGGI-----GATTNLVPAL 418
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 4e-38
Identities = 97/339 (28%), Positives = 157/339 (46%), Gaps = 43/339 (12%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL--------- 168
+P GV +I+PWN+P + V A+AAG +V+KP+E P S+ LA+L
Sbjct: 145 QPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSG 204
Query: 169 VGEYMDLSSIRVVEGAVAETSA-----LLDQKWDKICYTGNSRVARIVMAAAAKHLTPVL 223
V V+ + D KI +TG++ +I++ AA + V
Sbjct: 205 V--------YNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVS 256
Query: 224 LELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK----DYAPKLLE 278
+ELGG +P +VFDS N+ A + K+ N GQ C+ + + + + E
Sbjct: 257 MELGGLAPFIVFDSA-NVDQAVAGAMASKFR-NTGQTCVCSNQFLVQRGIHDAFVKAFAE 314
Query: 279 SLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRI 336
++K L G E ++N ++ K ++D G +V GG+R K
Sbjct: 315 AMKKNLRVGNGFE--EGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFF 372
Query: 337 APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396
PTLL +V +D L EE FGPL P++ D E++ I N+ LA Y ++ + Q
Sbjct: 373 EPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQD--PAQI 430
Query: 397 FVETVSAG---GLV-INDTAVHLAVHSLPFGGVQESGMG 431
+ V+ G+V +N+ + PFGGV++SG+G
Sbjct: 431 W--RVAEQLEVGMVGVNEGLISSVE--CPFGGVKQSGLG 465
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 3e-37
Identities = 58/314 (18%), Positives = 112/314 (35%), Gaps = 35/314 (11%)
Query: 116 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 175
+ EP G++ I P P ++ + ++ N ++ P A S++ AKLV +
Sbjct: 100 IAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVA 159
Query: 176 SS-----IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGG 228
+ I ++ E S L I TG + + AA P + G
Sbjct: 160 AGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYSSGKPAIGVGAG 215
Query: 229 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFY 288
PVV D ++K A ++M K +NG C S +I + ++ E + +
Sbjct: 216 NVPVVIDETADIKRAVASVLMSKTF-DNGVVCASEQAVIVVDEVYDEVKERFASHKAHV- 273
Query: 289 GKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVH------GGERDKNKLRIAPTLLL 342
+ ++ + +++ + K+ G+ G + + + L
Sbjct: 274 -LSKTDADKVRKVLLIDGALN-------AKIVGQPATAIAEMAGVKVPADTKVLIGEGLG 325
Query: 343 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFD----IINSGTKPLAAYLFTNNKKLKQ--- 395
V D + E P L + D ED+ ++ G + L+TN
Sbjct: 326 KVSYDDAF-AHEKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIR 384
Query: 396 QFVETVSAGGLVIN 409
F + + ++IN
Sbjct: 385 YFGDKMKTARILIN 398
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 5e-35
Identities = 59/344 (17%), Positives = 112/344 (32%), Gaps = 40/344 (11%)
Query: 115 IVPEPFGVVLIISPWNYPFLLSLDP--VVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY 172
+V P G V + N+P S A+AAG +V+K P + ++A+ V
Sbjct: 165 LVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAA 224
Query: 173 MDLSSI-----RVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPV--L 223
+ + + +++G + L + +TG+ R + A P+
Sbjct: 225 IRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFF 284
Query: 224 LELGGKSPVVFDSGINLKVAC---RRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLES 279
ELG +P+ A + GQ C +P + + A + +
Sbjct: 285 GELGSVNPMFLLPEALKARAETLGQGWAGSLTM-GAGQFCTNPGIAVVIEGADADRFTTA 343
Query: 280 LKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPT 339
L + L + + ++ + V K + E P
Sbjct: 344 AVEALAKVAPQTMLTDG-----IAKAYRDGQARFATRNAV--KPLLATESSGRDAS--PN 394
Query: 340 LLLDVPRDSL---IMSEEIFGPLLPILTVDKIEDSFDIINS---GTKPLAAYLFTNNKKL 393
L L + EE+FGPL ++ V + ++ L A + + L
Sbjct: 395 LFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQ---LTATIHMDAGDL 451
Query: 394 KQ----QFVETVSAGGLVIND--TAVHLAVHSLPFGGVQESGMG 431
+ + V AG +++N T V + + G S
Sbjct: 452 ETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNF 495
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 2e-33
Identities = 88/347 (25%), Positives = 157/347 (45%), Gaps = 20/347 (5%)
Query: 118 EPFGVVLIISPWNYPFLLSL--DPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 175
P GVV I+P+N+P ++ P+ AIA GN +LKPSE P + L +L + L
Sbjct: 140 YPIGVVGGIAPFNFPMMVPCWMFPM--AIALGNTFILKPSERTPLLTEKLVELFEK-AGL 196
Query: 176 SS--IRVVEGAVAETSALLDQKWDK-ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 232
VV GA + +L+ K I + G+ V V +++L V G K+
Sbjct: 197 PKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHT 256
Query: 233 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF-YGKN 291
+ + NL+ ++ +G G+ C++ + + A + + L+ ++ + G
Sbjct: 257 IVLNDANLEDTVTNIVGAAFGSA-GERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNG 315
Query: 292 PLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK---NKLRIAPTLLLDVPRD 347
+ L ++ ++ R ++ G ++V G R+ + + PT+ +V +
Sbjct: 316 LDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDG-RENVSDDGYFVGPTIFDNVTTE 374
Query: 348 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 407
I +EIF P+L ++ V ++++ +I N A LFT+N + F E + AG L
Sbjct: 375 MTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLG 434
Query: 408 IN-DTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSR 451
IN +A F G + S G +GK S D ++ KK V +R
Sbjct: 435 INLGVPAPMAFFP--FSGWKSSFFGTLHANGKDSVDFYTRKKVVTAR 479
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 7e-30
Identities = 73/330 (22%), Positives = 136/330 (41%), Gaps = 21/330 (6%)
Query: 121 GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIR 179
G V ISP+N+ + + GN ++ KPS+ A +S + +++ E + + I+
Sbjct: 202 GFVAAISPFNFT-AIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQ 260
Query: 180 VVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSP 231
V + + I +TG+ + + A + + E GGK+
Sbjct: 261 FVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNF 320
Query: 232 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN 291
S ++ + + GQ C + + K P++ L E +
Sbjct: 321 HFVHSSADVDSVVSGTLRSAFE-YGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGD 379
Query: 292 PLE--SKDLSRIVNSNHFARLSKLLDDDKVSGKIVH--GGERDKNK-LRIAPTLLLDVPR 346
P E S ++++ FAR+ K L+ + S + GG+ +++ + P ++
Sbjct: 380 PAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDP 439
Query: 347 DSLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV-- 401
IM EEIFGP+L + DK ++ +++S T L +F +K + Q+ +
Sbjct: 440 QEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRN 499
Query: 402 SAGGLVINDTAVHLAVHSLPFGGVQESGMG 431
+AG IND + V PFGG + SG
Sbjct: 500 AAGNFYINDKSTGSVVGQQPFGGARASGTN 529
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 1e-29
Identities = 93/351 (26%), Positives = 155/351 (44%), Gaps = 24/351 (6%)
Query: 118 EPFGVVLIISPWNYPFLLSL--DPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 175
+P G+ I+P+N+P ++ + AIA GNA +LKPSE P+ LA+L+ E L
Sbjct: 161 QPVGIGAGITPFNFPGMIPMWMFAP--AIACGNAFILKPSERDPSVPIRLAELMIE-AGL 217
Query: 176 SS--IRVVEGAVAETSALLDQKWDK-ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 232
+ + VV G A+L + + G++ +AR V AA + G K+ +
Sbjct: 218 PAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHM 277
Query: 233 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITT-KDYAPKLLESLKNELENF-YGK 290
+ +L A +I +G G+ C++ + ++ A +L++ L +E+ G
Sbjct: 278 IIMPDADLDQAANALIGAGYGSA-GERCMAISVAVPVGEETANRLIDKLVPMVESLRIGP 336
Query: 291 NPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD------KNKLRIAPTLLLD 343
E D+ +V R+ L+D G K+V G RD +N I L D
Sbjct: 337 YTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDG-RDFKLQGYENGHFIGGCLFDD 395
Query: 344 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 403
V D I EIFGP+L ++ E++ + ++T + + F ++
Sbjct: 396 VTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINI 455
Query: 404 GGLVIN-DTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSR 451
G + +N V LA HS FGG + S G HG S ++ K + SR
Sbjct: 456 GMVGVNVPIPVPLAYHS--FGGWKSSSFGDLNQHGTDSIKFWTRTKTITSR 504
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 60.6 bits (146), Expect = 8e-10
Identities = 59/378 (15%), Positives = 106/378 (28%), Gaps = 132/378 (34%)
Query: 16 AEAASLFVKE-LRGTFASGKTKSYGWRVSQLKSLMK---MLNEREPDIVDALRQD---LD 68
E FV+E LR +Y + +S +K+ + M+ + D L D
Sbjct: 76 EEMVQKFVEEVLR--------INYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA 127
Query: 69 KPELESSIYEVALLK--TSIKSALKEL---------------KHWMTPEKAKTSITTFPS 111
K Y V+ L+ ++ AL EL K W+ +
Sbjct: 128 K-------YNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCL-------- 172
Query: 112 SAEIVPE-PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 170
S ++ + F + W L+L N P V LL ++
Sbjct: 173 SYKVQCKMDFKIF-----W-----LNL---------KN--CNSPETVLEMLQKLLYQIDP 211
Query: 171 EYMDLSS-----IRVVEGAVAETSALLDQK------------WD-KI-------C----Y 201
+ S + AE LL K + K C
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLT 271
Query: 202 TGNSRVARIVMAAAAKHLTPVLLELG---GKSPVVFDSGINLKVAC-RRMIMGKWGCNNG 257
T +V + AA H++ + + + ++ + R
Sbjct: 272 TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR----------- 320
Query: 258 QAC-ISP-----------DHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSN 305
+ +P D + T ++ + L +E+ N LE + +
Sbjct: 321 EVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSL--NVLEPAEYRK----- 373
Query: 306 HFARLSKLLDDDKVSGKI 323
F RLS + +
Sbjct: 374 MFDRLSVFPPSAHIPTIL 391
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 60.6 bits (146), Expect = 8e-10
Identities = 74/456 (16%), Positives = 130/456 (28%), Gaps = 139/456 (30%)
Query: 23 VKELR--------GTFASGKT-------KSYG----------W----RVSQLKSLMKMLN 53
+ ELR G SGKT SY W + +++++ML
Sbjct: 144 LLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQ 203
Query: 54 ----------EREPDIVDALRQDLD--KPEL----ESSIYEVALLKTSIKSALKELKHWM 97
D ++ + + EL +S YE LL + ++ K W
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL---VLLNVQNAKAW- 259
Query: 98 TPEKA-----KTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVL 152
A K +TT V +S +SLD L
Sbjct: 260 ---NAFNLSCKILLTTRFKQ---------VTDFLSA-ATTTHISLDHHSMT--------L 298
Query: 153 KPSEVAPASSSLLAKLVG-EYMDLSSIRVVEG---AVAETSALLDQ---KWDKICYTGNS 205
P E SLL K + DL V+ ++ + + WD +
Sbjct: 299 TPDE----VKSLLLKYLDCRPQDLPR-EVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD 353
Query: 206 RVARIVMAAAAKHLTPVLLELGGKSPVVF--DSGINLKVACR----------RMIMGKWG 253
++ I + ++ L P VF + I + +++ K
Sbjct: 354 KLTTI-IESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNK-- 410
Query: 254 CNNGQACI---SPDHIITTKDYAPKLLESLKNE-------LENFYGKNPLESKDLSRIVN 303
+ + + + I+ +L L+NE ++++ +S DL
Sbjct: 411 LHK-YSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYL 469
Query: 304 SN--------H---------FARLSKL-LDDDKVSGKIVHGGERDKNKLRIAPTLL-LDV 344
H + LD + KI H I TL L
Sbjct: 470 DQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKF 529
Query: 345 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTK 380
+ + ++ + L V+ I D F +
Sbjct: 530 YKPYICDNDPKYERL-----VNAILD-F-LPKIEEN 558
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.4 bits (122), Expect = 5e-07
Identities = 65/391 (16%), Positives = 129/391 (32%), Gaps = 135/391 (34%)
Query: 58 DIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVP 117
D+ D + L K E++ + + K ++ L+ W K + + F
Sbjct: 37 DVQDMPKSILSKEEID----HIIMSKDAVSGTLRLF--WTLLSKQEEMVQKF-------- 82
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
V ++ NY FL+S + E S
Sbjct: 83 ----VEEVLRI-NYKFLMS------------------------------PIKTEQRQPS- 106
Query: 178 IRVVEGAVAETSALLDQKWDKICYTGNSR-----VARIVMA----AAAKHLTP---VLLE 225
T ++Q+ D++ Y N V+R+ A L P VL++
Sbjct: 107 --------MMTRMYIEQR-DRL-YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLID 156
Query: 226 --LG-GKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKN 282
LG GK+ V D ++ KV C+ W N C SP+ ++ ++L+ L
Sbjct: 157 GVLGSGKTWVALDVCLSYKVQCKMDFKIFW-LNLKN-CNSPETVL-------EMLQKLLY 207
Query: 283 ELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLL 342
+++ + S ++ ++S A L +LL + +N L + LL
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHSIQ-AELRRLLKS-----------KPYENCLLV----LL 251
Query: 343 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDI-----INSGTKPLAAYLFTNNKKLKQQF 397
+V +++ K ++F++ + + K + +L +
Sbjct: 252 NV-QNA------------------KAWNAFNLSCKILLTTRFKQVTDFL--SAATTTHIS 290
Query: 398 VETVSAG-------GLVINDTAVHLAVHSLP 421
++ S L++ + LP
Sbjct: 291 LDHHSMTLTPDEVKSLLLK--YLDCRPQDLP 319
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 493 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 97.43 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 96.48 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-100 Score=796.35 Aligned_cols=442 Identities=24% Similarity=0.342 Sum_probs=412.8
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
++|++++++.++.+|+++|+++|++||..|+++|.++|.++|++++++|+++.++|+++++.|+|||+.+++..|+..++
T Consensus 31 tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~ 110 (490)
T 2wme_A 31 NGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGA 110 (490)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999755799999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+.+.... .+ ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 111 ~~~~~~a~~~~~~~~~~-~~---~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~ 186 (490)
T 2wme_A 111 DVLEYYAGLVPAIEGEQ-IP---LRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTAL 186 (490)
T ss_dssp HHHHHHHHHGGGCCEEE-EE---EETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHhccccccCcc-cc---ccCCcceeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHH
Confidence 99999998877654322 11 123445788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHH-HHhccccchhhhcCCCCeEEEcCCCC
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGIN 239 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~-~a~~~~~~~~~elgG~~p~iV~~daD 239 (493)
.+++++.++ +|+|++|+|+| +.+.++.|++|+ ||+|+||||+.+|+.+++ .+++++||+++|||||||+||++|||
T Consensus 187 ~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAd 266 (490)
T 2wme_A 187 KLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDAD 266 (490)
T ss_dssp HHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSC
T ss_pred HHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEccCcc
Confidence 999999999 99999999999 567899999996 999999999999998876 55667899999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHH
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (493)
+|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|||. +++++||++++.+++++.++|+++.
T Consensus 267 l~~A~~~~~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~ 345 (490)
T 2wme_A 267 LDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGK 345 (490)
T ss_dssp HHHHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-ccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999985 7899999999999999999999986
Q ss_pred h-CCeEEeCCccC-----CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 011107 319 V-SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (493)
Q Consensus 319 ~-~~~~~~gg~~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~ 392 (493)
. ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 346 ~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~ 425 (490)
T 2wme_A 346 AQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 425 (490)
T ss_dssp HTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred hcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHH
Confidence 5 67999999763 25899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 393 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 393 ~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 426 ~a~~~~~~l~aG~v~iN~~~~--~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~ 483 (490)
T 2wme_A 426 RAHRAIHRLEAGICWINTWGE--SPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp HHHHHHHHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHCCeeEEEEeCCCC--CCCCCCcccccccccCchhHHHHHHHhhceeEEEEEC
Confidence 999999999999999998654 4678999999999999999999999999999999875
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-100 Score=792.52 Aligned_cols=456 Identities=43% Similarity=0.756 Sum_probs=416.7
Q ss_pred ccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHH
Q 011107 10 KNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSA 89 (493)
Q Consensus 10 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~ 89 (493)
..+.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++..|+..+++.++++
T Consensus 11 ~~~~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~ 90 (469)
T 3sza_A 11 VPRGSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYM 90 (469)
T ss_dssp -------CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 34567888999999999999999999999999999999999999999999999999999999998766999999999999
Q ss_pred HHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHH
Q 011107 90 LKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV 169 (493)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l 169 (493)
++.++.|..+..........+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~ 170 (469)
T 3sza_A 91 IQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATII 170 (469)
T ss_dssp HHHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH
Confidence 99998887654433222223456788999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcEEEEeCChHhHHHHHhCCCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHHHH
Q 011107 170 GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIM 249 (493)
Q Consensus 170 ~~alP~g~v~vv~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~ 249 (493)
.+++|+|++|+++|+.+.+..|+.|++|+|+||||+++|+.|++.+++++||+++|+|||||+||++|||+|.|++.+++
T Consensus 171 ~~alP~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~ 250 (469)
T 3sza_A 171 PQYLDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAW 250 (469)
T ss_dssp HHHSCTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHH
T ss_pred HHhCCcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHH
Confidence 99999999999999877788898889999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCeEEeCCcc
Q 011107 250 GKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER 329 (493)
Q Consensus 250 ~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~ 329 (493)
++| .|+||.|++++|||||+++||+|+++|+++++++.++++++++++||++++++++++.+++ +++++++||..
T Consensus 251 ~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~i----~ga~v~~GG~~ 325 (469)
T 3sza_A 251 GKF-MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLI----EGQKVAYGGTG 325 (469)
T ss_dssp HHH-GGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHHHCSCGGGCTTCCCCSCHHHHHHHHHHH----TTSEEEECCCE
T ss_pred HHH-hcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHhcCCCCcccCcccccCCHHHHHHHHHHH----cCCEEEeCCcc
Confidence 999 9999999999999999999999999999999998644446789999999999999999999 47899999987
Q ss_pred CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcccceEEEc
Q 011107 330 DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409 (493)
Q Consensus 330 ~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN 409 (493)
+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||
T Consensus 326 ~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN 405 (469)
T 3sza_A 326 DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAAN 405 (469)
T ss_dssp ETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEES
T ss_pred CCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEe
Confidence 66799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEecCCCC--CCccCCCCchhHHH
Q 011107 410 DTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGD--VPVRYPPYTKGKLR 470 (493)
Q Consensus 410 ~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~~~~~--~~~~~~p~~~~~~~ 470 (493)
++..+...+.+||||+|.||+|+++|.+|+++||+.|+|+++..+.+ .+++||||+..+.+
T Consensus 406 ~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~~~~~~~~~~~yppy~~~~~~ 468 (469)
T 3sza_A 406 DVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPPSPAKMTQ 468 (469)
T ss_dssp CSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECCSSCCGGGGGGSSSCCC----
T ss_pred CCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECCcccccccccccCCCCccccc
Confidence 98766567899999999999999999999999999999999876544 57899999987654
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-97 Score=774.70 Aligned_cols=440 Identities=20% Similarity=0.315 Sum_probs=416.2
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||+.|+.++.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 13 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 91 (484)
T 3ros_A 13 TNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK-EEVELCV 91 (484)
T ss_dssp TTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++..++++........ .+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 92 ~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~ 167 (484)
T 3ros_A 92 SICNYYADHGPEMLKPTKLNS----DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAA 167 (484)
T ss_dssp HHHHHHHHHHHHHTSCEEECC----TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHH
T ss_pred HHHHHHHHHHHHhcCCeeccC----CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 999999999998876543221 3456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChH-hHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~-~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+++++.++ +|+|++|+|+|+.+ .++ |+.|+ ||+|+||||+++|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 168 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl 246 (484)
T 3ros_A 168 LTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDDADP 246 (484)
T ss_dssp HHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECTTCCH
T ss_pred HHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCCCCCH
Confidence 999999999 99999999999654 566 99995 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+|. +++++||++++.+++++.++|+++.+
T Consensus 247 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~ 325 (484)
T 3ros_A 247 QVLRNVLNDART-YNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAID 325 (484)
T ss_dssp HHHHHHHTTTTT-GGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-cCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999985 78999999999999999999999865
Q ss_pred -CCeEEeCCcc-CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 320 -SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 320 -~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
++++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++
T Consensus 326 ~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 405 (484)
T 3ros_A 326 AGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKV 405 (484)
T ss_dssp TTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHH
T ss_pred cCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHH
Confidence 6799999975 35789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|+++.
T Consensus 406 ~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 458 (484)
T 3ros_A 406 SAQIETGMTVINGRWI--TSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVT 458 (484)
T ss_dssp HHHSCSSCCEETSCCC--CCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECG
T ss_pred HHhCccceEEECCCCC--CCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECC
Confidence 9999999999999643 5688999999999999999999999999999999875
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-97 Score=777.82 Aligned_cols=445 Identities=27% Similarity=0.426 Sum_probs=416.4
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh-----hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA-----SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYE 78 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~e 78 (493)
+++++++++.++.+|+++++++|++||. .|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|
T Consensus 32 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~e 110 (503)
T 3iwj_A 32 TQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAA-WD 110 (503)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HH
Confidence 5789999999999999999999999999 99999999999999999999999999999999999999999996 59
Q ss_pred HHHHHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCc
Q 011107 79 VALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVA 158 (493)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~ 158 (493)
+..+++.+++++...+++.............+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+
T Consensus 111 v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~t 190 (503)
T 3iwj_A 111 IDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELA 190 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcc
Confidence 99999999999999887754332111111123457889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEc
Q 011107 159 PASSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235 (493)
Q Consensus 159 ~~~~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~ 235 (493)
|+++..+++++.++ +|+|+||+|+| +.+.++.|+.|+ +|+|+||||+++|+.|++.+++++||+++|+|||||+||+
T Consensus 191 p~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~~v~lElGGk~p~iV~ 270 (503)
T 3iwj_A 191 SLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVF 270 (503)
T ss_dssp CHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHHHHHGGGTCCEEEECCCCEEEEEC
T ss_pred hHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHHHHHhcCCCCEEEECCCCCceEEc
Confidence 99999999999999 99999999999 457889999995 9999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHH
Q 011107 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLL 314 (493)
Q Consensus 236 ~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i 314 (493)
+|||+|.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+|. +++++||++++.+++++.+++
T Consensus 271 ~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i 349 (503)
T 3iwj_A 271 EDVDLDKAAEWAIFGCF-WTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFV 349 (503)
T ss_dssp SSSCHHHHHHHHHHHHT-GGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH-hcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999999999999999999999985 689999999999999999999
Q ss_pred HHHHh-CCeEEeCCccC---CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCC
Q 011107 315 DDDKV-SGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390 (493)
Q Consensus 315 ~~a~~-~~~~~~gg~~~---~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 390 (493)
+++.+ ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 350 ~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 429 (503)
T 3iwj_A 350 SNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISND 429 (503)
T ss_dssp HHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSC
T ss_pred HHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCC
Confidence 99865 67999999764 468999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 391 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 391 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 430 ~~~a~~~~~~l~aG~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~~~ 489 (503)
T 3iwj_A 430 LERCERVTKAFKAGIVWVNCSQP--CFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQYI 489 (503)
T ss_dssp HHHHHHHHHHCCSSEEEESSSCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHHhCCcceEEEcCCCC--CCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEEeC
Confidence 99999999999999999998643 5688999999999999999999999999999999875
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-96 Score=766.75 Aligned_cols=442 Identities=33% Similarity=0.591 Sum_probs=407.9
Q ss_pred chhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 3 ~~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
.+++++++++.++.+|+++++++|++||..|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++..|+..+
T Consensus 14 ~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~ 93 (457)
T 3lns_A 14 HIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAV 93 (457)
T ss_dssp ---------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHTHHHH
T ss_pred CCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999975699999
Q ss_pred HHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHH
Q 011107 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~ 162 (493)
++.++++++.++++..++.........+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 94 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~ 173 (457)
T 3lns_A 94 LHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETS 173 (457)
T ss_dssp HHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHH
T ss_pred HHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHH
Confidence 99999999999988765443322222345678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCcEEEEeCChHhHHHHHhCCCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHH
Q 011107 163 SLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV 242 (493)
Q Consensus 163 ~~l~~~l~~alP~g~v~vv~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~ 242 (493)
.++++++.+++|+|+||+|+|+.+.+.+|+++++|+|+||||+++|+.|++.+++++||+++|+|||||+||++|||+|.
T Consensus 174 ~~l~~l~~~alP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~ 253 (457)
T 3lns_A 174 AVIEKIIAEAFAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQ 253 (457)
T ss_dssp HHHHHHHHHHCCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEEECTTCCHHH
T ss_pred HHHHHHHHHhCCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCeECCCCCHHH
Confidence 99999999999999999999988889999987799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCe
Q 011107 243 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322 (493)
Q Consensus 243 Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~ 322 (493)
|++.+++++| +|+||.|++++|||||++++|+|+++|++++++++ |.+. ++||++++++++++.++++++ +++
T Consensus 254 Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~-~~gpli~~~~~~rv~~~i~~a--~~~ 326 (457)
T 3lns_A 254 TVNQLMFGKF-INSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN-STGKLVTERQVQRLVSLLEAT--QGQ 326 (457)
T ss_dssp HHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT-TTCCCSSHHHHHHHHHHHHHC--CSE
T ss_pred HHHHHHHHHH-HhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc-cccCCCCHHHHHHHHHHHHhc--CCe
Confidence 9999999999 99999999999999999999999999999999988 4444 999999999999999999975 369
Q ss_pred EEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhc-CCCCcEEEEecCCHHHHHHHHhhc
Q 011107 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS-GTKPLAAYLFTNNKKLKQQFVETV 401 (493)
Q Consensus 323 ~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~-~~~gl~a~v~t~d~~~~~~~~~~l 401 (493)
+++||..+..|+|++|||+++++++|++++||+||||++|++|+|+||||+++|+ ++|||+++|||+|.++++++++++
T Consensus 327 ~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l 406 (457)
T 3lns_A 327 VLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQI 406 (457)
T ss_dssp EEECCCEEGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTS
T ss_pred EEeCCccCCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhC
Confidence 9999986657899999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred ccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 402 SAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 402 ~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++|+|+||+++.+...+.+||||+|.||+|+++|.+|+++||+.|+|++.
T Consensus 407 ~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 407 QSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp CCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred CcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 99999999987655678999999999999999999999999999999764
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-97 Score=775.64 Aligned_cols=443 Identities=19% Similarity=0.316 Sum_probs=415.2
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|+++.++|+++++.|+|||..++...|+..++
T Consensus 49 tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~ 128 (498)
T 4f3x_A 49 TGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAII 128 (498)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999446999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++..++++.... .+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 129 ~~l~~~a~~~~~~~~~~-~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~ 205 (498)
T 4f3x_A 129 DCWRFFAGAVRNLHAPA-AGE--YLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTAL 205 (498)
T ss_dssp HHHHHHHHHTTCCEEEC-BEE--EETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHhcCcc-ccC--CcccccceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHH
Confidence 99999999887754321 111 112446788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~alP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+++++.+++|+|++|+|+| +.+.+++|++|+ ||+|+||||+++|+.|++.+++++||+++|+|||||+||++|||+|
T Consensus 206 ~l~~l~~ealP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dADl~ 285 (498)
T 4f3x_A 206 KLARLIADILPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLE 285 (498)
T ss_dssp HHHHHHHTTSCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHHHhCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCceeecCCCCCcEEECCCCCHH
Confidence 99999999999999999999 567899999995 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+| ++++++||++++.+++++.++|+++.+
T Consensus 286 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~ 364 (498)
T 4f3x_A 286 AVVNGIRTFGY-YNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQ 364 (498)
T ss_dssp HHHHHHHHHTT-GGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHH-hcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999 999999999999999999999999999999999999998 478999999999999999999999865
Q ss_pred CC-eEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 320 SG-KIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 320 ~~-~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
++ ++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++
T Consensus 365 Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 444 (498)
T 4f3x_A 365 KHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRA 444 (498)
T ss_dssp TTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHH
T ss_pred CCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHH
Confidence 67 999999763 4789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++|+|+||++..+ .+.+||||+|.||+|+++|.+++++||+.|+|+++.
T Consensus 445 a~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~~ 497 (498)
T 4f3x_A 445 ASRLQYGCTWINTHFML--TNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMINH 497 (498)
T ss_dssp HHHCCSSEEEESCCSCC--CTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEEC
T ss_pred HHhCCcceEEEcCCCCC--CCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEeC
Confidence 99999999999997764 488999999999999999999999999999998753
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-97 Score=774.09 Aligned_cols=441 Identities=22% Similarity=0.327 Sum_probs=415.6
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||..|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 36 tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 114 (506)
T 3rh9_A 36 TGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAA 114 (506)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeee-ecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVP-EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~ 162 (493)
+.+++++..++++.... .+. ..+...++++ +|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 115 ~~l~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~ 190 (506)
T 3rh9_A 115 GFFDYCAKHISALDSHT-IPE---KPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTM 190 (506)
T ss_dssp HHHHHHHHHGGGGCCEE-CSC---CGGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHH
T ss_pred HHHHHHHHHHHHhcCcc-ccc---CCCceeeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHH
Confidence 99999999998875432 111 1244567888 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCC
Q 011107 163 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (493)
Q Consensus 163 ~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daD 239 (493)
..+++++.++ +|+|+||+|+| +.+.+++|++|+ ||+|+||||+++|+.|++.+++++||+++|+|||||+||++|||
T Consensus 191 ~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~l~~v~lElGGk~p~iV~~dAD 270 (506)
T 3rh9_A 191 IAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDAD 270 (506)
T ss_dssp HHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTTTCEEEEECCCCCEEEECTTSC
T ss_pred HHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhcCCceEEecCCCCceEECCCCC
Confidence 9999999999 99999999999 567899999996 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHH
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (493)
+|.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++++.|+|. +++++||++++++++++.++|+++.
T Consensus 271 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~ 349 (506)
T 3rh9_A 271 LEAAADNLIANKF-RGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDAL 349 (506)
T ss_dssp HHHHHHHHHHHHH-GGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999884 7899999999999999999999996
Q ss_pred h-CCeEEeCCcc-CC-CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 011107 319 V-SGKIVHGGER-DK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (493)
Q Consensus 319 ~-~~~~~~gg~~-~~-~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 395 (493)
+ ++++++||.. +. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++
T Consensus 350 ~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~ 429 (506)
T 3rh9_A 350 DKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQ 429 (506)
T ss_dssp HTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHH
T ss_pred HCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 5 6799999975 33 6899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 396 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 396 ~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|+++.
T Consensus 430 ~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~ 484 (506)
T 3rh9_A 430 RVAAGLRFGHVGWNTGTG--PTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGF 484 (506)
T ss_dssp HHHHHCCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC-
T ss_pred HHHHhCCcceEEEcCCCC--CCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcC
Confidence 999999999999999765 3578999999999999999999999999999998875
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-96 Score=773.98 Aligned_cols=442 Identities=22% Similarity=0.362 Sum_probs=415.8
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHh--hhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTF--ASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (493)
+++++++++..+.+|+++|+++|++|| ..|+.++.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..
T Consensus 57 tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~ 135 (520)
T 3ed6_A 57 NQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESY-ADMDD 135 (520)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHH
Confidence 578999999999999999999999999 899999999999999999999999999999999999999999997 59999
Q ss_pred HHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
+++.+++++...+.+... ..+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|++
T Consensus 136 ~~~~~~~~a~~~~~~~g~-~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t 212 (520)
T 3ed6_A 136 IHNVFMYFAGLADKDGGE-MIDS--PIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLT 212 (520)
T ss_dssp HHHHHHHHHHHTTSCCEE-EECC--SSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHH
T ss_pred HHHHHHHHHHHHHHhcCe-eccc--CCCCCcccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHH
Confidence 999999999988765432 1111 1123456889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCC
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~da 238 (493)
+.++++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+||||+++|+.|++.+++++||+++|+|||||+||++||
T Consensus 213 ~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~~l~~v~lELGGk~p~IV~~dA 292 (520)
T 3ed6_A 213 TIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDA 292 (520)
T ss_dssp HHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTS
T ss_pred HHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhcCCCEEEEcCCCCeeEECCCC
Confidence 99999999999 99999999999 668899999996 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHH
Q 011107 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 239 Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
|+|.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+|. +++++||++++.++++++++|+++
T Consensus 293 Dl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a 371 (520)
T 3ed6_A 293 DFELAVDQALNGGY-FHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVA 371 (520)
T ss_dssp CHHHHHHHHHHHHH-GGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-hcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999985 789999999999999999999998
Q ss_pred Hh-CCeEEeCCccC-----CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCH
Q 011107 318 KV-SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 391 (493)
Q Consensus 318 ~~-~~~~~~gg~~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~ 391 (493)
.+ ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 372 ~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 451 (520)
T 3ed6_A 372 KAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDI 451 (520)
T ss_dssp HHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCH
T ss_pred HhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCH
Confidence 65 66999999764 4689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 392 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 392 ~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++++++++|+|+||++..+ .+.+||||+|.||+|+++|++++++||+.|+|+++.
T Consensus 452 ~~a~~~a~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~~~ 510 (520)
T 3ed6_A 452 GKAQRVANKLKLGTVWINDFHPY--FAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNT 510 (520)
T ss_dssp HHHHHHHHHSCCSEEEESCSCCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEES
T ss_pred HHHHHHHHHCCcceEEECCCCCC--CCCCCcCCcCcCcCCccchHHHHHHhhceEEEEEcC
Confidence 99999999999999999997754 578999999999999999999999999999998875
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-97 Score=772.82 Aligned_cols=441 Identities=24% Similarity=0.356 Sum_probs=412.3
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 37 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 115 (484)
T 3ifg_A 37 TGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAK-GEIAYAA 115 (484)
T ss_dssp TCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999999996 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...++.... ..+ ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 116 ~~l~~~a~~~~~~~g~-~~~--~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~ 192 (484)
T 3ifg_A 116 SFIEWFAEEGKRVAGD-TLP--TPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSAL 192 (484)
T ss_dssp HHHHHHHHHHTTCCEE-EEC--CSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHhhcCc-ccc--ccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 9999999877654321 111 1112345688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+++++.++ +|+|+||+|+| +.+.+++|++|+ ||+|+||||+++|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 193 ~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~iV~~dADl 272 (484)
T 3ifg_A 193 AMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADL 272 (484)
T ss_dssp HHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccCCceEEecCCCCeEEECCCCCH
Confidence 999999999 99999999999 457899999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|+| ++++++||++++.+++++.++|+++.+
T Consensus 273 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 351 (484)
T 3ifg_A 273 DAAVEGAIASKY-RNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALA 351 (484)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 999999999999999999999999999999999998888 478999999999999999999999865
Q ss_pred -CCeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 320 -SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 320 -~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++
T Consensus 352 ~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 431 (484)
T 3ifg_A 352 KGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRV 431 (484)
T ss_dssp TTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHH
T ss_pred CCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 67999999764 3689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|++.
T Consensus 432 ~~~l~aG~v~iN~~~~--~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 432 AEALEYGMVGINTGLI--SNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp HHHCCCSEEEESCSCC--CCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred HHhCCcceEEEcCCCC--CCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 9999999999998543 568899999999999999999999999999999763
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-96 Score=772.99 Aligned_cols=444 Identities=21% Similarity=0.301 Sum_probs=413.3
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (493)
.++++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++..|+..
T Consensus 61 tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~ 140 (517)
T 2o2p_A 61 DGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGM 140 (517)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 5789999999999999999999999999 99999999999999999999999999999999999999999986469999
Q ss_pred HHHHHHHHHHHHHhhcCCcccccccccCCC-CceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchH
Q 011107 82 LKTSIKSALKELKHWMTPEKAKTSITTFPS-SAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~ 160 (493)
+++.+++++..++++.... .+......+. ..++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 141 ~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ 219 (517)
T 2o2p_A 141 SIQTFRYFAGWCDKIQGAT-IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219 (517)
T ss_dssp HHHHHHHHHHHGGGCCEEE-ECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCH
T ss_pred HHHHHHHHHHHHHHhcCcc-ccccccCCCCceEEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHH
Confidence 9999999999887765422 1111000122 4688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHh-ccccchhhhcCCCCeEEEcC
Q 011107 161 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDS 236 (493)
Q Consensus 161 ~~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~-~~~~~~~~elgG~~p~iV~~ 236 (493)
++..+++++.++ +|+|++|+|+| +.+.+.+|++|+ |++|+||||+++|+.|++.++ +++||+++|+|||||+||++
T Consensus 220 ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~ 299 (517)
T 2o2p_A 220 TALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFA 299 (517)
T ss_dssp HHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECT
T ss_pred HHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECC
Confidence 999999999999 99999999999 557899999995 999999999999999999999 89999999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHH
Q 011107 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLD 315 (493)
Q Consensus 237 daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~ 315 (493)
|||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++|+
T Consensus 300 dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~ 378 (517)
T 2o2p_A 300 DCDLNKAVQMGMSSVF-FNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQ 378 (517)
T ss_dssp TSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-hcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHH
Confidence 9999999999999999 999999999999999999999999999999999999998 47899999999999999999999
Q ss_pred HHHh-CCeEEeCCccCC-CCceeeceEecCCCCCCcccccccccceeeeEeeCC--HHHHHHHHhcCCCCcEEEEecCCH
Q 011107 316 DDKV-SGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDIINSGTKPLAAYLFTNNK 391 (493)
Q Consensus 316 ~a~~-~~~~~~gg~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~v~t~d~ 391 (493)
++.+ ++++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+| +||||+++|+++|||+++|||+|.
T Consensus 379 ~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 458 (517)
T 2o2p_A 379 RGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDI 458 (517)
T ss_dssp HHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBH
T ss_pred HHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCH
Confidence 9865 679999997643 689999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 392 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 392 ~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 459 ~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 459 NKALYVSDKLQAGTVFINTYNK--TDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFE 516 (517)
T ss_dssp HHHHHHHHHCCSSEEEESCSSC--CCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHhcCEeEEEECCCCC--CCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEee
Confidence 9999999999999999998654 467899999999999999999999999999999764
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-96 Score=774.88 Aligned_cols=443 Identities=22% Similarity=0.351 Sum_probs=415.7
Q ss_pred hhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHH
Q 011107 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT 84 (493)
Q Consensus 5 ~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~ 84 (493)
++++++++.++.+|+++++++|++||..|+.++.++|.++|++++++|+++.++|++++++|+|||..+++. |+..+++
T Consensus 62 ~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~ 140 (538)
T 3qan_A 62 DQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADA-DTAEAID 140 (538)
T ss_dssp TCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHH
T ss_pred CcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHH
Confidence 889999999999999999999999999999999999999999999999999999999999999999999975 9999999
Q ss_pred HHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHH
Q 011107 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (493)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~ 164 (493)
.+++++..+..+..++..+. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 141 ~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~ 217 (538)
T 3qan_A 141 FLEYYARQMIELNRGKEILS---RPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAK 217 (538)
T ss_dssp HHHHHHHHHHHHHTCBCCCC---CTTEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHH
T ss_pred HHHHHHHHHHHhcCCeeecc---cCCcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHH
Confidence 99999998655555443321 124467889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhcc------ccchhhhcCCCCeEEEc
Q 011107 165 LAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH------LTPVLLELGGKSPVVFD 235 (493)
Q Consensus 165 l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~------~~~~~~elgG~~p~iV~ 235 (493)
+++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+||||+++|+.|++.++++ +||+++|+|||||+||+
T Consensus 218 l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~ 297 (538)
T 3qan_A 218 FVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVD 297 (538)
T ss_dssp HHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCEEEEC
T ss_pred HHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccccccccccEEEecCCCCceEEC
Confidence 99999998 99999999999 667899999996 99999999999999999999988 99999999999999999
Q ss_pred CCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHH
Q 011107 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLL 314 (493)
Q Consensus 236 ~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i 314 (493)
+|||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|+|. +++++||++++.+++++.++|
T Consensus 298 ~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i 376 (538)
T 3qan_A 298 RDADLDLAAESILVSAF-GFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYI 376 (538)
T ss_dssp TTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH-hcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999999999999999999999985 789999999999999999999
Q ss_pred HHHHhCCeEEeCCccCC-CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 315 DDDKVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 315 ~~a~~~~~~~~gg~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
+++.+.|++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++
T Consensus 377 ~~a~~~G~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~ 456 (538)
T 3qan_A 377 EIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAH 456 (538)
T ss_dssp HHHHHHSEEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHH
T ss_pred HHHHHCCeEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHH
Confidence 99876449999998654 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCC-CcchHHHHHHhhhccEEeEec
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G-~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++++++|+|+||+...+...+.+||||+|.||+| +++|++|+++||+.|+|+++.
T Consensus 457 a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~~ 516 (538)
T 3qan_A 457 IEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEMY 516 (538)
T ss_dssp HHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEEC
T ss_pred HHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEec
Confidence 99999999999999995443434788999999999999 999999999999999998875
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-97 Score=773.06 Aligned_cols=441 Identities=22% Similarity=0.369 Sum_probs=412.7
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|+++++.|+|||..+++ .|+..++
T Consensus 57 tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 135 (504)
T 3ek1_A 57 DGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEAR-GEVLYAA 135 (504)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+..... ... ....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 136 ~~~~~~a~~~~~~~g~-~~~--~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~ 212 (504)
T 3ek1_A 136 SFIEWFAEEAKRVYGD-TIP--APQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTAL 212 (504)
T ss_dssp HHHHHHHHHHTTCCEE-EEC--CSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCc-ccc--cccccccceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHH
Confidence 9999998877654321 111 1112345688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+++++.++ +|+|++|+|+| +.+.++.|++|+ ||+|+||||+++|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 213 ~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~IV~~dADl 292 (504)
T 3ek1_A 213 ALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADL 292 (504)
T ss_dssp HHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCEEEEECTTSCH
T ss_pred HHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCCeEecCCCCCeeEEcCCCCH
Confidence 999999999 99999999998 567899999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|+| ++++++||++++.++++++++|+++.+
T Consensus 293 ~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 371 (504)
T 3ek1_A 293 DAAVDGAMVSKY-RNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVS 371 (504)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHH
Confidence 999999999999 999999999999999999999999999999999998888 478999999999999999999999865
Q ss_pred -CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 011107 320 -SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (493)
Q Consensus 320 -~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 398 (493)
++++++||.. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.+++
T Consensus 372 ~Ga~v~~gG~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a 450 (504)
T 3ek1_A 372 KGAKLITGGKE-LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVS 450 (504)
T ss_dssp TTCEEEECCCE-EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHH
T ss_pred CCCEEEeCCcc-CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHH
Confidence 6799999975 36899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 399 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 399 ~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|+++.
T Consensus 451 ~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 451 EALEYGMVGHNTGLI--SNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp HHSCCSEEEESCSCC--CCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEEC
T ss_pred HhCCcCeEEECCCCC--CCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEec
Confidence 999999999998653 5688999999999999999999999999999998764
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-96 Score=766.58 Aligned_cols=442 Identities=23% Similarity=0.346 Sum_probs=413.3
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++..|+..++
T Consensus 47 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~ 126 (495)
T 1wnd_A 47 TGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIV 126 (495)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999998633999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++.++++... ..+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 127 ~~~~~~a~~~~~~~g~-~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~ 203 (495)
T 1wnd_A 127 DVFRFFAGAARCLNGL-AAGE--YLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTAL 203 (495)
T ss_dssp HHHHHHHHHTTCCEEE-CBEE--EETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHhcCc-cccC--CCCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHH
Confidence 9999999988776432 1111 111235678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~alP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+++++.+++|+|++|+|+| +.+.+.+|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+|
T Consensus 204 ~l~~l~~ealP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~ 283 (495)
T 1wnd_A 204 KLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIE 283 (495)
T ss_dssp HHHHHHTTTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHH
T ss_pred HHHHHHHHhCCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCccccccCCCCeEEECCcCCHH
Confidence 99999999999999999999 667899999996 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++++.|+|. +++++||++++.+++++.++++++.+
T Consensus 284 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~ 362 (495)
T 1wnd_A 284 AVVEGVRTFGY-YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKAT 362 (495)
T ss_dssp HHHHHHHHHTT-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH-hcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhC
Confidence 99999999999 9999999999999999999999999999999999999985 68999999999999999999999865
Q ss_pred C-CeEEeCCc-cCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 320 S-GKIVHGGE-RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 320 ~-~~~~~gg~-~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
+ +++++||. .++.|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++
T Consensus 363 G~a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~ 442 (495)
T 1wnd_A 363 GHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRV 442 (495)
T ss_dssp SSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHH
T ss_pred CCeEEEECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHH
Confidence 6 79999997 544689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 443 ~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 443 SARLQYGCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp HHHCCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHhCCcceEEECCCCC--CCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 9999999999998654 457899999999999999999999999999999764
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-96 Score=766.56 Aligned_cols=441 Identities=24% Similarity=0.376 Sum_probs=414.2
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||..|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 45 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 123 (503)
T 1a4s_A 45 TGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAW 123 (503)
T ss_dssp TCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999996 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++.++++.. +..... .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.
T Consensus 124 ~~~~~~a~~~~~~~g-~~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~ 199 (503)
T 1a4s_A 124 QCIEYYAGLAPTLSG-QHIQLP---GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGV 199 (503)
T ss_dssp HHHHHHHHHGGGCCE-EEEECG---GGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcC-CcccCC---CCceeEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 999999998887654 222211 2335688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+++++.++ +|+|++|+|+|+.+.+..|++|+ +|+|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+|
T Consensus 200 ~l~~l~~~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~~~v~lELGGk~p~IV~~dADl~ 279 (503)
T 1a4s_A 200 ILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELE 279 (503)
T ss_dssp HHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHH
T ss_pred HHHHHHHHhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceEEecCCcCeEEECCCCCHH
Confidence 999999999 99999999999338899999996 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+|. +++++||++++++++++.++++++.+
T Consensus 280 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~ 358 (503)
T 1a4s_A 280 NAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKE 358 (503)
T ss_dssp HHHHHHHHTTC-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999 9999999999999999999999999999999999999885 68999999999999999999999865
Q ss_pred CCeEEeCCccC-------CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 011107 320 SGKIVHGGERD-------KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (493)
Q Consensus 320 ~~~~~~gg~~~-------~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~ 392 (493)
++++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 359 Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 438 (503)
T 1a4s_A 359 GARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDIS 438 (503)
T ss_dssp TCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred CCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHH
Confidence 67999999764 35899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 393 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 393 ~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+++.
T Consensus 439 ~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 496 (503)
T 1a4s_A 439 RAHRVAANLEAGTCYINTYSI--SPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEM 496 (503)
T ss_dssp HHHHHHHHSCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECC
T ss_pred HHHHHHHHCceeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhcCceEEEEcc
Confidence 999999999999999998765 4578999999999999999999999999999998764
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-95 Score=763.72 Aligned_cols=436 Identities=23% Similarity=0.358 Sum_probs=408.7
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|+++++.|+|||..+++..|+..++
T Consensus 50 tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~ 129 (497)
T 3i44_A 50 TEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGS 129 (497)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999756999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceee-eecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIV-PEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~ 162 (493)
+.++++++.+..+...... ..+...++. ++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++
T Consensus 130 ~~~~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~ 204 (497)
T 3i44_A 130 SHIRNFIKAYKEFSFQEAL-----IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSA 204 (497)
T ss_dssp HHHHHHHHHHHHCCSEEES-----STTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHH
T ss_pred HHHHHHHHHhhcccccccc-----cCCceeEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHH
Confidence 9999999888765432111 013446778 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCC
Q 011107 163 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (493)
Q Consensus 163 ~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daD 239 (493)
..+++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+||||+++|+.|++.+++++||+++|+|||||+||++|||
T Consensus 205 ~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dAD 284 (497)
T 3i44_A 205 MLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFADAD 284 (497)
T ss_dssp HHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSC
T ss_pred HHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceeeccCCCCceEECCChh
Confidence 9999999999 99999999999 668899999996 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHH
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (493)
|.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|||. +++++||++++.++++++++|+++.
T Consensus 285 -~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~ 362 (497)
T 3i44_A 285 -IDALQRGVRHCF-YNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGI 362 (497)
T ss_dssp -TTHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHH-hcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999995 7899999999999999999999986
Q ss_pred h-CCeEEeCCc-cCC---CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 319 V-SGKIVHGGE-RDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 319 ~-~~~~~~gg~-~~~---~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
+ ++++++||. .+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++
T Consensus 363 ~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~ 442 (497)
T 3i44_A 363 DEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSK 442 (497)
T ss_dssp HTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHH
T ss_pred HCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHH
Confidence 5 679999994 332 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
+.++++++++|+|+||. . ...+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 443 a~~~a~~l~aG~V~iN~-~--~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 443 CRRIAAQVRSGMVEVNG-H--ELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp HHHHHHHSCCSEEEETT-C--CCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEES
T ss_pred HHHHHHhCCcCeEEECC-C--CCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEE
Confidence 99999999999999994 2 34678999999999999999999999999999985
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-96 Score=769.86 Aligned_cols=441 Identities=26% Similarity=0.377 Sum_probs=415.8
Q ss_pred hhhhcccCCCCHHHHHHHHHHHHHHh--hhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 5 EETKKKNEVFDAEAASLFVKELRGTF--ASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 5 ~~~~~~~~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
++++++++.++.+|+++++++|++|| ..|+.++.++|.++|++++++|+++.++|++++++|+|||..++ ..|+..+
T Consensus 49 g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~ 127 (528)
T 3u4j_A 49 GEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQA-RGEIGFC 127 (528)
T ss_dssp TCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHH
T ss_pred CcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHH
Confidence 78999999999999999999999999 78999999999999999999999999999999999999999999 4799999
Q ss_pred HHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHH
Q 011107 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~ 162 (493)
++.++++++.++++.. +..+. ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 128 ~~~l~~~a~~~~~~~~-~~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~ 204 (528)
T 3u4j_A 128 ADLWSYAAGQARALEG-QTHNN--IGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTS 204 (528)
T ss_dssp HHHHHHHHHHHTTCCE-EEECC--SCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHH
T ss_pred HHHHHHHHHHHHHhcC-eeecc--CCCCceeEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHH
Confidence 9999999999887653 22211 11234578899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCC
Q 011107 163 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (493)
Q Consensus 163 ~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daD 239 (493)
..+++++.++ +|+|+||+|+| +.+.+++|++|+ ||+|+||||+++|+.|++.+++++||+++|+|||||+||++|||
T Consensus 205 ~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dAD 284 (528)
T 3u4j_A 205 IRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADAD 284 (528)
T ss_dssp HHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSC
T ss_pred HHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHHhcCCceEEecCCCCeeEECCCCC
Confidence 9999999999 99999999999 678899999996 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHH
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (493)
+|.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|+|. +++++||++++++++++.++++++.
T Consensus 285 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~ 363 (528)
T 3u4j_A 285 LDAAADGIAYGVY-HNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGI 363 (528)
T ss_dssp HHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-hcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999885 6899999999999999999999986
Q ss_pred h-CCeEEeCCccCC--CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 011107 319 V-SGKIVHGGERDK--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (493)
Q Consensus 319 ~-~~~~~~gg~~~~--~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 395 (493)
+ ++++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++
T Consensus 364 ~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~ 443 (528)
T 3u4j_A 364 TSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETAL 443 (528)
T ss_dssp HTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHH
T ss_pred HCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHH
Confidence 5 669999997644 6899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 396 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 396 ~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|+++.
T Consensus 444 ~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 498 (528)
T 3u4j_A 444 QTIRRIRAGRCWINSVID--GTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTL 498 (528)
T ss_dssp HHHHHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEES
T ss_pred HHHHhCCeeEEEECCCCC--CCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeC
Confidence 999999999999999764 4688999999999999999999999999999999875
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-96 Score=767.50 Aligned_cols=441 Identities=24% Similarity=0.361 Sum_probs=412.3
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+|+++++++|++||..|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 36 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~ 114 (505)
T 3prl_A 36 SGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAI-GEVSRTA 114 (505)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999999997 4999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccC---CCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTF---PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~ 160 (493)
+.++++++.++++.... .+...... +...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.
T Consensus 115 ~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ 193 (505)
T 3prl_A 115 DIIRHTADEALRLNGET-LKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSL 193 (505)
T ss_dssp HHHHHHHHHHHTCCEEE-EEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHH
T ss_pred HHHHHHHHHHHHhcCcc-ccccccccccCCceeEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChH
Confidence 99999999988765422 11110000 234678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCC
Q 011107 161 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 161 ~~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~d 237 (493)
++..|++++.++ +|+|++|+|+| +.+.++.|++|+ +|+|+||||+++|+.|++.++ +||+++|+|||||+||++|
T Consensus 194 ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~d 271 (505)
T 3prl_A 194 SGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVVLELGGKDPAIVLDD 271 (505)
T ss_dssp HHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHCC--SSCEEEECCCCEEEEECTT
T ss_pred HHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHcc--CCcEEEECCCCCCCccCCC
Confidence 999999999998 99999999999 567899999995 999999999999999999887 8999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
||+|.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++++.|||.+++++||++++.+++++.++++++
T Consensus 272 ADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~rv~~~i~~a 350 (505)
T 3prl_A 272 ADLKLTASQIVSGAF-SYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDA 350 (505)
T ss_dssp CCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-hcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCCCcCcCCcccCHHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999988888999999999999999999998
Q ss_pred Hh-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHH
Q 011107 318 KV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396 (493)
Q Consensus 318 ~~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 396 (493)
.+ ++++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus 351 ~~~Ga~v~~gG~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~ 428 (505)
T 3prl_A 351 LENGATLLSGNKR--QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAIN 428 (505)
T ss_dssp HHTTCEEEECCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHH
T ss_pred HHCCCEEEecCCC--CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHH
Confidence 65 6699999974 68999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 397 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 397 ~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+++++++|+|+||+++.+ ..+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 429 ~~~~l~aG~V~iN~~~~~-~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~~ 483 (505)
T 3prl_A 429 IGKHLEVGTVHINAKTER-GPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNL 483 (505)
T ss_dssp HHHTSCSSEEEESSCCCS-CSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred HHHHCCeeEEEEcCCCCC-CCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEeC
Confidence 999999999999997653 4688999999999999999999999999999998875
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-96 Score=773.40 Aligned_cols=446 Identities=25% Similarity=0.333 Sum_probs=412.7
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+|+++++++|++||..|+.+|.++|.++|++++++|+++.++|++++++|+|||..++ |+..++
T Consensus 39 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~ 115 (517)
T 3r31_A 39 TGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQET---IVADPT 115 (517)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999987 999999
Q ss_pred HHHHHHHHHHHh---hcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchH
Q 011107 84 TSIKSALKELKH---WMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (493)
Q Consensus 84 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~ 160 (493)
+.+++++...+. +...+..+. ..+. .+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.
T Consensus 116 ~~~~~~a~~~~~~~~~~~g~~~~~---~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ 191 (517)
T 3r31_A 116 SGADAFEFFGGIAPSALNGDYIPL---GGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPL 191 (517)
T ss_dssp HHHHHHHHHHHHHHHHTCCCEEEC---SSSE-EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCS
T ss_pred HHHHHHHHHhhhccccccCccccc---CCCc-ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHH
Confidence 999999988876 232222221 1233 788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCC
Q 011107 161 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (493)
Q Consensus 161 ~~~~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~da 238 (493)
++..+++++.++ +|+|+||+|+|+.+.++.|++|+ ||+|+||||+++|+.|++.+++++||+++|+|||||+||++||
T Consensus 192 t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lElGGk~p~IV~~dA 271 (517)
T 3r31_A 192 GALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFDDA 271 (517)
T ss_dssp HHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTS
T ss_pred HHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHhhcCCCcEEEEcCCcCeEEEecCC
Confidence 999999999999 99999999999778899999996 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHH
Q 011107 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 239 Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
|+|.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|. +++++||++++++++++.++|+++
T Consensus 272 Dl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a 350 (517)
T 3r31_A 272 DIESAVGGAMLGNF-YSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKG 350 (517)
T ss_dssp CHHHHHHHHHHHHT-SCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh-cCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999985 789999999999999999999998
Q ss_pred Hh-CCeEEeCCccC----CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 011107 318 KV-SGKIVHGGERD----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (493)
Q Consensus 318 ~~-~~~~~~gg~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~ 392 (493)
.+ ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 351 ~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~ 430 (517)
T 3r31_A 351 KAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLA 430 (517)
T ss_dssp HHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHH
T ss_pred HhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHH
Confidence 65 77999999312 26899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEecCCCCCCc
Q 011107 393 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPV 459 (493)
Q Consensus 393 ~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~~~~~~~~ 459 (493)
+++++++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|+++....+.++
T Consensus 431 ~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~~~~~~ 495 (517)
T 3r31_A 431 RAHRVVDGLEAGTLWINTYNL--CPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVSTGKVDAPY 495 (517)
T ss_dssp HHHHHHHHSCCSEEEESSCCC--CCTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEECCC------
T ss_pred HHHHHHHHCCcceEEECCCCC--CCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEcCCCCCCCc
Confidence 999999999999999999653 56889999999999999999999999999999998764433333
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-95 Score=765.38 Aligned_cols=441 Identities=24% Similarity=0.346 Sum_probs=414.1
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh---hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA---SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA 80 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~ 80 (493)
.++++++++.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|+++.++|++++++|+|||..++...|+.
T Consensus 45 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~ 124 (501)
T 1bxs_A 45 TEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLG 124 (501)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 5789999999999999999999999999 8999999999999999999999999999999999999999987657999
Q ss_pred HHHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchH
Q 011107 81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (493)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~ 160 (493)
.+++.+++++..++++.+.. .+. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+
T Consensus 125 ~~~~~~~~~a~~~~~~~g~~-~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ 200 (501)
T 1bxs_A 125 GCIKTLRYCAGWADKIQGRT-IPM---DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPL 200 (501)
T ss_dssp HHHHHHHHHHHHGGGCCEEE-ECC---SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCH
T ss_pred HHHHHHHHHHHHHHHhhCCe-eec---cCCcceeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHH
Confidence 99999999999988875431 111 12334688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHh-ccccchhhhcCCCCeEEEcC
Q 011107 161 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDS 236 (493)
Q Consensus 161 ~~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~-~~~~~~~~elgG~~p~iV~~ 236 (493)
++..+++++.++ +|+|++|+|+| +.+.+++|++|+ ||+|+||||+.+|+.|++.++ +++||+++|+|||||+||++
T Consensus 201 t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~ 280 (501)
T 1bxs_A 201 TALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFA 280 (501)
T ss_dssp HHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECT
T ss_pred HHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECC
Confidence 999999999999 99999999999 667899999996 999999999999999999999 99999999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 011107 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (493)
Q Consensus 237 daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~ 315 (493)
|||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|||. +++++||++++.+++++.++|+
T Consensus 281 dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~ 359 (501)
T 1bxs_A 281 DADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIE 359 (501)
T ss_dssp TSCHHHHHHHHHHHHH-TTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-hcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999999999999999985 6899999999999999999999
Q ss_pred HHHh-CCeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 316 DDKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 316 ~a~~-~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
++.+ ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++
T Consensus 360 ~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 439 (501)
T 1bxs_A 360 SGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDK 439 (501)
T ss_dssp HHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHH
T ss_pred HHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHH
Confidence 9865 67999999763 368999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++++++|+|+||++.. ..+.+||||+|.||+|+++|++++++|++.|+|.++
T Consensus 440 a~~~~~~l~aG~V~iN~~~~--~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~ 495 (501)
T 1bxs_A 440 AITVSSALQSGTVWVNCYSV--VSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIK 495 (501)
T ss_dssp HHHHHHHSCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHhcCeeEEEECCCCC--CCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEc
Confidence 99999999999999998654 357899999999999999999999999999999875
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-96 Score=767.73 Aligned_cols=442 Identities=21% Similarity=0.334 Sum_probs=414.1
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 37 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~ 115 (497)
T 3k2w_A 37 TGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAE-MEVDVTA 115 (497)
T ss_dssp SCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++..++++.... .+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 116 ~~~~~~a~~~~~~~~~~-~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 192 (497)
T 3k2w_A 116 TFIDYGCDNALTIEGDI-LPS--DNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATT 192 (497)
T ss_dssp HHHHHHHHTTTTCCEEE-EEC--SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHH
T ss_pred HHHHHHHHHHHHhcCcc-ccc--CCCCcceeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 99999999888765432 111 122445788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+||||+++|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 193 ~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl 272 (497)
T 3k2w_A 193 ELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVMDDADL 272 (497)
T ss_dssp HHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTTTCCEEEECCCCEEEEECTTCCH
T ss_pred HHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhcCCCeEEEcCCCCceEEcCCCCH
Confidence 999999999 99999999999 667899999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|. +++++||++++++++++.++++++.+
T Consensus 273 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~ 351 (497)
T 3k2w_A 273 DKAAEDALWGRF-ANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIK 351 (497)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999984 78999999999999999999999865
Q ss_pred -CCeEEeCCcc--C-C--CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 320 -SGKIVHGGER--D-K--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 320 -~~~~~~gg~~--~-~--~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
++++++||.. . . .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++
T Consensus 352 ~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 431 (497)
T 3k2w_A 352 QGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFAN 431 (497)
T ss_dssp HHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHH
T ss_pred CCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHH
Confidence 6799999973 2 2 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++++++|+|+||+++.+ .+.+||||+|.||+|+++|++|+++||+.|+|.++.
T Consensus 432 a~~~~~~l~aG~v~vN~~~~~--~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~ 488 (497)
T 3k2w_A 432 INQAISDLEVGEVYINRGMGE--QHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINE 488 (497)
T ss_dssp HHHHHHHCCSSEEEESCCSCC--CTTSCBCCEETSEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHhCCeeEEEEcCCCCC--CCCCCcCCcCCCcCCccchHHHHHHhcceEEEEEEc
Confidence 999999999999999998764 488999999999999999999999999999998875
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-96 Score=766.71 Aligned_cols=441 Identities=24% Similarity=0.351 Sum_probs=414.1
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh---hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA---SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA 80 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~ 80 (493)
.++++++++.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|+++.++|++++++|+|||..++...|+.
T Consensus 44 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~ 123 (500)
T 1o04_A 44 TGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLD 123 (500)
T ss_dssp TTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 5789999999999999999999999999 8999999999999999999999999999999999999999987656999
Q ss_pred HHHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchH
Q 011107 81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (493)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~ 160 (493)
.+++.++++++.++++.... .+. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+
T Consensus 124 ~~~~~~~~~a~~~~~~~g~~-~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ 199 (500)
T 1o04_A 124 MVLKCLRYYAGWADKYHGKT-IPI---DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199 (500)
T ss_dssp HHHHHHHHHHHHTTTCCEEE-ECC---SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCH
T ss_pred HHHHHHHHHHHHHHHhhCcc-eec---CCCceEEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChH
Confidence 99999999999888775431 111 12334678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHh-ccccchhhhcCCCCeEEEcC
Q 011107 161 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDS 236 (493)
Q Consensus 161 ~~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~-~~~~~~~~elgG~~p~iV~~ 236 (493)
++..+++++.++ +|+|+||+|+| +.+.+..|++|+ ||+|+||||+.+|+.|++.++ +++||+++|+|||||+||++
T Consensus 200 t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~ 279 (500)
T 1o04_A 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMS 279 (500)
T ss_dssp HHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECT
T ss_pred HHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECC
Confidence 999999999999 99999999999 677899999996 999999999999999999999 99999999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 011107 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (493)
Q Consensus 237 daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~ 315 (493)
|||+|.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|||. +++++||++++.+++++.++++
T Consensus 280 dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~ 358 (500)
T 1o04_A 280 DADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYIN 358 (500)
T ss_dssp TSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh-ccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999999999999999985 6899999999999999999999
Q ss_pred HHHh-CCeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 316 DDKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 316 ~a~~-~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
++.+ ++++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++
T Consensus 359 ~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 438 (500)
T 1o04_A 359 TGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDK 438 (500)
T ss_dssp HHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHH
T ss_pred HHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHH
Confidence 9865 67999999764 358999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|.++
T Consensus 439 a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~ 494 (500)
T 1o04_A 439 ANYLSQALQAGTVWVNCYDV--FGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 494 (500)
T ss_dssp HHHHHHHCCSSEEEESCSSC--CCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEE
T ss_pred HHHHHHhCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEe
Confidence 99999999999999998764 457899999999999999999999999999999875
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-95 Score=764.81 Aligned_cols=440 Identities=26% Similarity=0.368 Sum_probs=413.2
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 81 (493)
.++++++++.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|++++++|++++++|+|||..+++..|+..
T Consensus 33 tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~ 112 (495)
T 3b4w_A 33 TGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMG 112 (495)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 5789999999999999999999999999 99999999999999999999999999999999999999999986469999
Q ss_pred HHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
+++.++++++.++++.... .+. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|++
T Consensus 113 ~~~~~~~~a~~~~~~~g~~-~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t 188 (495)
T 3b4w_A 113 SMGAMNYFAGAADKVTWTE-TRT---GSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLT 188 (495)
T ss_dssp HHHHHHHHHTCGGGSCSEE-EEE---ETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHH
T ss_pred HHHHHHHHHHHHHHhcCCc-ccC---CCCceEEEEEccCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHH
Confidence 9999999998888765422 111 112356889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCC
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daD 239 (493)
+..+++++.++ +|+|++|+|+|+.+.+.+|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++|||
T Consensus 189 ~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~pv~lELGGk~p~iV~~dAD 268 (495)
T 3b4w_A 189 ANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIILEDVD 268 (495)
T ss_dssp HHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTCC
T ss_pred HHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceeecCCCcceEEECCCCC
Confidence 99999999999 99999999999777899999995 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHH
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDK 318 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (493)
+|.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+| ++++++||++++++++++.++++++.
T Consensus 269 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~ 347 (495)
T 3b4w_A 269 LAAAIPMMVFSGV-MNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGI 347 (495)
T ss_dssp HHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-hcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHH
Confidence 9999999999999 999999999999999999999999999999999999998 47899999999999999999999986
Q ss_pred h-CCeEEeCCccCC---CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 319 V-SGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 319 ~-~~~~~~gg~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
+ ++++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++
T Consensus 348 ~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a 427 (495)
T 3b4w_A 348 EEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKG 427 (495)
T ss_dssp HTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHH
T ss_pred hCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHH
Confidence 5 679999997643 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
+++++++++|+|+||++. ..+.+||||+|.||+|+++|++++++||+.|+|+++
T Consensus 428 ~~~~~~l~aG~V~iN~~~---~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~ 481 (495)
T 3b4w_A 428 IKISQQIRTGTYGINWYA---FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLP 481 (495)
T ss_dssp HHHHHHSCCSCCEESSCC---CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECC
T ss_pred HHHHHhCCEeEEEECCCC---CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEc
Confidence 999999999999999864 457899999999999999999999999999999875
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-95 Score=763.18 Aligned_cols=444 Identities=22% Similarity=0.331 Sum_probs=415.2
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 61 t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 139 (516)
T 1uzb_A 61 PSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAI 139 (516)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 378999999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++..++++..+.... ....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 140 ~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~ 217 (516)
T 1uzb_A 140 DFIEYYARAALRYRYPAVEV--VPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGA 217 (516)
T ss_dssp HHHHHHHHHHGGGCSSCCCC--CCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHhcCCcccc--cCCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHH
Confidence 99999999998876543210 1112335678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHh------ccccchhhhcCCCCeEEE
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPVVF 234 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~------~~~~~~~~elgG~~p~iV 234 (493)
.+++++.++ +|+|++|+|+| +.+.+.+|++|+ ||+|+||||+.+|+.|++.++ +++||+++|+|||||+||
T Consensus 218 ~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV 297 (516)
T 1uzb_A 218 KVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIV 297 (516)
T ss_dssp HHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEE
T ss_pred HHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeE
Confidence 999999999 99999999999 677899999996 999999999999999999998 789999999999999999
Q ss_pred cCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHH
Q 011107 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLL 314 (493)
Q Consensus 235 ~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i 314 (493)
++|||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|+|++++++||++++.+++++.+++
T Consensus 298 ~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i 376 (516)
T 1uzb_A 298 DETADFDLAAEGVVVSAY-GFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYI 376 (516)
T ss_dssp CTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH-hCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCCccccccCCCCCHHHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999999999999999887789999999999999999999
Q ss_pred HHHHhCCeEEeCCcc-CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 315 DDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 315 ~~a~~~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
+++.+.|++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++
T Consensus 377 ~~a~~~G~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~ 456 (516)
T 1uzb_A 377 EIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREH 456 (516)
T ss_dssp HHHTTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHH
T ss_pred HHHHHCCCEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHH
Confidence 998776699999976 3468999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCC-cchHHHHHHhhhccEEeEe
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~-~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++++++|+|+||+++.+...+.+||||+|.||+|+ ++|.+++++||+.|+|+++
T Consensus 457 a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 457 LEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515 (516)
T ss_dssp HHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred HHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEec
Confidence 999999999999999987665566789999999999995 7899999999999999764
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-95 Score=765.77 Aligned_cols=443 Identities=20% Similarity=0.276 Sum_probs=412.4
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||..|+.++.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 51 tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~ 129 (521)
T 4e4g_A 51 TGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGL 129 (521)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999996 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+.. ....... ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 130 ~~l~~~a~~~~~~-~~~~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~ 206 (521)
T 4e4g_A 130 EVCEFVIGIPHLQ-KSEFTEG--AGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPI 206 (521)
T ss_dssp HHHHHHHTHHHHT-CEEEEEE--EETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHH
T ss_pred HHHHHHHHHHHHh-cCccccc--CCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHH
Confidence 9999998765543 2221111 112345688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+++++.++ +|+|+||+|+|+.+.+.+|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++
T Consensus 207 ~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~ 286 (521)
T 4e4g_A 207 RLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLD 286 (521)
T ss_dssp HHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHH
Confidence 999999999 99999999999888889999996 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCc-chHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
.|++.+++++| .|+||.|++++|||||++ +||+|+++|++++++++.|+| ++++++||++++++++++.++|+++.+
T Consensus 287 ~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~ 365 (521)
T 4e4g_A 287 QAANALIGAGY-GSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIE 365 (521)
T ss_dssp HHHHHHHHHHH-GGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999 999999999999999999 999999999999999998888 578999999999999999999999865
Q ss_pred -CCeEEeCCccC-----CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 320 -SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 320 -~~~~~~gg~~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 366 ~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~ 445 (521)
T 4e4g_A 366 QGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDA 445 (521)
T ss_dssp HTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHH
T ss_pred CCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHH
Confidence 67999999642 468999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCC--CcchHHHHHHhhhccEEeEec
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G--~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++++++|+|+||+++. ...+.+||||+|.||+| +++|++|+++||+.|+|+++.
T Consensus 446 a~~~~~~l~aG~V~vN~~~~-~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~ 505 (521)
T 4e4g_A 446 ARDFASRINIGMVGVNVPIP-VPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSRW 505 (521)
T ss_dssp HHHHHHHCCCSEEEESCSSC-CCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEECC
T ss_pred HHHHHHhCCeeeEEECCCCC-CCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEEec
Confidence 99999999999999998753 34578999999999999 789999999999999998764
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-95 Score=759.12 Aligned_cols=435 Identities=28% Similarity=0.426 Sum_probs=409.2
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||..|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 21 tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~ 99 (486)
T 3pqa_A 21 SLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQAR-VEVERSI 99 (486)
T ss_dssp TCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++..++++.... .+. .+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 100 ~~~~~~a~~~~~~~~~~-~~~----~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 174 (486)
T 3pqa_A 100 GTFKLAAFYVKEHRDEV-IPS----DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCI 174 (486)
T ss_dssp HHHHHHHHHHHHCCEEE-ECC----TTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCce-ecC----CCceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHH
Confidence 99999999998875422 111 1446788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-----cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcC
Q 011107 164 LLAKLVGEY-----MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236 (493)
Q Consensus 164 ~l~~~l~~a-----lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~ 236 (493)
.+++++.++ +|+|++|+|+| +.+.++.|++|+ ||+|+||||+++|+.|++.++ +||+++|+|||||+||++
T Consensus 175 ~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa--~~~v~lELGGk~p~iV~~ 252 (486)
T 3pqa_A 175 ELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVNPNIVLK 252 (486)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--SSEEEEECCCCEEEEECT
T ss_pred HHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--CCceeeccCCcCcEEEcC
Confidence 999999998 99999999999 456689999995 999999999999999998877 899999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHH
Q 011107 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLD 315 (493)
Q Consensus 237 daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~ 315 (493)
|||+|.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++++++++.++++
T Consensus 253 dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~ 331 (486)
T 3pqa_A 253 DADLNKAVNALIKGSF-IYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVE 331 (486)
T ss_dssp TSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-hcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHH
Confidence 9999999999999999 999999999999999999999999999999999999998 47899999999999999999999
Q ss_pred HHHh-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 316 DDKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 316 ~a~~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
++.. ++++++||.. .|+|++|||+ +++++|++++||+||||++|++|+| ||||+++|+++|||+++|||+|.+++
T Consensus 332 ~a~~~Ga~v~~gG~~--~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a 407 (486)
T 3pqa_A 332 KAIDEGGKLLLGGKR--DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKS 407 (486)
T ss_dssp HHHHTTCEEEECCCE--ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHH
T ss_pred HHHHCCCEEEecCCC--CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHH
Confidence 9865 6799999965 5899999999 9999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+++++++++|+|+||+++.+ ..+.+||||+|.||+|+++|.+++++||+.|+|+++.
T Consensus 408 ~~~~~~l~aG~v~vN~~~~~-~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~ 464 (486)
T 3pqa_A 408 LKFAENLEFGGVVINDSSLF-RQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISK 464 (486)
T ss_dssp HHHHHHSCSSEEEESSCTTC-CCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHhCCcceEEEeCCCCc-CCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcC
Confidence 99999999999999997653 3458999999999999999999999999999998875
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-95 Score=763.48 Aligned_cols=441 Identities=23% Similarity=0.333 Sum_probs=413.0
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 51 tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 129 (515)
T 2d4e_A 51 TNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAA 129 (515)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++.++++... ..+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 130 ~~l~~~a~~~~~~~g~-~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 206 (515)
T 2d4e_A 130 ENFAFYAEYAEHAMED-RTFP--VDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTAT 206 (515)
T ss_dssp HHHHHHHTTGGGTTCE-EECC--BTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCc-cccc--CCCCceeEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHH
Confidence 9999999888776532 1111 012335678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+++++.++ +|+|++|+|+| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 207 ~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~~v~lELGGk~p~iV~~dADl 286 (515)
T 2d4e_A 207 KLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFADADL 286 (515)
T ss_dssp HHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceEecCCCcCeEEEcCCCCH
Confidence 999999999 99999999999 467899999995 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|. +++++||++++++++++.++|+++.+
T Consensus 287 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~ 365 (515)
T 2d4e_A 287 ERALDAVVFQIF-SFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKR 365 (515)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999985 67999999999999999999999865
Q ss_pred -CCeEEeCCccCC---------CCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecC
Q 011107 320 -SGKIVHGGERDK---------NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 389 (493)
Q Consensus 320 -~~~~~~gg~~~~---------~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~ 389 (493)
++++++||..+. .|+|++|||+.+ +++|++++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 366 ~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~ 444 (515)
T 2d4e_A 366 EGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTR 444 (515)
T ss_dssp TTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECS
T ss_pred CCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECC
Confidence 679999997643 589999999999 999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 390 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 390 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+++.
T Consensus 445 d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~~~~ 505 (515)
T 2d4e_A 445 DLERAHRLALELEAGMVYLNSHNV--RHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALPL 505 (515)
T ss_dssp BHHHHHHHHHHSCSSEEEESSSCC--CCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEEEES
T ss_pred CHHHHHHHHHhCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhCceeEEEEcC
Confidence 999999999999999999998654 5678999999999999999999999999999998864
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-95 Score=759.27 Aligned_cols=441 Identities=23% Similarity=0.359 Sum_probs=412.6
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..++
T Consensus 31 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 109 (479)
T 2imp_A 31 TEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAE-VEVAFTA 109 (479)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++.++++.... .+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 110 ~~l~~~a~~~~~~~~~~-~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 186 (479)
T 2imp_A 110 DYIDYMAEWARRYEGEI-IQS--DRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAI 186 (479)
T ss_dssp HHHHHHHTTTTTCCCEE-ECC--SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhhCCc-ccc--CCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 99999998777665432 111 112335688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+++++.++ +|+|++|+|+|+ .+.++.|++|+ +|+|+||||+++|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 187 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl 266 (479)
T 2imp_A 187 AFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADL 266 (479)
T ss_dssp HHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEEcCCcCeEEECCCCCH
Confidence 999999999 999999999994 56799999995 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC--CCCcccccCCHHHHHHHHHHHHHHH
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL--ESKDLSRIVNSNHFARLSKLLDDDK 318 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~--~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (493)
|.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+|. +++++||++++.+++++.++++++.
T Consensus 267 ~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~ 345 (479)
T 2imp_A 267 ELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAV 345 (479)
T ss_dssp HHHHHHHHTTSS-TTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999985 5899999999999999999999986
Q ss_pred h-CCeEEeCCcc-CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHH
Q 011107 319 V-SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396 (493)
Q Consensus 319 ~-~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 396 (493)
+ ++++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++
T Consensus 346 ~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~ 425 (479)
T 2imp_A 346 EEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMK 425 (479)
T ss_dssp HTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHH
T ss_pred HCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHH
Confidence 5 6799999975 3358999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 397 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 397 ~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
+++++++|+|+||++..+ .+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 426 ~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 426 AIKGLKFGETYINRENFE--AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp HHHHCCSSEEEESSCCCC--CTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHhCCEeEEEECCCCCC--CCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 999999999999987654 57899999999999999999999999999999764
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-95 Score=755.28 Aligned_cols=441 Identities=22% Similarity=0.358 Sum_probs=416.4
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+++++++++|++||..|+.+|.++|.++|++++++|+++.++|+++++.|+|||..+++ .|+..++
T Consensus 16 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 94 (462)
T 3etf_A 16 TGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQAR-AEVTKSA 94 (462)
T ss_dssp TCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++.....+...... ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 95 ~~~~~~a~~~~~~~~~~~~----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~ 170 (462)
T 3etf_A 95 ALCDWYAEHGPAMLNPEPT----LVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQ 170 (462)
T ss_dssp HHHHHHHHHHHHHTSCEEC----SSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHH
T ss_pred HHHHHHHHhHHHhcCCccc----CCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHH
Confidence 9999999988877654311 112346788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
++++++.++ +|+|++|+++|+.+.+..|++|+ ++.|+||||+++|+.|++.+++++||+++|+|||||+||++|||++
T Consensus 171 ~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~ 250 (462)
T 3etf_A 171 MIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLE 250 (462)
T ss_dssp HHHHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEECCCCCHH
Confidence 999999998 99999999999888899999995 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+|. +++++||++++++++++.++++++.+
T Consensus 251 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 329 (462)
T 3etf_A 251 LAVKAAVAGRY-QNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAE 329 (462)
T ss_dssp HHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH-hcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHC
Confidence 99999999999 9999999999999999999999999999999999999884 78999999999999999999999865
Q ss_pred CCeEEeCCcc-CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 011107 320 SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (493)
Q Consensus 320 ~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 398 (493)
++++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 330 ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~ 409 (462)
T 3etf_A 330 GARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMA 409 (462)
T ss_dssp TCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHH
T ss_pred CCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 6799999975 357899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 399 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 399 ~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|++++
T Consensus 410 ~~l~aG~v~vN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 410 ARLECGGVFINGYSA--SDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp HHCCSSEEEESSCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred HhCCcceEEECCCCC--CCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 999999999999764 4688999999999999999999999999999998764
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-95 Score=757.92 Aligned_cols=441 Identities=22% Similarity=0.361 Sum_probs=412.4
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+++++++++|++||+.|+.+|.++|.++|++++++|+++.++|+++++.|+|||..+++ .|+..++
T Consensus 34 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~ 112 (481)
T 3jz4_A 34 NGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAA 112 (481)
T ss_dssp TCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999999996 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++....+.... ..+ ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 113 ~~~~~~a~~~~~~~~~-~~~--~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~ 189 (481)
T 3jz4_A 113 SFIEWFAEEGKRIYGD-TIP--GHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSAL 189 (481)
T ss_dssp HHHHHHHHHGGGCCEE-EEC--CSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCc-ccc--ccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 9999988876654321 111 1112345678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+++++.++ +|+|+||+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 190 ~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl 269 (481)
T 3jz4_A 190 ALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADL 269 (481)
T ss_dssp HHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTTCEEEEECCCCEEEEECTTSCH
T ss_pred HHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeEEEcCCCCH
Confidence 999999999 99999999999 678899999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+| ++++++||++++.++++++++++++.+
T Consensus 270 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~ 348 (481)
T 3jz4_A 270 DKAVEGALASKF-RNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALE 348 (481)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHH
Confidence 999999999999 999999999999999999999999999999999998888 478999999999999999999999865
Q ss_pred -CCeEEeCCcc-CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 320 -SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 320 -~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
++++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++
T Consensus 349 ~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~ 428 (481)
T 3jz4_A 349 KGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRV 428 (481)
T ss_dssp TTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHH
T ss_pred CCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHH
Confidence 6799999976 34679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|++.
T Consensus 429 ~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 429 GEALEYGIVGINTGII--SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp HHHCCCSEEEESCSCC--CCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHhCCeeeEEECCCCC--CCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 9999999999998764 467899999999999999999999999999999865
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-95 Score=755.69 Aligned_cols=450 Identities=23% Similarity=0.332 Sum_probs=416.8
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.+|++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++++++|+++++.|+||+..+. .|+..++
T Consensus 15 tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~--~ev~~~~ 92 (474)
T 4h7n_A 15 TGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSITV--LEIDSFL 92 (474)
T ss_dssp TCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSHHHH--HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH--HHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999986543 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++....++......... .........++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~ 170 (474)
T 4h7n_A 93 ASIDRWCGLAPELLQTSAKNTS--IPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVA 170 (474)
T ss_dssp HHHHHHHHHHHHHHCCEEEECS--STTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHH
T ss_pred HHHHHHHhhhhhcccccccCCC--CCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHH
Confidence 9999999888887664433221 11234567789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCCCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV 242 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~ 242 (493)
.+.+++.++ +|+|++|+++|+.+.+..|+.| +++|.||||+.+|+.|++.+++++||+++|+|||||+||++|||++.
T Consensus 171 ~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~-v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dAdl~~ 249 (474)
T 4h7n_A 171 PLLMALNTVPELRDVLIFVEGGGETGANLINY-VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVLESANLEL 249 (474)
T ss_dssp HHHHHHTTCTTTTTTEEECCCCHHHHHHHHTT-CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEEECTTSCHHH
T ss_pred HHHhhhhhhcccccceeeccccchhhhhhhhc-cceEEeccccchhhhhhhhhhcccccccccCCCcCccccCchhhHHH
Confidence 999999999 9999999999998999999977 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-C
Q 011107 243 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV-S 320 (493)
Q Consensus 243 Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~-~ 320 (493)
|++.+++++| +|+||.|++++|||||++++|+|++++.++.++++.|+|. +++++||++++.+++++.++++++.+ +
T Consensus 250 aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~g 328 (474)
T 4h7n_A 250 ATSAILWGAV-VNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKG 328 (474)
T ss_dssp HHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhhc-cCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhC
Confidence 9999999999 9999999999999999999999999999999999999985 68899999999999999999999865 5
Q ss_pred CeEEeCCccC--CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 011107 321 GKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (493)
Q Consensus 321 ~~~~~gg~~~--~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 398 (493)
++++.||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 329 a~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a 408 (474)
T 4h7n_A 329 AVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVA 408 (474)
T ss_dssp CEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHH
T ss_pred ceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHH
Confidence 6888888763 46899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccceEEEcCCCcccCCCCCCccCCCCCCCC-CcchHHHHHHhhhccEEeEecCCCCCCc
Q 011107 399 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRGFIGDVPV 459 (493)
Q Consensus 399 ~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G-~~~g~~~~~~~t~~k~v~~~~~~~~~~~ 459 (493)
+++++|+|+||+++.+...+..||||+|.||+| +++|.+|+++|++.|+|+++....+.++
T Consensus 409 ~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~ 470 (474)
T 4h7n_A 409 RQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPW 470 (474)
T ss_dssp TTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCTT
T ss_pred HhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCCC
Confidence 999999999999887777789999999999998 7899999999999999999864444443
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-94 Score=756.48 Aligned_cols=441 Identities=24% Similarity=0.380 Sum_probs=412.8
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..++
T Consensus 35 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 113 (487)
T 2w8n_A 35 SGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSA 113 (487)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++.++++.. +..+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 114 ~~~~~~a~~~~~~~g-~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 190 (487)
T 2w8n_A 114 FFLEWFSEEARRVYG-DIIHT--PAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSAL 190 (487)
T ss_dssp HHHHHHHHHGGGCCC-EEECC--SCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHhcC-ccccc--CCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHH
Confidence 999999988876432 22211 112345688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEe---C-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCC
Q 011107 164 LLAKLVGEY-MDLSSIRVVE---G-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~---g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~d 237 (493)
.+++++.++ +|+|++|+|+ | +.+.++.|++|+ +|+|+||||+++|+.|++.+++++||+++|+|||||+||++|
T Consensus 191 ~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~d 270 (487)
T 2w8n_A 191 ALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDS 270 (487)
T ss_dssp HHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHTTTCEEEEEECEEEEEEECTT
T ss_pred HHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEecCCCCeEEECCC
Confidence 999999999 9999999999 8 567899999996 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHh-hcCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN-FYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~ 315 (493)
||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++ ++.|+|. +++++||++++.+++++.++++
T Consensus 271 ADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~ 349 (487)
T 2w8n_A 271 ANVDQAVAGAMASKF-RNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVN 349 (487)
T ss_dssp SCHHHHHHHHHHHHT-CCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-hCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999999999 9888884 7899999999999999999999
Q ss_pred HHHh-CCeEEeCCccCCCCc-eeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 316 DDKV-SGKIVHGGERDKNKL-RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 316 ~a~~-~~~~~~gg~~~~~g~-~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
++.+ ++++++||..+..|+ |++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++
T Consensus 350 ~a~~~Ga~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~ 429 (487)
T 2w8n_A 350 DAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQ 429 (487)
T ss_dssp HHHTTTCEEEECCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHH
T ss_pred HHHHCCCEEEeCCccCCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHH
Confidence 9865 669999997654688 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++++++++|+|+||++..+ .+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 430 a~~~~~~l~aG~v~vN~~~~~--~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 430 IWRVAEQLEVGMVGVNEGLIS--SVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp HHHHHHHSCSSEEEESCSCCC--CTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred HHHHHHhCCeeeEEEcCCCCC--CCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 999999999999999987654 46799999999999999999999999999999764
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-94 Score=756.30 Aligned_cols=442 Identities=23% Similarity=0.366 Sum_probs=395.8
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+++++++++|++||+.|+.++.++|.++|++++++|+++.++|++++++|+|||..+++. |+..++
T Consensus 37 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~ 115 (508)
T 3r64_A 37 DDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANL-EITLAG 115 (508)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCCHHHHHH-HHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999974 999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHH-
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS- 162 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~- 162 (493)
+.+++++...+.... ..+.. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 116 ~~~~~~a~~~~~~~~--~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 192 (508)
T 3r64_A 116 NITKESASFPGRVHG--RISPS-NTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGG 192 (508)
T ss_dssp HHHHHHTTSTTTCCE--EEECC-SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHT
T ss_pred HHHHHHHHHhhhhcC--ccccc-CCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHH
Confidence 999998876654322 11111 01234578899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhc--cccchhhhcCCCCeEEEcCC
Q 011107 163 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK--HLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 163 ~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~--~~~~~~~elgG~~p~iV~~d 237 (493)
.++++++.++ +|+|++|+++| +.+.+++|++|+ +|+|+||||+++|+.|++.+++ ++||+++|+|||||+||++|
T Consensus 193 ~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV~~d 272 (508)
T 3r64_A 193 VIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLAD 272 (508)
T ss_dssp HHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEEECCCCCEEEECTT
T ss_pred HHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhcccCCCceEeecCCcCceEECCC
Confidence 9999999999 99999999999 478899999995 9999999999999999999998 89999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
||+|.|++.+++++| +|+||.|++++|||||++++|+|+++|++++++++.|+|. +++++||++++++++++++++++
T Consensus 273 ADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~ 351 (508)
T 3r64_A 273 ADIDAAAQAAAVGAF-LHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIEL 351 (508)
T ss_dssp SCHHHHHHHHHHHHH-TSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-hcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999985 78999999999999999999999
Q ss_pred HHh-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 011107 317 DKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (493)
Q Consensus 317 a~~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 395 (493)
+++ ++++++||.. .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++
T Consensus 352 a~~~Ga~v~~gG~~--~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~ 429 (508)
T 3r64_A 352 AKKEGATVQVEGPI--EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAA 429 (508)
T ss_dssp HHTTTCEEEECCCE--ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHH
T ss_pred HHHcCCEEEecCCC--CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHH
Confidence 976 5699999976 6899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEecC
Q 011107 396 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF 453 (493)
Q Consensus 396 ~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~~ 453 (493)
++++++++|+|+||+++.+ ..+.+||||+|.||+|+++|++++++||+.|+|+++..
T Consensus 430 ~~~~~l~aG~V~vN~~~~~-~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~~ 486 (508)
T 3r64_A 430 QFALQIDSGMVHINDLTVN-DEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRS 486 (508)
T ss_dssp HHHTTSCSSEEEECC---------------------CCCHHHHHHHTEEEEEEEEECC
T ss_pred HHHHhCCcceEEEcCCCCC-CCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEecc
Confidence 9999999999999998754 46889999999999999999999999999999998763
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-94 Score=754.35 Aligned_cols=442 Identities=17% Similarity=0.212 Sum_probs=408.7
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||..|+.+|.++|.++|++++++|+++.++|+++++.|+|||..++. .|+..++
T Consensus 46 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 124 (500)
T 2j6l_A 46 NNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGV-GEVQEYV 124 (500)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999985 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++..++++... ..+. ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.
T Consensus 125 ~~~~~~a~~~~~~~g~-~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 201 (500)
T 2j6l_A 125 DICDYAVGLSRMIGGP-ILPS--ERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISV 201 (500)
T ss_dssp HHHHHHHHHTTTCCCB-EECC--SSTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHhcCc-cccc--cCCCceeEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHH
Confidence 9999999887665432 1111 111223567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh----h-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCC
Q 011107 164 LLAKLVGE----Y-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 164 ~l~~~l~~----a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~d 237 (493)
.+++++.+ + +|+|++|+|+|+.+.+..|++|+ +|+|+||||+.+|+.|++.+++++||+++|+|||||+||++|
T Consensus 202 ~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~d 281 (500)
T 2j6l_A 202 AVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFED 281 (500)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTT
T ss_pred HHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHhccCCCceEEEcCCCCceEECCC
Confidence 99998775 4 99999999999777899999995 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|+|. +++++||++++.+++++++++++
T Consensus 282 ADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~ 360 (500)
T 2j6l_A 282 ADLSLVVPSALFAAV-GTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEE 360 (500)
T ss_dssp CCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-hcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999888885 68999999999999999999999
Q ss_pred HHh-CCeEEeCCcc-CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 317 DKV-SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 317 a~~-~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
+.+ ++++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++
T Consensus 361 a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a 440 (500)
T 2j6l_A 361 AKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRI 440 (500)
T ss_dssp HHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHH
T ss_pred HHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence 865 6799999976 34689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH--hhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 395 QQFV--ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 395 ~~~~--~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
++++ +++++|+|+||++.. ...+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 441 ~~~~~~~~~~~G~V~vN~~~~-~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 498 (500)
T 2j6l_A 441 FRWLGPKGSDCGIVNVNIPTS-GAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTIN 498 (500)
T ss_dssp HHHHSTTSCCSSEEEESSCTT-CCCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEEEE
T ss_pred HHHHhhccCCeeEEEECCCCc-cCCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEEEe
Confidence 9999 779999999998654 2456899999999999999999999999999999864
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-94 Score=756.77 Aligned_cols=449 Identities=20% Similarity=0.309 Sum_probs=413.5
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh-hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA-SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
.++++++++.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++ .|+..+
T Consensus 41 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~ 119 (501)
T 1uxt_A 41 DLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAA 119 (501)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 5789999999999999999999999999 99999999999999999999999999999999999999999997 699999
Q ss_pred HHHHHHHHHHHHhhcCCcccccccccC--CCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchH
Q 011107 83 KTSIKSALKELKHWMTPEKAKTSITTF--PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~ 160 (493)
++.+++++..++++.. +..+...... +...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.
T Consensus 120 ~~~l~~~a~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~ 198 (501)
T 1uxt_A 120 VDRLRLAELDLKKIGG-DYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPL 198 (501)
T ss_dssp HHHHHTGGGGGGGTCC-EEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCH
T ss_pred HHHHHHHHHHHHHhcC-ccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchH
Confidence 9999999888877633 2222110011 125688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCC
Q 011107 161 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (493)
Q Consensus 161 ~~~~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~da 238 (493)
++..+++++.++ +|+|++|+|+|+.+.+..|++|+ +|+|+||||+++|+.|++.++ +||+++|+|||||+||++||
T Consensus 199 t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dA 276 (501)
T 1uxt_A 199 PAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVLEDA 276 (501)
T ss_dssp HHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHC--SSEEEEECCCCEEEEECTTS
T ss_pred HHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC--CCeEEEEcCCcCeEEECCCC
Confidence 999999999999 99999999999558899999995 999999999999999999887 89999999999999999999
Q ss_pred CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHH
Q 011107 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 239 Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
|+|.|++.+++++| +|+||.|++++|||||++++|+|+++|++++++++.|||. +++++||++++.++++++++++++
T Consensus 277 Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a 355 (501)
T 1uxt_A 277 DLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDA 355 (501)
T ss_dssp CHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh-cCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999985 789999999999999999999998
Q ss_pred Hh-CCeEEeCCccCCCC-ceeeceEecCCC---CCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 011107 318 KV-SGKIVHGGERDKNK-LRIAPTLLLDVP---RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (493)
Q Consensus 318 ~~-~~~~~~gg~~~~~g-~~~~Ptvl~~v~---~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~ 392 (493)
.+ ++++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 356 ~~~Ga~~~~gG~~--~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 433 (501)
T 1uxt_A 356 VEKGGRVLAGGRR--LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVV 433 (501)
T ss_dssp HHTTCEEEECCCB--CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHH
T ss_pred HHCCCEEEeCCcc--CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHH
Confidence 65 5699999976 57 999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEecCCCCCCccC
Q 011107 393 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRY 461 (493)
Q Consensus 393 ~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~~~~~~~~~~ 461 (493)
+++++++++++|+|+||+++ +...+.+||||+|.||+|+++|.+++++||+.|+|+++. ....+++|
T Consensus 434 ~a~~~~~~l~~G~V~iN~~~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~-~~~~~~~~ 500 (501)
T 1uxt_A 434 KIRRAVRLLEVGAIYINDMP-RHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNY-KGKGVWKY 500 (501)
T ss_dssp HHHHHHHHCCSSEEEETSCC-CCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEEC-TTSSSSSC
T ss_pred HHHHHHHhCCEeeEEEeCCC-CCCCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEEec-CCCccccc
Confidence 99999999999999999874 335688999999999999999999999999999998874 23344444
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-93 Score=750.34 Aligned_cols=442 Identities=20% Similarity=0.319 Sum_probs=390.4
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+++++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++. |+..++
T Consensus 31 t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~ 109 (485)
T 4dng_A 31 DQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTI-ELEQTI 109 (485)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999975 999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHH-
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS- 162 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~- 162 (493)
+.+++++...+... ....+.. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 110 ~~~~~~a~~~~~~~-~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~ 187 (485)
T 4dng_A 110 AILDEAMTYTGELG-GVKEVPS-DIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGG 187 (485)
T ss_dssp HHHHHHHHHGGGCS-CEECCCC-SSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHT
T ss_pred HHHHHHHHHHHHhC-Ceecccc-CCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHH
Confidence 99999998876543 2222111 01234568899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeCCh-HhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCC
Q 011107 163 SLLAKLVGEY-MDLSSIRVVEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (493)
Q Consensus 163 ~~l~~~l~~a-lP~g~v~vv~g~~-~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daD 239 (493)
.++.+++.++ +|+|+||+++|+. +.+++|++|+ +|+|+||||+.+|+.|++.+++++||+++|+|||||+||++|||
T Consensus 188 ~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dAD 267 (485)
T 4dng_A 188 TIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDAD 267 (485)
T ss_dssp HHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHHHTCEEEEEECCCEEEEECTTSC
T ss_pred HHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhhhccchhhhcCCCCceEEcCCCC
Confidence 9999999999 9999999999955 5889999996 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHH
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (493)
+|.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|+|. +++++||++++.+++++.++++++.
T Consensus 268 l~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~ 346 (485)
T 4dng_A 268 VDRAVDAAIFGKF-IHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAK 346 (485)
T ss_dssp HHHHHHHHHHHHT-TCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999885 7899999999999999999999986
Q ss_pred h-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 319 V-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 319 ~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
+ ++++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++
T Consensus 347 ~~Ga~v~~gg~~--~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~ 424 (485)
T 4dng_A 347 TDGIELAVEGKR--VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKF 424 (485)
T ss_dssp HTTCEEEECCCE--ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHH
T ss_pred HCCCEEEeCCCC--CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 5 6799999976 689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++|+|+||+++.+ ..+.+||||+|.||+|+++|++++++||+.|+|+++.
T Consensus 425 ~~~l~~G~v~vN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 478 (485)
T 4dng_A 425 ALQIDSGMTHVNDQSVN-DSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQK 478 (485)
T ss_dssp HTTSCSSEEEESCC-----------------------CHHHHHHHEEEEEEEEEC
T ss_pred HHhcCcceEEECCCCCC-CCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 99999999999997754 5688999999999999999999999999999998875
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-94 Score=748.98 Aligned_cols=437 Identities=23% Similarity=0.361 Sum_probs=409.2
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|+++++.|+|||..+++ .|+..++
T Consensus 27 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 105 (475)
T 1euh_A 27 SGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTA 105 (475)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999996 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCC----CCc-eeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCc
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFP----SSA-EIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVA 158 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~ 158 (493)
+.++++++.++++.... .+.. ..+ ... ++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+
T Consensus 106 ~~~~~~a~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~t 182 (475)
T 1euh_A 106 EIINYAAEEGLRMEGEV-LEGG--SFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQG 182 (475)
T ss_dssp HHHHHHHHHHTTCCEEE-EEGG--GTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTT
T ss_pred HHHHHHHHHHHHhcCCc-ccCC--CCCccccceeeEEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcC
Confidence 99999999888765432 1111 112 345 889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEc
Q 011107 159 PASSSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235 (493)
Q Consensus 159 ~~~~~~l~~~l~~a-lP~g~v~vv~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~ 235 (493)
|.++..+++++.++ +|+|++|+|+|+ .+.++.|++|+ +|+|+||||+++|+.|++.++ +||+++|+|||||+||+
T Consensus 183 p~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa--~~~v~lElGGk~p~iV~ 260 (475)
T 1euh_A 183 SISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVL 260 (475)
T ss_dssp HHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT--TSCEEEECCCCEEEEEC
T ss_pred hHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhcC--CCcEEEEcCCcCeEEEC
Confidence 99999999999999 999999999995 56789999996 999999999999999999877 89999999999999999
Q ss_pred CCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHH
Q 011107 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLD 315 (493)
Q Consensus 236 ~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~ 315 (493)
+|||++.|++.+++++| +|+||.|++++|||||++++|+|+++|++++++++.|+|.+++++||++++.+++++.++++
T Consensus 261 ~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~ 339 (475)
T 1euh_A 261 EDADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLIN 339 (475)
T ss_dssp TTSCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGTCSBCCCSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHh-hcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccccCccCCCCCHHHHHHHHHHHH
Confidence 99999999999999999 99999999999999999999999999999999999999966899999999999999999999
Q ss_pred HHHh-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 316 DDKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 316 ~a~~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
++.+ ++++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++
T Consensus 340 ~a~~~Ga~~~~gG~~--~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~ 417 (475)
T 1euh_A 340 DANDKGATALTEIKR--EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRA 417 (475)
T ss_dssp HHHHTTCEECSCCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHH
T ss_pred HHHHCCCEEEeCCcc--CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHH
Confidence 9865 6699999875 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcC-CCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 395 QQFVETVSAGGLVIND-TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~-~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
+++++++++|+|+||+ +..+ .+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 418 ~~~~~~l~~G~v~vN~~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 473 (475)
T 1euh_A 418 FGIAEQLEVGTVHINNKTQRG--TDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 473 (475)
T ss_dssp HHHHHHSCSSEEEESSCCCCC--STTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred HHHHHhCCEeeEEECCCCCCC--CCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence 9999999999999998 5543 57899999999999999999999999999999875
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-93 Score=747.74 Aligned_cols=434 Identities=25% Similarity=0.406 Sum_probs=387.9
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++..+.+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++..|+..++
T Consensus 32 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~ 111 (478)
T 3ty7_A 32 TEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGL 111 (478)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999556999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.++++++.+.++.... .....++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 112 ~~~~~~a~~~~~~~~~~--------~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 183 (478)
T 3ty7_A 112 NHFVAARDALDNYEFEE--------RRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAV 183 (478)
T ss_dssp HHHHHHHHHHHHCCSEE--------EETTEEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhhccc--------CCccceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHH
Confidence 99999999888765422 1235688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl 240 (493)
.+++++.++ +|+|+||+++| +.+.++.|+.|+ +|+|+||||+++|+.|++.+++++||+++|+|||||+||++|||+
T Consensus 184 ~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl 263 (478)
T 3ty7_A 184 ILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVLDDVDI 263 (478)
T ss_dssp HHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTTTCEEECCCCCCCEEEECTTSCH
T ss_pred HHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEecCCCCCcccCCCCCH
Confidence 999999999 99999999999 668899999995 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
|.|++.+++++| +|+||.|+++++||||+++||+|+++|.+++++++.|+|. +++++||+++++++++++++++++.+
T Consensus 264 ~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~ 342 (478)
T 3ty7_A 264 KEAAKATTGKVV-NNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIE 342 (478)
T ss_dssp HHHHHHHHHHHH-GGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999985 78999999999999999999999854
Q ss_pred -CCeEEeCCcc-C---CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 320 -SGKIVHGGER-D---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 320 -~~~~~~gg~~-~---~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
++++++||.. + ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++
T Consensus 343 ~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a 422 (478)
T 3ty7_A 343 EGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETL 422 (478)
T ss_dssp HTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHH
T ss_pred CCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 7799999943 2 3689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
+++++++++|+|+||+ . ...+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 423 ~~~~~~l~~G~v~vN~-~--~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~ 474 (478)
T 3ty7_A 423 HKVARSIEAGTVEINE-A--GRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474 (478)
T ss_dssp HHHHHHSCSSEEEETT-C--C----------------------CCGGGEEEEEEE
T ss_pred HHHHHhCCcCeEEECC-C--CCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEE
Confidence 9999999999999998 3 24678999999999999999999999999999986
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-93 Score=743.56 Aligned_cols=442 Identities=21% Similarity=0.293 Sum_probs=409.4
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..++
T Consensus 30 t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 108 (486)
T 1t90_A 30 TKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEAL-GEVGRGI 108 (486)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999986 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+.. ..+..... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 109 ~~~~~~a~~~~~~-~g~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 185 (486)
T 1t90_A 109 ENVEFAAGAPSLM-MGDSLASI--ATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTE 185 (486)
T ss_dssp HHHHHHTTHHHHH-CEEEEEEE--ETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHH
T ss_pred HHHHHHHHHHHHh-cCcccccC--CCCceeEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 9999988654443 22222111 12335678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+++++.++ +|+|++|+|+|+.+.+..|++|+ +|+|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++
T Consensus 186 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~ 265 (486)
T 1t90_A 186 KLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLNDANLE 265 (486)
T ss_dssp HHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCCcEEeccCCCCcEEECCCCCHH
Confidence 999999999 99999999999878899999996 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCE-EEEcCcchHHHHHHHHHHHHhhcCCCC-CCCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 242 VACRRMIMGKWGCNNGQACISPDH-IITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~-v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
.|++.+++++| .|+||.|++++| ||||++ +|+|+++|++++++++.|+| ++++++||++++.+++++.++++++.+
T Consensus 266 ~Aa~~i~~~~~-~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~ 343 (486)
T 1t90_A 266 DTVTNIVGAAF-GSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLE 343 (486)
T ss_dssp HHHHHHHHHHH-GGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHh
Confidence 99999999999 999999999999 999999 99999999999999998888 478999999999999999999999855
Q ss_pred -CCeEEeCCccC--CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHH
Q 011107 320 -SGKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396 (493)
Q Consensus 320 -~~~~~~gg~~~--~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 396 (493)
++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++
T Consensus 344 ~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~ 423 (486)
T 1t90_A 344 EGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRY 423 (486)
T ss_dssp HTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHH
T ss_pred CCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHH
Confidence 77999999742 358999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccceEEEcCCCcccCCCCCCccCCCCCCCC--CcchHHHHHHhhhccEEeEec
Q 011107 397 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 397 ~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G--~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+++++++|+|+||++. +...+.+||||+|.||+| +++|++|+++||+.|+|+++.
T Consensus 424 ~~~~l~aG~v~vN~~~-~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~ 480 (486)
T 1t90_A 424 FRENIDAGMLGINLGV-PAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARY 480 (486)
T ss_dssp HHHHCCCSEEEESCSC-CCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEEC
T ss_pred HHHhCCcCeEEECCCC-CCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 9999999999999854 334578999999999999 899999999999999998764
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-92 Score=749.22 Aligned_cols=454 Identities=19% Similarity=0.237 Sum_probs=414.3
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhc-HHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNER-EPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~-~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
+++++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|+++ +++|+++++.|+|||..+++..++..+
T Consensus 87 ~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~ 166 (563)
T 4e3x_A 87 HAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAEL 166 (563)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHH
T ss_pred CCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHH
Confidence 3789999999999999999999999999999999999999999999999998 999999999999999999975349999
Q ss_pred HHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHH
Q 011107 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~ 162 (493)
++.+++++..++++...+.... ......+.++.|+|||++|+|||||+....+++++|| +||+||+|||+.+|+++
T Consensus 167 ~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa 242 (563)
T 4e3x_A 167 IDFFRFNAKFAVELEGEQPISV---PPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLAS 242 (563)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCC---TTEEEEEECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHH
T ss_pred HHHHHHHHHHHHHhhCCCccCC---CCCcceEEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHH
Confidence 9999999999988765432221 1122345677888999999999999999999999999 69999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccc------hhhhcCCCCeEE
Q 011107 163 SLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTP------VLLELGGKSPVV 233 (493)
Q Consensus 163 ~~l~~~l~~a-lP~g~v~vv~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~------~~~elgG~~p~i 233 (493)
..+++++.++ +|+|+||+|+|+ .+.++.|++|+ |++|+||||+.+|+.|++.+++++|| +++|+|||||+|
T Consensus 243 ~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~I 322 (563)
T 4e3x_A 243 YAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHF 322 (563)
T ss_dssp HHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEEE
T ss_pred HHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCceeccCCCCCcee
Confidence 9999999999 999999999995 56789999995 99999999999999999999998885 999999999999
Q ss_pred EcCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCC-C-CCCcccccCCHHHHHHHH
Q 011107 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-L-ESKDLSRIVNSNHFARLS 311 (493)
Q Consensus 234 V~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~-~~~~~gpl~~~~~~~~~~ 311 (493)
|++|||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++.|+| . +++++||++++.+++++.
T Consensus 323 V~~dADld~Aa~~iv~~~f-~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~ 401 (563)
T 4e3x_A 323 VHSSADVDSVVSGTLRSAF-EYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIK 401 (563)
T ss_dssp ECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHH
Confidence 9999999999999999999 999999999999999999999999999999999999988 4 789999999999999999
Q ss_pred HHHHHHHh--CCeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCC--HHHHHHHH-hcCCCCcEEE
Q 011107 312 KLLDDDKV--SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDII-NSGTKPLAAY 385 (493)
Q Consensus 312 ~~i~~a~~--~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~a~ 385 (493)
++|+++++ ++++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+| +||||+++ |+++|||+++
T Consensus 402 ~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~ 481 (563)
T 4e3x_A 402 KWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGA 481 (563)
T ss_dssp HHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEE
T ss_pred HHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEE
Confidence 99999973 56999999764 3689999999999999999999999999999999997 79999999 7899999999
Q ss_pred EecCCHHHHHHHHhhcc--cceEEEcCCCcccCCCCCCccCCCCCCCC-CcchHHHHHHhhhccEEeEecCCCCCCccCC
Q 011107 386 LFTNNKKLKQQFVETVS--AGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRGFIGDVPVRYP 462 (493)
Q Consensus 386 v~t~d~~~~~~~~~~l~--~g~v~iN~~~~~~~~~~~p~gG~~~SG~G-~~~g~~~~~~~t~~k~v~~~~~~~~~~~~~~ 462 (493)
|||+|.+++++++++++ +|+|+||+.+++...+.+||||+|.||+| +++|++++++|++.|+|..+ |..+.+++|
T Consensus 482 V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~-~~~~~~~~y- 559 (563)
T 4e3x_A 482 VFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKET-HKPLGDWRY- 559 (563)
T ss_dssp EECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEE-CSCCCCSSC-
T ss_pred EEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHHHHHhCceEEEEEe-CcCCCcccC-
Confidence 99999999999999975 99999999776656788999999999998 89999999999999999876 433444454
Q ss_pred CC
Q 011107 463 PY 464 (493)
Q Consensus 463 p~ 464 (493)
||
T Consensus 560 p~ 561 (563)
T 4e3x_A 560 SY 561 (563)
T ss_dssp TT
T ss_pred CC
Confidence 44
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-90 Score=721.89 Aligned_cols=435 Identities=21% Similarity=0.292 Sum_probs=404.6
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.++++++++.++.+++++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..++
T Consensus 29 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 107 (490)
T 3ju8_A 29 GQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESA-TEVTSMV 107 (490)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+.+....... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 183 (490)
T 3ju8_A 108 NKVAISVQAFRERTGEKSGP----LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAE 183 (490)
T ss_dssp HHHHHHHHHHHHHSCCEEEE----ETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHH
T ss_pred HHHHHHHHHHHHhcCCcccc----CCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHH
Confidence 99999998887765432211 12334567799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccch-hhhcCCCCeEEEcCCCCH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPV-LLELGGKSPVVFDSGINL 240 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~-~~elgG~~p~iV~~daDl 240 (493)
++++++.++ +|+|++|+++|+.+.+++|++|+ +|+|+||||+++|+.|++.+++++||+ ++|+|||||+||++|||+
T Consensus 184 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~~lElGGk~p~iV~~dADl 263 (490)
T 3ju8_A 184 LTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMGGNNPLVVEEVADL 263 (490)
T ss_dssp HHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTSEEEEECCCCEEEEECCCSCH
T ss_pred HHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCCcEEeecCCCCeEEECCCCCH
Confidence 999999999 99999999999888999999996 999999999999999999999999998 799999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCcccCCCEEEEcCcc-hHHHHHHHHHHHHhhcCCC-C-CCCCcccccCCHHHHHHHHHHHHHH
Q 011107 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDY-APKLLESLKNELENFYGKN-P-LESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 241 ~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~~g~-~-~~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
|.|++.+++++| +|+||.|++++|+|||+++ +|+|+++|++++++++.|+ | ++++++||++++++++++.++++++
T Consensus 264 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a 342 (490)
T 3ju8_A 264 DAAVYTIIQSAF-ISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHL 342 (490)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999996 9999999999999999888 6 5789999999999999999999998
Q ss_pred Hh-CCeEEeCCcc-CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 011107 318 KV-SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (493)
Q Consensus 318 ~~-~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 395 (493)
.+ ++++++||.. +..|+|++|||+. ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++
T Consensus 343 ~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~ 421 (490)
T 3ju8_A 343 IGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFE 421 (490)
T ss_dssp HHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHH
T ss_pred HHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHH
Confidence 65 6799999865 3478999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 396 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 396 ~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++++|+|+||++..+ ..+.+||||+|.||++ ++++|++.|+|++..
T Consensus 422 ~~~~~l~aG~v~vN~~~~~-~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 422 QFLVESRAGIVNWNKQLTG-AASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp HHHHHCCSSEEEESSCSSC-CCTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred HHHHhcCcceEEECCCcCC-CCCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 9999999999999997653 4578999999999975 578999999998764
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-90 Score=765.85 Aligned_cols=444 Identities=18% Similarity=0.268 Sum_probs=416.6
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
+++++++++.++.+++++|+++|++||..|+.+|.++|.++|++++++|++++++|+++++.|+|||..++. .|+..++
T Consensus 555 ~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai 633 (1026)
T 4f9i_A 555 PSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAY-ADVTEAI 633 (1026)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHH
T ss_pred CCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHH-HHHHHHH
Confidence 378999999999999999999999999999999999999999999999999999999999999999999996 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++..++.+........ ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 634 d~lr~~a~~~~~~~~~~~~~~---~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~ 710 (1026)
T 4f9i_A 634 DFLEYYAREMIRLGQPQRVGH---APGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGW 710 (1026)
T ss_dssp HHHHHHHHHHHHHTSCEEECC---CTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHhcCCccccC---CCCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHH
Confidence 999999999988765432211 12345678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHh------ccccchhhhcCCCCeEEE
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPVVF 234 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~------~~~~~~~~elgG~~p~iV 234 (493)
.+++++.++ +|+|+||+|+| +.+.+..|++|+ |++|+||||+++|+.|++.++ +++||+++|+|||||+||
T Consensus 711 ~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV 790 (1026)
T 4f9i_A 711 HLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIII 790 (1026)
T ss_dssp HHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEE
T ss_pred HHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEE
Confidence 999999999 99999999999 557899999996 999999999999999999988 478999999999999999
Q ss_pred cCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHH
Q 011107 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKL 313 (493)
Q Consensus 235 ~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~ 313 (493)
++|||+|.|++.+++|+| .|+||.|+++++||||++++|+|+++|+++++++++|+|. +++++||++++.+++++.++
T Consensus 791 ~~dADld~Aa~~iv~saf-~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~ 869 (1026)
T 4f9i_A 791 DDDADLDEAVPHVLYSAF-GFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEY 869 (1026)
T ss_dssp CTTCCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH-hCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999999999999999985 78999999999999999999
Q ss_pred HHHHHhCCeEEeCCccCCC-CceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 011107 314 LDDDKVSGKIVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (493)
Q Consensus 314 i~~a~~~~~~~~gg~~~~~-g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~ 392 (493)
|+++++.|++++||..+.. |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 870 i~~a~~~G~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~ 949 (1026)
T 4f9i_A 870 AEIGKREGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPE 949 (1026)
T ss_dssp HHHHHHHSEEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHH
T ss_pred HHHHHhCCeEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHH
Confidence 9999776699999976554 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCC-cchHHHHHHhhhccEEeEec
Q 011107 393 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 393 ~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~-~~g~~~~~~~t~~k~v~~~~ 452 (493)
.++++++++++|+|+||+.+++...+.+||||+|.||+|+ .+|++++++|++.|+|..+.
T Consensus 950 ~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A 950 HLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp HHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEEC
T ss_pred HHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEec
Confidence 9999999999999999998776667889999999999995 68999999999999998875
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-88 Score=719.44 Aligned_cols=443 Identities=16% Similarity=0.221 Sum_probs=396.8
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHH-hhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGT-FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
.++++++++..+ +|+++++++|++| |+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+
T Consensus 31 tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~ 108 (534)
T 2y53_A 31 TGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGG 108 (534)
T ss_dssp TCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 578899999987 8999999999999 5999999999999999999999999999999999999999999997 599999
Q ss_pred HHHHHHHHHHHHhhcCCccc--cc--ccccCCC-Cceeeeecc-eEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCC
Q 011107 83 KTSIKSALKELKHWMTPEKA--KT--SITTFPS-SAEIVPEPF-GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSE 156 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~-~~~~~~~P~-GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~ 156 (493)
++.+++++...+++...... +. +....+. ..++.++|+ |||++|+|||||+.++++++++||++||+||+|||+
T Consensus 109 ~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~ 188 (534)
T 2y53_A 109 IFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPAT 188 (534)
T ss_dssp HHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCG
T ss_pred HHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 99999999887665321110 00 1111111 346789997 999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHhhh--cCCCcEEEEeCChHhHHHHHhC--CCCeEEEeCCHHHHHHHHHHHh--ccccchhhhcCCCC
Q 011107 157 VAPASSSLLAKLVGEY--MDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAA--KHLTPVLLELGGKS 230 (493)
Q Consensus 157 ~~~~~~~~l~~~l~~a--lP~g~v~vv~g~~~~~~~L~~~--~v~~v~ftGs~~~g~~i~~~a~--~~~~~~~~elgG~~ 230 (493)
.+|+++..+++++.++ +|+|+||+|+|+.. .+.++ .+|+|+||||+.+|+.|++.++ +++||+++|+||||
T Consensus 189 ~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~---~l~~~l~~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~ 265 (534)
T 2y53_A 189 ATAWLTQRMVADVVDAGILPPGALSIICGSSA---GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLN 265 (534)
T ss_dssp GGHHHHHHHHHHHHHHTCSCTTSEEECCSCCT---TSGGGCCTTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCE
T ss_pred cchHHHHHHHHHHHHhCCCCCCeEEEEeCChH---HHHhcccccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCC
Confidence 9999999999999997 59999999998532 24444 4999999999999999998775 88999999999999
Q ss_pred eEEEcCCC-----CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCH
Q 011107 231 PVVFDSGI-----NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNS 304 (493)
Q Consensus 231 p~iV~~da-----Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~ 304 (493)
|+||++|| |+|.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|||. +++++||++++
T Consensus 266 p~iV~~dA~~~~~Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~ 344 (534)
T 2y53_A 266 SAILCADATPDTPAFDLFIKEVVREMT-VKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSR 344 (534)
T ss_dssp EEEECTTCCTTSHHHHHHHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCH
T ss_pred eEEECCCccccccCHHHHHHHHHHHHH-hCCCCcccCCCEEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCH
Confidence 99999999 99999999999999 9999999999999999999999999999999999999985 68999999999
Q ss_pred HHHHHHHHHHHHHHhCCeEEeCCccC-------CCCceeeceEecCCCCC--CcccccccccceeeeEeeC---CH----
Q 011107 305 NHFARLSKLLDDDKVSGKIVHGGERD-------KNKLRIAPTLLLDVPRD--SLIMSEEIFGPLLPILTVD---KI---- 368 (493)
Q Consensus 305 ~~~~~~~~~i~~a~~~~~~~~gg~~~-------~~g~~~~Ptvl~~v~~~--~~i~~eE~fgPvl~v~~~~---~~---- 368 (493)
.++++++++|+++.+++++++||... ..|+|++|||+.+++++ |++++||+||||++|++|+ |+
T Consensus 345 ~~~~rv~~~i~~a~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~ 424 (534)
T 2y53_A 345 EQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALP 424 (534)
T ss_dssp HHHHHHHHHHHHHHTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CT
T ss_pred HHHHHHHHHHHHHHcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCC
Confidence 99999999999986678999999642 35899999999999987 6899999999999999999 99
Q ss_pred -HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc--ccceEEEcCCCcc-------cCCCCCCccCCCCCCCCCc-chHH
Q 011107 369 -EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV--SAGGLVINDTAVH-------LAVHSLPFGGVQESGMGAY-HGKF 437 (493)
Q Consensus 369 -~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l--~~g~v~iN~~~~~-------~~~~~~p~gG~~~SG~G~~-~g~~ 437 (493)
||||+++|+++|||+++|||+|.++++++++++ ++|+|+||++... ...+.+||||+|.||+|++ +|.+
T Consensus 425 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~ 504 (534)
T 2y53_A 425 EAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLR 504 (534)
T ss_dssp THHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGG
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCCCCCCCCCCCcccCCCCCCcchHH
Confidence 999999999999999999999999999999999 8999999986421 2357899999999999999 6999
Q ss_pred HHHHhhhccEEeEec
Q 011107 438 SFDVFSHKKAVLSRG 452 (493)
Q Consensus 438 ~~~~~t~~k~v~~~~ 452 (493)
++++|++.|+|...+
T Consensus 505 ~l~~~~~~k~v~~~p 519 (534)
T 2y53_A 505 ALAFYHRRSAIQAAS 519 (534)
T ss_dssp GGGGGEEEEEEEEEH
T ss_pred HHHHHhhhheeecCH
Confidence 999999999987654
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-87 Score=739.96 Aligned_cols=434 Identities=21% Similarity=0.305 Sum_probs=404.1
Q ss_pred cCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHH
Q 011107 11 NEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSAL 90 (493)
Q Consensus 11 ~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~ 90 (493)
++.++.+++++++++|++||..|+.+|.++|.++|++++++|+++.++|+++++.|+|||..++. .|+..+++.+++++
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~~a 622 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRYYA 622 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999996 69999999999999
Q ss_pred HHHHhhcCCcc-cccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHH
Q 011107 91 KELKHWMTPEK-AKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV 169 (493)
Q Consensus 91 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l 169 (493)
...+.+..... .+. ..+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++
T Consensus 623 ~~a~~~~g~~~~~~~---~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell 699 (1001)
T 3haz_A 623 AQGRKLFGSETAMPG---PTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALL 699 (1001)
T ss_dssp HHHHHHHSSCEECCC---CTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHhhcCccccccC---CCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHH
Confidence 99887654321 111 12446788999999999999999999999999999999999999999999999999999999
Q ss_pred hhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhcc---ccchhhhcCCCCeEEEcCCCCHHHHH
Q 011107 170 GEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKSPVVFDSGINLKVAC 244 (493)
Q Consensus 170 ~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~---~~~~~~elgG~~p~iV~~daDl~~Aa 244 (493)
.++ +|+|+||+|+|+.+.+..|+.|+ |++|+||||+++|+.|++.++++ +||+++|+|||||+||++|||+|.|+
T Consensus 700 ~eAGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 700 HEAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHHTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HHhCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 999 99999999999655599999996 99999999999999999998864 79999999999999999999999999
Q ss_pred HHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHhCCeE
Q 011107 245 RRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKI 323 (493)
Q Consensus 245 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~ 323 (493)
+.+++|+| +|+||.|+++++||||++++|+|+++|+++++++++|+|. +++++||++++.+++++.++|+++.++|++
T Consensus 780 ~~iv~s~f-~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g~v 858 (1001)
T 3haz_A 780 DDVVTSAF-RSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARL 858 (1001)
T ss_dssp HHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEE
T ss_pred HHHHHHHH-hCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcCeE
Confidence 99999999 9999999999999999999999999999999999999984 789999999999999999999998776788
Q ss_pred EeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc
Q 011107 324 VHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV 401 (493)
Q Consensus 324 ~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 401 (493)
+||..+..|+|+.|||+.+ ++|.+++||+||||++|++|++ +||||+++|+++|||+++|||+|.+.++++++++
T Consensus 859 -~gg~~~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l 935 (1001)
T 3haz_A 859 -HFAGPAPEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRV 935 (1001)
T ss_dssp -EEECCCCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHC
T ss_pred -eccccCCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhC
Confidence 8888766799999999974 7889999999999999999996 7999999999999999999999999999999999
Q ss_pred ccceEEEcCCCcccCCCCCCccCCCCCCCC-CcchHHHHHHhhhccEEeEec
Q 011107 402 SAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 402 ~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G-~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++|+|+||+++.+...+.+||||+|.||+| +.+|++++++|++.|+|+++.
T Consensus 936 ~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 936 QVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp CCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred CeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 999999999877666678999999999999 568999999999999998875
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-86 Score=700.91 Aligned_cols=434 Identities=17% Similarity=0.204 Sum_probs=392.3
Q ss_pred hhhhhc-ccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETKK-KNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
++++++ +++.++.+|+++++++|++||..|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+
T Consensus 49 tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~ 127 (528)
T 3v4c_A 49 PAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLN-GERGRT 127 (528)
T ss_dssp CSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 478888 999999999999999999999999999999999999999999999999999999999999999986 599999
Q ss_pred HHHHHHHHHHHHh--hcCCccc---ccccccCCCCceeeeecceEEEEEccCchhHHhhh--hHHHHHHHhCCEEEEeCC
Q 011107 83 KTSIKSALKELKH--WMTPEKA---KTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSL--DPVVGAIAAGNALVLKPS 155 (493)
Q Consensus 83 ~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~--~~~~~AL~aGN~Vvlkps 155 (493)
++.++++++.+++ +...... +......+...++.++|+|||++|+|||||+.+.+ +++++||++||+||+|||
T Consensus 128 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps 207 (528)
T 3v4c_A 128 TGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGH 207 (528)
T ss_dssp HHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECC
Confidence 9999999998887 3332211 00000112346789999999999999999999865 899999999999999999
Q ss_pred CCchHHHHHHHHHHh----hh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccc--cchhhhc
Q 011107 156 EVAPASSSLLAKLVG----EY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL--TPVLLEL 226 (493)
Q Consensus 156 ~~~~~~~~~l~~~l~----~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~--~~~~~el 226 (493)
+.+|.++..+++++. ++ +|+|+||+|+| +.+.+++|++|+ ||+|+||||+.+|+.|++.+++++ ||+++|+
T Consensus 208 ~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lEl 287 (528)
T 3v4c_A 208 SAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGEL 287 (528)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEEC
T ss_pred CCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhhccCCCceEEec
Confidence 999999999999765 45 99999999999 668899999996 999999999999999999999999 9999999
Q ss_pred CCCCeEEEcCCC---CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCc-chHHHHHHHHHHHHhhcCCCCCCCCcccccC
Q 011107 227 GGKSPVVFDSGI---NLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLESKDLSRIV 302 (493)
Q Consensus 227 gG~~p~iV~~da---Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~ 302 (493)
|||||+||++|| |++.|++.+++++| +|+||.|++++|||||++ +||+|+++|++++++++. ++.+||++
T Consensus 288 GGk~p~iV~~dAd~~dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~-----~~~~gp~~ 361 (528)
T 3v4c_A 288 GSVNPMFLLPEALKARAETLGQGWAGSLT-MGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAP-----QTMLTDGI 361 (528)
T ss_dssp CCCCCEEECHHHHHHHHHHHHHHHHHHHH-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCC-----EECSCHHH
T ss_pred CCCCeEEECCCCChhhHHHHHHHHHHHHH-hcCCCccccCcEEEEecccHHHHHHHHHHHHHHhccc-----CCCCCHHH
Confidence 999999999999 88999999999999 999999999999999997 999999999999998764 36789999
Q ss_pred CHHHHHHHHHHHHHHHhCCeEEeCCccCCCCceeeceEecCCCCC---CcccccccccceeeeEeeCCHHHHHHHHhcCC
Q 011107 303 NSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRD---SLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 379 (493)
Q Consensus 303 ~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptvl~~v~~~---~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~ 379 (493)
++.+.+++.++++ .+++++++||.. .|+|++|||+.+++++ |++++||+||||++|++|+|+||||+++|+++
T Consensus 362 ~~~~~~~v~~~~~--~~Ga~v~~gG~~--~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~ 437 (528)
T 3v4c_A 362 AKAYRDGQARFAT--RNAVKPLLATES--SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQ 437 (528)
T ss_dssp HHHHHHHHHHHHT--CTTCEEEECCCC--CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHH--hCCCEEEeCCCc--CCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCC
Confidence 9888888887764 356799999975 6899999999988887 89999999999999999999999999999999
Q ss_pred CCcEEEEecC--CHHHHHHHHhhcc--cceEEEcCCCcc-cCCCCCCccC-CCCCCCCCcc--hHHHHHHhhhccEE
Q 011107 380 KPLAAYLFTN--NKKLKQQFVETVS--AGGLVINDTAVH-LAVHSLPFGG-VQESGMGAYH--GKFSFDVFSHKKAV 448 (493)
Q Consensus 380 ~gl~a~v~t~--d~~~~~~~~~~l~--~g~v~iN~~~~~-~~~~~~p~gG-~~~SG~G~~~--g~~~~~~~t~~k~v 448 (493)
|||+++|||+ |.+++++++++++ +|+|+||+++++ ...+.+|||| +|.||+|+++ |++|+++|++.|++
T Consensus 438 ~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 438 GQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAY 514 (528)
T ss_dssp CEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEE
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHh
Confidence 9999999999 8999999999997 999999996653 2458899999 9999999986 99999999999874
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-85 Score=690.41 Aligned_cols=432 Identities=16% Similarity=0.204 Sum_probs=388.5
Q ss_pred hhhhh-cccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETK-KKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~-~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
+++++ ++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..++. .|+..+
T Consensus 16 tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~ 94 (510)
T 1ez0_A 16 TGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLT-GEIART 94 (510)
T ss_dssp TSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 57889 7999999999999999999999999999999999999999999999999999999999999998885 599999
Q ss_pred HHHHHHHHHHHHh--hcCCccccc-ccc-cCC-CCceeeeecceEEEEEccCchhHHhh--hhHHHHHHHhCCEEEEeCC
Q 011107 83 KTSIKSALKELKH--WMTPEKAKT-SIT-TFP-SSAEIVPEPFGVVLIISPWNYPFLLS--LDPVVGAIAAGNALVLKPS 155 (493)
Q Consensus 83 ~~~~~~~~~~~~~--~~~~~~~~~-~~~-~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~~~~AL~aGN~Vvlkps 155 (493)
++.++++++.+++ +........ +.. ..+ ...+++++|+|||++|+|||||+.+. .+++++||++||+||+|||
T Consensus 95 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps 174 (510)
T 1ez0_A 95 ANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGH 174 (510)
T ss_dssp HHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECC
Confidence 9999999998876 543221000 000 001 13578999999999999999999985 4999999999999999999
Q ss_pred CCchHHHHHHHHHHh----hh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccc--cchhhhc
Q 011107 156 EVAPASSSLLAKLVG----EY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL--TPVLLEL 226 (493)
Q Consensus 156 ~~~~~~~~~l~~~l~----~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~--~~~~~el 226 (493)
+.+|+++..+++++. ++ +|+|++|+|+| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++ ||+++|+
T Consensus 175 ~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~l~~~pv~lEL 254 (510)
T 1ez0_A 175 TAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGEL 254 (510)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEEC
T ss_pred CCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhccCCCccEEEEC
Confidence 999999999999985 45 89999999999 677899999996 999999999999999999999886 9999999
Q ss_pred CCCCeEEEcCCCCHH--HHHHHHHHhhcccCCCCcccCCCEEEEcCc-chHHHHHHHHHHHHhhcCCCCCCCCcccccCC
Q 011107 227 GGKSPVVFDSGINLK--VACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLESKDLSRIVN 303 (493)
Q Consensus 227 gG~~p~iV~~daDl~--~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~ 303 (493)
|||||+||++|||+| .|++.+++++| +|+||.|++++|||||++ ++|+|+++|++++++++. ||+++
T Consensus 255 GGk~p~iV~~dADl~~~~aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~---------gp~~~ 324 (510)
T 1ez0_A 255 GAINPTFIFPSAMRAKADLADQFVASMT-MGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP---------STLLT 324 (510)
T ss_dssp CCCCEEEECHHHHHHCTTHHHHHHHHHT-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC---------BCCSS
T ss_pred CCCCeEEEeCCCCccHHHHHHHHHHHHH-cCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC---------CCCCC
Confidence 999999999999999 99999999999 999999999999999999 999999999999998763 68899
Q ss_pred HHHHHHHHHHHHHHHh--CCeEEeCCccCCCCceeeceEecCCCCC---CcccccccccceeeeEeeCCHHHHHHHHhcC
Q 011107 304 SNHFARLSKLLDDDKV--SGKIVHGGERDKNKLRIAPTLLLDVPRD---SLIMSEEIFGPLLPILTVDKIEDSFDIINSG 378 (493)
Q Consensus 304 ~~~~~~~~~~i~~a~~--~~~~~~gg~~~~~g~~~~Ptvl~~v~~~---~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~ 378 (493)
+.+.+++.++++++.+ ++++++||. .|+|++|||+.+++++ |++++||+||||++|++|+|+||||+++|++
T Consensus 325 ~~~~~~~~~~v~~~~~~~Ga~~~~gg~---~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~ 401 (510)
T 1ez0_A 325 PGIRDSYQSQVVSRGSDDGIDVTFSQA---ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEML 401 (510)
T ss_dssp HHHHHHHHHHHHHHHTSTTEEEEECCC---CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEecCC---CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcC
Confidence 9999999999998863 569999987 3899999999988777 9999999999999999999999999999999
Q ss_pred CCCcEEEEecCCH--HHHHHHHhhc--ccceEEEcCCCccc-CCCCCCccC-CCCCCCCCc--chHHHHHHhhhccEEe
Q 011107 379 TKPLAAYLFTNNK--KLKQQFVETV--SAGGLVINDTAVHL-AVHSLPFGG-VQESGMGAY--HGKFSFDVFSHKKAVL 449 (493)
Q Consensus 379 ~~gl~a~v~t~d~--~~~~~~~~~l--~~g~v~iN~~~~~~-~~~~~p~gG-~~~SG~G~~--~g~~~~~~~t~~k~v~ 449 (493)
+|||++||||+|. ++++++++++ ++|+|+||++..+. ..+.+|||| +|.||.|+. +|.+|+++|++.|++.
T Consensus 402 ~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 402 AGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp CCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred CCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence 9999999999987 7999999999 79999999865432 346799999 789999854 7999999999988764
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-80 Score=641.75 Aligned_cols=405 Identities=19% Similarity=0.189 Sum_probs=325.9
Q ss_pred HHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCc----hhhhHHHHHH-HHHHHHHHHHH
Q 011107 18 AASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE----LESSIYEVAL-LKTSIKSALKE 92 (493)
Q Consensus 18 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~~ev~~-~~~~~~~~~~~ 92 (493)
.+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||. .++...|+.. +++.++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999999999998 8875569988 88999999998
Q ss_pred HHhhcCCccc-cc--ccc--cCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHH
Q 011107 93 LKHWMTPEKA-KT--SIT--TFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAK 167 (493)
Q Consensus 93 ~~~~~~~~~~-~~--~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~ 167 (493)
++.+...... .. +.. ..+...++.++|+|||++|+||| | .+.++++++||++||+||+|||+.+|.++..+++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 8887632210 00 000 01334678999999999999999 9 9999999999999999999999999999999999
Q ss_pred HHh----h----h-cCCCcEEEEeCCh-HhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcC
Q 011107 168 LVG----E----Y-MDLSSIRVVEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236 (493)
Q Consensus 168 ~l~----~----a-lP~g~v~vv~g~~-~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~ 236 (493)
++. + + +|+|++|+|+ +. +.++.|+.|+ ||+|+||||+++|+.|++.+ +||+++|+|||||+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 995 7 7 9999999999 65 6788999996 99999999999999998866 699999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcC---CCCCCCCcccccCCHHHHHHHHHH
Q 011107 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG---KNPLESKDLSRIVNSNHFARLSKL 313 (493)
Q Consensus 237 daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~---g~~~~~~~~gpl~~~~~~~~~~~~ 313 (493)
|||+|.|++.+++++| +|+| .|++++|||||+++ |+|+++|.+++++++. |+|.+ +++
T Consensus 249 dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------~~~ 309 (468)
T 1vlu_A 249 DADLIKAKRISLDAKT-NYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------KTA 309 (468)
T ss_dssp TCCHHHHHHHHHHTTC-C-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH----------------HHH
T ss_pred CCCHHHHHHHHHHHhc-CCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH----------------hcc
Confidence 9999999999999999 9999 99999999999999 9999999999999886 65421 345
Q ss_pred -HHHHHhCCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 011107 314 -LDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (493)
Q Consensus 314 -i~~a~~~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~ 392 (493)
++++. ++++||. | +.||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 310 ~i~~a~---~~~~gG~----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 378 (468)
T 1vlu_A 310 YFDKLN---ELGKLTE----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKA 378 (468)
T ss_dssp HHHHHH---HHTCCCH----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHH
T ss_pred cccccc---eeeccCC----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHH
Confidence 66554 4667775 4 789997 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccceEEEcCCCcccCCCCCCcc-----CCCCCCCCCcchHHHHHHhhhccEEeEecCCCCCCccCCCCch
Q 011107 393 LKQQFVETVSAGGLVINDTAVHLAVHSLPFG-----GVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTK 466 (493)
Q Consensus 393 ~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~g-----G~~~SG~G~~~g~~~~~~~t~~k~v~~~~~~~~~~~~~~p~~~ 466 (493)
+++++++++++|+|+||++.. ..+.+||| |+|.||+|++ |++++++|++.|+|.++.. +.+ |||+.
T Consensus 379 ~a~~~~~~l~aG~V~vN~~~~--~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~~----~~r-~py~~ 449 (468)
T 1vlu_A 379 NAEKFMKGVDSSGVYWNASTR--FADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGDG----QVA-SDYLG 449 (468)
T ss_dssp HHHHHHHHCCCSEEEESSCGG--GCC-----------------------CCSGGGEEEEEEEECSS----CCS-CCC--
T ss_pred HHHHHHHhCCeeEEEEcCCCC--CCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECCC----CcC-ccccc
Confidence 999999999999999998764 35778999 9999999999 9999999999999988652 234 88973
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-80 Score=640.99 Aligned_cols=410 Identities=20% Similarity=0.180 Sum_probs=333.4
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhc-------CCCch----
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDL-------DKPEL---- 72 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~-------Gk~~~---- 72 (493)
.++++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+ |||..
T Consensus 16 tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl~ 95 (463)
T 2h5g_A 16 ENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRLS 95 (463)
T ss_dssp -------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHHHTTC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchhhhhh
Confidence 5899999999999999999999999999999999999999999999999999999999999999 79987
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEE
Q 011107 73 ESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVL 152 (493)
Q Consensus 73 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvl 152 (493)
++. .|+..+++.+++++..++++.+.. .+......+...++.++|+|||++|+||| |...+ +++++||++||+||+
T Consensus 96 ~a~-~ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVl 171 (463)
T 2h5g_A 96 LST-SKLNSLAIGLRQIAASSQDSVGRV-LRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLL 171 (463)
T ss_dssp CCH-HHHHHHHHHHHHHHHHCTTSTTCE-EEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEE
T ss_pred hhH-HHHHHHHHHHHHHHHhhHhhcCcc-cccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEE
Confidence 454 699999999999998887765432 11110012334678999999999999777 77766 899999999999999
Q ss_pred eCCCCchHHHHHHHHHHhhhc----CCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcC
Q 011107 153 KPSEVAPASSSLLAKLVGEYM----DLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELG 227 (493)
Q Consensus 153 kps~~~~~~~~~l~~~l~~al----P~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elg 227 (493)
|||+.+|.++..+++++.+++ |+|+||+|+|+.+.+..|+.|+ ||+|+||||+.+|+.|++.++ +||+++|+|
T Consensus 172 Kps~~tp~t~~~l~~l~~~al~~~GP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv~lElG 249 (463)
T 2h5g_A 172 KGGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPVMGHSE 249 (463)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHTTTCGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSCBCSCSC
T ss_pred ECCCCcHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCEEEecC
Confidence 999999999999999999986 5999999999667789999996 999999999999999999877 899999999
Q ss_pred CCCeEEEcCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHH
Q 011107 228 GKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHF 307 (493)
Q Consensus 228 G~~p~iV~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~ 307 (493)
||||+||++|||+|.|++.+++++| .| ||.|++++|||||+++|| ||+ +
T Consensus 250 Gk~p~iV~~dADl~~Aa~~i~~~~f-~n-GQ~C~a~~rvlV~~~i~d------------------------~p~-----~ 298 (463)
T 2h5g_A 250 GICHMYVDSEASVDKVTRLVRDSKC-EY-PAACNALETLLIHRDLLR------------------------TPL-----F 298 (463)
T ss_dssp CCEEEEECTTCCTTTHHHHHHHHHH-SC-TTSTTSEEEEEEEGGGTT------------------------SHH-----H
T ss_pred CcceEEEcCCCCHHHHHHHHHHHhc-cC-CCccccCcEEEEeccccc------------------------hHH-----H
Confidence 9999999999999999999999999 98 999999999999999998 232 2
Q ss_pred HHHHHHHHHHHh-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEE
Q 011107 308 ARLSKLLDDDKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 386 (493)
Q Consensus 308 ~~~~~~i~~a~~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v 386 (493)
+ ++++++.+ +++++.|+.....++|+ +++|++++||+||||++|++|+|+||||+++|++++||+++|
T Consensus 299 ~---~~i~~~~~~Ga~v~~G~~~~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v 367 (463)
T 2h5g_A 299 D---QIIDMLRVEQVKIHAGPKFASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVI 367 (463)
T ss_dssp H---HHHHHHHHTTCEEEECHHHHC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEE
T ss_pred H---HHHHHHHhCCCEEEeCCcccccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEE
Confidence 2 34666544 56877544322234442 678999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCC--Cc--chHHHHHHhhhccEEeEecCCCCCCccCC
Q 011107 387 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AY--HGKFSFDVFSHKKAVLSRGFIGDVPVRYP 462 (493)
Q Consensus 387 ~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G--~~--~g~~~~~~~t~~k~v~~~~~~~~~~~~~~ 462 (493)
||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| ++ +|++++++||+.|+|.++.. ..+ +
T Consensus 368 ~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~~----~~r-~ 440 (463)
T 2h5g_A 368 VTEDENTAEFFLQHVDSACVFWNASTR--FSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKD----HVV-S 440 (463)
T ss_dssp ECSCHHHHHHHHHHCCSSEEEESSCGG--GCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECSS----CCG-G
T ss_pred EeCCHHHHHHHHHhCCeeEEEEeCCcc--CCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECCC----ccc-C
Confidence 999999999999999999999998764 3578999999999999 65 89999999999999988753 233 6
Q ss_pred CCchhH
Q 011107 463 PYTKGK 468 (493)
Q Consensus 463 p~~~~~ 468 (493)
||+..+
T Consensus 441 ~y~~~~ 446 (463)
T 2h5g_A 441 DFSEHG 446 (463)
T ss_dssp GGSTTS
T ss_pred Cccccc
Confidence 777543
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-79 Score=634.78 Aligned_cols=416 Identities=13% Similarity=0.175 Sum_probs=362.2
Q ss_pred hcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHH
Q 011107 8 KKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIK 87 (493)
Q Consensus 8 ~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~ 87 (493)
+.+++.++.+++++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..+++..+...+++.+
T Consensus 3 ~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~- 81 (464)
T 3k9d_A 3 LEDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHV- 81 (464)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHH-
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHH-
Confidence 3556777899999999999999999999999999999999999999999999999999999999887644443333333
Q ss_pred HHHHHHHhhcCCcccccc-cccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHH
Q 011107 88 SALKELKHWMTPEKAKTS-ITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLA 166 (493)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~ 166 (493)
..+......... ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++
T Consensus 82 ------~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~ 155 (464)
T 3k9d_A 82 ------YNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETV 155 (464)
T ss_dssp ------HHHHTTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHH
T ss_pred ------HHhhhcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHH
Confidence 222222111111 1123456788999999999999999999999999999999999999999999999999866
Q ss_pred HH----Hhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcC-CCCeEEEcCCC
Q 011107 167 KL----VGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELG-GKSPVVFDSGI 238 (493)
Q Consensus 167 ~~----l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elg-G~~p~iV~~da 238 (493)
++ +.++ +|+|+||+|+| +.+.+..|++|+ ||+|+||||+. +++.+++++||+ +|+| ||+|+||++||
T Consensus 156 ~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~----v~~~a~~~~kpv-lelG~G~~p~iV~~dA 230 (464)
T 3k9d_A 156 RIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSA----MVKAAYSSGTPA-IGVGPGNGPAFIERSA 230 (464)
T ss_dssp HHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHH----HHHHHTTSSSCE-EEBCCCCCEEEECTTS
T ss_pred HHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChH----HHHHHHhcCCcE-EeeCCCCCeEEECCCC
Confidence 54 5677 99999999999 678899999996 99999999997 456677889999 7888 99999999999
Q ss_pred CHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHH-------hhcCCCC--CCCCcccccCCHHHHHH
Q 011107 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE-------NFYGKNP--LESKDLSRIVNSNHFAR 309 (493)
Q Consensus 239 Dl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~-------~~~~g~~--~~~~~~gpl~~~~~~~~ 309 (493)
|++.|++.+++|+| +|+||.|+++++||||+++||+|+++|+++.. .++.|+| ++++++||+++.+++++
T Consensus 231 Dl~~Aa~~i~~~~~-~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~ 309 (464)
T 3k9d_A 231 NIPRAVKHILDSKT-FDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQH 309 (464)
T ss_dssp CHHHHHHHHHHHHT-GGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHH
T ss_pred CHHHHHHHHHHHHh-cCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHH
Confidence 99999999999999 99999999999999999999999999999863 4455665 35789999999999999
Q ss_pred HHHHHHHHHh-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHH----HHHhcCCCCcEE
Q 011107 310 LSKLLDDDKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF----DIINSGTKPLAA 384 (493)
Q Consensus 310 ~~~~i~~a~~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai----~~~n~~~~gl~a 384 (493)
+.++++.+.. ++++++||.. ++++++++. +|+||||++|++|+|+|||| +++|+++|||++
T Consensus 310 i~~~~~~a~~~ga~vl~gg~~-------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a 375 (464)
T 3k9d_A 310 IANLAGLTVPADARVLIAEET-------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTL 375 (464)
T ss_dssp HHHHTTCCCCTTCCEEEEECC-------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEE
T ss_pred HHHHhhhhhcCCCEEEEcCCC-------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeE
Confidence 9999988754 6799998753 567888865 89999999999999999997 799999999999
Q ss_pred EEecCCHHHHHHHHhhcccceEEEcCCCcc-------cCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 385 YLFTNNKKLKQQFVETVSAGGLVINDTAVH-------LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 385 ~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-------~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
+|||+|.+++++|++++++|+|+||+++.+ ...+.+|||| +.+|.|.++|..++++|++.|+|...
T Consensus 376 ~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 376 IIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp EEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred EEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 999999999999999999999999997753 2568899998 78999999999999999999999764
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-76 Score=609.39 Aligned_cols=390 Identities=18% Similarity=0.204 Sum_probs=324.2
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCc----hhhhHH-------HHHHHHH
Q 011107 16 AEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE----LESSIY-------EVALLKT 84 (493)
Q Consensus 16 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~~-------ev~~~~~ 84 (493)
.+++++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++++|+||+. .+++.. |+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999985 355432 6777777
Q ss_pred HHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHH
Q 011107 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (493)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~ 164 (493)
.+++++...+.. .+..+......+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..
T Consensus 105 ~l~~~a~~~~~~--g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 180 (444)
T 4ghk_A 105 GLRQVATLPDPI--GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTA 180 (444)
T ss_dssp HHHHHHHSCCCT--TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHhhcccc--CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 777766543211 11111100112345688999999999999998 8 6889999999999999999999999999999
Q ss_pred HHHHH----hhh-cCCCcEEEEeC-ChH-hHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcC
Q 011107 165 LAKLV----GEY-MDLSSIRVVEG-AVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236 (493)
Q Consensus 165 l~~~l----~~a-lP~g~v~vv~g-~~~-~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~ 236 (493)
+++++ .++ +|+|+||+|+| +.+ .+..|..|+ ||.|+||||+.+|+.+++.+ +||+++|+|||||+||++
T Consensus 181 l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~ 257 (444)
T 4ghk_A 181 LAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDD 257 (444)
T ss_dssp HHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECC
Confidence 99997 566 99999999998 554 567777785 99999999999999998765 699999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcC---CCCCCCCcccccCCHHHHHHHHHH
Q 011107 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG---KNPLESKDLSRIVNSNHFARLSKL 313 (493)
Q Consensus 237 daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~---g~~~~~~~~gpl~~~~~~~~~~~~ 313 (493)
|||+|.|++.+++++| +|+| .|++++|||||+++||+|+++|++++++++. |+| ...++
T Consensus 258 dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p----------------~~~~~ 319 (444)
T 4ghk_A 258 RASVTKALTVCDNAKT-HRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDA----------------DARAV 319 (444)
T ss_dssp TCCHHHHHHHCC-----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECH----------------HHHHH
T ss_pred CCCHHHHHHHHHHHhc-CCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCH----------------HHHHH
Confidence 9999999999999999 9999 9999999999999999999999999998876 543 12456
Q ss_pred HHHHHhCCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 314 LDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 314 i~~a~~~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
++++.. | ++ ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 320 i~~a~~-------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 378 (444)
T 4ghk_A 320 LEAAGV-------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDR 378 (444)
T ss_dssp HHHTTC-------------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHH
T ss_pred HHhccc-------------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHH
Confidence 665421 1 12 35689999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCC----CcchHHHHHHhhhccEEeEecC
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG----AYHGKFSFDVFSHKKAVLSRGF 453 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G----~~~g~~~~~~~t~~k~v~~~~~ 453 (493)
++++++++++|+|+||+++. ..+..||||.+.||+| +++|++|+++||+.|+|+++..
T Consensus 379 a~~~a~~l~aG~V~vN~~~~--~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~~ 440 (444)
T 4ghk_A 379 AMRFLREVDSASVMVNASTR--FADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGHG 440 (444)
T ss_dssp HHHHHHHCCSSEEEEEECGG--GCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEEE
T ss_pred HHHHHHhCCcceEEEcCCCc--cCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECCC
Confidence 99999999999999999765 3578999999999998 6789999999999999988753
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-76 Score=607.05 Aligned_cols=387 Identities=18% Similarity=0.237 Sum_probs=333.8
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCc----hhhhH-------HHHHHHHH
Q 011107 16 AEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE----LESSI-------YEVALLKT 84 (493)
Q Consensus 16 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~-------~ev~~~~~ 84 (493)
.+++++++++|++||+.|+.+|.++|.++|++++++|+++.++|+++++.|+||+. .++.. .|+..+++
T Consensus 13 ~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~ 92 (427)
T 1o20_A 13 MDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIK 92 (427)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHH
Confidence 45899999999999999999999999999999999999999999999999999985 55532 48888888
Q ss_pred HHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHH
Q 011107 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (493)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~ 164 (493)
.+++++...+. .. ...+......+...+++++|+|||++|+||| +.++++++++||++||+||+|||+.+|+++..
T Consensus 93 ~l~~~a~~~~~-~g-~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~ 168 (427)
T 1o20_A 93 ACETVIGLKDP-VG-EVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKA 168 (427)
T ss_dssp HHHHHHHSCCC-TT-CEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHH
T ss_pred HHHHHHhcccc-cC-ccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHH
Confidence 88887764432 11 1111000011334578899999999999986 47899999999999999999999999999999
Q ss_pred HHHHHh----hh-cCCCcEEEEeC-ChH-hHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcC
Q 011107 165 LAKLVG----EY-MDLSSIRVVEG-AVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236 (493)
Q Consensus 165 l~~~l~----~a-lP~g~v~vv~g-~~~-~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~ 236 (493)
+++++. ++ +|+|++|+|+| +.+ .++.|..|+ +|+|+||||+++|+.|++.+ .||+++|+|||||+||++
T Consensus 169 l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~ 245 (427)
T 1o20_A 169 IVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDE 245 (427)
T ss_dssp HHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeC
Confidence 999998 55 89999999998 544 567777785 99999999999999999877 599999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 011107 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDD 316 (493)
Q Consensus 237 daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~ 316 (493)
|||+|.|++.+++++| .|+| .|++++|||||+++||+|+++|++++++++.+
T Consensus 246 dADl~~Aa~~i~~~~f-~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~-------------------------- 297 (427)
T 1o20_A 246 SADLKKAVPVIINAKT-QRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE-------------------------- 297 (427)
T ss_dssp TSCHHHHHHHHHHHHH-SCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE--------------------------
T ss_pred CCCHHHHHHHHHHHhc-cCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe--------------------------
Confidence 9999999999999999 9999 99999999999999999999999999876531
Q ss_pred HHhCCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHH
Q 011107 317 DKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396 (493)
Q Consensus 317 a~~~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 396 (493)
+.||... .+ |+ ||| ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus 298 -------~~gg~~~-~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~ 364 (427)
T 1o20_A 298 -------VRGCEKT-RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKK 364 (427)
T ss_dssp -------EEECHHH-HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHH
T ss_pred -------eecChhh-hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHH
Confidence 1233221 12 33 885 35678999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccceEEEcCCCcccCCCCCCccCCCCCCCC----CcchHHHHHHhhhccEEeEec
Q 011107 397 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG----AYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 397 ~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G----~~~g~~~~~~~t~~k~v~~~~ 452 (493)
+++++++|+|+||++.. ..+.+||||.|.||+| +++|++++++|++.|+|.+++
T Consensus 365 ~~~~l~~G~V~iN~~~~--~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 365 FVSEIDAAAVYVNASTR--FTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HHHHCCSSEEEESSCGG--GCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHhCCccEEEECCCCc--cCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 99999999999998664 4578999999999997 467999999999999998865
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-75 Score=606.52 Aligned_cols=375 Identities=18% Similarity=0.197 Sum_probs=323.0
Q ss_pred cCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHH
Q 011107 11 NEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSAL 90 (493)
Q Consensus 11 ~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~ 90 (493)
++..+.+++++++++|++||+.|+.+|.++|.++|+++++++++++++|++++++|+|||..+++..|+..+.+.+.
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~--- 77 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIY--- 77 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH---
Confidence 46788999999999999999999999999999999999999999999999999999999999987546555555442
Q ss_pred HHHHhhcCCccccccc-ccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHH
Q 011107 91 KELKHWMTPEKAKTSI-TTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV 169 (493)
Q Consensus 91 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l 169 (493)
+++......... ...+...+..++|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++..+++++
T Consensus 78 ----~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~ 153 (452)
T 3my7_A 78 ----NKYKDEQTCGILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLV 153 (452)
T ss_dssp ----HHHTTCCCSEEC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH
T ss_pred ----HHhhhccccccccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHH
Confidence 122211111111 112345688999999999999999999999999999999999999999999999999988887
Q ss_pred h----hh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHH
Q 011107 170 G----EY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV 242 (493)
Q Consensus 170 ~----~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~ 242 (493)
. ++ +|+|+||+++| +.+.+++|++|+ |+.|+||||+.++ +.+++++||+++|+|||+|+||++|||++.
T Consensus 154 ~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~----~~a~~~~kp~~~e~gG~~p~iV~~dADl~~ 229 (452)
T 3my7_A 154 LDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMV----KAAYSSGKPAIGVGAGNVPVVIDETADIKR 229 (452)
T ss_dssp HHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHH----HHHHTSSSCEEECC--CEEEEECTTSCHHH
T ss_pred HHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHH----HHHHhcCCCEEecCCCCCeEEEeCCCCHHH
Confidence 6 56 99999999999 678899999995 9999999999854 456778999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHh-CC
Q 011107 243 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV-SG 321 (493)
Q Consensus 243 Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~~ 321 (493)
|++.+++|+| +|+||.|+++++||||+++||+|+++|+++ .||++++++++++.++++++.. ++
T Consensus 230 Aa~~iv~s~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~--------------~gpli~~~~~~~v~~~i~~~~~~~a 294 (452)
T 3my7_A 230 AVASVLMSKT-FDNGVVCASEQAVIVVDEVYDEVKERFASH--------------KAHVLSKTDADKVRKVLLIDGALNA 294 (452)
T ss_dssp HHHHHHHGGG-GGGGCCTTCEEEEEEEGGGHHHHHHHHHTT--------------TEEECCHHHHHHHHHHHEETTEECG
T ss_pred HHHHHHHHHh-CCCCCccCCCcEEEEcHHHHHHHHHHHHHh--------------CCCcCCHHHHHHHHHHHHhhcccCC
Confidence 9999999999 999999999999999999999999999874 3899999999999999986543 34
Q ss_pred eEEeCCccC----CCCceeeceE-------ecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCC----CCcEEEE
Q 011107 322 KIVHGGERD----KNKLRIAPTL-------LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT----KPLAAYL 386 (493)
Q Consensus 322 ~~~~gg~~~----~~g~~~~Ptv-------l~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~----~gl~a~v 386 (493)
++ +||... ..|+|++||+ ++++++++++.+ |+||||++|++|+|+||||+++|++. |||+++|
T Consensus 295 ~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i 372 (452)
T 3my7_A 295 KI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGL 372 (452)
T ss_dssp GG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred eE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEE
Confidence 54 576542 2589999998 788999999876 89999999999999999999999985 9999999
Q ss_pred ecCCHHHHHH---HHhhcccceEEEcCCCc
Q 011107 387 FTNNKKLKQQ---FVETVSAGGLVINDTAV 413 (493)
Q Consensus 387 ~t~d~~~~~~---~~~~l~~g~v~iN~~~~ 413 (493)
||+|.+.+++ +++++++|+|+||+++.
T Consensus 373 ~t~d~~~a~~i~~~a~~l~~G~V~VN~~~~ 402 (452)
T 3my7_A 373 YTNQDVNADRIRYFGDKMKTARILINIPTT 402 (452)
T ss_dssp ESCTTTCHHHHHHHHHHCCCSEEEESCCCC
T ss_pred EcCCHHHHHHHHHHHHhCCEEEEEECCCCC
Confidence 9999777777 99999999999998653
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.092 Score=52.05 Aligned_cols=336 Identities=17% Similarity=0.184 Sum_probs=173.8
Q ss_pred hhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCC-C------chhhhHHHHHHH--------HHHHHHHHHHHHh
Q 011107 31 ASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDK-P------ELESSIYEVALL--------KTSIKSALKELKH 95 (493)
Q Consensus 31 ~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk-~------~~~a~~~ev~~~--------~~~~~~~~~~~~~ 95 (493)
..++..+..+-.+..+.+.+-++++.|+-....++..-+ . +.-. ..|+..+ .+.++.+.++++.
T Consensus 25 l~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs-~~ei~~A~~~l~~~~~~ai~~A~~~I~~ 103 (423)
T 4gic_A 25 LAWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELP-RDVLEAAWQALPAEQAKALREAAERIRA 103 (423)
T ss_dssp HCCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEEC-HHHHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred hcccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecC-HHHHHHHHhhCCHHHHHHHHHHHHHHHH
Confidence 345555555566666666666666655544433333211 1 1111 1233322 2345555566665
Q ss_pred hcCCcccccc-cc-cCCCCceeeeecceEEEEEccCc---hhHHhhhhHHHHHHHhCCE--EEEeCCCCchHHHHHHHHH
Q 011107 96 WMTPEKAKTS-IT-TFPSSAEIVPEPFGVVLIISPWN---YPFLLSLDPVVGAIAAGNA--LVLKPSEVAPASSSLLAKL 168 (493)
Q Consensus 96 ~~~~~~~~~~-~~-~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~~~~AL~aGN~--Vvlkps~~~~~~~~~l~~~ 168 (493)
+...+..... .. ..+.....++.|+--|++..|.- ||-. .+...+||-.+|.. |+.-|.+........|+.+
T Consensus 104 fh~~Q~~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSs-vLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~AA 182 (423)
T 4gic_A 104 YAERQKLDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSS-VLMNAVPAKVAGVPELIMAVPAPRGELNALVLAAA 182 (423)
T ss_dssp HHHHHCCCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHH-HHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHHHH
T ss_pred HHHhcccCCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhH-HHHhhccHHHhCCCeEEEecCCCCCCccHHHHHHH
Confidence 5443332211 11 22344567899999999999944 6644 45567899999986 4444543221112222211
Q ss_pred HhhhcCCCcEEEEe-CChHhHHHHH---hC--CCCeEEEeCCHHHHHHHHHHHhccccchhhh-cCCCCe--EEEcCCCC
Q 011107 169 VGEYMDLSSIRVVE-GAVAETSALL---DQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLE-LGGKSP--VVFDSGIN 239 (493)
Q Consensus 169 l~~alP~g~v~vv~-g~~~~~~~L~---~~--~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~e-lgG~~p--~iV~~daD 239 (493)
+.+ |+=.+.. |+.....+|. .. +||+|+=.|+.-+...=. ... ..|-.. ..|.+= +|-+++||
T Consensus 183 -~l~---Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr-~v~---g~VgIDm~AGPSEilViAD~~a~ 254 (423)
T 4gic_A 183 -YIS---GVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKK-LVF---GQVGIDMVAGPSEILVISDGRTD 254 (423)
T ss_dssp -HHH---TCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHH-HHB---TTBEECCCCCCCEEEEEECSCSC
T ss_pred -Hhc---CCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHH-Hhc---CCcCcccccccceEEEEeCCCCC
Confidence 111 3223333 3444445554 22 499999888775432211 111 112111 134443 34455689
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHh
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV 319 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (493)
.+..+.+++.-+= ++. ..+.++|..+ ++|.+++.+++.+.... +-.. +.+..-+++
T Consensus 255 p~~vAaDLlsQAE-Hd~-----~a~~iLvT~s--~~la~~V~~~i~~~l~~----------l~r~---~i~~~sl~~--- 310 (423)
T 4gic_A 255 PDWIAMDLFSQAE-HDE-----DAQAILISPD--AAHLEAVQASIERLLPG----------MERA---EVIRTSLER--- 310 (423)
T ss_dssp HHHHHHHHHHHHT-TCT-----TCEEEEEESC--HHHHHHHHHHHHHHGGG----------CTTH---HHHHHHHHH---
T ss_pred HHHHHHHHHHhhc-cCC-----CCeEEEEeCc--HHHHHHHHHHHHHHHhh----------CccH---HHHHHHHhc---
Confidence 9999988887754 322 2334666665 56666666666543211 1111 111122210
Q ss_pred CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHh
Q 011107 320 SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 399 (493)
Q Consensus 320 ~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 399 (493)
+| .++.++|++|+++++|..-. -..-|.++|.+ .++.
T Consensus 311 ------------------------------------~g---~ii~v~~~~ea~~~~N~~AP-EHLel~~~~~~---~~l~ 347 (423)
T 4gic_A 311 ------------------------------------RG---GMILVDDLEQAAAVANRIAP-EHLELSVESPE---VLVE 347 (423)
T ss_dssp ------------------------------------HC---EEEECSSHHHHHHHHHHHCC-SEEEEESSCHH---HHGG
T ss_pred ------------------------------------Cc---eEEEEeehHHHHHHHHhhCh-HHhhhhhCCHH---HHHh
Confidence 01 13457999999999998422 35678899876 4666
Q ss_pred hc-ccceEEEcCCCccc-------CCCCCCccCCCCCCCCCcchHHHHHHhhhccEE
Q 011107 400 TV-SAGGLVINDTAVHL-------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 448 (493)
Q Consensus 400 ~l-~~g~v~iN~~~~~~-------~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v 448 (493)
++ .+|.|++..++.-. .++.+|- +|+.|+.+..+...|..+-++
T Consensus 348 ~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT-----~G~Ar~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 348 SIRNAGAIFMGRYTAEALGDYCAGPNHVLPT-----SGTARFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp GCCCCSEEEEC----------------CCCC-----TTGGGTCCCCCGGGGEEEEEE
T ss_pred hCcEeceeecCCCCchhhhhcCcCCCccCCC-----CCcccccCCCCHHHeeeeeeE
Confidence 66 48999998644311 2233344 455666666777888876654
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=96.48 E-value=0.79 Score=45.52 Aligned_cols=328 Identities=18% Similarity=0.200 Sum_probs=177.0
Q ss_pred HHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCC----chhhhHHHHHHH--------HHHHHHHHHHHHhhcCCccccc-c
Q 011107 39 GWRVSQLKSLMKMLNEREPDIVDALRQDLDKP----ELESSIYEVALL--------KTSIKSALKELKHWMTPEKAKT-S 105 (493)
Q Consensus 39 ~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~----~~~a~~~ev~~~--------~~~~~~~~~~~~~~~~~~~~~~-~ 105 (493)
.+-.+..+.+.+-++++.|+=....++...+- +.-. ..|+..+ .+-++.+.++++.+...+.... .
T Consensus 30 ~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs-~~ei~~A~~~~~~~~~~ai~~A~~nI~~fH~~Q~~~~~~ 108 (434)
T 1kae_A 30 ESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVS-AEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVD 108 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSSCCCCSBCC-HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCccccccC-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 34445566666666666665554444443221 1111 1244333 3455566667777665443321 1
Q ss_pred c-ccCCCCceeeeecceEEEEEccC---chhHHhhhhHHHHHHHhCCEEE--EeCCCCchHHHHHHHHHHhhhcCCCcEE
Q 011107 106 I-TTFPSSAEIVPEPFGVVLIISPW---NYPFLLSLDPVVGAIAAGNALV--LKPSEVAPASSSLLAKLVGEYMDLSSIR 179 (493)
Q Consensus 106 ~-~~~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~~~~AL~aGN~Vv--lkps~~~~~~~~~l~~~l~~alP~g~v~ 179 (493)
. ...+.....++.|+--|++..|. -||- +.+...+||-.+|+.=| +-|..-.|.+ |+.+ +. .|+=.
T Consensus 109 ~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~ypS-svLM~aiPAkVAGV~~Iv~~tPp~i~p~i---L~AA-~l---~Gv~e 180 (434)
T 1kae_A 109 VETQPGVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPPIADEI---LYAA-QL---CGVQD 180 (434)
T ss_dssp EEEETTEEEEEEEEECSEEEEECCCSSSCCTH-HHHHHHHHHHHHTCSEEEEEECSSCCHHH---HHHH-HH---TTCCE
T ss_pred EEecCCcEEEEEEeehheEEEEecCCCCCchh-HHHHhhccHhhcCCCeEEEECCCCCCHHH---HHHH-HH---cCCCE
Confidence 1 11233456788999999999996 4654 45556789999998654 4444223322 2111 11 13223
Q ss_pred EEe-CChHhHHHHH---hC--CCCeEEEeCCHHHHHHHHHHHhccccchhhh-cCCCCe--EEEcCCCCHHHHHHHHHHh
Q 011107 180 VVE-GAVAETSALL---DQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLE-LGGKSP--VVFDSGINLKVACRRMIMG 250 (493)
Q Consensus 180 vv~-g~~~~~~~L~---~~--~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~e-lgG~~p--~iV~~daDl~~Aa~~i~~~ 250 (493)
+.. |+.....+|. +. +||+|+=.|+.-+...=..-.... ..|-.. ..|.+= +|-+++||.+..+.+++.-
T Consensus 181 Iy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~-G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQ 259 (434)
T 1kae_A 181 VFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRL-DGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQ 259 (434)
T ss_dssp EEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCT-TSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHH
T ss_pred EeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhc-CccccCCCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 333 3444445554 22 399998888765432110000001 112111 134443 3445578999999888877
Q ss_pred hcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCeEEeCCccC
Q 011107 251 KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD 330 (493)
Q Consensus 251 ~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~ 330 (493)
+= ++. ..+.++|..+ ++|.+++.+++.+.... +-. . +.++.+.
T Consensus 260 AE-Hd~-----~a~aiLvT~s--~~la~~V~~ev~~ql~~----------lpr---~----~ia~~sl------------ 302 (434)
T 1kae_A 260 AE-HGP-----DSQVILLTPA--ADMARRVAEAVERQLAE----------LPR---A----ETARQAL------------ 302 (434)
T ss_dssp HT-TCT-----TCEEEEEESC--HHHHHHHHHHHHHHHTT----------CTT---H----HHHHHHH------------
T ss_pred hc-cCC-----CCcEEEEECC--HHHHHHHHHHHHHHHHh----------CCh---H----HHHHHHH------------
Confidence 54 322 2344566555 55666666655543211 001 1 1111110
Q ss_pred CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc-ccceEEEc
Q 011107 331 KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV-SAGGLVIN 409 (493)
Q Consensus 331 ~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~v~iN 409 (493)
..- .++.++|++|+++++|..-. -..-|.++|+. .++.++ .+|.|++.
T Consensus 303 --------------------------~~~-~ii~v~~l~ea~~~~N~~AP-EHLel~~~dp~---~~l~~I~nAGaIFlG 351 (434)
T 1kae_A 303 --------------------------NAS-RLIVTKDLAQCVEISNQYGP-EHLIIQTRNAR---ELVDSITSAGSVFLG 351 (434)
T ss_dssp --------------------------TTC-EEEECSSHHHHHHHHHHHCC-SEEEEESTTHH---HHGGGCCSCSEEEES
T ss_pred --------------------------HcC-eEEEECCHHHHHHHHHHhhh-HhhhhhhcCHH---HHHhhcCcccchhcC
Confidence 011 35577999999999998432 35678899986 456666 58999999
Q ss_pred CCCcc-------cCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 410 DTAVH-------LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 410 ~~~~~-------~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
.++.- ..++-+|-+ |+.|+.+..+...|.+.-++.
T Consensus 352 ~~tpe~~GDY~aG~NHvLPT~-----G~AR~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 352 DWSPESAGDYASGTNHVLPTY-----GYTATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp TTCCHHHHHHTSSSCCCCCCT-----TGGGTCCCSCGGGGEEEEEEE
T ss_pred CCCchhhcccccCCCcccCCC-----CceeccCCCcHHhccceeeEE
Confidence 74431 144556665 455666666778888776653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 493 | ||||
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-96 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 7e-89 | |
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 6e-87 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 3e-84 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 2e-73 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 6e-61 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-60 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 1e-49 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 4e-25 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-16 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 1e-13 |
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 297 bits (760), Expect = 1e-96
Identities = 206/445 (46%), Positives = 288/445 (64%), Gaps = 7/445 (1%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
VK R F SGKT+S +R+ QL++L +M+NE I AL DL K E S EVA +
Sbjct: 6 VKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHV 65
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
+ + +KEL W E + T I EP GVVL+I WNYPF L++ P+VG
Sbjct: 66 LEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVG 125
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
A+AAGNA++LKPSEV+ + LLA L+ +YMD + VV+G V ET+ LL +++D I YT
Sbjct: 126 AVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDHIMYT 185
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
G++ V +IVMAAAAKHLTPV LELGGKSP D +L VACRR+ GK+ N+GQ C++
Sbjct: 186 GSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQTCVA 244
Query: 263 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+I+ +++E LK L++FYG++ +S+D RI+N HF R+ L+D+ KV
Sbjct: 245 PDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKV--- 301
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
HGG D++ IAPT+L+DV S +M EEIFGP++PI+ V +E++ IN KPL
Sbjct: 302 -AHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPL 360
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 442
A Y+F+NN+K+ ++ + S+GG+ ND VH+ V +LPFGGV SGMGAYHGK SF+ F
Sbjct: 361 ALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETF 420
Query: 443 SHKKAVLSRGFIGDVP--VRYPPYT 465
SH+++ L + + + RYPP
Sbjct: 421 SHRRSCLVKSLLNEEAHKARYPPSP 445
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 278 bits (713), Expect = 7e-89
Identities = 105/443 (23%), Positives = 180/443 (40%), Gaps = 12/443 (2%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
D + A + + + R L L ++ + D KP + S
Sbjct: 52 DVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVIS 111
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFL 134
+ ++ + + L+ W KT + EP GV I PWN+P L
Sbjct: 112 YLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLL 167
Query: 135 LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL- 192
+ + A+A GN +V+K +E P ++ +A L+ E + +V G A +
Sbjct: 168 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 227
Query: 193 -DQKWDKICYTGNSRVARIVM-AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMG 250
+ DK+ +TG++ + R++ AA + +L V LELGGKSP + S ++ A +
Sbjct: 228 SHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 287
Query: 251 KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARL 310
+ +C + Y + S+ G + V+ F ++
Sbjct: 288 LFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKI 347
Query: 311 SKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 368
++ K G K++ GG ++ I PT+ DV I EEIFGP++ IL I
Sbjct: 348 LGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 407
Query: 369 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQES 428
E+ N+ T LAA +FT + + + AG + +N V A PFGG + S
Sbjct: 408 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMS 465
Query: 429 GMGAYHGKFSFDVFSHKKAVLSR 451
G G G++ ++ K V +
Sbjct: 466 GSGRELGEYGLQAYTEVKTVTVK 488
|
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 273 bits (699), Expect = 6e-87
Identities = 102/444 (22%), Positives = 184/444 (41%), Gaps = 14/444 (3%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
D + A ++ + +T R L L ++ + + K +
Sbjct: 52 DVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNA 111
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFL 134
+ ++ +++ W + +T EP GV I PWN+P L
Sbjct: 112 YLMDLGGCIKTLRYC----AGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLL 167
Query: 135 LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL- 192
+ L + A++ GN +V+KP+E P ++ + L+ E + +V G A +
Sbjct: 168 MFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAIS 227
Query: 193 -DQKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSGINLKVACRRMIMG 250
DK+ +TG++ V +++ AA K +L V LELGGKSP + + +L A G
Sbjct: 228 SHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQG 287
Query: 251 KWGCNNGQACISPDHIITTKDYAPKLLE-SLKNELENFYGKNPLESKDLSRIVNSNHFAR 309
+ + GQ CI+ + + + + S++ + G ++ + +
Sbjct: 288 VFY-HQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEK 346
Query: 310 LSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK 367
+ L++ K G K+ GG NK I PT+ DV D I EEIFGP+ I+
Sbjct: 347 ILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKS 406
Query: 368 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQE 427
++D N+ L+A +FTN+ + +G + +N + PFGG +
Sbjct: 407 LDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCY--SVVSAQCPFGGFKM 464
Query: 428 SGMGAYHGKFSFDVFSHKKAVLSR 451
SG G G++ F ++ K V +
Sbjct: 465 SGNGRELGEYGFHEYTEVKTVTIK 488
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 266 bits (682), Expect = 3e-84
Identities = 110/455 (24%), Positives = 193/455 (42%), Gaps = 24/455 (5%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
+ + A V+ + + + R + +++ ER +I + K E+
Sbjct: 59 EVDQA---VQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEA 115
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFL 134
A + + + A EP GV I WNYPF+
Sbjct: 116 EYDIDAAWQCIEYY-----AGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFM 170
Query: 135 LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL- 192
++ A+A GNA+V KPS + P + +LA++ E + + + VV+G S L
Sbjct: 171 IAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCH 230
Query: 193 DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKW 252
K+ +TG+ + VM +AK + V LELGGKSP++ L+ A R +M +
Sbjct: 231 HPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANF 290
Query: 253 GCNNGQACISPDHIITTKDYAPKLLESLKNELENF-YGKNPLESKDLSRIVNSNHFARLS 311
GQ C + + ++ P+ LE + + G L + +++ ++
Sbjct: 291 LTQ-GQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVL 349
Query: 312 KLLDDDKVSG-KIVHGGER-------DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPIL 363
+ K G +++ GGE KN ++P +L + D + EEIFGP++ +L
Sbjct: 350 GFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVL 409
Query: 364 TVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFG 423
D E+ N+ T LA+ +FT + + + AG IN ++ +PFG
Sbjct: 410 PFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINT--YSISPVEVPFG 467
Query: 424 GVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVP 458
G + SG G +G+ + D +S K V+ +GDV
Sbjct: 468 GYKMSGFGRENGQATVDYYSQLKTVIVE--MGDVD 500
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 237 bits (606), Expect = 2e-73
Identities = 102/443 (23%), Positives = 185/443 (41%), Gaps = 15/443 (3%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
+AA V+ FA + R L L ++ E + ++ KP +
Sbjct: 40 QVDAA---VRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSA 96
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFL 134
E+ + + ++ I +P GVV I+PWNYP +
Sbjct: 97 FNDEIPAIVDVFR---FFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLM 153
Query: 135 LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALL-- 192
++ + A+AAGN +VLKPSE+ P ++ LA+L + + ++ G L
Sbjct: 154 MAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTG 213
Query: 193 DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKW 252
K + TG+ +++ A + +ELGGK+PV+ +++ + +
Sbjct: 214 HPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGY 273
Query: 253 GCNNGQACISPDHIITTKDYAPKLLESLKNELENFY-GKNPLESKDLSRIVNSNHFARLS 311
N GQ C + I K L+E L + G ES +L + + H R+
Sbjct: 274 -YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVG 332
Query: 312 KLLDDDKVSG--KIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 368
K +++ K +G K++ GGE+ K N APTLL +D I+ +E+FGP++ + D
Sbjct: 333 KAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNE 392
Query: 369 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQES 428
E + N LA+ ++T + + + G +N + V +P GG + S
Sbjct: 393 EQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFML--VSEMPHGGQKLS 450
Query: 429 GMGAYHGKFSFDVFSHKKAVLSR 451
G G + + ++ + V+ +
Sbjct: 451 GYGKDMSLYGLEDYTVVRHVMVK 473
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 205 bits (523), Expect = 6e-61
Identities = 103/448 (22%), Positives = 187/448 (41%), Gaps = 18/448 (4%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
+AEAA ++ F + K R L ++ R+ ++ L ++ K +E+
Sbjct: 75 EAEAA---LEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEA 131
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFL 134
S + A L++ A + E P G ++I+PWN+P
Sbjct: 132 SADVAEAIDFIEYYARAALRYRY---PAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVA 188
Query: 135 LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE-YMDLSSIRVVEGAVAETSALL- 192
+ +VG +A GN ++ KP+E A + + ++ E + + G E A L
Sbjct: 189 IFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLV 248
Query: 193 -DQKWDKICYTGNSRVARIVMAAA------AKHLTPVLLELGGKSPVVFDSGINLKVACR 245
+ I +TG+ V + AA +E GGK+ ++ D + +A
Sbjct: 249 EHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAE 308
Query: 246 RMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSN 305
+++ +G GQ C + +I T+ +LE + E E+ DL +V++
Sbjct: 309 GVVVSAYGFQ-GQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAE 367
Query: 306 HFARLSKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILT 364
++ ++ K G++V GG+R + + IAPT+ +VP + I EEIFGP+L ++
Sbjct: 368 QERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIR 427
Query: 365 VDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGG 424
V ++ ++ N L +++ ++ + G L N V PFGG
Sbjct: 428 VKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGG 487
Query: 425 VQESGMGAYHGKFSF-DVFSHKKAVLSR 451
+ SG A G + +F KAV R
Sbjct: 488 FKLSGTNAKTGALDYLRLFLEMKAVAER 515
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 203 bits (518), Expect = 1e-60
Identities = 100/439 (22%), Positives = 186/439 (42%), Gaps = 12/439 (2%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
+ + + + + SY R + L + +L + I L +++ K +
Sbjct: 40 EVDYV---YASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA 96
Query: 75 SIYEVALLKT-SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF 133
V + + + E + A + EP G+VL ISP+NYP
Sbjct: 97 VSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV 156
Query: 134 LLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE-YMDLSSIRVVEGAVAETSALL 192
L+ + A+ AGN + KP S LLA+ E + + G +E +
Sbjct: 157 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYI 216
Query: 193 --DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMG 250
Q + I +TG++ + + A + P++LELGGK + +L++ + +I G
Sbjct: 217 VEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAG 274
Query: 251 KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARL 310
+G +GQ C + ++ + A +L+E ++ ++ NP + D++ ++++ +
Sbjct: 275 AFG-YSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYV 333
Query: 311 SKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED 370
L +D E + I P L V D + EE FGP+LPI+ V +E+
Sbjct: 334 EGL-INDANDKGATALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEE 392
Query: 371 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGM 430
+ +I N L A +FTN+ E + G + IN+ + PF G ++SG
Sbjct: 393 AIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQR-GTDNFPFLGAKKSGA 451
Query: 431 GAYHGKFSFDVFSHKKAVL 449
G K+S + + K+V+
Sbjct: 452 GIQGVKYSIEAMTTVKSVV 470
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 175 bits (443), Expect = 1e-49
Identities = 78/442 (17%), Positives = 169/442 (38%), Gaps = 10/442 (2%)
Query: 15 DAEAASLFVKELRGTFA-SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELE 73
+ E + L S + R++ L+ ++ + L + KP+
Sbjct: 53 EVERT---LDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSA 109
Query: 74 SSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF 133
+ A + + L K + T + + EP GVV I+P+NYP
Sbjct: 110 AVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPL 169
Query: 134 LLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLD 193
+++ + + GNA+V+KPS P +++ K + + + + + +
Sbjct: 170 FDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIV 229
Query: 194 QKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWG 253
+ + ++ELGG P + +L +A ++ G +
Sbjct: 230 ADDRVAAVSFTGSTEVGERVVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYS 289
Query: 254 CNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSK 312
GQ C + ++ + KL+E + L + +P + D+ +++ + +
Sbjct: 290 -YAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMA 348
Query: 313 LLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVP---RDSLIMSEEIFGPLLPILTVDKIE 369
++D G V G R + PTL+ +D ++ E+F P+ + V ++
Sbjct: 349 AIEDAVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLD 408
Query: 370 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESG 429
+ ++ N L A +F + ++ V + G + IND H + PFGG ++SG
Sbjct: 409 QAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRH-GIGYYPFGGRKKSG 467
Query: 430 MGAYHGKFSFDVFSHKKAVLSR 451
+ ++ + + K ++
Sbjct: 468 VFREGIGYAVEAVTAYKTIVFN 489
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 104 bits (260), Expect = 4e-25
Identities = 62/453 (13%), Positives = 142/453 (31%), Gaps = 61/453 (13%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPEL----ESSIYE 78
K++R + + + + +K + + L+ER +I++A R D++K ES +
Sbjct: 7 AKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDR 66
Query: 79 VALLKTSIKSA---LKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLL 135
+AL I + + P I + I + +
Sbjct: 67 LALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNV 126
Query: 136 SLDPVVGAIAAGNALVLKPSEVAPASSSL----LAKLVGEYMDLSSIRVVEGAVAETSAL 191
+++ + A+ +GN ++L+ A S+ + + + E S + L
Sbjct: 127 TVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLVL 186
Query: 192 LDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK 251
+ + R +++ + T +LE G + +F +I+
Sbjct: 187 EMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVIINA 246
Query: 252 WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLS 311
G + ++ K + + K+ +E + +
Sbjct: 247 KTQRPGTCNAAEKLLVHEKIA-----KEFLPVIVEELRKHGVEVRGCEKT---------- 291
Query: 312 KLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 371
++ +V E D E ++ I V ++++
Sbjct: 292 -----REIVPDVVPATEDD--------------------WPTEYLDLIIAIKVVKNVDEA 326
Query: 372 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 431
+ I + + + T N ++FV + A + +N + FG E G+
Sbjct: 327 IEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGA--EIGIS 384
Query: 432 A----YHGKFSFDVFSHKKAVLSRGFIGDVPVR 460
G + K V+ +G+ VR
Sbjct: 385 TQRFHARGPVGLRELTTYKFVV----LGEYHVR 413
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 80.2 bits (196), Expect = 1e-16
Identities = 59/455 (12%), Positives = 127/455 (27%), Gaps = 39/455 (8%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
+ A + + R S L+++ L R DI+ + PE+
Sbjct: 27 EVNQA---ATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRL 83
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAE-----IVPEPFGVVLIISPW 129
+ E+A ++ + + + + G V +
Sbjct: 84 TG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGAS 142
Query: 130 NYPFL--LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV-------GEYMDLSSIRV 180
N+P + A+AAG +++K P +S ++A+ + + ++
Sbjct: 143 NFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQ 202
Query: 181 VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG--- 237
+ + + + +TG+ R + A + P+ +
Sbjct: 203 GNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSA 262
Query: 238 -INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK 296
+ + E + S
Sbjct: 263 MRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQA-----FIETAQSLIRQQSPST 317
Query: 297 DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIF 356
L+ + ++ +++ DD + + + R EEIF
Sbjct: 318 LLTPGIRDSYQSQVVSRGSDDGIDVTFSQAESPCVASALFVTSS--ENWRKHPAWEEEIF 375
Query: 357 GPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ--QFVETV--SAGGLVIND-- 410
GP I+ + + D + L A + + Q Q + + AG LV N
Sbjct: 376 GPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWP 435
Query: 411 TAV---HLAVHSLPFGGVQESGMGAYHGKFSFDVF 442
T V + VH P+ S + G + +
Sbjct: 436 TGVEVGYAMVHGGPYPASTHSASTSV-GAEAIHRW 469
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 70.6 bits (172), Expect = 1e-13
Identities = 55/384 (14%), Positives = 112/384 (29%), Gaps = 49/384 (12%)
Query: 45 LKSLMKMLNEREPDIVDALRQDLDKPE---LESSIYEVALLKT-----SIKSALKELKHW 96
L + L I +A + DL + L S+ + L + +K++
Sbjct: 31 LYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKDVAEL 90
Query: 97 MTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSE 156
P + V +++ + + + +I +GNA +LK +
Sbjct: 91 EDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESRPEVIANITALSIKSGNAAILKGGK 150
Query: 157 VAPASSSLLAKLVGEYMDLS-----------SIRVVEGAVAETSALLDQKWDKICYTGNS 205
+ + +AK+V + + + V++ + + N+
Sbjct: 151 ESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNA 210
Query: 206 RVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 265
V +I PVL G + D +L A R + K N C + +
Sbjct: 211 LVRKIKDTT----KIPVLGHADGICSIYLDEDADLIKAKRISLDAK--TNYPAGCNAMET 264
Query: 266 IITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVH 325
++ ++ LE + K
Sbjct: 265 LLINPKFSKWWEVLENLTLEG------------------------GVTIHATKDLKTAYF 300
Query: 326 GGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 385
+ KL A + +E L V E + IN+ +
Sbjct: 301 DKLNELGKLTEAIQCKTVDADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDA 360
Query: 386 LFTNNKKLKQQFVETVSAGGLVIN 409
+ T NK ++F++ V + G+ N
Sbjct: 361 IVTENKANAEKFMKGVDSSGVYWN 384
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 493 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 96.12 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=2.4e-94 Score=756.08 Aligned_cols=442 Identities=24% Similarity=0.349 Sum_probs=411.4
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh---hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA---SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA 80 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~ 80 (493)
++|++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|++++++|++++++|+|||..++...|+.
T Consensus 38 t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia~~L~~~~eela~l~~~E~Gk~~~e~~~~ev~ 117 (494)
T d1bxsa_ 38 TEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLG 117 (494)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCchhhhhhhhhh
Confidence 5789999999999999999999999995 6999999999999999999999999999999999999999987656899
Q ss_pred HHHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchH
Q 011107 81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (493)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~ 160 (493)
.+++.+++++...+++... ..+ ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.
T Consensus 118 ~~~~~~~~~a~~~~~~~~~-~~~---~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKpse~tp~ 193 (494)
T d1bxsa_ 118 GCIKTLRYCAGWADKIQGR-TIP---MDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPL 193 (494)
T ss_dssp HHHHHHHHHHHHGGGCCEE-EEC---CSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCH
T ss_pred hhhHHHHHHhhhhhhhcce-eec---CCCCceeEEEEccEEEEEEEeCccchhHHHHHHHHHHHHcCCeEEEECCCCChH
Confidence 9999999998877665332 211 122446788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhc-cccchhhhcCCCCeEEEcC
Q 011107 161 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDS 236 (493)
Q Consensus 161 ~~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~-~~~~~~~elgG~~p~iV~~ 236 (493)
++..+++++.++ +|+|++|+|+| +.+.++.|++|+ |++|.||||+.+|+.|++.+++ ++||+++|+|||||+||++
T Consensus 194 ~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~i~~~aa~~~~~~~~lElGG~np~iV~~ 273 (494)
T d1bxsa_ 194 TALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFA 273 (494)
T ss_dssp HHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECT
T ss_pred HHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHHHHHHhcccCCCeEEEEcCCcCcEEECc
Confidence 999999999999 99999999999 456789999995 9999999999999999998885 6899999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 011107 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (493)
Q Consensus 237 daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~ 315 (493)
|||+|.|++.+++++| +|+||.|++++|||||++++|+|+++|++++++++.|+|. +++++||++++++++++.++++
T Consensus 274 dadl~~a~~~i~~~~~-~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~ 352 (494)
T d1bxsa_ 274 DADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIE 352 (494)
T ss_dssp TSCHHHHHHHHHHHHH-TTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHH
T ss_pred CcchhHhHHHHHHHHh-cCCCcccccceEEecccchhHHHHHHHHhhhhheeeeccCCCCCcCCCcCCHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999999999999999884 7899999999999999999999
Q ss_pred HHHh-CCeEEeCCcc-CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 316 DDKV-SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 316 ~a~~-~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
++++ ++++++||.. ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.
T Consensus 353 ~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~ 432 (494)
T d1bxsa_ 353 SGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDK 432 (494)
T ss_dssp HHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHH
T ss_pred HHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEECCHHHHHHHHhCCCCCCeEEEEeCCHHH
Confidence 9865 6799998875 4578999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 433 ~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~i~~~~ 489 (494)
T d1bxsa_ 433 AITVSSALQSGTVWVNCYSV--VSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 489 (494)
T ss_dssp HHHHHHHSCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHhCCEeEEEEcCCCC--cCCCCCcCccccccCChhhHHHHHHHhcceEEEEEec
Confidence 99999999999999998765 4578999999999999999999999999999999875
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=9.1e-94 Score=751.67 Aligned_cols=442 Identities=24% Similarity=0.367 Sum_probs=415.9
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
++|++++++.++.+|+++|+++|++||+.|+++|..+|.++|++++++|++++++|+++++.|+|||..+++ .|+..++
T Consensus 45 tge~i~~v~~a~~~dV~~AV~aA~~A~~~W~~~s~~eR~~iL~~~a~~L~~~~eela~~~~~etGkp~~ea~-~ev~~~~ 123 (503)
T d1a4sa_ 45 TGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAW 123 (503)
T ss_dssp TCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhhhcchhhh-hhhhhhh
Confidence 588999999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++...+........ ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.
T Consensus 124 ~~l~~~a~~~~~~~~~~~~----~~~~~~~~~~~~P~GVv~~I~p~NfP~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~ 199 (503)
T d1a4sa_ 124 QCIEYYAGLAPTLSGQHIQ----LPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGV 199 (503)
T ss_dssp HHHHHHHHHGGGCCEEEEE----CGGGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred hcccccccccccccccccc----cCCCcccccccccceeeecccCCCChHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 9999998877765432211 112456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
++++++.++ +|+|++|+|+|+.+.+..|++|+ |++|.||||+++|+.|++.+++++||+++|+|||||+||++|||+|
T Consensus 200 ~l~~~~~~aglP~gv~~~v~g~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGG~~p~iV~~dAdl~ 279 (503)
T d1a4sa_ 200 ILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELE 279 (503)
T ss_dssp HHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHH
T ss_pred HHHHHHHHhCcCCCeEEEecCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCcEEEECCCcCcEEECCCccHH
Confidence 999999999 99999999999889999999996 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| .|+||.|++++|+|||++++++|++++.+.+++++.|+|. +.+++||++++.++++++++++++..
T Consensus 280 ~a~~~i~~~~~-~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ 358 (503)
T d1a4sa_ 280 NAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKE 358 (503)
T ss_dssp HHHHHHHHTTC-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHhhhhhcchh-ccCCCccccCcceEEEechhhhHHHHHHHhhhhEeeccccccccccccccCHHHHHHHHHHHHHHHHc
Confidence 99999999999 9999999999999999999999999999999999998884 78999999999999999999999865
Q ss_pred CCeEEeCCccC-------CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 011107 320 SGKIVHGGERD-------KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (493)
Q Consensus 320 ~~~~~~gg~~~-------~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~ 392 (493)
++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 359 Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~an~~~~gL~~~i~t~d~~ 438 (503)
T d1a4sa_ 359 GARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDIS 438 (503)
T ss_dssp TCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred CCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHH
Confidence 77999999642 36899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEecC
Q 011107 393 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF 453 (493)
Q Consensus 393 ~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~~ 453 (493)
.+.++++++++|+|+||+++. ..+.+||||+|.||+|+++|.+++++||+.|+|+++..
T Consensus 439 ~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~~ 497 (503)
T d1a4sa_ 439 RAHRVAANLEAGTCYINTYSI--SPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMG 497 (503)
T ss_dssp HHHHHHHHSCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECCS
T ss_pred HHHHHHHhCCeeEEEEeCCCC--CCCCCCccCcccCcCCcchHHHHHHHhhCeEEEEEcCC
Confidence 999999999999999999765 35789999999999999999999999999999999864
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.8e-93 Score=743.61 Aligned_cols=443 Identities=22% Similarity=0.342 Sum_probs=404.3
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
++|++++++.++.+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|+++++.|+|||..++...++..+.
T Consensus 26 tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~~~~~~~ 105 (474)
T d1wnda_ 26 TGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIV 105 (474)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCChhHhhhccccccc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999998654556555
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
..++++......... . .......+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 106 ~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~a~ALaaGN~Vv~Kps~~~p~~~~ 182 (474)
T d1wnda_ 106 DVFRFFAGAARCLNG-L--AAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTAL 182 (474)
T ss_dssp HHHHHHHHHTTCCEE-E--CBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHH
T ss_pred ccccccccccccccc-c--ccccccCCcceEEEEecccceEEEeecchHhhhhhccHHHHHHhCCCEEEeCCCcCcHHHH
Confidence 555554443332211 1 1111123456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHH
Q 011107 164 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (493)
Q Consensus 164 ~l~~~l~~alP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~ 241 (493)
.+++++++++|+|++|+|+| +.+.++.|++|+ |++|.||||+++|+.|.+.+++++||+++|+|||||+||++|||++
T Consensus 183 ~~~~l~~~~lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~~~~k~~~lElgG~~p~iV~~dad~~ 262 (474)
T d1wnda_ 183 KLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIE 262 (474)
T ss_dssp HHHHHHTTTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHH
T ss_pred HHHHHHHHhCCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhhcCCCeEEEEcCCCCceEEcCchhhh
Confidence 99999998899999999999 567899999996 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHHh-
Q 011107 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV- 319 (493)
Q Consensus 242 ~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~- 319 (493)
.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++++.|++. +++++||+++..+.+++.+++++++.
T Consensus 263 ~a~~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ 341 (474)
T d1wnda_ 263 AVVEGVRTFGY-YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKAT 341 (474)
T ss_dssp HHHHHHHHHTT-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred hhhhhhhhhcc-cCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCCceecccccccccchHHHHHHHHHHC
Confidence 99999999999 9999999999999999999999999999999999988885 68999999999999999999999976
Q ss_pred CC-eEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 011107 320 SG-KIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (493)
Q Consensus 320 ~~-~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 397 (493)
++ .++.|+..+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++
T Consensus 342 ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~deai~~an~~~~GL~a~i~t~d~~~~~~~ 421 (474)
T d1wnda_ 342 GHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRV 421 (474)
T ss_dssp SSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHH
T ss_pred CCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHH
Confidence 44 566666553 4689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 398 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 398 ~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|++++
T Consensus 422 ~~~l~~g~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~gl~~~t~~k~v~i~~ 474 (474)
T d1wnda_ 422 SARLQYGCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVKH 474 (474)
T ss_dssp HHHCCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHhCCccEEEEeCCCC--ccCCCCcccccccccCccCHHHHHHHcCCEEEEEEeC
Confidence 9999999999998765 4678999999999999999999999999999999874
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=2e-93 Score=748.51 Aligned_cols=443 Identities=24% Similarity=0.349 Sum_probs=411.5
Q ss_pred chhhhhcccCCCCHHHHHHHHHHHHHHhh---hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHH
Q 011107 3 SEEETKKKNEVFDAEAASLFVKELRGTFA---SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEV 79 (493)
Q Consensus 3 ~~~~~~~~~~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev 79 (493)
.+++++++++.++.+|+++|+++|++||+ .|++++.++|.++|+++++.|++++++|++++++|+|||..++...|+
T Consensus 37 ~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~l~~~~eela~~~~~E~GK~~~ea~~~ev 116 (494)
T d1o04a_ 37 STGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDL 116 (494)
T ss_dssp TTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHH
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcchhhhhhhHH
Confidence 35889999999999999999999999985 699999999999999999999999999999999999999999866799
Q ss_pred HHHHHHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCch
Q 011107 80 ALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAP 159 (493)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~ 159 (493)
..++..+++++....++... ..+ ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|
T Consensus 117 ~~~~~~~~~~a~~~~~~~~~-~~~---~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p 192 (494)
T d1o04a_ 117 DMVLKCLRYYAGWADKYHGK-TIP---IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 192 (494)
T ss_dssp HHHHHHHHHHHHHTTTCCEE-EEC---CSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSC
T ss_pred HHHHHHHHHHHHHHHHhcCc-eec---cCCCceeEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCeEEEeCCCCCc
Confidence 99999999998877765332 111 12244577899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHh-ccccchhhhcCCCCeEEEc
Q 011107 160 ASSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFD 235 (493)
Q Consensus 160 ~~~~~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~-~~~~~~~~elgG~~p~iV~ 235 (493)
.++.++.+++.++ +|+|++|+|+| +.+.++.|+.|+ ++.|.||||+++|+.|++.++ +++||+++|+|||||+||+
T Consensus 193 ~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~~~~lElGG~~p~iV~ 272 (494)
T d1o04a_ 193 LTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIM 272 (494)
T ss_dssp HHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEEC
T ss_pred HHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHHHHHhhccCCCeEEEECCCcCcEEEc
Confidence 9999999999998 99999999999 467899999995 999999999999999988775 6899999999999999999
Q ss_pred CCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHH
Q 011107 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLL 314 (493)
Q Consensus 236 ~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i 314 (493)
+|||+|.|++.+++++| +|+||.|+++++||||++++|+|++.+.++++.++.|+|. +++++||++++.+++++.+++
T Consensus 273 ~dAdl~~a~~~i~~~~~-~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i 351 (494)
T d1o04a_ 273 SDADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYI 351 (494)
T ss_dssp TTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHH
T ss_pred cCccHHHHHHhhhhhcc-ccCcccccccccccccchhhHHHHHHHHHHhhheeecCcccccCccCCCCCHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999999999999999999998884 788999999999999999999
Q ss_pred HHHHh-CCeEEeCCccC-CCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 011107 315 DDDKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (493)
Q Consensus 315 ~~a~~-~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~ 392 (493)
+++++ ++++++||... +.|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+
T Consensus 352 ~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~i~s~d~~ 431 (494)
T d1o04a_ 352 NTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLD 431 (494)
T ss_dssp HHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred HHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHH
Confidence 99876 67999999763 46899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEec
Q 011107 393 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG 452 (493)
Q Consensus 393 ~~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~ 452 (493)
.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|+|+++.
T Consensus 432 ~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~v~~~~ 489 (494)
T d1o04a_ 432 KANYLSQALQAGTVWVNCYDV--FGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 489 (494)
T ss_dssp HHHHHHHHCCSSEEEESCSSC--CCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEEC
T ss_pred HHHHHHHhCCeeEEEEcCCCC--CCCCCCcCCcccccCCchhHHHHHHHhcCeEEEEEeC
Confidence 999999999999999998765 3578999999999999999999999999999998864
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.2e-92 Score=746.39 Aligned_cols=444 Identities=22% Similarity=0.336 Sum_probs=413.0
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 83 (493)
.+|++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|+++++.|+|||..+++ .|+..++
T Consensus 61 tge~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 139 (516)
T d1uzba_ 61 PSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAI 139 (516)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCeEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc-hhHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999996 5999999
Q ss_pred HHHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
+.+++++.....+....... ........+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.
T Consensus 140 ~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~ 217 (516)
T d1uzba_ 140 DFIEYYARAALRYRYPAVEV--VPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGA 217 (516)
T ss_dssp HHHHHHHHHHGGGCSSCCCC--CCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHhhhhccccc--ccccccceeEEeeccCccccccccccccccccccccchhhhcccccccccchhHHHHH
Confidence 99999999887764432211 1122345677899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHh------ccccchhhhcCCCCeEEE
Q 011107 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPVVF 234 (493)
Q Consensus 164 ~l~~~l~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~------~~~~~~~~elgG~~p~iV 234 (493)
.+.+++.++ +|+|++|+|+| +.+.++.|++|+ |++|.||||+.+|+.|++.++ .++||+++|+|||||+||
T Consensus 218 ~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~~aa~~~~~~~~~k~v~lElgG~~p~iV 297 (516)
T d1uzba_ 218 KVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIV 297 (516)
T ss_dssp HHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEE
T ss_pred HHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHHHHhhcccchhhhhhheeeccCccceee
Confidence 999999999 99999999999 567899999995 999999999999999999887 678999999999999999
Q ss_pred cCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHH
Q 011107 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLL 314 (493)
Q Consensus 235 ~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i 314 (493)
++|||+|.|++.+++++| .|+||.|++++|+|||++++|+|++++.+++++++.|+.++++++||++++.+++++++++
T Consensus 298 ~~dAd~~~aa~~i~~~~~-~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i 376 (516)
T d1uzba_ 298 DETADFDLAAEGVVVSAY-GFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYI 376 (516)
T ss_dssp CTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHHHHH
T ss_pred ecchhHHHHHHHHhhhhc-ccCCCcccccCccccccccccchhhHHHHHHHhcccCCCcccCccccccCHHHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999999999999988767889999999999999999999
Q ss_pred HHHHhCCeEEeCCcc-CCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 315 DDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 315 ~~a~~~~~~~~gg~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
+++++.|.+++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++
T Consensus 377 ~~a~~~Ga~v~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~d~eeai~~an~~~~gL~a~i~s~d~~~ 456 (516)
T d1uzba_ 377 EIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREH 456 (516)
T ss_dssp HHHTTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHH
T ss_pred HHHHHCCCEEECCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEEeCCHHHHHHHHHCCCCCCEEEEEcCCHHH
Confidence 999887777777765 4578999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcch-HHHHHHhhhccEEeEe
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG-KFSFDVFSHKKAVLSR 451 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g-~~~~~~~t~~k~v~~~ 451 (493)
++++++++++|+|+||+++.+...+.+||||+|.||+|+++| .+++++||+.|+|..+
T Consensus 457 ~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G~~~~l~~~~~~k~v~~r 515 (516)
T d1uzba_ 457 LEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515 (516)
T ss_dssp HHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred HHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcccchHHHHHHhCCeeeEEEc
Confidence 999999999999999998777667889999999999999865 7899999999999854
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.9e-90 Score=716.98 Aligned_cols=442 Identities=47% Similarity=0.795 Sum_probs=406.8
Q ss_pred HHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhcC
Q 011107 19 ASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMT 98 (493)
Q Consensus 19 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 98 (493)
|++|+++||+||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.++++++.+..+..
T Consensus 2 v~~av~~Ar~Af~~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~ 81 (446)
T d1ad3a_ 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAE 81 (446)
T ss_dssp HHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 78999999999999999999999999999999999999999999999999999999777999999999999999988876
Q ss_pred CcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHhhhcCCCcE
Q 011107 99 PEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI 178 (493)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~l~~~l~~alP~g~v 178 (493)
.+.........+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+++++.+.+|++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~~~~~~~ 161 (446)
T d1ad3a_ 82 DEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLY 161 (446)
T ss_dssp CEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHSCTTTE
T ss_pred ccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceecccccccccccccccccccc
Confidence 65444333334456688999999999999999999999999999999999999999999999999999999888999999
Q ss_pred EEEeCChHhHHHHHhCCCCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCCHHHHHHHHHHhhcccCCCC
Q 011107 179 RVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQ 258 (493)
Q Consensus 179 ~vv~g~~~~~~~L~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daDl~~Aa~~i~~~~~~~~~Gq 258 (493)
+++.+.......++.+++|.|.||||+.+|+.|++.+++++||+++|+|||||+||++|||+|.|++.+++++| .|+||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~v~fTGs~~~G~~i~~~aa~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~-~~~GQ 240 (446)
T d1ad3a_ 162 LVVKGGVPETTELLKERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQ 240 (446)
T ss_dssp EECCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHH-TTTTC
T ss_pred ccccccchhhhhhcccccCceEEECcHHHHHHHHHHHHhcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHh-cCCCC
Confidence 99998777776677667999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred cccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCeEEeCCccCCCCceeec
Q 011107 259 ACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAP 338 (493)
Q Consensus 259 ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~P 338 (493)
.|++++|||||++++|+|++++.++++.+.+.++++++++||++++.+.+++..++++ ++...|+..+..++|+.|
T Consensus 241 ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~----a~~~~g~~~~~~~~~~~P 316 (446)
T d1ad3a_ 241 TCVAPDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDN----QKVAHGGTWDQSSRYIAP 316 (446)
T ss_dssp CTTSCCEEEECGGGHHHHHHHHHHHHHHHHCSCGGGCTTSCCCSCHHHHHHHHHTTTT----SCEEECCCEETTTTEECC
T ss_pred ccccCCccccccchhHHHHHhhhhhhheeecccccccccccchhhhhhhhhhhccccc----hhcccceeecCCCCCcCC
Confidence 9999999999999999999999999988865555688999999999999988887764 445555555667889999
Q ss_pred eEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcccceEEEcCCCcccCCC
Q 011107 339 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVH 418 (493)
Q Consensus 339 tvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~ 418 (493)
||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+++.+...+
T Consensus 317 til~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~ 396 (446)
T d1ad3a_ 317 TILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVP 396 (446)
T ss_dssp EEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESSSSGGGGCT
T ss_pred EEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeCCccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987776778
Q ss_pred CCCccCCCCCCCCCcchHHHHHHhhhccEEeEecCC--CCCCccCCCCc
Q 011107 419 SLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFI--GDVPVRYPPYT 465 (493)
Q Consensus 419 ~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~~~--~~~~~~~~p~~ 465 (493)
.+||||+|.||+|+++|.+|+++||+.|+|+++.+. .|.+++||||.
T Consensus 397 ~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~~pp~~ 445 (446)
T d1ad3a_ 397 TLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVKSLLNEEAHKARYPPSP 445 (446)
T ss_dssp TSCCCCCGGGEECCCSTHHHHHHTEEEEEEEECCCCCCCTTGGGSSSCC
T ss_pred CCCccccccceeccchHHHHHHHHhceeEEEEccCCCCccccccCCCCC
Confidence 999999999999999999999999999999998754 35678999985
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=2e-85 Score=689.47 Aligned_cols=451 Identities=20% Similarity=0.311 Sum_probs=405.2
Q ss_pred hhhhhcccCCCCHHHHHHHHHHHHHHhh-hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETKKKNEVFDAEAASLFVKELRGTFA-SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
+++++++++.++.+|+++|+++|++|+. .|+.+|.++|.++|++++++|+++.++|+++++.|+|||..+++ .|+..+
T Consensus 39 t~~~i~~v~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~etGk~~~~a~-~Ev~~~ 117 (499)
T d1ky8a_ 39 DLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAA 117 (499)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHh-hhhhcc
Confidence 5788999999999999999999988887 79999999999999999999999999999999999999999996 699999
Q ss_pred HHHHHHHHHHHHhhcCCcccc-cccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHH
Q 011107 83 KTSIKSALKELKHWMTPEKAK-TSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~ 161 (493)
++.+++++..++++....... ..........+++|+|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+
T Consensus 118 i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGn~Vi~Kps~~~~~~ 197 (499)
T d1ky8a_ 118 VDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLP 197 (499)
T ss_dssp HHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHH
T ss_pred cccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccccccchhhhhcchhhhcccccccccccccchhh
Confidence 999999888777654322211 1111223456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCCCC
Q 011107 162 SSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (493)
Q Consensus 162 ~~~l~~~l~~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~daD 239 (493)
+..+.+++.++ +|.++++++.++.+.+..|+.|+ ++.+.||||...++.+.+.++ .+|+++|+|||||+||++|||
T Consensus 198 ~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~i~~~~~--~~~~~lElgG~np~iV~~dAd 275 (499)
T d1ky8a_ 198 AAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVLEDAD 275 (499)
T ss_dssp HHHHHHHHHHHTCCTTSEEECCCCGGGGHHHHHCTTCCEEEEESCHHHHHHHHHHHC--SSEEEEECCCCEEEEECTTSC
T ss_pred hhhhccccccccccceeeecccCChHHHHHHhhccceeEEEeecccccceEEeeccc--ccceEEecCCCCeEEEcCCcC
Confidence 99999999999 89999999998888899999995 999999999999999988765 589999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHHHH
Q 011107 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (493)
Q Consensus 240 l~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (493)
+|.|++.+++++| +|+||.|+++++||||++++|+|+++|++++++++.|+|. +++++||+++++++++++++++++.
T Consensus 276 l~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~ 354 (499)
T d1ky8a_ 276 LDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAV 354 (499)
T ss_dssp HHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhh-ccCcccccccccccccchhHHHHHHHHHHHHHhCccCCCCCccccccccchHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999985 7889999999999999999999996
Q ss_pred h-CCeEEeCCccCCCCceeec---eEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 011107 319 V-SGKIVHGGERDKNKLRIAP---TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (493)
Q Consensus 319 ~-~~~~~~gg~~~~~g~~~~P---tvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 394 (493)
. +++++.||...... +..+ ++..++.+||++++||+||||++|++|+|.+||++++|+++|||+++|||+|.+++
T Consensus 355 ~~ga~v~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gLt~sv~s~d~~~~ 433 (499)
T d1ky8a_ 355 EKGGRVLAGGRRLGPT-YVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKI 433 (499)
T ss_dssp HTTCEEEECCCEEETT-EECCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHH
T ss_pred HcCCEEeeeecccccc-ccccccccccccCCCCChhhhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHH
Confidence 5 67999988764333 3333 33345668999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEecCCCCCCccC
Q 011107 395 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRY 461 (493)
Q Consensus 395 ~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~~~~~~~~~~~ 461 (493)
+++++++++|+|+||+++.+ ..+.+||||+|.||+|+++|.+|+++||+.|+|++++ .....++|
T Consensus 434 ~~~~~~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~~-~~~~~~~y 498 (499)
T d1ky8a_ 434 RRAVRLLEVGAIYINDMPRH-GIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNY-KGKGVWKY 498 (499)
T ss_dssp HHHHHHCCSSEEEETSCCCC-TTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEEC-TTSSSCSC
T ss_pred HHHHHhCCEeEEEEeCCCCC-CCCCCCccccccCcCCCCCHHHHHHHhhCEEEEEEcC-CCCCCCCC
Confidence 99999999999999998765 4678999999999999999999999999999999975 33334444
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=5.7e-83 Score=668.31 Aligned_cols=442 Identities=23% Similarity=0.348 Sum_probs=403.1
Q ss_pred chhhhhcccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 3 ~~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
.+++++++++.++.+|+++|+++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..+++ .|+...
T Consensus 25 ~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~~W~~~s~~~R~~iL~~~a~~L~~~~~~la~~~~~e~Gk~~~~a~-~e~~~~ 103 (474)
T d1euha_ 25 ASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRT 103 (474)
T ss_dssp TTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHH
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCcchhc-cccchh
Confidence 3578999999999999999999999999999999999999999999999999999999999999999999986 599999
Q ss_pred HHHHHHHHHHHHhhcCCccccc--ccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchH
Q 011107 83 KTSIKSALKELKHWMTPEKAKT--SITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~ 160 (493)
+..++++............... .....+...+++++|+|||++|+|||||+...+..+++||++||+||+|||+.+|.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~~~~~~~~~~aL~aGN~vV~Kps~~~~~ 183 (474)
T d1euha_ 104 AEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSI 183 (474)
T ss_dssp HHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHH
T ss_pred HHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccchhhhhhchhhhhccccceecccccchH
Confidence 9999988877665432211111 11122334578899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEEEcCC
Q 011107 161 SSSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (493)
Q Consensus 161 ~~~~l~~~l~~a-lP~g~v~vv~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~iV~~d 237 (493)
++.++.+++.++ +|+|++|+++|+ .+.++.|+.|+ ++.|.||||..+++.+.+.++ .+|+++|+||+||+||++|
T Consensus 184 ~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~i~~~a~--~k~~~~e~gG~~~~iV~~d 261 (474)
T d1euha_ 184 SGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLED 261 (474)
T ss_dssp HHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT--TSCEEEECCCCEEEEECTT
T ss_pred HHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccchhhhcc--cceEEEecCCcceEEEECC
Confidence 999999999999 999999999995 67889999995 999999999999999988765 6899999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 011107 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDD 317 (493)
Q Consensus 238 aDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a 317 (493)
||++.|++.+++++| +|+||.|+++++||||++++|+|++.++.+...++.+++.+..+++|++.....+++...+...
T Consensus 262 Adl~~aa~~i~~~~~-~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (474)
T d1euha_ 262 ADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDA 340 (474)
T ss_dssp SCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHh-hCCCCccccccccchhhhhhhhhhHhhhhhhhhccccCcccccccccccchHHHHHHHHHHHhh
Confidence 999999999999999 9999999999999999999999999999999999988887777899999999999999999887
Q ss_pred Hh-CCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHH
Q 011107 318 KV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396 (493)
Q Consensus 318 ~~-~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 396 (493)
.. ++..+.++. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+++
T Consensus 341 ~~~~~~~~~~~~--~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~glta~v~s~d~~~~~~ 418 (474)
T d1euha_ 341 NDKGATALTEIK--REGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFG 418 (474)
T ss_dssp HHTTCEECSCCC--EETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHH
T ss_pred hcccccccccCC--CCCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCCHHHHHHHHHCCCCCCeEEEEeCCHHHHHH
Confidence 65 445544332 368999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccceEEEcCCCcccCCCCCCccCCCCCCCCCcchHHHHHHhhhccEEeEe
Q 011107 397 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 451 (493)
Q Consensus 397 ~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~~~ 451 (493)
+++++++|+|+||+++.+ ..+.+||||+|.||+|+++|++|+++||+.|+|+++
T Consensus 419 ~~~~l~~g~v~iN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 472 (474)
T d1euha_ 419 IAEQLEVGTVHINNKTQR-GTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 472 (474)
T ss_dssp HHHHSCSSEEEESSCCCC-CSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred HHHhCCEEEEEEECCCCC-CCCCCCccccccCccCccCHHHHHHHhCcEEEEEEe
Confidence 999999999999997654 578899999999999999999999999999999875
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=5.8e-76 Score=616.42 Aligned_cols=430 Identities=17% Similarity=0.204 Sum_probs=357.9
Q ss_pred hhhhhc-ccCCCCHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 011107 4 EEETKK-KNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (493)
Q Consensus 4 ~~~~~~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 82 (493)
.+|+|+ +++.++.+|+++|+++|++||..|+++|.++|.++|++++++|++++++|+++++.|+|||..+++ .|+..+
T Consensus 12 tge~l~~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~~~a~-~Ev~~~ 90 (504)
T d1ez0a_ 12 TGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLT-GEIART 90 (504)
T ss_dssp TSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCCcchhccCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 578887 799999999999999999999999999999999999999999999999999999999999999996 699999
Q ss_pred HHHHHHHHHHHHhhcCCccccc-----ccccCCCCceeeeecceEEEEEccCchhHHhhh--hHHHHHHHhCCEEEEeCC
Q 011107 83 KTSIKSALKELKHWMTPEKAKT-----SITTFPSSAEIVPEPFGVVLIISPWNYPFLLSL--DPVVGAIAAGNALVLKPS 155 (493)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~--~~~~~AL~aGN~Vvlkps 155 (493)
++.++++++.+++....+.... .........+..++|+|||++|+|||||+...+ +++++||++||+||+|||
T Consensus 91 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALaaGN~VVlKPs 170 (504)
T d1ez0a_ 91 ANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGH 170 (504)
T ss_dssp HHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHHHHhccceecCc
Confidence 9999999998887654332211 111122345678899999999999999997554 589999999999999999
Q ss_pred CCchHHHHHHHHHH----hhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhh--hc
Q 011107 156 EVAPASSSLLAKLV----GEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLL--EL 226 (493)
Q Consensus 156 ~~~~~~~~~l~~~l----~~a-lP~g~v~vv~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~--el 226 (493)
+.+|.++.++.+++ .++ +|+|++|+|+| +.+.++.|++|+ |++|+||||+.+|+.|.+.++++++|+.+ |+
T Consensus 171 ~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~~~~~~~l~~El 250 (504)
T d1ez0a_ 171 TAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGEL 250 (504)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEEC
T ss_pred ccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhhcccccccccccc
Confidence 99999987776654 455 89999999999 567899999995 99999999999999999999999988655 99
Q ss_pred CCCCeEEEcCCCCHHHHH--HHHHHhhcccCCCCcccCCCEEEEcCcch-HHHHHHHHHHHHhhcCCCCCCCCcccccCC
Q 011107 227 GGKSPVVFDSGINLKVAC--RRMIMGKWGCNNGQACISPDHIITTKDYA-PKLLESLKNELENFYGKNPLESKDLSRIVN 303 (493)
Q Consensus 227 gG~~p~iV~~daDl~~Aa--~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~ 303 (493)
|||||+||++|||++.|+ +.++.++| +|+||.|++++++||+++.+ +.|++.+++.++. + ++++.+||+++
T Consensus 251 GGknp~iV~~dAd~~~Aa~~~~~~~~~~-~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~---~--~~~~~~gp~i~ 324 (504)
T d1ez0a_ 251 GAINPTFIFPSAMRAKADLADQFVASMT-MGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQ---Q--SPSTLLTPGIR 324 (504)
T ss_dssp CCCCEEEECHHHHHHCTTHHHHHHHHHT-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHH---C--CCBCCSSHHHH
T ss_pred cccccccccccccHHHHhhhhccccchh-hccCccccccccccchhhhhHHHHhhhhhhhhhh---c--ccccccccchh
Confidence 999999999999999875 47899999 99999999999999888866 4566666655443 2 23678999999
Q ss_pred HHHHHHHHHHHHHHHh-CCeEEeCCccCCCCceeeceEe---cCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCC
Q 011107 304 SNHFARLSKLLDDDKV-SGKIVHGGERDKNKLRIAPTLL---LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 379 (493)
Q Consensus 304 ~~~~~~~~~~i~~a~~-~~~~~~gg~~~~~g~~~~Ptvl---~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~ 379 (493)
+.+++++ ++.+.. +..+..||.. +.+..|+++ .++..++++++||+||||++|++|+|+||||+++|+++
T Consensus 325 ~~~~~~v---i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~an~~~ 398 (504)
T d1ez0a_ 325 DSYQSQV---VSRGSDDGIDVTFSQAE---SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLA 398 (504)
T ss_dssp HHHHHHH---HHHHTSTTEEEEECCCC---TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCC
T ss_pred hhhhhhh---hhhhhhhhhhccccccc---ccccCCccccccccccccchhhcccccCCeeeeeecCCHHHHHHHHHCCC
Confidence 8887765 444444 4466666643 233344433 33445788999999999999999999999999999999
Q ss_pred CCcEEEEecC--CHHHHHHHHhhcc--cceEEEcCCCccc-----CCCCCCccCCCCCCCCCcchHHHHHHhhhccE
Q 011107 380 KPLAAYLFTN--NKKLKQQFVETVS--AGGLVINDTAVHL-----AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 447 (493)
Q Consensus 380 ~gl~a~v~t~--d~~~~~~~~~~l~--~g~v~iN~~~~~~-----~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~ 447 (493)
|||+++|||+ |..++.+++++++ +|+|+||+++++. ..++.||||.+.||.| ..|.+++++|+++.+
T Consensus 399 ~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~-~~G~~~i~~f~r~v~ 474 (504)
T d1ez0a_ 399 GSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAST-SVGAEAIHRWLRPVA 474 (504)
T ss_dssp CEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCC-SSSGGGGGGGEEEEE
T ss_pred CCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCCCC-cchHHHHHHHhchhh
Confidence 9999999996 5668999999986 8999999865432 2344689999999955 568999999986544
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.2e-64 Score=517.82 Aligned_cols=385 Identities=15% Similarity=0.188 Sum_probs=298.1
Q ss_pred HHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHH------------HHHHHH
Q 011107 17 EAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYE------------VALLKT 84 (493)
Q Consensus 17 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~e------------v~~~~~ 84 (493)
+|+++++++|++||+.|+.+|.++|.++|++++++|++|+++|+++++.|+||+..++.. | +..+++
T Consensus 1 ee~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~-e~~~~rl~~~~~~i~~~~~ 79 (414)
T d1o20a_ 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVK-ESLVDRLALNDKRIDEMIK 79 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCC-HHHHHHHCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhcccc-HHHHHHHhccHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999887532 3 333344
Q ss_pred HHHHHHHHHHhhcCCcccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHHH
Q 011107 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (493)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~~ 164 (493)
.+++++..... .................++|+||++++.|||||+.++++++++||++||+||+|||+.+|.++..
T Consensus 80 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~ 155 (414)
T d1o20a_ 80 ACETVIGLKDP----VGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKA 155 (414)
T ss_dssp HHHHHHHSCCC----TTCEEEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHH
T ss_pred HHHHHHHhhhh----ccccccccccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccch
Confidence 44433321111 01111111223456778899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh-cCCC----cEEEEeC-ChHhHHHHHhC-C-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCC-eEEEc
Q 011107 165 LAKLVGEY-MDLS----SIRVVEG-AVAETSALLDQ-K-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKS-PVVFD 235 (493)
Q Consensus 165 l~~~l~~a-lP~g----~v~vv~g-~~~~~~~L~~~-~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~-p~iV~ 235 (493)
+++++.++ .|.+ +++.+.+ ..+....++.+ . ...++++| +..+.+.++++.+++++|+||+| |+||+
T Consensus 156 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~a~~~~~~~~le~gGgn~~viv~ 231 (414)
T d1o20a_ 156 IVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRG----GYGLISFVRDNATVPVLETGVGNCHIFVD 231 (414)
T ss_dssp HHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECS----CHHHHHHHHHHCSSCBCCCCCCCEEEEEC
T ss_pred hhhHHHhhhhhccccccccccccccchhhhhhcccccccCeEEEccc----HHHHHHHhhhccccceecccCCCCCeecc
Confidence 99999887 4444 4666665 44556666654 3 44444444 44555666677788888888766 58889
Q ss_pred CCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHH
Q 011107 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLD 315 (493)
Q Consensus 236 ~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~ 315 (493)
+|||++.|++.++.++| .| ||.|++++|++||+++||+|+++|.+...+...+++ ..+..
T Consensus 232 ~dAd~~~A~~~~~~~~~-~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~---------~~~~~--------- 291 (414)
T d1o20a_ 232 ESADLKKAVPVIINAKT-QR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVR---------GCEKT--------- 291 (414)
T ss_dssp TTSCHHHHHHHHHHHHH-SC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEE---------ECHHH---------
T ss_pred cccchhhhhhHHHhhhh-cC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCccc---------cchhh---------
Confidence 99999999999999988 76 999999999999999999999999988876543221 11100
Q ss_pred HHHhCCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 011107 316 DDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (493)
Q Consensus 316 ~a~~~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 395 (493)
..+.+.+... ....+++|+||||++|++|+|+||||+++|+++|||+++|||+|.++++
T Consensus 292 ------------------~~~~~~~~~~---~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~ 350 (414)
T d1o20a_ 292 ------------------REIVPDVVPA---TEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAK 350 (414)
T ss_dssp ------------------HHHSTTSEEC---CGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHH
T ss_pred ------------------hhhcccceec---ccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHH
Confidence 0111111111 2234689999999999999999999999999999999999999999999
Q ss_pred HHHhhcccceEEEcCCCcccCCCCCCccCCCCCCC--CCcc--hHHHHHHhhhccEEeEecC
Q 011107 396 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGM--GAYH--GKFSFDVFSHKKAVLSRGF 453 (493)
Q Consensus 396 ~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~--G~~~--g~~~~~~~t~~k~v~~~~~ 453 (493)
++++++++|.|+||+++.+. ...|||+.+.+|+ |+.+ |++|+++||+.|+|+++++
T Consensus 351 ~~~~~i~~G~V~IN~~~~~~--~~~~~g~g~~~G~~~~~~~~~G~~gl~~~t~~K~vv~~~~ 410 (414)
T d1o20a_ 351 KFVSEIDAAAVYVNASTRFT--DGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGEY 410 (414)
T ss_dssp HHHHHCCSSEEEESSCGGGC--STTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECSS
T ss_pred HHHHhCCeeEEEEeCCCcCC--CCCCCCCCCceeccCCCCCCCchhHHHHhCeEEEEEECCC
Confidence 99999999999999876543 3445555555554 3443 8999999999999988764
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.5e-51 Score=419.50 Aligned_cols=399 Identities=18% Similarity=0.165 Sum_probs=271.4
Q ss_pred HHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHH------HhhcCCCchhh-hH-----HHHHHHHHH
Q 011107 18 AASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDAL------RQDLDKPELES-SI-----YEVALLKTS 85 (493)
Q Consensus 18 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~------~~e~Gk~~~~a-~~-----~ev~~~~~~ 85 (493)
.+++++++|++|++.|+.+|.++|.++|+++++.|+++.++|+++. +.+.|++...- ++ ..+...++.
T Consensus 4 ~~e~~~~~Ak~A~~~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~~~ 83 (436)
T d1vlua_ 4 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 83 (436)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHHHH
Confidence 5678899999999999999999999999999999999999998854 44455442210 00 012222222
Q ss_pred HHHHHHHHHhhcCCc--ccccccccCCCCceeeeecceEEEEEccCchhHHhhhhHHHHHHHhCCEEEEeCCCCchHHHH
Q 011107 86 IKSALKELKHWMTPE--KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (493)
Q Consensus 86 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~Vvlkps~~~~~~~~ 163 (493)
++. +..+..+. .........+...+..+.|+||+++| |+++| ..++...++||++||+||+||++.++.++.
T Consensus 84 l~~----i~~~~dpvg~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~ 157 (436)
T d1vlua_ 84 IKD----VAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFR 157 (436)
T ss_dssp HHH----HHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHH
T ss_pred HHH----HHhccccceeEeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHH
Confidence 222 22221111 11100111233456788999999988 66667 667788899999999999999999999998
Q ss_pred HHHHHHh--------hh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEeCCHHHHHHHHHHHhccccchhhhcCCCCeEE
Q 011107 164 LLAKLVG--------EY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV 233 (493)
Q Consensus 164 ~l~~~l~--------~a-lP~g~v~vv~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~i~~~a~~~~~~~~~elgG~~p~i 233 (493)
.++++++ ++ +|++++|++++..+.+..|..|+ ||.|+||||...++.+.+.+ .+|++.++||++|+|
T Consensus 158 ~l~~~~~~al~~a~~~aGlP~~~i~~v~~~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~---~~pvi~~~~G~~~~~ 234 (436)
T d1vlua_ 158 EMAKIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIY 234 (436)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTTSEEECCCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEE
T ss_pred HHHHHHHHhhhhhccccCCCCceEEEecchhHHHHHhccCCCCceEEEecCCceeeeeeccc---cceEEEecCCcccee
Confidence 8877764 45 89999999998778888888885 99999999999888876543 259999999999999
Q ss_pred EcCCCCHHHHHHHHHHhhcccCCCCcccCCCEEEEcCcchHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHH
Q 011107 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKL 313 (493)
Q Consensus 234 V~~daDl~~Aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~ 313 (493)
|++|||+|.|++.++.++| ++.|| |++.++++||+++++.|...+......-. .+. .++.........
T Consensus 235 Vd~~ADl~~A~~~i~~ak~-~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~gv--------~l~--~~~~~~~~~~~~ 302 (436)
T d1vlua_ 235 LDEDADLIKAKRISLDAKT-NYPAG-CNAMETLLINPKFSKWWEVLENLTLEGGV--------TIH--ATKDLKTAYFDK 302 (436)
T ss_dssp ECTTCCHHHHHHHHHHTTC-C-----CCCCEEEEECTTSTTHHHHHHHHHHHHCC--------CBE--ECHHHHHHHHHH
T ss_pred ecccccHHHHHHHHHHHhc-cCCCc-cccccceeecHhhhhhhhhhHHHHHhCCc--------EEE--eCHHHHHHhhhh
Confidence 9999999999999999999 88886 88999999999999888655444333211 000 112111111111
Q ss_pred HHHHHhCCeEEeCCccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 011107 314 LDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (493)
Q Consensus 314 i~~a~~~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 393 (493)
+. ..+.. .+....|++....+ .-+.+|.|+|+++|++++|+||||+++|+.++|||++|||+|.+.
T Consensus 303 ~~---~~~~~--------~~~~~~~~~~~~~~---~d~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~ 368 (436)
T d1vlua_ 303 LN---ELGKL--------TEAIQCKTVDADEE---QDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKAN 368 (436)
T ss_dssp HH---HHTCC--------CHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHH
T ss_pred hh---hcccc--------cccccccccCCCcc---cchhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCHHH
Confidence 11 11110 11122333332222 226899999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEEcCCCcccCCCCCCccCCCCCCC--CC--cchHHHHHHhhhccEEeEecC
Q 011107 394 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGM--GA--YHGKFSFDVFSHKKAVLSRGF 453 (493)
Q Consensus 394 ~~~~~~~l~~g~v~iN~~~~~~~~~~~p~gG~~~SG~--G~--~~g~~~~~~~t~~k~v~~~~~ 453 (493)
+++|++++++|.|+||+++.+ .++.+||--.+-|+ ++ ..|+.|++.+|..|.++....
T Consensus 369 a~~F~~~vda~~V~vNasTrf--~Dg~~~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~g~g 430 (436)
T d1vlua_ 369 AEKFMKGVDSSGVYWNASTRF--ADGFRYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRGDG 430 (436)
T ss_dssp HHHHHHHCCCSEEEESSCGGG--CC----------------------CCSGGGEEEEEEEECSS
T ss_pred HHHHHHhCCceEEEEcCCCcc--CCCCcccCcceeeEecCCCCCCCCcChHHhceEEEEEECCC
Confidence 999999999999999998864 34555552112222 33 369999999999999987763
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=96.12 E-value=0.6 Score=44.30 Aligned_cols=328 Identities=18% Similarity=0.199 Sum_probs=180.6
Q ss_pred CHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCC----chhhhHHHHHHH--------HHHHHHHHHHHHhhcCCccccc
Q 011107 37 SYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKP----ELESSIYEVALL--------KTSIKSALKELKHWMTPEKAKT 104 (493)
Q Consensus 37 ~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~----~~~a~~~ev~~~--------~~~~~~~~~~~~~~~~~~~~~~ 104 (493)
..+...+..+.+.+.++++.|.=....++...+- +.-. ..|+..+ .+-++.+.++++.|...+....
T Consensus 25 ~~~~v~~~V~~Ii~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs-~~Ei~~A~~~l~~el~~AI~~A~~rI~~FH~~Q~~~~ 103 (431)
T d1k75a_ 25 ASESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVS-AEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPP 103 (431)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCSCSBCC-HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred ccHHHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCccccccC-HHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 3444555666777777777776555556654321 1111 1354433 3445666777777765553221
Q ss_pred c-cc-cCCCCceeeeecceEEEEEccCc---hhHHhhhhHHHHHHHhCCE--EEEeCCCCchHHHHHHHHHHhhhcCCCc
Q 011107 105 S-IT-TFPSSAEIVPEPFGVVLIISPWN---YPFLLSLDPVVGAIAAGNA--LVLKPSEVAPASSSLLAKLVGEYMDLSS 177 (493)
Q Consensus 105 ~-~~-~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~~~~AL~aGN~--Vvlkps~~~~~~~~~l~~~l~~alP~g~ 177 (493)
. .. ..+.....++.|+--|++..|.- ||-. ++...+||-.+|.. |++-|+...|.+ |+ .+--.|+
T Consensus 104 ~~~e~~~Gv~~g~~~~PI~~VGlYVPGG~A~ypSs-vLM~aiPAkvAGV~~Ivv~tPp~~~~~~---l~----aa~~~Gv 175 (431)
T d1k75a_ 104 VDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFST-VLMLATPASIAGCKKVVLCSPPPIADEI---LY----AAQLCGV 175 (431)
T ss_dssp EEEEEETTEEEEEEEEECSEEEEECCCSSSCCHHH-HHHHHHHHHHHTCSEEEEEECSSCCHHH---HH----HHHHTTC
T ss_pred ceeeccCCceeeeeeeehhhheeeccCCCccchHH-HHHHHHHHHhcCCCceeEEeCCCCcchH---HH----HHHHcCc
Confidence 1 11 22344567889999999999965 5554 44457899999975 456666555532 11 1111133
Q ss_pred EEEEe-CChHhHHHHH---hC--CCCeEEEeCCHHHHHHHHHHHhccccch-hhhcCCCC--eEEEcCCCCHHHHHHHHH
Q 011107 178 IRVVE-GAVAETSALL---DQ--KWDKICYTGNSRVARIVMAAAAKHLTPV-LLELGGKS--PVVFDSGINLKVACRRMI 248 (493)
Q Consensus 178 v~vv~-g~~~~~~~L~---~~--~v~~v~ftGs~~~g~~i~~~a~~~~~~~-~~elgG~~--p~iV~~daDl~~Aa~~i~ 248 (493)
=.+.. |+.....+|. .. +||+|+=.|+.-+..+=..-.... ..+ +=-..|.+ -+|-++++|.+.++.+++
T Consensus 176 ~~iy~~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~~-~~vgID~~aGPSEv~viAD~~a~p~~iAaDll 254 (431)
T d1k75a_ 176 QDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRL-DGAAIDMPAGPSEVLVIADSGATPDFVASDLL 254 (431)
T ss_dssp CEEEECCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHST-TSCEESCCCCCCEEEEEECTTSCHHHHHHHHH
T ss_pred cceEecCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcccC-CccccccccCCceEEEEecCCCCHHHHHHHHH
Confidence 23333 3444445554 22 499999888875432211111110 001 11123555 345566789999999888
Q ss_pred HhhcccCCCCcccCCCEEEEcCc--chHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCeEEeC
Q 011107 249 MGKWGCNNGQACISPDHIITTKD--YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHG 326 (493)
Q Consensus 249 ~~~~~~~~Gq~C~a~~~v~V~~~--i~d~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~g 326 (493)
.-+= ++.. .+.++|..+ ..+++.+.+.+.+..+. .. +.+....
T Consensus 255 aQAE-H~~~-----a~~ilvt~~~~l~~~v~~~i~~~l~~l~--------------r~-------~i~~~s~-------- 299 (431)
T d1k75a_ 255 SQAE-HGPD-----SQVILLTPAADMARRVAEAVERQLAELP--------------RA-------ETARQAL-------- 299 (431)
T ss_dssp HHHT-TCTT-----CEEEEEESCHHHHHHHHHHHHHHHHTCS--------------SC-------HHHHHHH--------
T ss_pred hccC-Cccc-----ceeEEEeccHHHHHHHHHHHHHHhhhch--------------HH-------HHHHhhh--------
Confidence 8764 3332 234566655 23444434433333221 00 0011000
Q ss_pred CccCCCCceeeceEecCCCCCCcccccccccceeeeEeeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc-ccce
Q 011107 327 GERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV-SAGG 405 (493)
Q Consensus 327 g~~~~~g~~~~Ptvl~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~ 405 (493)
+-.| ++.++|++|+++++|..-. -...|.++|.. .+...+ .+|.
T Consensus 300 ---------------------------~~~~----ii~v~~~~ea~~~~N~~AP-EHL~l~~~~~~---~~~~~i~nAGs 344 (431)
T d1k75a_ 300 ---------------------------NASR----LIVTKDLAQCVEISNQYGP-EHLIIQTRNAR---ELVDSITSAGS 344 (431)
T ss_dssp ---------------------------TTCE----EEECSSHHHHHHHHHHHCC-SEEEEESTTHH---HHGGGCCCCSE
T ss_pred ---------------------------ccce----EEEecCHHHHHHHHHhhhH-HHHHHHhcCHH---HHHhhhhhcch
Confidence 0011 3457999999999998432 34778888876 355555 7899
Q ss_pred EEEcCCCccc-------CCCCCCccCCCCCCCCCcchHHHHHHhhhccEEe
Q 011107 406 LVINDTAVHL-------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 449 (493)
Q Consensus 406 v~iN~~~~~~-------~~~~~p~gG~~~SG~G~~~g~~~~~~~t~~k~v~ 449 (493)
|++..++.-. .++.+|-|| ..|+.+..+...|....++.
T Consensus 345 IflG~~sp~a~GDY~aGpnHvLPT~G-----~Ar~~sgLsv~dF~k~~s~~ 390 (431)
T d1k75a_ 345 VFLGDWSPESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMTVQ 390 (431)
T ss_dssp EEESTTCCHHHHHHTSSSCCCCCCTT-----GGGTCCCCCGGGGEEEEEEE
T ss_pred hhcCCCCcchhhccccCCCccCCCCC-----ceeecCCCCHHHeeeeeeEE
Confidence 9998754321 445566655 45666666778888776654
|