Citrus Sinensis ID: 011120


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490---
MKEFFFYPFNYQKYILFFEKMRKNTSPVAQESDTMTHLDFWKKFKRLNPLEPSLGILGFILVAAIFIGCFFYLDYRTVTRRLHYHDPSWLGLAVPFSSSPSSSSSAAAAAAEEPLGLGVNERPGFLDEGAGLCDVFDGNWVWDDNYPLYRSSDCLFLDEGFRCLENGRPDNFYTKWRWQPKACNLPRFDARNMLQKLRNRRLVFVGDSIGRNQWESLLCMLASAVTNKSSIYEVNGEPITKHKGSLVFLFKDYNCTVEYYRSPFLVVQSRPPAKAPKEVRLTLKVDQLDWSSRKWRDADVLIFNTGHWWNFEKTIREGCYFEERGELKKKMSVETAFEKAIETLIHWIGSQVNMDKTQVLFRTYAPVHFRNGNWNSGGSCHLEKLPDLGPLPAPPGIHFKIVANALLKHRNESQAMNLGLLNVTDMTSRRKDGHSSVYFLGPKRGPAPLHRQDCSHWCLPGVPDSWNELLYALFLKQETSHAQNSAEHPQAPL
cccccccccccccEEEEEEEccccccccccccccccHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcEEEEcccccccccccccccccccccccccccccccccEEEEccccccccccHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEEcccEEEEEEEccEEEEccccccccccccccccccccccHHHHccccccccEEccccccccccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHccccccEEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccc
ccEEEEccccHHHHHHHHHHHcccccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccHHcEEEEcccccccccccHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHcccccEEEEEcccEcEccccEEEEEEEEccEEEEEEEccEEEEcccccccccccccEEEEEcHHHcccHHcccccEEEEEccEEEEccccEcccccccccccEcccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccEEEEEEHHHHHHHHcccccHccccHHcccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccc
mkefffypfnyQKYILFFEKMrkntspvaqesdtmtHLDFWKkfkrlnplepslgILGFILVAAIFIGCFFYldyrtvtrrlhyhdpswlglavpfssspsssssAAAAAaeeplglgvnerpgfldegaglcdvfdgnwvwddnyplyrssdclfldegfrclengrpdnfytkwrwqpkacnlprfDARNMLQKLRNRRLVFVGDSIGRNQWESLLCMLASAvtnkssiyevngepitkhkgsLVFLFKdynctveyyrspflvvqsrppakapkevRLTLKvdqldwssrkwrdaDVLIFNTGHWWNFEKTIREGCYFEERGELKKKMSVETAFEKAIETLIHWIGSQVNMDKTQVLFRTyapvhfrngnwnsggschleklpdlgplpappgihFKIVANALLKHrnesqamnlgllnvtdmtsrrkdghssvyflgpkrgpaplhrqdcshwclpgvpdswNELLYALFLKQetshaqnsaehpqapl
MKEFFFYPFNYQKYILFFEKMRKNTSPVAQESDTMTHLDFWKKFKRLNPLEPSLGILGFILVAAIFIGCFFYLDYRTVTRRLHYHDPSWLGLAVPFSSSPSSSSSAAAAAAEEPLGLGVNERPGFLDEGAGLCDVFDGNWVWDDNYPLYRSSDCLFLDEGFRCLENGRpdnfytkwrwqpkacnlpRFDARNMLQKLRNRRLVFVGDSIGRNQWESLLCMLASAVTNKSSIYEVNgepitkhkgslVFLFKDYNCTVEYYRSPflvvqsrppakapkevrltlkvdqldwssrkwrdADVLIFntghwwnfekTIREGCYFEERGELKKKMSVETAFEKAIETLIHWIGSQVNMDKTQVLFRTYAPVHFRNGNWNSGGSCHLEKLPDLGPLPAPPGIHFKIVANALLKHRNESQAMNLGLLNVTDMTSRRKDGHSSVYFLGPKRGPAPLHRQDCSHWCLPGVPDSWNELLYALFLKQETshaqnsaehpqapl
MKEFFFYPFNYQKYILFFEKMRKNTSPVAQESDTMTHLDFWKKFKRLNPLEPSLGILGFILVAAIFIGCFFYLDYRTVTRRLHYHDPSWLGLAVPFssspsssssaaaaaaEEPLGLGVNERPGFLDEGAGLCDVFDGNWVWDDNYPLYRSSDCLFLDEGFRCLENGRPDNFYTKWRWQPKACNLPRFDARNMLQKLRNRRLVFVGDSIGRNQWESLLCMLASAVTNKSSIYEVNGEPITKHKGSLVFLFKDYNCTVEYYRSPFLVVQSRPPAKAPKEVRLTLKVDQLDWSSRKWRDADVLIFNTGHWWNFEKTIREGCYFEERGELKKKMSVETAFEKAIETLIHWIGSQVNMDKTQVLFRTYAPVHFRNGNWNSGGSCHLEKlpdlgplpappgIHFKIVANALLKHRNESQAMNLGLLNVTDMTSRRKDGHSSVYFLGPKRGPAPLHRQDCSHWCLPGVPDSWNELLYALFLKQETSHAQNSAEHPQAPL
***FFFYPFNYQKYILFFEKMR***********TMTHLDFWKKFKRLNPLEPSLGILGFILVAAIFIGCFFYLDYRTVTRRLHYHDPSWLGLAVP***********************VNERPGFLDEGAGLCDVFDGNWVWDDNYPLYRSSDCLFLDEGFRCLENGRPDNFYTKWRWQPKACNLPRFDARNMLQKLRNRRLVFVGDSIGRNQWESLLCMLASAVTNKSSIYEVNGEPITKHKGSLVFLFKDYNCTVEYYRSPFLVVQS********EVRLTLKVDQLDWSSRKWRDADVLIFNTGHWWNFEKTIREGCYFEERGELKKKMSVETAFEKAIETLIHWIGSQVNMDKTQVLFRTYAPVHFRNGNWNSGGSCHLEKLPDLGPLPAPPGIHFKIVANALLKHRNESQAMNLGLLNVT************VYFLGPKRGPAPLHRQDCSHWCLPGVPDSWNELLYALFLK*****************
*KEFFFYPFNYQKYILFF******************************PLEPSLGILGFILVAAIFIGCFFYLDYRTVTRR****************************************************DVFDGNWVWDDNYPLYRSSDCLFLDEGFRCLENGRPDNFYTKWRWQPKACNLPRFDARNMLQKLRNRRLVFVGDSIGRNQWESLLCMLASAVTNKSSIYEVNGEPITKHKGSLVFLFKDYNCTVEYYRSPFLVVQSRPPAKAPKEVRLTLKVDQLDWSSRKWRDADVLIFNTGHWWNFEKTIREGCYFEERGELKKKMSVETAFEKAIETLIHWIGSQVNMDKTQVLFRTYAPVHFRNGNWNSGGSCHLEKLPDLGPLPAPPGIHFKIVANALLKHRNESQAMNLGLLNVTDMTSRRKDGHSSVYF*********LHRQDCSHWCLPGVPDSWNELLY**********************
MKEFFFYPFNYQKYILFFEKMRKN*********TMTHLDFWKKFKRLNPLEPSLGILGFILVAAIFIGCFFYLDYRTVTRRLHYHDPSWLGLAVP*****************EPLGLGVNERPGFLDEGAGLCDVFDGNWVWDDNYPLYRSSDCLFLDEGFRCLENGRPDNFYTKWRWQPKACNLPRFDARNMLQKLRNRRLVFVGDSIGRNQWESLLCMLASAVTNKSSIYEVNGEPITKHKGSLVFLFKDYNCTVEYYRSPFLVVQSRPPAKAPKEVRLTLKVDQLDWSSRKWRDADVLIFNTGHWWNFEKTIREGCYFEERGELKKKMSVETAFEKAIETLIHWIGSQVNMDKTQVLFRTYAPVHFRNGNWNSGGSCHLEKLPDLGPLPAPPGIHFKIVANALLKHRNESQAMNLGLLNVTDMTSRRKDGHSSVYFLGPKRGPAPLHRQDCSHWCLPGVPDSWNELLYALFLKQET**************
MKEFFFYPFNYQKYILFFEKMRK**********TMTHLDFWKKFKRLNPLEPSLGILGFILVAAIFIGCFFYLDYRTVTRR**************************************************LCDVFDGNWVWDDNYPLYRSSDCLFLDEGFRCLENGRPDNFYTKWRWQPKACNLPRFDARNMLQKLRNRRLVFVGDSIGRNQWESLLCMLASAVTNKSSIYEVNGEPITKHKGSLVFLFKDYNCTVEYYRSPFLVVQSRPPAKAPKEVRLTLKVDQLDWSSRKWRDADVLIFNTGHWWNFEKTIREGCYFEERGELKKKMSVETAFEKAIETLIHWIGSQVNMDKTQVLFRTYAPVHFRNGNWNSGGSCHLEKLPDLGPLPAPPGIHFKIVANALLKHRNESQAMNLGLLNVTDMTSRRKDGHSSVYFLGPKRGPAPLHRQDCSHWCLPGVPDSWNELLYALFLKQ****************
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MKEFFFYPFNYQKYILFFEKMRKNTSPVAQESDTMTHLDFWKKFKRLNPLEPSLGILGFILVAAIFIGCFFYLDYRTVTRRLHYHDPSWLGLAVPFSSSPSSSSSAAAAAAEEPLGLGVNERPGFLDEGAGLCDVFDGNWVWDDNYPLYRSSDCLFLDEGFRCLENGRPDNFYTKWRWQPKACNLPRFDARNMLQKLRNRRLVFVGDSIGRNQWESLLCMLASAVTNKSSIYEVNGEPITKHKGSLVFLFKDYNCTVEYYRSPFLVVQSRPPAKAPKEVRLTLKVDQLDWSSRKWRDADVLIFNTGHWWNFEKTIREGCYFEERGELKKKMSVETAFEKAIETLIHWIGSQVNMDKTQVLFRTYAPVHFRNGNWNSGGSCHLEKLPDLGPLPAPPGIHFKIVANALLKHRNESQAMNLGLLNVTDMTSRRKDGHSSVYFLGPKRGPAPLHRQDCSHWCLPGVPDSWNELLYALFLKQETSHAQNSAEHPQAPL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query493
255559482466 conserved hypothetical protein [Ricinus 0.929 0.982 0.678 0.0
224066517515 predicted protein [Populus trichocarpa] 0.920 0.881 0.612 0.0
225436992460 PREDICTED: uncharacterized protein LOC10 0.886 0.95 0.647 1e-174
147772655463 hypothetical protein VITISV_010155 [Viti 0.892 0.950 0.645 1e-174
356570566461 PREDICTED: uncharacterized protein LOC10 0.924 0.989 0.606 1e-169
296086732419 unnamed protein product [Vitis vinifera] 0.809 0.952 0.610 1e-164
255552277453 conserved hypothetical protein [Ricinus 0.896 0.975 0.597 1e-164
356503533459 PREDICTED: uncharacterized protein LOC10 0.892 0.958 0.596 1e-163
356572174452 PREDICTED: uncharacterized protein LOC10 0.910 0.993 0.579 1e-162
225432554446 PREDICTED: uncharacterized protein LOC10 0.890 0.984 0.6 1e-162
>gi|255559482|ref|XP_002520761.1| conserved hypothetical protein [Ricinus communis] gi|223540146|gb|EEF41723.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  660 bits (1703), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/470 (67%), Positives = 383/470 (81%), Gaps = 12/470 (2%)

Query: 24  NTSPVAQESDTMTHLDFWKKFKRLNPLEPSLGILGFILVAAIFIGCFFYLDYRTVTRRLH 83
           NTSP  Q+ DTMTH DF+KKFKRLNPLEPSLGILGF LVA +FIGCFFYLDYR+VT  + 
Sbjct: 9   NTSP--QDQDTMTHFDFFKKFKRLNPLEPSLGILGFFLVAILFIGCFFYLDYRSVTGGMP 66

Query: 84  YHDPSWLGLAVPFSSSPSSSSSAAAAAAEEPLGLGVNERPGFLDEGAGLCDVFDGNWVWD 143
           +   SWLGL +    +PSSSSS++       LG   N RPGFLD+    CDVFDGNWVWD
Sbjct: 67  FRGFSWLGLGL---VTPSSSSSSSVVE----LG-SDNGRPGFLDKLGDGCDVFDGNWVWD 118

Query: 144 DNYPLYRSSDCLFLDEGFRCLENGRPDNFYTKWRWQPKACNLPRFDARNMLQKLRNRRLV 203
           D+YPLY+S +C F+D GFRCLENGRPD+FYTKWRWQP  C+LPRFD + ML++LRN RLV
Sbjct: 119 DSYPLYQSKNCSFIDSGFRCLENGRPDSFYTKWRWQPNHCDLPRFDPKLMLERLRNHRLV 178

Query: 204 FVGDSIGRNQWESLLCMLASAVTNKSSIYEVNGEPITKHKGSLVFLFKDYNCTVEYYRSP 263
           FVGDS+GRNQWESLLCMLA+A+ + SSIYEVNG PITKH+G L F+FKDYNCTVEYYR+P
Sbjct: 179 FVGDSVGRNQWESLLCMLATAIPDNSSIYEVNGSPITKHRGFLAFMFKDYNCTVEYYRAP 238

Query: 264 FLVVQSRPPAKAPKEVRLTLKVDQLDWSSRKWRDADVLIFNTGHWWNFEKTIREGCYFEE 323
           FL+ Q RPPA AP +V++TL++D+LDW+S +W +ADVLIFN+GHWWN+EKTIR GCYF+E
Sbjct: 239 FLLYQGRPPAGAPAKVKMTLRLDKLDWTSPQWINADVLIFNSGHWWNYEKTIRGGCYFQE 298

Query: 324 RGELKKKMSVETAFEKAIETLIHWIGSQVNMDKTQVLFRTYAPVHFRNGNWNSGGSCHLE 383
             E+K +M+VETA+ ++++TLI W+ S +N  KTQV FRTYAPVHFR G+W +GGSCHLE
Sbjct: 299 GEEVKMEMTVETAYRRSLQTLIDWMDSNINTSKTQVFFRTYAPVHFRGGDWKTGGSCHLE 358

Query: 384 KLPDLGPLPAPPGIHFKIVANALLKHRNESQAMNLGLLNVTDMTSRRKDGHSSVYFLGPK 443
           KLPDLG +P+     FKI  + +LK  NES  +NL LLNVT+M +RRKDGH+SVY+L P+
Sbjct: 359 KLPDLGSMPSSSDYRFKIFFD-MLKQSNESH-LNLELLNVTNMAARRKDGHASVYYLEPE 416

Query: 444 RGPAPLHRQDCSHWCLPGVPDSWNELLYALFLKQETSHAQNSAEHPQAPL 493
            GPA LHRQDCSHWCLPGVPDSWNELLYAL LK+E +HAQNS E  QAPL
Sbjct: 417 IGPASLHRQDCSHWCLPGVPDSWNELLYALLLKKEAAHAQNSTESSQAPL 466




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066517|ref|XP_002302119.1| predicted protein [Populus trichocarpa] gi|222843845|gb|EEE81392.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225436992|ref|XP_002272356.1| PREDICTED: uncharacterized protein LOC100249456 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147772655|emb|CAN62851.1| hypothetical protein VITISV_010155 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356570566|ref|XP_003553456.1| PREDICTED: uncharacterized protein LOC100779356 [Glycine max] Back     alignment and taxonomy information
>gi|296086732|emb|CBI32367.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255552277|ref|XP_002517183.1| conserved hypothetical protein [Ricinus communis] gi|223543818|gb|EEF45346.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|356503533|ref|XP_003520562.1| PREDICTED: uncharacterized protein LOC100801125 [Glycine max] Back     alignment and taxonomy information
>gi|356572174|ref|XP_003554245.1| PREDICTED: uncharacterized protein LOC100780433 [Glycine max] Back     alignment and taxonomy information
>gi|225432554|ref|XP_002280710.1| PREDICTED: uncharacterized protein LOC100261302 [Vitis vinifera] gi|297736996|emb|CBI26197.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query493
TAIR|locus:2080389469 TBL10 "TRICHOME BIREFRINGENCE- 0.922 0.970 0.538 2.1e-141
TAIR|locus:2182157464 TBL11 "TRICHOME BIREFRINGENCE- 0.912 0.969 0.544 1.5e-140
TAIR|locus:2080767427 TBL8 "AT3G11570" [Arabidopsis 0.687 0.793 0.502 3.3e-95
TAIR|locus:2149947485 TBL5 "AT5G20590" [Arabidopsis 0.693 0.705 0.455 8.5e-81
TAIR|locus:2096094475 TBL6 "AT3G62390" [Arabidopsis 0.669 0.694 0.452 2.2e-80
TAIR|locus:2088659556 TBL1 "AT3G12060" [Arabidopsis 0.683 0.606 0.426 5.4e-79
TAIR|locus:2170184608 TBR [Arabidopsis thaliana (tax 0.699 0.567 0.431 1.8e-78
TAIR|locus:2036631541 TBL2 "AT1G60790" [Arabidopsis 0.687 0.626 0.408 3.4e-77
TAIR|locus:2155874457 TBL4 "AT5G49340" [Arabidopsis 0.683 0.737 0.415 9.3e-75
TAIR|locus:2028533445 TBL7 "AT1G48880" [Arabidopsis 0.608 0.674 0.454 8.6e-72
TAIR|locus:2080389 TBL10 "TRICHOME BIREFRINGENCE-LIKE 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1383 (491.9 bits), Expect = 2.1e-141, P = 2.1e-141
 Identities = 253/470 (53%), Positives = 329/470 (70%)

Query:    21 MRKNTSPVAQESDTMTHLDFWKKFKRLNPL-EPSLGILGFILVAAIFIGCFFYLDYRTVT 79
             M KN++ V +        +  ++FKR   + EPSLG+LGF LV    +  FF+ DYR+V 
Sbjct:     1 MSKNSN-VEENGGAKPICEALRRFKRSRLVFEPSLGVLGFFLVGVCLVCSFFFFDYRSVA 59

Query:    80 RRLHYHDPSWLGLAVPFXXXXXXXXXXXXXXXEEPLGLGVNERPGFLDEGAGLCDVFDGN 139
             +     D S   + + F                       ++R GFL+E    CDVFDG+
Sbjct:    60 KSYGLSDKSERFVWLKFDNISSSSSSSSNS----------SKRVGFLEESGSGCDVFDGD 109

Query:   140 WVWDDNYPLYRSSDCLFLDEGFRCLENGRPDNFYTKWRWQPKACNLPRFDARNMLQKLRN 199
             WVWD++YPLY+S DC FLDEGFRC + GR D FYT+WRWQP+ CNLPRFDA+ ML+KLR+
Sbjct:   110 WVWDESYPLYQSKDCRFLDEGFRCSDFGRSDLFYTQWRWQPRHCNLPRFDAKLMLEKLRD 169

Query:   200 RRLVFVGDSIGRNQWESLLCMLASAVTNKSSIYEVNGEPITKHKGSLVFLFKDYNCTVEY 259
             +RLVFVGDSIGRNQWESLLC+L+SAV N+S IYE+NG PITKHKG LVF F++YNCTVEY
Sbjct:   170 KRLVFVGDSIGRNQWESLLCLLSSAVKNESLIYEINGSPITKHKGFLVFKFEEYNCTVEY 229

Query:   260 YRSPFLVVQSRPPAKAPKEVRLTLKVDQLDWSSRKWRDADVLIFNTGHWWNFEKTIREGC 319
             YRSPFLV QSRPP  +P +V+ +LK+D +DW+S KWRDADVL+ NTGHWWN  KT R GC
Sbjct:   230 YRSPFLVPQSRPPIGSPGKVKTSLKLDTMDWTSSKWRDADVLVLNTGHWWNEGKTTRTGC 289

Query:   320 YFEERGELKKKMSVETAFEKAIETLIHWIGSQVNMDKTQVLFRTYAPVHFRNGNWNSGGS 379
             YF+E  E+K KM+V+ A+++A+ T++ WI ++++ +KTQV FRT+APVHFR G+W +GG+
Sbjct:   290 YFQEGEEVKLKMNVDDAYKRALNTVVKWIHTELDSNKTQVFFRTFAPVHFRGGDWKTGGT 349

Query:   380 CHLEKXXXXXXXXXXXXI--HFKIVANALLKHRNESQAMNLGLLNVTDMTSRRKDGHSSV 437
             CH+E                  KI+ + L  + N S+ + + LLN+T M ++RKDGH S+
Sbjct:   350 CHMETLPEIGTSLASSETWEQLKILRDVLSHNSNRSETVKVKLLNITAMAAQRKDGHPSL 409

Query:   438 YFLGPKRGPAPLHRQDCSHWCLPGVPDSWNELLYALFLKQETSHAQNSAE 487
             Y+LGP  GPAPLHRQDCSHWCLPGVPD+WNEL YALF+KQE   +    E
Sbjct:   410 YYLGP-HGPAPLHRQDCSHWCLPGVPDTWNELFYALFMKQEAPSSSKRVE 458




GO:0005634 "nucleus" evidence=ISM
GO:0007623 "circadian rhythm" evidence=IEP
TAIR|locus:2182157 TBL11 "TRICHOME BIREFRINGENCE-LIKE 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080767 TBL8 "AT3G11570" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149947 TBL5 "AT5G20590" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096094 TBL6 "AT3G62390" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2088659 TBL1 "AT3G12060" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170184 TBR [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2036631 TBL2 "AT1G60790" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2155874 TBL4 "AT5G49340" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028533 TBL7 "AT1G48880" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query493
pfam13839270 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera 1e-103
PLN02629387 PLN02629, PLN02629, powdery mildew resistance 5 3e-88
pfam1441655 pfam14416, PMR5N, PMR5 N terminal Domain 2e-26
>gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
 Score =  309 bits (793), Expect = e-103
 Identities = 124/292 (42%), Positives = 166/292 (56%), Gaps = 24/292 (8%)

Query: 185 LPRFDARNMLQKLRNRRLVFVGDSIGRNQWESLLCMLASAVTNKSSIYEVNGEPITKHKG 244
           LPRFDA+  L++LR +R+VFVGDS+ RNQWESL+C+L+     K    E +G        
Sbjct: 1   LPRFDAQQFLERLRGKRVVFVGDSLSRNQWESLVCLLSQVEPPKGKTLERDG-------R 53

Query: 245 SLVFLFKDYNCTVEYYRSPFLVVQSRPPAKAPKEVRLTLKVDQLD-WSSRKWRDADVLIF 303
              F FKDYN T+E+Y SPFLV          +E +  LK+D +D   S+ W  ADVL+F
Sbjct: 54  LFRFRFKDYNVTIEFYWSPFLVES-----DNAEEGKRVLKLDSIDEKWSKLWPGADVLVF 108

Query: 304 NTGHWWNFEKTIREGCYFEERGELKKKMSVETAFEKAIETLIHWIGSQVNMDKTQVLFRT 363
           N+GHWW   K      Y ++     K+M    A+ KA+ET   W+   +   KT+V FRT
Sbjct: 109 NSGHWWLHRKVYIGWDYCQKSNY--KEMGFLDAYRKALETWAKWVDVNLPPSKTRVFFRT 166

Query: 364 YAPVHFRNGNWNSGGSCHLEKLPDLGP-LPAPPGIHFKIVANALLKHRNESQAMNLGLLN 422
           ++PVHF  G WN+GGSC+ E  P LG            IV   L +   ++    + LL+
Sbjct: 167 FSPVHFEGGEWNTGGSCY-ETEPLLGSEYKGLTPEMIDIVNEVLSRAAMKT---PVKLLD 222

Query: 423 VTDMTSRRKDGHSSVYFLGPKRGPAPLHRQDCSHWCLPGVPDSWNELLYALF 474
           +T ++  RKDGH SVY    ++   P   QDC HWCLPGVPD+WNELL AL 
Sbjct: 223 ITLLSQYRKDGHPSVY----RKPGPPKKEQDCLHWCLPGVPDTWNELLLALL 270


The PC-Esterase family is comprised of Cas1p, the Homo sapiens C7orf58, Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1, animal FAM55D proteins, and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain, in addition, with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain. Length = 270

>gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 Back     alignment and domain information
>gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 493
PLN02629387 powdery mildew resistance 5 100.0
PF13839263 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f 100.0
PF1441655 PMR5N: PMR5 N terminal Domain 99.94
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 97.96
cd01827188 sialate_O-acetylesterase_like1 sialate O-acetylest 81.14
>PLN02629 powdery mildew resistance 5 Back     alignment and domain information
Probab=100.00  E-value=7.6e-114  Score=891.66  Aligned_cols=333  Identities=38%  Similarity=0.799  Sum_probs=294.4

Q ss_pred             CCCCCCCCCcCcccceeeCCCCCCcCCCCCC-CccccccccccCCCCCccceeeeecCCCCCCCCCHHHHHHHhcCCcEE
Q 011120          125 FLDEGAGLCDVFDGNWVWDDNYPLYRSSDCL-FLDEGFRCLENGRPDNFYTKWRWQPKACNLPRFDARNMLQKLRNRRLV  203 (493)
Q Consensus       125 ~~~~~~~~CD~f~G~WV~D~~~PlY~~~~Cp-~i~~~~~C~~nGRpD~~Y~~WRWQP~gC~LprFD~~~fLe~LRgKrl~  203 (493)
                      .++.+.+.||+|+|+||+|+++|+|++++|| ||+++|||++|||||++|++|||||++|+||||||.+||++|||||||
T Consensus        45 ~~~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~  124 (387)
T PLN02629         45 SLQANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVM  124 (387)
T ss_pred             CCCCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEE
Confidence            3555678899999999999999999999999 999999999999999999999999999999999999999999999999


Q ss_pred             EEechhhHHHHHHHHHhhhhccCCCceeEeecCCcccccCCeEEEEEeecceEEEEEEcccccccCCCCCCCCCcceEEE
Q 011120          204 FVGDSIGRNQWESLLCMLASAVTNKSSIYEVNGEPITKHKGSLVFLFKDYNCTVEYYRSPFLVVQSRPPAKAPKEVRLTL  283 (493)
Q Consensus       204 FVGDSl~Rnq~eSLlCLL~~~~~~~~~~~~~~g~~i~k~~g~~~~~F~~~N~TV~~yWSPFLV~~~~~~~~~~~~~~~~L  283 (493)
                      ||||||+|||||||+|||++++++..+.+.       +..++++|+|++||+||+||||||||+.+...      ..+.|
T Consensus       125 FVGDSL~RNQ~eSLvClL~~~~p~~~~~~~-------~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~------~~~~l  191 (387)
T PLN02629        125 FVGDSLGRNQWESLICLISSSVPSTRTQMS-------RGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQ------GKRVL  191 (387)
T ss_pred             EeccccchhHHHHHHHHhhccCCCCceeee-------cCCceEEEEeccCCEEEEEEecceEEeeecCC------CceeE
Confidence            999999999999999999999886543222       22345799999999999999999999875422      23679


Q ss_pred             eecccccccccCCCccEEEEecccccccccccccccccccCCccccccCHHHHHHHHHHHHHHHHHhccCCCCceEEEEe
Q 011120          284 KVDQLDWSSRKWRDADVLIFNTGHWWNFEKTIREGCYFEERGELKKKMSVETAFEKAIETLIHWIGSQVNMDKTQVLFRT  363 (493)
Q Consensus       284 ~lD~idw~~~~w~~~DvLV~NtGhWw~r~~~~~~~~y~~~G~~v~~~~~~~~Ayr~alrt~~~wi~~~~~~~k~~VffRT  363 (493)
                      +||++|..++.|+++|||||||||||.+.+..++++|++.|..++++|++.+||++||+||++||++++++.+++|||||
T Consensus       192 ~LD~id~~a~~w~~~DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT  271 (387)
T PLN02629        192 KLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQS  271 (387)
T ss_pred             EecCcchhhhhhccCCEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEe
Confidence            99999965678999999999999999998888888999999888899999999999999999999999998899999999


Q ss_pred             cCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCc-hHHHHHHHHHHhhhhcccCcceEEEeccccccCCCCCCCCC
Q 011120          364 YAPVHFRNGNWNSGG-----SCHLEKLPDLGPLPAPPG-IHFKIVANALLKHRNESQAMNLGLLNVTDMTSRRKDGHSSV  437 (493)
Q Consensus       364 ~SP~HFegg~Wn~GG-----~C~~~t~P~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~lLDIT~lS~~R~DgHps~  437 (493)
                      +||+||+||+||+||     +|.++|.|+.++.+..+. .+++++++++++     ++.+|+|||||+||++|||||||+
T Consensus       272 ~SP~Hfe~g~Wn~gg~~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~-----~~~~v~lLDIT~ls~lR~DgHPs~  346 (387)
T PLN02629        272 ISPTHYNPSEWSAGASTTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRG-----MHNPAYLLDITLLSELRKDGHPSI  346 (387)
T ss_pred             cCcccccCCCcCCCCCCCCCCCccCCccCcCccccCcchHHHHHHHHHHHh-----cCCceEEEechhhhhcCCCCCccc
Confidence            999999999999875     588899998876554333 566777777754     358999999999999999999999


Q ss_pred             ccCC--CCCCCCCCCCCCcccccCCCCchHHHHHHHHHHh
Q 011120          438 YFLG--PKRGPAPLHRQDCSHWCLPGVPDSWNELLYALFL  475 (493)
Q Consensus       438 y~~~--~~~~~~~~~~~DClHWCLPGvpDtWNelL~a~L~  475 (493)
                      |+..  ++++.++..++||+||||||||||||||||++|+
T Consensus       347 Y~~~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~  386 (387)
T PLN02629        347 YSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF  386 (387)
T ss_pred             ccCCCchhhccCCCCCCCcccccCCCCCccHHHHHHHHHh
Confidence            9632  2334567788999999999999999999999987



>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>PF14416 PMR5N: PMR5 N terminal Domain Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query493
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 96.1
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: BT2961-like
domain: Uncharacterized protein Lp3323
species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.10  E-value=0.02  Score=49.18  Aligned_cols=15  Identities=33%  Similarity=0.554  Sum_probs=12.7

Q ss_pred             hcCCcEEEEechhhH
Q 011120          197 LRNRRLVFVGDSIGR  211 (493)
Q Consensus       197 LRgKrl~FVGDSl~R  211 (493)
                      +..|||+|+|||++-
T Consensus         2 ~~~kri~~iGDSit~   16 (207)
T d3dc7a1           2 VSFKRPAWLGDSITA   16 (207)
T ss_dssp             BCCSSEEEEESTTTS
T ss_pred             CCCCEEEEEehHhhc
Confidence            357999999999984