Citrus Sinensis ID: 011152

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490--
MSEKGILPSRFLFCLITISMFLLIISSSFLLQFSSTSFIPRSVFKLILLNSTSVFLKANVENEPMKLPFMSSKDSQTATGTSSNSNSGNRMAGSFGRQKGKKCDPGQVLLRVYMYDLPPEFHFGLLGWKGKPNQTWPDVSKQSRIWPYPGGLNLQHSIEYWLTLDLLSSNIANIGRPCTTIRVMNSSLADVIFVPFFSSLSYNRYSKLRGKEKISVNKMLQRKLVQFLMNQDGWKRLGGKDHLIVAHHPNSMLDARRQLGSAMFVLADFGRYPVEIANVEKDIIAPYMHLVRTIPGGESPPFDQRPTLAYFQGAIYRKDGGVIRQELYYLLKDEKDVHFTFGSIQGDGVKNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGFLLNLLRGIKQEQWTKMWERLKEVVQHFEYQYPSQPGDAVDMIWEAVSRKVPSVRFKIHKSNRYIKSHHPVNSN
cccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHcccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccEEEEcccccccHHHccccccccHHHHHHHHHHHHHHHHHcccccHHcccccEEEEcccccccHHHHHHHcccEEEEEccccccEEEcccccccccccccccccccccccccccccccEEEEEccccccccccHHHHHHHHHccccccEEEEccccccccccHHHHcccccEEEEEccccccccHHHHHHHcccEEEEEEcccccccccccccccEEEEEcccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHcEEccccccccHHHHHHHHHHHHcccccccccccccccccccccccc
ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHccccccccccccccccccccccccccEEEEEEcccHHHcHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccEEEEccHHHccEEEEEEEccccEcEcccccccccccHHHHHHHHHHHHHHcccHHHccccccEEEEEcccccHHHHHHHHHccEEEEcccccccccEEcccccEEccccccccccccccccccccccEEEEEccccccccccccHHHHHHHHHcccccEEEEcccccccHHHHHHHHcccEEEEcccccccccHHHHHHHHHccccEEEEcccccccHcccccccEEEEEEHHHcccccHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHcHHHHHHHHccccEEEcccEcccc
msekgilpsrfLFCLITISMFLLIISSSFllqfsstsfiprsVFKLILLNSTSVFLKanvenepmklpfmsskdsqtatgtssnsnsgnrmagsfgrqkgkkcdpgqVLLRVYMydlppefhfgllgwkgkpnqtwpdvskqsriwpypgglnlqHSIEYWLTLDLLSsnianigrpctTIRVMNSSLADvifvpffsslsynrysklrgkekISVNKMLQRKLVQFLMNQdgwkrlggkdhlivahhpnsMLDARRQLGSAMFVLadfgrypveiANVEKDIIAPYMhlvrtipggesppfdqrptlayfqgaiyrkdggVIRQELYYLLKDekdvhftfgsiqgdgvknagqgmasskfclniagdtpssnrLFDAIashcvpviisdeielpfedvldySEFCITVHSTDAIKKGFLLNLLRGIKQEQWTKMWERLKEVVQHFeyqypsqpgdaVDMIWEAVSrkvpsvrfkihksnryikshhpvnsn
msekgilpsRFLFCLITISMFLLIISSSFLLQFSSTSFIPRSVFKLILLNSTSVFLKANVENEPMKlpfmsskdsqtatgtssnsnsgnrmagsfgrqkgkkcDPGQVLLRVYMYDLPPEFHFGLLGWKGKPNQTWPDVSKQSRIWPYPGGLNLQHSIEYWLTLDLLSSNIANIGRPCTTIRVMNSSLADVIFVPFFSSLSYNRYSKLRGKEKISVNKMLQRKLVQFLMNQDGWKRLGGKDHLIVAHHPNSMLDARRQLGSAMFVLADFGRYPVEIANVEKDIIAPYMHLVRTIPGGESPPFDQRPTLAYFQGAIYRKDGGVIRQELYYLLKDEKDVHFTFGSIQGDGVKNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGFLLNLLRGIKQEQWTKMWERLKEVVQHFEYQYPSQPGDAVDMIWEAVSRKVpsvrfkihksnryikshhpvnsn
MSEKGILPSRFLFClitismflliisssfllqfsstsfiPRSVFKLILLNSTSVFLKANVENEPMKLPFMSSKDSQTAtgtssnsnsgnRMAGSFGRQKGKKCDPGQVLLRVYMYDLPPEFHFGLLGWKGKPNQTWPDVSKQSRIWPYPGGLNLQHSIEYWLTLDLLSSNIANIGRPCTTIRVMNSSLADVIFVPFFSSLSYNRYSKLRGKEKISVNKMLQRKLVQFLMNQDGWKRLGGKDHLIVAHHPNSMLDARRQLGSAMFVLADFGRYPVEIANVEKDIIAPYMHLVRTIPGGESPPFDQRPTLAYFQGAIYRKDGGVIRQELYYLLKDEKDVHFTFGSIQGDGVKNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGFLLNLLRGIKQEQWTKMWERLKEVVQHFEYQYPSQPGDAVDMIWEAVSRKVPSVRFKIHKSNRYIKSHHPVNSN
*****ILPSRFLFCLITISMFLLIISSSFLLQFSSTSFIPRSVFKLILLNSTSVFLKANV********************************************PGQVLLRVYMYDLPPEFHFGLLGWKGKPNQTWPDVSKQSRIWPYPGGLNLQHSIEYWLTLDLLSSNIANIGRPCTTIRVMNSSLADVIFVPFFSSLSYNRYSKLRGKEKISVNKMLQRKLVQFLMNQDGWKRLGGKDHLIVAHHPNSMLDARRQLGSAMFVLADFGRYPVEIANVEKDIIAPYMHLVRTIPGGE**PFDQRPTLAYFQGAIYRKDGGVIRQELYYLLKDEKDVHFTFGSIQGDGVKNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGFLLNLLRGIKQEQWTKMWERLKEVVQHFEYQYPSQPGDAVDMIWEAVSRKVPSVRFKIHK**************
**********FLFCLITISMFLLIISSSFLLQFSSTSFIPRSVFKLILLN*********************************************************VLLRVYMYDLPPEFHFGLLGWKGKPNQTWPDVSKQSRIWPYPGGLNLQHSIEYWLTLDLLSSNIANIGRPCTTIRVMNSSLADVIFVPFFSSLSYNRYSKLRGKEKISVNKMLQRKLVQFLMNQDGWKRLGGKDHLIVAHHPNSMLDARRQLGSAMFVLADFGRYPVEIANVEKDIIAPYMHLVRTIPGGESPPFDQRPTLAYFQGAIYRKDGGVIRQELYYLLKDEKDVHFTFGSIQGDGVKNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGFLLNLLRGIKQEQWTKMWERLKEVVQHFEYQYPSQPGDAVDMIWEAVSRKVPSVRFKIHK**************
MSEKGILPSRFLFCLITISMFLLIISSSFLLQFSSTSFIPRSVFKLILLNSTSVFLKANVENEPMKLPFM*******************************KCDPGQVLLRVYMYDLPPEFHFGLLGWKGKPNQTWPDVSKQSRIWPYPGGLNLQHSIEYWLTLDLLSSNIANIGRPCTTIRVMNSSLADVIFVPFFSSLSYNRYSKLRGKEKISVNKMLQRKLVQFLMNQDGWKRLGGKDHLIVAHHPNSMLDARRQLGSAMFVLADFGRYPVEIANVEKDIIAPYMHLVRTIPGGESPPFDQRPTLAYFQGAIYRKDGGVIRQELYYLLKDEKDVHFTFGSIQGDGVKNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGFLLNLLRGIKQEQWTKMWERLKEVVQHFEYQYPSQPGDAVDMIWEAVSRKVPSVRFKIHKSNRYIK********
*****ILPSRFLFCLITISMFLLIISSSFLLQFSS*******************************************************************CDPGQVLLRVYMYDLPPEFHFGLLGWKGKPNQTWPDVSKQSRIWPYPGGLNLQHSIEYWLTLDLLSSNIANIGRPCTTIRVMNSSLADVIFVPFFSSLSYNRYSKLRGKEKISVNKMLQRKLVQFLMNQDGWKRLGGKDHLIVAHHPNSMLDARRQLGSAMFVLADFGRYPVEIANVEKDIIAPYMHLVRTIPGGESPPFDQRPTLAYFQGAIYRKDGGVIRQELYYLLKDEKDVHFTFGSIQGDGVKNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGFLLNLLRGIKQEQWTKMWERLKEVVQHFEYQYPSQPGDAVDMIWEAVSRKVPSVRFKIHKSNRYIKS*H*****
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSEKGILPSRFLFCLITISMFLLIISSSFLLQFSSTSFIPRSVFKLILLNSTSVFLKANVENEPMKLPFMSSKDSQTATGTSSNSNSGNRMAGSFGRQKGKKCDPGQVLLRVYMYDLPPEFHFGLLGWKGKPNQTWPDVSKQSRIWPYPGGLNLQHSIEYWLTLDLLSSNIANIGRPCTTIRVMNSSLADVIFVPFFSSLSYNRYSKLRGKEKISVNKMLQRKLVQFLMNQDGWKRLGGKDHLIVAHHPNSMLDARRQLGSAMFVLADFGRYPVEIANVEKDIIAPYMHLVRTIPGGESPPFDQRPTLAYFQGAIYRKDGGVIRQELYYLLKDEKDVHFTFGSIQGDGVKNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKGFLLNLLRGIKQEQWTKMWERLKEVVQHFEYQYPSQPGDAVDMIWEAVSRKVPSVRFKIHKSNRYIKSHHPVNSN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query492 2.2.26 [Sep-21-2011]
Q94AA9500 Xylogalacturonan beta-1,3 no no 0.538 0.53 0.271 3e-17
Q3EAR7470 Probable glycosyltransfer no no 0.550 0.576 0.266 1e-16
Q3E9A4466 Probable glycosyltransfer no no 0.426 0.450 0.321 4e-16
Q33AH8417 Probable glucuronosyltran no no 0.703 0.829 0.249 4e-16
Q9FFN2518 Probable glycosyltransfer no no 0.554 0.527 0.264 7e-16
Q6NMM8469 Probable glucuronoxylan g no no 0.626 0.656 0.253 1e-14
Q8S1X8415 Probable glucuronosyltran no no 0.640 0.759 0.253 2e-14
Q9SSE8470 Probable glycosyltransfer no no 0.550 0.576 0.271 2e-14
Q9LFP3480 Probable glycosyltransfer no no 0.461 0.472 0.284 4e-14
Q9ZUV3448 Probable glucuronoxylan g no no 0.563 0.618 0.255 2e-13
>sp|Q94AA9|XGD1_ARATH Xylogalacturonan beta-1,3-xylosyltransferase OS=Arabidopsis thaliana GN=XGD1 PE=1 SV=2 Back     alignment and function desciption
 Score = 90.1 bits (222), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 134/287 (46%), Gaps = 22/287 (7%)

Query: 189 ADVIFVPFFSS----LSYNRYSKLRGKEKISVNKMLQRKLVQFLMNQDGWKRLGGKDHLI 244
           A V F+PF  +      Y   + + G  +  ++++++  +         W R  G DH +
Sbjct: 215 AHVFFIPFSVAKVIHFVYKPITSVEGFSRARLHRLIEDYVDVVATKHPYWNRSQGGDHFM 274

Query: 245 VAHH--PNSMLDARRQLGSAMFVLADFGRYPVEIANVEKDIIAPYMHLVRTIPG----GE 298
           V+ H     ++D   +L    F+         E      D+  P ++L +   G    G+
Sbjct: 275 VSCHDWAPDVIDGNPKLFEK-FIRGLCNANTSEGFRPNVDVSIPEIYLPKGKLGPSFLGK 333

Query: 299 SPPFDQRPTLAYFQGAIYRKDGGVIRQELYYLLKDEKDVHFTFGSIQGDGVKNAGQGMAS 358
           SP    R  LA+F G    +  G IR+ L+   K+  +    +  +     K+  + M  
Sbjct: 334 SP--RVRSILAFFAG----RSHGEIRKILFQHWKEMDNEVQVYDRLPPG--KDYTKTMGM 385

Query: 359 SKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTDAIKKG 418
           SKFCL  +G   +S R  +AI + CVPVIISD   LPF DVL++  F I +     IK+ 
Sbjct: 386 SKFCLCPSGWEVASPREVEAIYAGCVPVIISDNYSLPFSDVLNWDSFSIQI-PVSRIKE- 443

Query: 419 FLLNLLRGIKQEQWTKMWERLKEVVQHFEYQYPSQPGDAVDMIWEAV 465
            +  +L+ +   ++ KM++R+ EV QHF    P++P D + M+  ++
Sbjct: 444 -IKTILQSVSLVRYLKMYKRVLEVKQHFVLNRPAKPYDVMHMMLHSI 489
Involved in pectin biosynthesis. Catalyzes the transfer of xylose from UDP-xylose onto oligogalacturonides and endogenous acceptors.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 2EC: .EC: 4EC: 1
>sp|Q3EAR7|GLYT2_ARATH Probable glycosyltransferase At3g42180 OS=Arabidopsis thaliana GN=At3g42180 PE=2 SV=2 Back     alignment and function description
>sp|Q3E9A4|GLYT5_ARATH Probable glycosyltransferase At5g20260 OS=Arabidopsis thaliana GN=At5g20260 PE=3 SV=3 Back     alignment and function description
>sp|Q33AH8|GT101_ORYSJ Probable glucuronosyltransferase GUT1 OS=Oryza sativa subsp. japonica GN=GUT1 PE=2 SV=2 Back     alignment and function description
>sp|Q9FFN2|GLYT3_ARATH Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana GN=At5g03795 PE=3 SV=2 Back     alignment and function description
>sp|Q6NMM8|F8H_ARATH Probable glucuronoxylan glucuronosyltransferase F8H OS=Arabidopsis thaliana GN=F8H PE=2 SV=1 Back     alignment and function description
>sp|Q8S1X8|GT14_ORYSJ Probable glucuronosyltransferase Os01g0926600 OS=Oryza sativa subsp. japonica GN=Os01g0926600 PE=2 SV=1 Back     alignment and function description
>sp|Q9SSE8|GLYT1_ARATH Probable glycosyltransferase At3g07620 OS=Arabidopsis thaliana GN=At3g07620 PE=3 SV=1 Back     alignment and function description
>sp|Q9LFP3|GLYT4_ARATH Probable glycosyltransferase At5g11130 OS=Arabidopsis thaliana GN=At5g11120/At5g11130 PE=3 SV=2 Back     alignment and function description
>sp|Q9ZUV3|IRX7_ARATH Probable glucuronoxylan glucuronosyltransferase IRX7 OS=Arabidopsis thaliana GN=IRX7 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query492
359491711498 PREDICTED: xylogalacturonan beta-1,3-xyl 0.985 0.973 0.728 0.0
255547405490 catalytic, putative [Ricinus communis] g 0.979 0.983 0.710 0.0
297733976455 unnamed protein product [Vitis vinifera] 0.912 0.986 0.718 0.0
449439621494 PREDICTED: probable glucuronoxylan glucu 0.987 0.983 0.659 0.0
356565097472 PREDICTED: xylogalacturonan beta-1,3-xyl 0.953 0.993 0.665 0.0
356507133484 PREDICTED: probable glycosyltransferase 0.979 0.995 0.673 0.0
356516800493 PREDICTED: xylogalacturonan beta-1,3-xyl 0.993 0.991 0.671 0.0
224129654375 predicted protein [Populus trichocarpa] 0.756 0.992 0.773 1e-177
18410670461 exostosin-like protein [Arabidopsis thal 0.908 0.969 0.587 1e-163
5882750458 F25A4.34 [Arabidopsis thaliana] gi|12324 0.908 0.975 0.587 1e-163
>gi|359491711|ref|XP_002284930.2| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  731 bits (1888), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/493 (72%), Positives = 414/493 (83%), Gaps = 8/493 (1%)

Query: 1   MSEKGILPSRFLFCLITISMFLLIISSSFLLQFSSTSFIPRSVFKLILLNSTSVFLKANV 60
           MSEK +LPSRFLFCLITISMFLLI+SS FLLQFS+TSFIP SVFKLIL+NSTSV+ K++ 
Sbjct: 1   MSEKSMLPSRFLFCLITISMFLLILSSLFLLQFSNTSFIPNSVFKLILVNSTSVYFKSSG 60

Query: 61  ENEPMKLPFMSSKDSQTAT-------GTSSNSNSGNRMAGSFGRQKGKKCDPGQVLLRVY 113
           +NE  KLPF++S  S   +       G+   SN+  +M  + G+ + K CDP Q  LR +
Sbjct: 61  KNEQTKLPFVTSVASPVDSKRPMGREGSCQISNASKKM-DALGQGRRKGCDPNQAHLRAF 119

Query: 114 MYDLPPEFHFGLLGWKGKPNQTWPDVSKQSRIWPYPGGLNLQHSIEYWLTLDLLSSNIAN 173
           MYDLPPEFHFGLLGW GK NQ WP+VS   RI  YPGGLNLQHSIEYWLTLDLLSS+  N
Sbjct: 120 MYDLPPEFHFGLLGWTGKANQIWPNVSNPGRIPSYPGGLNLQHSIEYWLTLDLLSSDTPN 179

Query: 174 IGRPCTTIRVMNSSLADVIFVPFFSSLSYNRYSKLRGKEKISVNKMLQRKLVQFLMNQDG 233
           I RPC+ IRV NSS AD+IFVPFFSSLSYNR+S+L GKEK+SVNKMLQ KLV FLM QD 
Sbjct: 180 IVRPCSAIRVKNSSQADIIFVPFFSSLSYNRHSRLHGKEKVSVNKMLQDKLVNFLMGQDE 239

Query: 234 WKRLGGKDHLIVAHHPNSMLDARRQLGSAMFVLADFGRYPVEIANVEKDIIAPYMHLVRT 293
           WK+LGGK+HLIVAHHPNSMLDAR++LGSAMFVLADFGRYPVEIAN++KD+IAPY H++R+
Sbjct: 240 WKQLGGKNHLIVAHHPNSMLDARKKLGSAMFVLADFGRYPVEIANIDKDVIAPYKHVLRS 299

Query: 294 IPGGESPPFDQRPTLAYFQGAIYRKDGGVIRQELYYLLKDEKDVHFTFGSIQGDGVKNAG 353
            P  +S  F+ RP L YFQGAIYRKDGG IRQELYYLL+DEKDVHFTFGS++G+G+  A 
Sbjct: 300 NPVADSATFEGRPLLVYFQGAIYRKDGGAIRQELYYLLRDEKDVHFTFGSVRGNGINGAS 359

Query: 354 QGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCITVHSTD 413
           +GMASSKFCLNIAGDTPSSNRLFDAI SHCVPVIISDEIELPFEDVLDYSEFCI V ++D
Sbjct: 360 EGMASSKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDEIELPFEDVLDYSEFCIFVRASD 419

Query: 414 AIKKGFLLNLLRGIKQEQWTKMWERLKEVVQHFEYQYPSQPGDAVDMIWEAVSRKVPSVR 473
           A+K GFLLNLLRGIK+E+WTKMWERLKE+  HFEYQYPSQ GDAVDMIW AVSRK+ S++
Sbjct: 420 AVKNGFLLNLLRGIKREKWTKMWERLKEIAHHFEYQYPSQAGDAVDMIWGAVSRKISSIQ 479

Query: 474 FKIHKSNRYIKSH 486
            K+H+ NRY +S 
Sbjct: 480 NKLHRKNRYRRSQ 492

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255547405|ref|XP_002514760.1| catalytic, putative [Ricinus communis] gi|223546364|gb|EEF47866.1| catalytic, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297733976|emb|CBI15223.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449439621|ref|XP_004137584.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356565097|ref|XP_003550781.1| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like [Glycine max] Back     alignment and taxonomy information
>gi|356507133|ref|XP_003522325.1| PREDICTED: probable glycosyltransferase At3g42180-like [Glycine max] Back     alignment and taxonomy information
>gi|356516800|ref|XP_003527081.1| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like [Glycine max] Back     alignment and taxonomy information
>gi|224129654|ref|XP_002320639.1| predicted protein [Populus trichocarpa] gi|222861412|gb|EEE98954.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|18410670|ref|NP_565089.1| exostosin-like protein [Arabidopsis thaliana] gi|16209709|gb|AAL14411.1| At1g74680/F1M20_36 [Arabidopsis thaliana] gi|27363220|gb|AAO11529.1| At1g74680/F1M20_36 [Arabidopsis thaliana] gi|332197500|gb|AEE35621.1| exostosin-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|5882750|gb|AAD55303.1|AC008263_34 F25A4.34 [Arabidopsis thaliana] gi|12324821|gb|AAG52383.1|AC011765_35 unknown protein; 115857-117304 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query492
TAIR|locus:2019200461 AT1G74680 "AT1G74680" [Arabido 0.780 0.832 0.668 6.9e-145
TAIR|locus:2078327475 AT3G45400 "AT3G45400" [Arabido 0.752 0.778 0.656 4.1e-136
TAIR|locus:2096439499 EDA5 "AT3G03650" [Arabidopsis 0.774 0.763 0.604 1.5e-124
TAIR|locus:2197639430 AT1G67410 "AT1G67410" [Arabido 0.762 0.872 0.440 1e-84
TAIR|locus:2063494447 ARAD1 "AT2G35100" [Arabidopsis 0.739 0.814 0.387 3.9e-60
TAIR|locus:2155302443 ARAD2 "AT5G44930" [Arabidopsis 0.721 0.801 0.381 2.7e-59
TAIR|locus:2148136511 AT5G16890 "AT5G16890" [Arabido 0.752 0.724 0.364 5.3e-56
TAIR|locus:2026103477 AT1G34270 "AT1G34270" [Arabido 0.656 0.677 0.330 1.4e-41
TAIR|locus:1009023450518 AT5G03795 [Arabidopsis thalian 0.678 0.644 0.274 9.8e-17
TAIR|locus:2145924500 XGD1 "AT5G33290" [Arabidopsis 0.652 0.642 0.25 3.3e-16
TAIR|locus:2019200 AT1G74680 "AT1G74680" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1391 (494.7 bits), Expect = 6.9e-145, Sum P(2) = 6.9e-145
 Identities = 258/386 (66%), Positives = 314/386 (81%)

Query:   102 KCDPGQVLLRVYMYDLPPEFHFGLLGWKGKPNQTWPDVSKQSRIWPYPGGLNLQHSIEYW 161
             KCD  + +L+V+MYDLP EFHFG+L W  K ++ WP+V+  S I  YPGGLN QHS+EYW
Sbjct:    67 KCDRDRDVLKVFMYDLPSEFHFGILNWHKKGSEIWPNVNNISTIPSYPGGLNRQHSVEYW 126

Query:   162 LTLDLLSSNIANIGRPCTT--IRVMNSSLADVIFVPFFSSLSYNRYSKLRGKEKISVNKM 219
             LTLDLL+S    I RPC++  IRV NS+ AD++FVPFF+SLSYNR SKLRG E  S +++
Sbjct:   127 LTLDLLASETPEIKRPCSSAAIRVKNSNEADIVFVPFFASLSYNRKSKLRGNETSSDDRL 186

Query:   220 LQRKLVQFLMNQDGWKRLGGKDHLIVAHHPNSMLDARRQLGSAMFVLADFGRYPVEIANV 279
             LQ +LV+FL +QD WKR  GKDHLIVAHHPNS+L AR  LGSAMFVL+DFGRY   IAN+
Sbjct:   187 LQERLVEFLKSQDEWKRFDGKDHLIVAHHPNSLLYARNFLGSAMFVLSDFGRYSSAIANL 246

Query:   280 EKDIIAPYMHLVRTIPGGESPPFDQRPTLAYFQGAIYRKDGGVIRQELYYLLKDEKDVHF 339
             EKDIIAPY+H+V+TI   ES  F++RP LAYFQGAIYRKDGG IRQELY LLKDEKDVHF
Sbjct:   247 EKDIIAPYVHVVKTISNNESASFEKRPVLAYFQGAIYRKDGGTIRQELYNLLKDEKDVHF 306

Query:   340 TFGSIQGDGVKNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDV 399
              FG+++G+G K  G+GMASSKFCLNIAGDTPSSNRLFDAI SHCVPVIISD+IELPFED 
Sbjct:   307 AFGTVRGNGTKQTGKGMASSKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDQIELPFEDT 366

Query:   400 LDYSEFCITVHSTDAIKKGFLLNLLRGIKQEQWTKMWERLKEVVQHFEYQYPSQPGDAVD 459
             LDYS F + VH+++A+KK FL+N+LRGI ++QW K W RLKEV   FEY++PSQ GD+V+
Sbjct:   367 LDYSGFSVFVHASEAVKKEFLVNILRGITEDQWKKKWGRLKEVAGCFEYRFPSQVGDSVN 426

Query:   460 MIWEAVSRKVPSVRFKIHKSNRYIKS 485
             MIW AVS K+ S++F +H+ NRY +S
Sbjct:   427 MIWSAVSHKLSSLQFDVHRKNRYRRS 452
GO:0003824 "catalytic activity" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0016020 "membrane" evidence=IEA;ISS
TAIR|locus:2078327 AT3G45400 "AT3G45400" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096439 EDA5 "AT3G03650" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2197639 AT1G67410 "AT1G67410" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2063494 ARAD1 "AT2G35100" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2155302 ARAD2 "AT5G44930" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148136 AT5G16890 "AT5G16890" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026103 AT1G34270 "AT1G34270" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:1009023450 AT5G03795 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145924 XGD1 "AT5G33290" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query492
pfam03016292 pfam03016, Exostosin, Exostosin family 3e-56
>gnl|CDD|217320 pfam03016, Exostosin, Exostosin family Back     alignment and domain information 
 Score =  188 bits (480), Expect = 3e-56
 Identities = 97/327 (29%), Positives = 144/327 (44%), Gaps = 48/327 (14%)

Query: 110 LRVYMYDLPPEFHFGLLGWKGKPNQTWPDVSKQSRIWPYPGGLNLQHSIEYWLTLDLLSS 169
           L+VY+YDLP  F           N     + + S        L  Q++ E  L   +L+S
Sbjct: 5   LKVYVYDLPRRF-----------NLLEDVLPETSWY------LTHQYAAESILHKSILNS 47

Query: 170 NIANIGRPCTTIRVMNSSLADVIFVPFFSSLSYNRYSKLRGKEKISVNKMLQRKLVQFLM 229
                       R ++   AD+ FVPF++SLS                 +L  +LV++L 
Sbjct: 48  ----------RCRTLDPDEADLFFVPFYTSLSVGT--------NAVERDLLPSELVEWLE 89

Query: 230 NQDGWKRLGGKDHLIVAHHP---NSMLDARRQLGSAMFVLADFGRYPVEIANVEKDIIAP 286
           +   W R GG+DH+IV  HP   ++         + +  +   G +  +      D+  P
Sbjct: 90  SLPYWNRSGGRDHIIVNSHPFGGSAFDRLPALNNNTILAVLAGGGFSEDQFRPGFDVPLP 149

Query: 287 YMHLVRTIPGGES--PPFDQRPTLAYFQGAIYRKDGGV----IRQELYYLLKDEKDVHFT 340
                 ++   ES   P  +R TL +F G       G     IR  L    K+  D    
Sbjct: 150 AYFHPNSVDDLESDGMPPSKRKTLLFFAGGPRPAGKGALANAIRDLLIEECKNSPDFQCE 209

Query: 341 FGSIQGDGVKNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVL 400
            G+      +N  + + SS+FCL   GDTP+S RLFDA+ + C+PVIISD  ELPFEDV+
Sbjct: 210 -GNQSCGNPENYMELLRSSRFCLVPPGDTPTSPRLFDALRAGCIPVIISDGWELPFEDVI 268

Query: 401 DYSEFCITVHSTDAIKKGFLLNLLRGI 427
           D+S+F + V   D      L  +LR I
Sbjct: 269 DWSKFSVRVPENDIPS---LPEILRAI 292

The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. Length = 292

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 492
KOG1021464 consensus Acetylglucosaminyltransferase EXT1/exost 100.0
PF03016302 Exostosin: Exostosin family; InterPro: IPR004263 H 100.0
KOG2264 907 consensus Exostosin EXT1L [Signal transduction mec 99.93
KOG1022 691 consensus Acetylglucosaminyltransferase EXT2/exost 99.61
cd03814364 GT1_like_2 This family is most closely related to 96.28
PF00852349 Glyco_transf_10: Glycosyltransferase family 10 (fu 96.27
cd03820348 GT1_amsD_like This family is most closely related 95.45
cd03801374 GT1_YqgM_like This family is most closely related 95.41
PF00534172 Glycos_transf_1: Glycosyl transferases group 1; In 95.27
cd03822366 GT1_ecORF704_like This family is most closely rela 94.88
PLN02871465 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 94.87
cd03794394 GT1_wbuB_like This family is most closely related 94.73
cd03818396 GT1_ExpC_like This family is most closely related 94.57
cd03806419 GT1_ALG11_like This family is most closely related 94.17
cd03819355 GT1_WavL_like This family is most closely related 94.13
TIGR03088374 stp2 sugar transferase, PEP-CTERM/EpsH1 system ass 94.11
cd03808359 GT1_cap1E_like This family is most closely related 93.59
PRK09814333 beta-1,6-galactofuranosyltransferase; Provisional 93.33
cd04962371 GT1_like_5 This family is most closely related to 93.21
cd05844367 GT1_like_7 Glycosyltransferases catalyze the trans 93.2
cd03800398 GT1_Sucrose_synthase This family is most closely r 93.05
PRK15427406 colanic acid biosynthesis glycosyltransferase WcaL 93.04
cd03823359 GT1_ExpE7_like This family is most closely related 92.84
cd03809365 GT1_mtfB_like This family is most closely related 92.84
TIGR03449405 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino 92.65
cd03821375 GT1_Bme6_like This family is most closely related 92.05
cd03798377 GT1_wlbH_like This family is most closely related 91.71
cd04951360 GT1_WbdM_like This family is most closely related 91.42
cd03792372 GT1_Trehalose_phosphorylase Trehalose phosphorylas 90.82
TIGR02149388 glgA_Coryne glycogen synthase, Corynebacterium fam 90.63
PF1352492 Glyco_trans_1_2: Glycosyl transferases group 1 89.65
cd03807365 GT1_WbnK_like This family is most closely related 89.52
PRK10307412 putative glycosyl transferase; Provisional 89.5
PLN02949463 transferase, transferring glycosyl groups 89.33
cd03816415 GT1_ALG1_like This family is most closely related 89.11
PRK09922359 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D 88.99
PRK15484380 lipopolysaccharide 1,2-N-acetylglucosaminetransfer 88.8
cd04949372 GT1_gtfA_like This family is most closely related 88.77
cd03804351 GT1_wbaZ_like This family is most closely related 87.91
cd03817374 GT1_UGDG_like This family is most closely related 87.67
cd04955363 GT1_like_6 This family is most closely related to 87.65
cd03805392 GT1_ALG2_like This family is most closely related 87.55
cd03811353 GT1_WabH_like This family is most closely related 86.3
cd03802335 GT1_AviGT4_like This family is most closely relate 85.75
TIGR02095473 glgA glycogen/starch synthases, ADP-glucose type. 85.62
KOG2619372 consensus Fucosyltransferase [Carbohydrate transpo 85.24
TIGR03087397 stp1 sugar transferase, PEP-CTERM/EpsH1 system ass 84.28
PF13692135 Glyco_trans_1_4: Glycosyl transferases group 1; PD 84.26
cd03795357 GT1_like_4 This family is most closely related to 83.51
cd03813475 GT1_like_3 This family is most closely related to 83.47
PRK00654466 glgA glycogen synthase; Provisional 83.4
cd03825365 GT1_wcfI_like This family is most closely related 83.26
cd03799355 GT1_amsK_like This is a family of GT1 glycosyltran 83.03
TIGR02472439 sucr_P_syn_N sucrose-phosphate synthase, putative, 81.79
PRK14098489 glycogen synthase; Provisional 81.56
cd03812358 GT1_CapH_like This family is most closely related 81.12
PRK14099485 glycogen synthase; Provisional 80.71
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information 
Probab=100.00  E-value=1.8e-64  Score=539.85  Aligned_cols=364  Identities=34%  Similarity=0.499  Sum_probs=299.3

Q ss_pred             CCCCCCCccEEEeecCCchhhhhhhccCCCCCCCCCC---CCC----CCCCCCCCCCCC--CccchhhHHHhhhhhcccc
Q 011152          102 KCDPGQVLLRVYMYDLPPEFHFGLLGWKGKPNQTWPD---VSK----QSRIWPYPGGLN--LQHSIEYWLTLDLLSSNIA  172 (492)
Q Consensus       102 ~c~~~~~~~~VYvYdLPp~Fn~~ll~~c~~~~~~w~d---~~~----~~~~~~~~~g~~--~~~s~e~w~~~d~~~~e~~  172 (492)
                      .|.+    .+||||++|+.|+.+++.+|......|..   +|.    .+..+.|++..+  ..+..++|+.+||+++|.+
T Consensus        69 ~~~~----~~v~~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~E~~  144 (464)
T KOG1021|consen   69 ICAG----ASVYVYNLPSGFDVSLLLFHKQIPTSPNNKKFMCSYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYASEGI  144 (464)
T ss_pred             cccC----cceeeeccchhhhhhhhccCccccccCcchhhhhhhhhhcccCceEEecCCCCccccCCCcccccchhHHHH
Confidence            4666    79999999999999999999863224555   552    344566655444  5677789999999999999


Q ss_pred             ccCCC---CceeecCCCCCCcEEEEcccccccccccc-cccCcchhhhhHHHHHHHHHHHhcCccccccCCccEEEEecc
Q 011152          173 NIGRP---CTTIRVMNSSLADVIFVPFFSSLSYNRYS-KLRGKEKISVNKMLQRKLVQFLMNQDGWKRLGGKDHLIVAHH  248 (492)
Q Consensus       173 ~~~r~---~s~~rT~DP~eAdlFfVP~y~~l~~~~~~-~~~~~~~~~~~~~l~~~lv~~L~~~PyW~R~gGrDHf~v~~~  248 (492)
                      +|.+.   .++|||.||++||+||||||++++++++. +.........++.++.+++.|+++||||||++|+|||||++|
T Consensus       145 ~~~~~~~~~~~~Rt~dp~~Ad~f~vPf~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v~~~  224 (464)
T KOG1021|consen  145 FHNRMLRRESAFRTLDPLEADAFYVPFYASLDYNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFFVACH  224 (464)
T ss_pred             HHHHHhcccCceecCChhhCcEEEEcceeeEehhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEEEeCC
Confidence            99883   68999999999999999999999997763 221212345677889999999999999999999999999999


Q ss_pred             CCchhHHHHhhcCcEEEeecCCC--CcccccCCC-ceeeccccccccCCCCC-----CCCCCCCCCeEEEEeeccccCCC
Q 011152          249 PNSMLDARRQLGSAMFVLADFGR--YPVEIANVE-KDIIAPYMHLVRTIPGG-----ESPPFDQRPTLAYFQGAIYRKDG  320 (492)
Q Consensus       249 d~~~~~~~~~~~~ai~vl~~fg~--~~~~~~~~~-kDVviP~~~~~~~~p~~-----~~~~~~~R~~L~~FaG~~~~~~~  320 (492)
                      +++.......+++++..+.+++.  ....-+.+. +||++||++..++....     ......+|++|++|+|+.   .+
T Consensus       225 ~~~~~~~~~~~~~~~~~i~~~~n~a~ls~~~~~~~~dv~iP~~~~~~~~~~~~~~~~~~~~~~~R~~L~~F~G~~---~~  301 (464)
T KOG1021|consen  225 DWGDFRRRSDWGASISLIPEFCNGALLSLEFFPWNKDVAIPYPTIPHPLSPPENSWQGGVPFSNRPILAFFAGAP---AG  301 (464)
T ss_pred             cchheeeccchhhHHHHHHhhCCcceeecccccCCCcccCCCccCcCccCccccccccCCCCCCCceEEEEeccc---cC
Confidence            99977665445555555555552  112223455 99999999876654221     234567999999999996   58


Q ss_pred             chhhHHHHHHhhc----CCCeEEEeCcccCCCcchhhhcccCCcEEEeeCCCCCCCchHHHHHhcCceeEEeeCCcccCc
Q 011152          321 GVIRQELYYLLKD----EKDVHFTFGSIQGDGVKNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPF  396 (492)
Q Consensus       321 ~~iR~~L~~~~~~----~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIPViisd~~~LPF  396 (492)
                      +.||++|+++|++    ...+.+..|...|+++..|.+.|++|+|||||+||+++|+|+||||++|||||||+|+++|||
T Consensus       302 ~~iR~~L~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf  381 (464)
T KOG1021|consen  302 GQIRSILLDLWKKDPDTEVFVNCPRGKVSCDRPLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPF  381 (464)
T ss_pred             CcHHHHHHHHhhcCcCccccccCCCCccccCCcchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCc
Confidence            8999999999998    233455567667888999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCcEEEEEeccccchhhhHHHHHhCCCHHHHHHHHHHHHH-HhhceEecC--CCCCCCHHHHHHHHHHhhchhhh
Q 011152          397 EDVLDYSEFCITVHSTDAIKKGFLLNLLRGIKQEQWTKMWERLKE-VVQHFEYQY--PSQPGDAVDMIWEAVSRKVPSVR  473 (492)
Q Consensus       397 ~dvlDw~~fSV~I~e~dv~~~~~l~~iL~~I~~~~i~~Mr~~l~~-v~~~f~y~~--p~~~~DAf~~il~~l~~Rv~~~r  473 (492)
                      ++++||++|||+|+++++.+.  +.++|.+|+.+++.+||+++++ +.++|++..  |.+.+||||+++++|..|+.+++
T Consensus       382 ~~~~d~~~fSV~v~~~~v~~~--~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~~~~~~~~~da~~~~~~~v~~r~~~~~  459 (464)
T KOG1021|consen  382 GDVLDWTEFSVFVPEKDVPEL--IKNILLSIPEEEVLRMRENVIRLVPRHFLKKPPGPPKRGDAFHMILHSLWRRLHKLR  459 (464)
T ss_pred             CCCccceEEEEEEEHHHhhhH--HHHHHHhcCHHHHHHHHHHHHHHHHhhEEeCCCCCCCcchhHHHHHhhhhhcccccc
Confidence            999999999999998888773  5999999999999999999995 999999998  77889999999999999998876


Q ss_pred             h
Q 011152          474 F  474 (492)
Q Consensus       474 ~  474 (492)
                      .
T Consensus       460 ~  460 (464)
T KOG1021|consen  460 S  460 (464)
T ss_pred             c
Confidence            3

>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses [] Back     alignment and domain information
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms] Back     alignment and domain information
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase Back     alignment and domain information
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional Back     alignment and domain information
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional Back     alignment and domain information
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase Back     alignment and domain information
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli Back     alignment and domain information
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose Back     alignment and domain information
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family Back     alignment and domain information
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 Back     alignment and domain information
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK10307 putative glycosyl transferase; Provisional Back     alignment and domain information
>PLN02949 transferase, transferring glycosyl groups Back     alignment and domain information
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional Back     alignment and domain information
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional Back     alignment and domain information
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding Back     alignment and domain information
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type Back     alignment and domain information
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A Back     alignment and domain information
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK00654 glgA glycogen synthase; Provisional Back     alignment and domain information
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain Back     alignment and domain information
>PRK14098 glycogen synthase; Provisional Back     alignment and domain information
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK14099 glycogen synthase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query492
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 46.4 bits (109), Expect = 2e-05
 Identities = 84/541 (15%), Positives = 152/541 (28%), Gaps = 148/541 (27%)

Query: 9   SRFLFCLI------TISMFL---LIISSSFLL-QFSSTSFIPRSVFKLI------LLNST 52
           +  LF  +       +  F+   L I+  FL+    +    P  + ++       L N  
Sbjct: 64  TLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDN 123

Query: 53  SVFLKANVENEPMKLPFMSSKDSQTATGTSSNSN---SGNRMAGSFGRQKGKKCDPGQVL 109
            VF K NV      L     K  Q         N    G  + GS     GK      V 
Sbjct: 124 QVFAKYNVSRLQPYL-----KLRQALLELRPAKNVLIDG--VLGS-----GKTWVALDVC 171

Query: 110 LRVYMYDLPPEFHFGL----LGWKGKPNQ------------TWPDVSKQSRIWPYPGGLN 153
           L    Y +  +  F +    L     P                   S+          ++
Sbjct: 172 LS---YKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH 228

Query: 154 --------LQHSIEYWLTLDLL----SSNIA---NIGRPCTTI---RVMNSSLADVIFVP 195
                   L  S  Y   L +L    ++      N+   C  +   R     + D     
Sbjct: 229 SIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS--CKILLTTR--FKQVTDF---- 280

Query: 196 FFSSLSYNRYSKLRGKEKISVNKMLQRKLVQFLMNQDGWKRLGGKD--HLIVAHHPN--S 251
               LS    + +          +   ++   L+    +     +D    ++  +P   S
Sbjct: 281 ----LSAATTTHISLDHHSMT--LTPDEVKSLLLK---YLDCRPQDLPREVLTTNPRRLS 331

Query: 252 MLDARRQLGSAMFVLADFGRYPVEIANVEKDIIAPYMHLVRTIPGGESPPFDQRPTLAYF 311
           ++    + G A +   D  ++ V    +   I +    L          P + R    + 
Sbjct: 332 IIAESIRDGLATW---DNWKH-VNCDKLTTIIESSLNVL---------EPAEYRK--MFD 376

Query: 312 QGAIYRKD------------GGVIRQEL---------YYLL-KDEKDVHFTFGSIQGDGV 349
           + +++                 VI+ ++         Y L+ K  K+   +  SI  +  
Sbjct: 377 RLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELK 436

Query: 350 KNAGQGMA-----------SSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFED 398
                  A              F  +           +  I  H   +   + + L F  
Sbjct: 437 VKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTL-FRM 495

Query: 399 V-LDYSEFC---ITVHSTDAIKKGFLLNLLRGIK--QEQWTK---MWERLKEVVQHFEYQ 449
           V LD+  F    I   ST     G +LN L+ +K  +         +ERL   +  F  +
Sbjct: 496 VFLDFR-FLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPK 554

Query: 450 Y 450
            
Sbjct: 555 I 555

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query492
3qhp_A166 Type 1 capsular polysaccharide biosynthesis prote 97.33
2bfw_A200 GLGA glycogen synthase; glycosyltransferase family 96.2
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 94.97
2gek_A406 Phosphatidylinositol mannosyltransferase (PIMA); G 94.44
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 94.39
2nzw_A371 Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {H 94.21
3c48_A438 Predicted glycosyltransferases; retaining glycosyl 93.86
1f0k_A364 MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe 93.68
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 92.9
3fro_A439 GLGA glycogen synthase; glycosyltransferase family 92.57
3oy2_A413 Glycosyltransferase B736L; rossmann fold, GDP-mann 92.54
2x6q_A416 Trehalose-synthase TRET; biosynthetic protein; 2.2 92.39
2f9f_A177 First mannosyl transferase (WBAZ-1); alpha-beta pr 91.69
1rzu_A485 Glycogen synthase 1; glycosyl-transferase, GT-B fo 89.26
3rhz_A339 GTF3, nucleotide sugar synthetase-like protein; gl 88.52
2qzs_A485 Glycogen synthase; glycosyl-transferase, GT-B fold 88.04
2r60_A499 Glycosyl transferase, group 1; rossmann-fold; 1.80 87.79
2vsy_A568 XCC0866; transferase, glycosyl transferase, GT-B, 81.94
3vue_A536 GBSS-I, granule-bound starch synthase 1, chloropla 81.84
2iuy_A342 Avigt4, glycosyltransferase; antibiotics, family G 81.76
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Back     alignment and structure
Probab=97.33  E-value=0.0013  Score=58.00  Aligned_cols=129  Identities=12%  Similarity=0.129  Sum_probs=79.7

Q ss_pred             CeEEEEeeccccCCCchhhHHHHHHhhcCCCeEEEeCcccCCCcchhhhcccCCcEEEeeCCCCCCCchHHHHHhcCcee
Q 011152          306 PTLAYFQGAIYRKDGGVIRQELYYLLKDEKDVHFTFGSIQGDGVKNAGQGMASSKFCLNIAGDTPSSNRLFDAIASHCVP  385 (492)
Q Consensus       306 ~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~P~Gd~~~s~RlfDAi~aGCIP  385 (492)
                      .+-+.+.|.      +..+..+.+..+.... .+.+|...   ..+..+.|..+..++.|.-.......+.|||++||||
T Consensus        32 ~~~l~i~G~------g~~~~~~~~~~~~~~~-~v~~g~~~---~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vP  101 (166)
T 3qhp_A           32 DIVLLLKGK------GPDEKKIKLLAQKLGV-KAEFGFVN---SNELLEILKTCTLYVHAANVESEAIACLEAISVGIVP  101 (166)
T ss_dssp             GEEEEEECC------STTHHHHHHHHHHHTC-EEECCCCC---HHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCE
T ss_pred             CeEEEEEeC------CccHHHHHHHHHHcCC-eEEEeecC---HHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCc
Confidence            456677774      2234555444433222 33334332   3567889999999999986666678999999999999


Q ss_pred             EEeeCCcccCccCCCCCCcEEEEEeccccchhh-hHHHHHhCCCHHHHHHHHHHHHHHhhceEec
Q 011152          386 VIISDEIELPFEDVLDYSEFCITVHSTDAIKKG-FLLNLLRGIKQEQWTKMWERLKEVVQHFEYQ  449 (492)
Q Consensus       386 Viisd~~~LPF~dvlDw~~fSV~I~e~dv~~~~-~l~~iL~~I~~~~i~~Mr~~l~~v~~~f~y~  449 (492)
                      ||..+..- ...+++.-...  .++..|..... .|..++.  .++...+|.++.++..++|.|.
T Consensus       102 vi~~~~~~-~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~~--~~~~~~~~~~~~~~~~~~~s~~  161 (166)
T 3qhp_A          102 VIANSPLS-ATRQFALDERS--LFEPNNAKDLSAKIDWWLE--NKLERERMQNEYAKSALNYTLE  161 (166)
T ss_dssp             EEECCTTC-GGGGGCSSGGG--EECTTCHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHC--
T ss_pred             EEeeCCCC-chhhhccCCce--EEcCCCHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHCChh
Confidence            99944321 11223333333  45555544422 1444444  7888999999988877877765
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Back     alignment and structure
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A* Back     alignment and structure
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Back     alignment and structure
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Back     alignment and structure
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Back     alignment and structure
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Back     alignment and structure
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* Back     alignment and structure
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Back     alignment and structure
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Back     alignment and structure
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* Back     alignment and structure
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query492
d2nzwa1349 Alpha1,3-fucosyltransferase FucT {Helicobacter pyl 96.45
d2bisa1437 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 93.35
d2iw1a1370 Lipopolysaccharide core biosynthesis protein RfaG 91.58
d2bfwa1196 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 87.45
d1f0ka_351 Peptidoglycan biosynthesis glycosyltransferase Mur 87.06
d1rzua_477 Glycogen synthase 1, GlgA {Agrobacterium tumefacie 86.07
d2f9fa1166 First mannosyl transferase WbaZ {Archaeoglobus ful 83.77
>d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: FucT-like
domain: Alpha1,3-fucosyltransferase FucT
species: Helicobacter pylori [TaxId: 210]

Probab=96.45  E-value=0.003  Score=62.25  Aligned_cols=120  Identities=21%  Similarity=0.292  Sum_probs=75.9

Q ss_pred             CCCCeEEEEe-eccccCCCchhhHHHHHHhhcCCCeEEEeCccc---CCCcchhhhcccCCcEEEeeCC---CCCCCchH
Q 011152          303 DQRPTLAYFQ-GAIYRKDGGVIRQELYYLLKDEKDVHFTFGSIQ---GDGVKNAGQGMASSKFCLNIAG---DTPSSNRL  375 (492)
Q Consensus       303 ~~R~~L~~Fa-G~~~~~~~~~iR~~L~~~~~~~~~~~~~~g~~~---~~~~~~y~~~m~~S~FCL~P~G---d~~~s~Rl  375 (492)
                      ..|+-+.+|. +.    .++.+|.++++++..-..+.. .|...   +....+-.+.|++.+|+||.--   .+..+-.+
T Consensus       177 ~~K~kFcs~v~Sn----~~~~~R~~~~~~L~k~~~Vd~-~G~~~nn~~~~~~~K~~~l~~ykF~l~~EN~~~~~YvTEKi  251 (349)
T d2nzwa1         177 PLKRGFASFVASN----PNAPIRNAFYDALNSIEPVTG-GGSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKI  251 (349)
T ss_dssp             TTSSEEEEECCSC----CCCHHHHHHHHHHTTTSCCEE-CSSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCCCTHH
T ss_pred             cccCceEEEEEcC----CCCchHHHHHHHHhccCeecc-cCccccCCCCchhhHHHHHhCCCeEEEECCcCCCCCcchHH
Confidence            4566677664 33    245789999999987665443 45432   1223345678999999999753   45678999


Q ss_pred             HHHHhcCceeEEeeCC-c--ccCccCCCCCCcEEEEEeccccchhhhHHHHHhCCC--HHHHHHHH
Q 011152          376 FDAIASHCVPVIISDE-I--ELPFEDVLDYSEFCITVHSTDAIKKGFLLNLLRGIK--QEQWTKMW  436 (492)
Q Consensus       376 fDAi~aGCIPViisd~-~--~LPF~dvlDw~~fSV~I~e~dv~~~~~l~~iL~~I~--~~~i~~Mr  436 (492)
                      +||+.+|||||..++. +  .+|=      ..|   |...|......+.+.|..++  ++.+.+|-
T Consensus       252 ~da~~~g~iPIy~G~~~i~~~f~~------~sf---I~~~df~s~~el~~~i~~l~~n~~~Y~~~~  308 (349)
T d2nzwa1         252 IDAYFSHTIPIYWGSPSVAKDFNP------KSF---VNVHDFKNFDEAIDYIKYLHTHKNAYLDML  308 (349)
T ss_dssp             HHHHHTTCEEEEESCTTGGGTSCG------GGS---EEGGGSSSHHHHHHHHHHHHTCHHHHHHHH
T ss_pred             HHHHhCCeEEEEECCCcHHHcCCC------ccE---EEhhhCCCHHHHHHHHHHHhcCHHHHHHHH
Confidence            9999999999999974 3  2442      333   33333333233666676664  44455543
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure