Citrus Sinensis ID: 011195

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-
MGERNASSFGFISRNFLFFLLAITSILFSLSWFFVLRSTGSPHFVDHSLLSNSAPPSIIDNGSSKESKPKSLDHVKNSVQEEELPQKKKDIKCNKNKKGVLKVYMYDLPPQFHFELLDWKSQGGSVWPDIRTRIPHYPGGLNLQHSIEYWLTLDLLASELPDNPSACGAIRVHNSSGADIIFVPFFSSLSYNKYSKKSPQQNKINNKVLQEKVVRFVTSQEEWKRSGGRDHLIVAHHPNSMLDARTKLWPAMFILADFGRYPPHIANVDKDVIAPYKHMVKSYVNDTSEFDSRPILLYFQGAIYRKDGGSVRQELFYLLKDEKDVHFSFGSVQKNGIHQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNIKKDEWTHMRDRLKEVQRFFEFQFPSKEGDAVQMIWQAVARKVPAMRRNIHKSRRFSRTVTGKEEGLKLIPSQPNFW
ccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHcccccEEEccccccccHHHHHcccccEEEEcccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccHHHHHHHHHcccccEEEEccccccccccccccccccccEEEEccccccccHHHHHHHHcccEEEEEEcccccccccccccccEEEEEEccccccHHHHHHHHccccHHHHHHHHHHHHHHHHcEEEccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccc
cccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccEEEEEccccHHcHHHHHHHccccEEcccccccccccccccccHHHHHHHHHHHHHccccccccccccEEEEccHHHccEEEEEEEEEEEEcccccccccccccHHHHHHHHHHHHHHcccHHcccccccEEEEEccccHHHHHHHHHHHHHEEEHccccccccEcccccccccccccccccccccccccccccEEEEEccccccccccccHHHHHHHHHcccccEEEccccccccHHHHHHHHcccEEEEcccccccccHHHHHHHHHccccEEEEcccccccHccccHccEEEEEEHHccccccHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHcHHHHHHHHccccEEEccccccccccccccccccc
mgernassfgfiSRNFLFFLLAITSILFSLSWFFVLrstgsphfvdhsllsnsappsiidngsskeskpksldhvknsvqeeelpqkkkdikcnknkkgVLKVYmydlppqfhfelldwksqggsvwpdirtriphypgglnlqHSIEYWLTLDLLaselpdnpsacgairvhnssgadiifvpffsslsynkyskkspqqnkinnKVLQEKVVRFVTSQEewkrsggrdhlivahhpnsmldarTKLWPAMFILadfgrypphianvdkdviapYKHMVKSYVndtsefdsrpillyfqgaiyrkdggsVRQELFYLLKdekdvhfsfgsvqkngihqasqgmhsskfclniagdtpssnrLFDAIAshcvpviisdeielpyedildySEFCIFVRTSDAVKGNFLINLVRNIKKDEWTHMRDRLKEVQRFFefqfpskegdAVQMIWQAVARKVPAMRRNihksrrfsrtvtgkeeglklipsqpnfw
mgernassfGFISRNFLFFLLAITSILFSLSWFFVLRSTGSPHFVDHSLLSNSAPPSIIDNGSSKESKPKSLDHVknsvqeeelpqkkkdikcnknkKGVLKVYMYDLPPQFHFELLDWKSQGGSVWPDIRTRIPHYPGGLNLQHSIEYWLTLDLLASELPDNPSACGAIRVHNSSGADIIFVPFFSSLSYNKYSkkspqqnkinnkvlqeKVVRFVTSqeewkrsggrdhlivAHHPNSMLDARTKLWPAMFILADFGRYPPHIANVDKDVIAPYKHMVKSYVndtsefdsrPILLYFQGAIYRKDGGSVRQELFYLLKDEKDVHFSFGSVQKNGIHQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTsdavkgnflinlvrnikkdewTHMRDRLKEVQRFFEFQfpskegdavQMIWQAVArkvpamrrnihksrrfsrtvtgkeeglklipsqpnfw
MGERNASSFGFISRNFLFFLLAITSILFSLSWFFVLRSTGSPHFVDHSLLSNSAPPSIIDNGSSKESKPKSLDHVKNSVQEEELPQkkkdikcnknkkGVLKVYMYDLPPQFHFELLDWKSQGGSVWPDIRTRIPHYPGGLNLQHSIEYWLTLDLLASELPDNPSACGAIRVHNSSGADIIFVPFFsslsynkyskksPQQNKINNKVLQEKVVRFVTSQEEWKRSGGRDHLIVAHHPNSMLDARTKLWPAMFILADFGRYPPHIANVDKDVIAPYKHMVKSYVNDTSEFDSRPILLYFQGAIYRKDGGSVRQELFYLLKDEKDVHFSFGSVQKNGIHQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNIKKDEWTHMRDRLKEVQRFFEFQFPSKEGDAVQMIWQAVARKVPAMRRNIHKSRRFSRTVTGKEEGLKLIPSQPNFW
********FGFISRNFLFFLLAITSILFSLSWFFVLRSTGSPHFVD*************************************************NKKGVLKVYMYDLPPQFHFELLDWKSQGGSVWPDIRTRIPHYPGGLNLQHSIEYWLTLDLLASELPDNPSACGAIRVHNSSGADIIFVPFFSSLSYNKY************KVLQEKVVRFVTSQEEWKRSGGRDHLIVAHHPNSMLDARTKLWPAMFILADFGRYPPHIANVDKDVIAPYKHMVKSYVNDTSEFDSRPILLYFQGAIYRKDGGSVRQELFYLLKDEKDVHFSFGSVQKNGIH******HSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNIKKDEWTHMRDRLKEVQRFFEFQFPSKEGDAVQMIWQAVARKVPAM*******************************
*************RNFLFFLLAITSILFSLSWFFVLRSTGS**********************************************************VLKVYMYDLPPQFHFELLDWKSQGGSVWPDIRTRIPHYPGGLNLQHSIEYWLTLDLLASELPDNPSACGAIRVHNSSGADIIFVPFFSSLSYNKYSKKSPQQNKINNKVLQEKVVRFVTSQEEWKRSGGRDHLIVAHHPNSMLDARTKLWPAMFILADFGRYPPHIANVDKDVIAPYKHMVKSYVNDTSEFDSRPILLYFQGAIYRKDGGSVRQELFYLLKDEKDVHFSFGSVQKNGIHQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNIKKDEWTHMRDRLKEVQRFFEFQFPSKEGDAVQMIWQAVARKVPAMRR******************LKLIPS*P***
MGERNASSFGFISRNFLFFLLAITSILFSLSWFFVLRSTGSPHFVDHSLLSNSAPPSIID**************************KKKDIKCNKNKKGVLKVYMYDLPPQFHFELLDWKSQGGSVWPDIRTRIPHYPGGLNLQHSIEYWLTLDLLASELPDNPSACGAIRVHNSSGADIIFVPFFSSLSYNK********NKINNKVLQEKVVRFVT********GGRDHLIVAHHPNSMLDARTKLWPAMFILADFGRYPPHIANVDKDVIAPYKHMVKSYVNDTSEFDSRPILLYFQGAIYRKDGGSVRQELFYLLKDEKDVHFSFGSVQKNGIHQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNIKKDEWTHMRDRLKEVQRFFEFQFPSKEGDAVQMIWQAVARKVPAMRRNIHKSRRFSRTVTGKEEGLKLIPSQPNFW
*********GFISRNFLFFLLAITSILFSLSWFFVLRST***********************************************KKKDIKCNKNKKGVLKVYMYDLPPQFHFELLDWKSQGGSVWPDIRTRIPHYPGGLNLQHSIEYWLTLDLLASELPDNPSACGAIRVHNSSGADIIFVPFFSSLSYNKYSKKSPQQNKINNKVLQEKVVRFVTSQEEWKRSGGRDHLIVAHHPNSMLDARTKLWPAMFILADFGRYPPHIANVDKDVIAPYKHMVKSYVNDTSEFDSRPILLYFQGAIYRKDGGSVRQELFYLLKDEKDVHFSFGSVQKNGIHQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNIKKDEWTHMRDRLKEVQRFFEFQFPSKEGDAVQMIWQAVARKVPAMRRNIHKSRRFSRTVTGKEEGLKLIPS*****
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGERNASSFGFISRNFLFFLLAITSILFSLSWFFVLRSTGSPHFVDHSLLSNSAPPSIIDNGSSKESKPKSLDHVKNSVQEEELPQKKKDIKCNKNKKGVLKVYMYDLPPQFHFELLDWKSQGGSVWPDIRTRIPHYPGGLNLQHSIEYWLTLDLLASELPDNPSACGAIRVHNSSGADIIFVPFFSSLSYNKYSKKSPQQNKINNKVLQEKVVRFVTSQEEWKRSGGRDHLIVAHHPNSMLDARTKLWPAMFILADFGRYPPHIANVDKDVIAPYKHMVKSYVNDTSEFDSRPILLYFQGAIYRKDGGSVRQELFYLLKDEKDVHFSFGSVQKNGIHQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNIKKDEWTHMRDRLKEVQRFFEFQFPSKEGDAVQMIWQAVARKVPAMRRNIHKSRRFSRTVTGKEEGLKLIPSQPNFW
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query491 2.2.26 [Sep-21-2011]
Q8S1X7417 Probable glucuronosyltran no no 0.706 0.832 0.241 1e-17
Q9ZUV3448 Probable glucuronoxylan g no no 0.802 0.879 0.245 1e-15
Q33AH8417 Probable glucuronosyltran no no 0.700 0.824 0.228 2e-15
Q8S1X9422 Probable glucuronosyltran no no 0.663 0.772 0.230 4e-15
Q94AA9500 Xylogalacturonan beta-1,3 no no 0.676 0.664 0.238 1e-14
Q8S1X8415 Probable glucuronosyltran no no 0.659 0.780 0.230 1e-14
Q7XLG3420 Probable glucuronosyltran no no 0.668 0.780 0.221 3e-14
Q6H4N0434 Probable glucuronosyltran no no 0.665 0.753 0.233 3e-14
Q940Q8415 Probable beta-1,4-xylosyl no no 0.659 0.780 0.226 7e-14
Q9FZJ1412 Probable beta-1,4-xylosyl no no 0.714 0.851 0.216 1e-13
>sp|Q8S1X7|GT15_ORYSJ Probable glucuronosyltransferase Os01g0926700 OS=Oryza sativa subsp. japonica GN=Os01g0926700 PE=2 SV=1 Back     alignment and function desciption
 Score = 91.7 bits (226), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/402 (24%), Positives = 162/402 (40%), Gaps = 55/402 (13%)

Query: 75  VKNSVQEEELPQKKKDIKCNKNKKGVLKVYMYDLPPQFHFELLDWKSQGGSVWPDIRTRI 134
           V+   Q E +     D+    +  G LKVY+YDLP +++ +LL                 
Sbjct: 26  VRQGHQTERISGSAGDV-LEDDPVGRLKVYVYDLPSKYNKKLLK---------------- 68

Query: 135 PHYPGGLNLQHSIEYWLTLDLLASELPDNPSACGAIRVHNSSGADIIFVPFFSSLSYNKY 194
              P  LN   + E ++   LL+S          A+R  N   AD  + P +++      
Sbjct: 69  -KDPRCLNHMFAAEIFMHRFLLSS----------AVRTFNPEEADWFYTPVYTTCDLTPS 117

Query: 195 SKKSPQQNKINNKVLQEKVVRFVTSQEEWKRSGGRDHLIVAHH----------PNSMLDA 244
               P ++    ++++  +    T+   W RS G DH  V  H            ++   
Sbjct: 118 GLPLPFKSP---RMMRSAIELIATNWPYWNRSEGADHFFVTPHDFGACFHYQEEKAIGRG 174

Query: 245 RTKLWPAMFILADFGRYPPHIANVDKDV-IAPYKHMVKSYVNDTSEFDSRPILLYFQGAI 303
              L     ++  FG+   H+   D  + I PY    K   +       R I +YF+G  
Sbjct: 175 ILPLLQRATLVQTFGQKN-HVCLKDGSITIPPYAPPQKMQAHLIPPDTPRSIFVYFRGLF 233

Query: 304 YRKDGGSVRQELFYLLKDEKDVHFSFGS-----VQKNGIHQASQGMHSSKFCLNIAGDTP 358
           Y  D  +  +  +Y       V  +F +     +  +      + M  S FCL   G  P
Sbjct: 234 Y--DTSNDPEGGYYARGARASVWENFKNNPLFDISTDHPPTYYEDMQRSVFCLCPLGWAP 291

Query: 359 SSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNIKKD 418
            S RL +A+   C+PVII+D+I LP+ D + + E  +FV   D  K   L +++ +I  D
Sbjct: 292 WSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGVFVAEEDVPK---LDSILTSIPTD 348

Query: 419 EWTHMRDRLK--EVQRFFEFQFPSKEGDAVQMIWQAVARKVP 458
                +  L    +++   F  P++ GDA   I   +ARK+P
Sbjct: 349 VILRKQRLLANPSMKQAMLFPQPAQAGDAFHQILNGLARKLP 390
Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 2EC: .EC: 4EC: .EC: -EC: .EC: -
>sp|Q9ZUV3|IRX7_ARATH Probable glucuronoxylan glucuronosyltransferase IRX7 OS=Arabidopsis thaliana GN=IRX7 PE=2 SV=1 Back     alignment and function description
>sp|Q33AH8|GT101_ORYSJ Probable glucuronosyltransferase GUT1 OS=Oryza sativa subsp. japonica GN=GUT1 PE=2 SV=2 Back     alignment and function description
>sp|Q8S1X9|GT13_ORYSJ Probable glucuronosyltransferase Os01g0926400 OS=Oryza sativa subsp. japonica GN=Os01g0926400 PE=2 SV=1 Back     alignment and function description
>sp|Q94AA9|XGD1_ARATH Xylogalacturonan beta-1,3-xylosyltransferase OS=Arabidopsis thaliana GN=XGD1 PE=1 SV=2 Back     alignment and function description
>sp|Q8S1X8|GT14_ORYSJ Probable glucuronosyltransferase Os01g0926600 OS=Oryza sativa subsp. japonica GN=Os01g0926600 PE=2 SV=1 Back     alignment and function description
>sp|Q7XLG3|GT42_ORYSJ Probable glucuronosyltransferase Os04g0398600 OS=Oryza sativa subsp. japonica GN=Os04g0398600 PE=2 SV=2 Back     alignment and function description
>sp|Q6H4N0|GT21_ORYSJ Probable glucuronosyltransferase Os02g0520750 OS=Oryza sativa subsp. japonica GN=Os02g0520750 PE=2 SV=1 Back     alignment and function description
>sp|Q940Q8|IX10L_ARATH Probable beta-1,4-xylosyltransferase IRX10L OS=Arabidopsis thaliana GN=IRX10L PE=2 SV=1 Back     alignment and function description
>sp|Q9FZJ1|IRX10_ARATH Probable beta-1,4-xylosyltransferase IRX10 OS=Arabidopsis thaliana GN=IRX10 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query491
255580236512 catalytic, putative [Ricinus communis] g 0.987 0.947 0.715 0.0
225439168488 PREDICTED: xylogalacturonan beta-1,3-xyl 0.993 1.0 0.700 0.0
147818414488 hypothetical protein VITISV_039537 [Viti 0.993 1.0 0.696 0.0
60657600509 secondary cell wall-related glycosyltran 1.0 0.964 0.689 0.0
356497977509 PREDICTED: xylogalacturonan beta-1,3-xyl 1.0 0.964 0.666 0.0
224144904463 predicted protein [Populus trichocarpa] 0.940 0.997 0.676 0.0
224123938450 predicted protein [Populus trichocarpa] 0.904 0.986 0.698 0.0
357508931510 Secondary cell wall-related glycosyltran 1.0 0.962 0.639 0.0
296085881455 unnamed protein product [Vitis vinifera] 0.926 1.0 0.647 0.0
297815694479 exostosin family protein [Arabidopsis ly 0.947 0.970 0.646 0.0
>gi|255580236|ref|XP_002530948.1| catalytic, putative [Ricinus communis] gi|223529463|gb|EEF31420.1| catalytic, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  720 bits (1858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/496 (71%), Positives = 411/496 (82%), Gaps = 11/496 (2%)

Query: 1   MGERNASSFGFISRNFLFFLLAITSILFSLSWFFVLRSTGSPHFVDHSLLSNSAPPSIID 60
           M E+++SS   ISR  LF L +   +LF LSWFFVLRSTG P+F+D SL++N    SIID
Sbjct: 1   MAEKHSSSLVVISRKSLFGLFSFVLVLFILSWFFVLRSTGRPNFIDGSLINNPLY-SIID 59

Query: 61  NGSSKES--KPKSLDHVKNSVQEE--ELPQKK---KDIKCN---KNKKGVLKVYMYDLPP 110
           NGS   S     +L   +   QEE  E PQ+K   KD+KCN   +N+K  LKV+MYDLPP
Sbjct: 60  NGSDAPSIGSRATLADSRGEGQEEAEETPQEKVDVKDVKCNTPLENRKEPLKVFMYDLPP 119

Query: 111 QFHFELLDWKSQGGSVWPDIRTRIPHYPGGLNLQHSIEYWLTLDLLASELPDNPSACGAI 170
           +FHFELLDWK+QG SVWPD+RT+IP YPGGLNLQHSIEYWLTLDLLASE+   P A  AI
Sbjct: 120 EFHFELLDWKAQGDSVWPDLRTKIPGYPGGLNLQHSIEYWLTLDLLASEISGIPRAGSAI 179

Query: 171 RVHNSSGADIIFVPFFSSLSYNKYSKKSPQQNKINNKVLQEKVVRFVTSQEEWKRSGGRD 230
           RV NSS AD+IFVPFFSSLSYN+YSK +P Q +  NK+LQEK+VR+VTSQ EWKRS G+D
Sbjct: 180 RVRNSSEADVIFVPFFSSLSYNRYSKVNPHQKRSKNKLLQEKLVRYVTSQMEWKRSQGQD 239

Query: 231 HLIVAHHPNSMLDARTKLWPAMFILADFGRYPPHIANVDKDVIAPYKHMVKSYVNDTSEF 290
           H+I+AHHPNSMLDAR KLWPA+FILADFGRYPP+IANVDKD+IAPYKH+++SY +D+S F
Sbjct: 240 HIILAHHPNSMLDARMKLWPALFILADFGRYPPNIANVDKDLIAPYKHVIRSYADDSSTF 299

Query: 291 DSRPILLYFQGAIYRKDGGSVRQELFYLLKDEKDVHFSFGSVQKNGIHQASQGMHSSKFC 350
           DSRP LLYFQGAIYRKDGG  RQELFYLLKDEKDVHF FGSVQK+GI++ASQGMH+SKFC
Sbjct: 300 DSRPTLLYFQGAIYRKDGGFARQELFYLLKDEKDVHFQFGSVQKDGINKASQGMHTSKFC 359

Query: 351 LNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLIN 410
           LNIAGDTPSSNRLFDAIASHCVPVIISD+IELPYED+LDYS+FCIFVRTSDA+K  FLIN
Sbjct: 360 LNIAGDTPSSNRLFDAIASHCVPVIISDDIELPYEDVLDYSQFCIFVRTSDAIKEKFLIN 419

Query: 411 LVRNIKKDEWTHMRDRLKEVQRFFEFQFPSKEGDAVQMIWQAVARKVPAMRRNIHKSRRF 470
           L+R I KDEWT M  +LKEV+RFFEFQ+PSKEGDAVQMIWQAVARKVPA+R  I+KS RF
Sbjct: 420 LIRGIGKDEWTQMWQKLKEVERFFEFQYPSKEGDAVQMIWQAVARKVPAIRMKINKSMRF 479

Query: 471 SRTVTGKEEGLKLIPS 486
           SR+       L+ IP+
Sbjct: 480 SRSFGHNIRELRGIPT 495

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225439168|ref|XP_002268382.1| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase [Vitis vinifera] Back     alignment and taxonomy information
>gi|147818414|emb|CAN68950.1| hypothetical protein VITISV_039537 [Vitis vinifera] Back     alignment and taxonomy information
>gi|60657600|gb|AAX33321.1| secondary cell wall-related glycosyltransferase family 47 [Populus tremula x Populus tremuloides] Back     alignment and taxonomy information
>gi|356497977|ref|XP_003517832.1| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like [Glycine max] Back     alignment and taxonomy information
>gi|224144904|ref|XP_002325457.1| predicted protein [Populus trichocarpa] gi|222862332|gb|EEE99838.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224123938|ref|XP_002319201.1| predicted protein [Populus trichocarpa] gi|222857577|gb|EEE95124.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357508931|ref|XP_003624754.1| Secondary cell wall-related glycosyltransferase family [Medicago truncatula] gi|355499769|gb|AES80972.1| Secondary cell wall-related glycosyltransferase family [Medicago truncatula] Back     alignment and taxonomy information
>gi|296085881|emb|CBI31205.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297815694|ref|XP_002875730.1| exostosin family protein [Arabidopsis lyrata subsp. lyrata] gi|297321568|gb|EFH51989.1| exostosin family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query491
TAIR|locus:2078327475 AT3G45400 "AT3G45400" [Arabido 0.796 0.823 0.709 8.3e-164
TAIR|locus:2096439499 EDA5 "AT3G03650" [Arabidopsis 0.926 0.911 0.582 6.3e-140
TAIR|locus:2019200461 AT1G74680 "AT1G74680" [Arabido 0.761 0.811 0.585 1e-124
TAIR|locus:2197639430 AT1G67410 "AT1G67410" [Arabido 0.737 0.841 0.408 5.7e-75
TAIR|locus:2063494447 ARAD1 "AT2G35100" [Arabidopsis 0.804 0.883 0.359 5.4e-63
TAIR|locus:2155302443 ARAD2 "AT5G44930" [Arabidopsis 0.718 0.796 0.377 6.4e-60
TAIR|locus:2148136511 AT5G16890 "AT5G16890" [Arabido 0.735 0.706 0.351 4e-51
TAIR|locus:2026103477 AT1G34270 "AT1G34270" [Arabido 0.525 0.540 0.383 1.2e-42
TAIR|locus:2145924500 XGD1 "AT5G33290" [Arabidopsis 0.792 0.778 0.233 6.1e-15
TAIR|locus:2046163448 FRA8 "FRAGILE FIBER 8" [Arabid 0.588 0.645 0.256 2.1e-13
TAIR|locus:2078327 AT3G45400 "AT3G45400" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1495 (531.3 bits), Expect = 8.3e-164, Sum P(2) = 8.3e-164
 Identities = 283/399 (70%), Positives = 330/399 (82%)

Query:    99 GVLKVYMYDLPPQFHFELLDWKSQGGS---VWPDIRTRIPHYPGGLNLQHSIEYWLTLDL 155
             G LKVYMY++ P+FHF LLDWK + GS   VWPDI+  IP YPGGLNLQHSIEYWLTLDL
Sbjct:    79 GPLKVYMYNMDPEFHFGLLDWKKKEGSDSSVWPDIQKYIPPYPGGLNLQHSIEYWLTLDL 138

Query:   156 LASELPDNPSACGAIRVHNSSGADIIFVPFFXXXXXXXXXXXXPQQNKINNKVLQEKVVR 215
             LASE  + P +  A RV+NSS AD+IFVPFF            P Q    NK LQ K+V 
Sbjct:   139 LASEYENAPRSVAAKRVYNSSEADVIFVPFFSSLSYNRFSKVNPHQKTSRNKDLQGKLVT 198

Query:   216 FVTSQEEWKRSGGRDHLIVAHHPNSMLDARTKLWPAMFILADFGRYPPHIANVDKDVIAP 275
             F+T+QEEWKRSGGRDH+++AHHPNSMLDAR KL+PAMFIL+DFGRYPP +ANV+KDVIAP
Sbjct:   199 FLTAQEEWKRSGGRDHVVLAHHPNSMLDARNKLFPAMFILSDFGRYPPTVANVEKDVIAP 258

Query:   276 YKHMVKSYVNDTSEFDSRPILLYFQGAIYRKDGGSVRQELFYLLKDEKDVHFSFGSVQKN 335
             YKH++K+Y NDTS FDSRPILLYFQGAIYRKDGG VRQELFYLL+DEKDVHFSFGSV+  
Sbjct:   259 YKHVIKAYENDTSGFDSRPILLYFQGAIYRKDGGFVRQELFYLLQDEKDVHFSFGSVRNG 318

Query:   336 GIHQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCI 395
             GI++ASQGMH+SKFCLNIAGDTPSSNRLFDAIASHCVPVIISD+IELP+ED++DYSEF +
Sbjct:   319 GINKASQGMHNSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDDIELPFEDVIDYSEFSV 378

Query:   396 FVRTSDAVKGNFLINLVRNIKKDEWTHMRDRLKEVQRFFEFQFPSKEGDAVQMIWQAVAR 455
             FVRTSDA+K NFL+NL+R I K+EWT M +RLKEV++++EF FPSK  DAVQMIWQA+AR
Sbjct:   379 FVRTSDALKENFLVNLIRGITKEEWTRMWNRLKEVEKYYEFHFPSKVDDAVQMIWQAIAR 438

Query:   456 KVPAMRRNIHKSRRFSRTV--TGKEEGLK-LIPSQPNFW 491
             KVP ++  IHKSRR+S +V  TGKE     LIP   +FW
Sbjct:   439 KVPGVKMRIHKSRRYSGSVSETGKESRWSSLIPR--SFW 475
GO:0003824 "catalytic activity" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0016020 "membrane" evidence=IEA;ISS
TAIR|locus:2096439 EDA5 "AT3G03650" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2019200 AT1G74680 "AT1G74680" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2197639 AT1G67410 "AT1G67410" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2063494 ARAD1 "AT2G35100" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2155302 ARAD2 "AT5G44930" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148136 AT5G16890 "AT5G16890" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026103 AT1G34270 "AT1G34270" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145924 XGD1 "AT5G33290" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046163 FRA8 "FRAGILE FIBER 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00033710001
SubName- Full=Chromosome chr8 scaffold_68, whole genome shotgun sequence; (488 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query491
pfam03016292 pfam03016, Exostosin, Exostosin family 1e-53
>gnl|CDD|217320 pfam03016, Exostosin, Exostosin family Back     alignment and domain information 
 Score =  181 bits (462), Expect = 1e-53
 Identities = 95/330 (28%), Positives = 138/330 (41%), Gaps = 57/330 (17%)

Query: 101 LKVYMYDLPPQFHFELLDWKSQGGSVWPDIRTRIPHYPGGLNLQHSIEYWLTLDLLASEL 160
           LKVY+YDLP +F+                           L  Q++ E  L   +L S  
Sbjct: 5   LKVYVYDLPRRFNLLEDVLPET---------------SWYLTHQYAAESILHKSILNSR- 48

Query: 161 PDNPSACGAIRVHNSSGADIIFVPFFSSLSYNKYSKKSPQQNKINNKVLQEKVVRFVTSQ 220
                     R  +   AD+ FVPF++SLS           N +   +L  ++V ++ S 
Sbjct: 49  ---------CRTLDPDEADLFFVPFYTSLSVG--------TNAVERDLLPSELVEWLESL 91

Query: 221 EEWKRSGGRDHLIVAHHP--------NSMLDARTKLWPAMFILADFGRYPPHIANVDKDV 272
             W RSGGRDH+IV  HP           L+  T L      +   G +         DV
Sbjct: 92  PYWNRSGGRDHIIVNSHPFGGSAFDRLPALNNNTIL-----AVLAGGGFSEDQFRPGFDV 146

Query: 273 IAPYKHMVKSYVNDTSEFDS---RPILLYFQGAIYRKDG----GSVRQELFYLLKDEKDV 325
             P      S  +  S+      R  LL+F G            ++R  L    K+  D 
Sbjct: 147 PLPAYFHPNSVDDLESDGMPPSKRKTLLFFAGGPRPAGKGALANAIRDLLIEECKNSPDF 206

Query: 326 HFSFGSVQKNGIHQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYE 385
               G+          + + SS+FCL   GDTP+S RLFDA+ + C+PVIISD  ELP+E
Sbjct: 207 QCE-GNQSCGNPENYMELLRSSRFCLVPPGDTPTSPRLFDALRAGCIPVIISDGWELPFE 265

Query: 386 DILDYSEFCIFVRTSDAVKGNFLINLVRNI 415
           D++D+S+F + V  +D      L  ++R I
Sbjct: 266 DVIDWSKFSVRVPENDIPS---LPEILRAI 292

The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. Length = 292

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 491
KOG1021464 consensus Acetylglucosaminyltransferase EXT1/exost 100.0
PF03016302 Exostosin: Exostosin family; InterPro: IPR004263 H 100.0
KOG2264 907 consensus Exostosin EXT1L [Signal transduction mec 99.91
KOG1022 691 consensus Acetylglucosaminyltransferase EXT2/exost 99.62
cd03814364 GT1_like_2 This family is most closely related to 96.44
cd03820348 GT1_amsD_like This family is most closely related 95.87
PF00852349 Glyco_transf_10: Glycosyltransferase family 10 (fu 95.82
cd03801374 GT1_YqgM_like This family is most closely related 95.6
cd03794394 GT1_wbuB_like This family is most closely related 95.34
PLN02871465 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 95.25
PF00534172 Glycos_transf_1: Glycosyl transferases group 1; In 95.14
cd03818396 GT1_ExpC_like This family is most closely related 94.9
cd03822366 GT1_ecORF704_like This family is most closely rela 94.85
cd03806419 GT1_ALG11_like This family is most closely related 94.68
TIGR03088374 stp2 sugar transferase, PEP-CTERM/EpsH1 system ass 94.37
cd03819355 GT1_WavL_like This family is most closely related 94.06
cd03808359 GT1_cap1E_like This family is most closely related 93.94
cd05844367 GT1_like_7 Glycosyltransferases catalyze the trans 93.74
cd04962371 GT1_like_5 This family is most closely related to 93.7
cd03800398 GT1_Sucrose_synthase This family is most closely r 93.46
PRK09814333 beta-1,6-galactofuranosyltransferase; Provisional 93.25
TIGR03449405 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino 93.16
cd03809365 GT1_mtfB_like This family is most closely related 93.07
TIGR02149388 glgA_Coryne glycogen synthase, Corynebacterium fam 93.04
cd03807365 GT1_WbnK_like This family is most closely related 92.9
PRK15427406 colanic acid biosynthesis glycosyltransferase WcaL 92.9
cd04951360 GT1_WbdM_like This family is most closely related 92.78
cd03821375 GT1_Bme6_like This family is most closely related 92.45
cd03823359 GT1_ExpE7_like This family is most closely related 92.05
cd03798377 GT1_wlbH_like This family is most closely related 91.5
PRK15484380 lipopolysaccharide 1,2-N-acetylglucosaminetransfer 91.42
cd03804351 GT1_wbaZ_like This family is most closely related 91.31
cd03817374 GT1_UGDG_like This family is most closely related 91.15
cd04949372 GT1_gtfA_like This family is most closely related 90.58
cd03816415 GT1_ALG1_like This family is most closely related 90.45
PRK10307412 putative glycosyl transferase; Provisional 90.03
cd03792372 GT1_Trehalose_phosphorylase Trehalose phosphorylas 89.77
PRK09922359 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D 89.63
TIGR02095473 glgA glycogen/starch synthases, ADP-glucose type. 89.44
cd04955363 GT1_like_6 This family is most closely related to 89.31
PF1352492 Glyco_trans_1_2: Glycosyl transferases group 1 89.25
PLN02949463 transferase, transferring glycosyl groups 89.04
PRK00654466 glgA glycogen synthase; Provisional 87.89
PRK14099485 glycogen synthase; Provisional 87.75
cd03802335 GT1_AviGT4_like This family is most closely relate 87.73
PRK14098489 glycogen synthase; Provisional 87.07
cd03811353 GT1_WabH_like This family is most closely related 86.49
cd03805392 GT1_ALG2_like This family is most closely related 86.45
PF13692135 Glyco_trans_1_4: Glycosyl transferases group 1; PD 85.83
TIGR03087397 stp1 sugar transferase, PEP-CTERM/EpsH1 system ass 85.32
TIGR02472439 sucr_P_syn_N sucrose-phosphate synthase, putative, 84.45
cd03795357 GT1_like_4 This family is most closely related to 84.33
cd03799355 GT1_amsK_like This is a family of GT1 glycosyltran 82.89
cd03825365 GT1_wcfI_like This family is most closely related 82.44
cd03813475 GT1_like_3 This family is most closely related to 82.31
cd03812358 GT1_CapH_like This family is most closely related 82.15
PHA01630331 putative group 1 glycosyl transferase 82.08
PRK15490578 Vi polysaccharide biosynthesis protein TviE; Provi 81.31
cd03791476 GT1_Glycogen_synthase_DULL1_like This family is mo 80.97
KOG2619372 consensus Fucosyltransferase [Carbohydrate transpo 80.14
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information 
Probab=100.00  E-value=1.8e-64  Score=539.65  Aligned_cols=362  Identities=34%  Similarity=0.515  Sum_probs=297.0

Q ss_pred             CCCCcCCCCCCccEEEEecCCccccHHHhhhhcCCCCCCCC---cCCCCCCCCC--------CCCcccchhHHHHHHhhh
Q 011195           89 KDIKCNKNKKGVLKVYMYDLPPQFHFELLDWKSQGGSVWPD---IRTRIPHYPG--------GLNLQHSIEYWLTLDLLA  157 (491)
Q Consensus        89 ~~~~c~~~~~~~~kVYVYDLPp~Fn~~ll~~~~~~~~~W~d---~c~~~~~~~~--------g~~~~~s~e~w~~~dll~  157 (491)
                      .+..|.+     .+||||++|+.||.+++++|......|..   +|.+..+.+.        |....+..++|+.+++++
T Consensus        66 ~~~~~~~-----~~v~~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~  140 (464)
T KOG1021|consen   66 GQAICAG-----ASVYVYNLPSGFDVSLLLFHKQIPTSPNNKKFMCSYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYA  140 (464)
T ss_pred             chhcccC-----cceeeeccchhhhhhhhccCccccccCcchhhhhhhhhhcccCceEEecCCCCccccCCCcccccchh
Confidence            4456777     89999999999999999988653325666   7766544332        222345567899999999


Q ss_pred             ccCCCCCCC---CCceecCCCCCCcEEEEcccccccccccC-CCCCccchhhhHHHHHHHHHHHhccccccccCCcceEE
Q 011195          158 SELPDNPSA---CGAIRVHNSSGADIIFVPFFSSLSYNKYS-KKSPQQNKINNKVLQEKVVRFVTSQEEWKRSGGRDHLI  233 (491)
Q Consensus       158 ~e~~~h~r~---~s~~rT~dP~eAdlFfVP~y~~l~~~~~~-~~~~~~~~~~~~~l~~~l~~~L~~~PyWnRsgGrDHfl  233 (491)
                      .|.++|.+.   .++|||.||+|||+||||||++++++++. +.....+...++.++..++.|+++||||||++|+||||
T Consensus       141 ~E~~~~~~~~~~~~~~Rt~dp~~Ad~f~vPf~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~  220 (464)
T KOG1021|consen  141 SEGIFHNRMLRRESAFRTLDPLEADAFYVPFYASLDYNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFF  220 (464)
T ss_pred             HHHHHHHHHhcccCceecCChhhCcEEEEcceeeEehhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEE
Confidence            999999994   57899999999999999999999997763 32222234456788999999999999999999999999


Q ss_pred             EeccCCchhhhhhcccCcEEEeecCCC---CCCCCCCCC-CccccCCccccccccC------CCCCCCCCCeEEEEecce
Q 011195          234 VAHHPNSMLDARTKLWPAMFILADFGR---YPPHIANVD-KDVIAPYKHMVKSYVN------DTSEFDSRPILLYFQGAI  303 (491)
Q Consensus       234 v~~~~~~~~~~r~~l~~ai~~l~~fg~---~~~~~~~~~-kDVviPy~~~~~~~~~------~~~~~~~R~~L~~FaG~~  303 (491)
                      |++|+++....+.....++..+.++++   ...+ +++. +||++||++..++...      ......+|++|++|+|+.
T Consensus       221 v~~~~~~~~~~~~~~~~~~~~i~~~~n~a~ls~~-~~~~~~dv~iP~~~~~~~~~~~~~~~~~~~~~~~R~~L~~F~G~~  299 (464)
T KOG1021|consen  221 VACHDWGDFRRRSDWGASISLIPEFCNGALLSLE-FFPWNKDVAIPYPTIPHPLSPPENSWQGGVPFSNRPILAFFAGAP  299 (464)
T ss_pred             EeCCcchheeeccchhhHHHHHHhhCCcceeecc-cccCCCcccCCCccCcCccCccccccccCCCCCCCceEEEEeccc
Confidence            999999987765555555555566653   2222 4456 9999999866544321      123457999999999995


Q ss_pred             ecCCCcchHHHHHHHhhcCC----CeEEEeCcccCCChhhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCC
Q 011195          304 YRKDGGSVRQELFYLLKDEK----DVHFSFGSVQKNGIHQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDE  379 (491)
Q Consensus       304 ~~~~~~~iR~~L~~~~~~~~----d~~~~~g~~~~~~~~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~  379 (491)
                         .++.||+.|+++|++++    +..+..|...|+++..|++.|++|+|||||+||++||+|+||||++|||||||+|+
T Consensus       300 ---~~~~iR~~L~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~  376 (464)
T KOG1021|consen  300 ---AGGQIRSILLDLWKKDPDTEVFVNCPRGKVSCDRPLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDG  376 (464)
T ss_pred             ---cCCcHHHHHHHHhhcCcCccccccCCCCccccCCcchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCC
Confidence               48899999999999822    23444566677888999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcEEEEEecccccccchHHHHHhcCCHHHHHHHHHHHHH-hhhceEEcC--CCCCCCHHHHHHHHHHHH
Q 011195          380 IELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNIKKDEWTHMRDRLKE-VQRFFEFQF--PSKEGDAVQMIWQAVARK  456 (491)
Q Consensus       380 ~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~iL~~I~~e~v~~Mr~~l~~-v~~~f~y~~--p~~~~DAf~~il~~l~~R  456 (491)
                      +++||++++||++|||+|+++++++.  +.++|.+|+.+++.+||+++++ +.++|.+..  |.+.+||||+++++|+.|
T Consensus       377 ~~lpf~~~~d~~~fSV~v~~~~v~~~--~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~~~~~~~~~da~~~~~~~v~~r  454 (464)
T KOG1021|consen  377 IQLPFGDVLDWTEFSVFVPEKDVPEL--IKNILLSIPEEEVLRMRENVIRLVPRHFLKKPPGPPKRGDAFHMILHSLWRR  454 (464)
T ss_pred             cccCcCCCccceEEEEEEEHHHhhhH--HHHHHHhcCHHHHHHHHHHHHHHHHhhEEeCCCCCCCcchhHHHHHhhhhhc
Confidence            99999999999999999999999883  5999999999999999999995 999999998  778899999999999999


Q ss_pred             hhhhH
Q 011195          457 VPAMR  461 (491)
Q Consensus       457 ~~~~r  461 (491)
                      +.+++
T Consensus       455 ~~~~~  459 (464)
T KOG1021|consen  455 LHKLR  459 (464)
T ss_pred             ccccc
Confidence            98776

>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses [] Back     alignment and domain information
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms] Back     alignment and domain information
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase Back     alignment and domain information
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional Back     alignment and domain information
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase Back     alignment and domain information
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family Back     alignment and domain information
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional Back     alignment and domain information
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli Back     alignment and domain information
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional Back     alignment and domain information
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding Back     alignment and domain information
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK10307 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose Back     alignment and domain information
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional Back     alignment and domain information
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type Back     alignment and domain information
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 Back     alignment and domain information
>PLN02949 transferase, transferring glycosyl groups Back     alignment and domain information
>PRK00654 glgA glycogen synthase; Provisional Back     alignment and domain information
>PRK14099 glycogen synthase; Provisional Back     alignment and domain information
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK14098 glycogen synthase; Provisional Back     alignment and domain information
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A Back     alignment and domain information
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain Back     alignment and domain information
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PHA01630 putative group 1 glycosyl transferase Back     alignment and domain information
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query491
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 43.7 bits (102), Expect = 1e-04
 Identities = 68/543 (12%), Positives = 155/543 (28%), Gaps = 168/543 (30%)

Query: 63  SSKESKPKSLDHVKNSVQEEELPQKKKDIKCNKNKKGVLKVYM-------YD-LPPQFHF 114
           S +E     +DH+  S        +      +K ++ V + ++       Y  L      
Sbjct: 47  SKEE-----IDHIIMSKDAVSGTLRLFWTLLSKQEEMV-QKFVEEVLRINYKFLMSPIKT 100

Query: 115 ELLD-------WKSQGGSVWPDIR-------TRIPHY----PGGLNLQHSIEY------- 149
           E          +  Q   ++ D +       +R+  Y       L L+ + +        
Sbjct: 101 EQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPA-KNVLIDGVL 159

Query: 150 -----WLTLDLLASELPDNPSACGA--IRVHNSSGADIIFVP---FFSSLSYNKYSKKSP 199
                W+ LD+  S             + + N +  + +          +  N  S+   
Sbjct: 160 GSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDH 219

Query: 200 QQN-KINNKVLQEKVVRF---------------VTSQEEWK------------R------ 225
             N K+    +Q ++ R                V + + W             R      
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTD 279

Query: 226 ---SGGRDHLIVAHHPNSMLDARTKLWPAMFILADFGRYPPH-----------IANVDKD 271
              +    H+ + HH  ++     K     ++       P             IA   +D
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRD 339

Query: 272 VIA---PYKH--------MVKSYVNDTSEFDSRPILLYFQGAIYRKD------------G 308
            +A    +KH        +++S +N     + R   ++ + +++                
Sbjct: 340 GLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRK--MFDRLSVFPPSAHIPTILLSLIWF 397

Query: 309 GSVRQELFYLL----------KDEKDVHFSFGSVQKNGIHQAS--QGMHSS--------- 347
             ++ ++  ++          K  K+   S  S+      +      +H S         
Sbjct: 398 DVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPK 457

Query: 348 KFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVR-------TS 400
            F  +           +  I  H   +   + + L     LD+     F+        T+
Sbjct: 458 TFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFR----FLEQKIRHDSTA 513

Query: 401 DAVKGNFLINLVRNIKKDEWTHMRD-------RLKEVQRFF----EFQFPSKEGDAVQMI 449
               G+ ++N ++ +K  +  ++ D        +  +  F     E    SK  D +++ 
Sbjct: 514 WNASGS-ILNTLQQLKFYK-PYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIA 571

Query: 450 WQA 452
             A
Sbjct: 572 LMA 574
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query491
3qhp_A166 Type 1 capsular polysaccharide biosynthesis prote 97.49
2bfw_A200 GLGA glycogen synthase; glycosyltransferase family 96.55
2gek_A406 Phosphatidylinositol mannosyltransferase (PIMA); G 95.65
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 95.18
3c48_A438 Predicted glycosyltransferases; retaining glycosyl 95.06
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 94.32
3fro_A439 GLGA glycogen synthase; glycosyltransferase family 93.76
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 93.6
1f0k_A364 MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe 93.18
2f9f_A177 First mannosyl transferase (WBAZ-1); alpha-beta pr 92.69
3oy2_A413 Glycosyltransferase B736L; rossmann fold, GDP-mann 92.5
2nzw_A371 Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {H 92.48
2x6q_A416 Trehalose-synthase TRET; biosynthetic protein; 2.2 91.79
1rzu_A485 Glycogen synthase 1; glycosyl-transferase, GT-B fo 90.85
2qzs_A485 Glycogen synthase; glycosyl-transferase, GT-B fold 90.37
2r60_A499 Glycosyl transferase, group 1; rossmann-fold; 1.80 88.52
3rhz_A339 GTF3, nucleotide sugar synthetase-like protein; gl 87.75
2iuy_A342 Avigt4, glycosyltransferase; antibiotics, family G 86.08
2x0d_A413 WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge 84.7
2vsy_A568 XCC0866; transferase, glycosyl transferase, GT-B, 82.59
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Back     alignment and structure
Probab=97.49  E-value=0.0007  Score=59.70  Aligned_cols=130  Identities=15%  Similarity=0.173  Sum_probs=80.4

Q ss_pred             CeEEEEecceecCCCcchHHHHHHHhhcCCCeEEEeCcccCCChhhhhhcccCccEEEeeCCCCCCchhHHHHHHhCcee
Q 011195          294 PILLYFQGAIYRKDGGSVRQELFYLLKDEKDVHFSFGSVQKNGIHQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVP  373 (491)
Q Consensus       294 ~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~d~~~~~g~~~~~~~~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIP  373 (491)
                      ++-+.+.|.      +..++.+.++.+.... .+.+|...   ..+..+.++.+..++.|.-.......+.|||++||||
T Consensus        32 ~~~l~i~G~------g~~~~~~~~~~~~~~~-~v~~g~~~---~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vP  101 (166)
T 3qhp_A           32 DIVLLLKGK------GPDEKKIKLLAQKLGV-KAEFGFVN---SNELLEILKTCTLYVHAANVESEAIACLEAISVGIVP  101 (166)
T ss_dssp             GEEEEEECC------STTHHHHHHHHHHHTC-EEECCCCC---HHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCE
T ss_pred             CeEEEEEeC------CccHHHHHHHHHHcCC-eEEEeecC---HHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCc
Confidence            466777774      2334555555443222 33334432   3568899999999999986666788999999999999


Q ss_pred             EEeeCCcccCCCCCCCCCcEEEEEecccccccch-HHHHHhcCCHHHHHHHHHHHHHhhhceEEcC
Q 011195          374 VIISDEIELPYEDILDYSEFCIFVRTSDAVKGNF-LINLVRNIKKDEWTHMRDRLKEVQRFFEFQF  438 (491)
Q Consensus       374 VIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~-l~~iL~~I~~e~v~~Mr~~l~~v~~~f~y~~  438 (491)
                      ||..+..- ...+++.-...  .++..|..+... |.+++.  .++...+|.++.++...+|.|..
T Consensus       102 vi~~~~~~-~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~~--~~~~~~~~~~~~~~~~~~~s~~~  162 (166)
T 3qhp_A          102 VIANSPLS-ATRQFALDERS--LFEPNNAKDLSAKIDWWLE--NKLERERMQNEYAKSALNYTLEN  162 (166)
T ss_dssp             EEECCTTC-GGGGGCSSGGG--EECTTCHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHC---
T ss_pred             EEeeCCCC-chhhhccCCce--EEcCCCHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHCChhh
Confidence            99944321 11233333333  455556544211 333443  67888999998888777777653
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Back     alignment and structure
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Back     alignment and structure
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Back     alignment and structure
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Back     alignment and structure
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A* Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Back     alignment and structure
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Back     alignment and structure
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Back     alignment and structure
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* Back     alignment and structure
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Back     alignment and structure
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Back     alignment and structure
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query491
d2nzwa1349 Alpha1,3-fucosyltransferase FucT {Helicobacter pyl 96.66
d2bisa1437 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 93.91
d2iw1a1370 Lipopolysaccharide core biosynthesis protein RfaG 93.1
d1rzua_477 Glycogen synthase 1, GlgA {Agrobacterium tumefacie 90.21
d2bfwa1196 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 89.31
d2f9fa1166 First mannosyl transferase WbaZ {Archaeoglobus ful 88.64
d1f0ka_351 Peptidoglycan biosynthesis glycosyltransferase Mur 85.36
>d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: FucT-like
domain: Alpha1,3-fucosyltransferase FucT
species: Helicobacter pylori [TaxId: 210]

Probab=96.66  E-value=0.0028  Score=62.49  Aligned_cols=123  Identities=17%  Similarity=0.227  Sum_probs=77.8

Q ss_pred             CCCCeEEEEecceecCCCcchHHHHHHHhhcCCCeEEEeCccc---CCChhhhhhcccCccEEEeeCC---CCCCchhHH
Q 011195          291 DSRPILLYFQGAIYRKDGGSVRQELFYLLKDEKDVHFSFGSVQ---KNGIHQASQGMHSSKFCLNIAG---DTPSSNRLF  364 (491)
Q Consensus       291 ~~R~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~d~~~~~g~~~---~~~~~~y~~~m~~S~FCL~P~G---ds~~s~Rlf  364 (491)
                      ..|+.+.+|.-+-   .++..|..+++.+..-..+.. .|.+.   +....+-.+.+.+.+|+||...   .+..+-.++
T Consensus       177 ~~K~kFcs~v~Sn---~~~~~R~~~~~~L~k~~~Vd~-~G~~~nn~~~~~~~K~~~l~~ykF~l~~EN~~~~~YvTEKi~  252 (349)
T d2nzwa1         177 PLKRGFASFVASN---PNAPIRNAFYDALNSIEPVTG-GGSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKII  252 (349)
T ss_dssp             TTSSEEEEECCSC---CCCHHHHHHHHHHTTTSCCEE-CSSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCCCTHHH
T ss_pred             cccCceEEEEEcC---CCCchHHHHHHHHhccCeecc-cCccccCCCCchhhHHHHHhCCCeEEEECCcCCCCCcchHHH
Confidence            4566666665321   245789999999976655432 34332   1223345678999999999764   456799999


Q ss_pred             HHHHhCceeEEeeCC-cccCCCCCCCCCcEEEEEecccccccchHHHHHhcCC--HHHHHHHH
Q 011195          365 DAIASHCVPVIISDE-IELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNIK--KDEWTHMR  424 (491)
Q Consensus       365 DAi~aGCIPVIisd~-~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~iL~~I~--~e~v~~Mr  424 (491)
                      ||+++|||||..++. +.-    .++-..|   |...|......+.+.|..++  ++.+.+|-
T Consensus       253 da~~~g~iPIy~G~~~i~~----~f~~~sf---I~~~df~s~~el~~~i~~l~~n~~~Y~~~~  308 (349)
T d2nzwa1         253 DAYFSHTIPIYWGSPSVAK----DFNPKSF---VNVHDFKNFDEAIDYIKYLHTHKNAYLDML  308 (349)
T ss_dssp             HHHHTTCEEEEESCTTGGG----TSCGGGS---EEGGGSSSHHHHHHHHHHHHTCHHHHHHHH
T ss_pred             HHHhCCeEEEEECCCcHHH----cCCCccE---EEhhhCCCHHHHHHHHHHHhcCHHHHHHHH
Confidence            999999999999974 321    1223333   33444444334777777775  55555554
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure