Citrus Sinensis ID: 011204

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-

MLLNTCILLECLFFLIFSSSATISSLNLTLPHQHPDPDAVAQDVQRRVNVSLSRRQALAINAQCQTGNPIDDCWHCDPNWAANRQRLADCSVGFAQGTLGGKGGQIYVVTDSSDSDPANPTPGTLRHAVIQTEPIWITFASNMLIKLKHELIINSYKTIDGRGANVEITGNGCLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCRRGYIHVVNNDFTSWEMYAIGGSANPTINSQGNRYTAPPDDNAKEVTKRVETDESEWAGWNWRTEGDVMVNGAFFVPSGAGLSTQYAKASSVEPKSAALIDQLTMNAGVFGGHRDDEGEGNSYPGFSGGGSGSGGTNRNNGDGDFFGMIFGSGASRLPPPSPSTSIFLSLLIILILYTITNHDAPLSLQLLLL

cccHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHcccccccccccccccccccccEEEEcccccccccccccccHHHHHHccccEEEEEEEcEEEEEEcEEEEccccCECccccEEEEcCEEEEEEcccEEEEEEcEEEEcccccccccccccccccccccccccccEEEEccccEEEEcccccccccccEEEEEcccEEEEEEEECcccccccccccccccccccccEEEEEEEccccccccccccccccEEEEEccCECccccEEECcccccCEEECcCEEEcccccccccEEEEEccccccccccCEECcccEEEcccEEccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccHHHHHHHHHHEEEcccccccccccccccc

**LNTCILLECLFFLIFSSSATISSLNLTL***HPDPDAVAQ*****VNVSLSRRQALAINAQCQTGNPIDDCWHCDPNWAANRQRLADCSVGFAQGTLGGKGGQIYVVTDSSDSDPANPTPGTLRHAVIQTEPIWITFASNMLIKLKHELIINSYKTIDGRGANVEITGNGCLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCRRGYIHVVNNDFTSWEMYAIGGSANPTINSQGNRYTAPPDDNAKEVTKRVETDESEWAGWNWRTEGDVMVNGAFFVPSGAGLSTQY****S***KSAALIDQLTMNAGVFGGHRDDE***************************FFGMIFGS***********TSIFLSLLIILILYTITNHDAPLSLQLLLL

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Pectate lyase		probable	P40973

Prediction of Enzyme Commission Number

EC Number	Description	Confidence Level
4.-.-.-	Lyases.	probable
4.2.-.-	Carbon-oxygen lyases.	probable
4.2.2.-	Acting on polysaccharides.	probable
4.2.2.2	Pectate lyase.	probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1PXZ, chain A
Confidence level:very confident
Coverage over the Query: 67-409
View the alignment between query and template
View the model in PyMOL