Citrus Sinensis ID: 011334

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------49

MMSGNAFTIPSSLGGFVHQEQNPNPNPKPNQAASKKKRNLPGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKDVIKKKVYICPEKTCVHHEPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDSFITHRAFCDALAEESTRLASSVVAAASNLNFRTDHTVNLPQGVPQDVAGSISQFGSGFAGLAEMVQIGSVSNNLFGSSSSNMGNFGHQFQGFHKSMAGATTNSKSANLTLLSELKEETSCLYNSDSTHENKQLKPVAVGPMSATALLQKAAQMGSTRSNNNPITSIFGNGSGFNNVMSSSSSSSNATSYNNNTSLHNTNLSGSAVTLATSDGVMGSSNLRSMNTTTTAAAVATSDTLNQLMMMQTRGDQQNEQQQQVQLKLTRDFLGMTSGNQVQSVRPFLPQELANFASNIGSVSPIGLSQFTSNN

ccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccHHHHHHcccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccHHccccHHHHHcccccccccccccccccccccHHHHHHHccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccHHccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccc

*MSGNAFTIPS*****************************PGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKDVIKKKVYICPEKTCVHHEPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDSFITHRAFCDALAEESTR******************************************************************************************************************************************************************************************************************************************************DFLGM***********FL***LANF*******************

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Zinc finger protein JACKDAW	Probable transcription factor that regulates tissue boundaries and asymmetric cell division by a rapid up-regulation of 'SCARECROW' (SCR), thus controlling the nuclear localization of 'SHORT-ROOT' (SHR) and restricting its action. Required for radial patterning and stem cell maintenance. Counteracted by 'MAGPIE' (MGP).	probable	Q700D2

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2I13, chain A
Confidence level:very confident
Coverage over the Query: 45-87,102-217
View the alignment between query and template
View the model in PyMOL