Citrus Sinensis ID: 011405
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 486 | ||||||
| 255537643 | 677 | transcription factor, putative [Ricinus | 0.987 | 0.709 | 0.767 | 0.0 | |
| 118489526 | 681 | unknown [Populus trichocarpa x Populus d | 0.989 | 0.706 | 0.769 | 0.0 | |
| 225426090 | 684 | PREDICTED: uncharacterized protein LOC10 | 0.993 | 0.706 | 0.767 | 0.0 | |
| 449452266 | 670 | PREDICTED: uncharacterized protein LOC10 | 0.995 | 0.722 | 0.742 | 0.0 | |
| 356513315 | 683 | PREDICTED: uncharacterized protein LOC10 | 0.991 | 0.705 | 0.743 | 0.0 | |
| 356528910 | 682 | PREDICTED: uncharacterized protein LOC10 | 0.991 | 0.706 | 0.733 | 0.0 | |
| 224075038 | 512 | predicted protein [Populus trichocarpa] | 0.880 | 0.835 | 0.793 | 1e-178 | |
| 224053827 | 521 | predicted protein [Populus trichocarpa] | 0.786 | 0.733 | 0.815 | 1e-173 | |
| 297836961 | 646 | hypothetical protein ARALYDRAFT_474940 [ | 0.962 | 0.724 | 0.678 | 1e-160 | |
| 30696974 | 646 | uncharacterized protein [Arabidopsis tha | 0.958 | 0.721 | 0.663 | 1e-159 |
| >gi|255537643|ref|XP_002509888.1| transcription factor, putative [Ricinus communis] gi|223549787|gb|EEF51275.1| transcription factor, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/485 (76%), Positives = 411/485 (84%), Gaps = 5/485 (1%)
Query: 1 MDPSFQRLSFAANYSLNAFKTSGSSRQAGGAGAEDGTDTILRLDSPGSSNPHISASKGIK 60
M+ FQ L FAA NAFK GSS GG AE DT+LRLDSPGSS S SKGIK
Sbjct: 1 MENKFQNLGFAATCPSNAFKILGSSTLVGGPVAEYCADTVLRLDSPGSSVSCTSQSKGIK 60
Query: 61 RKWSLIDGSVHQQVGSTLSLGLGRPSSSSDSKGSSATACTTTSSAKENEEESSMDLDLDF 120
RKW+ IDG++ Q +GS+LSLGLG SSSSDSKGSSATACTT SSAKE +EESS+DL+LDF
Sbjct: 61 RKWNFIDGTMGQHIGSSLSLGLGCSSSSSDSKGSSATACTTMSSAKETDEESSIDLELDF 120
Query: 121 TLHLGNDKMPNPKKSAYSNMKGVELQPKVDLVLSLSTGSPESGITSLHPSSSLLHFGMEM 180
LHLGN+KM +PKKSA SN+KG+ELQPKVDL LSLSTG ES +TS++PSS+ L FGMEM
Sbjct: 121 ALHLGNEKMSSPKKSANSNLKGLELQPKVDLELSLSTGPSESDVTSIYPSSTSLDFGMEM 180
Query: 181 PLLAGGTLNADDGSTSCGWKTGVSLPPLQTAPNKESRFFFDCALRTNDLTANVHDLSSSV 240
G + D+G+ SCGWKTG++L +++ FFF+ +T+D + + DLSSSV
Sbjct: 181 RHAIYGASSVDEGTISCGWKTGIAL-----LASQDKSFFFNQVPKTSDPISVLPDLSSSV 235
Query: 241 VTTPRSSVTCTSGITQQHQRLQRSSSSKTCQVEGCGKGARGASGRCISHGGGRRCQKLGC 300
+T P SSVTCTSGITQ+ Q QRSS+SK C+VEGCGKGARGASGRCISHGGGRRCQK GC
Sbjct: 236 ITAPVSSVTCTSGITQRQQPHQRSSNSKLCEVEGCGKGARGASGRCISHGGGRRCQKPGC 295
Query: 301 HKGAEGRTVYCKAHGGGRRCEYLGCTKSAEGRTDYCIAHGGGRRCSHEGCTRAARGKSGL 360
HKGAEGRTVYCK+HGGGRRCE+LGCTKSAEGRTD+CIAHGGGRRCS EGCTRAARGKSGL
Sbjct: 296 HKGAEGRTVYCKSHGGGRRCEFLGCTKSAEGRTDFCIAHGGGRRCSSEGCTRAARGKSGL 355
Query: 361 CIRHGGGKRCQKENCTKSAEGLSGLCISHGGGRRCQASGCTKGAQGSTMFCKAHGGGKRC 420
CIRHGGGKRCQKENCTKSAEGLSGLCISHGGGRRCQ+ GCTKGAQGSTMFCKAHGGGKRC
Sbjct: 356 CIRHGGGKRCQKENCTKSAEGLSGLCISHGGGRRCQSLGCTKGAQGSTMFCKAHGGGKRC 415
Query: 421 TAPGCTKGAEGSTSFCKGHGGGKRCAFQGGGVCTKSVHGGTNFCVAHGGGKRCAVPECTK 480
TAPGCTKGAEGST FCKGHGGGKRCAFQGGGVCTKSVHGGTNFCVAHGGGKRCAVPECTK
Sbjct: 416 TAPGCTKGAEGSTPFCKGHGGGKRCAFQGGGVCTKSVHGGTNFCVAHGGGKRCAVPECTK 475
Query: 481 SARGR 485
SARGR
Sbjct: 476 SARGR 480
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118489526|gb|ABK96565.1| unknown [Populus trichocarpa x Populus deltoides] | Back alignment and taxonomy information |
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| >gi|225426090|ref|XP_002276602.1| PREDICTED: uncharacterized protein LOC100255255 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449452266|ref|XP_004143880.1| PREDICTED: uncharacterized protein LOC101212238 isoform 1 [Cucumis sativus] gi|449452268|ref|XP_004143881.1| PREDICTED: uncharacterized protein LOC101212238 isoform 2 [Cucumis sativus] gi|449452270|ref|XP_004143882.1| PREDICTED: uncharacterized protein LOC101212238 isoform 3 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356513315|ref|XP_003525359.1| PREDICTED: uncharacterized protein LOC100776565 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356528910|ref|XP_003533040.1| PREDICTED: uncharacterized protein LOC100784837 isoform 1 [Glycine max] gi|356528912|ref|XP_003533041.1| PREDICTED: uncharacterized protein LOC100784837 isoform 2 [Glycine max] | Back alignment and taxonomy information |
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| >gi|224075038|ref|XP_002304530.1| predicted protein [Populus trichocarpa] gi|222841962|gb|EEE79509.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224053827|ref|XP_002297999.1| predicted protein [Populus trichocarpa] gi|222845257|gb|EEE82804.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|297836961|ref|XP_002886362.1| hypothetical protein ARALYDRAFT_474940 [Arabidopsis lyrata subsp. lyrata] gi|297332203|gb|EFH62621.1| hypothetical protein ARALYDRAFT_474940 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|30696974|ref|NP_176596.2| uncharacterized protein [Arabidopsis thaliana] gi|6692098|gb|AAF24563.1|AC007764_5 F22C12.10 [Arabidopsis thaliana] gi|332196079|gb|AEE34200.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 486 | ||||||
| TAIR|locus:2024638 | 646 | AT1G64140 "AT1G64140" [Arabido | 0.962 | 0.724 | 0.588 | 1.5e-145 | |
| TAIR|locus:2174789 | 634 | AT5G64550 "AT5G64550" [Arabido | 0.670 | 0.514 | 0.579 | 5.1e-104 | |
| TAIR|locus:2144796 | 546 | AT5G09670 "AT5G09670" [Arabido | 0.448 | 0.399 | 0.754 | 2.9e-99 | |
| TAIR|locus:2118116 | 1895 | WRKY19 [Arabidopsis thaliana ( | 0.403 | 0.103 | 0.633 | 1.7e-69 | |
| UNIPROTKB|P23490 | 312 | LOR "Loricrin" [Homo sapiens ( | 0.349 | 0.544 | 0.321 | 1.5e-10 | |
| UNIPROTKB|Q17QL6 | 360 | LOR "LOR protein" [Bos taurus | 0.382 | 0.516 | 0.319 | 2.5e-09 | |
| UNIPROTKB|Q6L8H1 | 288 | KRTAP5-4 "Keratin-associated p | 0.399 | 0.673 | 0.316 | 2.3e-08 | |
| UNIPROTKB|Q6L8H4 | 278 | KRTAP5-1 "Keratin-associated p | 0.395 | 0.690 | 0.321 | 3.5e-08 | |
| UNIPROTKB|G3MYC4 | 168 | G3MYC4 "Uncharacterized protei | 0.246 | 0.714 | 0.326 | 5.5e-08 | |
| WB|WBGene00001734 | 774 | grl-25 [Caenorhabditis elegans | 0.374 | 0.235 | 0.31 | 1.3e-07 |
| TAIR|locus:2024638 AT1G64140 "AT1G64140" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1422 (505.6 bits), Expect = 1.5e-145, P = 1.5e-145
Identities = 289/491 (58%), Positives = 333/491 (67%)
Query: 1 MDPSFQRLSFAANYSLNAFKTSGSSRQXXXXXXEDGTDTILRLDSPGSSNPHISASKGIK 60
M FQ ++FA N S N++K G S Q + DT LRLDS S P +S +KGIK
Sbjct: 1 MHSRFQNIAFAGNSSSNSYKILGRSLQVEV---PEAADTTLRLDSLAS--P-LSNAKGIK 54
Query: 61 RKWSLIDGSVHQQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKENEEESSMDLDLDF 120
RKW+LIDG+ +E EE SSMD++LDF
Sbjct: 55 RKWNLIDGA-----DPLLSLRLGHSSSSSDSKGSSATACTSLSSARETEEASSMDIELDF 109
Query: 121 TLHLGNDK-MPNPKKSAYSNMKGVEL-QPKVDLVLSLSTG-SPESGITSLHPSSSLLHFG 177
+LHLGN+K + KK A MKG+++ PK DL LSLS G S +S IT++ ++
Sbjct: 110 SLHLGNEKPTASNKKPANLKMKGLQVPSPKFDLELSLSGGGSCQSEITAVQQHANRFQSL 169
Query: 178 MEMPLLAGGTLNADDGSTSCGWKTGVSLPPLQTAPNKESRFFFDCALRTNDL-TANVHDL 236
+M L A N ++ +T CGW+ G LP LQ + +KE+ F + + A+V +L
Sbjct: 170 ADM-LRA----NNEESAT-CGWRQGFGLPTLQASSSKETSSFLGHIPKNVIIPAAHVLEL 223
Query: 237 XXXXXXXXXXXXXX-XXGITXXXX-XXXXXXXXKTCQVEGCGKGARGASGRCISHGGGRR 294
G++ K CQVEGC KGARGASGRCISHGGGRR
Sbjct: 224 SSNTAATTPISSGTCTSGLSQQLKPQLKNSSSSKLCQVEGCHKGARGASGRCISHGGGRR 283
Query: 295 CQKLGCHKGAEGRTVYCKAHGGGRRCEYLGCTKSAEGRTDYCIAHGGGRRCSHEGCTRAA 354
CQK GCHKGAEGRTVYCKAHGGGRRCE+LGCTKSAEGRTD+CIAHGGGRRCSHE CTRAA
Sbjct: 284 CQKHGCHKGAEGRTVYCKAHGGGRRCEFLGCTKSAEGRTDFCIAHGGGRRCSHEDCTRAA 343
Query: 355 RGKSGLCIRHGGGKRCQKENCTKSAEGLSGLCISHGGGRRCQASGCTKGAQGSTMFCKAH 414
RG+SGLCIRHGGGKRCQ+ENCTKSAEGLSGLCISHGGGRRCQ++GCTKGAQGSTMFCKAH
Sbjct: 344 RGRSGLCIRHGGGKRCQRENCTKSAEGLSGLCISHGGGRRCQSNGCTKGAQGSTMFCKAH 403
Query: 415 GGGKRCTAPGCTKGAEGSTSFCKGHGGGKRCAFQGGGVCTKSVHGGTNFCVAHGGGKRCA 474
GGGKRCT GCTKGAEGST FCKGHGGGKRCAFQG C+KSVHGGTNFCVAHGGGKRCA
Sbjct: 404 GGGKRCTHSGCTKGAEGSTPFCKGHGGGKRCAFQGDDPCSKSVHGGTNFCVAHGGGKRCA 463
Query: 475 VPECTKSARGR 485
VPECTKSARGR
Sbjct: 464 VPECTKSARGR 474
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| TAIR|locus:2174789 AT5G64550 "AT5G64550" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2144796 AT5G09670 "AT5G09670" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2118116 WRKY19 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P23490 LOR "Loricrin" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q17QL6 LOR "LOR protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q6L8H1 KRTAP5-4 "Keratin-associated protein 5-4" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q6L8H4 KRTAP5-1 "Keratin-associated protein 5-1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|G3MYC4 G3MYC4 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| WB|WBGene00001734 grl-25 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00