Citrus Sinensis ID: 011423

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480------
MDVRRRPLKVDDEVNKEKRPTSPTPKASDALPLPLYLTNAIFFTLFFSVAYYLLHRWREKIRNSTPLHVVTLSEIAAIVSLIASFIYLLGFFGIDFVQSFISRATPEAWDLEEDDSDIISRPPAPISITTLSSAQDEDVVQSVIDGSIPSYALESKLGDCRRAAAIRREALQKMTGRSLQGLPLDGFDYDSILGQCCEMPVGYVQIPVGIAGPLLLDGFEYSVPMATTEGCLVASTNRGCKAIYASGGAASMLLRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHIQCSIAGKNLYIRFCCTTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEATIKEEVVTKVLKTNVATLVELNTLKNLAGSAVAGALGGFNAHAANIVSAIFIATGQDPAQNVESSHCITMMEAINDGKDLHISVTMPSIEVVLSEVELNLLLSLHV
ccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccHHcccccHHHHHHHHHHHHHHHHcccccccccccccHHHHccccccccEEEEEcccEEEccEEEccEEEEEccccccccHHHHHHHHHHHHHHcccEEEEEccccEEEcEEEEEccHHHHHHHHHHccccccHHHHHHHHHccccccEEEEEEEEEcccEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHcccccEEEECcccccccccccEEEEEccccEEEEccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccHHHHHccccEEEEEEEEcccccEEEEEEcccEEEEEEEccccccccccc
******************************LPLPLYLTNAIFFTLFFSVAYYLLHRWREKIRNSTPLHVVTLSEIAAIVSLIASFIYLLGFFGIDFVQSFIS***********************************DVVQSVIDGSIPSYALESKLGDCRRAAAIRREALQKMTGRSLQGLPLDGFDYDSILGQCCEMPVGYVQIPVGIAGPLLLDGFEYSVPMATTEGCLVASTNRGCKAIYASGGAASMLLRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHIQCSIAGKNLYIRFCCTTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEATIKEEVVTKVLKTNVATLVELNTLKNLAGSAVAGALGGFNAHAANIVSAIFIATGQDPAQNVESSHCITMMEAINDGKDLHISVTMPSIEVVLSEVELNLLLSLH*
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MDVRRRPLKVDDEVNKEKRPTSPTPKASDALPLPLYLTNAIFFTLFFSVAYYLLHRWREKIRNSTPLHVVTLSEIAAIVSLIASFIYLLGFFGIDFVQSFISRATPEAWDLEEDDSDIISRPPAPISITTLSSAQDEDVVQSVIDGSIPSYALESKLGDCRRAAAIRREALQKMTGRSLQGLPLDGFDYDSILGQCCEMPVGYVQIPVGIAGPLLLDGFEYSVPMATTEGCLVASTNRGCKAIYASGGAASMLLRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHIQCSIAGKNLYIRFCCTTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEATIKEEVVTKVLKTNVATLVELNTLKNLAGSAVAGALGGFNAHAANIVSAIFIATGQDPAQNVESSHCITMMEAINDGKDLHISVTMPSIEVVLSEVELNLLLSLHV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 Catalyzes the synthesis of mevalonate. The specific precursor of all isoprenoid compounds present in plants.probableO64966
3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 Catalyzes the synthesis of mevalonate. The specific precursor of all isoprenoid compounds present in plants.probableQ41438
3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 Catalyzes the synthesis of mevalonate. The specific precursor of all isoprenoid compounds present in plants.probableQ00583

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.1.-.-Acting on the CH-OH group of donors.probable
1.1.1.-15-hydroxyprostaglandin dehydrogenase (NAD(+)).probable
1.1.1.34Hydroxymethylglutaryl-CoA reductase (NADPH).probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2R4F, chain A
Confidence level:very confident
Coverage over the Query: 133-481
View the alignment between query and template
View the model in PyMOL